BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2676
(321 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 342 bits (876), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 155/304 (50%), Positives = 215/304 (70%), Gaps = 2/304 (0%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D L D++Y+ + +IG GAYG VFKARDL+N G +VA+K++RV+ E+G+P+ST+RE++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
+L+ L+TFEHPN+VR FDV + +R + L+FEHVDQDL +Y++K P PG+
Sbjct: 64 VLRHLETFEHPNVVRLFDVC--TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 121
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+K++ Q+L+G+DFLHSHR++HRDLKPQN+L+T +G +K+ADFGLA+ + + M LTSVVV
Sbjct: 122 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN 254
TLWYRAPE+LL Y TPVD+WS+GC+ AEM+R PLF S++V+QL I VIG P
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+WP +++L +F S D LL LTFNPA RISA AL HPYF+
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 315 EKEN 318
+ E
Sbjct: 302 DLER 305
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 341 bits (875), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 157/304 (51%), Positives = 215/304 (70%), Gaps = 2/304 (0%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D L D++Y+ + +IG GAYG VFKARDL+N G +VA+K++RV+ E+G+P+ST+RE++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
+L+ L+TFEHPN+VR FDV + E LT L+FEHVDQDL +Y++K P PG+
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLT--LVFEHVDQDLTTYLDKVPEPGVPTET 121
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+K++ Q+L+G+DFLHSHR++HRDLKPQN+L+T +G +K+ADFGLA+ + + M LTSVVV
Sbjct: 122 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN 254
TLWYRAPE+LL Y TPVD+WS+GC+ AEM+R PLF S++V+QL I VIG P
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+WP +++L +F S D LL LTFNPA RISA AL HPYF+
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 315 EKEN 318
+ E
Sbjct: 302 DLER 305
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 340 bits (872), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 213/300 (71%), Gaps = 2/300 (0%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D L D++Y+ + +IG GAYG VFKARDL+N G +VA+K++RV+ E+G+P+ST+RE++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
+L+ L+TFEHPN+VR FDV + E LT L+FEHVDQDL +Y++K P PG+
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLT--LVFEHVDQDLTTYLDKVPEPGVPTET 121
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+K++ Q+L+G+DFLHSHR++HRDLKPQN+L+T +G +K+ADFGLA+ + + M LTSVVV
Sbjct: 122 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN 254
TLWYRAPE+LL Y TPVD+WS+GC+ AEM+R PLF S++V+QL I VIG P
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+WP +++L +F S D LL LTFNPA RISA AL HPYF+
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 326 bits (835), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 210/302 (69%), Gaps = 3/302 (0%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
+ +Y+ + +IG GAYGTV+KARD + G++VA+K +RV E+G+P+ST+RE+++L++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGEEGLPISTVREVALLRR 59
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
L+ FEHPN+VR DV + +R + V L+FEHVDQDL +Y++K PPPGL A +K+L
Sbjct: 60 LEAFEHPNVVRLMDVCATS--RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
RQ L+G+DFLH++ I+HRDLKP+N+L+T G +K+ADFGLA+ + Y M L VVVTLWY
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWY 177
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
RAPE+LL Y TPVD+WS+GC+ AEM+R PLFC ++E +QL IF +IG P ++WP
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 237
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKEN 318
++SL +F ++ + LL MLTFNP RISA AL+H Y + E
Sbjct: 238 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 297
Query: 319 EP 320
P
Sbjct: 298 NP 299
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 325 bits (833), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 210/302 (69%), Gaps = 3/302 (0%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
+ +Y+ + +IG GAYGTV+KARD + G++VA+K +RV E+G+P+ST+RE+++L++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGEEGLPISTVREVALLRR 59
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
L+ FEHPN+VR DV + +R + V L+FEHVDQDL +Y++K PPPGL A +K+L
Sbjct: 60 LEAFEHPNVVRLMDVCATS--RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
RQ L+G+DFLH++ I+HRDLKP+N+L+T G +K+ADFGLA+ + Y M L VVVTLWY
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWY 177
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
RAPE+LL Y TPVD+WS+GC+ AEM+R PLFC ++E +QL IF +IG P ++WP
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 237
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKEN 318
++SL +F ++ + LL MLTFNP RISA AL+H Y + E
Sbjct: 238 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 297
Query: 319 EP 320
P
Sbjct: 298 NP 299
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 324 bits (831), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 210/302 (69%), Gaps = 3/302 (0%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
+ +Y+ + +IG GAYGTV+KARD + G++VA+K +RV E+G+P+ST+RE+++L++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGEEGLPISTVREVALLRR 59
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
L+ FEHPN+VR DV + +R + V L+FEHVDQDL +Y++K PPPGL A +K+L
Sbjct: 60 LEAFEHPNVVRLMDVCATS--RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
RQ L+G+DFLH++ I+HRDLKP+N+L+T G +K+ADFGLA+ + Y M L VVVTLWY
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWY 177
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
RAPE+LL Y TPVD+WS+GC+ AEM+R PLFC ++E +QL IF +IG P ++WP
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 237
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKEN 318
++SL +F ++ + LL MLTFNP RISA AL+H Y + E
Sbjct: 238 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 297
Query: 319 EP 320
P
Sbjct: 298 NP 299
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 148/305 (48%), Positives = 209/305 (68%), Gaps = 6/305 (1%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVK---LNEDGIPMSTLREISI 75
+ +Y+ + +IG GAYGTV+KARD + G++VA+K +RV G+P+ST+RE+++
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
L++L+ FEHPN+VR DV + +R + V L+FEHVDQDL +Y++K PPPGL A +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATS--RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 136 KELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVT 195
K+L RQ L+G+DFLH++ I+HRDLKP+N+L+T G +K+ADFGLA+ + Y M LT VVVT
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVT 182
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
LWYRAPE+LL Y TPVD+WS+GC+ AEM+R PLFC ++E +QL IF +IG P ++
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
WP ++SL +F ++ + LL MLTFNP RISA AL+H Y +
Sbjct: 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
Query: 316 KENEP 320
E P
Sbjct: 303 DEGNP 307
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 250 bits (639), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 193/299 (64%), Gaps = 18/299 (6%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY +L ++G G YG V+KA+D Q G VA+K++R+ ++GIP + +REIS+LK+L
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQ--GRIVALKRIRLDAEDEGIPSTAIREISLLKEL-- 76
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
HPNIV DVIH ER LT L+FE +++DL +++ GL S++K Q
Sbjct: 77 -HHPNIVSLIDVIHS-----ERCLT--LVFEFMEKDLKKVLDENKT-GLQDSQIKIYLYQ 127
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM-LTSVVVTLWYRA 200
+L+GV H HRI+HRDLKPQNLLI G LK+ADFGLA+ F + T VVTLWYRA
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 201 PEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
P++L+ + Y T VDIWSIGC+ AEM PLF T+ +QL IF ++GTP+ EWP+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247
Query: 260 ISL-MWS--SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
L +W +F+ + K +S+I C + LL +ML F+P RISA DA+ HPYFK+
Sbjct: 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 250 bits (639), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 193/299 (64%), Gaps = 18/299 (6%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY +L ++G G YG V+KA+D Q G VA+K++R+ ++GIP + +REIS+LK+L
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQ--GRIVALKRIRLDAEDEGIPSTAIREISLLKEL-- 76
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
HPNIV DVIH ER LT L+FE +++DL +++ GL S++K Q
Sbjct: 77 -HHPNIVSLIDVIHS-----ERCLT--LVFEFMEKDLKKVLDENKT-GLQDSQIKIYLYQ 127
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM-LTSVVVTLWYRA 200
+L+GV H HRI+HRDLKPQNLLI G LK+ADFGLA+ F + T VVTLWYRA
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 201 PEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
P++L+ + Y T VDIWSIGC+ AEM PLF T+ +QL IF ++GTP+ EWP+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247
Query: 260 ISL-MWS--SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
L +W +F+ + K +S+I C + LL +ML F+P RISA DA+ HPYFK+
Sbjct: 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 245 bits (626), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/299 (44%), Positives = 186/299 (62%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 59
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FEHV QDL ++M+ G+ +K
Sbjct: 60 --HPNIVKLLDVIHTENKL--------YLVFEHVHQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 244 bits (624), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/299 (44%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 63
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FEHVDQDL +M+ G+ +K
Sbjct: 64 --HPNIVKLLDVIHTENKL--------YLVFEHVDQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 241 bits (616), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 183/298 (61%), Gaps = 17/298 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY L +IG G YG V+KA++ N G A+KK+R++ ++GIP +T+REISILK+L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEKEDEGIPSTTIREISILKEL-- 57
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H NIV+ +DVIH + +R + L+FEH+DQDL ++ C GL + K Q
Sbjct: 58 -KHSNIVKLYDVIH----TKKR---LVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQ 108
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM-LTSVVVTLWYRA 200
+L G+ + H R++HRDLKPQNLLI R G LKIADFGLA+ F + T VVTLWYRA
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 201 PEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
P++L+ + Y T +DIWS+GC+ AEM PLF +E +QL IFR++GTP+ WP
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 260 ISLMW--SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
L +F Y + + + LL ML +P RI+A ALEH YFKE
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 183/298 (61%), Gaps = 17/298 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY L +IG G YG V+KA++ N G A+KK+R++ ++GIP +T+REISILK+L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEKEDEGIPSTTIREISILKEL-- 57
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H NIV+ +DVIH + +R + L+FEH+DQDL ++ C GL + K Q
Sbjct: 58 -KHSNIVKLYDVIH----TKKR---LVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQ 108
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM-LTSVVVTLWYRA 200
+L G+ + H R++HRDLKPQNLLI R G LKIADFGLA+ F + T VVTLWYRA
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 201 PEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
P++L+ + Y T +DIWS+GC+ AEM PLF +E +QL IFR++GTP+ WP
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 260 ISLMW--SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
L +F Y + + + LL ML +P RI+A ALEH YFKE
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 183/298 (61%), Gaps = 17/298 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY L +IG G YG V+KA++ N G A+KK+R++ ++GIP +T+REISILK+L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEKEDEGIPSTTIREISILKEL-- 57
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H NIV+ +DVIH + +R + L+FEH+DQDL ++ C GL + K Q
Sbjct: 58 -KHSNIVKLYDVIH----TKKR---LVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQ 108
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM-LTSVVVTLWYRA 200
+L G+ + H R++HRDLKPQNLLI R G LKIADFGLA+ F + T +VTLWYRA
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRA 168
Query: 201 PEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
P++L+ + Y T +DIWS+GC+ AEM PLF +E +QL IFR++GTP+ WP
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 260 ISLMW--SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
L +F Y + + + LL ML +P RI+A ALEH YFKE
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 240 bits (613), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 185/301 (61%), Gaps = 17/301 (5%)
Query: 20 GDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQL 79
G + + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 80 DTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
+ HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 60 N---HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSY 108
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLW 197
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLW
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 198 YRAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW 256
YRAPEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 257 PENISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
P S+ SF ++++ FS + SLL ML ++P RISA AL HP+F+
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Query: 315 E 315
+
Sbjct: 289 D 289
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 240 bits (612), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 60
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 61 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 67
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 68 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 60
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 61 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 59
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 60 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 60
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 61 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 67
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 68 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 59
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 60 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 61
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 62 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 171
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 64
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 65 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 174
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 235 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 63
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL ++M+ G+ +K
Sbjct: 64 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 237 bits (605), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 60
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 61 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 60
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 61 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 59
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 60 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 169
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 60
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 61 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 60
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 61 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+ K+R+ +G+P + +REIS+LK+L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN- 60
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 61 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+ K+R+ +G+P + +REIS+LK+L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN- 59
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 60 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + T VVTLWYR
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 237 bits (604), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 59
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 60 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 169
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 61
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 62 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 64
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 65 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 174
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 235 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 63
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 64 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 61
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 62 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 63
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 64 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 62
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 63 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 237 bits (604), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 62
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 63 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 60
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 61 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKP+NLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 61
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 62 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKP+NLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 62
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + QDL +M+ G+ +K
Sbjct: 63 --HPNIVKLLDVIHTENKL--------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKP+NLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 182/299 (60%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 62
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + DL +M+ G+ +K
Sbjct: 63 --HPNIVKLLDVIHTENKL--------YLVFEFLSMDLKDFMDASALTGIPLPLIKSYLF 112
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 234 bits (598), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 182/299 (60%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 63
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + DL +M+ G+ +K
Sbjct: 64 --HPNIVKLLDVIHTENKL--------YLVFEFLSMDLKDFMDASALTGIPLPLIKSYLF 113
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKPQNLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 233 bits (595), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 182/299 (60%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 61
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + DL +M+ G+ +K
Sbjct: 62 --HPNIVKLLDVIHTENKL--------YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKP+NLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 233 bits (595), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 182/299 (60%), Gaps = 17/299 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+ + ++ +IG G YG V+KAR+ + G VA+KK+R+ +G+P + +REIS+LK+L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 63
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNIV+ DVIH +N L YL+FE + DL +M+ G+ +K
Sbjct: 64 --HPNIVKLLDVIHTENKL--------YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYR 199
Q+L+G+ F HSHR++HRDLKP+NLLI G +K+ADFGLA+ F + VVTLWYR
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 200 APEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APEILL Y T VDIWS+GC+ AEM LF +E++QL IFR +GTP WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 259 NISL--MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
S+ SF ++++ FS + SLL ML ++P RISA AL HP+F++
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY++L +IG G YGTVFKA++ + VA+K++R+ +++G+P S LREI +LK+L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETH-EIVALKRVRLDDDDEGVPSSALREICLLKEL-- 58
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H NIVR DV+H SD++ + L+FE DQDL Y + C L VK Q
Sbjct: 59 -KHKNIVRLHDVLH----SDKK---LTLVFEFCDQDLKKYFDSCNG-DLDPEIVKSFLFQ 109
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-VVTLWYRA 200
+LKG+ F HS ++HRDLKPQNLLI R G LK+ADFGLA+ F + S VVTLWYR
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 201 PEILLNLG-YGTPVDIWSIGCVMAEMWRLV-PLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
P++L Y T +D+WS GC+ AE+ PLF + +QLK IFR++GTP+ +WP
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANS----LLESMLTFNPADRISAADALEHPYFK 314
L ++ Y + ++ K N+ LL+++L NP RISA +AL+HPYF
Sbjct: 230 MTKL--PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
Query: 315 E 315
+
Sbjct: 288 D 288
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 224 bits (570), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY++L +IG G YGTVFKA++ + VA+K++R+ +++G+P S LREI +LK+L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETH-EIVALKRVRLDDDDEGVPSSALREICLLKEL-- 58
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H NIVR DV+H SD++ + L+FE DQDL Y + C L VK Q
Sbjct: 59 -KHKNIVRLHDVLH----SDKK---LTLVFEFCDQDLKKYFDSCNG-DLDPEIVKSFLFQ 109
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-VVTLWYRA 200
+LKG+ F HS ++HRDLKPQNLLI R G LK+A+FGLA+ F + S VVTLWYR
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 201 PEILLNLG-YGTPVDIWSIGCVMAEMWRL-VPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
P++L Y T +D+WS GC+ AE+ PLF + +QLK IFR++GTP+ +WP
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANS----LLESMLTFNPADRISAADALEHPYFK 314
L ++ Y + ++ K N+ LL+++L NP RISA +AL+HPYF
Sbjct: 230 MTKL--PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
Query: 315 E 315
+
Sbjct: 288 D 288
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/313 (39%), Positives = 182/313 (58%), Gaps = 39/313 (12%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
++ +L ++G G Y TV+K + + G YVA+K++++ +E+G P + +REIS++K+L
Sbjct: 6 QFKQLEKLGNGTYATVYKGLN-KTTGVYVALKEVKLD-SEEGTPSTAIREISLMKEL--- 60
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK----CPPPGLSASKVKEL 138
+H NIVR +DVIH E LT L+FE +D DL YM+ P GL + VK
Sbjct: 61 KHENIVRLYDVIHT-----ENKLT--LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLW 197
Q+L+G+ F H ++I+HRDLKPQNLLI + G LK+ DFGLA+ F + +S VVTLW
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 198 YRAPEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW 256
YRAP++L+ + Y T +DIWS GC++AEM PLF + + EQLK IF ++GTP+ + W
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 257 PENISL--------------MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRI 302
P L + + ++K MD L +L NP R+
Sbjct: 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMD-------FLHGLLQLNPDMRL 286
Query: 303 SAADALEHPYFKE 315
SA AL HP+F E
Sbjct: 287 SAKQALHHPWFAE 299
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 178/308 (57%), Gaps = 23/308 (7%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
+Y + ++G G YG V+KA D VA+K++R++ E+G+P + +RE+S+LK+L
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVT-NETVAIKRIRLEHEEEGVPGTAIREVSLLKEL--- 90
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
+H NI+ VIH N ++LIFE+ + DL YM+K P +S +K Q+
Sbjct: 91 QHRNIIELKSVIHHN-------HRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQL 141
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGG-----LKIADFGLAKTFDYDM-MLTSVVVTL 196
+ GV+F HS R +HRDLKPQNLL++ + LKI DFGLA+ F + T ++TL
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITL 201
Query: 197 WYRAPEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
WYR PEILL + Y T VDIWSI C+ AEM PLF +E++QL IF V+G P
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261
Query: 256 WPENISLM-W-SSFEQY-SKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
WP +L W SF ++ K + + LL +ML +P RISA +ALEHPY
Sbjct: 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
Query: 313 FKEKENEP 320
F + +P
Sbjct: 322 FSHNDFDP 329
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 203 bits (517), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 177/299 (59%), Gaps = 26/299 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
Y +L ++G G Y TV+K + + N VA+K++R++ +E+G P + +RE+S+LK L +
Sbjct: 4 YIKLDKLGEGTYATVYKGKS-KLTDNLVALKEIRLE-HEEGAPCTAIREVSLLKDL---K 58
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV D+IH E+ LT L+FE++D+DL Y++ C ++ VK Q+L
Sbjct: 59 HANIVTLHDIIHT-----EKSLT--LVFEYLDKDLKQYLDDCGNI-INMHNVKLFLFQLL 110
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-----TFDYDMMLTSVVVTLWY 198
+G+ + H +++HRDLKPQNLLI G LK+ADFGLA+ T YD + VVTLWY
Sbjct: 111 RGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD----NEVVTLWY 166
Query: 199 RAPEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
R P+ILL + Y T +D+W +GC+ EM PLF ST EQL IFR++GTP+ WP
Sbjct: 167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWP 226
Query: 258 ---ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
N ++ +Y A + S LL +L F +RISA DA++HP+F
Sbjct: 227 GILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 174/302 (57%), Gaps = 20/302 (6%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN---EDGIPMSTLREISILKQ 78
K+Y++L +G G + TV+KARD +N VA+KK+++ +DGI + LREI +L++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARD-KNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 79 LDTFEHPNIVRFFDVI-HQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE 137
L HPNI+ D H++ +S L+F+ ++ DL + K L+ S +K
Sbjct: 69 L---SHPNIIGLLDAFGHKSNIS--------LVFDFMETDL-EVIIKDNSLVLTPSHIKA 116
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY-DMMLTSVVVTL 196
L+G+++LH H I+HRDLKP NLL+ G LK+ADFGLAK+F + VVT
Sbjct: 117 YMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR 176
Query: 197 WYRAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
WYRAPE+L YG VD+W++GC++AE+ VP ++++QL IF +GTP+ +
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ 236
Query: 256 WPENISLM-WSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
WP+ SL + +F+ + + IF L++ + FNP RI+A AL+ YF
Sbjct: 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296
Query: 315 EK 316
+
Sbjct: 297 NR 298
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 170/306 (55%), Gaps = 23/306 (7%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
KY++L +IG G +G VFKAR + G VA+KK+ ++ ++G P++ LREI IL+ L
Sbjct: 19 KYEKLAKIGQGTFGEVFKARH-RKTGQKVALKKVLMENEKEGFPITALREIKILQLL--- 74
Query: 83 EHPNIVRFFDVIHQNILSDER-YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N+V ++ R ++YL+F+ + DL + + S++K + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQM 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-----MLTSVVVTL 196
+L G+ ++H ++I+HRD+K N+LITR G LK+ADFGLA+ F + VVTL
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 197 WYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
WYR PE+LL YG P+D+W GC+MAEMW P+ +TE QL I ++ G+ +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 253
Query: 256 WP--------ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
WP E + L+ ++ K A D A L++ +L +PA RI + DA
Sbjct: 254 WPNVDNYELYEKLELV-KGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 310
Query: 308 LEHPYF 313
L H +F
Sbjct: 311 LNHDFF 316
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 170/306 (55%), Gaps = 23/306 (7%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
KY++L +IG G +G VFKAR + G VA+KK+ ++ ++G P++ LREI IL+ L
Sbjct: 19 KYEKLAKIGQGTFGEVFKARH-RKTGQKVALKKVLMENEKEGFPITALREIKILQLL--- 74
Query: 83 EHPNIVRFFDVIHQNILSDERYL-TVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N+V ++ R ++YL+F+ + DL + + S++K + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-KFTLSEIKRVMQM 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-----MLTSVVVTL 196
+L G+ ++H ++I+HRD+K N+LITR G LK+ADFGLA+ F + VVTL
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 197 WYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
WYR PE+LL YG P+D+W GC+MAEMW P+ +TE QL I ++ G+ +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 253
Query: 256 WP--------ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
WP E + L+ ++ K A D A L++ +L +PA RI + DA
Sbjct: 254 WPNVDNYELYEKLELVKGQ-KRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 310
Query: 308 LEHPYF 313
L H +F
Sbjct: 311 LNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 170/306 (55%), Gaps = 23/306 (7%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
KY++L +IG G +G VFKAR + G VA+KK+ ++ ++G P++ LREI IL+ L
Sbjct: 18 KYEKLAKIGQGTFGEVFKARH-RKTGQKVALKKVLMENEKEGFPITALREIKILQLL--- 73
Query: 83 EHPNIVRFFDVIHQNILSDERYL-TVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N+V ++ R ++YL+F+ + DL + + S++K + +
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-KFTLSEIKRVMQM 132
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-----MLTSVVVTL 196
+L G+ ++H ++I+HRD+K N+LITR G LK+ADFGLA+ F + VVTL
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 197 WYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
WYR PE+LL YG P+D+W GC+MAEMW P+ +TE QL I ++ G+ +
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252
Query: 256 WP--------ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
WP E + L+ ++ K A D A L++ +L +PA RI + DA
Sbjct: 253 WPNVDNYELYEKLELVKGQ-KRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 309
Query: 308 LEHPYF 313
L H +F
Sbjct: 310 LNHDFF 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 170/306 (55%), Gaps = 23/306 (7%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
KY++L +IG G +G VFKAR + G VA+KK+ ++ ++G P++ LREI IL+ L
Sbjct: 19 KYEKLAKIGQGTFGEVFKARH-RKTGQKVALKKVLMENEKEGFPITALREIKILQLL--- 74
Query: 83 EHPNIVRFFDVIHQNILSDERYL-TVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N+V ++ R ++YL+F+ + DL + + S++K + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQM 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-----MLTSVVVTL 196
+L G+ ++H ++I+HRD+K N+LITR G LK+ADFGLA+ F + VVTL
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 197 WYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
WYR PE+LL YG P+D+W GC+MAEMW P+ +TE QL I ++ G+ +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 253
Query: 256 WP--------ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
WP E + L+ ++ K A D A L++ +L +PA RI + DA
Sbjct: 254 WPNVDNYELYEKLELV-KGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 310
Query: 308 LEHPYF 313
L H +F
Sbjct: 311 LNHDFF 316
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 19 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 75
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 76 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKTQ---HLSNDHIC 127
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEY 187
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 308 LAHPYLEQ 315
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 167/308 (54%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 88
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 89 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 143
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 201
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 261
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 262 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 321
Query: 316 --KENEPL 321
++EP+
Sbjct: 322 HDPDDEPV 329
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 169/317 (53%), Gaps = 23/317 (7%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 21 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 77
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 78 L---AFRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 129
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 250 SQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 308 LEHPY---FKEKENEPL 321
L HPY + + +EP+
Sbjct: 310 LAHPYLAQYYDPSDEPI 326
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 19 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 75
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 76 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 127
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 308 LAHPYLEQ 315
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 167/308 (54%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 84
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 85 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 139
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 197
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 258 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 316 --KENEPL 321
++EP+
Sbjct: 318 HDPDDEPV 325
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 167/308 (54%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 74
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 75 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCA--KLTDDHVQFLIYQ 129
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 187
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 316 --KENEPL 321
++EP+
Sbjct: 308 HDPDDEPV 315
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 167/308 (54%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y +L IG GAYG V A D K VA+KK+ TLREI IL
Sbjct: 39 FDVG-PRYTQLQYIGEGAYGMVSSAYDHVRKTR-VAIKKIS-PFEHQTYCQRTLREIQIL 95
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H N++ D++ + L R VY++ + ++ DL ++ LS +
Sbjct: 96 LR---FRHENVIGIRDILRASTLEAMR--DVYIVQDLMETDLYKLLKS---QQLSNDHIC 147
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT----FDYDMMLTSV 192
Q+L+G+ ++HS ++HRDLKP NLLI LKI DFGLA+ D+ LT
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 252 SMNEWPENISLMWSSFEQ----YSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I++ ++ Q +KVA++ +F SKA LL+ MLTFNP RI+ +A
Sbjct: 268 SQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEA 327
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 328 LAHPYLEQ 335
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 167/308 (54%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 74
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 75 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 129
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 187
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 316 --KENEPL 321
++EP+
Sbjct: 308 HDPDDEPV 315
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 167/308 (54%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 98
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 99 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 153
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 211
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 316 --KENEPL 321
++EP+
Sbjct: 332 HDPDDEPV 339
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 84
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 85 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 139
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM--TGYVATRWYRAP 197
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 316 --KENEPL 321
++EP+
Sbjct: 318 HDPDDEPV 325
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 167/308 (54%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 97
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 98 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 152
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 210
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 271 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
Query: 316 --KENEPL 321
++EP+
Sbjct: 331 HDPDDEPV 338
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 167/308 (54%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 23 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 79
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL + KC LS +
Sbjct: 80 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLL-KCQ--HLSNDHIC 131
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 312 LAHPYLEQ 319
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 80
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 81 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 135
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM--TGYVATRWYRAP 193
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 316 --KENEPL 321
++EP+
Sbjct: 314 HDPDDEPV 321
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L IG GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 83
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 84 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 138
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWYRAP 196
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 316 --KENEPL 321
++EP+
Sbjct: 317 HDPDDEPV 324
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 23 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYXQRTLREIKIL 79
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 80 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 131
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 312 LAHPYLEQ 319
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 163/306 (53%), Gaps = 20/306 (6%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
Y +L +G GAYG V A D + G VA+KKL + RE+ +LK +
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRT-GAKVAIKKLYRPFQSELFAKRAYRELRLLKHM---R 82
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H N++ DV + D+ + YL+ + DLG M+ L +++ L QML
Sbjct: 83 HENVIGLLDVFTPDETLDD-FTDFYLVMPFMGTDLGKLMKH---EKLGEDRIQFLVYQML 138
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
KG+ ++H+ IIHRDLKP NL + LKI DFGLA+ D +M VVT WYRAPE+
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM--XGXVVTRWYRAPEV 196
Query: 204 LLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN-----EWP 257
+LN + Y VDIWS+GC+MAEM LF S ++QLK I +V GTP +
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD 256
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK--- 314
E + M + K F++I + A +LLE ML + R++A +AL HPYF+
Sbjct: 257 EAKNYM-KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315
Query: 315 EKENEP 320
+ E+EP
Sbjct: 316 DTEDEP 321
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 83
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 84 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 138
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWYRAP 196
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 316 --KENEPL 321
++EP+
Sbjct: 317 HDPDDEPV 324
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 23 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 79
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 80 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 131
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 312 LAHPYLEQ 319
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 19 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 75
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 76 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 127
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 308 LAHPYLEQ 315
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 89
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 90 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 144
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWYRAP 202
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 316 --KENEPL 321
++EP+
Sbjct: 323 HDPDDEPV 330
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 27 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 83
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 84 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 135
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 195
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 196 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 255
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 256 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 315
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 316 LAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 19 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 75
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 76 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 127
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 308 LAHPYLEQ 315
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 21/318 (6%)
Query: 16 SLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISI 75
+ D+GD+ Y+ + IG GAYG V AR + G VA+KK+ + TLRE+ I
Sbjct: 49 TFDVGDE-YEIIETIGNGAYGVVSSARR-RLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 106
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
LK F+H NI+ D++ + E + +VY++ + ++ DL + P L+ V
Sbjct: 107 LKH---FKHDNIIAIKDILRPTVPYGE-FKSVYVVLDLMESDLHQIIHSSQP--LTLEHV 160
Query: 136 KELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-----DYDMMLT 190
+ Q+L+G+ ++HS ++IHRDLKP NLL+ LKI DFG+A+ ++ +T
Sbjct: 161 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 191 SVVVTLWYRAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIG 249
V T WYRAPE++L+L Y +D+WS+GC+ EM LF V QL+ I V+G
Sbjct: 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 280
Query: 250 TPS----MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAA 305
TPS E + S V + ++ +A SLL ML F P+ RISAA
Sbjct: 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA 340
Query: 306 DALEHPY---FKEKENEP 320
AL HP+ + + ++EP
Sbjct: 341 AALRHPFLAKYHDPDDEP 358
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 24 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 80
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 81 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 132
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 192
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 313 LAHPYLEQ 320
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 25 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 81
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 82 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 133
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 193
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 253
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 254 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 313
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 314 LAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 16 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 72
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 73 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 124
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 184
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 244
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 245 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 304
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 305 LAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 23 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 79
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 80 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 131
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 312 LAHPYLEQ 319
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/308 (38%), Positives = 164/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 39 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 95
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VYL+ + DL ++ LS +
Sbjct: 96 LR---FRHENIIGINDIIRAPTI--EQMKDVYLVTHLMGADLYKLLKT---QHLSNDHIC 147
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 268 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 328 LAHPYLEQ 335
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 19 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 75
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 76 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 127
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 308 LAHPYLEQ 315
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--AGFVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--AGFVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 39 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 95
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 96 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 147
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 268 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 328 LAHPYLEQ 335
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 17 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 73
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 74 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 125
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 245
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 246 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 306 LAHPYLEQ 313
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGXVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 83
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 84 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 138
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 196
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 316 --KENEPL 321
++EP+
Sbjct: 317 HDPDDEPV 324
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 77
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 78 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 132
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 190
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 250
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 251 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 310
Query: 316 --KENEPL 321
++EP+
Sbjct: 311 HDPDDEPV 318
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 21 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 77
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 78 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 129
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 250 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 310 LAHPYLEQ 317
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 83
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 84 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 138
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 196
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 316 --KENEPL 321
++EP+
Sbjct: 317 HDPDDEPV 324
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 85
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 86 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 140
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 198
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 316 --KENEPL 321
++EP+
Sbjct: 319 HDPDDEPV 326
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 80
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 81 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 135
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 193
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 316 --KENEPL 321
++EP+
Sbjct: 314 HDPDDEPV 321
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 74
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 75 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 129
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M V T WYRAP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--AGFVATRWYRAP 187
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 316 --KENEPL 321
++EP+
Sbjct: 308 HDPDDEPV 315
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 80
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 81 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 135
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 193
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 316 --KENEPL 321
++EP+
Sbjct: 314 HDPDDEPV 321
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 89
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 90 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 144
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 202
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 316 --KENEPL 321
++EP+
Sbjct: 323 HDPDDEPV 330
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 101
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 102 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 156
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 214
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 316 --KENEPL 321
++EP+
Sbjct: 335 HDPDDEPV 342
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 84
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 85 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 139
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 197
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 316 --KENEPL 321
++EP+
Sbjct: 318 HDPDDEPV 325
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM-- 90
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 91 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 145
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 203
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 316 --KENEPL 321
++EP+
Sbjct: 324 HDPDDEPV 331
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 97
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 98 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 152
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 210
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 271 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
Query: 316 --KENEPL 321
++EP+
Sbjct: 331 HDPDDEPV 338
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 84
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 85 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 139
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 197
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 316 --KENEPL 321
++EP+
Sbjct: 318 HDPDDEPV 325
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 80
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 81 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 135
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 193
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 316 --KENEPL 321
++EP+
Sbjct: 314 HDPDDEPV 321
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 75
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 76 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 130
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 188
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 316 --KENEPL 321
++EP+
Sbjct: 309 HDPDDEPV 316
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 74
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 75 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 129
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 187
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 316 --KENEPL 321
++EP+
Sbjct: 308 HDPDDEPV 315
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 76
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 77 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 131
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 189
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 249
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 250 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 309
Query: 316 --KENEPL 321
++EP+
Sbjct: 310 HDPDDEPV 317
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 90
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 91 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 145
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 203
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 316 --KENEPL 321
++EP+
Sbjct: 324 HDPDDEPV 331
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 90
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 91 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 145
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 203
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 316 --KENEPL 321
++EP+
Sbjct: 324 HDPDDEPV 331
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 98
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 99 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 153
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M V T WYRAP
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--XGXVATRWYRAP 211
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 316 --KENEPL 321
++EP+
Sbjct: 332 HDPDDEPV 339
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + ++ L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 98
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 99 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 153
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 211
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 272 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 316 --KENEPL 321
++EP+
Sbjct: 332 HDPDDEPV 339
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 21/318 (6%)
Query: 16 SLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISI 75
+ D+GD+ Y+ + IG GAYG V AR + G VA+KK+ + TLRE+ I
Sbjct: 50 TFDVGDE-YEIIETIGNGAYGVVSSARR-RLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 107
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
LK F+H NI+ D++ + E + +VY++ + ++ DL + P L+ V
Sbjct: 108 LKH---FKHDNIIAIKDILRPTVPYGE-FKSVYVVLDLMESDLHQIIHSSQP--LTLEHV 161
Query: 136 KELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-----DYDMMLT 190
+ Q+L+G+ ++HS ++IHRDLKP NLL+ LKI DFG+A+ ++ +T
Sbjct: 162 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 191 SVVVTLWYRAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIG 249
V T WYRAPE++L+L Y +D+WS+GC+ EM LF V QL+ I V+G
Sbjct: 222 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 281
Query: 250 TPS----MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAA 305
TPS E + S V + ++ +A SLL ML F P+ RISAA
Sbjct: 282 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA 341
Query: 306 DALEHPY---FKEKENEP 320
AL HP+ + + ++EP
Sbjct: 342 AALRHPFLAKYHDPDDEP 359
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 75
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 76 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 130
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 188
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 316 --KENEPL 321
++EP+
Sbjct: 309 HDPDDEPV 316
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA++K+ TLREI IL
Sbjct: 23 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIRKIS-PFEHQTYCQRTLREIKIL 79
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 80 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 131
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 312 LAHPYLEQ 319
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 169/317 (53%), Gaps = 23/317 (7%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 21 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 77
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 78 L---AFRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 129
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 250 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 308 LEHPY---FKEKENEPL 321
L HPY + + +EP+
Sbjct: 310 LAHPYLAQYYDPSDEPI 326
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 171/311 (54%), Gaps = 22/311 (7%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V + D+++ G +A+KKL T RE+ +LK +
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKS-GLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 107
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 108 -KHENVIGLLDVF-TPATSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 162
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 220
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS---MNEWP 257
EI+LN + Y VDIWS+GC+MAE+ LF + + QL+ I R+ GTP ++ P
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMP 280
Query: 258 ENISLMW-SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK-- 314
+ + + +S Q K F+ +F+ A LLE ML + RI+A++AL HPYF
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQY 340
Query: 315 -----EKENEP 320
E E+EP
Sbjct: 341 HDPDDEPESEP 351
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 177 bits (449), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI D+GLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 177 bits (448), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + ++ L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIVKX---QKLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 177 bits (448), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 165/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 17 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 73
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 74 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 125
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D LT
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 245
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
+ I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 246 EQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 306 LAHPYLEQ 313
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 165/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 23 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 79
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 80 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 131
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D L
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 312 LAHPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 165/308 (53%), Gaps = 20/308 (6%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D+G +Y L IG GAYG V A D NK VA+KK+ TLREI IL
Sbjct: 24 FDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKIS-PFEHQTYCQRTLREIKIL 80
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
+ F H NI+ D+I + E+ VY++ + ++ DL ++ LS +
Sbjct: 81 LR---FRHENIIGINDIIRAPTI--EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHIC 132
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM----MLTSV 192
Q+L+G+ ++HS ++HRDLKP NLL+ LKI DFGLA+ D D L
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 193 VVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
V T WYRAPEI+LN GY +DIWS+GC++AEM P+F ++QL I ++G+P
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 252 SMNEWPENISLMWS----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S + I+L S +KV ++ +F + SKA LL+ MLTFNP RI A
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 308 LEHPYFKE 315
L HPY ++
Sbjct: 313 LAHPYLEQ 320
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 101
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 102 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 156
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ D +M V T WYRAP
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--XGYVATRWYRAP 214
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 316 --KENEPL 321
++EP+
Sbjct: 335 HDPDDEPV 342
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 166/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G+ VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DF LA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + ++ L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIVKS---QKLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGL + D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI FGLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 85
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 86 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 140
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ +M T V T WYRAP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM--TGYVATRWYRAP 198
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 316 --KENEPL 321
++EP+
Sbjct: 319 HDPDDEPV 326
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 85
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 86 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 140
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ +M T V T WYRAP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM--TGYVATRWYRAP 198
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 316 --KENEPL 321
++EP+
Sbjct: 319 HDPDDEPV 326
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 85
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 86 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 140
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI DFGLA+ +M T V T WYRAP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM--TGYVATRWYRAP 198
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 316 --KENEPL 321
++EP+
Sbjct: 319 HDPDDEPV 326
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI D GLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI D GLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 18/308 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y L +G GAYG+V A D + G VA+KKL T RE+ +LK +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-- 78
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC L+ V+ L Q
Sbjct: 79 -KHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQ--KLTDDHVQFLIYQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP NL + LKI D GLA+ D +M T V T WYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM--TGYVATRWYRAP 191
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
EI+LN + Y VDIWS+GC+MAE+ LF + ++QLK I R++GTP
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE- 315
E+ S Q K+ F+ +F+ A LLE ML + RI+AA AL H YF +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 316 --KENEPL 321
++EP+
Sbjct: 312 HDPDDEPV 319
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 70
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 71 YRELVLMKXVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLXQVIQM---- 121
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 122 ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 181
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 302 LVIDPAKRISVDDALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 70
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 71 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLXQVIQM---- 121
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 122 ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 181
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 302 LVIDPAKRISVDDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 5 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 63
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 64 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLXQVIQM---- 114
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 115 ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 174
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 295 LVIDPAKRISVDDALQHPYI 314
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 70
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 71 YRELVLMKXVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLXQVIQM---- 121
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 181
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 302 LVIDPAKRISVDDALQHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 70
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 71 YRELVLMKXVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 121
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 181
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 302 LVIDPAKRISVDDALQHPYI 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 163/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKVVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLSQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+GC+M EM + LF + ++Q +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTPS M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 166/311 (53%), Gaps = 26/311 (8%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++ L +G GAYG+V A D + + VA+KKL T RE+ +LK L
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHARRTYRELRLLKHL-- 84
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + + KC LS V+ L Q
Sbjct: 85 -KHENVIGLLDVF-TPATSIEDFSEVYLVTTLMGADLNNIV-KCQ--ALSDEHVQFLVYQ 139
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP N+ + L+I DFGLA+ D +M T V T WYRAP
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM--TGYVATRWYRAP 197
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
EI+LN + Y VDIWS+GC+MAE+ + LF S ++QLK I V+GTPS PE +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS----PEVL 253
Query: 261 SLMWS--------SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
+ + S S + S+IF A LL ML + R+SAA+AL H Y
Sbjct: 254 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313
Query: 313 FKE---KENEP 320
F + E+EP
Sbjct: 314 FSQYHDPEDEP 324
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 50 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 108
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 109 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 159
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 219
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 339
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 340 LVIDPAKRISVDDALQHPYI 359
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 163/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKVVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLSQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+GC+M EM + LF + ++Q +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTPS M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 170 bits (431), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 165/311 (53%), Gaps = 26/311 (8%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++ L +G GAYG+V A D + + VA+KKL T RE+ +LK L
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHARRTYRELRLLKHL-- 84
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+H N++ DV S E + VYL+ + DL + ++ LS V+ L Q
Sbjct: 85 -KHENVIGLLDVF-TPATSIEDFSEVYLVTTLMGADLNNIVKSQ---ALSDEHVQFLVYQ 139
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L+G+ ++HS IIHRDLKP N+ + L+I DFGLA+ D +M T V T WYRAP
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM--TGYVATRWYRAP 197
Query: 202 EILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
EI+LN + Y VDIWS+GC+MAE+ + LF S ++QLK I V+GTPS PE +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS----PEVL 253
Query: 261 SLMWS--------SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
+ + S S + S+IF A LL ML + R+SAA+AL H Y
Sbjct: 254 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313
Query: 313 FKE---KENEP 320
F + E+EP
Sbjct: 314 FSQYHDPEDEP 324
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 170 bits (431), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 50 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 108
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 109 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 159
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 219
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 339
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 340 LVIDPAKRISVDDALQHPYI 359
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 170 bits (431), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 13 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 71
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 72 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 122
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 182
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 242
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 243 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 302
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 303 LVIDPAKRISVDDALQHPYI 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 170 bits (431), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 6 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 64
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 65 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 115
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 175
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 236 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 295
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 296 LVIDPAKRISVDDALQHPYI 315
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 70
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 71 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 121
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 302 LVIDPAKRISVDDALQHPYI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 6 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 64
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 65 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 115
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 175
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 236 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 295
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 296 LVIDPAKRISVDDALQHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 5 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 63
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 64 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 114
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 115 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 174
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 295 LVIDPAKRISVDDALQHPYI 314
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 163/303 (53%), Gaps = 26/303 (8%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G GAYG+V A D + + VA+KKL T RE+ +LK L +H N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHARRTYRELRLLKHL---KHENVIG 83
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFL 149
DV S E + VYL+ + DL + + KC LS V+ L Q+L+G+ ++
Sbjct: 84 LLDVF-TPATSIEDFSEVYLVTTLMGADLNNIV-KCQ--ALSDEHVQFLVYQLLRGLKYI 139
Query: 150 HSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLN-LG 208
HS IIHRDLKP N+ + L+I DFGLA+ D +M T V T WYRAPEI+LN +
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEM--TGYVATRWYRAPEIMLNWMH 197
Query: 209 YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWS--- 265
Y VDIWS+GC+MAE+ + LF S ++QLK I V+GTPS PE ++ + S
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS----PEVLAKISSEHA 253
Query: 266 -----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE---KE 317
S + S+IF A LL ML + R+SAA+AL H YF + E
Sbjct: 254 RTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPE 313
Query: 318 NEP 320
+EP
Sbjct: 314 DEP 316
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 11 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 69
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 70 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 120
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 121 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 180
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 181 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 240
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 241 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 300
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 301 LVIDPAKRISVDDALQHPYI 320
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 163/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLSQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+GC+M EM + LF + ++Q +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTPS M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 13 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 71
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 72 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 122
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 182
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 242
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 243 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 302
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 303 LVIDPAKRISVDDALQHPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 16 SLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
S+++GD K+Y L IG GA G V A D N VA+KKL
Sbjct: 12 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRA 70
Query: 70 LREISILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
RE+ ++K ++ H NI+ +V Q L E + VYL+ E +D +L ++
Sbjct: 71 YRELVLMKCVN---HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIQM---- 121
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T M
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
+T VVT +YRAPE++L +GY VDIWS+GC+M EM R LF ++Q + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 249 GTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESM 293
GTP M + + + +Y+ + F +F D S+A LL M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 294 LTFNPADRISAADALEHPYF 313
L +PA RIS DAL+HPY
Sbjct: 302 LVIDPAKRISVDDALQHPYI 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 162/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKVVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLSQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+G +M EM + LF + ++Q +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTPS M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 163/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLSQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+GC+M EM + LF + ++Q +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTPS M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 162/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKVVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLSQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+G +M EM + LF + ++Q +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTPS M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 163/313 (52%), Gaps = 23/313 (7%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q +N + +L K Y +G GAYG+V A D + G VA+KKL +
Sbjct: 13 QDVNKTAWEL-PKTYVSPTHVGSGAYGSVCSAID-KRSGEKVAIKKLSRPFQSEIFAKRA 70
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG 129
RE+ +LK + +H N++ DV S + YL+ + DL M G
Sbjct: 71 YRELLLLKHM---QHENVIGLLDVF-TPASSLRNFYDFYLVMPFMQTDLQKIM------G 120
Query: 130 L--SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM 187
L S K++ L QMLKG+ ++HS ++HRDLKP NL + LKI DFGLA+ D +M
Sbjct: 121 LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM 180
Query: 188 MLTSVVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
T VVT WYRAPE++L+ + Y VDIWS+GC+MAEM LF ++QL I +
Sbjct: 181 --TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 238
Query: 247 VIGTPSMNEWPENISLMWS-----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADR 301
V G P E+ + ++ + S Q + F+ +F +A LLE ML + R
Sbjct: 239 VTGVPG-TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR 297
Query: 302 ISAADALEHPYFK 314
++AA AL HP+F+
Sbjct: 298 LTAAQALTHPFFE 310
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 163/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLCQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+GC+M EM + LF + ++Q +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTPS M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 167 bits (422), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 161/311 (51%), Gaps = 19/311 (6%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q +N + +L K Y +G GAYG+V A D + G VA+KKL +
Sbjct: 31 QDVNKTAWEL-PKTYVSPTHVGSGAYGSVCSAID-KRSGEKVAIKKLSRPFQSEIFAKRA 88
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG 129
RE+ +LK + +H N++ DV S + YL+ + DL M
Sbjct: 89 YRELLLLKHM---QHENVIGLLDVF-TPASSLRNFYDFYLVMPFMQTDLQKIMGM----E 140
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
S K++ L QMLKG+ ++HS ++HRDLKP NL + LKI DFGLA+ D +M
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM-- 198
Query: 190 TSVVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVI 248
T VVT WYRAPE++L+ + Y VDIWS+GC+MAEM LF ++QL I +V
Sbjct: 199 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 258
Query: 249 GTPSMNEWPENISLMWS-----SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRIS 303
G P E+ + ++ + S Q + F+ +F +A LLE ML + R++
Sbjct: 259 GVPG-TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 317
Query: 304 AADALEHPYFK 314
AA AL HP+F+
Sbjct: 318 AAQALTHPFFE 328
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 162/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 10 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 68
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 69 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLCQVIQM-- 122
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 123 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+GC+M EM + LF + ++Q +
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 240
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTP M + + + +Y+ +F +F D S+A LL
Sbjct: 241 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 300
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 301 KMLVIDASKRISVDEALQHPYI 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 162/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLCQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+GC+M EM + LF + ++Q +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTP M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 162/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLCQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VDIWS+GC+M EM + LF + ++Q +
Sbjct: 180 FMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTP M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 167/309 (54%), Gaps = 38/309 (12%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY+++ +IG G+YG VFK R+ ++ G VA+KK ++ I LREI +LKQL
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRN-RDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-- 59
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
+HPN+V +V R ++L+FE+ D + +++ G+ VK +T Q
Sbjct: 60 -KHPNLVNLLEVF-------RRKRRLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQ 110
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYDMMLTSVVVTLW 197
L+ V+F H H IHRD+KP+N+LIT+ +K+ DFG A+ DY V T W
Sbjct: 111 TLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY---YDDEVATRW 167
Query: 198 YRAPEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIG--TPSMN 254
YR+PE+L+ + YG PVD+W+IGCV AE+ VPL+ ++V+QL I + +G P
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQ 227
Query: 255 EWPENISLMWSSFEQYSKV---------AFSAIFMDCCSKANSLLESMLTFNPADRISAA 305
+ ++S+ + +S V F + A LL+ L +P +R++
Sbjct: 228 Q-------VFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCE 280
Query: 306 DALEHPYFK 314
L HPYF+
Sbjct: 281 QLLHHPYFE 289
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 155/317 (48%), Gaps = 36/317 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G GAYG V A + G VA+KK+ ++ + TLREI ILK F+H NI+
Sbjct: 19 LGEGAYGVVCSATH-KPTGEIVAIKKIE-PFDKPLFALRTLREIKILKH---FKHENIIT 73
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFL 149
F++ Q S E + VY+I E + DL + LS ++ Q L+ V L
Sbjct: 74 IFNI--QRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVL 128
Query: 150 HSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM-----------LTSVVVTLWY 198
H +IHRDLKP NLLI LK+ DFGLA+ D +T V T WY
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 199 RAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN--- 254
RAPE++L Y +D+WS GC++AE++ P+F QL IF +IGTP +
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 255 ---EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
E P + S Y +F K LL+ ML F+PA RI+A +ALEHP
Sbjct: 249 RCIESPRAREYI-KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 312 YFK-------EKENEPL 321
Y + E E EP+
Sbjct: 308 YLQTYHDPNDEPEGEPI 324
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 155/317 (48%), Gaps = 36/317 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G GAYG V A + G VA+KK+ ++ + TLREI ILK F+H NI+
Sbjct: 19 LGEGAYGVVCSATH-KPTGEIVAIKKIE-PFDKPLFALRTLREIKILKH---FKHENIIT 73
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFL 149
F++ Q S E + VY+I E + DL + LS ++ Q L+ V L
Sbjct: 74 IFNI--QRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVL 128
Query: 150 HSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM-----------LTSVVVTLWY 198
H +IHRDLKP NLLI LK+ DFGLA+ D +T V T WY
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 199 RAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN--- 254
RAPE++L Y +D+WS GC++AE++ P+F QL IF +IGTP +
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 255 ---EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
E P + S Y +F K LL+ ML F+PA RI+A +ALEHP
Sbjct: 249 RCIESPRAREYI-KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 312 YFK-------EKENEPL 321
Y + E E EP+
Sbjct: 308 YLQTYHDPNDEPEGEPI 324
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 156/310 (50%), Gaps = 30/310 (9%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
K+Y +L IG GA G V A D G VA+KKL RE+ +LK ++
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTV-LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN- 79
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGS--YMEKCPPPGLSASKVKEL 138
H NI+ +V Q L E + VYL+ E +D +L +ME L ++ L
Sbjct: 80 --HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIHME------LDHERMSYL 129
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T + M+T VVT +Y
Sbjct: 130 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYY 189
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS---MNE 255
RAPE++L +GY VDIWS+GC+M E+ + +F + ++Q + +GTPS M
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 249
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESMLTFNPADRIS 303
+ + Y +AF +F D S+A LL ML +P RIS
Sbjct: 250 LQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 309
Query: 304 AADALEHPYF 313
+AL HPY
Sbjct: 310 VDEALRHPYI 319
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 161/322 (50%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 11 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 69
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 70 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLCQVIQM-- 123
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 124 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 181
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+ VVT +YRAPE++L +GY VDIWS+GC+M EM + LF + ++Q +
Sbjct: 182 FMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 241
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTP M + + + +Y+ +F +F D S+A LL
Sbjct: 242 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 301
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 302 KMLVIDASKRISVDEALQHPYI 323
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 154/317 (48%), Gaps = 36/317 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G GAYG V A + G VA+KK+ ++ + TLREI ILK F+H NI+
Sbjct: 19 LGEGAYGVVCSATH-KPTGEIVAIKKIE-PFDKPLFALRTLREIKILKH---FKHENIIT 73
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFL 149
F++ Q S E + VY+I E + DL + LS ++ Q L+ V L
Sbjct: 74 IFNI--QRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVL 128
Query: 150 HSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM-----------LTSVVVTLWY 198
H +IHRDLKP NLLI LK+ DFGLA+ D + V T WY
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 199 RAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN--- 254
RAPE++L Y +D+WS GC++AE++ P+F QL IF +IGTP +
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 255 ---EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
E P + S Y +F K LL+ ML F+PA RI+A +ALEHP
Sbjct: 249 RCIESPRAREYI-KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 312 YFK-------EKENEPL 321
Y + E E EP+
Sbjct: 308 YLQTYHDPNDEPEGEPI 324
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 156/310 (50%), Gaps = 30/310 (9%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
K+Y +L IG GA G V A D G VA+KKL RE+ +LK ++
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTV-LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN- 81
Query: 82 FEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGS--YMEKCPPPGLSASKVKEL 138
H NI+ +V Q L E + VYL+ E +D +L +ME L ++ L
Sbjct: 82 --HKNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVIHME------LDHERMSYL 131
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T + M+T VVT +Y
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYY 191
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS---MNE 255
RAPE++L +GY VDIWS+GC+M E+ + +F + ++Q + +GTPS M
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 251
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLESMLTFNPADRIS 303
+ + +Y + F +F D S+A LL ML +P RIS
Sbjct: 252 LQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 311
Query: 304 AADALEHPYF 313
+AL HPY
Sbjct: 312 VDEALRHPYI 321
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 160/322 (49%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 3 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 61
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 62 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLCQVIQM-- 115
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 116 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VD+WS+GC+M EM LF ++Q +
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIE 233
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTP M + + + +Y+ +F +F D S+A LL
Sbjct: 234 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 293
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 294 KMLVIDASKRISVDEALQHPYI 315
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 160/322 (49%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 14 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 72
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 73 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLCQVIQM-- 126
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 127 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 184
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+T VVT +YRAPE++L +GY VD+WS+GC+M EM LF ++Q +
Sbjct: 185 FMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIE 244
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTP M + + + +Y+ +F +F D S+A LL
Sbjct: 245 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 304
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 305 KMLVIDASKRISVDEALQHPYI 326
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 159/322 (49%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLCQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+ VVT +YRAPE++L +GY VDIWS+GC+M EM LF ++Q +
Sbjct: 180 FMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTP M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 172/323 (53%), Gaps = 34/323 (10%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTL 70
S+N+ DLG +Y +L +GCG G VF A D + VA+KK + L + L
Sbjct: 1 SMNIHGFDLG-SRYMDLKPLGCGGNGLVFSAVD-NDCDKRVAIKK--IVLTDPQSVKHAL 56
Query: 71 REISILKQLDTFEHPNIVRFFDVIH---QNILSDERYLT----VYLIFEHVDQDLGSYME 123
REI I+++LD H NIV+ F+++ + D LT VY++ E+++ DL + +E
Sbjct: 57 REIKIIRRLD---HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE 113
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKT 182
+ P L + Q+L+G+ ++HS ++HRDLKP NL I T LKI DFGLA+
Sbjct: 114 QGP---LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
Query: 183 FD----YDMMLTSVVVTLWYRAPEILLNL-GYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
D + L+ +VT WYR+P +LL+ Y +D+W+ GC+ AEM LF + E
Sbjct: 171 MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE 230
Query: 238 VEQLKCIFRVIGTPSMNEWPENISLMWSSFEQYSK-------VAFSAIFMDCCSKANSLL 290
+EQ++ I I P ++E E+ + S Y + + + +A L
Sbjct: 231 LEQMQLILESI--PVVHE--EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFL 286
Query: 291 ESMLTFNPADRISAADALEHPYF 313
E +LTF+P DR++A +AL HPY
Sbjct: 287 EQILTFSPMDRLTAEEALSHPYM 309
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 159/322 (49%), Gaps = 30/322 (9%)
Query: 13 NLDSLDLGD------KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP 66
N S+++GD K+Y L IG GA G V A D + N VA+KKL
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHA 67
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP 126
RE+ ++K ++ H NI+ +V S E + VY++ E +D +L ++
Sbjct: 68 KRAYRELVLMKCVN---HKNIIGLLNVFTPQ-KSLEEFQDVYIVMELMDANLCQVIQM-- 121
Query: 127 PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
L ++ L QML G+ LHS IIHRDLKP N+++ LKI DFGLA+T
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
M+ VVT +YRAPE++L +GY VD+WS+GC+M EM LF ++Q +
Sbjct: 180 FMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIE 239
Query: 247 VIGTPS---MNEWPENISLMWSSFEQYSKVAFSAIFMDC------------CSKANSLLE 291
+GTP M + + + +Y+ +F +F D S+A LL
Sbjct: 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 292 SMLTFNPADRISAADALEHPYF 313
ML + + RIS +AL+HPY
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 173/346 (50%), Gaps = 59/346 (17%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY+ + ++G GAYG V+K+ D + G VA+KK+ T REI IL +L
Sbjct: 9 RKYELVKKLGKGAYGIVWKSID-RRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
H NIV N+L + VYL+F++++ DL + + L + + Q
Sbjct: 68 --HENIVNLL-----NVLRADNDRDVYLVFDYMETDLHAVIRANI---LEPVHKQYVVYQ 117
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF------------------ 183
++K + +LHS ++HRD+KP N+L+ +K+ADFGL+++F
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 184 ----DYDMMLTSVVVTLWYRAPEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
D +LT V T WYRAPEILL + Y +D+WS+GC++ E+ P+F S+ +
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237
Query: 239 EQLKCIFRVIGTPSMNEWPENIS-----LMWSSFEQYSKVAFSA---IFM---------- 280
QL+ I VI PS NE E+I M S ++ ++ S IF
Sbjct: 238 NQLERIIGVIDFPS-NEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKIN 296
Query: 281 ---DCCSKANSLLESMLTFNPADRISAADALEHPY---FKEKENEP 320
DC +A LL+ +L FNP RISA DAL+HP+ F EP
Sbjct: 297 PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 171/327 (52%), Gaps = 49/327 (14%)
Query: 26 ELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHP 85
E C++G G YG V+KA+ K + K ++ GI MS REI++L++L +HP
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALK---QIEGTGISMSACREIALLREL---KHP 78
Query: 86 NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYME-------KCPPPGLSASKVKEL 138
N++ Q + V+L+F++ + DL ++ P L VK L
Sbjct: 79 NVISL-----QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI----TRAGGLKIADFGLAKTFDYDMM----LT 190
Q+L G+ +LH++ ++HRDLKP N+L+ G +KIAD G A+ F+ + L
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 193
Query: 191 SVVVTLWYRAPEILLNL-GYGTPVDIWSIGCVMAEMWRLVPLF-CASTEV--------EQ 240
VVVT WYRAPE+LL Y +DIW+IGC+ AE+ P+F C ++ +Q
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253
Query: 241 LKCIFRVIGTPSMNEW------PENISLMWSSFEQYSKVAFSAI-FMDCC-----SKANS 288
L IF V+G P+ +W PE+ +LM F + + S I +M+ SKA
Sbjct: 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLM-KDFRRNTYTNCSLIKYMEKHKVKPDSKAFH 312
Query: 289 LLESMLTFNPADRISAADALEHPYFKE 315
LL+ +LT +P RI++ A++ PYF E
Sbjct: 313 LLQKLLTMDPIKRITSEQAMQDPYFLE 339
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 165/344 (47%), Gaps = 68/344 (19%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP-MSTLREISILKQLDTFEHPNIV 88
IG G+YG V+ A D + N VA+KK+ ++ ED I LREI+IL +L + I+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKN-VAIKKVN-RMFEDLIDCKRILREITILNRLKS---DYII 88
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDF 148
R +D+I + L ++ +Y++ E D DL + P L+ +K + +L G +F
Sbjct: 89 RLYDLIIPDDLL--KFDELYIVLEIADSDLKKLFKT--PIFLTEEHIKTILYNLLLGENF 144
Query: 149 LHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---------------------- 186
+H IIHRDLKP N L+ + +K+ DFGLA+T + +
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 187 -MMLTSVVVTLWYRAPE-ILLNLGYGTPVDIWSIGCVMAEMWRLV-----------PLFC 233
LTS VVT WYRAPE ILL Y +DIWS GC+ AE+ ++ PLF
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264
Query: 234 AS-----------------TEVEQLKCIFRVIGTPSMNEW-----PENISLMWSSFEQYS 271
S + +QL IF +IGTP+ ++ PE I + F
Sbjct: 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYI-KLFPHRK 323
Query: 272 KVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
+ + +LLESML FNP RI+ AL+HPY K+
Sbjct: 324 PINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 169/359 (47%), Gaps = 76/359 (21%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP-MSTLREISILKQLDT 81
+Y+ IG G+YG V +A D K VA+KK+ +++ ED I LREI+IL +L+
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEK-RVVAIKKI-LRVFEDLIDCKRILREIAILNRLN- 110
Query: 82 FEHPNIVRFFDVIHQNILSD-ERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
H ++V+ D++ I D E++ +Y++ E D D P L+ +K L
Sbjct: 111 --HDHVVKVLDIV---IPKDVEKFDELYVVLEIADSDFKKLFRT--PVYLTELHIKTLLY 163
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY--------------- 185
+L GV ++HS I+HRDLKP N L+ + +K+ DFGLA+T DY
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRED 223
Query: 186 DM-------------MLTSVVVTLWYRAPE-ILLNLGYGTPVDIWSIGCVMAEMWRLV-- 229
DM LT VVT WYRAPE ILL Y +D+WSIGC+ AE+ ++
Sbjct: 224 DMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283
Query: 230 ---------PLFCAST--------------------EVEQLKCIFRVIGTPSMNEW---- 256
PLF S+ +QL IF ++GTPS +
Sbjct: 284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALE 343
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
E+ F + + F + A LL+ ML FNP RI+ + L HP+FKE
Sbjct: 344 KEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 137/231 (59%), Gaps = 14/231 (6%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY+ L +G G+YG V K R+ ++ G VA+KK ++ + +REI +LKQL
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRN-KDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-- 81
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
H N+V +V + +R+ YL+FE VD + +E P GL V++ Q
Sbjct: 82 -RHENLVNLLEVCKKK----KRW---YLVFEFVDHTILDDLE-LFPNGLDYQVVQKYLFQ 132
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY-DMMLTSVVVTLWYRA 200
++ G+ F HSH IIHRD+KP+N+L++++G +K+ DFG A+T + V T WYRA
Sbjct: 133 IINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRA 192
Query: 201 PEILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
PE+L+ ++ YG VD+W+IGC++ EM+ PLF ++++QL I +G
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGN 243
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 162/353 (45%), Gaps = 71/353 (20%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP-MSTLREISILKQLDTFEHPNIV 88
IG G+YG V+ A D +N VA+KK+ ++ ED I LREI+IL +L + I+
Sbjct: 36 IGRGSYGYVYLAYD-KNANKNVAIKKVN-RMFEDLIDCKRILREITILNRLKS---DYII 90
Query: 89 RFFD-VIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
R D +I +++L ++ +Y++ E D DL + P L+ VK + +L G
Sbjct: 91 RLHDLIIPEDLL---KFDELYIVLEIADSDLKKLFKT--PIFLTEQHVKTILYNLLLGEK 145
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD--------------------- 186
F+H IIHRDLKP N L+ + +KI DFGLA+T + D
Sbjct: 146 FIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 187 -----MMLTSVVVTLWYRAPE-ILLNLGYGTPVDIWSIGCVMAEMWRLV----------- 229
LTS VVT WYRAPE ILL Y +DIWS GC+ AE+ ++
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRF 265
Query: 230 PLFCAS-----------------TEVEQLKCIFRVIGTPSMNEW----PENISLMWSSFE 268
PLF S + +QL IF VIGTP + + + F
Sbjct: 266 PLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFP 325
Query: 269 QYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEPL 321
+ S + + LLESML FN RI+ AL HPY K+ E L
Sbjct: 326 TRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENL 378
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 145/299 (48%), Gaps = 21/299 (7%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTL-------REISILKQLDTF 82
I G+YG V D ++G VA+K++ ++ DG ++ L R + ++ L+ F
Sbjct: 30 ISSGSYGAVCAGVD--SEGIPVAIKRVFNTVS-DGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 83 EHPNIVRFFDV-IHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
HPNI+ D+ +H + +YL+ E + DL + +S ++
Sbjct: 87 HHPNILGLRDIFVH---FEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQYFMYH 142
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L G+ LH ++HRDL P N+L+ + I DF LA+ D T V WYRAP
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 202 EILLNL-GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
E+++ G+ VD+WS GCVMAEM+ LF ST QL I V+GTP + +
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFS 262
Query: 257 -PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
P + +S A++A+ A L+ ML FNP RIS AL HPYF+
Sbjct: 263 SPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 145/299 (48%), Gaps = 21/299 (7%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTL-------REISILKQLDTF 82
I G+YG V D ++G VA+K++ ++ DG ++ L R + ++ L+ F
Sbjct: 30 ISSGSYGAVCAGVD--SEGIPVAIKRVFNTVS-DGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 83 EHPNIVRFFDV-IHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
HPNI+ D+ +H + +YL+ E + DL + +S ++
Sbjct: 87 HHPNILGLRDIFVH---FEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQYFMYH 142
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+L G+ LH ++HRDL P N+L+ + I DF LA+ D T V WYRAP
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 202 EILLNL-GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW---- 256
E+++ G+ VD+WS GCVMAEM+ LF ST QL I V+GTP + +
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFS 262
Query: 257 -PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
P + +S A++A+ A L+ ML FNP RIS AL HPYF+
Sbjct: 263 SPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 160/298 (53%), Gaps = 30/298 (10%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
IG G++G VF+A+ +++ + VA+KK L+ K ++ RE+ I++ +HPN+V
Sbjct: 48 IGNGSFGVVFQAKLVES--DEVAIKKVLQDKRFKN-------RELQIMR---IVKHPNVV 95
Query: 89 RFFDVIHQNI-LSDERYLTVYLIFEHVDQDLG------SYMEKCPPPGLSASKVKELTRQ 141
+ N DE +L L+ E+V + + + +++ P L +K Q
Sbjct: 96 DLKAFFYSNGDKKDEVFLN--LVLEYVPETVYRASRHYAKLKQTMPMLL----IKLYMYQ 149
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGG-LKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+L+ + ++HS I HRD+KPQNLL+ G LK+ DFG AK S + + +YRA
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRA 209
Query: 201 PEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE- 258
PE++ Y T +DIWS GCVMAE+ + PLF + ++QL I +V+GTPS +
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269
Query: 259 NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
N + M F Q FS +F A L+ +L + P+ R++A +AL HP+F E
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 150/301 (49%), Gaps = 28/301 (9%)
Query: 31 GCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRF 90
G G +GTV ++ ++ G VA+KK+ P RE+ I++ L HPNIV+
Sbjct: 32 GQGTFGTVQLGKE-KSTGMSVAIKKVIQD------PRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 91 FDVIHQNILSDERYLTVYLIFEHVDQDLG----SYMEK--CPPPGLSASKVKELTRQMLK 144
+ D R + + ++ E+V L +Y + PPP L +K Q+++
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL----IKVFLFQLIR 140
Query: 145 GVDFLH--SHRIIHRDLKPQNLLITRAGG-LKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
+ LH S + HRD+KP N+L+ A G LK+ DFG AK + + + +YRAP
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200
Query: 202 EILL-NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS------MN 254
E++ N Y T VDIWS+GC+ AEM P+F QL I RV+G PS +N
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLN 260
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
++ L S +S V FS + +A LL ++L + P +R+ +AL HPYF
Sbjct: 261 PSHTDVDLYNSKGIPWSNV-FSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 315 E 315
E
Sbjct: 320 E 320
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 156/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 22 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 71
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF DV++ N++ D TVY + H + + L
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 121
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 309 EHPYFKE 315
H +F E
Sbjct: 302 AHSFFDE 308
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 22 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQGKAFKN-------RELQIMRKLD-- 71
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQT---------LPV 121
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + +F Q ++ +F +A +L +L + P R++ +A
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 309 EHPYFKE 315
H +F E
Sbjct: 302 AHSFFDE 308
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 46/333 (13%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
+Y+ L IG G++G V KA D +VA+K +R NE EI IL+ L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYD-HKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRKQ 153
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
+ N + ++ + + + FE + +L ++K G S V++ +
Sbjct: 154 DKDNTMNVIHMLENFTFRNH----ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAG--GLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
L+ +D LH +RIIH DLKP+N+L+ + G G+K+ DFG + +++ + T + + +YRA
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQ-SRFYRA 267
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM-----NE 255
PE++L YG P+D+WS+GC++AE+ PL E +QL C+ ++G PS ++
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327
Query: 256 WPENISLMWSSFEQYSKVAF----SAIFMDCCSKANSL---------------------- 289
+N + + +Y V S + S+ L
Sbjct: 328 RAKNF-VSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386
Query: 290 --LESMLTFNPADRISAADALEHPYFKEKENEP 320
L+ L ++PA R++ AL HP+ + + +P
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKP 419
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 22 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQGKAFKN-------RELQIMRKLD-- 71
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 121
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + +F Q ++ +F +A +L +L + P R++ +A
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 309 EHPYFKE 315
H +F E
Sbjct: 302 AHSFFDE 308
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 22 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQGKAFKN-------RELQIMRKLD-- 71
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 121
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 309 EHPYFKE 315
H +F E
Sbjct: 302 AHSFFDE 308
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 34 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 83
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 84 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 133
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 253
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 254 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 313
Query: 309 EHPYFKE 315
H +F E
Sbjct: 314 AHSFFDE 320
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 30 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 79
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 80 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 129
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 130 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 189
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 190 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 249
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 250 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 309
Query: 309 EHPYFKE 315
H +F E
Sbjct: 310 AHSFFDE 316
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 46/329 (13%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
+Y+ L IG G++G V KA D +VA+K +R NE EI IL+ L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYD-HKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRKQ 153
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
+ N + ++ + + + FE + +L ++K G S V++ +
Sbjct: 154 DKDNTMNVIHMLENFTFRNH----ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAG--GLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
L+ +D LH +RIIH DLKP+N+L+ + G G+K+ DFG + +++ + T + + +YRA
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQ-SRFYRA 267
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM-----NE 255
PE++L YG P+D+WS+GC++AE+ PL E +QL C+ ++G PS ++
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327
Query: 256 WPENISLMWSSFEQYSKVAF----SAIFMDCCSKANSL---------------------- 289
+N + + +Y V S + S+ L
Sbjct: 328 RAKNF-VSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386
Query: 290 --LESMLTFNPADRISAADALEHPYFKEK 316
L+ L ++PA R++ AL HP+ + +
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLRRR 415
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 22 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 71
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 121
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 309 EHPYFKE 315
H +F E
Sbjct: 302 AHSFFDE 308
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 50 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 99
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 100 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 149
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 150 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 209
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 269
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 270 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 329
Query: 309 EHPYFKE 315
H +F E
Sbjct: 330 AHSFFDE 336
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 23 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 72
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 73 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 122
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 123 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 183 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 242
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 243 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 302
Query: 309 EHPYFKE 315
H +F E
Sbjct: 303 AHSFFDE 309
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 41 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 90
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 91 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 140
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 141 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 200
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 201 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 260
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 261 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 320
Query: 309 EHPYFKE 315
H +F E
Sbjct: 321 AHSFFDE 327
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 34 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 83
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 84 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 133
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 253
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 254 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 313
Query: 309 EHPYFKE 315
H +F E
Sbjct: 314 AHSFFDE 320
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 26 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 75
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 76 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 125
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 126 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 186 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 245
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 246 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 305
Query: 309 EHPYFKE 315
H +F E
Sbjct: 306 AHSFFDE 312
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 22 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 71
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 121
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 309 EHPYFKE 315
H +F E
Sbjct: 302 AHSFFDE 308
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 56 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 105
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 155
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 216 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335
Query: 309 EHPYFKE 315
H +F E
Sbjct: 336 AHSFFDE 342
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 22 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 71
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 121
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 309 EHPYFKE 315
H +F E
Sbjct: 302 AHSFFDE 308
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 101 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 150
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 151 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 200
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 201 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 260
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 261 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 320
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 321 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 380
Query: 309 EHPYFKE 315
H +F E
Sbjct: 381 AHSFFDE 387
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 60 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 109
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 110 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 159
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 160 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 219
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 220 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 279
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 280 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 339
Query: 309 EHPYFKE 315
H +F E
Sbjct: 340 AHSFFDE 346
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 58 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 107
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 108 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 157
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 158 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 217
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 218 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 277
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 278 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 337
Query: 309 EHPYFKE 315
H +F E
Sbjct: 338 AHSFFDE 344
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 56 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 105
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 155
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335
Query: 309 EHPYFKE 315
H +F E
Sbjct: 336 AHSFFDE 342
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 35 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 84
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 85 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 134
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 135 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 195 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 254
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 255 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 314
Query: 309 EHPYFKE 315
H +F E
Sbjct: 315 AHSFFDE 321
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKK-LRVKLNEDGIPMSTLREISILKQLDTF 82
Y + IG G++G V++A+ L + G VA+KK L+ K ++ RE+ I+++LD
Sbjct: 27 YTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKN-------RELQIMRKLD-- 76
Query: 83 EHPNIVR---FF-------DVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA 132
H NIVR FF D ++ N++ D TVY + H + + L
Sbjct: 77 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPV 126
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTFDYDMMLTS 191
VK Q+ + + ++HS I HRD+KPQNLL+ LK+ DFG AK S
Sbjct: 127 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
Query: 192 VVVTLWYRAPEILLN-LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT 250
+ + +YRAPE++ Y + +D+WS GCV+AE+ P+F + V+QL I +V+GT
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 246
Query: 251 PSMNEWPE-NISLMWSSFEQYSKVAFSAIFMD-CCSKANSLLESMLTFNPADRISAADAL 308
P+ + E N + F Q ++ +F +A +L +L + P R++ +A
Sbjct: 247 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 306
Query: 309 EHPYFKE 315
H +F E
Sbjct: 307 AHSFFDE 313
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 160/349 (45%), Gaps = 65/349 (18%)
Query: 16 SLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISI 75
L+ KKY +G G++G V + D+++ G A+KK+ +D P RE+ I
Sbjct: 1 GLETSSKKYSLGKTLGTGSFGIVCEVFDIES-GKRFALKKVL----QD--PRYKNRELDI 53
Query: 76 LKQLDTFEHPNIVRFFDVI------------------------------HQNIL---SDE 102
+K LD H NI++ D H++++ S
Sbjct: 54 MKVLD---HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQN 110
Query: 103 RYLTVYLIFEHVDQDLGSYMEKCPPPGLS--ASKVKELTRQMLKGVDFLHSHRIIHRDLK 160
+YL V I E+V L ++ G S + + Q+ + V F+HS I HRD+K
Sbjct: 111 KYLNV--IMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 161 PQNLLI-TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTP-VDIWSI 218
PQNLL+ ++ LK+ DFG AK + + + +YRAPE++L TP +D+WSI
Sbjct: 169 PQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSI 228
Query: 219 GCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAI 278
GCV E+ PLF T ++QL I +++GTP+ + M Y++V F +
Sbjct: 229 GCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQ-------MIRMNPHYTEVRFPTL 281
Query: 279 FMD---------CCSKANSLLESMLTFNPADRISAADALEHPYFKEKEN 318
S A LLE +L + P RI+ +A+ HP+F N
Sbjct: 282 KAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 156/333 (46%), Gaps = 46/333 (13%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
+Y+ L IG G +G V KA D +VA+K +R NE EI IL+ L
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYD-HKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRKQ 153
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
+ N + ++ + + + FE + +L ++K G S V++ +
Sbjct: 154 DKDNTMNVIHMLENFTFRNH----ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAG--GLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
L+ +D LH +RIIH DLKP+N+L+ + G G+K+ DFG + +++ + + + +YRA
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYXXIQ-SRFYRA 267
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM-----NE 255
PE++L YG P+D+WS+GC++AE+ PL E +QL C+ ++G P ++
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASK 327
Query: 256 WPENISLMWSSFEQYSKVAF----SAIFMDCCSKANSL---------------------- 289
+N + + +Y V S + S+ L
Sbjct: 328 RAKNF-VSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386
Query: 290 --LESMLTFNPADRISAADALEHPYFKEKENEP 320
L+ L ++PA R++ AL HP+ + + +P
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKP 419
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 41/302 (13%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y+ +C +G G++G V K +D + Y A+K + ++ + LRE+ +LK+LD
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLD- 79
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNI++ F+++ E + Y++ E + +L + E S + +
Sbjct: 80 --HPNIMKLFEIL-------EDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIK 128
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q+ G+ ++H H I+HRDLKP+N+L+ + +KI DFGL+ F + + + T +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
Y APE+L Y D+WS G ++ + P F E + LK RV + P
Sbjct: 189 YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK---RVETGKYAFDLP 244
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ W + A L+ MLTF+P+ RI+A LEHP+ ++
Sbjct: 245 Q-----WRTI---------------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
Query: 318 NE 319
+E
Sbjct: 285 SE 286
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 41/302 (13%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y+ +C +G G++G V K +D + Y A+K + ++ + LRE+ +LK+LD
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLD- 79
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNI++ F+++ E + Y++ E + +L + E S + +
Sbjct: 80 --HPNIMKLFEIL-------EDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIK 128
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q+ G+ ++H H I+HRDLKP+N+L+ + +KI DFGL+ F + + + T +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
Y APE+L Y D+WS G ++ + P F E + LK RV + P
Sbjct: 189 YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK---RVETGKYAFDLP 244
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ W + A L+ MLTF+P+ RI+A LEHP+ ++
Sbjct: 245 Q-----WRTI---------------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
Query: 318 NE 319
+E
Sbjct: 285 SE 286
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 41/302 (13%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
++Y+ +C +G G++G V K +D + Y A+K + ++ + LRE+ +LK+LD
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLD- 79
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNI++ F+++ E + Y++ E + +L + E S + +
Sbjct: 80 --HPNIMKLFEIL-------EDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIK 128
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q+ G+ ++H H I+HRDLKP+N+L+ + +KI DFGL+ F + + + T +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
Y APE+L Y D+WS G ++ + P F E + LK RV + P
Sbjct: 189 YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK---RVETGKYAFDLP 244
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ W + A L+ MLTF+P+ RI+A LEHP+ ++
Sbjct: 245 Q-----WRTIS---------------DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
Query: 318 NE 319
+E
Sbjct: 285 SE 286
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 141/298 (47%), Gaps = 45/298 (15%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREISILKQLDT 81
Y + ++G GAYG V RD K +V A+K +R L E+++LK LD
Sbjct: 39 YQRVKKLGSGAYGEVLLCRD---KVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD- 94
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTR 140
HPNI++ +D D+R YL+ E + +L + E + + +
Sbjct: 95 --HPNIMKLYD-----FFEDKR--NYYLVMECYKGGEL--FDEIIHRMKFNEVDAAVIIK 143
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q+L GV +LH H I+HRDLKP+NLL+ + +KI DFGL+ F+ + + T +
Sbjct: 144 QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAY 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
Y APE+L Y D+WSIG ++ + P F T+ E L+ + + T EW
Sbjct: 204 YIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW- 261
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
+N+S A L++ ML F+ RISA ALEHP+ KE
Sbjct: 262 KNVS----------------------EGAKDLIKQMLQFDSQRRISAQQALEHPWIKE 297
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 46/299 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G G++G V +D + G A+K K +VK D S LRE+ +LKQLD HPN
Sbjct: 58 LGKGSFGEVILCKD-KITGQECAVKVISKRQVKQKTD--KESLLREVQLLKQLD---HPN 111
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTRQMLKG 145
I++ ++ D+ Y YL+ E + +L + E S + RQ+L G
Sbjct: 112 IMKLYE-----FFEDKGYF--YLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSG 162
Query: 146 VDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
+ ++H ++I+HRDLKP+NLL+ ++ ++I DFGL+ F+ + + T +Y APE
Sbjct: 163 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 222
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISL 262
+L Y D+WS G ++ + P F + E + LK + + T + +W
Sbjct: 223 VLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK----- 276
Query: 263 MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEPL 321
KV+ S A L+ MLT+ P+ RISA DAL+H + + E +
Sbjct: 277 ---------KVSES---------AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 317
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 46/299 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G G++G V +D + G A+K K +VK D S LRE+ +LKQLD HPN
Sbjct: 57 LGKGSFGEVILCKD-KITGQECAVKVISKRQVKQKTD--KESLLREVQLLKQLD---HPN 110
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTRQMLKG 145
I++ ++ D+ Y YL+ E + +L + E S + RQ+L G
Sbjct: 111 IMKLYE-----FFEDKGYF--YLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSG 161
Query: 146 VDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
+ ++H ++I+HRDLKP+NLL+ ++ ++I DFGL+ F+ + + T +Y APE
Sbjct: 162 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 221
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISL 262
+L Y D+WS G ++ + P F + E + LK + + T + +W
Sbjct: 222 VLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK----- 275
Query: 263 MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEPL 321
KV+ S A L+ MLT+ P+ RISA DAL+H + + E +
Sbjct: 276 ---------KVSES---------AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 316
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 46/299 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G G++G V +D + G A+K K +VK D S LRE+ +LKQLD HPN
Sbjct: 34 LGKGSFGEVILCKD-KITGQECAVKVISKRQVKQKTD--KESLLREVQLLKQLD---HPN 87
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTRQMLKG 145
I++ ++ D+ Y YL+ E + +L + E S + RQ+L G
Sbjct: 88 IMKLYE-----FFEDKGYF--YLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSG 138
Query: 146 VDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
+ ++H ++I+HRDLKP+NLL+ ++ ++I DFGL+ F+ + + T +Y APE
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 198
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISL 262
+L Y D+WS G ++ + P F + E + LK + + T + +W
Sbjct: 199 VLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK----- 252
Query: 263 MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEPL 321
KV+ S A L+ MLT+ P+ RISA DAL+H + + E +
Sbjct: 253 ---------KVSES---------AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 293
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 144/292 (49%), Gaps = 46/292 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G G++G V +D + G A+K K +VK D S LRE+ +LKQLD HPN
Sbjct: 40 LGKGSFGEVILCKD-KITGQECAVKVISKRQVKQKTD--KESLLREVQLLKQLD---HPN 93
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTRQMLKG 145
I++ ++ D+ Y YL+ E + +L + E S + RQ+L G
Sbjct: 94 IMKLYE-----FFEDKGYF--YLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSG 144
Query: 146 VDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
+ ++H ++I+HRDLKP+NLL+ ++ ++I DFGL+ F+ + + T +Y APE
Sbjct: 145 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 204
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISL 262
+L Y D+WS G ++ + P F + E + LK + + T + +W
Sbjct: 205 VLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW------ 257
Query: 263 MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
KV+ S A L+ MLT+ P+ RISA DAL+H + +
Sbjct: 258 --------KKVSES---------AKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 164/334 (49%), Gaps = 45/334 (13%)
Query: 16 SLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISI 75
S D+ +Y+ + +G GA+G V + D + G +VA+K ++ N D + EI +
Sbjct: 8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQV 64
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
L+ L+T + PN F + Q + E + + ++FE + ++++ +
Sbjct: 65 LEHLNTTD-PNST--FRCV-QMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHI 120
Query: 136 KELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG-------------------GLKIAD 176
+++ Q+ K V+FLHS+++ H DLKP+N+L ++ +K+ D
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 177 FGLAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCAST 236
FG A T+D D +++V T YRAPE++L LG+ P D+WSIGC++ E + +F
Sbjct: 181 FGSA-TYD-DEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 237 EVEQLKCIFRVIG--------TPSMNEWPENISLMW---SSFEQYSKVAFSAI--FMDC- 282
E L + R++G ++ + L W SS +Y A + FM
Sbjct: 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQ 298
Query: 283 ---CSKANSLLESMLTFNPADRISAADALEHPYF 313
+ L++ ML ++PA RI+ +AL+HP+F
Sbjct: 299 DVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 163/334 (48%), Gaps = 45/334 (13%)
Query: 16 SLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISI 75
S D+ +Y+ + +G GA+G V + D + G +VA+K ++ N D + EI +
Sbjct: 8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQV 64
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
L+ L+T + PN F + Q + E + + ++FE + ++++ +
Sbjct: 65 LEHLNTTD-PNST--FRCV-QMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHI 120
Query: 136 KELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG-------------------GLKIAD 176
+++ Q+ K V+FLHS+++ H DLKP+N+L ++ +K+ D
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 177 FGLAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCAST 236
FG A T+D D +++V YRAPE++L LG+ P D+WSIGC++ E + +F
Sbjct: 181 FGSA-TYD-DEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 237 EVEQLKCIFRVIG--------TPSMNEWPENISLMW---SSFEQYSKVAFSAI--FMDC- 282
E L + R++G ++ + L W SS +Y A + FM
Sbjct: 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQ 298
Query: 283 ---CSKANSLLESMLTFNPADRISAADALEHPYF 313
+ L++ ML ++PA RI+ +AL+HP+F
Sbjct: 299 DVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 40/294 (13%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR-VKLNEDGIPMSTLREISILKQLDT 81
+Y + ++G GAYG V +D + G A+K ++ + + L E+++LKQLD
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKD-KLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD- 62
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
HPNI++ ++ D+R YL+ E V + + E S + +Q
Sbjct: 63 --HPNIMKLYE-----FFEDKR--NYYLVME-VYRGGELFDEIILRQKFSEVDAAVIMKQ 112
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
+L G +LH H I+HRDLKP+NLL+ +R +KI DFGL+ F+ + + T +Y
Sbjct: 113 VLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 172
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APE+L Y D+WS G ++ + P F T+ E LK + + + +W +
Sbjct: 173 IAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 231
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
+A L++ MLT+ P+ RISA +AL HP+
Sbjct: 232 -----------------------VSDEAKQLVKLMLTYEPSKRISAEEALNHPW 262
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 40/294 (13%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR-VKLNEDGIPMSTLREISILKQLDT 81
+Y + ++G GAYG V +D + G A+K ++ + + L E+++LKQLD
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKD-KLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD- 79
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
HPNI++ ++ D+R YL+ E V + + E S + +Q
Sbjct: 80 --HPNIMKLYE-----FFEDKR--NYYLVME-VYRGGELFDEIILRQKFSEVDAAVIMKQ 129
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
+L G +LH H I+HRDLKP+NLL+ +R +KI DFGL+ F+ + + T +Y
Sbjct: 130 VLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 189
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APE+L Y D+WS G ++ + P F T+ E LK + + + +W +
Sbjct: 190 IAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 248
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
+A L++ MLT+ P+ RISA +AL HP+
Sbjct: 249 -----------------------VSDEAKQLVKLMLTYEPSKRISAEEALNHPW 279
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 161/347 (46%), Gaps = 61/347 (17%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
D ++Y+ + +G G +G V + D + G VA+K ++ N + + EI++L+
Sbjct: 29 DWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIK---NVEKYKEAARLEINVLE 85
Query: 78 QLDTFEHPN---IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
+++ + N V+ FD + + + + FE + +++ +
Sbjct: 86 KINEKDPDNKNLCVQMFDWF-------DYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQ 138
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLIT-------------------RAGGLKIA 175
V+ + Q+ + V FLH +++ H DLKP+N+L ++ +++
Sbjct: 139 VRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVV 198
Query: 176 DFGLAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCAS 235
DFG A TFD++ +++V T YRAPE++L LG+ P D+WSIGC++ E + LF
Sbjct: 199 DFGSA-TFDHEHH-STIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTH 256
Query: 236 TEVEQLKCIFRVIG-TPSMN---------------EWPENISLMWSSFEQYSKVAFSAIF 279
E L + R++G PS +W EN +S +Y + +
Sbjct: 257 DNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDEN-----TSAGRYVRENCKPLR 311
Query: 280 MDCCSKANS------LLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+A L+ESML + PA R++ +AL+HP+F EP
Sbjct: 312 RYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEP 358
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 157/332 (47%), Gaps = 45/332 (13%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
D ++Y+ + +G G +G V + D + VA+K +R N + EI++LK
Sbjct: 47 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR---NVGKYREAARLEINVLK 103
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE 137
++ + N +F V+ + + ++ + FE + ++ ++++ V+
Sbjct: 104 KIKEKDKEN--KFLCVLMSDWFNFHGHMCI--AFELLGKNTFEFLKENNFQPYPLPHVRH 159
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLIT-------------------RAGGLKIADFG 178
+ Q+ + FLH +++ H DLKP+N+L + +++ADFG
Sbjct: 160 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 219
Query: 179 LAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
A TFD++ T++V T YR PE++L LG+ P D+WSIGC++ E +R LF
Sbjct: 220 SA-TFDHEHH-TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 277
Query: 239 EQLKCIFRVIG-TPSM-------NEWPENISLMW---SSFEQYSKVAF----SAIFMDCC 283
E L + +++G PS ++ L+W SS +Y K S + D
Sbjct: 278 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 337
Query: 284 SKAN--SLLESMLTFNPADRISAADALEHPYF 313
L+ ML F+PA RI+ A+AL HP+F
Sbjct: 338 EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 157/332 (47%), Gaps = 45/332 (13%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
D ++Y+ + +G G +G V + D + VA+K +R N + EI++LK
Sbjct: 24 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR---NVGKYREAARLEINVLK 80
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE 137
++ + N +F V+ + + ++ + FE + ++ ++++ V+
Sbjct: 81 KIKEKDKEN--KFLCVLMSDWFNFHGHMCI--AFELLGKNTFEFLKENNFQPYPLPHVRH 136
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLIT-------------------RAGGLKIADFG 178
+ Q+ + FLH +++ H DLKP+N+L + +++ADFG
Sbjct: 137 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 196
Query: 179 LAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
A TFD++ T++V T YR PE++L LG+ P D+WSIGC++ E +R LF
Sbjct: 197 SA-TFDHEHH-TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 254
Query: 239 EQLKCIFRVIG-TPSM-------NEWPENISLMW---SSFEQYSKVAF----SAIFMDCC 283
E L + +++G PS ++ L+W SS +Y K S + D
Sbjct: 255 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 314
Query: 284 SKAN--SLLESMLTFNPADRISAADALEHPYF 313
L+ ML F+PA RI+ A+AL HP+F
Sbjct: 315 EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 157/332 (47%), Gaps = 45/332 (13%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
D ++Y+ + +G G +G V + D + VA+K +R N + EI++LK
Sbjct: 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR---NVGKYREAARLEINVLK 71
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE 137
++ + N +F V+ + + ++ + FE + ++ ++++ V+
Sbjct: 72 KIKEKDKEN--KFLCVLMSDWFNFHGHMCI--AFELLGKNTFEFLKENNFQPYPLPHVRH 127
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLIT-------------------RAGGLKIADFG 178
+ Q+ + FLH +++ H DLKP+N+L + +++ADFG
Sbjct: 128 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187
Query: 179 LAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
A TFD++ T++V T YR PE++L LG+ P D+WSIGC++ E +R LF
Sbjct: 188 SA-TFDHEHH-TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245
Query: 239 EQLKCIFRVIG-TPSM-------NEWPENISLMW---SSFEQYSKVAF----SAIFMDCC 283
E L + +++G PS ++ L+W SS +Y K S + D
Sbjct: 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 305
Query: 284 SKAN--SLLESMLTFNPADRISAADALEHPYF 313
L+ ML F+PA RI+ A+AL HP+F
Sbjct: 306 EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 46/299 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G G++G V +D + G A+K K +VK D S LRE+ +LKQLD HPN
Sbjct: 34 LGKGSFGEVILCKD-KITGQECAVKVISKRQVKQKTD--KESLLREVQLLKQLD---HPN 87
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTRQMLKG 145
I + ++ D+ Y YL+ E + +L + E S + RQ+L G
Sbjct: 88 IXKLYE-----FFEDKGYF--YLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSG 138
Query: 146 VDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
+ + H ++I+HRDLKP+NLL+ ++ ++I DFGL+ F+ + T +Y APE
Sbjct: 139 ITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPE 198
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISL 262
+L Y D+WS G ++ + P F + E + LK + + T + +W
Sbjct: 199 VLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK----- 252
Query: 263 MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEPL 321
KV+ S A L+ LT+ P+ RISA DAL+H + + E +
Sbjct: 253 ---------KVSES---------AKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQI 293
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 157/325 (48%), Gaps = 37/325 (11%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
++Y++ ++ N D L + ++G G Y VF+A ++ N V VK N
Sbjct: 24 WDYASHVVEWGNQDDYQL-------VRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKN 76
Query: 62 EDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY 121
+ REI IL+ L PNI+ D++ D T L+FEHV+
Sbjct: 77 K------IKREIKILENLRG--GPNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQ 123
Query: 122 MEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLA 180
+ + L+ ++ ++LK +D+ HS I+HRD+KP N++I L++ D+GLA
Sbjct: 124 LYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 181 KTFDYDMMLTSVVVTLWYRAPEILLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEV 238
+ + V + +++ PE+L++ Y +D+WS+GC++A M +R P F
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 239 EQLKCIFRVIGTPSMNEWPE----------NISLMWSSFEQYSKVAFSAIFMDCCSKANS 288
+QL I +V+GT + ++ + N L S +++ + S +A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD 299
Query: 289 LLESMLTFNPADRISAADALEHPYF 313
L+ +L ++ R++A +A+EHPYF
Sbjct: 300 FLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 137/294 (46%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 20 LGKGKFGNVYLARERQSK-FILALKVLFKTQLEKAGVEHQLRREVEIQSHL---RHPNIL 75
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 76 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSRFDEQRTATYITELANALS 126
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ G LKIADFG + T++ TL Y PE++
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E +P F A T E ++
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE--------------------------TY 219
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
+ S+V F+ F D ++ A L+ +L N + R++ A+ LEHP+ K ++P
Sbjct: 220 RRISRVEFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 152/309 (49%), Gaps = 43/309 (13%)
Query: 9 IQSLNLDSL-DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPM 67
++ L+ DSL ++ +D L ++G G+YG+V+KA + G VA+K++ V+ + I
Sbjct: 15 LKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIH-KETGQIVAIKQVPVESDLQEI-- 71
Query: 68 STLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP 127
++EISI++Q D+ P++V+++ +N ++++ E+ S + +
Sbjct: 72 --IKEISIMQQCDS---PHVVKYYGSYFKNT-------DLWIVMEYCGAGSVSDIIRLRN 119
Query: 128 PGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM 187
L+ ++ + + LKG+++LH R IHRD+K N+L+ G K+ADFG+A M
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXM 179
Query: 188 MLTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
+ V+ T ++ APE++ +GY DIWS+G EM P + ++ ++ IF
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA---DIHPMRAIFM 236
Query: 247 V-IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAA 305
+ P PE +WS F+ C K+ P R +A
Sbjct: 237 IPTNPPPTFRKPE----LWSD-------NFTDFVKQCLVKS-----------PEQRATAT 274
Query: 306 DALEHPYFK 314
L+HP+ +
Sbjct: 275 QLLQHPFVR 283
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 133/293 (45%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 19 LGKGKFGNVYLAREKQSKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 74
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 75 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------ 233
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 234 ----------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 69 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 116
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 226
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 227 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 273
Query: 313 FKEKENE 319
K K+ +
Sbjct: 274 IKPKDTQ 280
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 69 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 116
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 226
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 227 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 273
Query: 313 FKEKENE 319
K K+ +
Sbjct: 274 IKPKDTQ 280
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 33 LGKGKFGNVYLAREKQSKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 88
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 89 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 140 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 198
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------- 241
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 242 -----------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 284
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 21 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 76
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 77 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE +
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 223
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 224 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSSKP 272
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 133/293 (45%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 21 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 76
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 77 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------ 235
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 236 ----------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 42 LGKGKFGNVYLAREKQSKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 97
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 98 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 207
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------- 250
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 251 -----------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 15 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 70
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 71 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 122 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 217
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 218 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 266
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 16 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 71
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 72 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 218
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 219 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 20 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 75
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 76 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 222
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 223 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 271
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 17 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 72
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 73 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMIEGR 182
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 219
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 220 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 136/304 (44%), Gaps = 43/304 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEK 316
K K
Sbjct: 275 IKPK 278
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 20 LGKGKFGNVYLARERQSK-FILALKVLFKTQLEKAGVEHQLRREVEIQSHL---RHPNIL 75
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 76 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSRFDEQRTATYITELANALS 126
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ G LKIADFG + ++ TL Y PE++
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E +P F A T E ++
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE--------------------------TY 219
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
+ S+V F+ F D ++ A L+ +L N + R++ A+ LEHP+ K ++P
Sbjct: 220 RRISRVEFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 132/293 (45%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 21 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 76
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 77 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T + TL Y PE++
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------ 235
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 236 ----------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 132/293 (45%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 16 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 71
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 72 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T + TL Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------ 230
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 231 ----------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 131/292 (44%), Gaps = 41/292 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 21 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 76
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDF 148
R + H VYLI E+ + Y E + ++ + +
Sbjct: 77 RLYGYFHDAT-------RVYLILEYAPRG-EVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 149 LHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNLG 208
HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 209 YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSFE 268
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------- 235
Query: 269 QYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 236 ---------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 132/293 (45%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 17 LGKGKFGNVYLAREKQSKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 72
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 73 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T + TL Y PE++
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------ 231
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 232 ----------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 132/293 (45%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 16 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 71
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 72 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T + TL Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------ 230
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 231 ----------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILIGELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FKEKENE 319
K K+ +
Sbjct: 275 IKPKDTQ 281
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 16 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 71
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 72 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T + TL Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 218
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 219 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 16 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 71
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 72 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T + TL Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 218
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 219 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 43/302 (14%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILK 77
D YD ++G G + V K R+ Y A +KK R K + G+ + RE+SILK
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVK 136
++ +HPN++ +V E V LI E V +L ++ L+ +
Sbjct: 70 EI---QHPNVITLHEVY-------ENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSV 192
E +Q+L GV +LHS +I H DLKP+N+++ +KI DFGLA D+ ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------- 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N+S + FE F + + A + +L +P R++ D+L+HP+
Sbjct: 228 ------NVSAVNYEFE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Query: 313 FK 314
K
Sbjct: 275 IK 276
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 18 LGKGKFGNVYLAREKQSKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 73
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 74 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIA+FG + T++ TL Y PE++
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 220
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 221 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 131/286 (45%), Gaps = 45/286 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 19 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 74
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 75 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 221
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPY 312
S+V F+ F D ++ A L+ +L NP+ R + LEHP+
Sbjct: 222 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 19 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 74
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 75 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + ++ TL Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------ 233
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 234 ----------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 19 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 74
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 75 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIA+FG + T++ TL Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 221
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 222 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 133/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 16 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 71
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 72 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + ++ TL Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 218
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 219 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 17 LGKGKFGNVYLAREKQSKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 72
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 73 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + ++ TL Y PE++
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------ 231
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 232 ----------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 130/286 (45%), Gaps = 45/286 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 13 LGKGKFGNVYLAREKQRK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 68
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 69 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + T++ TL Y PE++
Sbjct: 120 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 215
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPY 312
S+V F+ F D ++ A L+ +L NP+ R + LEHP+
Sbjct: 216 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 138/314 (43%), Gaps = 60/314 (19%)
Query: 24 YDELCQIGCGAYGTVFKARDLQ---------------NKGNYVAMKKLRVKLNEDGIPMS 68
Y ++ ++G GAYG V ++ +KG Y K K +E+
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE----- 92
Query: 69 TLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKC-PP 127
EIS+LK LD HPNI++ FDV D++Y YL+ E + G E+
Sbjct: 93 IYNEISLLKSLD---HPNIIKLFDV-----FEDKKYF--YLVTEFYEG--GELFEQIINR 140
Query: 128 PGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGL---KIADFGLAKTFD 184
+ +Q+L G+ +LH H I+HRD+KP+N+L+ L KI DFGL+ F
Sbjct: 141 HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 185 YDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCI 244
D L + T +Y APE+ L Y D+WS G +M + P F + + +K +
Sbjct: 201 KDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
Query: 245 FRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISA 304
+ N+W NIS +A L++ MLT++ R +A
Sbjct: 260 EKGKYYFDFNDWK-NIS----------------------DEAKELIKLMLTYDYNKRCTA 296
Query: 305 ADALEHPYFKEKEN 318
+AL + K+ N
Sbjct: 297 EEALNSRWIKKYAN 310
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 18 LGKGKFGNVYLAREKQSKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 73
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 74 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + + TL Y PE++
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T +P+ ++
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVT------ 232
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
A L+ +L NP+ R + LEHP+ ++P
Sbjct: 233 ----------------EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 132/294 (44%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 16 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 71
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 72 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + + TL Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 218
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 219 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 130/294 (44%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 42 LGKGKFGNVYLAREKQSKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 97
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 98 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + + TL Y PE++
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 207
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I RV T
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------- 250
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 251 -----------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 132/294 (44%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 19 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 74
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 75 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + + TL Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 221
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 222 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 42/301 (13%)
Query: 17 LDLGD--KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+ +GD KKY +IG GA GTV+ A D+ G VA++++ L + + EI
Sbjct: 13 VSVGDPKKKYTRFEKIGQGASGTVYTAMDVAT-GQEVAIRQM--NLQQQPKKELIINEIL 69
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
++++ ++PNIV + D ++ DE ++++ E++ GS + + +
Sbjct: 70 VMRE---NKNPNIVNYLD---SYLVGDE----LWVVMEYLAG--GSLTDVVTETCMDEGQ 117
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + R+ L+ ++FLHS+++IHRD+K N+L+ G +K+ DFG + S +V
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ YG VDIWS+G + EM P + + L I GTP +
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL 236
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
PE + SAIF D L L + R SA + L+H +
Sbjct: 237 QN-PEKL---------------SAIFRD-------FLNRCLDMDVEKRGSAKELLQHQFL 273
Query: 314 K 314
K
Sbjct: 274 K 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 42/301 (13%)
Query: 17 LDLGD--KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+ +GD KKY +IG GA GTV+ A D+ G VA++++ L + + EI
Sbjct: 13 VSVGDPKKKYTRFEKIGQGASGTVYTAMDVAT-GQEVAIRQM--NLQQQPKKELIINEIL 69
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
++++ ++PNIV + D ++ DE ++++ E++ GS + + +
Sbjct: 70 VMRE---NKNPNIVNYLD---SYLVGDE----LWVVMEYLAG--GSLTDVVTETCMDEGQ 117
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + R+ L+ ++FLHS+++IHRD+K N+L+ G +K+ DFG + S +V
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 177
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ YG VDIWS+G + EM P + + L I GTP +
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL 236
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
PE + SAIF D L L + R SA + L+H +
Sbjct: 237 QN-PEKL---------------SAIFRD-------FLNRCLEMDVEKRGSAKELLQHQFL 273
Query: 314 K 314
K
Sbjct: 274 K 274
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 64/312 (20%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVK------------------------LNEDG 64
+IG G+YG V A + +N Y AMK L K + G
Sbjct: 20 EIGKGSYGVVKLAYN-ENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78
Query: 65 IPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK 124
+EI+ILK+LD HPN+V+ +V L D +Y++FE V+Q G ME
Sbjct: 79 PIEQVYQEIAILKKLD---HPNVVKLVEV-----LDDPNEDHLYMVFELVNQ--GPVMEV 128
Query: 125 CPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD 184
LS + + + ++KG+++LH +IIHRD+KP NLL+ G +KIADFG++ F
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 185 -YDMMLTSVVVTLWYRAPEIL---LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQ 240
D +L++ V T + APE L + G +D+W++G ++ V C + E+
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVT---LYCFVFGQCPFMD-ER 244
Query: 241 LKCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPAD 300
+ C+ I + ++ E+P+ D L+ ML NP
Sbjct: 245 IMCLHSKIKSQAL-EFPDQ--------------------PDIAEDLKDLITRMLDKNPES 283
Query: 301 RISAADALEHPY 312
RI + HP+
Sbjct: 284 RIVVPEIKLHPW 295
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 130/293 (44%), Gaps = 43/293 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 21 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 76
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDF 148
R + H VYLI E+ + Y E + ++ + +
Sbjct: 77 RLYGYFHDAT-------RVYLILEYAPRG-EVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 149 LHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNLG 208
HS R+IHRD+KP+NLL+ AG LKIADFG + + TL Y PE++
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 209 YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSFE 268
+ VD+WS+G + E P F A+T E K I
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI------------------------ 223
Query: 269 QYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 224 --SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 164/329 (49%), Gaps = 41/329 (12%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
++Y A T+Q D Y+ + ++G G Y VF+ ++ N +K +K+
Sbjct: 39 WDYEALTVQWGEQDD-------YEVVRKVGRGKYSEVFEGINVNNN------EKCIIKIL 85
Query: 62 EDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGS 120
+ REI IL+ L PNIV+ D++ D+ T LIFE+V+ D
Sbjct: 86 KPVKKKKIKREIKILQNLXG--GPNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-- 136
Query: 121 YMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGL 179
K P L+ ++ ++LK +D+ HS I+HRD+KP N++I L++ D+GL
Sbjct: 137 ---KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL 193
Query: 180 AKTFDYDMMLTSVVVTLWYRAPEILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTE 237
A+ + V + +++ PE+L++L Y +D+WS+GC+ A M +R P F
Sbjct: 194 AEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 253
Query: 238 VEQLKCIFRVIGTPSMNEWPENISL-----MWSSFEQYSKVAFSAIFMDC------CSKA 286
+QL I +V+GT +N + + + + ++S+ + FM+ +A
Sbjct: 254 HDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEA 312
Query: 287 NSLLESMLTFNPADRISAADALEHPYFKE 315
L+ +L ++ +R++A +A+ HPYF++
Sbjct: 313 IDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 145/301 (48%), Gaps = 42/301 (13%)
Query: 17 LDLGD--KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+ +GD KKY +IG GA GTV+ A D+ G VA++++ L + + EI
Sbjct: 13 VSVGDPKKKYTRFEKIGQGASGTVYTAMDVAT-GQEVAIRQM--NLQQQPKKELIINEIL 69
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
++++ ++PNIV + D ++ DE ++++ E++ GS + + +
Sbjct: 70 VMRE---NKNPNIVNYLD---SYLVGDE----LWVVMEYLAG--GSLTDVVTETCMDEGQ 117
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL-AKTFDYDMMLTSVV 193
+ + R+ L+ ++FLHS+++IHRD+K N+L+ G +K+ DFG A+ + +V
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV 177
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ YG VDIWS+G + EM P + + L I GTP +
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL 236
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
PE + SAIF D L L + R SA + L+H +
Sbjct: 237 QN-PEKL---------------SAIFRD-------FLNRCLDMDVEKRGSAKELLQHQFL 273
Query: 314 K 314
K
Sbjct: 274 K 274
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 55/299 (18%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNED--GIPMSTLR-EISILKQLDTFEHP 85
++G GA+G V + + ++++ +N+D +PM + EI +LK LD HP
Sbjct: 29 KLGSGAFGDVHLVEERSS-----GLERVIKTINKDRSQVPMEQIEAEIEVLKSLD---HP 80
Query: 86 NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK-----CPPPGLSASKVKELTR 140
NI++ F+V E Y +Y++ E + G +E+ LS V EL +
Sbjct: 81 NIIKIFEVF-------EDYHNMYIVMETCEG--GELLERIVSAQARGKALSEGYVAELMK 131
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
QM+ + + HS ++H+DLKP+N+L + +KI DFGLA+ F D T+ T
Sbjct: 132 QMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTAL 191
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWR-LVPLFCASTEVEQLKCIFRVIGTPSMNEW 256
Y APE+ DIWS G VM + +P S E Q K
Sbjct: 192 YMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT------------ 238
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
Y + ++ +A LL+ MLT +P R SAA L H +FK+
Sbjct: 239 -------------YKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 131/254 (51%), Gaps = 20/254 (7%)
Query: 17 LDLGD--KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+ +GD KKY +IG GA GTV+ A D+ G VA++++ L + + EI
Sbjct: 14 VSVGDPKKKYTRFEKIGQGASGTVYTAMDVAT-GQEVAIRQM--NLQQQPKKELIINEIL 70
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
++++ ++PNIV + D ++ DE ++++ E++ GS + + +
Sbjct: 71 VMRE---NKNPNIVNYLD---SYLVGDE----LWVVMEYLAG--GSLTDVVTETCMDEGQ 118
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + R+ L+ ++FLHS+++IHRD+K N+L+ G +K+ DFG + S +V
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 178
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ YG VDIWS+G + EM P + + L I GTP +
Sbjct: 179 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL 237
Query: 254 NEWPENISLMWSSF 267
PE +S ++ F
Sbjct: 238 QN-PEKLSAIFRDF 250
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 164/329 (49%), Gaps = 41/329 (12%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
++Y A T+Q D Y+ + ++G G Y VF+ ++ N +K +K+
Sbjct: 18 WDYEALTVQWGEQDD-------YEVVRKVGRGKYSEVFEGINVNNN------EKCIIKIL 64
Query: 62 EDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGS 120
+ REI IL+ L PNIV+ D++ D+ T LIFE+V+ D
Sbjct: 65 KPVKKKKIKREIKILQNLXG--GPNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-- 115
Query: 121 YMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGL 179
K P L+ ++ ++LK +D+ HS I+HRD+KP N++I L++ D+GL
Sbjct: 116 ---KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL 172
Query: 180 AKTFDYDMMLTSVVVTLWYRAPEILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTE 237
A+ + V + +++ PE+L++L Y +D+WS+GC+ A M +R P F
Sbjct: 173 AEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 238 VEQLKCIFRVIGTPSMNEWPENISL-----MWSSFEQYSKVAFSAIFMDC------CSKA 286
+QL I +V+GT +N + + + + ++S+ + FM+ +A
Sbjct: 233 HDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEA 291
Query: 287 NSLLESMLTFNPADRISAADALEHPYFKE 315
L+ +L ++ +R++A +A+ HPYF++
Sbjct: 292 IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 164/329 (49%), Gaps = 41/329 (12%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
++Y A T+Q D Y+ + ++G G Y VF+ ++ N +K +K+
Sbjct: 18 WDYEALTVQWGEQDD-------YEVVRKVGRGKYSEVFEGINVNNN------EKCIIKIL 64
Query: 62 EDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGS 120
+ REI IL+ L PNIV+ D++ D+ T LIFE+V+ D
Sbjct: 65 KPVKKKKIKREIKILQNLXG--GPNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-- 115
Query: 121 YMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGL 179
K P L+ ++ ++LK +D+ HS I+HRD+KP N++I L++ D+GL
Sbjct: 116 ---KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL 172
Query: 180 AKTFDYDMMLTSVVVTLWYRAPEILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTE 237
A+ + V + +++ PE+L++L Y +D+WS+GC+ A M +R P F
Sbjct: 173 AEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 238 VEQLKCIFRVIGTPSMNEWPENISL-----MWSSFEQYSKVAFSAIFMDC------CSKA 286
+QL I +V+GT +N + + + + ++S+ + FM+ +A
Sbjct: 233 HDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEA 291
Query: 287 NSLLESMLTFNPADRISAADALEHPYFKE 315
L+ +L ++ +R++A +A+ HPYF++
Sbjct: 292 IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 164/329 (49%), Gaps = 41/329 (12%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
++Y A T+Q D Y+ + ++G G Y VF+ ++ N +K +K+
Sbjct: 18 WDYEALTVQWGEQDD-------YEVVRKVGRGKYSEVFEGINVNNN------EKCIIKIL 64
Query: 62 EDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGS 120
+ REI IL+ L PNIV+ D++ D+ T LIFE+V+ D
Sbjct: 65 KPVKKKKIKREIKILQNLXG--GPNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-- 115
Query: 121 YMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGL 179
K P L+ ++ ++LK +D+ HS I+HRD+KP N++I L++ D+GL
Sbjct: 116 ---KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL 172
Query: 180 AKTFDYDMMLTSVVVTLWYRAPEILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTE 237
A+ + V + +++ PE+L++L Y +D+WS+GC+ A M +R P F
Sbjct: 173 AEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 238 VEQLKCIFRVIGTPSMNEWPENISL-----MWSSFEQYSKVAFSAIFMDC------CSKA 286
+QL I +V+GT +N + + + + ++S+ + FM+ +A
Sbjct: 233 HDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEA 291
Query: 287 NSLLESMLTFNPADRISAADALEHPYFKE 315
L+ +L ++ +R++A +A+ HPYF++
Sbjct: 292 IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 164/329 (49%), Gaps = 41/329 (12%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
++Y A T+Q D Y+ + ++G G Y VF+ ++ N +K +K+
Sbjct: 19 WDYEALTVQWGEQDD-------YEVVRKVGRGKYSEVFEGINVNNN------EKCIIKIL 65
Query: 62 EDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGS 120
+ REI IL+ L PNIV+ D++ D+ T LIFE+V+ D
Sbjct: 66 KPVKKKKIKREIKILQNLXG--GPNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-- 116
Query: 121 YMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGL 179
K P L+ ++ ++LK +D+ HS I+HRD+KP N++I L++ D+GL
Sbjct: 117 ---KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL 173
Query: 180 AKTFDYDMMLTSVVVTLWYRAPEILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTE 237
A+ + V + +++ PE+L++L Y +D+WS+GC+ A M +R P F
Sbjct: 174 AEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 233
Query: 238 VEQLKCIFRVIGTPSMNEWPENISL-----MWSSFEQYSKVAFSAIFMDC------CSKA 286
+QL I +V+GT +N + + + + ++S+ + FM+ +A
Sbjct: 234 HDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEA 292
Query: 287 NSLLESMLTFNPADRISAADALEHPYFKE 315
L+ +L ++ +R++A +A+ HPYF++
Sbjct: 293 IDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 164/329 (49%), Gaps = 41/329 (12%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
++Y A T+Q D Y+ + ++G G Y VF+ ++ N +K +K+
Sbjct: 18 WDYEALTVQWGEQDD-------YEVVRKVGRGKYSEVFEGINVNNN------EKCIIKIL 64
Query: 62 EDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGS 120
+ REI IL+ L PNIV+ D++ D+ T LIFE+V+ D
Sbjct: 65 KPVKKKKIKREIKILQNL--MGGPNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-- 115
Query: 121 YMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGL 179
K P L+ ++ ++LK +D+ HS I+HRD+KP N++I L++ D+GL
Sbjct: 116 ---KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL 172
Query: 180 AKTFDYDMMLTSVVVTLWYRAPEILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTE 237
A+ + V + +++ PE+L++L Y +D+WS+GC+ A M +R P F
Sbjct: 173 AEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 238 VEQLKCIFRVIGTPSMNEWPENISL-----MWSSFEQYSKVAFSAIFMDC------CSKA 286
+QL I +V+GT +N + + + + ++S+ + FM+ +A
Sbjct: 233 HDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEA 291
Query: 287 NSLLESMLTFNPADRISAADALEHPYFKE 315
L+ +L ++ +R++A +A+ HPYF++
Sbjct: 292 IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 26/246 (10%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
PNIV+ D++ D+ T LIFE+V+ D K P L+ ++ ++L
Sbjct: 88 PNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-----KVLYPTLTDYDIRYYIYELL 137
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
K +D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE
Sbjct: 138 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 197
Query: 203 ILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
+L++L Y +D+WS+GC+ A M +R P F +QL I +V+GT +N +
Sbjct: 198 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 257
Query: 261 SL-----MWSSFEQYSKVAFSAIFMDC------CSKANSLLESMLTFNPADRISAADALE 309
+ + + ++S+ + FM+ +A L+ +L ++ +R++A +A+
Sbjct: 258 RIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT 316
Query: 310 HPYFKE 315
HPYF++
Sbjct: 317 HPYFQQ 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 26/246 (10%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
PNIV+ D++ D+ T LIFE+V+ D K P L+ ++ ++L
Sbjct: 86 PNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-----KVLYPTLTDYDIRYYIYELL 135
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
K +D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 203 ILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
+L++L Y +D+WS+GC+ A M +R P F +QL I +V+GT +N +
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 255
Query: 261 SL-----MWSSFEQYSKVAFSAIFMDC------CSKANSLLESMLTFNPADRISAADALE 309
+ + + ++S+ + FM+ +A L+ +L ++ +R++A +A+
Sbjct: 256 RIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT 314
Query: 310 HPYFKE 315
HPYF++
Sbjct: 315 HPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 26/246 (10%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
PNIV+ D++ D+ T LIFE+V+ D K P L+ ++ ++L
Sbjct: 86 PNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-----KVLYPTLTDYDIRYYIYELL 135
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
K +D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 203 ILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
+L++L Y +D+WS+GC+ A M +R P F +QL I +V+GT +N +
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 255
Query: 261 SL-----MWSSFEQYSKVAFSAIFMDC------CSKANSLLESMLTFNPADRISAADALE 309
+ + + ++S+ + FM+ +A L+ +L ++ +R++A +A+
Sbjct: 256 RIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT 314
Query: 310 HPYFKE 315
HPYF++
Sbjct: 315 HPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 26/246 (10%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
PNIV+ D++ D+ T LIFE+V+ D K P L+ ++ ++L
Sbjct: 87 PNIVKLLDIV-----RDQHSKTPSLIFEYVNNTDF-----KVLYPTLTDYDIRYYIYELL 136
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA-GGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
K +D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 196
Query: 203 ILLNL-GYGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
+L++L Y +D+WS+GC+ A M +R P F +QL I +V+GT +N +
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 256
Query: 261 SL-----MWSSFEQYSKVAFSAIFMDC------CSKANSLLESMLTFNPADRISAADALE 309
+ + + ++S+ + FM+ +A L+ +L ++ +R++A +A+
Sbjct: 257 RIELDPQLEALVGRHSRKPWLK-FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT 315
Query: 310 HPYFKE 315
HPYF++
Sbjct: 316 HPYFQQ 321
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 129/286 (45%), Gaps = 45/286 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ Q+K +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 19 LGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 74
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H VYLI E+ LG+ Y E + ++ +
Sbjct: 75 RLYGYFHDAT-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS R+IHRD+KP+NLL+ AG LKIADFG + + TL Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + E P F A+T E K I
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------------- 221
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPY 312
S+V F+ F D ++ A L+ +L NP+ R + LEHP+
Sbjct: 222 ---SRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 45/294 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V+ AR+ +N +A+K L + +L + G+ RE+ I L HPNI+
Sbjct: 16 LGKGKFGNVYLARE-KNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNIL 71
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGS-YMEKCPPPGLSASKVKELTRQMLKGVD 147
R + H + VYLI E+ LG+ Y E + ++ +
Sbjct: 72 RLYGYFHDST-------RVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ HS ++IHRD+KP+NLL+ AG LKIADFG + ++ TL Y PE++
Sbjct: 123 YCHSKKVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
+ VD+WS+G + C ++G P P + ++
Sbjct: 182 MHDEKVDLWSLGVL---------------------CYEFLVGKP-----PFEANTYQDTY 215
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKEKENEP 320
++ S+V F+ F D ++ A L+ +L NP+ R + LEHP+ ++P
Sbjct: 216 KRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 44/288 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ V++A + G VA+K + K + + G+ E+ I QL +HP+I+
Sbjct: 19 LGKGSFAGVYRAESIHT-GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL---KHPSIL 74
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ N D Y VYL+ E + ++ Y++ P S ++ + Q++ G+
Sbjct: 75 ELY-----NYFEDSNY--VYLVLEMCHNGEMNRYLKNRVKP-FSENEARHFMHQIITGML 126
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD--YDMMLTSVVVTLWYRAPEILL 205
+LHSH I+HRDL NLL+TR +KIADFGLA ++ T + T Y +PEI
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIAT 185
Query: 206 NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWS 265
+G D+WS+GC+ + +IG P + +L
Sbjct: 186 RSAHGLESDVWSLGCMFYTL---------------------LIGRPPFDTDTVKNTLNKV 224
Query: 266 SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
Y +F +I +A L+ +L NPADR+S + L+HP+
Sbjct: 225 VLADYEMPSFLSI------EAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 133/254 (52%), Gaps = 20/254 (7%)
Query: 17 LDLGD--KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+ +GD KKY +IG GA GTV+ A D+ G VA++++ L + + EI
Sbjct: 14 VSVGDPKKKYTRFEKIGQGASGTVYTAMDVAT-GQEVAIRQM--NLQQQPKKELIINEIL 70
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
++++ ++PNIV + D ++ DE ++++ E++ GS + + +
Sbjct: 71 VMRE---NKNPNIVNYLD---SYLVGDE----LWVVMEYLAG--GSLTDVVTETCMDEGQ 118
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL-AKTFDYDMMLTSVV 193
+ + R+ L+ ++FLHS+++IHR++K N+L+ G +K+ DFG A+ +++V
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 178
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ YG VDIWS+G + EM P + + L I GTP +
Sbjct: 179 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL 237
Query: 254 NEWPENISLMWSSF 267
PE +S ++ F
Sbjct: 238 QN-PEKLSAIFRDF 250
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 127/240 (52%), Gaps = 22/240 (9%)
Query: 9 IQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMS 68
+Q+L D +L + +L +IG G++G VFK D N+ V K+ +
Sbjct: 13 MQNLKADPEEL----FTKLEKIGKGSFGEVFKGID--NRTQKVVAIKIIDLEEAEDEIED 66
Query: 69 TLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
+EI++L Q D+ P + +++ + L D + +++I E++ GS ++ P
Sbjct: 67 IQQEITVLSQCDS---PYVTKYYG----SYLKDTK---LWIIMEYLGG--GSALDLLEPG 114
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDM 187
L +++ + R++LKG+D+LHS + IHRD+K N+L++ G +K+ADFG+A D +
Sbjct: 115 PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
V T ++ APE++ Y + DIWS+G E+ R P +E+ +K +F +
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP---PHSELHPMKVLFLI 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 129/239 (53%), Gaps = 19/239 (7%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
++L S+D ++ + +L +IG G++G VFK D N+ V K+ +
Sbjct: 16 ENLYFQSMD-PEELFTKLEKIGKGSFGEVFKGID--NRTQKVVAIKIIDLEEAEDEIEDI 72
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG 129
+EI++L Q D+ P + +++ + L D + +++I E++ GS ++ P
Sbjct: 73 QQEITVLSQCDS---PYVTKYYG----SYLKDTK---LWIIMEYLGG--GSALDLLEPGP 120
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMM 188
L +++ + R++LKG+D+LHS + IHRD+K N+L++ G +K+ADFG+A D +
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 180
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
+ V T ++ APE++ Y + DIWS+G E+ R P +E+ +K +F +
Sbjct: 181 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP---PHSELHPMKVLFLI 236
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 121/225 (53%), Gaps = 18/225 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ +L +IG G++G VFK D N+ V K+ + +EI++L Q D+
Sbjct: 9 FTKLEKIGKGSFGEVFKGID--NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-- 64
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
P + +++ + L D + +++I E++ GS ++ P L +++ + R++L
Sbjct: 65 -PYVTKYYG----SYLKDTK---LWIIMEYLGG--GSALDLLEPGPLDETQIATILREIL 114
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLTSVVVTLWYRAPE 202
KG+D+LHS + IHRD+K N+L++ G +K+ADFG+A D + + V T ++ APE
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 174
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
++ Y + DIWS+G E+ R P +E+ +K +F +
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEP---PHSELHPMKVLFLI 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 120/225 (53%), Gaps = 18/225 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ +L +IG G++G VFK D N+ V K+ + +EI++L Q D+
Sbjct: 9 FTKLEKIGKGSFGEVFKGID--NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-- 64
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
P + +++ + L D + +++I E++ GS ++ P L +++ + R++L
Sbjct: 65 -PYVTKYYG----SYLKDTK---LWIIMEYLGG--GSALDLLEPGPLDETQIATILREIL 114
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLTSVVVTLWYRAPE 202
KG+D+LHS + IHRD+K N+L++ G +K+ADFG+A D + V T ++ APE
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 174
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
++ Y + DIWS+G E+ R P +E+ +K +F +
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEP---PHSELHPMKVLFLI 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 22/253 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
Y+ L IG G+YG K R ++ G + K+L + + E+++L++L +
Sbjct: 8 YEVLYTIGTGSYGRCQKIRR-KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL---K 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPG--LSASKVKELTR 140
HPNIVR++D I D T+Y++ E+ + DL S + K L V +
Sbjct: 64 HPNIVRYYDRI-----IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 141 QMLKGVDFLH-----SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV- 194
Q+ + H H ++HRDLKP N+ + +K+ DFGLA+ ++D V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG 178
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCI----FRVIGT 250
T +Y +PE + + Y DIWS+GC++ E+ L+P F A ++ E I FR I
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY 238
Query: 251 PSMNEWPENISLM 263
+E E I+ M
Sbjct: 239 RYSDELNEIITRM 251
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 22/253 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
Y+ L IG G+YG K R ++ G + K+L + + E+++L++L +
Sbjct: 8 YEVLYTIGTGSYGRCQKIRR-KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL---K 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPG--LSASKVKELTR 140
HPNIVR++D I D T+Y++ E+ + DL S + K L V +
Sbjct: 64 HPNIVRYYDRI-----IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 141 QMLKGVDFLH-----SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV- 194
Q+ + H H ++HRDLKP N+ + +K+ DFGLA+ ++D V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG 178
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCI----FRVIGT 250
T +Y +PE + + Y DIWS+GC++ E+ L+P F A ++ E I FR I
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY 238
Query: 251 PSMNEWPENISLM 263
+E E I+ M
Sbjct: 239 RYSDELNEIITRM 251
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 92 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLRQT----LTDYDIRFYMYEILK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 312 YF 313
YF
Sbjct: 323 YF 324
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 158/325 (48%), Gaps = 37/325 (11%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
++Y + ++ N D L + ++G G Y VF+A ++ N +K+ VK+
Sbjct: 24 WDYESHVVEWGNQDDYQL-------VRKLGRGKYSEVFEAINITNN------EKVAVKIL 70
Query: 62 EDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY 121
+ REI IL+ L PNI+ D++ D T L+FEHV+
Sbjct: 71 KPVKKKKIKREIKILENLRGG--PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQ 123
Query: 122 MEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLA 180
+ + L+ ++ ++LK +D+ HS I+HRD+KP N+LI L++ D+GLA
Sbjct: 124 LYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA 179
Query: 181 KTFDYDMMLTSVVVTLWYRAPEILLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEV 238
+ + V + +++ PE+L++ Y +D+WS+GC++A M +R P F
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 239 EQLKCIFRVIGTPSMNEWPE----------NISLMWSSFEQYSKVAFSAIFMDCCSKANS 288
+QL I +V+GT + ++ + N L S +++ + S +A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD 299
Query: 289 LLESMLTFNPADRISAADALEHPYF 313
L+ +L ++ R++A +A+EHPYF
Sbjct: 300 FLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 136/302 (45%), Gaps = 67/302 (22%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G GA+G V+KA++ + G A K + K E+ + EI IL T +HP IV
Sbjct: 26 ELGDGAFGKVYKAKN-KETGALAAAKVIETKSEEEL--EDYIVEIEILA---TCDHPYIV 79
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCP-----------PPGLSASKVKE 137
+ + D L +E CP GL+ +++
Sbjct: 80 KLLGAYYH------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 121
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL-AKTFDYDMMLTSVVVTL 196
+ RQML+ ++FLHS RIIHRDLK N+L+T G +++ADFG+ AK S + T
Sbjct: 122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTP 181
Query: 197 WYRAPEILL-----NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT- 250
++ APE+++ + Y DIWS+G + EM ++ P E+ ++ + ++ +
Sbjct: 182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP---PHHELNPMRVLLKIAKSD 238
Query: 251 PSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEH 310
P P S+ F + K+A L NP R SAA LEH
Sbjct: 239 PPTLLTPSKWSV---EFRDFLKIA-------------------LDKNPETRPSAAQLLEH 276
Query: 311 PY 312
P+
Sbjct: 277 PF 278
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 136/302 (45%), Gaps = 67/302 (22%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G GA+G V+KA++ + G A K + K E+ + EI IL T +HP IV
Sbjct: 18 ELGDGAFGKVYKAKN-KETGALAAAKVIETKSEEEL--EDYIVEIEILA---TCDHPYIV 71
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-----------GLSASKVKE 137
+ + D L +E CP GL+ +++
Sbjct: 72 KLLGAYYH------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 113
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL-AKTFDYDMMLTSVVVTL 196
+ RQML+ ++FLHS RIIHRDLK N+L+T G +++ADFG+ AK S + T
Sbjct: 114 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTP 173
Query: 197 WYRAPEILL-----NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGT- 250
++ APE+++ + Y DIWS+G + EM ++ P E+ ++ + ++ +
Sbjct: 174 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP---PHHELNPMRVLLKIAKSD 230
Query: 251 PSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEH 310
P P S+ F + K+A L NP R SAA LEH
Sbjct: 231 PPTLLTPSKWSV---EFRDFLKIA-------------------LDKNPETRPSAAQLLEH 268
Query: 311 PY 312
P+
Sbjct: 269 PF 270
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 91 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 141
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321
Query: 312 YF 313
YF
Sbjct: 322 YF 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 91 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 141
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321
Query: 312 YF 313
YF
Sbjct: 322 YF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 92 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 312 YF 313
YF
Sbjct: 323 YF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 92 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 312 YF 313
YF
Sbjct: 323 YF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 97 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 147
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 148 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 207
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 208 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 267
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 268 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 327
Query: 312 YF 313
YF
Sbjct: 328 YF 329
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 92 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 312 YF 313
YF
Sbjct: 323 YF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 92 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 312 YF 313
YF
Sbjct: 323 YF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 90 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 140
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 141 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 200
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 201 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 260
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 320
Query: 312 YF 313
YF
Sbjct: 321 YF 322
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 50/307 (16%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNE------DGIPMSTLREISI 75
+KYD IG G V + + G+ A+K + V + + +T RE I
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVH-RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYM-EKCPPPGLSAS 133
L+Q+ HP+I+ D S E ++L+F+ + + +L Y+ EK LS
Sbjct: 153 LRQVAG--HPHIITLID-------SYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEK 200
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+ + + R +L+ V FLH++ I+HRDLKP+N+L+ ++++DFG + + L +
Sbjct: 201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC 260
Query: 194 VTLWYRAPEIL------LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
T Y APEIL + GYG VD+W+ G ++ + P F ++ L+ I
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG 320
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
S EW D S L+ +L +P R++A A
Sbjct: 321 QYQFSSPEWD-----------------------DRSSTVKDLISRLLQVDPEARLTAEQA 357
Query: 308 LEHPYFK 314
L+HP+F+
Sbjct: 358 LQHPFFE 364
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 92 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 312 YF 313
YF
Sbjct: 323 YF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 92 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 312 YF 313
YF
Sbjct: 323 YF 324
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 129/267 (48%), Gaps = 46/267 (17%)
Query: 21 DKKYDE---LCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
D +YDE +G G YG V+ RDL N+ +A+K++ + + P+ EI++ K
Sbjct: 18 DYEYDENGDRVVLGKGTYGIVYAGRDLSNQVR-IAIKEIPERDSRYSQPLH--EEIALHK 74
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA---SK 134
L +H NIV++ +N + +ME+ P LSA SK
Sbjct: 75 HL---KHKNIVQYLGSFSENGF------------------IKIFMEQVPGGSLSALLRSK 113
Query: 135 VKEL----------TRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTF 183
L T+Q+L+G+ +LH ++I+HRD+K N+LI T +G LKI+DFG +K
Sbjct: 114 WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 173
Query: 184 -DYDMMLTSVVVTLWYRAPEILLN--LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQ 240
+ + TL Y APEI+ GYG DIWS+GC + EM P F E +
Sbjct: 174 AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA 233
Query: 241 LKCIFRVIGTPSMNEWPENISLMWSSF 267
+F+V E PE++S +F
Sbjct: 234 --AMFKVGMFKVHPEIPESMSAEAKAF 258
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 92 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 312 YF 313
YF
Sbjct: 323 YF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNI+ D++ D T L+FEHV+ + + L+ ++ ++LK
Sbjct: 92 PNIITLADIV-----KDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG-GLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+D+ HS I+HRD+KP N++I L++ D+GLA+ + V + +++ PE+
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LLNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE--- 258
L++ Y +D+WS+GC++A M +R P F +QL I +V+GT + ++ +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 259 -------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
N L S +++ + S +A L+ +L ++ R++A +A+EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 312 YF 313
YF
Sbjct: 323 YF 324
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 127/267 (47%), Gaps = 46/267 (17%)
Query: 21 DKKYDE---LCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
D +YDE +G G YG V+ RDL N+ +A+K++ + + P+ EI++ K
Sbjct: 4 DYEYDENGDRVVLGKGTYGIVYAGRDLSNQVR-IAIKEIPERDSRYSQPLH--EEIALHK 60
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSA----- 132
L +H NIV++ +N + +ME+ P LSA
Sbjct: 61 HL---KHKNIVQYLGSFSENGF------------------IKIFMEQVPGGSLSALLRSK 99
Query: 133 --------SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLI-TRAGGLKIADFGLAKTF 183
+ T+Q+L+G+ +LH ++I+HRD+K N+LI T +G LKI+DFG +K
Sbjct: 100 WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 159
Query: 184 -DYDMMLTSVVVTLWYRAPEILLN--LGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQ 240
+ + TL Y APEI+ GYG DIWS+GC + EM P F E +
Sbjct: 160 AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA 219
Query: 241 LKCIFRVIGTPSMNEWPENISLMWSSF 267
+F+V E PE++S +F
Sbjct: 220 --AMFKVGMFKVHPEIPESMSAEAKAF 244
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ E+ IG G +G VFKA+ + YV RVK N + RE+ L +LD
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIR---RVKYNNEKAE----REVKALAKLD--- 63
Query: 84 HPNIVRF----------------------FDVIHQNILSDERYLTVYLIFEHVDQD-LGS 120
H NIV + +D + S + +++ E D+ L
Sbjct: 64 HVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ 123
Query: 121 YMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA 180
++EK L EL Q+ KGVD++HS ++IHRDLKP N+ + +KI DFGL
Sbjct: 124 WIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 181 KTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ D T TL Y +PE + + YG VD++++G ++AE+
Sbjct: 184 TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 22/253 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
Y+ L IG G+YG K R ++ G + K+L + + E+++L++L +
Sbjct: 8 YEVLYTIGTGSYGRCQKIRR-KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL---K 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPG--LSASKVKELTR 140
HPNIVR++D I D T+Y++ E+ + DL S + K L V +
Sbjct: 64 HPNIVRYYDRI-----IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 141 QMLKGVDFLH-----SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVV 194
Q+ + H H ++HRDLKP N+ + +K+ DFGLA+ ++D V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG 178
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCI----FRVIGT 250
T +Y +PE + + Y DIWS+GC++ E+ L+P F A ++ E I FR I
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY 238
Query: 251 PSMNEWPENISLM 263
+E E I+ M
Sbjct: 239 RYSDELNEIITRM 251
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 48/302 (15%)
Query: 24 YDELCQIGCGAYGTV----FKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQL 79
YD ++G GA+ V K L+ + KKL + + RE I ++L
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-----KLEREARICRKL 62
Query: 80 DTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL-SASKVKEL 138
+HPNIVR D I + YL+F+ V G E S +
Sbjct: 63 ---QHPNIVRLHDSIQEESFH-------YLVFDLVTG--GELFEDIVAREFYSEADASHC 110
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L+ + + HS+ I+HR+LKP+NLL+ + +K+ADFGLA + T
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
Y +PE+L Y PVDIW+ G ++ + ++G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYIL---------------------LVGYPPF-- 207
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
W E+ +++ + + S + +A SL++SMLT NP RI+A AL+ P+
Sbjct: 208 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 267
Query: 316 KE 317
+E
Sbjct: 268 RE 269
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 48/302 (15%)
Query: 24 YDELCQIGCGAYGTV----FKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQL 79
YD ++G GA+ V K L+ + KKL + + RE I ++L
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-----KLEREARICRKL 61
Query: 80 DTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL-SASKVKEL 138
+HPNIVR D I + YL+F+ V G E S +
Sbjct: 62 ---QHPNIVRLHDSIQEESFH-------YLVFDLVTG--GELFEDIVAREFYSEADASHC 109
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L+ + + HS+ I+HR+LKP+NLL+ + +K+ADFGLA + T
Sbjct: 110 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 169
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
Y +PE+L Y PVDIW+ G ++ + ++G P
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYIL---------------------LVGYPPF-- 206
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
W E+ +++ + + S + +A SL++SMLT NP RI+A AL+ P+
Sbjct: 207 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 266
Query: 316 KE 317
+E
Sbjct: 267 RE 268
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 48/302 (15%)
Query: 24 YDELCQIGCGAYGTV----FKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQL 79
YD ++G GA+ V K L+ + KKL + + RE I ++L
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-----KLEREARICRKL 62
Query: 80 DTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL-SASKVKEL 138
+HPNIVR D I + YL+F+ V G E S +
Sbjct: 63 ---QHPNIVRLHDSIQEESFH-------YLVFDLVTG--GELFEDIVAREFYSEADASHC 110
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L+ + + HS+ I+HR+LKP+NLL+ + +K+ADFGLA + T
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
Y +PE+L Y PVDIW+ G ++ + ++G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYIL---------------------LVGYPPF-- 207
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
W E+ +++ + + S + +A SL++SMLT NP RI+A AL+ P+
Sbjct: 208 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 267
Query: 316 KE 317
+E
Sbjct: 268 RE 269
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVA----MKKLRVKLNEDGIPMSTLREISILKQ 78
+Y ++G GA+ V + + Y A KKL + ++ RE I +
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-----KLEREARICRL 59
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK-CPPPGLSASKVKE 137
L +HPNIVR D I S+E + YL+F+ V G E S +
Sbjct: 60 L---KHPNIVRLHDSI-----SEEGFH--YLVFDLVTG--GELFEDIVAREYYSEADASH 107
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMML-TSVV 193
+Q+L+ V+ H + I+HRDLKP+NLL+ ++ +K+ADFGLA D
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T Y +PE+L YG PVD+W+ G ++ + ++G P
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDMWACGVILYIL---------------------LVGYPPF 206
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
W E+ ++ + + S + +A L+ MLT NPA RI+A++AL+HP+
Sbjct: 207 --WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
Query: 314 KEK 316
++
Sbjct: 265 CQR 267
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 136/303 (44%), Gaps = 49/303 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVA----MKKLRVKLNEDGIPMSTLREISILKQ 78
+Y ++G GA+ V + + Y A KKL + ++ RE I +
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-----KLEREARICRL 59
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK-CPPPGLSASKVKE 137
L +HPNIVR D I S+E + YL+F+ V G E S +
Sbjct: 60 L---KHPNIVRLHDSI-----SEEGFH--YLVFDLVTG--GELFEDIVAREYYSEADASH 107
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMML-TSVV 193
+Q+L+ V+ H + I+HRDLKP+NLL+ ++ +K+ADFGLA D
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T Y +PE+L YG PVD+W+ G ++ ++G P
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDMWACGVIL---------------------YILLVGYPPF 206
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
W E+ ++ + + S + +A L+ MLT NPA RI+A++AL+HP+
Sbjct: 207 --WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
Query: 314 KEK 316
++
Sbjct: 265 CQR 267
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 135/291 (46%), Gaps = 47/291 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V K + G+ VA+K L R K+ + REI LK F HP+I+
Sbjct: 24 LGVGTFGKV-KVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK---LFRHPHII 79
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ + VI + SD ++++ E+V +L Y+ C L + + L +Q+L GVD
Sbjct: 80 KLYQVI--STPSD-----IFMVMEYVSGGELFDYI--CKNGRLDEKESRRLFQQILSGVD 130
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ H H ++HRDLKP+N+L+ KIADFGL+ L + Y APE++
Sbjct: 131 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGR 190
Query: 208 GYGTP-VDIWSIGCVMAEMWRLVPLFCAST--EVEQLKCIFRVIGTPSMNEWPENISLMW 264
Y P VDIWS G + L L C + + + + +F+ I
Sbjct: 191 LYAGPEVDIWSSGVI------LYALLCGTLPFDDDHVPTLFKKIC--------------- 229
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
+ ++ +++ SLL+ ML +P R + D EH +FK+
Sbjct: 230 ------DGIFYTPQYLN--PSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 122/225 (54%), Gaps = 18/225 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ +L +IG G++G V+K D K VA+K + ++ ED I +EI++L Q D+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTK-EVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDS-- 76
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
P I R+F S + +++I E++ GS ++ P L + + + R++L
Sbjct: 77 -PYITRYFG-------SYLKSTKLWIIMEYLGG--GSALDLLKPGPLEETYIATILREIL 126
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLTSVVVTLWYRAPE 202
KG+D+LHS R IHRD+K N+L++ G +K+ADFG+A D + V T ++ APE
Sbjct: 127 KGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 186
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
++ Y DIWS+G E+ + P ++++ ++ +F +
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEP---PNSDLHPMRVLFLI 228
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 132/302 (43%), Gaps = 48/302 (15%)
Query: 24 YDELCQIGCGAYGTV----FKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQL 79
YD ++G GA+ V K L+ + KKL + + RE I ++L
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-----KLEREARICRKL 85
Query: 80 DTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL-SASKVKEL 138
+HPNIVR D I + YL+F+ V G E S +
Sbjct: 86 ---QHPNIVRLHDSIQEESFH-------YLVFDLVTG--GELFEDIVAREFYSEADASHC 133
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L+ + + HS+ I+HR+LKP+NLL+ + +K+ADFGLA + T
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 193
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
Y +PE+L Y PVDIW+ G ++ ++G P
Sbjct: 194 PGYLSPEVLKKDPYSKPVDIWACGVIL---------------------YILLVGYPPF-- 230
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
W E+ +++ + + S + +A SL++SMLT NP RI+A AL+ P+
Sbjct: 231 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 290
Query: 316 KE 317
+E
Sbjct: 291 RE 292
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 132/297 (44%), Gaps = 49/297 (16%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVA----MKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
++G GA+ V + Y A KKL + ++ RE I + L +H
Sbjct: 38 ELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-----KLEREARICRLL---KH 89
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK-CPPPGLSASKVKELTRQML 143
PNIVR D I S+E + YL+F+ V G E S + Q+L
Sbjct: 90 PNIVRLHDSI-----SEEGFH--YLVFDLVTG--GELFEDIVAREYYSEADASHCIHQIL 140
Query: 144 KGVDFLHSHRIIHRDLKPQNLLIT---RAGGLKIADFGLAKTFDYDMML-TSVVVTLWYR 199
+ V+ +H H I+HRDLKP+NLL+ + +K+ADFGLA + T Y
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYL 200
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
+PE+L YG PVDIW+ G ++ + ++G P W E+
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVILYIL---------------------LVGYPPF--WDED 237
Query: 260 ISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEK 316
++ + + S + +A +L+ MLT NPA RI+A AL+HP+ ++
Sbjct: 238 QHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQR 294
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLREI 73
D +G+ Y + +G G++G V A G VA+K + K L + + REI
Sbjct: 9 DGAHIGN--YQIVKTLGEGSFGKVKLAYH-TTTGQKVALKIINKKVLAKSDMQGRIEREI 65
Query: 74 SILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSAS 133
S L+ L HP+I++ +DVI DE + ++ E+ +L Y+ +S
Sbjct: 66 SYLRLL---RHPHIIKLYDVIKS---KDE----IIMVIEYAGNELFDYI--VQRDKMSEQ 113
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+ + +Q++ V++ H H+I+HRDLKP+NLL+ +KIADFGL+ L +
Sbjct: 114 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 173
Query: 194 VTLWYRAPEILLNLGYGTP-VDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTP 251
+ Y APE++ Y P VD+WS G ++ M R +P + E + +F+
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-----DDESIPVLFK----- 223
Query: 252 SMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
NIS + ++ A L++ ML NP +RIS + ++
Sbjct: 224 -------NISNGVYTLPKF-----------LSPGAAGLIKRMLIVNPLNRISIHEIMQDD 265
Query: 312 YFK 314
+FK
Sbjct: 266 WFK 268
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 43/299 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G YG V+K R ++ G A+K + V +E+ +EI++LK+ H NI
Sbjct: 32 VGNGTYGQVYKGRHVKT-GQLAAIKVMDVTGDEE---EEIKQEINMLKKYS--HHRNIAT 85
Query: 90 FFDV-IHQNI--LSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
++ I +N + D+ +L + DL ++ L + + R++L+G+
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL---IKNTKGNTLKEEWIAYICREILRGL 142
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-MLTSVVVTLWYRAPEILL 205
LH H++IHRD+K QN+L+T +K+ DFG++ D + + + T ++ APE++
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 206 -----NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
+ Y D+WS+G EM P C ++ ++ +F + P+ P
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLC---DMHPMRALFLIPRNPA----PRLK 255
Query: 261 SLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENE 319
S WS K S +ES L N + R + ++HP+ +++ NE
Sbjct: 256 SKKWS------------------KKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNE 296
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLREI 73
D +G+ Y + +G G++G V A G VA+K + K L + + REI
Sbjct: 8 DGAHIGN--YQIVKTLGEGSFGKVKLAYH-TTTGQKVALKIINKKVLAKSDMQGRIEREI 64
Query: 74 SILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSAS 133
S L+ L HP+I++ +DVI DE + ++ E+ +L Y+ +S
Sbjct: 65 SYLRLL---RHPHIIKLYDVIKS---KDE----IIMVIEYAGNELFDYI--VQRDKMSEQ 112
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+ + +Q++ V++ H H+I+HRDLKP+NLL+ +KIADFGL+ L +
Sbjct: 113 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172
Query: 194 VTLWYRAPEILLNLGYGTP-VDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTP 251
+ Y APE++ Y P VD+WS G ++ M R +P + E + +F+
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-----DDESIPVLFK----- 222
Query: 252 SMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
NIS + ++ A L++ ML NP +RIS + ++
Sbjct: 223 -------NISNGVYTLPKF-----------LSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264
Query: 312 YFK 314
+FK
Sbjct: 265 WFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 44/294 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLREISILKQLDTF 82
Y + +G G++G V A G VA+K + K L + + REIS L+ L
Sbjct: 6 YQIVKTLGEGSFGKVKLAYH-TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL--- 61
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
HP+I++ +DVI DE + ++ E+ +L Y+ + +S + + +Q+
Sbjct: 62 RHPHIIKLYDVIKS---KDE----IIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQI 112
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
+ V++ H H+I+HRDLKP+NLL+ +KIADFGL+ L + + Y APE
Sbjct: 113 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 172
Query: 203 ILLNLGYGTP-VDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
++ Y P VD+WS G ++ M R +P + E + +F+ NI
Sbjct: 173 VISGKLYAGPEVDVWSCGVILYVMLCRRLPF-----DDESIPVLFK------------NI 215
Query: 261 SLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
S + ++ A L++ ML NP +RIS + ++ +FK
Sbjct: 216 SNGVYTLPKF-----------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 142/303 (46%), Gaps = 46/303 (15%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLREI 73
D +G+ Y + +G G++G V A G VA+K + K L + + REI
Sbjct: 3 DGAHIGN--YQIVKTLGEGSFGKVKLAYH-TTTGQKVALKIINKKVLAKSDMQGRIEREI 59
Query: 74 SILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSAS 133
S L+ L HP+I++ +DVI DE + ++ E+ +L Y+ + +S
Sbjct: 60 SYLRLL---RHPHIIKLYDVIKS---KDE----IIMVIEYAGNELFDYIVQ--RDKMSEQ 107
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+ + +Q++ V++ H H+I+HRDLKP+NLL+ +KIADFGL+ L +
Sbjct: 108 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 167
Query: 194 VTLWYRAPEILLNLGYGTP-VDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTP 251
+ Y APE++ Y P VD+WS G ++ M R +P + E + +F+
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-----DDESIPVLFK----- 217
Query: 252 SMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHP 311
NIS + ++ A L++ ML NP +RIS + ++
Sbjct: 218 -------NISNGVYTLPKF-----------LSPGAAGLIKRMLIVNPLNRISIHEIMQDD 259
Query: 312 YFK 314
+FK
Sbjct: 260 WFK 262
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ E+ IG G +G VFKA+ + YV RVK N + RE+ L +LD
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIK---RVKYNNE----KAEREVKALAKLD--- 62
Query: 84 HPNIVRF------FDV---IHQNILSDERYLTVYLIFEHVDQD-LGSYMEKCPPPGLSAS 133
H NIV + FD S + +++ E D+ L ++EK L
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
EL Q+ KGVD++HS ++I+RDLKP N+ + +KI DFGL + D
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK 182
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
TL Y +PE + + YG VD++++G ++AE+
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 129/293 (44%), Gaps = 47/293 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G++G V A KG + A KK+ ED +EI I+K LD HPNI
Sbjct: 34 IGRGSWGEVKIA---VQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSLD---HPNI 85
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL-SASKVKELTRQMLKGV 146
+R ++ N +YL+ E G E+ + S + + +L V
Sbjct: 86 IRLYETFEDNT-------DIYLVMELCTG--GELFERVVHKRVFRESDAARIMKDVLSAV 136
Query: 147 DFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+ H + HRDLKP+N L + LK+ DFGLA F M+ + V T +Y +P++
Sbjct: 137 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 196
Query: 204 LLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLM 263
L L YG D WS G +M + P F A T+ E + I T +W
Sbjct: 197 LEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW------- 248
Query: 264 WSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEK 316
++ +A SL+ +LT +P RI++ ALEH +F+++
Sbjct: 249 ----------------LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 285
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 48/298 (16%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPM---STLREISILKQLD 80
YD L ++G GA+G V + + +VA K P+ + EISI+ QL
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVA------KFINTPYPLDKYTVKNEISIMNQL- 105
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG--LSASKVKEL 138
HP ++ D +++Y V LI E + G ++ +S ++V
Sbjct: 106 --HHPKLINLHDAF------EDKYEMV-LILEFLSG--GELFDRIAAEDYKMSEAEVINY 154
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLL--ITRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
RQ +G+ +H H I+H D+KP+N++ +A +KI DFGLA + D ++ T
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA 214
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEW 256
+ APEI+ G D+W+IG + + + F ++E L+ + R +W
Sbjct: 215 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC-------DW 267
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
++ + AFS++ +A ++++L P R++ DALEHP+ K
Sbjct: 268 ------------EFDEDAFSSV----SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 154/334 (46%), Gaps = 57/334 (17%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVK---LNEDGIPMSTLREISILKQLDTFEHPN 86
IG G++G V KA D + + +VA+K ++ K LN+ I E+ +L+ ++ +H
Sbjct: 62 IGKGSFGQVVKAYD-RVEQEWVAIKIIKNKKAFLNQAQI------EVRLLELMN--KHDT 112
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
++++ V + +L L+FE + +L + G+S + ++ +QM +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLC--LVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 147 DFLHSHR--IIHRDLKPQNLLIT--RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
FL + IIH DLKP+N+L+ + +KI DFG + + + + +YR+PE
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPE 228
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS---MNEWPE- 258
+LL + Y +D+WS+GC++ EM PLF + EV+Q+ I V+G P +++ P+
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKA 288
Query: 259 ------------NISLMWSSFEQYS---------------------KVAFSAIFMDCCSK 285
N+ +Y + S + K
Sbjct: 289 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLK 348
Query: 286 ANSLLESMLTFNPADRISAADALEHPYFKEKENE 319
L+ ML ++P RI AL+H +FK+ +E
Sbjct: 349 FKDLILRMLDYDPKTRIQPYYALQHSFFKKTADE 382
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 129/293 (44%), Gaps = 47/293 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G++G V A KG + A KK+ ED +EI I+K LD HPNI
Sbjct: 17 IGRGSWGEVKIA---VQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSLD---HPNI 68
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL-SASKVKELTRQMLKGV 146
+R ++ N +YL+ E G E+ + S + + +L V
Sbjct: 69 IRLYETFEDNT-------DIYLVMELCTG--GELFERVVHKRVFRESDAARIMKDVLSAV 119
Query: 147 DFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEI 203
+ H + HRDLKP+N L + LK+ DFGLA F M+ + V T +Y +P++
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 179
Query: 204 LLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLM 263
L L YG D WS G +M + P F A T+ E + I T +W
Sbjct: 180 LEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW------- 231
Query: 264 WSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEK 316
++ +A SL+ +LT +P RI++ ALEH +F+++
Sbjct: 232 ----------------LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 154/334 (46%), Gaps = 57/334 (17%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVK---LNEDGIPMSTLREISILKQLDTFEHPN 86
IG G++G V KA D + + +VA+K ++ K LN+ I E+ +L+ ++ +H
Sbjct: 43 IGKGSFGQVVKAYD-RVEQEWVAIKIIKNKKAFLNQAQI------EVRLLELMN--KHDT 93
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
++++ V + +L L+FE + +L + G+S + ++ +QM +
Sbjct: 94 EMKYYIVHLKRHFMFRNHLC--LVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 147 DFLHSHR--IIHRDLKPQNLLIT--RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
FL + IIH DLKP+N+L+ + +KI DFG + + + + +YR+PE
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPE 209
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS---MNEWPE- 258
+LL + Y +D+WS+GC++ EM PLF + EV+Q+ I V+G P +++ P+
Sbjct: 210 VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKA 269
Query: 259 ------------NISLMWSSFEQYS---------------------KVAFSAIFMDCCSK 285
N+ +Y + S + K
Sbjct: 270 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLK 329
Query: 286 ANSLLESMLTFNPADRISAADALEHPYFKEKENE 319
L+ ML ++P RI AL+H +FK+ +E
Sbjct: 330 FKDLILRMLDYDPKTRIQPYYALQHSFFKKTADE 363
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 49/259 (18%)
Query: 68 STLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYM-EKC 125
+TL+E+ IL+++ HPNI++ D N +L+F+ + + +L Y+ EK
Sbjct: 69 ATLKEVDILRKVSG--HPNIIQLKDTYETNTF-------FFLVFDLMKKGELFDYLTEKV 119
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
LS + +++ R +L+ + LH I+HRDLKP+N+L+ +K+ DFG + D
Sbjct: 120 T---LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 186 DMMLTSVVVTLWYRAPEILL------NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
L SV T Y APEI+ + GYG VD+WS G +M + P F ++
Sbjct: 177 GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 240 QLKCIFR---VIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTF 296
L+ I G+P +++ + + + S F L
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRF--------------------------LVV 270
Query: 297 NPADRISAADALEHPYFKE 315
P R +A +AL HP+F++
Sbjct: 271 QPQKRYTAEEALAHPFFQQ 289
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 154/334 (46%), Gaps = 57/334 (17%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVK---LNEDGIPMSTLREISILKQLDTFEHPN 86
IG G++G V KA D + + +VA+K ++ K LN+ I E+ +L+ ++ +H
Sbjct: 62 IGKGSFGQVVKAYD-RVEQEWVAIKIIKNKKAFLNQAQI------EVRLLELMN--KHDT 112
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
++++ V + +L L+FE + +L + G+S + ++ +QM +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLC--LVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 147 DFLHSHR--IIHRDLKPQNLLIT--RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
FL + IIH DLKP+N+L+ + +KI DFG + + + + +YR+PE
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPE 228
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS---MNEWPE- 258
+LL + Y +D+WS+GC++ EM PLF + EV+Q+ I V+G P +++ P+
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKA 288
Query: 259 ------------NISLMWSSFEQYS---------------------KVAFSAIFMDCCSK 285
N+ +Y + S + K
Sbjct: 289 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLK 348
Query: 286 ANSLLESMLTFNPADRISAADALEHPYFKEKENE 319
L+ ML ++P RI AL+H +FK+ +E
Sbjct: 349 FKDLILRMLDYDPKTRIQPYYALQHSFFKKTADE 382
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 136/314 (43%), Gaps = 52/314 (16%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPM 67
QS+ D ++G+ ++G G + V K R Y A +KK R+ + G+
Sbjct: 21 QSMVEDHYEMGE-------ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSR 73
Query: 68 STL-REISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKC 125
+ RE++IL+++ HPNI+ D+ E V LI E V +L ++
Sbjct: 74 EEIEREVNILREI---RHPNIITLHDIF-------ENKTDVVLILELVSGGELFDFL--A 121
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAK 181
L+ + + +Q+L GV +LHS RI H DLKP+N+++ +K+ DFG+A
Sbjct: 122 EKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 181
Query: 182 TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL 241
+ ++ T + APEI+ G D+WSIG + + F T+ E L
Sbjct: 182 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 241
Query: 242 KCIFRVIGTPSMNEWPENISLMWSSF-EQYSKVAFSAIFMDCCSKANSLLESMLTFNPAD 300
NIS + F E+Y F + A + +L +P
Sbjct: 242 T----------------NISAVNYDFDEEY--------FSNTSELAKDFIRRLLVKDPKR 277
Query: 301 RISAADALEHPYFK 314
R+ A +LEH + K
Sbjct: 278 RMXIAQSLEHSWIK 291
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 50/307 (16%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMS 68
+ +D D+G +G G +G V+ AR+ QNK +A+K L + +L ++G+
Sbjct: 10 RKFTIDDFDIGRP-------LGKGKFGNVYLAREKQNK-FIMALKVLFKSQLEKEGVEHQ 61
Query: 69 TLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
REI I L HPNI+R ++ H +YL+ E + G ++
Sbjct: 62 LRREIEIQSHL---RHPNILRMYNYFHDRK-------RIYLMLEFAPR--GELYKELQKH 109
Query: 129 G-LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM 187
G + ++ + + H ++IHRD+KP+NLL+ G LKIADFG + +
Sbjct: 110 GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSL 168
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
+ TL Y PE++ + VD+W G + E +P F + + E + I
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-- 226
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
N+ L + F + L+ +L ++P R+
Sbjct: 227 -----------NVDLKFPPF--------------LSDGSKDLISKLLRYHPPQRLPLKGV 261
Query: 308 LEHPYFK 314
+EHP+ K
Sbjct: 262 MEHPWVK 268
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 50/307 (16%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMS 68
+ +D D+G +G G +G V+ AR+ QNK +A+K L + +L ++G+
Sbjct: 9 RKFTIDDFDIGRP-------LGKGKFGNVYLAREKQNK-FIMALKVLFKSQLEKEGVEHQ 60
Query: 69 TLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
REI I L HPNI+R ++ H +YL+ E + G ++
Sbjct: 61 LRREIEIQSHL---RHPNILRMYNYFHDRK-------RIYLMLEFAPR--GELYKELQKH 108
Query: 129 G-LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM 187
G + ++ + + H ++IHRD+KP+NLL+ G LKIADFG + +
Sbjct: 109 GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSL 167
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
+ TL Y PE++ + VD+W G + E +P F + + E + I
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-- 225
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
N+ L + F + L+ +L ++P R+
Sbjct: 226 -----------NVDLKFPPF--------------LSDGSKDLISKLLRYHPPQRLPLKGV 260
Query: 308 LEHPYFK 314
+EHP+ K
Sbjct: 261 MEHPWVK 267
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 45/300 (15%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILKQLD 80
Y+ ++G G + V K R Y A +KK R+ + G+ + RE++IL+++
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI- 65
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELT 139
HPNI+ D+ E V LI E V +L ++ L+ + +
Sbjct: 66 --RHPNIITLHDIF-------ENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFL 114
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L GV +LHS RI H DLKP+N+++ +K+ DFG+A + ++ T
Sbjct: 115 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 174
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
+ APEI+ G D+WSIG + + F T+ E L
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT------------- 221
Query: 256 WPENISLMWSSF-EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
NIS + F E+Y F + A + +L +P R++ A +LEH + K
Sbjct: 222 ---NISAVNYDFDEEY--------FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 49/259 (18%)
Query: 68 STLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYM-EKC 125
+TL+E+ IL+++ HPNI++ D N +L+F+ + + +L Y+ EK
Sbjct: 56 ATLKEVDILRKVSG--HPNIIQLKDTYETNTF-------FFLVFDLMKKGELFDYLTEKV 106
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
LS + +++ R +L+ + LH I+HRDLKP+N+L+ +K+ DFG + D
Sbjct: 107 T---LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 163
Query: 186 DMMLTSVVVTLWYRAPEILL------NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
L V T Y APEI+ + GYG VD+WS G +M + P F ++
Sbjct: 164 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 223
Query: 240 QLKCIFR---VIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTF 296
L+ I G+P +++ + + + S F L
Sbjct: 224 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRF--------------------------LVV 257
Query: 297 NPADRISAADALEHPYFKE 315
P R +A +AL HP+F++
Sbjct: 258 QPQKRYTAEEALAHPFFQQ 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 49/259 (18%)
Query: 68 STLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYM-EKC 125
+TL+E+ IL+++ HPNI++ D N +L+F+ + + +L Y+ EK
Sbjct: 69 ATLKEVDILRKVSG--HPNIIQLKDTYETNTF-------FFLVFDLMKKGELFDYLTEKV 119
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
LS + +++ R +L+ + LH I+HRDLKP+N+L+ +K+ DFG + D
Sbjct: 120 T---LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 186 DMMLTSVVVTLWYRAPEILL------NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
L V T Y APEI+ + GYG VD+WS G +M + P F ++
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 240 QLKCIFR---VIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTF 296
L+ I G+P +++ + + + S F L
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRF--------------------------LVV 270
Query: 297 NPADRISAADALEHPYFKE 315
P R +A +AL HP+F++
Sbjct: 271 QPQKRYTAEEALAHPFFQQ 289
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 122/292 (41%), Gaps = 41/292 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G G +G V+ AR+ QNK + +L ++G+ REI I L
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL---R 72
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKVKELTRQM 142
HPNI+R ++ H +YL+ E + G ++ G + ++
Sbjct: 73 HPNILRMYNYFHDRK-------RIYLMLEFAPR--GELYKELQKHGRFDEQRSATFMEEL 123
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
+ + H ++IHRD+KP+NLL+ G LKIADFG + + + TL Y PE
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE 182
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISL 262
++ + VD+W G + E +P F + + E + I N+ L
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-------------NVDL 229
Query: 263 MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+ F + L+ +L ++P R+ +EHP+ K
Sbjct: 230 KFPPF--------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 46/300 (15%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP-MSTLREISIL 76
D +K + +L +IG G++G V+ ARD++N VA+KK+ + ++E+ L
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRN-SEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 108
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
++L HPN +++ R T +L+ E+ +E P L ++
Sbjct: 109 QKL---RHPNTIQYRGCYL-------REHTAWLVMEYCLGSASDLLEVHKKP-LQEVEIA 157
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
+T L+G+ +LHSH +IHRD+K N+L++ G +K+ DFG A V T
Sbjct: 158 AVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXFVGTP 214
Query: 197 WYRAPEILLNLG---YGTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPS 252
++ APE++L + Y VD+WS+G E+ R PLF + + ++ + +
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF----NMNAMSALYHI----A 266
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
NE P S WS + + F+D C L P DR ++ L+H +
Sbjct: 267 QNESPALQSGHWSEYFRN--------FVDSC----------LQKIPQDRPTSEVLLKHRF 308
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 128/295 (43%), Gaps = 45/295 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILKQLDTFEHP 85
++G G + V K R Y A +KK R+ + G+ + RE++IL+++ HP
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI---RHP 75
Query: 86 NIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLK 144
NI+ D+ E V LI E V +L ++ L+ + + +Q+L
Sbjct: 76 NIITLHDIF-------ENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILD 126
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
GV +LHS RI H DLKP+N+++ +K+ DFG+A + ++ T + A
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
PEI+ G D+WSIG + + F T+ E L NI
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT----------------NI 230
Query: 261 SLMWSSF-EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
S + F E+Y F + A + +L +P R+ A +LEH + K
Sbjct: 231 SAVNYDFDEEY--------FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 121/241 (50%), Gaps = 22/241 (9%)
Query: 86 NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKG 145
NI++ D + D T L+FE+++ + + L+ ++ ++LK
Sbjct: 99 NIIKLIDTV-----KDPVSKTPALVFEYINNTDFKQLYQI----LTDFDIRFYMYELLKA 149
Query: 146 VDFLHSHRIIHRDLKPQNLLIT-RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEIL 204
+D+ HS I+HRD+KP N++I + L++ D+GLA+ + V + +++ PE+L
Sbjct: 150 LDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELL 209
Query: 205 LNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE---- 258
++ Y +D+WS+GC++A M +R P F +QL I +V+GT + + +
Sbjct: 210 VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHI 269
Query: 259 ------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N L S +++ S +A LL+ +L ++ R++A +A+EHPY
Sbjct: 270 DLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 329
Query: 313 F 313
F
Sbjct: 330 F 330
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 130/291 (44%), Gaps = 47/291 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V K + Q G+ VA+K L R K+ + REI LK F HP+I+
Sbjct: 19 LGVGTFGKV-KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK---LFRHPHII 74
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ + VI +++ E+V +L Y+ C + + + L +Q+L VD
Sbjct: 75 KLYQVISTPT-------DFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVD 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ H H ++HRDLKP+N+L+ KIADFGL+ L + + Y APE++
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 185
Query: 208 GYGTP-VDIWSIGCVMAEMWRLVPLFCAST--EVEQLKCIFRVIGTPSMNEWPENISLMW 264
Y P VDIWS G + L L C + + E + +F+ I + PE ++
Sbjct: 186 LYAGPEVDIWSCGVI------LYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPEYLN--- 235
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
+LL ML +P R + D EH +FK+
Sbjct: 236 -------------------RSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 121/241 (50%), Gaps = 22/241 (9%)
Query: 86 NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKG 145
NI++ D + D T L+FE+++ + + L+ ++ ++LK
Sbjct: 94 NIIKLIDTV-----KDPVSKTPALVFEYINNTDFKQLYQI----LTDFDIRFYMYELLKA 144
Query: 146 VDFLHSHRIIHRDLKPQNLLIT-RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEIL 204
+D+ HS I+HRD+KP N++I + L++ D+GLA+ + V + +++ PE+L
Sbjct: 145 LDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELL 204
Query: 205 LNLG-YGTPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE---- 258
++ Y +D+WS+GC++A M +R P F +QL I +V+GT + + +
Sbjct: 205 VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHI 264
Query: 259 ------NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
N L S +++ S +A LL+ +L ++ R++A +A+EHPY
Sbjct: 265 DLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
Query: 313 F 313
F
Sbjct: 325 F 325
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 46/300 (15%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP-MSTLREISIL 76
D +K + +L +IG G++G V+ ARD++N VA+KK+ + ++E+ L
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRN-SEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
++L HPN +++ R T +L+ E+ +E P L ++
Sbjct: 70 QKL---RHPNTIQYRGCY-------LREHTAWLVMEYCLGSASDLLEVHKKP-LQEVEIA 118
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
+T L+G+ +LHSH +IHRD+K N+L++ G +K+ DFG A V T
Sbjct: 119 AVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXFVGTP 175
Query: 197 WYRAPEILLNLG---YGTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPS 252
++ APE++L + Y VD+WS+G E+ R PLF + + ++ + +
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF----NMNAMSALYHI----A 227
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
NE P S WS + + F+D C L P DR ++ L+H +
Sbjct: 228 QNESPALQSGHWSEYFRN--------FVDSC----------LQKIPQDRPTSEVLLKHRF 269
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 49/304 (16%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAM----KKLRVKLNEDGIPMSTLREISILK 77
++Y ++G GA+ V + + Y AM KKL + ++ RE I +
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ-----KLEREARICR 65
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK-CPPPGLSASKVK 136
L +HPNIVR D I S+E + YLIF+ V G E S +
Sbjct: 66 LL---KHPNIVRLHDSI-----SEEGHH--YLIFDLVTG--GELFEDIVAREYYSEADAS 113
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLIT---RAGGLKIADFGLAKTFDYDMML-TSV 192
+Q+L+ V H ++HR+LKP+NLL+ + +K+ADFGLA + +
Sbjct: 114 HCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF 173
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T Y +PE+L YG PVD+W+ G ++ + ++G P
Sbjct: 174 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL---------------------LVGYPP 212
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
W E+ ++ + + S + +A L+ MLT NP+ RI+AA+AL+HP+
Sbjct: 213 F--WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270
Query: 313 FKEK 316
+
Sbjct: 271 ISHR 274
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 136/295 (46%), Gaps = 49/295 (16%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G GA V++ + + Y A+K L+ +++ + EI +L +L HPNI+
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPY-ALKVLKKTVDKKIVRT----EIGVLLRLS---HPNII 111
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL-SASKVKELTRQMLKGVD 147
+ ++ E + L+ E V G ++ G S + +Q+L+ V
Sbjct: 112 KLKEIF-------ETPTEISLVLELVTG--GELFDRIVEKGYYSERDAADAVKQILEAVA 162
Query: 148 FLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTFDYDMMLTSVVVTLWYRAPEIL 204
+LH + I+HRDLKP+NLL LKIADFGL+K ++ +++ +V T Y APEIL
Sbjct: 163 YLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEIL 222
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS---MNEWPENIS 261
YG VD+WS+G + + L+ F + + +FR I ++ W + +S
Sbjct: 223 RGCAYGPEVDMWSVGII---TYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS 279
Query: 262 LMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEK 316
L A L+ ++ +P R++ AL+HP+ K
Sbjct: 280 L----------------------NAKDLVRKLIVLDPKKRLTTFQALQHPWVTGK 312
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 129/296 (43%), Gaps = 49/296 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVA----MKKLRVKLNEDGIPMSTLREISILKQLDTFEHP 85
IG GA+ V + L Y A KKL + ++ RE I + L +H
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ-----KLEREARICRLL---KHS 63
Query: 86 NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK-CPPPGLSASKVKELTRQMLK 144
NIVR D I S+E + YL+F+ V G E S + +Q+L+
Sbjct: 64 NIVRLHDSI-----SEEGFH--YLVFDLVTG--GELFEDIVAREYYSEADASHCIQQILE 114
Query: 145 GVDFLHSHRIIHRDLKPQNLLIT---RAGGLKIADFGLAKTFDYDMML-TSVVVTLWYRA 200
V H ++HRDLKP+NLL+ + +K+ADFGLA D T Y +
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
PE+L YG PVDIW+ G ++ ++G P W E+
Sbjct: 175 PEVLRKEAYGKPVDIWACGVIL---------------------YILLVGYPPF--WDEDQ 211
Query: 261 SLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEK 316
++ + + S + +A +L+ MLT NPA RI+A +AL+HP+ ++
Sbjct: 212 HKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQR 267
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 144/305 (47%), Gaps = 48/305 (15%)
Query: 26 ELCQ-IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST---LREISILKQLDT 81
ELC+ IG GA+ V + + + G A+K + V +ST RE SI L
Sbjct: 27 ELCEVIGKGAFSVVRRCIN-RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-- 83
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGL--SASKVKEL 138
+HP+IV + + + +Y++FE +D DL + K G S +
Sbjct: 84 -KHPHIVELLETYSSDGM-------LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLIT---RAGGLKIADFGLA-KTFDYDMMLTSVVV 194
RQ+L+ + + H + IIHRD+KP+N+L+ + +K+ DFG+A + + ++ V
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVG 195
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWR-LVPLFCASTEVEQLKCIFRVIGTPSM 253
T + APE++ YG PVD+W G ++ + +P + T+ + I + G M
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIK--GKYKM 251
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
N Q+S ++ S A L+ ML +PA+RI+ +AL HP+
Sbjct: 252 NP------------RQWSHISES---------AKDLVRRMLMLDPAERITVYEALNHPWL 290
Query: 314 KEKEN 318
KE++
Sbjct: 291 KERDR 295
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 47/291 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G +G V K + Q G+ VA+K L R K+ + REI LK F HP+I+
Sbjct: 19 LGVGTFGKV-KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK---LFRHPHII 74
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ + VI +++ E+V +L Y+ C + + + L +Q+L VD
Sbjct: 75 KLYQVISTPT-------DFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVD 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ H H ++HRDLKP+N+L+ KIADFGL+ L + Y APE++
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGR 185
Query: 208 GYGTP-VDIWSIGCVMAEMWRLVPLFCAST--EVEQLKCIFRVIGTPSMNEWPENISLMW 264
Y P VDIWS G + L L C + + E + +F+ I + PE ++
Sbjct: 186 LYAGPEVDIWSCGVI------LYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPEYLN--- 235
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
+LL ML +P R + D EH +FK+
Sbjct: 236 -------------------RSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 49/297 (16%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVA----MKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
++G GA+ V + + Y A KKL + ++ RE I + L +H
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ-----KLEREARICRLL---KH 80
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK-CPPPGLSASKVKELTRQML 143
PNIVR D I S+E + YLIF+ V G E S + +Q+L
Sbjct: 81 PNIVRLHDSI-----SEEGHH--YLIFDLVTG--GELFEDIVAREYYSEADASHCIQQIL 131
Query: 144 KGVDFLHSHRIIHRDLKPQNLLIT---RAGGLKIADFGLAKTFDYDMML-TSVVVTLWYR 199
+ V H ++HRDLKP+NLL+ + +K+ADFGLA + + T Y
Sbjct: 132 EAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYL 191
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
+PE+L YG PVD+W+ G ++ + ++G P W E+
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYIL---------------------LVGYPPF--WDED 228
Query: 260 ISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEK 316
++ + + S + +A L+ MLT NP+ RI+AA+AL+HP+ +
Sbjct: 229 QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 285
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTF 82
Y L IG G + V AR + G VA+K + + +LN + RE+ I+K L+
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSL-QKLFREVRIMKILN-- 69
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKVKELTRQ 141
HPNIV+ F+VI E T+YLI E+ G + G + + + RQ
Sbjct: 70 -HPNIVKLFEVI-------ETEKTLYLIMEYASG--GEVFDYLVAHGRMKEKEARSKFRQ 119
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
++ V + H RI+HRDLK +NLL+ +KIADFG + F L + + Y AP
Sbjct: 120 IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAP 179
Query: 202 EILLNLGYGTP-VDIWSIGCVM 222
E+ Y P VD+WS+G ++
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVIL 201
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTF 82
Y L IG G + V AR + G VA+K + + +LN + RE+ I+K L+
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSL-QKLFREVRIMKILN-- 72
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKVKELTRQ 141
HPNIV+ F+VI E T+YLI E+ G + G + + + RQ
Sbjct: 73 -HPNIVKLFEVI-------ETEKTLYLIMEYASG--GEVFDYLVAHGRMKEKEARSKFRQ 122
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
++ V + H RI+HRDLK +NLL+ +KIADFG + F L + Y AP
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAP 182
Query: 202 EILLNLGYGTP-VDIWSIGCVM 222
E+ Y P VD+WS+G ++
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVIL 204
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISIL 76
DL Y L IG G + V AR + G VA+K + + +LN + RE+ I+
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSL-QKLFREVRIM 60
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKV 135
K L+ HPNIV+ F+VI E T+YL+ E+ G + G + +
Sbjct: 61 KVLN---HPNIVKLFEVI-------ETEKTLYLVMEYASG--GEVFDYLVAHGWMKEKEA 108
Query: 136 KELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVT 195
+ RQ++ V + H I+HRDLK +NLL+ +KIADFG + F + L + +
Sbjct: 109 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS 168
Query: 196 LWYRAPEILLNLGYGTP-VDIWSIGCVM 222
Y APE+ Y P VD+WS+G ++
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVIL 196
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 110/210 (52%), Gaps = 18/210 (8%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRV-KLNEDGIPMSTLREISILKQLDTFEHPNI 87
+IG G + V++A L + G VA+KK+++ L + ++EI +LKQL+ HPN+
Sbjct: 39 KIGRGQFSEVYRAACLLD-GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN---HPNV 94
Query: 88 VRFF-DVIHQNILSDERYLTVYLIFEHVDQ-DLGSYME--KCPPPGLSASKVKELTRQML 143
++++ I N L+ ++ E D DL ++ K + V + Q+
Sbjct: 95 IKYYASFIEDNELN--------IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT-SVVVTLWYRAPE 202
++ +HS R++HRD+KP N+ IT G +K+ D GL + F S+V T +Y +PE
Sbjct: 147 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLF 232
+ GY DIWS+GC++ EM L F
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 150/342 (43%), Gaps = 67/342 (19%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR------------VKL-----NED 63
D +Y + ++G G + TV+ A+D+ N +VAMK +R +KL + D
Sbjct: 18 DARYILVRKLGWGHFSTVWLAKDMVNN-THVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 64 GIPMSTLREISILKQLDTFEH--PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY 121
++ ILK LD F H PN V V ++FE + ++L +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVH-----------------VVMVFEVLGENLLAL 119
Query: 122 MEKCPPPGLSASKVKELTRQMLKGVDFLHSH-RIIHRDLKPQNLLITRAGG------LKI 174
++K G+ VK++++Q+L G+D++H IIH D+KP+N+L+ +KI
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKI 179
Query: 175 ADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLF-- 232
AD G A YD T+ + T YR+PE+LL +G DIWS C++ E+ LF
Sbjct: 180 ADLGNACW--YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237
Query: 233 ----CASTEVEQLKCIFRVIGT-PSM----NEWPENISLMWSSFEQYSKVAFSAI----- 278
+ + + + I ++G PS ++ SK+ F +
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT 297
Query: 279 -----FMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
D + + L ML +P R A + HP+ K+
Sbjct: 298 EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 21 DKKYDELCQIGCGAYGTVFKARD--LQNKGNYVAMKKLRVKLNEDGIPMSTL-REISILK 77
+++Y + ++G G TV+ A D L K VA+K + + E + RE+
Sbjct: 10 NERYKIVDKLGGGGMSTVYLAEDTILNIK---VAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVK 136
QL H NIV DV DE YL+ E+++ L Y+E P LS
Sbjct: 67 QL---SHQNIVSMIDV-------DEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAI 114
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTS--VVV 194
T Q+L G+ H RI+HRD+KPQN+LI LKI DFG+AK + + V+
Sbjct: 115 NFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG 174
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
T+ Y +PE DI+SIG V+ EM P F T V
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 150/342 (43%), Gaps = 67/342 (19%)
Query: 21 DKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR------------VKL-----NED 63
D +Y + ++G G + TV+ A+D+ N +VAMK +R +KL + D
Sbjct: 18 DARYILVRKLGWGHFSTVWLAKDMVNN-THVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 64 GIPMSTLREISILKQLDTFEH--PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY 121
++ ILK LD F H PN V V ++FE + ++L +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVH-----------------VVMVFEVLGENLLAL 119
Query: 122 MEKCPPPGLSASKVKELTRQMLKGVDFLHSH-RIIHRDLKPQNLLITRAGG------LKI 174
++K G+ VK++++Q+L G+D++H IIH D+KP+N+L+ +KI
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKI 179
Query: 175 ADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLF-- 232
AD G A YD T+ + T YR+PE+LL +G DIWS C++ E+ LF
Sbjct: 180 ADLGNACW--YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237
Query: 233 ----CASTEVEQLKCIFRVIGT-PSM----NEWPENISLMWSSFEQYSKVAFSAI----- 278
+ + + + I ++G PS ++ SK+ F +
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT 297
Query: 279 -----FMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
D + + L ML +P R A + HP+ K+
Sbjct: 298 EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 137/307 (44%), Gaps = 55/307 (17%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
APE+L + PVD+WS G V+ M +Q PS
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM------LAGELPWDQ----------PS------ 211
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANS----LLESMLTFNPADRISAADALEHPYFK 314
S ++YS +++ K +S LL +L NP+ RI+ D + ++
Sbjct: 212 ------DSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY- 264
Query: 315 EKENEPL 321
N+PL
Sbjct: 265 ---NKPL 268
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 64 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTF 82
Y L IG G + V AR + G VA+K + + +LN + RE+ I+K L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLN-- 71
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKVKELTRQ 141
HPNIV+ F+VI E T+YL+ E+ G + G + + + RQ
Sbjct: 72 -HPNIVKLFEVI-------ETEKTLYLVMEYASG--GEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
++ V + H I+HRDLK +NLL+ +KIADFG + F + L + + Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 202 EILLNLGYGTP-VDIWSIGCVM 222
E+ Y P VD+WS+G ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVIL 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEIXINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 64 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEIXINKMLN--- 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 64 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 61
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 62 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 112
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 113 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAM 199
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEIXINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTF 82
Y L IG G + V AR + G VA+K + + +LN + RE+ I+K L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLN-- 71
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKVKELTRQ 141
HPNIV+ F+VI E T+YL+ E+ G + G + + + RQ
Sbjct: 72 -HPNIVKLFEVI-------ETEKTLYLVMEYASG--GEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
++ V + H I+HRDLK +NLL+ +KIADFG + F + L + + Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 202 EILLNLGYGTP-VDIWSIGCVM 222
E+ Y P VD+WS+G ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVIL 203
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 111/217 (51%), Gaps = 13/217 (5%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT 81
+KY L +IG G++G + ++ YV +K++ + + RE+++L +
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYV-IKEINISRMSSKEREESRREVAVLANM-- 80
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTR 140
+HPNIV++ + +N ++Y++ ++ + DL + ++ +
Sbjct: 81 -KHPNIVQYRESFEEN-------GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV-TLWYR 199
Q+ + +H +I+HRD+K QN+ +T+ G +++ DFG+A+ + + L + T +Y
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYL 192
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCAST 236
+PEI N Y DIW++GCV+ E+ L F A +
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 64 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 64 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 64 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 64 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ +L +IG G++G VFK D N+ V K+ + +EI++L Q D+
Sbjct: 25 FTKLERIGKGSFGEVFKGID--NRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-- 80
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
+ + + L + +++I E++ GS ++ ++ + +++L
Sbjct: 81 -----SYVTKYYGSYLKGSK---LWIIMEYLGG--GSALDLLRAGPFDEFQIATMLKEIL 130
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLTSVVVTLWYRAPE 202
KG+D+LHS + IHRD+K N+L++ G +K+ADFG+A D + + V T ++ APE
Sbjct: 131 KGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 190
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISL 262
++ Y + DIWS+G E+ + P ++++ ++ +F + N P +
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEP---PNSDMHPMRVLFLI----PKNNPPTLVGD 243
Query: 263 MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
SF++ F+D C L +P+ R +A + L+H +
Sbjct: 244 FTKSFKE---------FIDAC----------LNKDPSFRPTAKELLKHKF 274
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 129/297 (43%), Gaps = 47/297 (15%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
YD +G GA+ V A D + + VA+K + K E G S EI++L ++ +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQ-KLVAIKCIAKKALE-GKEGSMENEIAVLHKI---K 74
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK-VKELTRQM 142
HPNIV D+ E +YLI + V G ++ G + L Q+
Sbjct: 75 HPNIVALDDIY-------ESGGHLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIFQV 125
Query: 143 LKGVDFLHSHRIIHRDLKPQNLL---ITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYR 199
L V +LH I+HRDLKP+NLL + + I+DFGL+K D +L++ T Y
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYV 185
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
APE+L Y VD WSIG + L C G P + EN
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIA------YILLC---------------GYPPF--YDEN 222
Query: 260 ISLMWSSFEQYSKVAF---SAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+ + FEQ K + S + D A + ++ +P R + AL+HP+
Sbjct: 223 DAKL---FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTF 82
Y L IG G + V AR + G VA+K + + +LN + RE+ I+K L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLN-- 71
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKVKELTRQ 141
HPNIV+ F+VI E T+YL+ E+ G + G + + + RQ
Sbjct: 72 -HPNIVKLFEVI-------ETEKTLYLVMEYASG--GEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
++ V + H I+HRDLK +NLL+ +KIADFG + F + L + Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 202 EILLNLGYGTP-VDIWSIGCVM 222
E+ Y P VD+WS+G ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVIL 203
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTF 82
Y L IG G + V AR + G VA++ + + +LN + RE+ I+K L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSL-QKLFREVRIMKVLN-- 71
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKVKELTRQ 141
HPNIV+ F+VI E T+YL+ E+ G + G + + + RQ
Sbjct: 72 -HPNIVKLFEVI-------ETEKTLYLVMEYASG--GEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
++ V + H I+HRDLK +NLL+ +KIADFG + F + L + + Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 202 EILLNLGYGTP-VDIWSIGCVM 222
E+ Y P VD+WS+G ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 47/303 (15%)
Query: 27 LCQIGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
+ ++G GA+G V+KA QNK V A K + K E+ + EI IL D H
Sbjct: 42 IGELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCD---H 93
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNIV+ D + E L + + F + + M + P L+ S+++ + +Q L
Sbjct: 94 PNIVKLLDAFYY-----ENNLWILIEF-CAGGAVDAVMLELERP-LTESQIQVVCKQTLD 146
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL-AKTFDYDMMLTSVVVTLWYRAPEI 203
+++LH ++IIHRDLK N+L T G +K+ADFG+ AK S + T ++ APE+
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 206
Query: 204 LL-----NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
++ + Y D+WS+G + EM + P E+ ++ + ++ + +E P
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKI----AKSEPP- 258
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKEN 318
+ Q S+ +S+ F D L+ L N R + + L+HP+ N
Sbjct: 259 -------TLAQPSR--WSSNFKD-------FLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
Query: 319 EPL 321
+P+
Sbjct: 303 KPI 305
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 47/303 (15%)
Query: 27 LCQIGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
+ ++G GA+G V+KA QNK V A K + K E+ + EI IL D H
Sbjct: 42 IGELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCD---H 93
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNIV+ D + E L + + F + + M + P L+ S+++ + +Q L
Sbjct: 94 PNIVKLLDAFYY-----ENNLWILIEF-CAGGAVDAVMLELERP-LTESQIQVVCKQTLD 146
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL-AKTFDYDMMLTSVVVTLWYRAPEI 203
+++LH ++IIHRDLK N+L T G +K+ADFG+ AK S + T ++ APE+
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEV 206
Query: 204 LL-----NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
++ + Y D+WS+G + EM + P E+ ++ + ++ + +E P
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKI----AKSEPP- 258
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKEN 318
+ Q S+ +S+ F D L+ L N R + + L+HP+ N
Sbjct: 259 -------TLAQPSR--WSSNFKD-------FLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
Query: 319 EPL 321
+P+
Sbjct: 303 KPI 305
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 140/306 (45%), Gaps = 53/306 (17%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G +G VF+A++ + NY A+K++R+ N + +RE+ L +L EHP IVR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNY-AIKRIRLP-NRELAREKVMREVKALAKL---EHPGIVR 67
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVD------QDLGSYME-KCPPPGLSASKVKELTRQM 142
+F+ + +++ + ++ ++ ++L +M +C S + Q+
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-------------MML 189
+ V+FLHS ++HRDLKP N+ T +K+ DFGL D D
Sbjct: 128 AEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 190 TSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIG 249
T V T Y +PE + Y VDI+S+G ++ E+ L+ ST++E+++ + V
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRTLTDV-- 240
Query: 250 TPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALE 309
+ F +F +++ ML+ +P +R A + +E
Sbjct: 241 ---------------------RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279
Query: 310 HPYFKE 315
+ F++
Sbjct: 280 NAVFED 285
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 129/297 (43%), Gaps = 47/297 (15%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
YD +G GA+ V A D + + VA+K + K +G S EI++L ++ +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQ-KLVAIKCI-AKEALEGKEGSMENEIAVLHKI---K 74
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK-VKELTRQM 142
HPNIV D+ E +YLI + V G ++ G + L Q+
Sbjct: 75 HPNIVALDDIY-------ESGGHLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIFQV 125
Query: 143 LKGVDFLHSHRIIHRDLKPQNLL---ITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYR 199
L V +LH I+HRDLKP+NLL + + I+DFGL+K D +L++ T Y
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYV 185
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
APE+L Y VD WSIG + L C G P + EN
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIA------YILLC---------------GYPPF--YDEN 222
Query: 260 ISLMWSSFEQYSKVAF---SAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+ + FEQ K + S + D A + ++ +P R + AL+HP+
Sbjct: 223 DAKL---FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTF 82
Y L IG G + V AR + G VA+K + + +LN + RE+ I K L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSL-QKLFREVRIXKVLN-- 71
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK-VKELTRQ 141
HPNIV+ F+VI E T+YL+ E+ G + G K + RQ
Sbjct: 72 -HPNIVKLFEVI-------ETEKTLYLVXEYASG--GEVFDYLVAHGRXKEKEARAKFRQ 121
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
++ V + H I+HRDLK +NLL+ +KIADFG + F + L + Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 202 EILLNLGYGTP-VDIWSIGCVM 222
E+ Y P VD+WS+G ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVIL 203
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 129/296 (43%), Gaps = 47/296 (15%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
YD +G GA+ V A D + + VA+K + K +G S EI++L ++ +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQ-KLVAIKCI-AKEALEGKEGSMENEIAVLHKI---K 74
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK-VKELTRQM 142
HPNIV D+ E +YLI + V G ++ G + L Q+
Sbjct: 75 HPNIVALDDIY-------ESGGHLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIFQV 125
Query: 143 LKGVDFLHSHRIIHRDLKPQNLL---ITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYR 199
L V +LH I+HRDLKP+NLL + + I+DFGL+K D +L++ T Y
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYV 185
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
APE+L Y VD WSIG + L C G P + EN
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIA------YILLC---------------GYPPF--YDEN 222
Query: 260 ISLMWSSFEQYSKVAF---SAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
+ + FEQ K + S + D A + ++ +P R + AL+HP+
Sbjct: 223 DAKL---FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 43/297 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILKQLD 80
YD ++G G + V K R+ Y A +KK + + + G+ + RE+SIL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV- 72
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELT 139
HPNI+ DV E V LI E V +L ++ LS +
Sbjct: 73 --LHPNIITLHDVY-------ENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L GV++LH+ +I H DLKP+N+++ +K+ DFGLA + + ++ T
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
+ APEI+ G D+WSIG + + F T+ E L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------- 228
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
NI+ + F++ F A + +L R++ +AL HP+
Sbjct: 229 ---NITAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 129/296 (43%), Gaps = 47/296 (15%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
YD +G GA+ V A D + + VA+K + K +G S EI++L ++ +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQ-KLVAIKCI-AKEALEGKEGSMENEIAVLHKI---K 74
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK-VKELTRQM 142
HPNIV D+ E +YLI + V G ++ G + L Q+
Sbjct: 75 HPNIVALDDIY-------ESGGHLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIFQV 125
Query: 143 LKGVDFLHSHRIIHRDLKPQNLL---ITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYR 199
L V +LH I+HRDLKP+NLL + + I+DFGL+K D +L++ T Y
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYV 185
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
APE+L Y VD WSIG + L C G P + EN
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIA------YILLC---------------GYPPF--YDEN 222
Query: 260 ISLMWSSFEQYSKVAF---SAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
+ + FEQ K + S + D A + ++ +P R + AL+HP+
Sbjct: 223 DAKL---FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTF 82
Y L IG G + V AR + G VA++ + + +LN + RE+ I+K L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSL-QKLFREVRIMKVLN-- 71
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKVKELTRQ 141
HPNIV+ F+VI E T+YL+ E+ G + G + + + RQ
Sbjct: 72 -HPNIVKLFEVI-------ETEKTLYLVMEYASG--GEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
++ V + H I+HRDLK +NLL+ +KIADFG + F + L + Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAP 181
Query: 202 EILLNLGYGTP-VDIWSIGCVM 222
E+ Y P VD+WS+G ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 40/251 (15%)
Query: 71 REISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL 130
+EI +L++L H N+++ DV++ +E +Y++ E+ + ++ P
Sbjct: 55 KEIQLLRRL---RHKNVIQLVDVLY-----NEEKQKMYMVMEYCVCGMQEMLDSVPEKRF 106
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT---FDYDM 187
+ Q++ G+++LHS I+H+D+KP NLL+T G LKI+ G+A+ F D
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 188 MLTSVVVTLWYRAPEIL--LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIF 245
+ + ++ PEI L+ G VDIWS G V L+ +T +
Sbjct: 167 TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAG---------VTLYNITTGL------- 210
Query: 246 RVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAA 305
+P ++ FE K ++ AI DC + LL+ ML + PA R S
Sbjct: 211 ----------YPFEGDNIYKLFENIGKGSY-AIPGDCGPPLSDLLKGMLEYEPAKRFSIR 259
Query: 306 DALEHPYFKEK 316
+H +F++K
Sbjct: 260 QIRQHSWFRKK 270
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GAYG V A + + VA+K + +K D P + +EI I L+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINAMLN--- 63
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 64 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 149/340 (43%), Gaps = 75/340 (22%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK--QLDTFEHPN 86
++G G +G V + + NK Y A+K +R N S E ILK Q D + N
Sbjct: 42 KMGDGTFGRVLLCQHIDNK-KYYAVKVVR---NIKKYTRSAKIEADILKKIQNDDINNNN 97
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
IV++ H + Y + LIFE + L + + G +K ++LK +
Sbjct: 98 IVKY----HGKFMY---YDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKAL 150
Query: 147 DFLHSHRIIHRDLKPQNLLI-------------------------TRAGGLKIADFGLAK 181
++L + H DLKP+N+L+ T++ G+K+ DFG A
Sbjct: 151 NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA- 209
Query: 182 TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL 241
TF D S++ T YRAPE++LNLG+ D+WS GCV+AE++ LF +E L
Sbjct: 210 TFKSDYH-GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268
Query: 242 KCIFRVI---------------GTPSMNE------WPENISLMWSSFEQYS------KVA 274
+ +I G+ +N+ WPEN S + +S + K+
Sbjct: 269 AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSI-NSIKHVKKCLPLYKII 327
Query: 275 FSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+F D L S+L +P R S A+ L+H + +
Sbjct: 328 KHELFCD-------FLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 72
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L ++ E+ + K+ + T Q+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-----IDHIKLLQYTSQIC 127
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 188 -APESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 58/303 (19%)
Query: 31 GCGAYGTVFKARDLQNKG-NYVAMKKLRVKLNEDGIP-MSTLREISILKQLDTFEHPNIV 88
CG F+ + + ++ +K + + P ++ EI ILK+L+ HP I+
Sbjct: 22 ACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCII 78
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT-----RQML 143
+ +N E Y Y++ E ++ G +K + ++KE T QML
Sbjct: 79 KI-----KNFFDAEDY---YIVLELMEG--GELFDKV----VGNKRLKEATCKLYFYQML 124
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
V +LH + IIHRDLKP+N+L++ +KI DFG +K ++ ++ T Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 201 PEILLNL---GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
PE+L+++ GY VD WS+G ++ C S G P +E
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVIL--------FICLS-------------GYPPFSEHR 223
Query: 258 ENISLMWSSFEQYSKVAFS---AIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+SL +Q + ++ ++ + KA L++ +L +P R + +AL HP+ +
Sbjct: 224 TQVSLK----DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
Query: 315 EKE 317
+++
Sbjct: 280 DED 282
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 58/303 (19%)
Query: 31 GCGAYGTVFKARDLQNKG-NYVAMKKLRVKLNEDGIP-MSTLREISILKQLDTFEHPNIV 88
CG F+ + + ++ +K + + P ++ EI ILK+L+ HP I+
Sbjct: 22 ACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCII 78
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT-----RQML 143
+ +N E Y Y++ E ++ G +K + ++KE T QML
Sbjct: 79 KI-----KNFFDAEDY---YIVLELMEG--GELFDKV----VGNKRLKEATCKLYFYQML 124
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
V +LH + IIHRDLKP+N+L++ +KI DFG +K ++ ++ T Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 201 PEILLNL---GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
PE+L+++ GY VD WS+G ++ C S G P +E
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVIL--------FICLS-------------GYPPFSEHR 223
Query: 258 ENISLMWSSFEQYSKVAFS---AIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+SL +Q + ++ ++ + KA L++ +L +P R + +AL HP+ +
Sbjct: 224 TQVSLK----DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
Query: 315 EKE 317
+++
Sbjct: 280 DED 282
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 58/303 (19%)
Query: 31 GCGAYGTVFKARDLQNKG-NYVAMKKLRVKLNEDGIP-MSTLREISILKQLDTFEHPNIV 88
CG F+ + + ++ +K + + P ++ EI ILK+L+ HP I+
Sbjct: 22 ACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCII 78
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT-----RQML 143
+ +N E Y Y++ E ++ G +K + ++KE T QML
Sbjct: 79 KI-----KNFFDAEDY---YIVLELMEG--GELFDKV----VGNKRLKEATCKLYFYQML 124
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
V +LH + IIHRDLKP+N+L++ +KI DFG +K ++ ++ T Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 201 PEILLNL---GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
PE+L+++ GY VD WS+G ++ C S G P +E
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVIL--------FICLS-------------GYPPFSEHR 223
Query: 258 ENISLMWSSFEQYSKVAFS---AIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+SL +Q + ++ ++ + KA L++ +L +P R + +AL HP+ +
Sbjct: 224 TQVSLK----DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
Query: 315 EKE 317
+++
Sbjct: 280 DED 282
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 61/307 (19%)
Query: 30 IGCGAYGTV---FKARDLQNKG-NYVAMKKLRVKLNEDGIP-MSTLREISILKQLDTFEH 84
+G GA G V F+ + + ++ +K + + P ++ EI ILK+L+ H
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---H 73
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT----- 139
P I++ +N E Y Y++ E ++ G +K + ++KE T
Sbjct: 74 PCIIKI-----KNFFDAEDY---YIVLELMEG--GELFDKV----VGNKRLKEATCKLYF 119
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTFDYDMMLTSVVVTL 196
QML V +LH + IIHRDLKP+N+L++ +KI DFG +K ++ ++ T
Sbjct: 120 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 179
Query: 197 WYRAPEILLNL---GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
Y APE+L+++ GY VD WS+G ++ C S G P
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVIL--------FICLS-------------GYPPF 218
Query: 254 NEWPENISLMWSSFEQYSKVAFS---AIFMDCCSKANSLLESMLTFNPADRISAADALEH 310
+E +SL +Q + ++ ++ + KA L++ +L +P R + +AL H
Sbjct: 219 SEHRTQVSLK----DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 274
Query: 311 PYFKEKE 317
P+ ++++
Sbjct: 275 PWLQDED 281
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 144/303 (47%), Gaps = 47/303 (15%)
Query: 27 LCQIGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
+ ++G GA+G V+KA QNK V A K + K E+ + EI IL D H
Sbjct: 42 IGELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCD---H 93
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLK 144
PNIV+ D + E L + + F + + M + P L+ S+++ + +Q L
Sbjct: 94 PNIVKLLDAFYY-----ENNLWILIEF-CAGGAVDAVMLELERP-LTESQIQVVCKQTLD 146
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL-AKTFDYDMMLTSVVVTLWYRAPEI 203
+++LH ++IIHRDLK N+L T G +K+ADFG+ AK + T ++ APE+
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEV 206
Query: 204 LL-----NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
++ + Y D+WS+G + EM + P E+ ++ + ++ + +E P
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKI----AKSEPP- 258
Query: 259 NISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKEN 318
+ Q S+ +S+ F D L+ L N R + + L+HP+ N
Sbjct: 259 -------TLAQPSR--WSSNFKD-------FLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
Query: 319 EPL 321
+P+
Sbjct: 303 KPI 305
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 61/307 (19%)
Query: 30 IGCGAYGTV---FKARDLQNKG-NYVAMKKLRVKLNEDGIP-MSTLREISILKQLDTFEH 84
+G GA G V F+ + + ++ +K + + P ++ EI ILK+L+ H
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---H 80
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT----- 139
P I++ +N E Y Y++ E ++ G +K + ++KE T
Sbjct: 81 PCIIKI-----KNFFDAEDY---YIVLELMEG--GELFDKV----VGNKRLKEATCKLYF 126
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTFDYDMMLTSVVVTL 196
QML V +LH + IIHRDLKP+N+L++ +KI DFG +K ++ ++ T
Sbjct: 127 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 186
Query: 197 WYRAPEILLNL---GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
Y APE+L+++ GY VD WS+G ++ C S G P
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVIL--------FICLS-------------GYPPF 225
Query: 254 NEWPENISLMWSSFEQYSKVAFS---AIFMDCCSKANSLLESMLTFNPADRISAADALEH 310
+E +SL +Q + ++ ++ + KA L++ +L +P R + +AL H
Sbjct: 226 SEHRTQVSLK----DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 281
Query: 311 PYFKEKE 317
P+ ++++
Sbjct: 282 PWLQDED 288
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 44/287 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++G V A + + VA+K + R L + + M REIS LK L HP+I+
Sbjct: 17 LGEGSFGKVKLATHYKTQQK-VALKFISRQLLKKSDMHMRVEREISYLKLL---RHPHII 72
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDF 148
+ +DVI + ++ E+ +L Y+ ++ + + +Q++ +++
Sbjct: 73 KLYDVITTPT-------DIVMVIEYAGGELFDYI--VEKKRMTEDEGRRFFQQIICAIEY 123
Query: 149 LHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNLG 208
H H+I+HRDLKP+NLL+ +KIADFGL+ L + + Y APE++
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL 183
Query: 209 YGTP-VDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
Y P VD+WS G V+ M V P +E+ N+ F
Sbjct: 184 YAGPEVDVWSCGIVLYVML--------------------VGRLPFDDEFIPNL------F 217
Query: 268 EQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYF 313
++ + + + D S A SL+ M+ +P RI+ + P+F
Sbjct: 218 KKVNSCVY--VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 136/308 (44%), Gaps = 62/308 (20%)
Query: 24 YDELCQIGCGAYGTVFKARDLQ--NKGNYVAMKKLR----VKLNEDGIPMSTLREISILK 77
++ L +G G YG VF+ R + N G AMK L+ V+ +D R I
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI---- 74
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTV-YL----IFEHVDQDLGSYMEKCPPPGLSA 132
L+ +HP IV D+I+ + YL + YL +F ++++ G +ME L+
Sbjct: 75 -LEEVKHPFIV---DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLA- 128
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV 192
++ + LH II+RDLKP+N+++ G +K+ DFGL K +D +T
Sbjct: 129 --------EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT 180
Query: 193 VV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
T+ Y APEIL+ G+ VD WS+G +M +M P F + + I +
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC---- 236
Query: 252 SMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISA--ADALE 309
+N P +A LL+ +L N A R+ A DA E
Sbjct: 237 KLNLPPY-----------------------LTQEARDLLKKLLKRNAASRLGAGPGDAGE 273
Query: 310 ---HPYFK 314
HP+F+
Sbjct: 274 VQAHPFFR 281
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 100
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 155
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 216 -APESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 58/303 (19%)
Query: 31 GCGAYGTVFKARDLQNKG-NYVAMKKLRVKLNEDGIP-MSTLREISILKQLDTFEHPNIV 88
CG F+ + + ++ +K + + P ++ EI ILK+L+ HP I+
Sbjct: 161 ACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCII 217
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT-----RQML 143
+ +N E Y Y++ E ++ G +K + ++KE T QML
Sbjct: 218 KI-----KNFFDAEDY---YIVLELMEG--GELFDKV----VGNKRLKEATCKLYFYQML 263
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
V +LH + IIHRDLKP+N+L++ +KI DFG +K ++ ++ T Y A
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 323
Query: 201 PEILLNL---GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
PE+L+++ GY VD WS+G ++ C S G P +E
Sbjct: 324 PEVLVSVGTAGYNRAVDCWSLGVIL--------FICLS-------------GYPPFSEHR 362
Query: 258 ENISLMWSSFEQYSKVAFS---AIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+SL +Q + ++ ++ + KA L++ +L +P R + +AL HP+ +
Sbjct: 363 TQVSLK----DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
Query: 315 EKE 317
+++
Sbjct: 419 DED 421
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+D + +G GA G V A + + VA+K + +K D P + +EI I K L+
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTE-EAVAVKIVDMKRAVD-CPENIKKEICINKMLN--- 62
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP-GLSASKVKELTRQM 142
H N+V+F+ + + YL E+ G ++ P G+ + Q+
Sbjct: 63 HENVVKFYGHRREGNIQ-------YLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY---DMMLTSVVVTLWYR 199
+ GV +LH I HRD+KP+NLL+ LKI+DFGLA F Y + +L + TL Y
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 200 APEILLNLGY-GTPVDIWSIGCVMAEM 225
APE+L + PVD+WS G V+ M
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 58/303 (19%)
Query: 31 GCGAYGTVFKARDLQNKG-NYVAMKKLRVKLNEDGIP-MSTLREISILKQLDTFEHPNIV 88
CG F+ + + ++ +K + + P ++ EI ILK+L+ HP I+
Sbjct: 147 ACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCII 203
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT-----RQML 143
+ +N E Y Y++ E ++ G +K + ++KE T QML
Sbjct: 204 KI-----KNFFDAEDY---YIVLELMEG--GELFDKV----VGNKRLKEATCKLYFYQML 249
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
V +LH + IIHRDLKP+N+L++ +KI DFG +K ++ ++ T Y A
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309
Query: 201 PEILLNL---GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
PE+L+++ GY VD WS+G ++ C S G P +E
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVIL--------FICLS-------------GYPPFSEHR 348
Query: 258 ENISLMWSSFEQYSKVAFS---AIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+SL +Q + ++ ++ + KA L++ +L +P R + +AL HP+ +
Sbjct: 349 TQVSLK----DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
Query: 315 EKE 317
+++
Sbjct: 405 DED 407
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILKQLD 80
YD ++G G + V K R+ Y A +KK + + + G+ + RE+SIL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV- 72
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELT 139
H N++ DV E V LI E V +L ++ LS +
Sbjct: 73 --LHHNVITLHDVY-------ENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L GV++LH+ +I H DLKP+N+++ +K+ DFGLA + + ++ T
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
+ APEI+ G D+WSIG + + F T+ E L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------- 228
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
NI+ + F++ F A + +L R++ +AL HP+
Sbjct: 229 ---NITAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 316 KENE 319
+N+
Sbjct: 279 VDNQ 282
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 75
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 130
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 191 -APESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILKQLD 80
YD ++G G + V K R+ Y A +KK + + + G+ + RE+SIL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV- 72
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELT 139
H N++ DV E V LI E V +L ++ LS +
Sbjct: 73 --LHHNVITLHDVY-------ENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L GV++LH+ +I H DLKP+N+++ +K+ DFGLA + + ++ T
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
+ APEI+ G D+WSIG + + F T+ E L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------- 228
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
NI+ + F++ F A + +L R++ +AL HP+
Sbjct: 229 ---NITAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 316 KENE 319
+N+
Sbjct: 279 VDNQ 282
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 76
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 131
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 192 -APESLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 73
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 128
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 189 -APESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 72
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 127
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 188 -APESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 69
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 124
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 185 -APESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 74
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 129
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 190 -APESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 68
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 123
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 184 -APESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 67
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 122
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 183 -APESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 69
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 124
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 185 -APESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 141/300 (47%), Gaps = 42/300 (14%)
Query: 17 LDLGDKK--YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+D GD + D +IG G+ G V A +++ G VA+KK+ ++ + + E+
Sbjct: 144 VDPGDPRSYLDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELL--FNEVV 200
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
I++ ++H N+V ++ ++ DE ++ + + D+ ++ ++ +
Sbjct: 201 IMRD---YQHENVVEMYN---SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQ 248
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + +L+ + LH+ +IHRD+K ++L+T G +K++DFG ++ +V
Sbjct: 249 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 308
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ L YG VDIWS+G ++ EM P + ++ +K I
Sbjct: 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-------- 360
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+N+ + + S L+ +L +PA R +AA+ L+HP+
Sbjct: 361 ----DNLPPRLKNLHKVS------------PSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 141/300 (47%), Gaps = 42/300 (14%)
Query: 17 LDLGDKK--YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+D GD + D +IG G+ G V A +++ G VA+KK+ ++ + + E+
Sbjct: 22 VDPGDPRSYLDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELL--FNEVV 78
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
I++ ++H N+V ++ ++ DE ++ + + D+ ++ ++ +
Sbjct: 79 IMRD---YQHENVVEMYN---SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQ 126
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + +L+ + LH+ +IHRD+K ++L+T G +K++DFG ++ +V
Sbjct: 127 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 186
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ L YG VDIWS+G ++ EM P + ++ +K I
Sbjct: 187 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-------- 238
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+N+ + + S L+ +L +PA R +AA+ L+HP+
Sbjct: 239 ----DNLPPRLKNLHKVS------------PSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 69
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 124
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 185 -APESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 136/308 (44%), Gaps = 62/308 (20%)
Query: 24 YDELCQIGCGAYGTVFKARDLQ--NKGNYVAMKKLR----VKLNEDGIPMSTLREISILK 77
++ L +G G YG VF+ R + N G AMK L+ V+ +D R I
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI---- 74
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTV-YL----IFEHVDQDLGSYMEKCPPPGLSA 132
L+ +HP IV D+I+ + YL + YL +F ++++ G +ME L+
Sbjct: 75 -LEEVKHPFIV---DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLA- 128
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV 192
++ + LH II+RDLKP+N+++ G +K+ DFGL K +D +T
Sbjct: 129 --------EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX 180
Query: 193 VV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTP 251
T+ Y APEIL+ G+ VD WS+G +M +M P F + + I +
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC---- 236
Query: 252 SMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISA--ADALE 309
+N P +A LL+ +L N A R+ A DA E
Sbjct: 237 KLNLPPY-----------------------LTQEARDLLKKLLKRNAASRLGAGPGDAGE 273
Query: 310 ---HPYFK 314
HP+F+
Sbjct: 274 VQAHPFFR 281
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 141/300 (47%), Gaps = 42/300 (14%)
Query: 17 LDLGDKK--YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+D GD + D +IG G+ G V A +++ G VA+KK+ ++ + + E+
Sbjct: 24 VDPGDPRSYLDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELL--FNEVV 80
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
I++ ++H N+V ++ ++ DE ++ + + D+ ++ ++ +
Sbjct: 81 IMRD---YQHENVVEMYN---SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQ 128
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + +L+ + LH+ +IHRD+K ++L+T G +K++DFG ++ +V
Sbjct: 129 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 188
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ L YG VDIWS+G ++ EM P + ++ +K I
Sbjct: 189 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-------- 240
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+N+ + + S L+ +L +PA R +AA+ L+HP+
Sbjct: 241 ----DNLPPRLKNLHKVS------------PSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 142/302 (47%), Gaps = 42/302 (13%)
Query: 17 LDLGDKK--YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+D GD + D +IG G+ G V A +++ G VA+KK+ ++ + + E+
Sbjct: 13 VDPGDPRSYLDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELL--FNEVV 69
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
I++ ++H N+V ++ ++ DE ++ + + D+ ++ ++ +
Sbjct: 70 IMRD---YQHENVVEMYN---SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQ 117
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + +L+ + LH+ +IHRD+K ++L+T G +K++DFG ++ +V
Sbjct: 118 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 177
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ L YG VDIWS+G ++ EM P + ++ +K I
Sbjct: 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-------- 229
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+N+ + + S L+ +L +PA R +AA+ L+HP+
Sbjct: 230 ----DNLPPRLKNLHKVS------------PSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
Query: 314 KE 315
+
Sbjct: 274 AK 275
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 141/300 (47%), Gaps = 42/300 (14%)
Query: 17 LDLGDKK--YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+D GD + D +IG G+ G V A +++ G VA+KK+ ++ + + E+
Sbjct: 67 VDPGDPRSYLDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELL--FNEVV 123
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
I++ ++H N+V ++ ++ DE ++ + + D+ ++ ++ +
Sbjct: 124 IMRD---YQHENVVEMYN---SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQ 171
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + +L+ + LH+ +IHRD+K ++L+T G +K++DFG ++ +V
Sbjct: 172 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 231
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ L YG VDIWS+G ++ EM P + ++ +K I
Sbjct: 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-------- 283
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+N+ + + S L+ +L +PA R +AA+ L+HP+
Sbjct: 284 ----DNLPPRLKNLHKVS------------PSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 87
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 142
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 203 -APESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
IG G + V AR + G VA+K + + +LN + RE+ I+K L+ HPNIV
Sbjct: 23 IGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSL-QKLFREVRIMKILN---HPNIV 77
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKVKELTRQMLKGVD 147
+ F+VI E T+YL+ E+ G + G + + + RQ++ V
Sbjct: 78 KLFEVI-------ETEKTLYLVMEYASG--GEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 128
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
+ H I+HRDLK +NLL+ +KIADFG + F L + + Y APE+
Sbjct: 129 YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGK 188
Query: 208 GYGTP-VDIWSIGCVM 222
Y P VD+WS+G ++
Sbjct: 189 KYDGPEVDVWSLGVIL 204
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 87
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 142
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 203 -APESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 142/302 (47%), Gaps = 42/302 (13%)
Query: 17 LDLGDKK--YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+D GD + D +IG G+ G V A +++ G VA+KK+ ++ + + E+
Sbjct: 17 VDPGDPRSYLDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELL--FNEVV 73
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
I++ ++H N+V ++ ++ DE ++ + + D+ ++ ++ +
Sbjct: 74 IMRD---YQHENVVEMYN---SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQ 121
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + +L+ + LH+ +IHRD+K ++L+T G +K++DFG ++ +V
Sbjct: 122 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 181
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ L YG VDIWS+G ++ EM P + ++ +K I
Sbjct: 182 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-------- 233
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+N+ + + S L+ +L +PA R +AA+ L+HP+
Sbjct: 234 ----DNLPPRLKNLHKVS------------PSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
Query: 314 KE 315
+
Sbjct: 278 AK 279
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILKQLD 80
YD ++G G + V K R+ Y A +KK + + + G+ + RE+SIL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV- 72
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELT 139
H N++ DV E V LI E V +L ++ LS +
Sbjct: 73 --LHHNVITLHDVY-------ENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L GV++LH+ +I H DLKP+N+++ +K+ DFGLA + + ++ T
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
+ APEI+ G D+WSIG + + F T+ E L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------- 228
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
NI+ + F++ F A + +L R++ +AL HP+
Sbjct: 229 ---NITSVSYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 316 KENE 319
+N+
Sbjct: 279 VDNQ 282
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 72
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + +L + + + L + E+ + K+ + T Q+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER-----IDHIKLLQYTSQIC 127
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHRDL +N+L+ +KI DFGL K D V WY
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 188 -APESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILKQLD 80
YD ++G G + V K R+ Y A +KK + + + G+ + RE+SIL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV- 72
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELT 139
H N++ DV E V LI E V +L ++ LS +
Sbjct: 73 --LHHNVITLHDVY-------ENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L GV++LH+ +I H DLKP+N+++ +K+ DFGLA + + ++ T
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
+ APEI+ G D+WSIG + + F T+ E L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------- 228
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
NI+ + F++ F A + +L R++ +AL HP+
Sbjct: 229 ---NITSVSYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 316 KENE 319
+N+
Sbjct: 279 VDNQ 282
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLNEDGIPMSTL-REISILKQLD 80
YD ++G G + V K R+ Y A +KK + + + G+ + RE+SIL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV- 72
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELT 139
H N++ DV E V LI E V +L ++ LS +
Sbjct: 73 --LHHNVITLHDVY-------ENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAG----GLKIADFGLAKTFDYDMMLTSVVVT 195
+Q+L GV++LH+ +I H DLKP+N+++ +K+ DFGLA + + ++ T
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
+ APEI+ G D+WSIG + + F T+ E L
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------- 228
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
NI+ + F++ F A + +L R++ +AL HP+
Sbjct: 229 ---NITSVSYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 316 KENE 319
+N+
Sbjct: 279 VDNQ 282
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 144/300 (48%), Gaps = 42/300 (14%)
Query: 17 LDLGDKKY--DELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+D GD + D +IG G+ G V AR+ ++ G VA+K + ++ + + E+
Sbjct: 38 VDQGDPRLLLDSYVKIGEGSTGIVCLARE-KHSGRQVAVKMMDLRKQQRRELL--FNEVV 94
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
I++ ++H N+V + ++ +E ++ + + D+ S + L+ +
Sbjct: 95 IMRD---YQHFNVVEMY---KSYLVGEELWVLMEFLQGGALTDIVSQVR------LNEEQ 142
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + +L+ + +LH+ +IHRD+K ++L+T G +K++DFG D+ +V
Sbjct: 143 IATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV 202
Query: 195 -TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSM 253
T ++ APE++ Y T VDIWS+G ++ EM P + + + V+ +K R+ +P
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK---RLRDSPP- 258
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+ KV S + D LE ML +P +R +A + L+HP+
Sbjct: 259 -----------PKLKNSHKV--SPVLRD-------FLERMLVRDPQERATAQELLDHPFL 298
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 92
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 93 -FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETC---------TRFYTAEI 141
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + S V T Y
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 201
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 47/297 (15%)
Query: 20 GDKKYDELCQI-GCGAYGTVFKARDLQ--NKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
D + EL ++ G G++G VF R + + G+ AMK L+ + + T E IL
Sbjct: 25 ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDIL 84
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKV 135
++ HP +V+ +H ++ + +YLI + + DL + + K + V
Sbjct: 85 ADVN---HPFVVK----LHYAFQTEGK---LYLILDFLRGGDLFTRLSK--EVMFTEEDV 132
Query: 136 KELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-TFDYDMMLTSVVV 194
K ++ G+D LHS II+RDLKP+N+L+ G +K+ DFGL+K D++ S
Sbjct: 133 KFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCG 192
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV-IGTPSM 253
T+ Y APE++ G+ D WS G +M EM F E + I + +G P
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF 252
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRI-SAADALE 309
++A SLL ++ NPA+R+ S D E
Sbjct: 253 ----------------------------LSTEAQSLLRALFKRNPANRLGSGPDGAE 281
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 137/306 (44%), Gaps = 42/306 (13%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISIL 76
+L D ++++ ++G G G VFK + +K + + M + + L + I +RE+ +L
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFK---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 77
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV- 135
+ ++ P IV F+ + + + + EH+D GS + G ++
Sbjct: 78 HECNS---PYIVGFYGAFYSD-------GEISICMEHMDG--GSLDQVLKKAGRIPEQIL 125
Query: 136 KELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+++ ++KG+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M S V
Sbjct: 126 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVG 184
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPSM 253
T Y +PE L Y DIWS+G + EM P+ S + + + ++ P
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP- 243
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+ P + FS F D +K L NPA+R + H +
Sbjct: 244 PKLPSGV--------------FSLEFQDFVNKC-------LIKNPAERADLKQLMVHAFI 282
Query: 314 KEKENE 319
K + E
Sbjct: 283 KRSDAE 288
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 139/309 (44%), Gaps = 40/309 (12%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISI 75
++L D ++++ ++G G G VFK + +K + + M + + L + I +RE+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
L + ++ P IV F+ + + + + EH+D GS + G ++
Sbjct: 58 LHECNS---PYIVGFYGAFYSD-------GEISICMEHMDG--GSLDQVLKKAGRIPEQI 105
Query: 136 -KELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+++ ++KG+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M S V
Sbjct: 106 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV 164
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW---RLVPLFCASTEVEQLKCIFRVIGT 250
T Y +PE L Y DIWS+G + EM +P A + IF ++
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDY 224
Query: 251 PSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEH 310
+NE P + FS F D +K L NPA+R + H
Sbjct: 225 -IVNEPPPKL----------PSGVFSLEFQDFVNKC-------LIKNPAERADLKQLMVH 266
Query: 311 PYFKEKENE 319
+ K + E
Sbjct: 267 AFIKRSDAE 275
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 27 LCQIGCGAYGTVFKAR--DLQ-NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
L Q+G G +G+V R LQ N G VA+KKL+ E REI ILK L +
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSL---Q 70
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H NIV++ V + + + + YL + + L + E+ + K+ + T Q+
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQIC 125
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L + R IHR+L +N+L+ +KI DFGL K D V WY
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
APE L + D+WS G V+ E++ +
Sbjct: 186 -APESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V + Q+ G VA+K+ R +L+ L EI I+K+L+ HPN+V
Sbjct: 22 RLGTGGFGYVLRWIH-QDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLN---HPNVV 76
Query: 89 RFFDVIH--QNILSDERYLTVYLIFEHVDQ-DLGSYM---EKCPPPGLSASKVKELTRQM 142
+V Q + ++ L L E+ + DL Y+ E C GL ++ L +
Sbjct: 77 SAREVPDGLQKLAPNDLPL---LAMEYCEGGDLRKYLNQFENCC--GLKEGPIRTLLSDI 131
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGL---KIADFGLAKTFDYDMMLTSVVVTLWYR 199
+ +LH +RIIHRDLKP+N+++ KI D G AK D + T V TL Y
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 191
Query: 200 APEILLNLGYGTPVDIWSIGCVMAE 224
APE+L Y VD WS G + E
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFE 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V + Q+ G VA+K+ R +L+ L EI I+K+L+ HPN+V
Sbjct: 21 RLGTGGFGYVLRWIH-QDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLN---HPNVV 75
Query: 89 RFFDVIH--QNILSDERYLTVYLIFEHVDQ-DLGSYM---EKCPPPGLSASKVKELTRQM 142
+V Q + ++ L L E+ + DL Y+ E C GL ++ L +
Sbjct: 76 SAREVPDGLQKLAPNDLPL---LAMEYCEGGDLRKYLNQFENCC--GLKEGPIRTLLSDI 130
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGL---KIADFGLAKTFDYDMMLTSVVVTLWYR 199
+ +LH +RIIHRDLKP+N+++ KI D G AK D + T V TL Y
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190
Query: 200 APEILLNLGYGTPVDIWSIGCVMAE 224
APE+L Y VD WS G + E
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFE 215
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 35/248 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
++E+ +G GA+G V KAR+ + Y A+KK+R E+ + + L E+ +L L+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALD-SRYYAIKKIR--HTEEKLS-TILSEVMLLASLN--- 60
Query: 84 HPNIVRFFDV------IHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK- 136
H +VR++ + + + ++ T+++ E+ + G+ + L+ + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCEN--GTLYDLIHSENLNQQRDEY 118
Query: 137 -ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM-------- 187
L RQ+L+ + ++HS IIHRDLKP N+ I + +KI DFGLAK +
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 188 -------MLTSVVVTLWYRAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
LTS + T Y A E+L G Y +D++S+G + EM + P V
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM--IYPFSTGMERVN 236
Query: 240 QLKCIFRV 247
LK + V
Sbjct: 237 ILKKLRSV 244
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + IG G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E++ D+ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYMPGGDMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +K+ADFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + IG G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E++ D+ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYMPGGDMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +K+ADFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 48/305 (15%)
Query: 26 ELCQ-IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST---LREISILKQLDT 81
ELC+ IG G + V + + + G A+K + V +ST RE SI L
Sbjct: 27 ELCEVIGKGPFSVVRRCIN-RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-- 83
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGL--SASKVKEL 138
+HP+IV + + + +Y++FE +D DL + K G S +
Sbjct: 84 -KHPHIVELLETYSSDGM-------LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLIT---RAGGLKIADFGLA-KTFDYDMMLTSVVV 194
RQ+L+ + + H + IIHRD+KP +L+ + +K+ FG+A + + ++ V
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVG 195
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWR-LVPLFCASTEVEQLKCIFRVIGTPSM 253
T + APE++ YG PVD+W G ++ + +P + T+ + I + G M
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIK--GKYKM 251
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
N Q+S ++ S A L+ ML +PA+RI+ +AL HP+
Sbjct: 252 NP------------RQWSHISES---------AKDLVRRMLMLDPAERITVYEALNHPWL 290
Query: 314 KEKEN 318
KE++
Sbjct: 291 KERDR 295
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + IG G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +K+ADFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 48/305 (15%)
Query: 26 ELCQ-IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST---LREISILKQLDT 81
ELC+ IG G + V + + + G A+K + V +ST RE SI L
Sbjct: 29 ELCEVIGKGPFSVVRRCIN-RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-- 85
Query: 82 FEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGL--SASKVKEL 138
+HP+IV + + + +Y++FE +D DL + K G S +
Sbjct: 86 -KHPHIVELLETYSSDGM-------LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLIT---RAGGLKIADFGLA-KTFDYDMMLTSVVV 194
RQ+L+ + + H + IIHRD+KP +L+ + +K+ FG+A + + ++ V
Sbjct: 138 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVG 197
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWR-LVPLFCASTEVEQLKCIFRVIGTPSM 253
T + APE++ YG PVD+W G ++ + +P + T+ + I + G M
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIK--GKYKM 253
Query: 254 NEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
N Q+S ++ S A L+ ML +PA+RI+ +AL HP+
Sbjct: 254 NP------------RQWSHISES---------AKDLVRRMLMLDPAERITVYEALNHPWL 292
Query: 314 KEKEN 318
KE++
Sbjct: 293 KERDR 297
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G GA+G V A +D + VA+K
Sbjct: 22 YELPEDPKWEFPRDKLTLGKP-------LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E+ + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 75 LKDDATEEDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 124
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G +M E++ L VE+L
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D L D L LG +G GA+G V A +D N+ VA+K
Sbjct: 15 YELPEDPRWELPRDRLVLGKP-------LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 67
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 68 LKSDATEKDLS-DLISEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 117
Query: 116 Q-DLGSYMEKCPPPGL--------------SASKVKELTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y++ PPGL S+ + Q+ +G+++L S + IHRDL
Sbjct: 118 KGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 177
Query: 161 PQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G ++ E++ L VE+L
Sbjct: 238 FGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 93
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 94 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 142
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + S V T Y
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNK---GNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
K+Y +G G + ++ D+ K V K + +K ++ MST EI+I K
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMST--EIAIHKS 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
LD +P++V F D+ ++ V L L + + ++ + +
Sbjct: 99 LD---NPHVVGF-----HGFFEDDDFVYVVLEICRRRSLLELHKRR---KAVTEPEARYF 147
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV-TLW 197
RQ ++GV +LH++R+IHRDLK NL + +KI DFGLA ++D + T
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPN 207
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
Y APE+L G+ VDIWS+GC++ + ++G P P
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTL---------------------LVGKP-----P 241
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
S + ++ + K +S + A++L+ ML +P R S A+ L +F
Sbjct: 242 FETSCLKETYIRIKKNEYS-VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 44/284 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D L D L LG +G GA+G V A +D N+ VA+K
Sbjct: 15 YELPEDPRWELPRDRLVLGKP-------LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 67
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 68 LKSDATEKDLS-DLISEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 117
Query: 116 Q-DLGSYMEKCPPPGL--------------SASKVKELTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y++ PPGL S+ + Q+ +G+++L S + IHRDL
Sbjct: 118 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 177
Query: 161 PQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 218 IGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENIS 261
G ++ E++ L VE+L F+++ + P N +
Sbjct: 238 FGVLLWEIFTLGGSPYPGVPVEEL---FKLLKEGHRMDKPSNCT 278
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 89
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 90 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 138
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + S V T Y
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D L D L LG +G GA+G V A +D N+ VA+K
Sbjct: 8 YELPEDPRWELPRDRLVLGKP-------LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 60
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 61 LKSDATEKDLS-DLISEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 110
Query: 116 Q-DLGSYMEKCPPPGL--------------SASKVKELTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y++ PPGL S+ + Q+ +G+++L S + IHRDL
Sbjct: 111 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 170
Query: 161 PQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 171 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 230
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G ++ E++ L VE+L
Sbjct: 231 FGVLLWEIFTLGGSPYPGVPVEEL 254
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D L D L LG +G GA+G V A +D N+ VA+K
Sbjct: 4 YELPEDPRWELPRDRLVLGKP-------LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 56
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 57 LKSDATEKDLS-DLISEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 106
Query: 116 Q-DLGSYMEKCPPPGL--------------SASKVKELTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y++ PPGL S+ + Q+ +G+++L S + IHRDL
Sbjct: 107 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 166
Query: 161 PQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 167 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 226
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G ++ E++ L VE+L
Sbjct: 227 FGVLLWEIFTLGGSPYPGVPVEEL 250
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D L D L LG +G GA+G V A +D N+ VA+K
Sbjct: 7 YELPEDPRWELPRDRLVLGKP-------LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 59
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 60 LKSDATEKDLS-DLISEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 109
Query: 116 Q-DLGSYMEKCPPPGL--------------SASKVKELTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y++ PPGL S+ + Q+ +G+++L S + IHRDL
Sbjct: 110 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 169
Query: 161 PQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 170 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 229
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G ++ E++ L VE+L
Sbjct: 230 FGVLLWEIFTLGGSPYPGVPVEEL 253
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D L D L LG +G GA+G V A +D N+ VA+K
Sbjct: 15 YELPEDPRWELPRDRLVLGKP-------LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 67
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 68 LKSDATEKDLS-DLISEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 117
Query: 116 Q-DLGSYMEKCPPPGL--------------SASKVKELTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y++ PPGL S+ + Q+ +G+++L S + IHRDL
Sbjct: 118 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 177
Query: 161 PQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G ++ E++ L VE+L
Sbjct: 238 FGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D L D L LG +G GA+G V A +D N+ VA+K
Sbjct: 56 YELPEDPRWELPRDRLVLGKP-------LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 108
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 109 LKSDATEKDLS-DLISEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 158
Query: 116 Q-DLGSYMEKCPPPGL--------------SASKVKELTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y++ PPGL S+ + Q+ +G+++L S + IHRDL
Sbjct: 159 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 218
Query: 161 PQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 219 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 278
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G ++ E++ L VE+L
Sbjct: 279 FGVLLWEIFTLGGSPYPGVPVEEL 302
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 128/301 (42%), Gaps = 53/301 (17%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDG--IPMSTLREISILKQLD 80
+Y+ + IG G +G RD Q A + + VK E G I + REI + L
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQ------ANELVAVKYIERGEKIDENVKREIINHRSL- 72
Query: 81 TFEHPNIVRFFDVI----HQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
HPNIVRF +VI H I+ + Y + +FE + C S + +
Sbjct: 73 --RHPNIVRFKEVILTPTHLAIVME--YASGGELFERI----------CNAGRFSEDEAR 118
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLI--TRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+Q++ GV + H+ ++ HRDLK +N L+ + A LKIADFG +K S V
Sbjct: 119 FFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVG 178
Query: 195 TLWYRAPEILLNLGY-GTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL-KCIFRVIGTPS 252
T Y APE+LL Y G D+WS G + M F E + K I R++
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV-- 236
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
QY+ + I +C L+ + +PA RIS + H +
Sbjct: 237 ----------------QYAIPDYVHISPEC----RHLISRIFVADPAKRISIPEIRNHEW 276
Query: 313 F 313
F
Sbjct: 277 F 277
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G GA+G V A +D + VA+K
Sbjct: 22 YELPEDPKWEFPRDKLTLGKP-------LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIIHLLGACTQDG-------PLYVIVEYAS 124
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G +M E++ L VE+L
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISI 75
++L D ++++ ++G G G VFK + +K + + M + + L + I +RE+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
L + ++ P IV F+ + + + + EH+D GS + G ++
Sbjct: 58 LHECNS---PYIVGFYGAFYSD-------GEISICMEHMDG--GSLDQVLKKAGRIPEQI 105
Query: 136 -KELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+++ ++KG+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M S V
Sbjct: 106 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV 164
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T Y +PE L Y DIWS+G + EM
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISI 75
++L D ++++ ++G G G VFK + +K + + M + + L + I +RE+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
L + ++ P IV F+ + + + + EH+D GS + G ++
Sbjct: 58 LHECNS---PYIVGFYGAFYSD-------GEISICMEHMDG--GSLDQVLKKAGRIPEQI 105
Query: 136 -KELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+++ ++KG+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M S V
Sbjct: 106 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV 164
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T Y +PE L Y DIWS+G + EM
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISI 75
++L D ++++ ++G G G VFK + +K + + M + + L + I +RE+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
L + ++ P IV F+ + + + + EH+D GS + G ++
Sbjct: 58 LHECNS---PYIVGFYGAFYSD-------GEISICMEHMDG--GSLDQVLKKAGRIPEQI 105
Query: 136 -KELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+++ ++KG+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M S V
Sbjct: 106 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV 164
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T Y +PE L Y DIWS+G + EM
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNK---GNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
K+Y +G G + ++ D+ K V K + +K ++ MST EI+I K
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMST--EIAIHKS 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
LD +P++V F D+ ++ V L L + + ++ + +
Sbjct: 99 LD---NPHVVGF-----HGFFEDDDFVYVVLEICRRRSLLELHKRR---KAVTEPEARYF 147
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV-TLW 197
RQ ++GV +LH++R+IHRDLK NL + +KI DFGLA ++D + T
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPN 207
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
Y APE+L G+ VDIWS+GC++ + ++G P P
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTL---------------------LVGKP-----P 241
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
S + ++ + K +S + A++L+ ML +P R S A+ L +F
Sbjct: 242 FETSCLKETYIRIKKNEYS-VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISI 75
++L D ++++ ++G G G VFK + +K + + M + + L + I +RE+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
L + ++ P IV F+ + + + + EH+D GS + G ++
Sbjct: 58 LHECNS---PYIVGFYGAFYSD-------GEISICMEHMDG--GSLDQVLKKAGRIPEQI 105
Query: 136 -KELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+++ ++KG+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M S V
Sbjct: 106 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV 164
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T Y +PE L Y DIWS+G + EM
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G GA+G V A +D + VA+K
Sbjct: 22 YELPEDPKWEFPRDKLTLGKP-------LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 124
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G +M E++ L VE+L
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNK---GNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
K+Y +G G + ++ D+ K V K + +K ++ MST EI+I K
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMST--EIAIHKS 82
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
LD +P++V F D+ ++ V L L + + ++ + +
Sbjct: 83 LD---NPHVVGF-----HGFFEDDDFVYVVLEICRRRSLLELHKRR---KAVTEPEARYF 131
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTLW 197
RQ ++GV +LH++R+IHRDLK NL + +KI DFGLA ++D + T
Sbjct: 132 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN 191
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
Y APE+L G+ VDIWS+GC++ + ++G P P
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTL---------------------LVGKP-----P 225
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
S + ++ + K +S + A++L+ ML +P R S A+ L +F
Sbjct: 226 FETSCLKETYIRIKKNEYS-VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 48/298 (16%)
Query: 33 GAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRF 90
G +G V+KA QNK V A K + K E+ + EI IL D HPNIV+
Sbjct: 21 GDFGKVYKA---QNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCD---HPNIVKL 72
Query: 91 FDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLH 150
D + E L + + F + + M + P L+ S+++ + +Q L +++LH
Sbjct: 73 LDAFYY-----ENNLWILIEF-CAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLH 125
Query: 151 SHRIIHRDLKPQNLLITRAGGLKIADFGLA--KTFDYDMMLTSVVVTLWYRAPEILL--- 205
++IIHRDLK N+L T G +K+ADFG++ T S + T ++ APE+++
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 206 --NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLM 263
+ Y D+WS+G + EM + P E+ ++ + ++ + +E P
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKI----AKSEPP------ 232
Query: 264 WSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEPL 321
+ Q S+ +S+ F D L+ L N R + + L+HP+ N+P+
Sbjct: 233 --TLAQPSR--WSSNFKD-------FLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 279
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G GA+G V A +D + VA+K
Sbjct: 22 YELPEDPKWEFPRDKLTLGKP-------LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIITLLGACTQDG-------PLYVIVEYAS 124
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G +M E++ L VE+L
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNK---GNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
K+Y +G G + ++ D+ K V K + +K ++ MST EI+I K
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMST--EIAIHKS 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
LD +P++V F D+ ++ V L L + + ++ + +
Sbjct: 99 LD---NPHVVGF-----HGFFEDDDFVYVVLEICRRRSLLELHKRR---KAVTEPEARYF 147
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTLW 197
RQ ++GV +LH++R+IHRDLK NL + +KI DFGLA ++D + T
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN 207
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
Y APE+L G+ VDIWS+GC++ + ++G P P
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTL---------------------LVGKP-----P 241
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
S + ++ + K +S + A++L+ ML +P R S A+ L +F
Sbjct: 242 FETSCLKETYIRIKKNEYS-VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 90
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 91 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 139
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + + V T Y
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 31/246 (12%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
++E+ +G GA+G V KAR+ + Y A+KK+R E+ + + L E+ +L L+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALD-SRYYAIKKIR--HTEEKLS-TILSEVMLLASLN--- 60
Query: 84 HPNIVRFFDV------IHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE 137
H +VR++ + + + ++ T+++ E+ + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM---------- 187
L RQ+L+ + ++HS IIHRDLKP N+ I + +KI DFGLAK +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 188 -----MLTSVVVTLWYRAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL 241
LTS + T Y A E+L G Y +D++S+G + EM + P V L
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM--IYPFSTGMERVNIL 238
Query: 242 KCIFRV 247
K + V
Sbjct: 239 KKLRSV 244
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 136/287 (47%), Gaps = 40/287 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+IG G+ G V A + ++ G VA+KK+ ++ + + E+ I++ + H N+V
Sbjct: 52 KIGEGSTGIVCIATE-KHTGKQVAVKKMDLRKQQRRELL--FNEVVIMRD---YHHDNVV 105
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDF 148
D+ ++ DE ++ + + D+ ++ ++ ++ + +L+ + +
Sbjct: 106 ---DMYSSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIATVCLSVLRALSY 156
Query: 149 LHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV-TLWYRAPEILLNL 207
LH+ +IHRD+K ++L+T G +K++DFG ++ +V T ++ APE++ L
Sbjct: 157 LHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRL 216
Query: 208 GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
YGT VDIWS+G ++ EM P + ++ ++ I + P +
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI--------RDSLPPRV------- 261
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+ KV+ S L+ ML P+ R +A + L HP+ K
Sbjct: 262 KDLHKVS---------SVLRGFLDLMLVREPSQRATAQELLGHPFLK 299
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 19/211 (9%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISIL 76
+L D ++++ ++G G G VFK + +K + + M + + L + I +RE+ +L
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFK---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 120
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV- 135
+ ++ P IV F+ + + + + EH+D GS + G ++
Sbjct: 121 HECNS---PYIVGFYGAFYSD-------GEISICMEHMDG--GSLDQVLKKAGRIPEQIL 168
Query: 136 KELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+++ ++KG+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M S V
Sbjct: 169 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVG 227
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T Y +PE L Y DIWS+G + EM
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 258
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 19/211 (9%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISIL 76
+L D ++++ ++G G G VFK + +K + + M + + L + I +RE+ +L
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFK---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 85
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV- 135
+ ++ P IV F+ + + + + EH+D GS + G ++
Sbjct: 86 HECNS---PYIVGFYGAFYSD-------GEISICMEHMDG--GSLDQVLKKAGRIPEQIL 133
Query: 136 KELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+++ ++KG+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M S V
Sbjct: 134 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVG 192
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T Y +PE L Y DIWS+G + EM
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 92
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 93 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 141
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G GA+G V A +D + VA+K
Sbjct: 22 YELPEDPKWEFPRDKLTLGKP-------LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 124
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T ++IADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 185 ARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G +M E++ L VE+L
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 143/316 (45%), Gaps = 52/316 (16%)
Query: 16 SLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISI 75
S+++ + + ++G GAYG V K R + + G +A+K++R +N + + +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPS-GQIMAVKRIRATVN-------SQEQKRL 52
Query: 76 LKQLD----TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLS 131
L LD T + P V F+ + R V++ E +D L + ++ G +
Sbjct: 53 LMDLDISMRTVDCPFTVTFYGALF-------REGDVWICMELMDTSLDKFYKQVIDKGQT 105
Query: 132 ASK--VKELTRQMLKGVDFLHSH-RIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
+ + ++ ++K ++ LHS +IHRD+KP N+LI G +K+ DFG++ D+
Sbjct: 106 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165
Query: 189 LTSVVVTLWYRAPEIL---LNL-GYGTPVDIWSIGCVMAEMWRL-VPLFCASTEVEQLKC 243
Y APE + LN GY DIWS+G M E+ L P T +QLK
Sbjct: 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK- 224
Query: 244 IFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRIS 303
+V+ PS Q FSA F+D S+ L N +R +
Sbjct: 225 --QVVEEPS---------------PQLPADKFSAEFVDFTSQC-------LKKNSKERPT 260
Query: 304 AADALEHPYFKEKENE 319
+ ++HP+F E++
Sbjct: 261 YPELMQHPFFTLHESK 276
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 60/260 (23%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
DL + +Y + ++G G + TV+ D+Q K +VAMK ++ + + ++ + ++
Sbjct: 27 DLFNGRYHVIRKLGWGHFSTVWLCWDMQGK-RFVAMKVVKSAQHYTETALDEIKLLKCVR 85
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE 137
+ D + PN +I +S + V ++FE + L ++ K GL VK
Sbjct: 86 ESDPSD-PNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKS 144
Query: 138 LTRQMLKGVDFLHSH-RIIHRDLKPQNLLI-----------------TRAGG-------- 171
+ RQ+L+G+D+LHS +IIH D+KP+N+L+ +AG
Sbjct: 145 IIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAV 204
Query: 172 ----------------------LKIADFGLA----KTFDYDMMLTSVVVTLWYRAPEILL 205
+KIAD G A K F D+ T YR+ E+L+
Sbjct: 205 STAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQ------TRQYRSIEVLI 258
Query: 206 NLGYGTPVDIWSIGCVMAEM 225
GY TP DIWS C+ E+
Sbjct: 259 GAGYSTPADIWSTACMAFEL 278
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 70
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 71 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 119
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 120 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 90
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 91 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 139
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 69
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 70 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 118
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 216
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 128/299 (42%), Gaps = 49/299 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
+Y+ + IG G +G RD Q+ VA+K + + I + REI + L
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIE---RGEKIAANVKREIINHRSL--- 72
Query: 83 EHPNIVRFFDVI----HQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HPNIVRF +VI H I+ + Y + +FE + C S + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVME--YASGGELFERI----------CNAGRFSEDEARFF 120
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI--TRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
+Q++ GV + H+ ++ HRDLK +N L+ + A LKI DFG +K+ S V T
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 180
Query: 197 WYRAPEILLNLGY-GTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL-KCIFRVIGTPSMN 254
Y APE+LL Y G D+WS G + M F E + K I R++
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV---- 236
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
QY+ + I +C L+ + +PA RIS + H +F
Sbjct: 237 --------------QYAIPDYVHISPEC----RHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 92
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 93 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 141
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 93
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 94 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 142
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 90
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 91 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 139
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 95
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 96 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 144
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 145 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL E TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKE---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+ ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYAPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NL+I + G +K+ DFGLAK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 92
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 93 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 141
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 67
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 68 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 116
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 117 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 214
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 68
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 69 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 117
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 215
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 92
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 93 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 141
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 74
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 75 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 123
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 124 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 52/307 (16%)
Query: 25 DELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLD---- 80
+ + ++G GAYG V K R + + G +A+K++R +N + + +L LD
Sbjct: 54 EPIMELGRGAYGVVEKMRHVPS-GQIMAVKRIRATVN-------SQEQKRLLMDLDISMR 105
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK--VKEL 138
T + P V F+ + R V++ E +D L + ++ G + + + ++
Sbjct: 106 TVDCPFTVTFYGALF-------REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKI 158
Query: 139 TRQMLKGVDFLHSH-RIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
++K ++ LHS +IHRD+KP N+LI G +K+ DFG++ + T
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP 218
Query: 198 YRAPEIL---LNL-GYGTPVDIWSIGCVMAEMWRL-VPLFCASTEVEQLKCIFRVIGTPS 252
Y APE + LN GY DIWS+G M E+ L P T +QLK +V+ PS
Sbjct: 219 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK---QVVEEPS 275
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
Q FSA F+D S+ L N +R + + ++HP+
Sbjct: 276 ---------------PQLPADKFSAEFVDFTSQC-------LKKNSKERPTYPELMQHPF 313
Query: 313 FKEKENE 319
F E++
Sbjct: 314 FTLHESK 320
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 89
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 90 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 138
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 92
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 93 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 141
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 41/251 (16%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G GA+G V A +D + VA+K
Sbjct: 22 YELPEDPKWEFPRDKLTLGKP-------LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 124
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 125 KGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ D T+ + + + APE L + Y D+WS
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 218 IGCVMAEMWRL 228
G +M E++ L
Sbjct: 245 FGVLMWEIFTL 255
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 34/236 (14%)
Query: 30 IGCGAYGTVFKA------RDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+G GA+G V A +D N+ VA+K L+ E + + E+ ++K + +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIG--K 77
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGL------------ 130
H NI+ Q+ +Y+I E+ + +L Y++ PPGL
Sbjct: 78 HKNIINLLGACTQDG-------PLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEE 130
Query: 131 --SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT---FDY 185
S+ + Q+ +G+++L S + IHRDL +N+L+T +KIADFGLA+ DY
Sbjct: 131 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL 241
T+ + + + APE L + Y D+WS G ++ E++ L VE+L
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + + GN+ AMK L VKL +
Sbjct: 55 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKH-KESGNHYAMKILDKQKVVKLKQ---I 106
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 107 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 156
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 157 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-- 212
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
++ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 213 KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTW--XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 41/251 (16%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G G +G V A +D + VA+K
Sbjct: 14 YELPEDPKWEFPRDKLTLGKP-------LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM 66
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 67 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 116
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 176
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 177 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 236
Query: 218 IGCVMAEMWRL 228
G +M E++ L
Sbjct: 237 FGVLMWEIFTL 247
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ TV AR+L Y + + + R + E+ +P T RE ++ +LD HP V
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HPFFV 100
Query: 89 RFFDVIH--QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+ + + + Y + +++ + +GS+ E C + T +++ +
Sbjct: 101 KLYFCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEIVSAL 150
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYRAPEI 203
++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y +PE+
Sbjct: 151 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 204 LLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
L D+W++GC++ ++ +P F A E
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D L D L LG +G GA+G V A +D N+ VA+K
Sbjct: 15 YELPEDPRWELPRDRLVLGKP-------LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 67
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 68 LKSDATEKDLS-DLISEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 117
Query: 116 Q-DLGSYMEKCPPPGL--------------SASKVKELTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y++ PPGL S+ + Q+ +G+++L S + IHRDL
Sbjct: 118 KGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 177
Query: 161 PQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ D T+ + + + APE L + Y D+WS
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G ++ E++ L VE+L
Sbjct: 238 FGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G G +G V A +D + VA+K
Sbjct: 11 YELPEDPKWEFPRDKLTLGKP-------LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM 63
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 64 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 113
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 114 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 173
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 174 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 233
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G +M E++ L VE+L
Sbjct: 234 FGVLMWEIFTLGGSPYPGIPVEEL 257
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 41/251 (16%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G G +G V A +D + VA+K
Sbjct: 9 YELPEDPKWEFPRDKLTLGKP-------LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM 61
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 62 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 111
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLT 171
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 172 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 231
Query: 218 IGCVMAEMWRL 228
G +M E++ L
Sbjct: 232 FGVLMWEIFTL 242
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 128/299 (42%), Gaps = 49/299 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
+Y+ + IG G +G RD Q+ VA+K + + I + REI + L
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQS-NELVAVKYIE---RGEKIDENVKREIINHRSL--- 71
Query: 83 EHPNIVRFFDVI----HQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HPNIVRF +VI H I+ + Y + +FE + C S + +
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVME--YASGGELFERI----------CNAGRFSEDEARFF 119
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI--TRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
+Q++ GV + H+ ++ HRDLK +N L+ + A LKI DFG +K+ S V T
Sbjct: 120 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 179
Query: 197 WYRAPEILLNLGY-GTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL-KCIFRVIGTPSMN 254
Y APE+LL Y G D+WS G + M F E + K I R++
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV---- 235
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
QY+ + I +C L+ + +PA RIS + H +F
Sbjct: 236 --------------QYAIPDYVHISPEC----RHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 122/291 (41%), Gaps = 45/291 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G++G VF A + + + A+K L+ V L +D + T+ E +L +EHP +
Sbjct: 26 LGKGSFGKVFLA-EFKKTNQFFAIKALKKDVVLMDDDVE-CTMVEKRVLSL--AWEHPFL 81
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
F ++ + E+++ DL +++ C LS + +++ G+
Sbjct: 82 THMFCTFQTK-------ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGL 132
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-TFDYDMMLTSVVVTLWYRAPEILL 205
FLHS I++RDLK N+L+ + G +KIADFG+ K D T Y APEILL
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL 192
Query: 206 NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWS 265
Y VD WS G ++ EM F E E I + P W E
Sbjct: 193 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLE------- 243
Query: 266 SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISA-ADALEHPYFKE 315
+A LL + P R+ D +HP F+E
Sbjct: 244 ------------------KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 41/251 (16%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G G +G V A +D + VA+K
Sbjct: 68 YELPEDPKWEFPRDKLTLGKP-------LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM 120
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 121 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 170
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 230
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 231 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 290
Query: 218 IGCVMAEMWRL 228
G +M E++ L
Sbjct: 291 FGVLMWEIFTL 301
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G +G V K + G +A K ++ + +D + EIS++ QLD H N+++
Sbjct: 97 LGGGRFGQVHKCEETAT-GLKLAAKIIKTRGMKDKEEVKN--EISVMNQLD---HANLIQ 150
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL--TRQMLKGVD 147
+D E + L+ E+VD G ++ + +++ + +Q+ +G+
Sbjct: 151 LYDAF-------ESKNDIVLVMEYVDG--GELFDRIIDESYNLTELDTILFMKQICEGIR 201
Query: 148 FLHSHRIIHRDLKPQNLL-ITR-AGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILL 205
+H I+H DLKP+N+L + R A +KI DFGLA+ + L T + APE++
Sbjct: 202 HMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVN 261
Query: 206 NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWS 265
P D+WS+G + + + F + E L I ++ W
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI---------------LACRWD 306
Query: 266 SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
++ F D +A + +L + RISA++AL+HP+ +
Sbjct: 307 LEDEE--------FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 99 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 146
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK ++ T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--TLCGTPE 204
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 122/291 (41%), Gaps = 45/291 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G++G VF A + + + A+K L+ V L +D + T+ E +L +EHP +
Sbjct: 25 LGKGSFGKVFLA-EFKKTNQFFAIKALKKDVVLMDDDVE-CTMVEKRVLSL--AWEHPFL 80
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
F ++ + E+++ DL +++ C LS + +++ G+
Sbjct: 81 THMFCTFQTK-------ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGL 131
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-TFDYDMMLTSVVVTLWYRAPEILL 205
FLHS I++RDLK N+L+ + G +KIADFG+ K D T Y APEILL
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL 191
Query: 206 NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWS 265
Y VD WS G ++ EM F E E I + P W E
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLE------- 242
Query: 266 SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISA-ADALEHPYFKE 315
+A LL + P R+ D +HP F+E
Sbjct: 243 ------------------KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR-EISILKQLDTFEHPNIV 88
+G GA+ VF + + G A+K ++ S+L EI++LK++ +H NIV
Sbjct: 17 LGSGAFSEVFLVKQ-RLTGKLFALKCIK---KSPAFRDSSLENEIAVLKKI---KHENIV 69
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT-RQMLKGVD 147
D+ E YL+ + V G ++ G+ K L +Q+L V
Sbjct: 70 TLEDIY-------ESTTHYYLVMQLVSG--GELFDRILERGVYTEKDASLVIQQVLSAVK 120
Query: 148 FLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEIL 204
+LH + I+HRDLKP+NLL + I DFGL+K + + ++++ T Y APE+L
Sbjct: 121 YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVL 179
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
Y VD WSIG + + P F TE + E I +
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF----------------EKIKEGY 223
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
FE S + D A + +L +P +R + AL HP+
Sbjct: 224 YEFE-------SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTW--XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 83
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 84 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 131
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK ++ T
Sbjct: 132 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--TLCGTPE 189
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 231
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 41/251 (16%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G GA+G V A +D + VA+K
Sbjct: 22 YELPEDPKWEFPRDKLTLGKP-------LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I E+
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVEYAS 124
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ D T+ + + + APE L + Y D+WS
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 218 IGCVMAEMWRL 228
G +M E++ L
Sbjct: 245 FGVLMWEIFTL 255
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G GA+G V A +D + VA+K
Sbjct: 22 YELPEDPKWEFPRDKLTLGKP-------LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I +
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVAYAS 124
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G +M E++ L VE+L
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 129/299 (43%), Gaps = 41/299 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G + V + ++ G A K L+ + L EI++L+ + P ++
Sbjct: 36 ELGRGKFAVVRQCIS-KSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSC--PRVI 92
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP---GLSASKVKELTRQMLKG 145
+V E + LI E+ G C P +S + V L +Q+L+G
Sbjct: 93 NLHEVY-------ENTSEIILILEYAAG--GEIFSLCLPELAEMVSENDVIRLIKQILEG 143
Query: 146 VDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPE 202
V +LH + I+H DLKPQN+L++ G +KI DFG+++ + L ++ T Y APE
Sbjct: 144 VYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPE 203
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISL 262
IL T D+W+IG + + F E I +V N+
Sbjct: 204 ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV-----------NVD- 251
Query: 263 MWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEPL 321
YS+ FS++ A ++S+L NP R +A L H + ++ + E L
Sbjct: 252 -------YSEETFSSV----SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENL 299
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + + GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKH-KESGNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + + GN+ AMK L VKL +
Sbjct: 35 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKH-KESGNHYAMKILDKQKVVKLKQ---I 86
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 87 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 136
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 137 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 195 RTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
LDL DK +G G++ K + K N + VK+ + +T +EI+ L
Sbjct: 12 LDLKDKP------LGEGSFSICRKC--VHKKSN----QAFAVKIISKRMEANTQKEITAL 59
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSASKV 135
K + HPNIV+ +V H L +L+ E ++ G E+ S ++
Sbjct: 60 KLCEG--HPNIVKLHEVFHDQ-------LHTFLVMELLNG--GELFERIKKKKHFSETEA 108
Query: 136 KELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTFDYDMM-LTS 191
+ R+++ V +H ++HRDLKP+NLL T +KI DFG A+ D L +
Sbjct: 109 SYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168
Query: 192 VVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
TL Y APE+L GY D+WS+G ++ M
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTM 202
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 44/305 (14%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISIL 76
+L D ++++ ++G G G VFK + +K + + M + + L + I +RE+ +L
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFK---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 61
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV- 135
+ ++ P IV F+ + + + + EH+D GS + G ++
Sbjct: 62 HECNS---PYIVGFYGAFYSD-------GEISICMEHMDG--GSLDQVLKKAGRIPEQIL 109
Query: 136 KELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+++ ++KG+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M V
Sbjct: 110 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEMANEFVG 168
Query: 195 TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN 254
T Y +PE L Y DIWS+G + EM IF ++ +N
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM-------AVGRYPRPPMAIFELLDY-IVN 220
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
E P + FS F D +K L NPA+R + H + K
Sbjct: 221 EPPPKL----------PSAVFSLEFQDFVNKC-------LIKNPAERADLKQLMVHAFIK 263
Query: 315 EKENE 319
+ E
Sbjct: 264 RSDAE 268
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 124/290 (42%), Gaps = 47/290 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G GA+ V A + + G A+K + K + G S EI++L+++ +H NIV
Sbjct: 30 LGTGAFSEVVLAEE-KATGKLFAVKCIPKKALK-GKESSIENEIAVLRKI---KHENIVA 84
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK-VKELTRQMLKGVDF 148
D+ E +YL+ + V G ++ G K L RQ+L V +
Sbjct: 85 LEDIY-------ESPNHLYLVMQLVSG--GELFDRIVEKGFYTEKDASTLIRQVLDAVYY 135
Query: 149 LHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILL 205
LH I+HRDLKP+NLL + I+DFGL+K ++++ T Y APE+L
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA 195
Query: 206 NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWS 265
Y VD WSIG + L C G P + EN S +
Sbjct: 196 QKPYSKAVDCWSIGVIA------YILLC---------------GYPPF--YDENDSKL-- 230
Query: 266 SFEQYSKVAF---SAIFMDCCSKANSLLESMLTFNPADRISAADALEHPY 312
FEQ K + S + D A + +++ +P R + A HP+
Sbjct: 231 -FEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPW 279
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 47/289 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKL-RVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V+ AR+ K ++ VA+K L + ++ ++G+ REI I L HPNI
Sbjct: 31 LGKGKFGNVYLARE--KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL---HHPNI 85
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEK-CPPPGLSASKVKELTRQMLKG 145
+R + N D R +YLI E+ + +L ++K C + + ++
Sbjct: 86 LRLY-----NYFYDRR--RIYLILEYAPRGELYKELQKSC---TFDEQRTATIMEELADA 135
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILL 205
+ + H ++IHRD+KP+NLL+ G LKIADFG + + ++ TL Y PE++
Sbjct: 136 LMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 206 NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWS 265
+ VD+W IG + E+ P F +++ E + I +V
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV------------------ 236
Query: 266 SFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+ F A + A L+ +L NP++R+ A HP+ +
Sbjct: 237 ------DLKFPA---SVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL E TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKE---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+ ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYAPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NL+I + G +++ DFGLAK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK 124
TL E IL+ ++ P +V+ F + N+ Y+ +F H+ + +G + E
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFXE- 140
Query: 125 CPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD 184
P A+ Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 141 -PHARFYAA-------QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 185 YDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 193 GRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + + GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKH-KESGNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK 124
TL E IL+ ++ P +V+ F + N+ Y+ +F H+ + +G + E
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFXE- 140
Query: 125 CPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD 184
P A+ Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 141 -PHARFYAA-------QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 185 YDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 193 GRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + + GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKH-KESGNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK 124
TL E IL+ ++ P +V+ F + N+ Y+ +F H+ + +G + E
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFXE- 140
Query: 125 CPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD 184
P A+ Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 141 -PHARFYAA-------QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 185 YDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 193 GRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 28/218 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+G G++ T AR+L Y + + + R + E+ +P T RE ++ +LD HP
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLD---HP--- 90
Query: 89 RFFDVIHQNILSDER------YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
FF ++ DE+ Y + +++ + +GS+ E C + T ++
Sbjct: 91 -FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETC---------TRFYTAEI 139
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYR 199
+ +++LH IIHRDLKP+N+L+ ++I DFG AK + V T Y
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTE 237
+PE+L D+W++GC++ ++ +P F A E
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK 124
TL E IL+ ++ P +V+ F + N+ Y+ +F H+ + +G + E
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFAE- 140
Query: 125 CPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD 184
P A+ Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 141 -PHARFYAA-------QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 185 YDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 193 GRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (11%)
Query: 12 LNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR 71
LN + L LG+ QIG G +G VF R L+ VA+K R L D + L+
Sbjct: 111 LNHEDLVLGE-------QIGRGNFGEVFSGR-LRADNTLVAVKSCRETLPPD-LKAKFLQ 161
Query: 72 EISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-- 129
E ILKQ + HPNIVR V Q +Y++ E V G ++ G
Sbjct: 162 EARILKQ---YSHPNIVRLIGVCTQK-------QPIYIVMELVQG--GDFLTFLRTEGAR 209
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
L + ++ G+++L S IHRDL +N L+T LKI+DFG+++ +
Sbjct: 210 LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXA 269
Query: 190 TS---VVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
S V + + APE L Y + D+WS G ++ E + L
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSL 311
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 41/264 (15%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKA------RDLQNKGNYVAMKK 55
YE D D L LG +G GA+G V A +D + VA+K
Sbjct: 22 YELPEDPKWEFPRDKLTLGKP-------LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 56 LRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD 115
L+ E + + E+ ++K + +H NI+ Q+ +Y+I +
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIG--KHKNIINLLGACTQDG-------PLYVIVGYAS 124
Query: 116 Q-DLGSYMEKCPPPGLSAS----KVKE----------LTRQMLKGVDFLHSHRIIHRDLK 160
+ +L Y+ PPG+ S +V E T Q+ +G+++L S + IHRDL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 161 PQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWS 217
+N+L+T +KIADFGLA+ DY T+ + + + APE L + Y D+WS
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 218 IGCVMAEMWRLVPLFCASTEVEQL 241
G +M E++ L VE+L
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 50/301 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQ--NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLD 80
+++ L +G G++G VF + + + AMK L+ + + T E IL +++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKELT 139
HP IV+ +H ++ + +YLI + + DL + + K + VK
Sbjct: 85 ---HPFIVK----LHYAFQTEGK---LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYL 132
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-TFDYDMMLTSVVVTLWY 198
++ +D LHS II+RDLKP+N+L+ G +K+ DFGL+K + D++ S T+ Y
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY 192
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV-IGTPSMNEWP 257
APE++ G+ D WS G +M EM F E + I + +G P
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF---- 248
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAA-DALE----HPY 312
+A SLL + NPA+R+ A D +E H +
Sbjct: 249 ------------------------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
Query: 313 F 313
F
Sbjct: 285 F 285
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 29 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 80
Query: 67 MSTLREISILKQLDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK 124
TL E IL+ ++ P +V+ F + N+ Y+ +F H+ + +G + E
Sbjct: 81 EHTLNEKRILQAVN---FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFXE- 135
Query: 125 CPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD 184
P A+ Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 -PHARFYAA-------QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 187
Query: 185 YDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 188 GRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 50/301 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQ--NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLD 80
+++ L +G G++G VF + + + AMK L+ + + T E IL +++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKELT 139
HP IV+ +H ++ + +YLI + + DL + + K + VK
Sbjct: 86 ---HPFIVK----LHYAFQTEGK---LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYL 133
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-TFDYDMMLTSVVVTLWY 198
++ +D LHS II+RDLKP+N+L+ G +K+ DFGL+K + D++ S T+ Y
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY 193
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV-IGTPSMNEWP 257
APE++ G+ D WS G +M EM F E + I + +G P
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF---- 249
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAA-DALE----HPY 312
+A SLL + NPA+R+ A D +E H +
Sbjct: 250 ------------------------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 285
Query: 313 F 313
F
Sbjct: 286 F 286
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 50/301 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQ--NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLD 80
+++ L +G G++G VF + + + AMK L+ + + T E IL +++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 81 TFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKELT 139
HP IV+ +H ++ + +YLI + + DL + + K + VK
Sbjct: 85 ---HPFIVK----LHYAFQTEGK---LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYL 132
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-TFDYDMMLTSVVVTLWY 198
++ +D LHS II+RDLKP+N+L+ G +K+ DFGL+K + D++ S T+ Y
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY 192
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV-IGTPSMNEWP 257
APE++ G+ D WS G +M EM F E + I + +G P
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF---- 248
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAA-DALE----HPY 312
+A SLL + NPA+R+ A D +E H +
Sbjct: 249 ------------------------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
Query: 313 F 313
F
Sbjct: 285 F 285
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 49/299 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
+YD + IG G +G RD K VA+K + I + REI + L
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYIE---RGAAIDENVQREIINHRSL--- 73
Query: 83 EHPNIVRFFDVI----HQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HPNIVRF +VI H I+ + Y + ++E + C S + +
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIME--YASGGELYERI----------CNAGRFSEDEARFF 121
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI--TRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
+Q+L GV + HS +I HRDLK +N L+ + A LKI DFG +K+ S V T
Sbjct: 122 FQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 181
Query: 197 WYRAPEILLNLGY-GTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPSMN 254
Y APE+LL Y G D+WS G + M P + K I R++
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV---- 237
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
+YS I +CC L+ + +PA RIS + H +F
Sbjct: 238 --------------KYSIPDDIRISPECC----HLISRIFVADPATRISIPEIKTHSWF 278
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + + GN+ AMK L VKL +
Sbjct: 55 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKH-KESGNHYAMKILDKQKVVKLKQ---I 106
Query: 67 MSTLREISILKQLDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEK 124
TL E IL+ ++ P +V+ F + N+ Y+ +F H+ + +G + E
Sbjct: 107 EHTLNEKRILQAVN---FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFXE- 161
Query: 125 CPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD 184
P A+ Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 162 -PHARFYAA-------QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
Query: 185 YDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 214 GRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (11%)
Query: 12 LNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR 71
LN + L LG+ QIG G +G VF R L+ VA+K R L D + L+
Sbjct: 111 LNHEDLVLGE-------QIGRGNFGEVFSGR-LRADNTLVAVKSCRETLPPD-LKAKFLQ 161
Query: 72 EISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-- 129
E ILKQ + HPNIVR V Q +Y++ E V G ++ G
Sbjct: 162 EARILKQ---YSHPNIVRLIGVCTQK-------QPIYIVMELVQG--GDFLTFLRTEGAR 209
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
L + ++ G+++L S IHRDL +N L+T LKI+DFG+++ +
Sbjct: 210 LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269
Query: 190 TS---VVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
S V + + APE L Y + D+WS G ++ E + L
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSL 311
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + + GN+ AMK L VKL +
Sbjct: 21 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKH-KESGNHYAMKILDKQKVVKLKQ---I 72
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 73 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 122
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI G +++ DFG AK
Sbjct: 123 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG 180
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 181 RTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 232
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 99 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 146
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 204
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 28/186 (15%)
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L+ + + RQ++ G +LH +R+IHRDLK NL + +KI DFGLA +YD
Sbjct: 135 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 194
Query: 189 LTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
V+ T Y APE+L G+ VD+WSIGC+M + +
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL---------------------L 233
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
+G P P S + ++ + K +S I A SL++ ML +P R + +
Sbjct: 234 VGKP-----PFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINEL 287
Query: 308 LEHPYF 313
L +F
Sbjct: 288 LNDEFF 293
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 28/186 (15%)
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L+ + + RQ++ G +LH +R+IHRDLK NL + +KI DFGLA +YD
Sbjct: 111 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170
Query: 189 LTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
V+ T Y APE+L G+ VD+WSIGC+M + +
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL---------------------L 209
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
+G P P S + ++ + K +S I A SL++ ML +P R + +
Sbjct: 210 VGKP-----PFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINEL 263
Query: 308 LEHPYF 313
L +F
Sbjct: 264 LNDEFF 269
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 14/219 (6%)
Query: 26 ELCQI-GCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
EL +I G G V ARDL++ + VA+K LR L D P LR + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRD-VAVKVLRADLARD--PSFYLRFRREAQNAAALNH 71
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P IV +D + Y++ E+VD L + P ++ + E+
Sbjct: 72 PAIVAVYDTGEAETPAGP---LPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYDMMLTSVVVTLWYR 199
+ ++F H + IIHRD+KP N+LI+ +K+ DFG+A+ + +V+ T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
+PE D++S+GCV+ E+ P F + V
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 28/186 (15%)
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L+ + + RQ++ G +LH +R+IHRDLK NL + +KI DFGLA +YD
Sbjct: 137 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196
Query: 189 LTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
V+ T Y APE+L G+ VD+WSIGC+M + +
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL---------------------L 235
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
+G P P S + ++ + K +S I A SL++ ML +P R + +
Sbjct: 236 VGKP-----PFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINEL 289
Query: 308 LEHPYF 313
L +F
Sbjct: 290 LNDEFF 295
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 130/312 (41%), Gaps = 47/312 (15%)
Query: 9 IQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMS 68
+Q L+ +S+ D Y+ IG G+Y R + N K+ K D
Sbjct: 10 VQQLHRNSIQFTDG-YEVKEDIGVGSYSVC--KRCIHKATNMEFAVKIIDKSKRD----- 61
Query: 69 TLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKC-PP 127
EI IL L +HPNI+ DV D +Y VY++ E + G ++K
Sbjct: 62 PTEEIEIL--LRYGQHPNIITLKDV-----YDDGKY--VYVVTELMKG--GELLDKILRQ 110
Query: 128 PGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGG----LKIADFGLAKTF 183
S + + + K V++LH+ ++HRDLKP N+L G ++I DFG AK
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 184 DYDM-MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLK 242
+ +L + T + APE+L GY DIWS+G ++ M F +
Sbjct: 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD----- 225
Query: 243 CIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCS-KANSLLESMLTFNPADR 301
+ PE I S K + S + + S A L+ ML +P R
Sbjct: 226 ------------DTPEEILARIGS----GKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQR 269
Query: 302 ISAADALEHPYF 313
++AA L HP+
Sbjct: 270 LTAALVLRHPWI 281
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 113/255 (44%), Gaps = 37/255 (14%)
Query: 72 EISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLS 131
EI IL L +HPNI+ DV D ++ VYL+ E + G ++K
Sbjct: 70 EIEIL--LRYGQHPNIITLKDV-----YDDGKH--VYLVTELMRG--GELLDKILRQKFF 118
Query: 132 ASKVKELTRQML-KGVDFLHSHRIIHRDLKPQNLLITRAGG----LKIADFGLAKTFDYD 186
+ + + K V++LHS ++HRDLKP N+L G L+I DFG AK +
Sbjct: 119 SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
Query: 187 M-MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIF 245
+L + T + APE+L GY DIWS+G ++ M F A+ + + I
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEIL 237
Query: 246 RVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAA 305
IG+ N W++ + +K L+ ML +P R++A
Sbjct: 238 TRIGSGKFTLSGGN----WNTVSETAK---------------DLVSKMLHVDPHQRLTAK 278
Query: 306 DALEHPYFKEKENEP 320
L+HP+ +K+ P
Sbjct: 279 QVLQHPWVTQKDKLP 293
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 111/256 (43%), Gaps = 39/256 (15%)
Query: 72 EISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLS 131
EI IL L +HPNI+ DV D ++ VYL+ E + G ++K
Sbjct: 70 EIEIL--LRYGQHPNIITLKDV-----YDDGKH--VYLVTELMRG--GELLDKILRQKFF 118
Query: 132 ASKVKELTRQML-KGVDFLHSHRIIHRDLKPQNLLITRAGG----LKIADFGLAKTFDYD 186
+ + + K V++LHS ++HRDLKP N+L G L+I DFG AK +
Sbjct: 119 SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
Query: 187 -MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIF 245
+L + T + APE+L GY DIWS+G ++ M F
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANG---------- 228
Query: 246 RVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISA 304
PS + PE I S K S + S+ A L+ ML +P R++A
Sbjct: 229 -----PS--DTPEEILTRIGS----GKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTA 277
Query: 305 ADALEHPYFKEKENEP 320
L+HP+ +K+ P
Sbjct: 278 KQVLQHPWVTQKDKLP 293
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
++ F + F + N+ Y +F H+ + +G + E P A+
Sbjct: 99 VN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-IGRFXE--PHARFYAA----- 149
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
Q++ ++LHS +I+RDLKP+NL+I + G +K+ DFG AK + T Y
Sbjct: 150 --QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEY 205
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+L+ GY VD W++G ++ +M P F A ++
Sbjct: 194 RTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQ 245
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+ ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYAPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NL+I + G +K+ DFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 42/294 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
YD ++G GA+G V + + N+ A + ++ ++ +S+L+
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR------ 106
Query: 84 HPNIVRFFDVIHQN--ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
HP +V D + ++ +++ +FE V + +S + E RQ
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---------MSEDEAVEYMRQ 157
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLIT--RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYR 199
+ KG+ +H + +H DLKP+N++ T R+ LK+ DFGL D + T +
Sbjct: 158 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA 217
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
APE+ G D+WS+G + + + F + E L+ +
Sbjct: 218 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV--------------- 262
Query: 260 ISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
S W+ AFS I D + +L +P R++ ALEHP+
Sbjct: 263 KSCDWN----MDDSAFSGISED----GKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
++ F + F + N+ Y +F H+ + +G + E P A+
Sbjct: 99 VN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-IGRFSE--PHARFYAA----- 149
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
Q++ ++LHS +I+RDLKP+NL+I + G +K+ DFG AK + T Y
Sbjct: 150 --QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEY 205
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 25/223 (11%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
++ P +V+ F + N+ Y+ +F H+ + +G + E P A+
Sbjct: 99 VN---FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-IGRFXE--PHARFYAA--- 149
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 150 ----QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTP 203
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 66/264 (25%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
DL + +Y + ++G G + TV+ + D+Q K +VAMK ++ + + + L EI +LK
Sbjct: 17 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGK-KFVAMKVVK---SAEHYTETALDEIRLLK 72
Query: 78 QLDTFE--HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
+ + PN ++ +S + ++FE + L ++ K GL V
Sbjct: 73 SVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCV 132
Query: 136 KELTRQMLKGVDFLHSH-RIIHRDLKPQNLLIT-----------------RAGG------ 171
K++ +Q+L+G+D+LH+ RIIH D+KP+N+L++ R+G
Sbjct: 133 KKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGS 192
Query: 172 --------------------------LKIADFGLA----KTFDYDMMLTSVVVTLWYRAP 201
+KIAD G A K F D+ T YR+
Sbjct: 193 AVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQ------TRQYRSL 246
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E+L+ GY TP DIWS C+ E+
Sbjct: 247 EVLIGSGYNTPADIWSTACMAFEL 270
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 121/294 (41%), Gaps = 42/294 (14%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
YD ++G GA+G V + + N+ A + ++ ++ +S+L+
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR------ 212
Query: 84 HPNIVRFFDVIHQN--ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
HP +V D + ++ +++ +FE V + +S + E RQ
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---------MSEDEAVEYMRQ 263
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLIT--RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYR 199
+ KG+ +H + +H DLKP+N++ T R+ LK+ DFGL D + T +
Sbjct: 264 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA 323
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
APE+ G D+WS+G + + + F + E L+ +
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV--------------- 368
Query: 260 ISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
S W+ + AFS I D + +L +P R++ ALEHP+
Sbjct: 369 KSCDWNMDDS----AFSGISED----GKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
++ F + F + N+ Y +F H+ + +G + E P A+
Sbjct: 99 VN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-IGRFSE--PHARFYAA----- 149
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWY 198
Q++ ++LHS +I+RDLKP+NL+I + G +K+ DFG AK + T Y
Sbjct: 150 --QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEY 205
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 25/223 (11%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
++ P +V+ F + N+ Y+ +F H+ + +G + E P A+
Sbjct: 98 VN---FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-IGRFXE--PHARFYAA--- 148
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 149 ----QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTP 202
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 26 ELCQI-GCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
EL +I G G V ARDL++ + VA+K LR L D P LR + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRD-VAVKVLRADLARD--PSFYLRFRREAQNAAALNH 71
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P IV +D + Y++ E+VD L + P ++ + E+
Sbjct: 72 PAIVAVYDTGEAETPAGP---LPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLT---SVVVTLWYR 199
+ ++F H + IIHRD+KP N++I+ +K+ DFG+A+ D +T +V+ T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
+PE D++S+GCV+ E+ P F + V
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 66/264 (25%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
DL + +Y + ++G G + TV+ + D+Q K +VAMK ++ + + + L EI +LK
Sbjct: 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGK-KFVAMKVVK---SAEHYTETALDEIRLLK 88
Query: 78 QLDTFE--HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
+ + PN ++ +S + ++FE + L ++ K GL V
Sbjct: 89 SVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCV 148
Query: 136 KELTRQMLKGVDFLHSH-RIIHRDLKPQNLLIT-----------------RAGG------ 171
K++ +Q+L+G+D+LH+ RIIH D+KP+N+L++ R+G
Sbjct: 149 KKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGS 208
Query: 172 --------------------------LKIADFGLA----KTFDYDMMLTSVVVTLWYRAP 201
+KIAD G A K F D+ T YR+
Sbjct: 209 AVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQ------TRQYRSL 262
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E+L+ GY TP DIWS C+ E+
Sbjct: 263 EVLIGSGYNTPADIWSTACMAFEL 286
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 25/223 (11%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
++ P +V+ F + N+ Y+ +F H+ + +G + E P A+
Sbjct: 98 VN---FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-IGRFXE--PHARFYAA--- 148
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 149 ----QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTP 202
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 28/176 (15%)
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEIL 204
G++ LH RI++RDLKP+N+L+ G ++I+D GLA + V T+ Y APE++
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
N Y D W++GC++ EM + S ++ K I R + E PE S +
Sbjct: 358 KNERYTFSPDWWALGCLLYEM-----IAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF 412
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRI-----SAADALEHPYFKE 315
S +A SL +L +PA+R+ SA + EHP FK+
Sbjct: 413 S------------------PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 28/176 (15%)
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEIL 204
G++ LH RI++RDLKP+N+L+ G ++I+D GLA + V T+ Y APE++
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
N Y D W++GC++ EM + S ++ K I R + E PE S +
Sbjct: 358 KNERYTFSPDWWALGCLLYEM-----IAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF 412
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRI-----SAADALEHPYFKE 315
S +A SL +L +PA+R+ SA + EHP FK+
Sbjct: 413 S------------------PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NL+I + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y APEI+++ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTW--XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 25/223 (11%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
++ P +V+ F + N+ Y +F H+ + +G + E P A+
Sbjct: 98 VN---FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-IGRFXE--PHARFYAA--- 148
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
Q++ ++LHS +I+RDLKP+NL+I + G +K+ DFG AK + T
Sbjct: 149 ----QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTP 202
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKH-KETGNHFAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEYSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKH-KETGNHFAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEYSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKH-KETGNHFAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEYSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 35 QFERIKTLGTGSFGRVMLVKH-KETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 90
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 91 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 138
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 196
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKH-KETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 99 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 146
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 204
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKH-KETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 99 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 146
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 204
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 136/315 (43%), Gaps = 56/315 (17%)
Query: 20 GDKKYDELCQ-------IGCGAYGTVFKARDLQNKGNYVAMKKL-RVKLNEDGIPMSTLR 71
G K YDEL + IG G + V A + G VA+K + + L D + T
Sbjct: 1 GPKDYDELLKYYELHETIGTGGFAKVKLACHILT-GEMVAIKIMDKNTLGSDLPRIKT-- 57
Query: 72 EISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGL 130
EI LK L H +I + + V+ E ++++ E+ +L Y+ L
Sbjct: 58 EIEALKNL---RHQHICQLYHVL-------ETANKIFMVLEYCPGGELFDYI--ISQDRL 105
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMM 188
S + + + RQ++ V ++HS HRDLKP+NLL LK+ DFGL + D
Sbjct: 106 SEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165
Query: 189 LTSVVVTLWYRAPEILLNLGY-GTPVDIWSIGCVM-AEMWRLVPLFCASTEVEQLKCIFR 246
L + +L Y APE++ Y G+ D+WS+G ++ M +P F + K I R
Sbjct: 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP-FDDDNVMALYKKIMR 224
Query: 247 VIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
G + +W S++ LL+ ML +P RIS +
Sbjct: 225 --GKYDVPKWLSPSSIL-------------------------LLQQMLQVDPKKRISMKN 257
Query: 307 ALEHPYFKEKENEPL 321
L HP+ + N P+
Sbjct: 258 LLNHPWIMQDYNYPV 272
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 63 QFERIKTLGTGSFGRVMLVKH-KETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 118
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 119 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 166
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 224
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKH-KETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+V ++ S++ + S +
Sbjct: 99 VN---FPFLVKLEFSFKDNS-------NLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF 146
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 204
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY 185
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+ T Y AP I+L+ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTW--XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L+ + + RQ++ G +LH +R+IHRDLK NL + +KI DFGLA +YD
Sbjct: 113 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 172
Query: 189 LTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
+ T Y APE+L G+ VD+WSIGC+M + +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL---------------------L 211
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
+G P P S + ++ + K +S I A SL++ ML +P R + +
Sbjct: 212 VGKP-----PFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINEL 265
Query: 308 LEHPYF 313
L +F
Sbjct: 266 LNDEFF 271
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 138/321 (42%), Gaps = 55/321 (17%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
++L S+ + + Y L QIG G VF+ L K A+K + ++ ++ S
Sbjct: 16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSY 73
Query: 70 LREISILKQLDTFEHPN-IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
EI+ L +L +H + I+R +D ++D+ +Y++ E + DL S+++K
Sbjct: 74 RNEIAYLNKLQ--QHSDKIIRLYDYE----ITDQY---IYMVMECGNIDLNSWLKK--KK 122
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-- 186
+ + K + ML+ V +H H I+H DLKP N LI G LK+ DFG+A D
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 181
Query: 187 -MMLTSVVVTLWYRAPEILLNLGYG-----------TPVDIWSIGCVMAEM-WRLVPLFC 233
++ S V T+ Y PE + ++ D+WS+GC++ M + P
Sbjct: 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
Query: 234 ASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESM 293
++ +L I + PE + V + CC
Sbjct: 242 IINQISKLHAIIDPNHEIEFPDIPE---------KDLQDV------LKCC---------- 276
Query: 294 LTFNPADRISAADALEHPYFK 314
L +P RIS + L HPY +
Sbjct: 277 LKRDPKQRISIPELLAHPYVQ 297
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L+ + + RQ++ G +LH +R+IHRDLK NL + +KI DFGLA +YD
Sbjct: 113 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 172
Query: 189 LTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
+ T Y APE+L G+ VD+WSIGC+M + +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL---------------------L 211
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
+G P P S + ++ + K +S I A SL++ ML +P R + +
Sbjct: 212 VGKP-----PFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINEL 265
Query: 308 LEHPYF 313
L +F
Sbjct: 266 LNDEFF 271
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 23/207 (11%)
Query: 27 LCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDT---FE 83
L ++G G +G V G + + VK+ ++G ++ E ++ T
Sbjct: 13 LKELGSGQFGVV-------KLGKWKGQYDVAVKMIKEG----SMSEDEFFQEAQTMMKLS 61
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
HP +V+F+ V + +Y++ E++ + GL S++ E+ +
Sbjct: 62 HPKLVKFYGVCSKE-------YPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVC 114
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVT--LWYRAP 201
+G+ FL SH+ IHRDL +N L+ R +K++DFG+ + D ++SV + + AP
Sbjct: 115 EGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAP 174
Query: 202 EILLNLGYGTPVDIWSIGCVMAEMWRL 228
E+ Y + D+W+ G +M E++ L
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSL 201
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+++LG+ + + G + V++A+D+ G A+K+L NE+ + ++E+
Sbjct: 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDV-GSGREYALKRLLS--NEEEKNRAIIQEVC 77
Query: 75 ILKQLDTFEHPNIVRFFDVIH-QNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG-LSA 132
+K+L HPNIV+F SD L+ E L +++K G LS
Sbjct: 78 FMKKLSG--HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC 135
Query: 133 SKVKELTRQMLKGVDFLHSHR--IIHRDLKPQNLLITRAGGLKIADFGLAKT------FD 184
V ++ Q + V +H + IIHRDLK +NLL++ G +K+ DFG A T +
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS 195
Query: 185 YDMMLTSVV-------VTLWYRAPEIL---LNLGYGTPVDIWSIGCVM 222
+ ++V T YR PEI+ N G DIW++GC++
Sbjct: 196 WSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L+ + + RQ++ G +LH +R+IHRDLK NL + +KI DFGLA +YD
Sbjct: 117 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 176
Query: 189 LTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
+ T Y APE+L G+ VD+WSIGC+M + +
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL---------------------L 215
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
+G P P S + ++ + K +S I A SL++ ML +P R + +
Sbjct: 216 VGKP-----PFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINEL 269
Query: 308 LEHPYF 313
L +F
Sbjct: 270 LNDEFF 275
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 135/320 (42%), Gaps = 53/320 (16%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
++L S+ + + Y L QIG G VF+ L K A+K + ++ ++ S
Sbjct: 16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSY 73
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG 129
EI+ L +L I+R +D ++D+ +Y++ E + DL S+++K
Sbjct: 74 RNEIAYLNKLQQHSD-KIIRLYDYE----ITDQ---YIYMVMECGNIDLNSWLKK--KKS 123
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD--- 186
+ + K + ML+ V +H H I+H DLKP N LI G LK+ DFG+A D
Sbjct: 124 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDXXX 182
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTP-----------VDIWSIGCVMAEM-WRLVPLFCA 234
++ S V T+ Y PE + ++ D+WS+GC++ M + P
Sbjct: 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242
Query: 235 STEVEQLKCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESML 294
++ +L I + PE + V + CC L
Sbjct: 243 INQISKLHAIIDPNHEIEFPDIPE---------KDLQDV------LKCC----------L 277
Query: 295 TFNPADRISAADALEHPYFK 314
+P RIS + L HPY +
Sbjct: 278 KRDPKQRISIPELLAHPYVQ 297
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 127/299 (42%), Gaps = 49/299 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
+Y+ + IG G +G RD Q+ VA+K + + I + REI + L
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIE---RGEKIDENVKREIINHRSL--- 72
Query: 83 EHPNIVRFFDVI----HQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HPNIVRF +VI H I+ + Y + +FE + C S + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVME--YASGGELFERI----------CNAGRFSEDEARFF 120
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI--TRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
+Q++ GV + H+ ++ HRDLK +N L+ + A LKI FG +K+ S V T
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTP 180
Query: 197 WYRAPEILLNLGY-GTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL-KCIFRVIGTPSMN 254
Y APE+LL Y G D+WS G + M F E + K I R++
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV---- 236
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
QY+ + I +C L+ + +PA RIS + H +F
Sbjct: 237 --------------QYAIPDYVHISPEC----RHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 26 ELCQI-GCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
EL +I G G V ARDL++ + VA+K LR L D P LR + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRD-VAVKVLRADLARD--PSFYLRFRREAQNAAALNH 71
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P IV +D + Y++ E+VD L + P ++ + E+
Sbjct: 72 PAIVAVYDTGEAETPAGP---LPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLT---SVVVTLWYR 199
+ ++F H + IIHRD+KP N++I+ +K+ DFG+A+ D +T +V+ T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCAST 236
+PE D++S+GCV+ E+ P F +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + ++ GN+ AMK L VKL + TL E IL+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 97
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+ ++ S++ + S +
Sbjct: 98 VN---FPFLVKLEFSFKDNS-------NLYMVMEYAPGGEMFSHLRRIGR--FSEPHARF 145
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NL+I + G +++ DFG AK + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPE 203
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
++E+ +G GA+G V KAR+ + Y A+KK+R E+ + + L E+ +L L+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALD-SRYYAIKKIR--HTEEKLS-TILSEVXLLASLN--- 60
Query: 84 HPNIVRFFD--VIHQNILSD----ERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE 137
H +VR++ + +N + ++ T+++ E+ + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM---------- 187
L RQ+L+ + ++HS IIHR+LKP N+ I + +KI DFGLAK +
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 188 -----MLTSVVVTLWYRAPEILLNLG-YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL 241
LTS + T Y A E+L G Y +D +S+G + E + P V L
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEX--IYPFSTGXERVNIL 238
Query: 242 KCIFRV 247
K + V
Sbjct: 239 KKLRSV 244
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E I +
Sbjct: 43 QFERIRTLGTGSFGRVMLVKH-KETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRIQQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+ ++ S++ + S +
Sbjct: 99 VN---FPFLVKLEFSFKDNS-------NLYMVLEYAPGGEMFSHLRRIGR--FSEPHARF 146
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NLLI + G +K+ADFG AK + T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW--XLCGTPE 204
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 25/223 (11%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 35 QFERIKTLGTGSFGRVMLVKH-KETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 90
Query: 79 LDTFEHPNIVR--FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
++ P +V+ F + N+ Y+ +F H+ + +G + E P A+
Sbjct: 91 VN---FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-IGRFXE--PHARFYAA--- 141
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK + T
Sbjct: 142 ----QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTP 195
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIPMSTLREISILKQ 78
+++ + +G G++G V + + GN+ AMK L VKL + TL E IL+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKH-KETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQA 98
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKCPPPGLSASKVKE 137
++ P +V+ N +Y++ E+ ++ S++ + S +
Sbjct: 99 VN---FPFLVKLEFSFKDNS-------NLYMVMEYAPGGEMFSHLRRIGR--FSEPHARF 146
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
Q++ ++LHS +I+RDLKP+NL+I + G +K+ DFG AK + T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPE 204
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
Y APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR----VKLNEDGIP 66
S N LD ++D + +G G++G V + ++ GN+ AMK L VKL +
Sbjct: 34 SQNTAQLD----QFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQ---I 85
Query: 67 MSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYMEKC 125
TL E IL+ ++ P +V+ N +Y++ E+V ++ S++ +
Sbjct: 86 EHTLNEKRILQAVN---FPFLVKLEFSFKDNS-------NLYMVMEYVAGGEMFSHLRRI 135
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD- 184
S + Q++ ++LHS +I+RDLKP+NLLI + G +++ DFG AK
Sbjct: 136 GR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 185 YDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
L L APEI+L+ GY VD W++G ++ EM P F A ++
Sbjct: 194 RTWXLCGTPEAL---APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVA--MKKLRVKLN---EDGIPMSTLREISIL 76
+KY + +G GA+G V+ A D + V +KK +V + ED EI+IL
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
++ EH NI++ D I ++ + + + DL +++++ P L
Sbjct: 84 SRV---EHANIIKVLD-----IFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLAS 133
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
+ RQ++ V +L IIHRD+K +N++I +K+ DFG A + + + T+
Sbjct: 134 YIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTI 193
Query: 197 WYRAPEILLNLGYGTP-VDIWSIGCVM 222
Y APE+L+ Y P +++WS+G +
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTL 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 142/347 (40%), Gaps = 71/347 (20%)
Query: 1 MYEYSADTIQSLNLDSLDLG----DKK--------------YDELCQIGCGAYGTVFKAR 42
M E +A + ++DS DLG DK Y L QIG G VF+
Sbjct: 17 MKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQV- 75
Query: 43 DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDE 102
L K A+K + ++ ++ S EI+ L +L I+R +D ++D+
Sbjct: 76 -LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD-KIIRLYDYE----ITDQ 129
Query: 103 RYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQ 162
+Y++ E + DL S+++K + + K + ML+ V +H H I+H DLKP
Sbjct: 130 ---YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 163 NLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYRAPEILLNLGYG--------- 210
N LI G LK+ DFG+A D ++ S V T+ Y PE + ++
Sbjct: 185 NFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 211 --TPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
D+WS+GC++ M + P ++ +L I + PE
Sbjct: 244 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE--------- 294
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+ V + CC L +P RIS + L HPY +
Sbjct: 295 KDLQDV------LKCC----------LKRDPKQRISIPELLAHPYVQ 325
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 142/347 (40%), Gaps = 71/347 (20%)
Query: 1 MYEYSADTIQSLNLDSLDLG----DKK--------------YDELCQIGCGAYGTVFKAR 42
M E +A + ++DS DLG DK Y L QIG G VF+
Sbjct: 17 MKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQV- 75
Query: 43 DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDE 102
L K A+K + ++ ++ S EI+ L +L I+R +D ++D+
Sbjct: 76 -LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD-KIIRLYDYE----ITDQ 129
Query: 103 RYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQ 162
+Y++ E + DL S+++K + + K + ML+ V +H H I+H DLKP
Sbjct: 130 ---YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 163 NLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYRAPEILLNLGYG--------- 210
N LI G LK+ DFG+A D ++ S V T+ Y PE + ++
Sbjct: 185 NFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 211 --TPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
D+WS+GC++ M + P ++ +L I + PE
Sbjct: 244 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE--------- 294
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+ V + CC L +P RIS + L HPY +
Sbjct: 295 KDLQDV------LKCC----------LKRDPKQRISIPELLAHPYVQ 325
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 29/216 (13%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN-EDGIPMSTLREISIL 76
+L D ++ + ++G G G V K +Q++ + + M + + L + I +RE+ +L
Sbjct: 12 ELKDDDFERISELGAGNGGVVTK---VQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL 68
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK-- 134
+ ++ P IV F+ + + + + EH+D G +++ L +K
Sbjct: 69 HECNS---PYIVGFYGAFYSD-------GEISICMEHMD---GGSLDQV----LKEAKRI 111
Query: 135 ----VKELTRQMLKGVDFLH-SHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
+ +++ +L+G+ +L H+I+HRD+KP N+L+ G +K+ DFG++ D M
Sbjct: 112 PEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMA 170
Query: 190 TSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
S V T Y APE L Y DIWS+G + E+
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVEL 206
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 26 ELCQI-GCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
EL +I G G V ARDL+ + VA+K LR L D P LR + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRLHRD-VAVKVLRADLARD--PSFYLRFRREAQNAAALNH 71
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P IV +D + Y++ E+VD L + P ++ + E+
Sbjct: 72 PAIVAVYDTGEAETPAGP---LPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLT---SVVVTLWYR 199
+ ++F H + IIHRD+KP N++I+ +K+ DFG+A+ D +T +V+ T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
+PE D++S+GCV+ E+ P F + V
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IV DV ++N+ +R L + I E ++ +L S +++ + + E+ R +
Sbjct: 63 PHIVCILDV-YENMHHGKRCLLI--IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 119
Query: 144 KGVDFLHSHRIIHRDLKPQNLLIT---RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ FLHSH I HRD+KP+NLL T + LK+ DFG AK + + T T +Y A
Sbjct: 120 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP-CYTPYYVA 178
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
PE+L Y D+WS+G +M + P F ++T + I +P M I
Sbjct: 179 PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAI-SPGMK---RRI 226
Query: 261 SLMWSSF--EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
L F ++S+V+ A L+ +L +P +R++ + HP+ +
Sbjct: 227 RLGQYGFPNPEWSEVS---------EDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 274
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 144/346 (41%), Gaps = 87/346 (25%)
Query: 22 KKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI----PMSTLREISILK 77
KKY IG G+YG V A + Q + A++ +++ +N++ I P R + ++
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTR----AIRAIKI-MNKNKIRQINPKDVERIKTEVR 80
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEH-----------VDQDLGS------ 120
+ HPNI R ++V DE+Y+ + + H +D G
Sbjct: 81 LMKKLHHPNIARLYEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135
Query: 121 YMEKCPPPGLSASKVK--------------------ELTRQMLKGVDFLHSHRIIHRDLK 160
+ CP P + + + RQ+ + +LH+ I HRD+K
Sbjct: 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIK 195
Query: 161 PQNLLIT--RAGGLKIADFGLAKTF------DYDMMLTSVVVTLWYRAPEIL--LNLGYG 210
P+N L + ++ +K+ DFGL+K F +Y M T+ T ++ APE+L N YG
Sbjct: 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM-TTKAGTPYFVAPEVLNTTNESYG 254
Query: 211 TPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSFEQY 270
D WS G ++ + + + P +N+ + IS + +
Sbjct: 255 PKCDAWSAGVLLHLL------------------LMGAVPFPGVND-ADTISQVLN----- 290
Query: 271 SKVAFSAIFMDCCSK-ANSLLESMLTFNPADRISAADALEHPYFKE 315
K+ F + S A LL ++L N +R A AL+HP+ +
Sbjct: 291 KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IV DV ++N+ +R L + I E ++ +L S +++ + + E+ R +
Sbjct: 82 PHIVCILDV-YENMHHGKRCLLI--IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 138
Query: 144 KGVDFLHSHRIIHRDLKPQNLLIT---RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ FLHSH I HRD+KP+NLL T + LK+ DFG AK + + T T +Y A
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP-CYTPYYVA 197
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
PE+L Y D+WS+G +M + P F ++T + I +P M I
Sbjct: 198 PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAI-SPGMK---RRI 245
Query: 261 SLMWSSF--EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKE 315
L F ++S+V+ A L+ +L +P +R++ + HP+ +
Sbjct: 246 RLGQYGFPNPEWSEVS---------EDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 33/290 (11%)
Query: 30 IGCGAYGTVFKAR---DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G G +G V R + N G VA+K L+ + + I +EI IL+ L H N
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI-ADLKKEIEILRNL---YHEN 72
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR--QMLK 144
IV++ + I +++ + LI E + GS E P + ++L Q+ K
Sbjct: 73 IVKY-----KGICTEDGGNGIKLIMEFLPS--GSLKEYLPKNKNKINLKQQLKYAVQICK 125
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWYR 199
G+D+L S + +HRDL +N+L+ +KI DFGL K + D +V WY
Sbjct: 126 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY- 184
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
APE L+ + D+WS G + E+ +C S + + ++IG P+ +
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELL----TYCDS-DSSPMALFLKMIG-PTHGQM--T 236
Query: 260 ISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALE 309
++ + ++ ++ ++ +C + L+ F P++R S + +E
Sbjct: 237 VTRLVNTLKEGKRLPCPP---NCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 26 ELCQI-GCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
EL +I G G V ARDL+ + VA+K LR L D P LR + H
Sbjct: 32 ELGEILGFGGMSEVHLARDLRLHRD-VAVKVLRADLARD--PSFYLRFRREAQNAAALNH 88
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P IV +D + Y++ E+VD L + P ++ + E+
Sbjct: 89 PAIVAVYDTGEAETPAGP---LPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 143
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLT---SVVVTLWYR 199
+ ++F H + IIHRD+KP N++I+ +K+ DFG+A+ D +T +V+ T Y
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
+PE D++S+GCV+ E+ P F + V
Sbjct: 204 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 47/296 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+IG G++ TV+K D + VA +L+ + E LK L +HPNIV
Sbjct: 33 EIGRGSFKTVYKGLDTETTVE-VAWCELQDRKLTKSERQRFKEEAEXLKGL---QHPNIV 88
Query: 89 RFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELT---RQMLK 144
RF+D + + + L+ E L +Y+++ K+K L RQ+LK
Sbjct: 89 RFYDSWESTVKGKK---CIVLVTELXTSGTLKTYLKR-----FKVXKIKVLRSWCRQILK 140
Query: 145 GVDFLHSHR--IIHRDLKPQNLLITR-AGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP 201
G+ FLH+ IIHRDLK N+ IT G +KI D GLA T +V+ T + AP
Sbjct: 141 GLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAP 199
Query: 202 EILLNLGYGTPVDIWSIG-CVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
E Y VD+++ G C + P +E + I+R + +
Sbjct: 200 E-XYEEKYDESVDVYAFGXCXLEXATSEYPY----SECQNAAQIYRRVTS---------- 244
Query: 261 SLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEK 316
+ +SF+ KVA + ++E + N +R S D L H +F+E+
Sbjct: 245 GVKPASFD---KVAIPEV--------KEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 33/290 (11%)
Query: 30 IGCGAYGTVFKAR---DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G G +G V R + N G VA+K L+ + + I +EI IL+ L H N
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI-ADLKKEIEILRNL---YHEN 84
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR--QMLK 144
IV++ + I +++ + LI E + GS E P + ++L Q+ K
Sbjct: 85 IVKY-----KGICTEDGGNGIKLIMEFLPS--GSLKEYLPKNKNKINLKQQLKYAVQICK 137
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWYR 199
G+D+L S + +HRDL +N+L+ +KI DFGL K + D +V WY
Sbjct: 138 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY- 196
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPEN 259
APE L+ + D+WS G + E+ +C S + + ++IG P+ +
Sbjct: 197 APECLMQSKFYIASDVWSFGVTLHELL----TYCDS-DSSPMALFLKMIG-PTHGQM--T 248
Query: 260 ISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALE 309
++ + ++ ++ ++ +C + L+ F P++R S + +E
Sbjct: 249 VTRLVNTLKEGKRLPCPP---NCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 126/299 (42%), Gaps = 49/299 (16%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF 82
+Y+ + IG G +G RD Q+ VA+K + + I + REI + L
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIE---RGEKIDENVKREIINHRSL--- 72
Query: 83 EHPNIVRFFDVI----HQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HPNIVRF +VI H I+ + Y + +FE + C S + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVME--YASGGELFERI----------CNAGRFSEDEARFF 120
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLI--TRAGGLKIADFGLAKTFDYDMMLTSVVVTL 196
+Q++ GV + H+ ++ HRDLK +N L+ + A LKI FG +K+ V T
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTP 180
Query: 197 WYRAPEILLNLGY-GTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL-KCIFRVIGTPSMN 254
Y APE+LL Y G D+WS G + M F E + K I R++
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV---- 236
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYF 313
QY+ + I +C L+ + +PA RIS + H +F
Sbjct: 237 --------------QYAIPDYVHISPEC----RHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 133/305 (43%), Gaps = 52/305 (17%)
Query: 27 LCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLD----TF 82
+ ++G GAYG V K R + + G A+K++R +N + + +L LD T
Sbjct: 39 IXELGRGAYGVVEKXRHVPS-GQIXAVKRIRATVN-------SQEQKRLLXDLDISXRTV 90
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK--VKELTR 140
+ P V F+ + R V++ E D L + ++ G + + + ++
Sbjct: 91 DCPFTVTFYGALF-------REGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAV 143
Query: 141 QMLKGVDFLHSH-RIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYR 199
++K ++ LHS +IHRD+KP N+LI G +K DFG++ D+ Y
Sbjct: 144 SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYX 203
Query: 200 APEIL---LNL-GYGTPVDIWSIGCVMAEMWRL-VPLFCASTEVEQLKCIFRVIGTPSMN 254
APE + LN GY DIWS+G E+ L P T +QLK +V+ PS
Sbjct: 204 APERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLK---QVVEEPS-- 258
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
Q FSA F+D S+ L N +R + + +HP+F
Sbjct: 259 -------------PQLPADKFSAEFVDFTSQC-------LKKNSKERPTYPELXQHPFFT 298
Query: 315 EKENE 319
E++
Sbjct: 299 LHESK 303
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 65/312 (20%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
Y L QIG G VF+ L K A+K + ++ ++ S EI+ L +L
Sbjct: 14 YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 71
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
I+R +D ++D+ +Y++ E + DL S+++K + + K + ML
Sbjct: 72 D-KIIRLYDYE----ITDQY---IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNML 121
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYRA 200
+ V +H H I+H DLKP N LI G LK+ DFG+A D ++ S V T+ Y
Sbjct: 122 EAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 180
Query: 201 PEILLNLGYG-----------TPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIG 249
PE + ++ D+WS+GC++ M G
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM---------------------TYG 219
Query: 250 TPSMNEWPENISLMWSSFEQYSKVAFSAI-------FMDCCSKANSLLESMLTFNPADRI 302
+ IS + + + ++ F I + CC L +P RI
Sbjct: 220 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCC----------LKRDPKQRI 269
Query: 303 SAADALEHPYFK 314
S + L HPY +
Sbjct: 270 SIPELLAHPYVQ 281
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 126/306 (41%), Gaps = 72/306 (23%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMS---TLREISILKQLDTFEHPN 86
+G GA GT+ N+ VA+K++ +P RE+ +L++ D EHPN
Sbjct: 32 LGHGAEGTIVYRGMFDNRD--VAVKRI--------LPECFSFADREVQLLRESD--EHPN 79
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
++R+F +++ Y+ E L Y+E+ L + L +Q G+
Sbjct: 80 VIRYF-------CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQQTTSGL 131
Query: 147 DFLHSHRIIHRDLKPQNLLITRA---GGLK--IADFGLAKTFDYDM----MLTSVVVTLW 197
LHS I+HRDLKP N+LI+ G +K I+DFGL K + V T
Sbjct: 132 AHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 198 YRAPEILLNLGYGTP---VDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN 254
+ APE+L P VDI+S GCV + VI
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAGCVF----------------------YYVIS----- 224
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSK-------ANSLLESMLTFNPADRISAADA 307
E S ++ + + A +DC A L+E M+ +P R SA
Sbjct: 225 ---EGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHV 281
Query: 308 LEHPYF 313
L+HP+F
Sbjct: 282 LKHPFF 287
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 65/312 (20%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
Y L QIG G VF+ L K A+K + ++ ++ S EI+ L +L
Sbjct: 11 YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
I+R +D ++D+ +Y++ E + DL S+++K + + K + ML
Sbjct: 69 -DKIIRLYDYE----ITDQ---YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNML 118
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYRA 200
+ V +H H I+H DLKP N LI G LK+ DFG+A D ++ S V T+ Y
Sbjct: 119 EAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 177
Query: 201 PEILLNLGYG-----------TPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIG 249
PE + ++ D+WS+GC++ M G
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM---------------------TYG 216
Query: 250 TPSMNEWPENISLMWSSFEQYSKVAFSAI-------FMDCCSKANSLLESMLTFNPADRI 302
+ IS + + + ++ F I + CC L +P RI
Sbjct: 217 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCC----------LKRDPKQRI 266
Query: 303 SAADALEHPYFK 314
S + L HPY +
Sbjct: 267 SIPELLAHPYVQ 278
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 65/312 (20%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
Y L QIG G VF+ L K A+K + ++ ++ S EI+ L +L
Sbjct: 10 YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 67
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
I+R +D ++D+ +Y++ E + DL S+++K + + K + ML
Sbjct: 68 D-KIIRLYDYE----ITDQ---YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNML 117
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYRA 200
+ V +H H I+H DLKP N LI G LK+ DFG+A D ++ S V T+ Y
Sbjct: 118 EAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 176
Query: 201 PEILLNLGYG-----------TPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIG 249
PE + ++ D+WS+GC++ M G
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM---------------------TYG 215
Query: 250 TPSMNEWPENISLMWSSFEQYSKVAFSAI-------FMDCCSKANSLLESMLTFNPADRI 302
+ IS + + + ++ F I + CC L +P RI
Sbjct: 216 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCC----------LKRDPKQRI 265
Query: 303 SAADALEHPYFK 314
S + L HPY +
Sbjct: 266 SIPELLAHPYVQ 277
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 65/327 (19%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMS 68
S NLD + L D ++ L +G G++G V A D + A+K L+ V + +D +
Sbjct: 10 SNNLDRVKLTD--FNFLMVLGKGSFGKVMLA-DRKGTEELYAIKILKKDVVIQDDDVE-C 65
Query: 69 TLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD--------QDLGS 120
T+ E +L LD F +H + +R +Y + E+V+ Q +G
Sbjct: 66 TMVEKRVLALLDK------PPFLTQLHSCFQTVDR---LYFVMEYVNGGDLMYHIQQVGK 116
Query: 121 YMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA 180
+ E P A+++ G+ FLH II+RDLK N+++ G +KIADFG+
Sbjct: 117 FKE--PQAVFYAAEIS-------IGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMC 167
Query: 181 KTFDYDMMLT-SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
K D + T T Y APEI+ YG VD W+ G ++ EM P F E E
Sbjct: 168 KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
Query: 240 QLKCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPA 299
+F+ I +++ +P+++S +A S+ + ++T +PA
Sbjct: 228 ----LFQSIMEHNVS-YPKSLS----------------------KEAVSICKGLMTKHPA 260
Query: 300 DRISAA-----DALEHPYFKEKENEPL 321
R+ D EH +F+ + E L
Sbjct: 261 KRLGCGPEGERDVREHAFFRRIDWEKL 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 150/334 (44%), Gaps = 52/334 (15%)
Query: 1 MYEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKL 60
M E S+ S+N D +L + IG GA V +A K VA+K++ ++
Sbjct: 1 MSEDSSALPWSINRDDYELQE-------VIGSGATAVV-QAAYCAPKKEKVAIKRINLEK 52
Query: 61 NEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYL--------IFE 112
+ + L+EI + Q HPNIV ++ ++ DE +L + L I +
Sbjct: 53 CQTSMD-ELLKEIQAMSQC---HHPNIVSYYTSF---VVKDELWLVMKLLSGGSVLDIIK 105
Query: 113 HVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGL 172
H+ G + L S + + R++L+G+++LH + IHRD+K N+L+ G +
Sbjct: 106 HIVAK-GEHKSGV----LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSV 160
Query: 173 KIADFGLAKTFDYDMMLT------SVVVTLWYRAPEILLNL-GYGTPVDIWSIGCVMAEM 225
+IADFG++ +T + V T + APE++ + GY DIWS G E+
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 226 WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSK 285
+ ++ L + PS+ ++ ++ ++Y K +F + C K
Sbjct: 221 ATGAAPYHKYPPMKVLMLTLQN-DPPSLETGVQDKEML----KKYGK-SFRKMISLCLQK 274
Query: 286 ANSLLESMLTFNPADRISAADALEHPYFKEKENE 319
+P R +AA+ L H +F++ +N+
Sbjct: 275 -----------DPEKRPTAAELLRHKFFQKAKNK 297
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 141/347 (40%), Gaps = 71/347 (20%)
Query: 1 MYEYSADTIQSLNLDSLDLG----DKK--------------YDELCQIGCGAYGTVFKAR 42
M E +A + ++DS DLG DK Y L QIG G VF+
Sbjct: 17 MKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQV- 75
Query: 43 DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDE 102
L K A+K + ++ ++ S EI+ L +L I+R +D ++D+
Sbjct: 76 -LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD-KIIRLYDYE----ITDQ 129
Query: 103 RYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQ 162
+Y++ E + DL S+++K + + K + ML+ V +H H I+H DLKP
Sbjct: 130 ---YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 163 NLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLWYRAPEILLNLGYG--------- 210
N LI G LK+ DFG+A D ++ S V + Y PE + ++
Sbjct: 185 NFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 211 --TPVDIWSIGCVMAEM-WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSF 267
D+WS+GC++ M + P ++ +L I + PE
Sbjct: 244 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE--------- 294
Query: 268 EQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
+ V + CC L +P RIS + L HPY +
Sbjct: 295 KDLQDV------LKCC----------LKRDPKQRISIPELLAHPYVQ 325
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 127/312 (40%), Gaps = 47/312 (15%)
Query: 9 IQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMS 68
+Q L+ +S+ D Y+ IG G+Y R + N K+ K D
Sbjct: 10 VQQLHRNSIQFTDG-YEVKEDIGVGSYSVC--KRCIHKATNXEFAVKIIDKSKRD----- 61
Query: 69 TLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKC-PP 127
EI IL L +HPNI+ DV D +Y VY++ E G ++K
Sbjct: 62 PTEEIEIL--LRYGQHPNIITLKDV-----YDDGKY--VYVVTELXKG--GELLDKILRQ 110
Query: 128 PGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGG----LKIADFGLAKTF 183
S + + + K V++LH+ ++HRDLKP N+L G ++I DFG AK
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 184 DYDM-MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLK 242
+ +L + T + APE+L GY DIWS+G ++ F +
Sbjct: 171 RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD----- 225
Query: 243 CIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCS-KANSLLESMLTFNPADR 301
+ PE I S K + S + + S A L+ L +P R
Sbjct: 226 ------------DTPEEILARIGS----GKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQR 269
Query: 302 ISAADALEHPYF 313
++AA L HP+
Sbjct: 270 LTAALVLRHPWI 281
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 58/311 (18%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGI--PMSTLREIS 74
LG ++ + +G G++G V AR ++ G+ A+K L+ V L +D + M+ R +S
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLAR-VKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSAS 133
+ + HP + + F + +R ++ + E V+ DL +++K +
Sbjct: 79 LARN-----HPFLTQLFCCFQ----TPDR---LFFVMEFVNGGDLMFHIQKSR--RFDEA 124
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+ + +++ + FLH II+RDLK N+L+ G K+ADFG+ K + + T+
Sbjct: 125 RARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF 184
Query: 194 V-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFC--ASTEVEQLKCIFRVIGT 250
T Y APEIL + YG VD W++G ++ EM C A E E +F I
Sbjct: 185 CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEM------LCGHAPFEAENEDDLFEAI-- 236
Query: 251 PSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA--- 307
+N+ E + W A +L+S +T NP R+ +
Sbjct: 237 --LND--EVVYPTWLH-----------------EDATGILKSFMTKNPTMRLGSLTQGGE 275
Query: 308 ---LEHPYFKE 315
L HP+FKE
Sbjct: 276 HAILRHPFFKE 286
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 137/308 (44%), Gaps = 39/308 (12%)
Query: 16 SLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR-EIS 74
S LG + +D L IG G+Y V R L+ AMK ++ +L D + ++ E
Sbjct: 14 SSSLGLQDFDLLRVIGRGSYAKVLLVR-LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSAS 133
+ +Q HP +V +H ++ R ++ + E+V+ DL +M++ L
Sbjct: 73 VFEQASN--HPFLVG----LHSCFQTESR---LFFVIEYVNGGDLMFHMQR--QRKLPEE 121
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+ + ++ +++LH II+RDLK N+L+ G +K+ D+G+ K TS
Sbjct: 122 HARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF 181
Query: 194 V-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T Y APEIL YG VD W++G +M EM + F ++G+
Sbjct: 182 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM-------------AGRSPFDIVGSSD 228
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISA------AD 306
+ L E+ ++ S KA S+L+S L +P +R+ AD
Sbjct: 229 NPDQNTEDYLFQVILEKQIRIPRS-----MSVKAASVLKSFLNKDPKERLGCLPQTGFAD 283
Query: 307 ALEHPYFK 314
HP+F+
Sbjct: 284 IQGHPFFR 291
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 54/301 (17%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDT 81
+D L +G G +G V R+ + G Y AMK LR V + +D + T+ E +L+
Sbjct: 7 FDYLKLLGKGTFGKVILVRE-KATGRYYAMKILRKEVIIAKDEVA-HTVTESRVLQNT-- 62
Query: 82 FEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT 139
HP +++ H + Y +F H+ + E+ + + +
Sbjct: 63 -RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR------ERV----FTEERARFYG 111
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTLWY 198
+++ +++LHS +++RD+K +NL++ + G +KI DFGL K D + + T Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
APE+L + YG VD W +G VM EM +P + E +F +I + +P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----LFELILMEEIR-FP 225
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRIS-----AADALEHPY 312
+S +A SLL +L +P R+ A + +EH +
Sbjct: 226 RTLS----------------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 313 F 313
F
Sbjct: 264 F 264
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR-EISILK 77
LG + +D L IG G+Y V R L+ AMK ++ +L D + ++ E + +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVR-LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVK 136
Q HP +V +H ++ R ++ + E+V+ DL +M++ L +
Sbjct: 61 QASN--HPFLVG----LHSCFQTESR---LFFVIEYVNGGDLMFHMQRQRK--LPEEHAR 109
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV-T 195
+ ++ +++LH II+RDLK N+L+ G +K+ D+G+ K TS T
Sbjct: 110 FYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGT 169
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
Y APEIL YG VD W++G +M EM + F ++G+ +
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMM-------------AGRSPFDIVGSSDNPD 216
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISA------ADALE 309
L E+ ++ S KA S+L+S L +P +R+ AD
Sbjct: 217 QNTEDYLFQVILEKQIRIPRS-----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 271
Query: 310 HPYFK 314
HP+F+
Sbjct: 272 HPFFR 276
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 54/301 (17%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDT 81
+D L +G G +G V R+ + G Y AMK LR V + +D + T+ E +L+
Sbjct: 7 FDYLKLLGKGTFGKVILVRE-KATGRYYAMKILRKEVIIAKDEVA-HTVTESRVLQNT-- 62
Query: 82 FEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT 139
HP +++ H + Y +F H+ + E+ + + +
Sbjct: 63 -RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR------ERV----FTEERARFYG 111
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTLWY 198
+++ +++LHS +++RD+K +NL++ + G +KI DFGL K D + + T Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
APE+L + YG VD W +G VM EM +P + E +F +I + +P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----LFELILMEEIR-FP 225
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRIS-----AADALEHPY 312
+S +A SLL +L +P R+ A + +EH +
Sbjct: 226 RTLS----------------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 313 F 313
F
Sbjct: 264 F 264
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 14/213 (6%)
Query: 18 DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILK 77
D+ ++ L IG G++G V + K Y + K E + +E+ I++
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE 137
L EHP +V + ++ ++ V L+ + DL ++++ VK
Sbjct: 71 GL---EHPFLVNLWYSFQD---EEDMFMVVDLL---LGGDLRYHLQQNV--HFKEETVKL 119
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW 197
+++ +D+L + RIIHRD+KP N+L+ G + I DF +A + +T++ T
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKP 179
Query: 198 YRAPEILLN---LGYGTPVDIWSIGCVMAEMWR 227
Y APE+ + GY VD WS+G E+ R
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR 212
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 32/243 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 121 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 237
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE---QLKCIFRVIGTPSMNEWP 257
PE+L Y D+WS+G +M + P F ++ + +K R+ E+P
Sbjct: 238 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQYEFP 293
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ WS + K+ L+ ++L P R++ + + HP+ +
Sbjct: 294 ---NPEWSEVSEEVKM---------------LIRNLLKTEPTQRMTITEFMNHPWIMQST 335
Query: 318 NEP 320
P
Sbjct: 336 KVP 338
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 32/243 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 85 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 201
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE---QLKCIFRVIGTPSMNEWP 257
PE+L Y D+WS+G +M + P F ++ + +K R+ E+P
Sbjct: 202 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQYEFP 257
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ WS + K+ L+ ++L P R++ + + HP+ +
Sbjct: 258 ---NPEWSEVSEEVKM---------------LIRNLLKTEPTQRMTITEFMNHPWIMQST 299
Query: 318 NEP 320
P
Sbjct: 300 KVP 302
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR-EISILK 77
LG + +D L IG G+Y V R L+ AMK ++ +L D + ++ E + +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVR-LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 78 QLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVK 136
Q HP +V +H ++ R ++ + E+V+ DL +M++ L +
Sbjct: 65 QASN--HPFLVG----LHSCFQTESR---LFFVIEYVNGGDLMFHMQRQRK--LPEEHAR 113
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV-T 195
+ ++ +++LH II+RDLK N+L+ G +K+ D+G+ K TS T
Sbjct: 114 FYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGT 173
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNE 255
Y APEIL YG VD W++G +M EM + F ++G+ +
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMM-------------AGRSPFDIVGSSDNPD 220
Query: 256 WPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISA------ADALE 309
L E+ ++ S KA S+L+S L +P +R+ AD
Sbjct: 221 QNTEDYLFQVILEKQIRIPRS-----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275
Query: 310 HPYFK 314
HP+F+
Sbjct: 276 HPFFR 280
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 32/243 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 69 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 185
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE---QLKCIFRVIGTPSMNEWP 257
PE+L Y D+WS+G +M + P F ++ + +K R+ E+P
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQYEFP 241
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ WS + K+ L+ ++L P R++ + + HP+ +
Sbjct: 242 ---NPEWSEVSEEVKM---------------LIRNLLKTEPTQRMTITEFMNHPWIMQST 283
Query: 318 NEP 320
P
Sbjct: 284 KVP 286
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 32/243 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 115 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE---QLKCIFRVIGTPSMNEWP 257
PE+L Y D+WS+G +M + P F ++ + +K R+ E+P
Sbjct: 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQYEFP 287
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ WS + K+ L+ ++L P R++ + + HP+ +
Sbjct: 288 ---NPEWSEVSEEVKM---------------LIRNLLKTEPTQRMTITEFMNHPWIMQST 329
Query: 318 NEP 320
P
Sbjct: 330 KVP 332
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 56/302 (18%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDT 81
+D L +G G +G V R+ + G Y AMK LR V + +D + T+ E +L+
Sbjct: 10 FDYLKLLGKGTFGKVILVRE-KATGRYYAMKILRKEVIIAKDEVA-HTVTESRVLQNT-- 65
Query: 82 FEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT 139
HP +++ H + Y +F H+ + E+ + + +
Sbjct: 66 -RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR------ERV----FTEERARFYG 114
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTLWY 198
+++ +++LHS +++RD+K +NL++ + G +KI DFGL K D + + T Y
Sbjct: 115 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEY 174
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMW--RLVPLFCASTEVEQLKCIFRVIGTPSMNEW 256
APE+L + YG VD W +G VM EM RL P + E +F +I + +
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHER-----LFELILMEEIR-F 227
Query: 257 PENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRIS-----AADALEHP 311
P +S +A SLL +L +P R+ A + +EH
Sbjct: 228 PRTLS----------------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 265
Query: 312 YF 313
+F
Sbjct: 266 FF 267
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 32/243 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 71 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE---QLKCIFRVIGTPSMNEWP 257
PE+L Y D+WS+G +M + P F ++ + +K R+ E+P
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQYEFP 243
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ WS + K+ L+ ++L P R++ + + HP+ +
Sbjct: 244 ---NPEWSEVSEEVKM---------------LIRNLLKTEPTQRMTITEFMNHPWIMQST 285
Query: 318 NEP 320
P
Sbjct: 286 KVP 288
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 32/243 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 71 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE---QLKCIFRVIGTPSMNEWP 257
PE+L Y D+WS+G +M + P F ++ + +K R+ E+P
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQYEFP 243
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ WS + K+ L+ ++L P R++ + + HP+ +
Sbjct: 244 ---NPEWSEVSEEVKM---------------LIRNLLKTEPTQRMTITEFMNHPWIMQST 285
Query: 318 NEP 320
P
Sbjct: 286 KVP 288
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 32/243 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 70 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 186
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE---QLKCIFRVIGTPSMNEWP 257
PE+L Y D+WS+G +M + P F ++ + +K R+ E+P
Sbjct: 187 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQYEFP 242
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ WS + K+ L+ ++L P R++ + + HP+ +
Sbjct: 243 ---NPEWSEVSEEVKM---------------LIRNLLKTEPTQRMTITEFMNHPWIMQST 284
Query: 318 NEP 320
P
Sbjct: 285 KVP 287
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 32/243 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 77 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 193
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE---QLKCIFRVIGTPSMNEWP 257
PE+L Y D+WS+G +M + P F ++ + +K R+ E+P
Sbjct: 194 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQYEFP 249
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ WS + K+ L+ ++L P R++ + + HP+ +
Sbjct: 250 ---NPEWSEVSEEVKM---------------LIRNLLKTEPTQRMTITEFMNHPWIMQST 291
Query: 318 NEP 320
P
Sbjct: 292 KVP 294
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 76 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 192
Query: 201 PEILLNLGYGTPVDIWSIGCVM 222
PE+L Y D+WS+G +M
Sbjct: 193 PEVLGPEKYDKSCDMWSLGVIM 214
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 75 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 191
Query: 201 PEILLNLGYGTPVDIWSIGCVM 222
PE+L Y D+WS+G +M
Sbjct: 192 PEVLGPEKYDKSCDMWSLGVIM 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 39/308 (12%)
Query: 16 SLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR-EIS 74
S LG + +D L IG G+Y V R L+ AM+ ++ +L D + ++ E
Sbjct: 46 SSSLGLQDFDLLRVIGRGSYAKVLLVR-LKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSAS 133
+ +Q HP +V +H ++ R ++ + E+V+ DL +M++ L
Sbjct: 105 VFEQASN--HPFLVG----LHSCFQTESR---LFFVIEYVNGGDLMFHMQRQRK--LPEE 153
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV 193
+ + ++ +++LH II+RDLK N+L+ G +K+ D+G+ K TS
Sbjct: 154 HARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF 213
Query: 194 V-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPS 252
T Y APEIL YG VD W++G +M EM + F ++G+
Sbjct: 214 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM-------------AGRSPFDIVGSSD 260
Query: 253 MNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISA------AD 306
+ L E+ ++ S KA S+L+S L +P +R+ AD
Sbjct: 261 NPDQNTEDYLFQVILEKQIRIPRS-----LSVKAASVLKSFLNKDPKERLGCHPQTGFAD 315
Query: 307 ALEHPYFK 314
HP+F+
Sbjct: 316 IQGHPFFR 323
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 54/301 (17%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDT 81
+D L +G G +G V R+ + G Y AMK LR V + +D + T+ E +L+
Sbjct: 12 FDYLKLLGKGTFGKVILVRE-KATGRYYAMKILRKEVIIAKDEVA-HTVTESRVLQNT-- 67
Query: 82 FEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT 139
HP +++ H + Y +F H+ + E+ + + +
Sbjct: 68 -RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR------ERV----FTEERARFYG 116
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTLWY 198
+++ +++LHS +++RD+K +NL++ + G +KI DFGL K D + T Y
Sbjct: 117 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 176
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
APE+L + YG VD W +G VM EM +P + E +F +I + +P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----LFELILMEEIR-FP 230
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRIS-----AADALEHPY 312
+S +A SLL +L +P R+ A + +EH +
Sbjct: 231 RTLS----------------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 268
Query: 313 F 313
F
Sbjct: 269 F 269
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 27 LCQIGCGAYGTVFKARD---LQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ Q+G G +G+V R N G VA+K+L+ + REI ILK L +
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHS-- 70
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
IV++ V + R + YL + L + + L AS++ + Q+
Sbjct: 71 -DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQIC 124
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYDMMLTSVVVTLWYR 199
KG+++L S R +HRDL +N+L+ +KIADFGLAK DY ++ +++
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCAST 236
APE L + + D+WS G V+ E++ C+ +
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 221
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 27 LCQIGCGAYGTVFKARD---LQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ Q+G G +G+V R N G VA+K+L+ + REI ILK L +
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHS-- 83
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
IV++ V + R + YL + L + + L AS++ + Q+
Sbjct: 84 -DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQIC 137
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYDMMLTSVVVTLWYR 199
KG+++L S R +HRDL +N+L+ +KIADFGLAK DY ++ +++
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCAST 236
APE L + + D+WS G V+ E++ C+ +
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 234
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 54/301 (17%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDT 81
+D L +G G +G V R+ + G Y AMK LR V + +D + T+ E +L+
Sbjct: 7 FDYLKLLGKGTFGKVILVRE-KATGRYYAMKILRKEVIIAKDEVA-HTVTESRVLQNT-- 62
Query: 82 FEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT 139
HP +++ H + Y +F H+ + E+ + + +
Sbjct: 63 -RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR------ERV----FTEERARFYG 111
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTLWY 198
+++ +++LHS +++RD+K +NL++ + G +KI DFGL K D + T Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
APE+L + YG VD W +G VM EM +P + E +F +I + +P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----LFELILMEEIR-FP 225
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRIS-----AADALEHPY 312
+S +A SLL +L +P R+ A + +EH +
Sbjct: 226 RTLS----------------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 313 F 313
F
Sbjct: 264 F 264
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 14/219 (6%)
Query: 26 ELCQI-GCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
EL +I G G V ARDL+ + VA+K LR L D P LR + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRLHRD-VAVKVLRADLARD--PSFYLRFRREAQNAAALNH 71
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P IV + + Y++ E+VD L + P ++ + E+
Sbjct: 72 PAIVAVYATGEAETPAGP---LPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLT---SVVVTLWYR 199
+ ++F H + IIHRD+KP N++I+ +K+ DFG+A+ D +T +V+ T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEV 238
+PE D++S+GCV+ E+ P F + V
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 27 LCQIGCGAYGTVFKARD---LQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ Q+G G +G+V R N G VA+K+L+ + REI ILK L +
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHS-- 71
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
IV++ V + R + YL + L + + L AS++ + Q+
Sbjct: 72 -DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQIC 125
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYDMMLTSVVVTLWYR 199
KG+++L S R +HRDL +N+L+ +KIADFGLAK DY ++ +++
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCAST 236
APE L + + D+WS G V+ E++ C+ +
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 222
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 54/301 (17%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDT 81
+D L +G G +G V R+ + G Y AMK LR V + +D + T+ E +L+
Sbjct: 7 FDYLKLLGKGTFGKVILVRE-KATGRYYAMKILRKEVIIAKDEVA-HTVTESRVLQNT-- 62
Query: 82 FEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT 139
HP +++ H + Y +F H+ + E+ + + +
Sbjct: 63 -RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR------ERV----FTEERARFYG 111
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTLWY 198
+++ +++LHS +++RD+K +NL++ + G +KI DFGL K D + T Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
APE+L + YG VD W +G VM EM +P + E +F +I + +P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----LFELILMEEIR-FP 225
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRIS-----AADALEHPY 312
+S +A SLL +L +P R+ A + +EH +
Sbjct: 226 RTLS----------------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 313 F 313
F
Sbjct: 264 F 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 54/301 (17%)
Query: 24 YDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDT 81
+D L +G G +G V R+ + G Y AMK LR V + +D + T+ E +L+
Sbjct: 7 FDYLKLLGKGTFGKVILVRE-KATGRYYAMKILRKEVIIAKDEVA-HTVTESRVLQNT-- 62
Query: 82 FEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELT 139
HP +++ H + Y +F H+ + E+ + + +
Sbjct: 63 -RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR------ERV----FTEERARFYG 111
Query: 140 RQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTLWY 198
+++ +++LHS +++RD+K +NL++ + G +KI DFGL K D + T Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMW-RLVPLFCASTEVEQLKCIFRVIGTPSMNEWP 257
APE+L + YG VD W +G VM EM +P + E +F +I + +P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----LFELILMEEIR-FP 225
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRIS-----AADALEHPY 312
+S +A SLL +L +P R+ A + +EH +
Sbjct: 226 RTLS----------------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 313 F 313
F
Sbjct: 264 F 264
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 32/243 (13%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 69 PHIVRIVDV-YENLYAGRKCLLI--VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT T +Y A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVA 185
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE---QLKCIFRVIGTPSMNEWP 257
PE+L Y D+WS+G +M + P F ++ + +K R+ E+P
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQYEFP 241
Query: 258 ENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKE 317
+ WS + K+ L+ ++L P R++ + + HP+ +
Sbjct: 242 ---NPEWSEVSEEVKM---------------LIRNLLKTEPTQRMTITEFMNHPWIMQST 283
Query: 318 NEP 320
P
Sbjct: 284 KVP 286
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 39/238 (16%)
Query: 2 YEYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
YE I+ L + + D YD + IG GA+G V + +R K +
Sbjct: 60 YEKIVKKIRGLQMKAED-----YDVVKVIGRGAFGEV---------------QLVRHKAS 99
Query: 62 EDGIPMSTLREISILKQLDT---FEHPNIVRFFD----VIHQNILSDERYLTVYLIFEHV 114
+ M L + ++K+ D+ +E +I+ F + V D++YL Y++ E++
Sbjct: 100 QKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL--YMVMEYM 157
Query: 115 -DQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLK 173
DL + M P A K T +++ +D +HS +IHRD+KP N+L+ + G LK
Sbjct: 158 PGGDLVNLMSNYDVPEKWA---KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLK 214
Query: 174 IADFGLAKTFDYDMML--TSVVVTLWYRAPEILLNLG----YGTPVDIWSIGCVMAEM 225
+ADFG D M+ + V T Y +PE+L + G YG D WS+G + EM
Sbjct: 215 LADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 272
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 131/316 (41%), Gaps = 75/316 (23%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G+ GTV Q G VA+K++ + + L EI +L + D +HPN++R
Sbjct: 41 LGYGSSGTVVFQGSFQ--GRPVAVKRMLIDFCD-----IALMEIKLLTESD--DHPNVIR 91
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE-----LTRQMLK 144
++ S+ +Y+ E + +L +E + KE L RQ+
Sbjct: 92 YY-------CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 145 GVDFLHSHRIIHRDLKPQNLLI-----------TRAGGLK--IADFGLAKTFD-----YD 186
GV LHS +IIHRDLKPQN+L+ T A L+ I+DFGL K D +
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 187 MMLTSVVVTLWYRAPEIL---LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKC 243
L + T +RAPE+L +DI+S+GCV
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV---------------------- 242
Query: 244 IFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDC------CSKANSLLESMLTFN 297
F I + + + + +S + FS M C ++A L+ M+ +
Sbjct: 243 -FYYILSKGKHPFGDK----YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 297
Query: 298 PADRISAADALEHPYF 313
P R +A L HP F
Sbjct: 298 PLKRPTAMKVLRHPLF 313
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 41/187 (21%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-------- 192
Q+ + V+FLHS ++HRDLKP N+ T +K+ DFGL D D +V
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 193 -----VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRV 247
V T Y +PE + Y VDI+S+G ++ E+ L+ ST++E+++ I V
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL-----LYSFSTQMERVRIITDV 286
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADA 307
+ F +F + + +++ ML+ +P +R A D
Sbjct: 287 -----------------------RNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDI 323
Query: 308 LEHPYFK 314
+E+ F+
Sbjct: 324 IENAIFE 330
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G +G VF+A++ + NY A+K++R+ N + +RE+ L +L EHP IVR
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNY-AIKRIRLP-NRELAREKVMREVKALAKL---EHPGIVR 68
Query: 90 FFDV 93
+F+
Sbjct: 69 YFNA 72
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 136/295 (46%), Gaps = 51/295 (17%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G +G V + + +K Y+A K ++VK D + + +EISIL + H NI+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMA-KFVKVK-GTDQVLVK--KEISIL---NIARHRNILH 65
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG--LSASKVKELTRQMLKGVD 147
+H++ S E + ++ +D E+ L+ ++ Q+ + +
Sbjct: 66 ----LHESFESMEELVMIFEFISGLD-----IFERINTSAFELNEREIVSYVHQVCEALQ 116
Query: 148 FLHSHRIIHRDLKPQNLL--ITRAGGLKIADFGLAKTF----DYDMMLTSVVVTLWYRAP 201
FLHSH I H D++P+N++ R+ +KI +FG A+ ++ ++ T+ Y AP
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP----EYYAP 172
Query: 202 EILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENIS 261
E+ + T D+WS+G ++ + + F A T + ENI
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN----------------QQIIENIM 216
Query: 262 LMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEK 316
+F++ + F + +A ++ +L R++A++AL+HP+ K+K
Sbjct: 217 NAEYTFDEEA-------FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 131/316 (41%), Gaps = 75/316 (23%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G+ GTV Q G VA+K++ + + L EI +L + D +HPN++R
Sbjct: 41 LGYGSSGTVVFQGSFQ--GRPVAVKRMLIDFCD-----IALMEIKLLTESD--DHPNVIR 91
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE-----LTRQMLK 144
++ S+ +Y+ E + +L +E + KE L RQ+
Sbjct: 92 YY-------CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 145 GVDFLHSHRIIHRDLKPQNLLI-----------TRAGGLK--IADFGLAKTFD-----YD 186
GV LHS +IIHRDLKPQN+L+ T A L+ I+DFGL K D +
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 187 MMLTSVVVTLWYRAPEIL---LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKC 243
L + T +RAPE+L +DI+S+GCV
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV---------------------- 242
Query: 244 IFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDC------CSKANSLLESMLTFN 297
F I + + + + +S + FS M C ++A L+ M+ +
Sbjct: 243 -FYYILSKGKHPFGDK----YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 297
Query: 298 PADRISAADALEHPYF 313
P R +A L HP F
Sbjct: 298 PLKRPTAMKVLRHPLF 313
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 104 YLTVYLIFEHVDQD----LGSY---MEKCPPPGLSASKVKELTRQMLKGVDFLHSHR-II 155
Y VY+I+E+++ D Y ++K + +K + + +L ++H+ + I
Sbjct: 115 YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNIC 174
Query: 156 HRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNLGY--GTPV 213
HRD+KP N+L+ + G +K++DFG ++ + D + T + PE N G V
Sbjct: 175 HRDVKPSNILMDKNGRVKLSDFGESE-YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKV 233
Query: 214 DIWSIG-CVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSFEQYSK 272
DIWS+G C+ + +VP + VE +F I T ++ E+P + + K
Sbjct: 234 DIWSLGICLYVMFYNVVPFSLKISLVE----LFNNIRTKNI-EYPLDRNHFLYPLTN-KK 287
Query: 273 VAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFKEKENEPL 321
S F+ ++ L+ L NPA+RI++ DAL+H + + E L
Sbjct: 288 STCSNNFL--SNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDL 334
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 19/218 (8%)
Query: 27 LCQIGCGAYGTVFKARD---LQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
+ Q+G G +G+V R N G VA+K+L+ + REI ILK L +
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHS-- 67
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
IV++ V + + R + YL + L + + L AS++ + Q+
Sbjct: 68 -DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQIC 121
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV-----VVTLWY 198
KG+++L S R +HRDL +N+L+ +KIADFGLAK D V WY
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCAST 236
APE L + + D+WS G V+ E++ C+ +
Sbjct: 182 -APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 21 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 70
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 71 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 120
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 121 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 180
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 181 EAINYGTFTIKSDVWSFGILLTEI 204
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 20 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 69
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 70 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEI 203
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 22 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 71
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 72 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 121
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 122 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 181
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 182 EAINYGTFTIKSDVWSFGILLTEI 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 20 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 69
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 70 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD--MMLTSVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 179
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEI 203
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 136/301 (45%), Gaps = 45/301 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
IG GA V +A K VA+K++ ++ + + L+EI + Q HPNIV
Sbjct: 18 IGSGATAVV-QAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQC---HHPNIVS 72
Query: 90 FFDVIHQNILSDERYLTVYL--------IFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
++ ++ DE +L + L I +H+ G + L S + + R+
Sbjct: 73 YYTSF---VVKDELWLVMKLLSGGSVLDIIKHIVAK-GEHKSGV----LDESTIATILRE 124
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT------SVVVT 195
+L+G+++LH + IHRD+K N+L+ G ++IADFG++ +T + V T
Sbjct: 125 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 196 LWYRAPEILLNL-GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMN 254
+ APE++ + GY DIWS G E+ + ++ L + PS+
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN-DPPSLE 243
Query: 255 EWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAADALEHPYFK 314
++ ++ ++Y K +F + C K +P R +AA+ L H +F+
Sbjct: 244 TGVQDKEML----KKYGK-SFRKMISLCLQK-----------DPEKRPTAAELLRHKFFQ 287
Query: 315 E 315
+
Sbjct: 288 K 288
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 20 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 69
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 70 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEI 203
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 26 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 75
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 76 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD--MMLTSVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 185
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEI 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 25 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 74
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 75 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 124
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD--MMLTSVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 125 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 184
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 185 EAINYGTFTIKSDVWSFGILLTEI 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 29 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 78
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 79 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 128
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 129 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 188
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 189 EAINYGTFTIKSDVWSFGILLTEI 212
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 15 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 64
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 65 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 114
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 115 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 174
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 175 EAINYGTFTIKSDVWSFGILLTEI 198
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 7 DTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNED 63
DTI + L + + Y+ + IG GA+G V R + Y AMK K + D
Sbjct: 61 DTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVY-AMKLLSKFEMIKRSD 117
Query: 64 GIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYM 122
R+I P +V+ F D+RYL Y++ E++ DL + M
Sbjct: 118 SAFFWEERDIMAFAN-----SPWVVQLF-----YAFQDDRYL--YMVMEYMPGGDLVNLM 165
Query: 123 EKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT 182
P A + T +++ +D +HS IHRD+KP N+L+ ++G LK+ADFG
Sbjct: 166 SNYDVPEKWA---RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Query: 183 FDYDMMLT--SVVVTLWYRAPEILLNLG----YGTPVDIWSIGCVMAEM 225
+ + M+ + V T Y +PE+L + G YG D WS+G + EM
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 28 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 77
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 78 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 127
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 128 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 187
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 188 EAINYGTFTIKSDVWSFGILLTEI 211
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 26 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 75
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 76 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 185
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEI 209
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 7 DTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNED 63
DTI + L + + Y+ + IG GA+G V R + Y AMK K + D
Sbjct: 56 DTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVY-AMKLLSKFEMIKRSD 112
Query: 64 GIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYM 122
R+I P +V+ F D+RYL Y++ E++ DL + M
Sbjct: 113 SAFFWEERDIMAFAN-----SPWVVQLF-----YAFQDDRYL--YMVMEYMPGGDLVNLM 160
Query: 123 EKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT 182
P A + T +++ +D +HS IHRD+KP N+L+ ++G LK+ADFG
Sbjct: 161 SNYDVPEKWA---RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217
Query: 183 FDYDMML--TSVVVTLWYRAPEILLNLG----YGTPVDIWSIGCVMAEM 225
+ + M+ + V T Y +PE+L + G YG D WS+G + EM
Sbjct: 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 30 IGCGAYGTVFKARDLQNKGNY---VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G++G V AR + Y V KK +K E+ MS E ++L L +HP
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMS---ERNVL--LKNVKHPF 100
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY---MEKCPPPGLSASKVKELTRQML 143
+V +H + + ++ +Y + ++++ Y E+C + + ++
Sbjct: 101 LVG----LHFSFQTADK---LYFVLDYINGGELFYHLQRERC----FLEPRARFYAAEIA 149
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-TFDYDMMLTSVVVTLWYRAPE 202
+ +LHS I++RDLKP+N+L+ G + + DFGL K +++ ++ T Y APE
Sbjct: 150 SALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE 209
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+L Y VD W +G V+ EM +P F + E
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 7 DTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNED 63
DTI + L + + Y+ + IG GA+G V R + Y AMK K + D
Sbjct: 61 DTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVY-AMKLLSKFEMIKRSD 117
Query: 64 GIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYM 122
R+I P +V+ F D+RYL Y++ E++ DL + M
Sbjct: 118 SAFFWEERDIMAFAN-----SPWVVQLF-----YAFQDDRYL--YMVMEYMPGGDLVNLM 165
Query: 123 EKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT 182
P A + T +++ +D +HS IHRD+KP N+L+ ++G LK+ADFG
Sbjct: 166 SNYDVPEKWA---RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Query: 183 FDYDMMLT--SVVVTLWYRAPEILLNLG----YGTPVDIWSIGCVMAEM 225
+ + M+ + V T Y +PE+L + G YG D WS+G + EM
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 30 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 79
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 80 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 129
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD--MMLTSVVVTLWYRAP 201
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + + + + AP
Sbjct: 130 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 189
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + D+WS G ++ E+
Sbjct: 190 EAINYGTFTIKSDVWSFGILLTEI 213
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 131/320 (40%), Gaps = 79/320 (24%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G+ GTV Q G VA+K++ + + L EI +L + D +HPN++R
Sbjct: 23 LGYGSSGTVVFQGSFQ--GRPVAVKRMLIDFCD-----IALMEIKLLTESD--DHPNVIR 73
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE-----LTRQMLK 144
++ S+ +Y+ E + +L +E + KE L RQ+
Sbjct: 74 YY-------CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 145 GVDFLHSHRIIHRDLKPQNLLI-----------TRAGGLK--IADFGLAKTFD-----YD 186
GV LHS +IIHRDLKPQN+L+ T A L+ I+DFGL K D +
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 187 MMLTSVVVTLWYRAPEIL-------LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
L + T +RAPE+L +DI+S+GCV
Sbjct: 187 XNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV------------------ 228
Query: 240 QLKCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDC------CSKANSLLESM 293
F I + + + + +S + FS M C ++A L+ M
Sbjct: 229 -----FYYILSKGKHPFGDK----YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM 279
Query: 294 LTFNPADRISAADALEHPYF 313
+ +P R +A L HP F
Sbjct: 280 IDHDPLKRPTAMKVLRHPLF 299
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 30 IGCGAYGTVFKARDLQ----NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHP 85
IG GA+G VF+AR VA+K L+ + + D + RE +++ + F++P
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD-MQADFQREAALMAE---FDNP 110
Query: 86 NIVRFFDVI--------------HQNILSDERYLTVYLI--FEHVDQDLGSYMEKCPPPG 129
NIV+ V + ++ R ++ + + H D + + PP
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYD 186
LS ++ + RQ+ G+ +L + +HRDL +N L+ +KIADFGL++ DY
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ + + + PE + Y T D+W+ G V+ E++
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 131/320 (40%), Gaps = 79/320 (24%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G+ GTV Q G VA+K++ + + L EI +L + D +HPN++R
Sbjct: 23 LGYGSSGTVVFQGSFQ--GRPVAVKRMLIDFCD-----IALMEIKLLTESD--DHPNVIR 73
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE-----LTRQMLK 144
++ S+ +Y+ E + +L +E + KE L RQ+
Sbjct: 74 YY-------CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 145 GVDFLHSHRIIHRDLKPQNLLI-----------TRAGGLK--IADFGLAKTFD-----YD 186
GV LHS +IIHRDLKPQN+L+ T A L+ I+DFGL K D +
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 187 MMLTSVVVTLWYRAPEIL-------LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
L + T +RAPE+L +DI+S+GCV
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV------------------ 228
Query: 240 QLKCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDC------CSKANSLLESM 293
F I + + + + +S + FS M C ++A L+ M
Sbjct: 229 -----FYYILSKGKHPFGDK----YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM 279
Query: 294 LTFNPADRISAADALEHPYF 313
+ +P R +A L HP F
Sbjct: 280 IDHDPLKRPTAMKVLRHPLF 299
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 24/236 (10%)
Query: 1 MYEYSADTIQSLNLDSLDLGDKKYDELC------QIGCGAYGTVFKARDLQNKGNYVAMK 54
M +Y T ++L GD C +IG G++GTV +A + G+ VA+K
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA---EWHGSDVAVK 66
Query: 55 KLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQ--NILSDERYLTVYLIFE 112
L + LRE++I+K+L HPNIV F + Q N+ YL+ ++
Sbjct: 67 ILMEQDFHAERVNEFLREVAIMKRL---RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR 123
Query: 113 HVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHR--IIHRDLKPQNLLITRAG 170
+ + G+ + L + + + KG+++LH+ I+HRDLK NLL+ +
Sbjct: 124 LLHKS-GAREQ------LDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKY 176
Query: 171 GLKIADFGLAKTFDYDMMLTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+K+ DFGL++ + + T + APE+L + D++S G ++ E+
Sbjct: 177 TVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 7/141 (4%)
Query: 85 PNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQML 143
P+IVR DV ++N+ + + L + + E +D +L S ++ + + E+ + +
Sbjct: 115 PHIVRIVDV-YENLYAGRKCLLI--VXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRA---GGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
+ + +LHS I HRD+KP+NLL T LK+ DFG AK LT+ T +Y A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 201 PEILLNLGYGTPVDIWSIGCV 221
PE+L Y D WS+G +
Sbjct: 232 PEVLGPEKYDKSCDXWSLGVI 252
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 31/208 (14%)
Query: 27 LCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ----LDTF 82
L +G G++G V R N G Y AMK L+ ++ + L+++ L
Sbjct: 11 LRTLGTGSFGRVHLIRSRHN-GRYYAMKVLKKEI------VVRLKQVEHTNDERLMLSIV 63
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKC---PPPGLSASKVKEL 138
HP I+R + +++I ++++ +L S + K P P K
Sbjct: 64 THPFIIRMWGTFQDA-------QQIFMIMDYIEGGELFSLLRKSQRFPNP-----VAKFY 111
Query: 139 TRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLTSVVVTLW 197
++ +++LHS II+RDLKP+N+L+ + G +KI DFG AK D L T
Sbjct: 112 AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCG---TPD 168
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEM 225
Y APE++ Y +D WS G ++ EM
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEM 196
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 29/205 (14%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 20 RLGAGQAGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 69
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 70 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTS---VVVTLWYRA 200
+G+ F+ IHRDL+ N+L++ KIADFGLA+ + D T+ + + A
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTA 178
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEM 225
PE + + D+WS G ++ E+
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEI 203
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLD 80
+++ L +G G +G V ++ + G Y AMK L+ V + +D + TL E +L+
Sbjct: 152 EFEYLKLLGKGTFGKVILVKE-KATGRYYAMKILKKEVIVAKDEVA-HTLTENRVLQNS- 208
Query: 81 TFEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HP +++ H + Y +F H+ ++ S + +
Sbjct: 209 --RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----------FSEDRARFY 256
Query: 139 TRQMLKGVDFLHSHR-IIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTL 196
+++ +D+LHS + +++RDLK +NL++ + G +KI DFGL K D + + T
Sbjct: 257 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
Y APE+L + YG VD W +G VM EM
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEM 345
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLD 80
+++ L +G G +G V ++ + G Y AMK L+ V + +D + TL E +L+
Sbjct: 149 EFEYLKLLGKGTFGKVILVKE-KATGRYYAMKILKKEVIVAKDEVA-HTLTENRVLQNS- 205
Query: 81 TFEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HP +++ H + Y +F H+ ++ S + +
Sbjct: 206 --RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----------FSEDRARFY 253
Query: 139 TRQMLKGVDFLHSHR-IIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTL 196
+++ +D+LHS + +++RDLK +NL++ + G +KI DFGL K D + + T
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
Y APE+L + YG VD W +G VM EM
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 29/205 (14%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGI--PMSTLREISILKQLDTFEHPN 86
++G G +G V+ G Y K+ VK + G P + L E +++KQL +H
Sbjct: 16 RLGAGQFGEVWM-------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQR 65
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG---LSASKVKELTRQML 143
+VR + V+ Q +Y+I E+++ GS ++ P L+ +K+ ++ Q+
Sbjct: 66 LVRLYAVVTQE--------PIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIA 115
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLTSVVVTLWYRA 200
+G+ F+ IHR+L+ N+L++ KIADFGLA+ +Y + W A
Sbjct: 116 EGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW-TA 174
Query: 201 PEILLNLGYGTPVDIWSIGCVMAEM 225
PE + + D+WS G ++ E+
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEI 199
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 13 NLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLRE 72
+L +D + + +E+ +G GA+G V KA+ + VA+K++ +
Sbjct: 1 SLHMIDYKEIEVEEV--VGRGAFGVVCKAK---WRAKDVAIKQIESESERKAF------- 48
Query: 73 ISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPP-PGL 130
I L+QL HPNIV+ + V L+ E+ + L + + P P
Sbjct: 49 IVELRQLSRVNHPNIVKLYGACLN---------PVCLVMEYAEGGSLYNVLHGAEPLPYY 99
Query: 131 SASKVKELTRQMLKGVDFLHSHR---IIHRDLKPQNLLITRAGG-LKIADFGLAKTFDYD 186
+A+ Q +GV +LHS + +IHRDLKP NLL+ G LKI DFG A D
Sbjct: 100 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ 157
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+T+ + + APE+ Y D++S G ++ E+
Sbjct: 158 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLD 80
+++ L +G G +G V ++ + G Y AMK L+ V + +D + TL E +L+
Sbjct: 10 EFEYLKLLGKGTFGKVILVKE-KATGRYYAMKILKKEVIVAKDEVA-HTLTENRVLQNS- 66
Query: 81 TFEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HP +++ H + Y +F H+ ++ S + +
Sbjct: 67 --RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----------FSEDRARFY 114
Query: 139 TRQMLKGVDFLHSHR-IIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTL 196
+++ +D+LHS + +++RDLK +NL++ + G +KI DFGL K D + T
Sbjct: 115 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 174
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
Y APE+L + YG VD W +G VM EM
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLD 80
+++ L +G G +G V ++ + G Y AMK L+ V + +D + TL E +L+
Sbjct: 11 EFEYLKLLGKGTFGKVILVKE-KATGRYYAMKILKKEVIVAKDEV-AHTLTENRVLQNS- 67
Query: 81 TFEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HP +++ H + Y +F H+ ++ S + +
Sbjct: 68 --RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----------FSEDRARFY 115
Query: 139 TRQMLKGVDFLHSHR-IIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTL 196
+++ +D+LHS + +++RDLK +NL++ + G +KI DFGL K D + T
Sbjct: 116 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 175
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
Y APE+L + YG VD W +G VM EM
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEM 204
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 23 KYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLD 80
+++ L +G G +G V ++ + G Y AMK L+ V + +D + TL E +L+
Sbjct: 9 EFEYLKLLGKGTFGKVILVKE-KATGRYYAMKILKKEVIVAKDEVA-HTLTENRVLQNS- 65
Query: 81 TFEHP--NIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL 138
HP +++ H + Y +F H+ ++ S + +
Sbjct: 66 --RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----------FSEDRARFY 113
Query: 139 TRQMLKGVDFLHSHR-IIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-MMLTSVVVTL 196
+++ +D+LHS + +++RDLK +NL++ + G +KI DFGL K D + T
Sbjct: 114 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 173
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
Y APE+L + YG VD W +G VM EM
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEM 202
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 24/236 (10%)
Query: 1 MYEYSADTIQSLNLDSLDLGDKKYDELC------QIGCGAYGTVFKARDLQNKGNYVAMK 54
M +Y T ++L GD C +IG G++GTV +A + G+ VA+K
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA---EWHGSDVAVK 66
Query: 55 KLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQ--NILSDERYLTVYLIFE 112
L + LRE++I+K+L HPNIV F + Q N+ YL+ ++
Sbjct: 67 ILMEQDFHAERVNEFLREVAIMKRL---RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR 123
Query: 113 HVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHR--IIHRDLKPQNLLITRAG 170
+ + G+ + L + + + KG+++LH+ I+HR+LK NLL+ +
Sbjct: 124 LLHKS-GAREQ------LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY 176
Query: 171 GLKIADFGLAKTFDYDMMLT-SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+K+ DFGL++ + + S T + APE+L + D++S G ++ E+
Sbjct: 177 TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 13 NLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLRE 72
+L +D + + +E+ +G GA+G V KA+ + VA+K++ +
Sbjct: 2 SLHMIDYKEIEVEEV--VGRGAFGVVCKAK---WRAKDVAIKQIESESERKAF------- 49
Query: 73 ISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPP-PGL 130
I L+QL HPNIV+ + V L+ E+ + L + + P P
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACLN---------PVCLVMEYAEGGSLYNVLHGAEPLPYY 100
Query: 131 SASKVKELTRQMLKGVDFLHSHR---IIHRDLKPQNLLITRAGG-LKIADFGLAKTFDYD 186
+A+ Q +GV +LHS + +IHRDLKP NLL+ G LKI DFG A D
Sbjct: 101 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ 158
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+T+ + + APE+ Y D++S G ++ E+
Sbjct: 159 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 27/215 (12%)
Query: 29 QIGCGAYGTVFKAR--DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
++G GA+G VF A +L + + + + +K D RE +L L +H +
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL---QHEH 76
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYM-----------EKCPPPGLSASK 134
IV+F+ V + D + ++FE++ DL ++ E PP L+ S+
Sbjct: 77 IVKFYGVC---VEGD----PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK---TFDYDMMLTS 191
+ + +Q+ G+ +L S +HRDL +N L+ +KI DFG+++ + DY +
Sbjct: 130 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 192 VVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
++ + + PE ++ + T D+WS+G V+ E++
Sbjct: 190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFEHPN 86
++G G +G V+K + N VA+KKL V + + + +EI ++ + +H N
Sbjct: 38 KMGEGGFGVVYKGY-VNN--TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC---QHEN 91
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ--DLGSYMEKCPPPGLSASKVKELTRQMLK 144
+V SD L + ++ D S ++ PP LS ++ +
Sbjct: 92 LVELL-----GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAAN 144
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAP 201
G++FLH + IHRD+K N+L+ A KI+DFGLA+ F +M + +V T Y AP
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 202 EILLNLGYGTP-VDIWSIGCVMAEMWRLVP 230
E L G TP DI+S G V+ E+ +P
Sbjct: 205 EAL--RGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 20 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 71
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C +SA + + Q+ +
Sbjct: 72 VQLLGVC-------TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 185 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 236
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 237 -----------------CPEKVYELMRACWQWNPSDRPSFAE 261
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 20 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 71
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C +SA + + Q+ +
Sbjct: 72 VQLLGVC-------TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 185 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 236
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 237 -----------------CPEKVYELMRACWQWNPSDRPSFAE 261
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFEHPN 86
++G G +G V+K VA+KKL V + + + +EI ++ + +H N
Sbjct: 38 KMGEGGFGVVYKGY---VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC---QHEN 91
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ--DLGSYMEKCPPPGLSASKVKELTRQMLK 144
+V SD L + ++ D S ++ PP LS ++ +
Sbjct: 92 LVELL-----GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAAN 144
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAP 201
G++FLH + IHRD+K N+L+ A KI+DFGLA+ F +M +V T Y AP
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP 204
Query: 202 EILLNLGYGTP-VDIWSIGCVMAEMWRLVP 230
E L G TP DI+S G V+ E+ +P
Sbjct: 205 EAL--RGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 20 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 71
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C +SA + + Q+ +
Sbjct: 72 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 185 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 236
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 237 -----------------CPEKVYELMRACWQWNPSDRPSFAE 261
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 21 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 72
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 73 VQLLGVC-------TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 126 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 185
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 186 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 237
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 238 -----------------CPEKVYELMRACWQWNPSDRPSFAE 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 25 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 76
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C +SA + + Q+ +
Sbjct: 77 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 129
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 190 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 241
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 242 -----------------CPEKVYELMRACWQWNPSDRPSFAE 266
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 20 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 71
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C +SA + + Q+ +
Sbjct: 72 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 185 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 236
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 237 -----------------CPEKVYELMRACWQWNPSDRPSFAE 261
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFEHPN 86
++G G +G V+K VA+KKL V + + + +EI ++ + +H N
Sbjct: 32 KMGEGGFGVVYKGY---VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC---QHEN 85
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ--DLGSYMEKCPPPGLSASKVKELTRQMLK 144
+V SD L + ++ D S ++ PP LS ++ +
Sbjct: 86 LVELL-----GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAAN 138
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAP 201
G++FLH + IHRD+K N+L+ A KI+DFGLA+ F +M +V T Y AP
Sbjct: 139 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP 198
Query: 202 EILLNLGYGTP-VDIWSIGCVMAEMWRLVP 230
E L G TP DI+S G V+ E+ +P
Sbjct: 199 EAL--RGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 51/313 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMS-TLREISILKQLDTFEHP-NI 87
+G GAY V A LQN Y +++ + G S RE+ L Q ++ +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYA----VKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+ FF+ D R+ YL+FE + + ++++K + + + R + +
Sbjct: 77 IEFFE-------DDTRF---YLVFEKLQGGSILAHIQK--QKHFNEREASRVVRDVAAAL 124
Query: 147 DFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVV--------T 195
DFLH+ I HRDLKP+N+L + +KI DF L + T + +
Sbjct: 125 DFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 196 LWYRAPEILLNLG-----YGTPVDIWSIGCVMAEMWRLVPLF---CASTEVEQLKCIFRV 247
Y APE++ Y D+WS+G V+ M P F C + + RV
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRV 244
Query: 248 IGTPSMNEWPENISLMWSSFEQYSKVAF-SAIFMDCCSKANSLLESMLTFNPADRISAAD 306
N+ E+I Q K F + S+A L+ +L + R+SAA
Sbjct: 245 C----QNKLFESI--------QEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQ 292
Query: 307 ALEHPYFKEKENE 319
L+HP+ + + E
Sbjct: 293 VLQHPWVQGQAPE 305
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 25 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 76
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 77 VQLLGVC-------TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 190 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 241
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 242 -----------------CPEKVYELMRACWQWNPSDRPSFAE 266
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 46/283 (16%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 18 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 69
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C +SA + + Q+ +
Sbjct: 70 VQLLGVC-------TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE-NISLM 263
+ D+W+ G ++ E I T M+ +P + S +
Sbjct: 183 AYNKFSIKSDVWAFGVLLWE-----------------------IATYGMSPYPGIDPSQV 219
Query: 264 WSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
+ E+ ++ C K L+ + +NP+DR S A+
Sbjct: 220 YELLEKDYRMERPE---GCPEKVYELMRACWQWNPSDRPSFAE 259
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 34/214 (15%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G G +G K + G + MK+L ++ +E+ + L+E+ +++ L EHPN+++
Sbjct: 18 LGKGCFGQAIKVTHRET-GEVMVMKEL-IRFDEE-TQRTFLKEVKVMRCL---EHPNVLK 71
Query: 90 FFDVIHQNILSDER--YLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
F V+++ D+R ++T Y+ + + S + P S+ + + G+
Sbjct: 72 FIGVLYK----DKRLNFITEYIKGGTLRGIIKSMDSQYP-----WSQRVSFAKDIASGMA 122
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----------------DYDMMLTS 191
+LHS IIHRDL N L+ + +ADFGLA+ D T
Sbjct: 123 YLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT- 181
Query: 192 VVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
VV ++ APE++ Y VD++S G V+ E+
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 25 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 76
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 77 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 189
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 190 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 241
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 242 -----------------CPEKVYELMRACWQWNPSDRPSFAE 266
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 29 QIGCGAYGTVFKA-RDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++GCG +G+V + ++ K VA+K L+ + E +RE I+ QLD +P I
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLD---NPYI 72
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEH-----VDQDLGSYMEKCPPPGLSASKVKELTRQM 142
VR V L L+ E + + L E+ P S V EL Q+
Sbjct: 73 VRLIGVCQAEAL--------MLVMEMAGGGPLHKFLVGKREEIP-----VSNVAELLHQV 119
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY-DMMLTSVVVTLW---Y 198
G+ +L +HRDL +N+L+ KI+DFGL+K D T+ W +
Sbjct: 120 SMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 179
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAE 224
APE + + + D+WS G M E
Sbjct: 180 YAPECINFRKFSSRSDVWSYGVTMWE 205
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 30 IGCGAYGTV-FKARDLQN--KGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G G +G V D N G VA+K L+ + REI IL+ T H +
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ-LRSGWQREIEILR---TLYHEH 71
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
IV++ + D+ +V L+ E+V LGS + P + +++ +Q+ +G+
Sbjct: 72 IVKY-----KGCCEDQGEKSVQLVMEYVP--LGSLRDYLPRHCVGLAQLLLFAQQICEGM 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAP 201
+LH+ IHR L +N+L+ +KI DFGLAK Y + WY AP
Sbjct: 125 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-AP 183
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E L + D+WS G + E+
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYEL 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 33 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 84
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 85 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 137
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 138 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 197
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 198 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 249
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 250 -----------------CPEKVYELMRACWQWNPSDRPSFAE 274
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 30 IGCGAYGTV-FKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G G +G V D N G VA+K L+ + REI IL+ T H +
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ-LRSGWQREIEILR---TLYHEH 72
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
IV++ + D+ +V L+ E+V LGS + P + +++ +Q+ +G+
Sbjct: 73 IVKY-----KGCCEDQGEKSVQLVMEYVP--LGSLRDYLPRHCVGLAQLLLFAQQICEGM 125
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAP 201
+LH+ IHR L +N+L+ +KI DFGLAK Y + WY AP
Sbjct: 126 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-AP 184
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E L + D+WS G + E+
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYEL 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 25 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 76
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 77 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 190 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 241
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 242 -----------------CPEKVYELMRACWQWNPSDRPSFAE 266
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTL 70
+LN+ L L L IG G +G V +GN VA+K ++ D + L
Sbjct: 8 ALNMKELKL-------LQTIGKGEFGDVMLG---DYRGNKVAVKCIK----NDATAQAFL 53
Query: 71 REISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPG 129
E S++ QL H N+V+ VI E +Y++ E++ + L Y+
Sbjct: 54 AEASVMTQL---RHSNLVQLLGVIV------EEKGGLYIVTEYMAKGSLVDYLRSRGRSV 104
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
L + + + + + +++L + +HRDL +N+L++ K++DFGL K
Sbjct: 105 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 164
Query: 190 TSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ V + APE L + T D+WS G ++ E++
Sbjct: 165 GKLPVK--WTAPEALREAAFSTKSDVWSFGILLWEIY 199
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 22 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 73
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 74 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 187 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 238
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 239 -----------------CPEKVYELMRACWQWNPSDRPSFAE 263
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 22 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 73
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 74 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 187 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 238
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 239 -----------------CPEKVYELMRACWQWNPSDRPSFAE 263
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 25 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 76
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 77 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 190 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 241
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 242 -----------------CPEKVYELMRACWQWNPSDRPSFAE 266
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 20 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 71
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 72 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 185 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 236
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 237 -----------------CPEKVYELMRACWQWNPSDRPSFAE 261
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 20 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 71
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 72 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 185 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 236
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 237 -----------------CPEKVYELMRACWQWNPSDRPSFAE 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 24 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 75
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 76 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 128
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 129 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 188
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 189 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 240
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 241 -----------------CPEKVYELMRACWQWNPSDRPSFAE 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 22 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 73
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 74 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL 186
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 187 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 238
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 239 -----------------CPEKVYELMRACWQWNPSDRPSFAE 263
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 21 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 72
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 73 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 126 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL 185
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 186 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 237
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 238 -----------------CPEKVYELMRACWQWNPSDRPSFAE 262
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 36/223 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKL-------NEDGIPMSTLREISILKQLDTF 82
+G GA+G V +A G A+ K+ VK+ +E MS L+ +S L Q
Sbjct: 54 LGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ---- 108
Query: 83 EHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL------------ 130
H NIV +T Y + DL +++ + PPGL
Sbjct: 109 -HENIVNLLGACTHG--GPVLVITEYCCY----GDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 131 --SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-- 186
S+ + + Q+ +G+ FL S IHRD+ +N+L+T KI DFGLA+ D
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 187 -MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
++ + + + + APE + + Y D+WS G ++ E++ L
Sbjct: 222 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 264
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 26/207 (12%)
Query: 30 IGCGAYGTV-FKARDLQNKGN--YVAMKKLRVKLNEDGIPMST---LREISILKQLDTFE 83
+G G +G V D N G VA+K L+ D P +EI IL+ T
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA----DAGPQHRSGWKQEIDILR---TLY 91
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H +I+++ + D ++ L+ E+V LGS + P + +++ +Q+
Sbjct: 92 HEHIIKY-----KGCCEDAGAASLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQIC 144
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-----DYDMMLTSVVVTLWY 198
+G+ +LH+ IHRDL +N+L+ +KI DFGLAK Y + WY
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY 204
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEM 225
APE L + D+WS G + E+
Sbjct: 205 -APECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFEHPN 86
+ G G +G V+K + N VA+KKL V + + + +EI + + +H N
Sbjct: 29 KXGEGGFGVVYKGY-VNN--TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKC---QHEN 82
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ--DLGSYMEKCPPPGLSASKVKELTRQMLK 144
+V SD L + ++ D S ++ PP LS ++ +
Sbjct: 83 LVELL-----GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LSWHXRCKIAQGAAN 135
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRAP 201
G++FLH + IHRD+K N+L+ A KI+DFGLA+ F + + +V T Y AP
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 202 EILLNLGYGTP-VDIWSIGCVMAEMWRLVP 230
E L G TP DI+S G V+ E+ +P
Sbjct: 196 EAL--RGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 43/220 (19%)
Query: 26 ELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTF--- 82
+L +IG GAYG+V K + G +A+K++R ++E + +L LD
Sbjct: 26 DLGEIGRGAYGSVNKMVH-KPSGQIMAVKRIRSTVDEK-------EQKQLLMDLDVVMRS 77
Query: 83 -EHPNIVRFFDVIHQN--------ILS---DERYLTVYLIFEHVDQDLGSYMEKCPPPGL 130
+ P IV+F+ + + ++S D+ Y VY + + V +
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV---------------I 122
Query: 131 SASKVKELTRQMLKGVDFLHSH-RIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
+ ++T +K ++ L + +IIHRD+KP N+L+ R+G +K+ DFG++ +
Sbjct: 123 PEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182
Query: 190 TSVVVTLWYRAPEIL----LNLGYGTPVDIWSIGCVMAEM 225
T Y APE + GY D+WS+G + E+
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 30 IGCGAYGTVFKARDLQNKGNY---VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V+K + G VA+K L+ E + L E I+ Q F H N
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ-RVDFLGEAGIMGQ---FSHHN 107
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
I+R VI +Y + +I E+++ + S ++ + R + G+
Sbjct: 108 IIRLEGVI-------SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L + +HRDL +N+L+ K++DFGL++ + D T + + + APE
Sbjct: 161 KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G VM E+
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEV 243
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 29 QIGCGAYGTVFKARDLQ----NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
++G +G V+K + VA+K L+ K +G R ++L+ +H
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK--AEGPLREEFRHEAMLRA--RLQH 88
Query: 85 PNIVRFFDVIHQN-----ILS--DERYLTVYLIFEHVDQDLGSYME-KCPPPGLSASKVK 136
PN+V V+ ++ I S L +L+ D+GS + + L
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLTSVV 193
L Q+ G+++L SH ++H+DL +N+L+ +KI+D GL + DY +L + +
Sbjct: 149 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ + + APE ++ + DIWS G V+ E++
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTL 70
+LN+ L L L IG G +G V +GN VA+K ++ D + L
Sbjct: 2 ALNMKELKL-------LQTIGKGEFGDVMLG---DYRGNKVAVKCIK----NDATAQAFL 47
Query: 71 REISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPG 129
E S++ QL H N+V+ VI E +Y++ E++ + L Y+
Sbjct: 48 AEASVMTQL---RHSNLVQLLGVIV------EEKGGLYIVTEYMAKGSLVDYLRSRGRSV 98
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
L + + + + + +++L + +HRDL +N+L++ K++DFGL K
Sbjct: 99 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 158
Query: 190 TSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ V + APE L + T D+WS G ++ E++
Sbjct: 159 GKLPVK--WTAPEALREKKFSTKSDVWSFGILLWEIY 193
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTL 70
+LN+ L L L IG G +G V +GN VA+K ++ D + L
Sbjct: 17 ALNMKELKL-------LQTIGKGEFGDVMLG---DYRGNKVAVKCIK----NDATAQAFL 62
Query: 71 REISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPG 129
E S++ QL H N+V+ VI E +Y++ E++ + L Y+
Sbjct: 63 AEASVMTQL---RHSNLVQLLGVIV------EEKGGLYIVTEYMAKGSLVDYLRSRGRSV 113
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
L + + + + + +++L + +HRDL +N+L++ K++DFGL K
Sbjct: 114 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 173
Query: 190 TSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ V + APE L + T D+WS G ++ E++
Sbjct: 174 GKLPVK--WTAPEALREKKFSTKSDVWSFGILLWEIY 208
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 46/283 (16%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 18 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 69
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C +SA + + Q+ +
Sbjct: 70 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVT--LWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ D + + APE L
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESL 182
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE-NISLM 263
+ D+W+ G ++ E I T M+ +P + S +
Sbjct: 183 AYNKFSIKSDVWAFGVLLWE-----------------------IATYGMSPYPGIDPSQV 219
Query: 264 WSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
+ E+ ++ C K L+ + +NP+DR S A+
Sbjct: 220 YELLEKDYRMERPE---GCPEKVYELMRACWQWNPSDRPSFAE 259
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 29 QIGCGAYGTVFKARDLQ----NKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEH 84
++G +G V+K + VA+K L+ K +G R ++L+ +H
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK--AEGPLREEFRHEAMLRA--RLQH 71
Query: 85 PNIVRFFDVIHQN-----ILS--DERYLTVYLIFEHVDQDLGSYME-KCPPPGLSASKVK 136
PN+V V+ ++ I S L +L+ D+GS + + L
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLTSVV 193
L Q+ G+++L SH ++H+DL +N+L+ +KI+D GL + DY +L + +
Sbjct: 132 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ + + APE ++ + DIWS G V+ E++
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTL 70
+LN+ L L L IG G +G V +GN VA+K ++ D + L
Sbjct: 189 ALNMKELKL-------LQTIGKGEFGDVMLG---DYRGNKVAVKCIK----NDATAQAFL 234
Query: 71 REISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPG 129
E S++ QL H N+V+ VI E +Y++ E++ + L Y+
Sbjct: 235 AEASVMTQL---RHSNLVQLLGVIV------EEKGGLYIVTEYMAKGSLVDYLRSRGRSV 285
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
L + + + + + +++L + +HRDL +N+L++ K++DFGL K
Sbjct: 286 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 345
Query: 190 TSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ V + APE L + T D+WS G ++ E++
Sbjct: 346 GKLPVK--WTAPEALREKKFSTKSDVWSFGILLWEIY 380
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 64/319 (20%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
+G + ++ L +G GAYG VF R + + G AMK L++ +I+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMK--------------VLKKATIV 96
Query: 77 KQLDTFEHPNIVR----------FFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKC 125
++ T EH R F +H ++ + ++LI ++++ +L +++ +
Sbjct: 97 QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK---LHLILDYINGGELFTHLSQR 153
Query: 126 PPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-- 183
+ +V+ +++ ++ LH II+RD+K +N+L+ G + + DFGL+K F
Sbjct: 154 ER--FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA 211
Query: 184 DYDMMLTSVVVTLWYRAPEILL--NLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL 241
D T+ Y AP+I+ + G+ VD WS+G +M E+ F E
Sbjct: 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 271
Query: 242 KCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADR 301
I R I S +P+ +S + A L++ +L +P R
Sbjct: 272 AEISRRI-LKSEPPYPQEMSAL----------------------AKDLIQRLLMKDPKKR 308
Query: 302 IS-----AADALEHPYFKE 315
+ A + EH +F++
Sbjct: 309 LGCGPRDADEIKEHLFFQK 327
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 30 IGCGAYGTV-FKARDLQNKGN--YVAMKKLRVKLNEDGIPMST---LREISILKQLDTFE 83
+G G +G V D N G VA+K L+ D P +EI IL+ T
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA----DCGPQHRSGWKQEIDILR---TLY 74
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H +I+++ + D+ ++ L+ E+V LGS + P + +++ +Q+
Sbjct: 75 HEHIIKY-----KGCCEDQGEKSLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQIC 127
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWY 198
+G+ +LHS IHR+L +N+L+ +KI DFGLAK Y + WY
Sbjct: 128 EGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEM 225
APE L + D+WS G + E+
Sbjct: 188 -APECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 227 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 278
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C +SA + + Q+ +
Sbjct: 279 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 331
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHR+L +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 332 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 391
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 392 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 443
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 444 -----------------CPEKVYELMRACWQWNPSDRPSFAE 468
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 128 PGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM 187
PG + T Q++ G++ LH II+RDLKP+N+L+ G ++I+D GLA
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 188 MLT-SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T T + APE+LL Y VD +++G + EM
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 128 PGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM 187
PG + T Q++ G++ LH II+RDLKP+N+L+ G ++I+D GLA
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 188 MLT-SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T T + APE+LL Y VD +++G + EM
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 114/256 (44%), Gaps = 35/256 (13%)
Query: 3 EYSADTIQSL----NLDSLDLGDKKYDELCQIGCGAYGTV-FKARDLQNKGNYVAMKKLR 57
E +A+TI N D + L D ++ L +G G++G V R ++ V + K
Sbjct: 320 EKTANTISKFDNNGNRDRMKLTD--FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD 377
Query: 58 VKLNEDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD-- 115
V + +D + T+ E +L P F +H + +R +Y + E+V+
Sbjct: 378 VVIQDDDV-ECTMVEKRVLAL------PGKPPFLTQLHSCFQTMDR---LYFVMEYVNGG 427
Query: 116 ------QDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRA 169
Q +G + E P A+++ G+ FL S II+RDLK N+++
Sbjct: 428 DLMYHIQQVGRFKE--PHAVFYAAEI-------AIGLFFLQSKGIIYRDLKLDNVMLDSE 478
Query: 170 GGLKIADFGLAKTFDYDMMLTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
G +KIADFG+ K +D + T T Y APEI+ YG VD W+ G ++ EM
Sbjct: 479 GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538
Query: 229 VPLFCASTEVEQLKCI 244
F E E + I
Sbjct: 539 QAPFEGEDEDELFQSI 554
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 128 PGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM 187
PG + T Q++ G++ LH II+RDLKP+N+L+ G ++I+D GLA
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 188 MLT-SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T T + APE+LL Y VD +++G + EM
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 128 PGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM 187
PG + T Q++ G++ LH II+RDLKP+N+L+ G ++I+D GLA
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 188 MLT-SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
T T + APE+LL Y VD +++G + EM
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 46/283 (16%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G +G V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 18 KLGGGQFGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 69
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C +SA + + Q+ +
Sbjct: 70 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE-NISLM 263
+ D+W+ G ++ E I T M+ +P + S +
Sbjct: 183 AYNKFSIKSDVWAFGVLLWE-----------------------IATYGMSPYPGIDPSQV 219
Query: 264 WSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
+ E+ ++ C K L+ + +NP+DR S A+
Sbjct: 220 YELLEKDYRMERPE---GCPEKVYELMRACWQWNPSDRPSFAE 259
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 31/233 (13%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFK--ARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLR 71
D ++ +K L ++G G++G V++ ARD+ KG A ++ VK +NE ++LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGE--AETRVAVKTVNES----ASLR 62
Query: 72 E-ISILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP 127
E I L + + F ++VR V+ + + L V + H DL SY+ P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKG----QPTLVVMELMAH--GDLKSYLRSLRP 116
Query: 128 -----PGLSASKVKELTR---QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL 179
PG ++E+ + ++ G+ +L++ + +HRDL +N ++ +KI DFG+
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 180 AKTF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
+ DY ++ + + APE L + + T D+WS G V+ E+ L
Sbjct: 177 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 91
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 92 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA-----KTFDYDMMLTSVVVTLWYR 199
G+ FL S + +HRDL +N ++ +K+ADFGLA K FD T + + +
Sbjct: 143 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
A E L + T D+WS G ++ E+
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 108
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 109 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGLA+ + D + + + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 29 QIGCGAYGTVFKA-RDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++GCG +G+V + ++ K VA+K L+ + E +RE I+ QLD +P I
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLD---NPYI 398
Query: 88 VRFFDVIHQNILSDERYLTVYLIFE-----HVDQDLGSYMEKCPPPGLSASKVKELTRQM 142
VR V L L+ E + + L E+ P S V EL Q+
Sbjct: 399 VRLIGVCQAEAL--------MLVMEMAGGGPLHKFLVGKREEIP-----VSNVAELLHQV 445
Query: 143 LKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDY-DMMLTSVVVTLW---Y 198
G+ +L +HR+L +N+L+ KI+DFGL+K D T+ W +
Sbjct: 446 SMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 505
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAE 224
APE + + + D+WS G M E
Sbjct: 506 YAPECINFRKFSSRSDVWSYGVTMWE 531
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 152
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 153 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 203
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA-----KTFDYDMMLTSVVVTLWYR 199
G+ FL S + +HRDL +N ++ +K+ADFGLA K FD T + + +
Sbjct: 204 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
A E L + T D+WS G ++ E+
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWEL 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 93
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 94 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 144
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA-----KTFDYDMMLTSVVVTLWYR 199
G+ FL S + +HRDL +N ++ +K+ADFGLA K FD T + + +
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
A E L + T D+WS G ++ E+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 93
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 94 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 144
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA-----KTFDYDMMLTSVVVTLWYR 199
G+ FL S + +HRDL +N ++ +K+ADFGLA K FD T + + +
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
A E L + T D+WS G ++ E+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 94
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 95 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 145
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA-----KTFDYDMMLTSVVVTLWYR 199
G+ FL S + +HRDL +N ++ +K+ADFGLA K FD T + + +
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
A E L + T D+WS G ++ E+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 94
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H D E P VK+L Q+ K
Sbjct: 95 LSLLGIC---LRSEGSPLVVLPYMKHGDLRNFIRNETHNP------TVKDLIGFGLQVAK 145
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA-----KTFDYDMMLTSVVVTLWYR 199
G+ FL S + +HRDL +N ++ +K+ADFGLA K FD T + + +
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
A E L + T D+WS G ++ E+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 98
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 99 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 149
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA-----KTFDYDMMLTSVVVTLWYR 199
G+ FL S + +HRDL +N ++ +K+ADFGLA K FD T + + +
Sbjct: 150 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
A E L + T D+WS G ++ E+
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWEL 235
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 29 QIGCGAYGTVFKAR-----DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
++G GA+G VF A Q+K VA+K L K + RE +L L +
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDK-MLVAVKAL--KEASESARQDFQREAELLTML---Q 78
Query: 84 HPNIVRFFDVIHQN-----ILSDERY--LTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
H +IVRFF V + + R+ L +L D L + E P L ++
Sbjct: 79 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVV 193
+ Q+ G+ +L +HRDL +N L+ + +KI DFG+++ + DY + +
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ + + PE +L + T D+WS G V+ E++
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 29 QIGCGAYGTVFKAR-----DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
++G GA+G VF A Q+K VA+K L K + RE +L L +
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDK-MLVAVKAL--KEASESARQDFQREAELLTML---Q 101
Query: 84 HPNIVRFFDVIHQN-----ILSDERY--LTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
H +IVRFF V + + R+ L +L D L + E P L ++
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVV 193
+ Q+ G+ +L +HRDL +N L+ + +KI DFG+++ + DY + +
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ + + PE +L + T D+WS G V+ E++
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 30 IGCGAYGTV-FKARDLQNKGN--YVAMKKLRVKLNEDGIPMST---LREISILKQLDTFE 83
+G G +G V D N G VA+K L+ D P +EI IL+ T
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA----DCGPQHRSGWKQEIDILR---TLY 74
Query: 84 HPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
H +I+++ + D+ ++ L+ E+V LGS + P + +++ +Q+
Sbjct: 75 HEHIIKY-----KGCCEDQGEKSLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQIC 127
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWY 198
+G+ +LH+ IHR+L +N+L+ +KI DFGLAK Y + WY
Sbjct: 128 EGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEM 225
APE L + D+WS G + E+
Sbjct: 188 -APECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 29 QIGCGAYGTVFKAR-----DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFE 83
++G GA+G VF A Q+K VA+K L K + RE +L L +
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDK-MLVAVKAL--KEASESARQDFQREAELLTML---Q 72
Query: 84 HPNIVRFFDVIHQN-----ILSDERY--LTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK 136
H +IVRFF V + + R+ L +L D L + E P L ++
Sbjct: 73 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 137 ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK---TFDYDMMLTSVV 193
+ Q+ G+ +L +HRDL +N L+ + +KI DFG+++ + DY + +
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 194 VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+ + + PE +L + T D+WS G V+ E++
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 79
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 80 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 131
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEV 214
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 108
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 109 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 161 KYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 5 SADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDG 64
+A + L S ++ K L ++G G +G V G + + +K+ ++G
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEG 59
Query: 65 IPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQD-LGSYME 123
MS I K + H +V+ + V + +++I E++ L +Y+
Sbjct: 60 -SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ-------RPIFIITEYMANGCLLNYLR 111
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
+ ++ E+ + + + +++L S + +HRDL +N L+ G +K++DFGL++
Sbjct: 112 EMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
Query: 184 DYDMMLTSVVVTLWYR--APEILLNLGYGTPVDIWSIGCVMAEMWRL 228
D +SV R PE+L+ + + DIW+ G +M E++ L
Sbjct: 171 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 224 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 275
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 276 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 328
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHR+L +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 329 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 388
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 389 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 440
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 441 -----------------CPEKVYELMRACWQWNPSDRPSFAE 465
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 96
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 97 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 148
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 149 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEV 231
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V++ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 266 KLGGGQYGEVYEGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 317
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V R Y+I E + +L Y+ +C ++A + + Q+ +
Sbjct: 318 VQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 370
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHR+L +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 371 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 430
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENISLMW 264
+ D+W+ G + +W + + L ++ ++ E PE
Sbjct: 431 AYNKFSIKSDVWAFGVL---LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----- 482
Query: 265 SSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
C K L+ + +NP+DR S A+
Sbjct: 483 -----------------CPEKVYELMRACWQWNPSDRPSFAE 507
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 5 SADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDG 64
+A + L S ++ K L ++G G +G V G + + +K+ ++G
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEG 59
Query: 65 IPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQD-LGSYME 123
MS I K + H +V+ + V + +++I E++ L +Y+
Sbjct: 60 -SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ-------RPIFIITEYMANGCLLNYLR 111
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
+ ++ E+ + + + +++L S + +HRDL +N L+ G +K++DFGL++
Sbjct: 112 EMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
Query: 184 DYDMMLTSVVVTLWYR--APEILLNLGYGTPVDIWSIGCVMAEMWRL 228
D +SV R PE+L+ + + DIW+ G +M E++ L
Sbjct: 171 LDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 106
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 107 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 158
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 159 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 218
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEV 241
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 108
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 109 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 39/245 (15%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREIS 74
LD D K+ ++ IG G +G V KAR ++ G + A+K+++ ++D E+
Sbjct: 12 LDWNDIKFQDV--IGEGNFGQVLKAR-IKKDGLRMDAAIKRMKEYASKDD-HRDFAGELE 67
Query: 75 ILKQLDTFEHPNIVRFFDVI-HQNILSDERYLTVYLIFEHVDQ-DLGSYMEKC------P 126
+L +L HPNI+ H+ L YL E+ +L ++ K P
Sbjct: 68 VLCKLG--HHPNIINLLGACEHRGYL--------YLAIEYAPHGNLLDFLRKSRVLETDP 117
Query: 127 PPGLSASKVKELTRQML--------KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFG 178
++ S L+ Q L +G+D+L + IHRDL +N+L+ KIADFG
Sbjct: 118 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG 177
Query: 179 LAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPL----FCA 234
L++ + + T + + + A E L Y T D+WS G + +W +V L +C
Sbjct: 178 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL---LWEIVSLGGTPYCG 234
Query: 235 STEVE 239
T E
Sbjct: 235 MTCAE 239
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 31/242 (12%)
Query: 13 NLDSLDLGDKKYDELCQIGCGAYGTV-FKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR 71
N D + L D ++ L +G G++G V R ++ V + K V + +D + T+
Sbjct: 13 NRDRMKLTD--FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVE-CTMV 69
Query: 72 EISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVD--------QDLGSYME 123
E +L P F +H + +R +Y + E+V+ Q +G + E
Sbjct: 70 EKRVLAL------PGKPPFLTQLHSCFQTMDR---LYFVMEYVNGGDLMYHIQQVGRFKE 120
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
P A+++ G+ FL S II+RDLK N+++ G +KIADFG+ K
Sbjct: 121 --PHAVFYAAEIA-------IGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171
Query: 184 DYDMMLTSVVV-TLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLK 242
+D + T T Y APEI+ YG VD W+ G ++ EM F E E +
Sbjct: 172 IWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 231
Query: 243 CI 244
I
Sbjct: 232 SI 233
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 108
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 109 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 108
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 109 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 108
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 109 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 30/255 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR----EISILKQLDTFEHP 85
+G G +G V KA KG + VK+ ++ S LR E ++LKQ++ HP
Sbjct: 31 LGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN---HP 86
Query: 86 NIVRFFDVIHQN-----ILSDERYLTVYLIFEHVDQDLGSYM-----------EKCPPPG 129
++++ + Q+ I+ +Y ++ + Y+ +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYD 186
L+ + Q+ +G+ +L +++HRDL +N+L+ +KI+DFGL++ D
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
+ + + + + A E L + Y T D+WS G + +W +V L + +F
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL---LWEIVTLGGNPYPGIPPERLFN 263
Query: 247 VIGTPSMNEWPENIS 261
++ T E P+N S
Sbjct: 264 LLKTGHRMERPDNCS 278
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 108
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E+++ L S++ K + ++ + R + G+
Sbjct: 109 IRLEGVVTKS-------KPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL + + D + + + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 39/245 (15%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREIS 74
LD D K+ ++ IG G +G V KAR ++ G + A+K+++ ++D E+
Sbjct: 22 LDWNDIKFQDV--IGEGNFGQVLKAR-IKKDGLRMDAAIKRMKEYASKDD-HRDFAGELE 77
Query: 75 ILKQLDTFEHPNIVRFFDVI-HQNILSDERYLTVYLIFEHVDQ-DLGSYMEKC------P 126
+L +L HPNI+ H+ L YL E+ +L ++ K P
Sbjct: 78 VLCKLG--HHPNIINLLGACEHRGYL--------YLAIEYAPHGNLLDFLRKSRVLETDP 127
Query: 127 PPGLSASKVKELTRQML--------KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFG 178
++ S L+ Q L +G+D+L + IHRDL +N+L+ KIADFG
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG 187
Query: 179 LAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPL----FCA 234
L++ + + T + + + A E L Y T D+WS G + +W +V L +C
Sbjct: 188 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL---LWEIVSLGGTPYCG 244
Query: 235 STEVE 239
T E
Sbjct: 245 MTCAE 249
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 15/224 (6%)
Query: 5 SADTIQSLNLDSL---DLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLN 61
+++T+QS D + + L ++G G+YG VFK R ++ G A+K+
Sbjct: 37 ASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKED-GRLYAVKRSMSPFR 95
Query: 62 EDGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY 121
L E+ +++ +HP VR + + YL L + Q ++
Sbjct: 96 GPKDRARKLAEVGSHEKVG--QHPCCVRLEQAWEEGGI---LYLQTELCGPSLQQHCEAW 150
Query: 122 MEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P ++V R L + LHS ++H D+KP N+ + G K+ DFGL
Sbjct: 151 GASLP-----EAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLV 205
Query: 182 TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
Y APE LL YGT D++S+G + E+
Sbjct: 206 ELGTAGAGEVQEGDPRYMAPE-LLQGSYGTAADVFSLGLTILEV 248
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 31/233 (13%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFK--ARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLR 71
D ++ +K L ++G G++G V++ ARD+ KG A ++ VK +NE ++LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGE--AETRVAVKTVNES----ASLR 62
Query: 72 E-ISILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP 127
E I L + + F ++VR V+ + + L V + H DL SY+ P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKG----QPTLVVMELMAH--GDLKSYLRSLRP 116
Query: 128 -----PGLSASKVKELTR---QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL 179
PG ++E+ + ++ G+ +L++ + +HR+L +N ++ +KI DFG+
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGM 176
Query: 180 AKTF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
+ DY ++ + + APE L + + T D+WS G V+ E+ L
Sbjct: 177 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKAR--DLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+D+ K +E+ IG G +G V + R K + VA+K L+ E L E S
Sbjct: 11 IDVSYVKIEEV--IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ-RREFLSEAS 67
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
I+ Q FEHPNI+R V+ + + V ++ E ++ + + +
Sbjct: 68 IMGQ---FEHPNIIRLEGVVTNS-------MPVMILTEFMENGALDSFLRLNDGQFTVIQ 117
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD---YDMMLTS 191
+ + R + G+ +L +HRDL +N+L+ K++DFGL++ + D TS
Sbjct: 118 LVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTS 177
Query: 192 VV---VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ + + + APE + + + D WS G VM E+
Sbjct: 178 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 214
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 31/233 (13%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFK--ARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLR 71
D ++ +K L ++G G++G V++ ARD+ KG A ++ VK +NE ++LR
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGE--AETRVAVKTVNES----ASLR 63
Query: 72 E-ISILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP 127
E I L + + F ++VR V+ + + L V + H DL SY+ P
Sbjct: 64 ERIEFLNEASVMKGFTCHHVVRLLGVVSKG----QPTLVVMELMAH--GDLKSYLRSLRP 117
Query: 128 -----PGLSASKVKELTR---QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL 179
PG ++E+ + ++ G+ +L++ + +HR+L +N ++ +KI DFG+
Sbjct: 118 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGM 177
Query: 180 AKTF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
+ DY ++ + + APE L + + T D+WS G V+ E+ L
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 230
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 31/221 (14%)
Query: 27 LCQIGCGAYGTVFK--ARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLRE-ISILKQ---L 79
L ++G G++G V++ ARD+ KG A ++ VK +NE ++LRE I L + +
Sbjct: 21 LRELGQGSFGMVYEGNARDII-KGE--AETRVAVKTVNES----ASLRERIEFLNEASVM 73
Query: 80 DTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP-----PGLSASK 134
F ++VR V+ + + L V + H DL SY+ P PG
Sbjct: 74 KGFTCHHVVRLLGVVSKG----QPTLVVMELMAH--GDLKSYLRSLRPEAENNPGRPPPT 127
Query: 135 VKELTR---QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMM 188
++E+ + ++ G+ +L++ + +HRDL +N ++ +KI DFG+ + DY
Sbjct: 128 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 187
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
++ + + APE L + + T D+WS G V+ E+ L
Sbjct: 188 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 228
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 79
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E ++ L S++ K + ++ + R + G+
Sbjct: 80 IRLEGVVTKS-------KPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 131
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEV 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 30/255 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR----EISILKQLDTFEHP 85
+G G +G V KA KG + VK+ ++ S LR E ++LKQ++ HP
Sbjct: 31 LGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN---HP 86
Query: 86 NIVRFFDVIHQN-----ILSDERYLTVYLIFEHVDQDLGSYM-----------EKCPPPG 129
++++ + Q+ I+ +Y ++ + Y+ +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYD 186
L+ + Q+ +G+ +L +++HRDL +N+L+ +KI+DFGL++ D
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
+ + + + + A E L + Y T D+WS G + +W +V L + +F
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL---LWEIVTLGGNPYPGIPPERLFN 263
Query: 247 VIGTPSMNEWPENIS 261
++ T E P+N S
Sbjct: 264 LLKTGHRMERPDNCS 278
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 31/233 (13%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFK--ARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLR 71
D ++ +K L ++G G++G V++ ARD+ KG A ++ VK +NE ++LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGE--AETRVAVKTVNES----ASLR 62
Query: 72 E-ISILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP 127
E I L + + F ++VR V+ + + L V + H DL SY+ P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKG----QPTLVVMELMAH--GDLKSYLRSLRP 116
Query: 128 -----PGLSASKVKELTR---QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL 179
PG ++E+ + ++ G+ +L++ + +HRDL +N ++ +KI DFG+
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 180 AKTF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
+ D ++ + + APE L + + T D+WS G V+ E+ L
Sbjct: 177 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 33/234 (14%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFK--ARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLR 71
D ++ +K L ++G G++G V++ ARD+ KG A ++ VK +NE ++LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGE--AETRVAVKTVNES----ASLR 62
Query: 72 E-ISILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP 127
E I L + + F ++VR V+ + + L V + H DL SY+ P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKG----QPTLVVMELMAH--GDLKSYLRSLRP 116
Query: 128 -----PGLSASKVKELTR---QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL 179
PG ++E+ + ++ G+ +L++ + +HRDL +N ++ +KI DFG+
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 180 AK----TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
+ T Y ++ W APE L + + T D+WS G V+ E+ L
Sbjct: 177 TRDIYETAYYRKGGKGLLPVRWM-APESLKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 31/233 (13%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFK--ARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLR 71
D ++ +K L ++G G++G V++ ARD+ KG A ++ VK +NE ++LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGE--AETRVAVKTVNES----ASLR 62
Query: 72 E-ISILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP 127
E I L + + F ++VR V+ + + L V + H DL SY+ P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKG----QPTLVVMELMAH--GDLKSYLRSLRP 116
Query: 128 -----PGLSASKVKELTR---QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL 179
PG ++E+ + ++ G+ +L++ + +HRDL +N ++ +KI DFG+
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 180 AKTF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
+ D ++ + + APE L + + T D+WS G V+ E+ L
Sbjct: 177 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 108
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E ++ L S++ K + ++ + R + G+
Sbjct: 109 IRLEGVVTKS-------KPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 161 KYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 31/233 (13%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFK--ARDLQNKGNYVAMKKLRVK-LNEDGIPMSTLR 71
D ++ +K L ++G G++G V++ ARD+ KG A ++ VK +NE ++LR
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGE--AETRVAVKTVNES----ASLR 59
Query: 72 E-ISILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP 127
E I L + + F ++VR V+ + + L V + H DL SY+ P
Sbjct: 60 ERIEFLNEASVMKGFTCHHVVRLLGVVSKG----QPTLVVMELMAH--GDLKSYLRSLRP 113
Query: 128 -----PGLSASKVKELTR---QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGL 179
PG ++E+ + ++ G+ +L++ + +HRDL +N ++ +KI DFG+
Sbjct: 114 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGM 173
Query: 180 AKTF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
+ D ++ + + APE L + + T D+WS G V+ E+ L
Sbjct: 174 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 226
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V+ N VA+K L+ P S L E I+K+L +H +V
Sbjct: 16 RLGNGQFGEVWMG--TWNGNTKVAIKTLKPGTMS---PESFLEEAQIMKKL---KHDKLV 67
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ + V+ + +Y++ E++++ L +++ L + ++ Q+ G+
Sbjct: 68 QLYAVVSEE--------PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAPEILL 205
++ IHRDL+ N+L+ KIADFGLA+ + + + + APE L
Sbjct: 120 YIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 179
Query: 206 NLGYGTPVDIWSIGCVMAEM 225
+ D+WS G ++ E+
Sbjct: 180 YGRFTIKSDVWSFGILLTEL 199
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 17/223 (7%)
Query: 9 IQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMS 68
++ +L L + + +G G +G V+K R G VA+K+L+ + + G
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGR--LADGTLVAVKRLKEERXQGG---- 78
Query: 69 TLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTV-YLIFEHVDQDLGSYMEKCPP 127
L+ + ++ + H N++R + ER L Y+ V L E PP
Sbjct: 79 ELQFQTEVEMISMAVHRNLLRLRGFC---MTPTERLLVYPYMANGSVASCLRERPESQPP 135
Query: 128 PGLSASKVKELTRQMLKGVDFLHSH---RIIHRDLKPQNLLITRAGGLKIADFGLAKTFD 184
L K + + +G+ +LH H +IIHRD+K N+L+ + DFGLAK D
Sbjct: 136 --LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 185 YD--MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
Y + +V T+ + APE L D++ G ++ E+
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 236
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKL-------NEDGIPMSTLREISILKQLDTF 82
+G GA+G V +A G A+ K+ VK+ +E MS L+ +S L Q
Sbjct: 46 LGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ---- 100
Query: 83 EHPNIVRFFDVIHQN--ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
H NIV +L Y + + + + ++K L + +
Sbjct: 101 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ +G+ FL S IHRD+ +N+L+T KI DFGLA+ D ++ + + +
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSL 250
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 46/283 (16%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST-LREISILKQLDTFEHPNI 87
++G G YG V+ + VA+K L+ ED + + L+E +++K++ +HPN+
Sbjct: 39 KLGGGQYGEVYVGV-WKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEI---KHPNL 90
Query: 88 VRFFDVIHQNILSDERYL-TVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ V L Y+ T Y+ + +L Y+ +C ++A + + Q+ +
Sbjct: 91 VQLLGVC---TLEPPFYIVTEYMPY----GNLLDYLRECNREEVTAVVLLYMATQISSAM 143
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK--TFDYDMMLTSVVVTLWYRAPEIL 204
++L IHRDL +N L+ +K+ADFGL++ T D + + APE L
Sbjct: 144 EYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 203
Query: 205 LNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE-NISLM 263
+ D+W+ G ++ E I T M+ +P ++S +
Sbjct: 204 AYNTFSIKSDVWAFGVLLWE-----------------------IATYGMSPYPGIDLSQV 240
Query: 264 WSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADRISAAD 306
+ E+ ++ C K L+ + ++PADR S A+
Sbjct: 241 YDLLEKGYRMEQPE---GCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V R L +K VA+K L+V E L E SI+ Q F+HPNI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPNI 108
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
+R V+ ++ V ++ E ++ L S++ K + ++ + R + G+
Sbjct: 109 IRLEGVVTKS-------KPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGM 160
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAPE 202
+L +HRDL +N+LI K++DFGL++ + D + + + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G V+ E+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKL-------NEDGIPMSTLREISILKQLDTF 82
+G GA+G V +A G A+ K+ VK+ +E MS L+ +S L Q
Sbjct: 54 LGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ---- 108
Query: 83 EHPNIVRFFDVIHQN--ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
H NIV +L Y + + + + ++K L + +
Sbjct: 109 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ +G+ FL S IHRD+ +N+L+T KI DFGLA+ D ++ + + +
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSL 258
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 11 SLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTL 70
L S ++ K L ++G G +G V G + + +K+ ++G MS
Sbjct: 4 GLGYGSWEIDPKDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEG-SMSED 55
Query: 71 REISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQD-LGSYMEKCPPPG 129
I K + H +V+ + V + +++I E++ L +Y+ +
Sbjct: 56 EFIEEAKVMMNLSHEKLVQLYGVCTKQ-------RPIFIITEYMANGCLLNYLREMRHR- 107
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMML 189
++ E+ + + + +++L S + +HRDL +N L+ G +K++DFGL++ D
Sbjct: 108 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 167
Query: 190 TSVVVTLWYR--APEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+SV R PE+L+ + + DIW+ G +M E++ L
Sbjct: 168 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 208
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 30/255 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLR----EISILKQLDTFEHP 85
+G G +G V KA KG + VK+ ++ S LR E ++LKQ++ HP
Sbjct: 31 LGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN---HP 86
Query: 86 NIVRFFDVIHQN-----ILSDERYLTVYLIFEHVDQDLGSYM-----------EKCPPPG 129
++++ + Q+ I+ +Y ++ + Y+ +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 130 LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYD 186
L+ + Q+ +G+ +L ++HRDL +N+L+ +KI+DFGL++ D
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQLKCIFR 246
+ + + + + A E L + Y T D+WS G + +W +V L + +F
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL---LWEIVTLGGNPYPGIPPERLFN 263
Query: 247 VIGTPSMNEWPENIS 261
++ T E P+N S
Sbjct: 264 LLKTGHRMERPDNCS 278
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 60
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K+L H +V+ + V+ + I Y++ + + + ++G Y
Sbjct: 61 LQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKY------- 110
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DY 185
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+ +Y
Sbjct: 111 -LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ W APE L + D+WS G ++ E+
Sbjct: 170 TARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 30 IGCGAYGTVFKA---RDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
+G GA+GTV+K D +N VA+K LR E+ P + + + P
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLR----ENTSPKANKEILDEAYVMAGVGSPY 80
Query: 87 IVRFFDVIHQNILSDERYLTVY-LIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKG 145
+ R + + + L Y + +HV ++ G L + + Q+ KG
Sbjct: 81 VSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGR---------LGSQDLLNWCMQIAKG 131
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM---LTSVVVTLWYRAPE 202
+ +L R++HRDL +N+L+ +KI DFGLA+ D D V + + A E
Sbjct: 132 MSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+L + D+WS G + E+
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWEL 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKAR--DLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
+D+ K +E+ IG G +G V + R K + VA+K L+ E L E S
Sbjct: 13 IDVSYVKIEEV--IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ-RREFLSEAS 69
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
I+ Q FEHPNI+R V+ + + V ++ E ++ + + +
Sbjct: 70 IMGQ---FEHPNIIRLEGVVTNS-------MPVMILTEFMENGALDSFLRLNDGQFTVIQ 119
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD---YDMMLTS 191
+ + R + G+ +L +HRDL +N+L+ K++DFGL++ + D TS
Sbjct: 120 LVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETS 179
Query: 192 VV---VTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ + + + APE + + + D WS G VM E+
Sbjct: 180 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 216
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 21/204 (10%)
Query: 30 IGCGAYGTVFKARDLQNKGNY---VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V R L+ G VA+K L+V E L E SI+ Q F+HPN
Sbjct: 30 IGAGEFGEVCSGR-LKLPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQ---FDHPN 84
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKG 145
I+ V+ ++ V ++ E+++ L ++++K + ++ + R + G
Sbjct: 85 IIHLEGVVTKS-------KPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAG 136
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAP 201
+ +L +HRDL +N+LI K++DFGL++ + D + + + AP
Sbjct: 137 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + + D+WS G VM E+
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEV 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA----KTFDYDMMLTSVVVTL 196
Q+ +G++FL S + IHRDL +N+L++ +KI DFGLA K DY + + L
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY-VRKGDTRLPL 265
Query: 197 WYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y T D+WS G ++ E++ L
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSL 297
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 102/218 (46%), Gaps = 19/218 (8%)
Query: 14 LDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREI 73
+ S ++ K L ++G G +G V G + + +K+ ++G MS I
Sbjct: 1 MGSWEIDPKDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEG-SMSEDEFI 52
Query: 74 SILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQD-LGSYMEKCPPPGLSA 132
K + H +V+ + V + +++I E++ L +Y+ +
Sbjct: 53 EEAKVMMNLSHEKLVQLYGVCTKQ-------RPIFIITEYMANGCLLNYLREMRHR-FQT 104
Query: 133 SKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV 192
++ E+ + + + +++L S + +HRDL +N L+ G +K++DFGL++ D +SV
Sbjct: 105 QQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 164
Query: 193 VVTLWYR--APEILLNLGYGTPVDIWSIGCVMAEMWRL 228
R PE+L+ + + DIW+ G +M E++ L
Sbjct: 165 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 202
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKAR-DLQNKGNY-VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V R L K + VA+K L+V E L E SI+ Q F+HPN+
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQ---FDHPNV 106
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQD-LGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V V+ R V ++ E ++ L +++ K + ++ + R + G+
Sbjct: 107 VHLEGVV-------TRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLRGIAAGM 158
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD----MMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ K++DFGL++ + D T + + + APE
Sbjct: 159 RYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE 218
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G VM E+
Sbjct: 219 AIQYRKFTSASDVWSYGIVMWEV 241
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 27 LCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
L ++G G +G V G + + +K+ ++G MS I K + H
Sbjct: 9 LKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEK 60
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQD-LGSYMEKCPPPGLSASKVKELTRQMLKG 145
+V+ + V + +++I E++ L +Y+ + ++ E+ + + +
Sbjct: 61 LVQLYGVCTKQ-------RPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEA 112
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYR--APEI 203
+++L S + +HRDL +N L+ G +K++DFGL++ D +SV R PE+
Sbjct: 113 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172
Query: 204 LLNLGYGTPVDIWSIGCVMAEMWRL 228
L+ + + DIW+ G +M E++ L
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSL 197
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 30 IGCGAYGTVFKAR--DLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHP 85
+G GA+G V A + G VA+K L+ K + + + E+ ++ QL + H
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSERE-ALMSELKMMTQLGS--HE 109
Query: 86 NIVRFFDVIHQNILSDERYLTVYLIFEHV-DQDLGSYM----EKCPPPGLSASKVKELTR 140
NIV +++ LS +YLIFE+ DL +Y+ EK + K L
Sbjct: 110 NIV---NLLGACTLSG----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162
Query: 141 -----------------QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
Q+ KG++FL +HRDL +N+L+T +KI DFGLA+
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 184 DYD---MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
D ++ + + + + APE L Y D+WS G ++ E++ L
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 27 LCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
L ++G G +G V G + + +K+ ++G MS I K + H
Sbjct: 13 LKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEK 64
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQD-LGSYMEKCPPPGLSASKVKELTRQMLKG 145
+V+ + V + +++I E++ L +Y+ + ++ E+ + + +
Sbjct: 65 LVQLYGVCTKQ-------RPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEA 116
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYR--APEI 203
+++L S + +HRDL +N L+ G +K++DFGL++ D +SV R PE+
Sbjct: 117 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 176
Query: 204 LLNLGYGTPVDIWSIGCVMAEMWRL 228
L+ + + DIW+ G +M E++ L
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYSL 201
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 30 IGCGAYGTVFKARDL----QNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFE 83
+G GA+G V +A + VA+K L+ L E MS L+ +S L
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN----- 103
Query: 84 HPNIVRFFD--VIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL--------SAS 133
H NIV I L Y + + + S++ P +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLT 190
+ + Q+ KG+ FL S IHRDL +N+L+T KI DFGLA+ D ++
Sbjct: 164 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ + + + APE + N Y D+WS G + E++ L
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 261
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 206
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 206
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 30 IGCGAYGTVFKARDL----QNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFE 83
+G GA+G V +A + VA+K L+ L E MS L+ +S L
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN----- 85
Query: 84 HPNIVRFFDV--IHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL--------SAS 133
H NIV I L Y + + + S++ P +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLT 190
+ + Q+ KG+ FL S IHRDL +N+L+T KI DFGLA+ D ++
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ + + + APE + N Y D+WS G + E++ L
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 39/245 (15%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREIS 74
LD D K+ ++ IG G +G V KAR ++ G + A+K+++ ++D E+
Sbjct: 19 LDWNDIKFQDV--IGEGNFGQVLKAR-IKKDGLRMDAAIKRMKEYASKDD-HRDFAGELE 74
Query: 75 ILKQLDTFEHPNIVRFFDVI-HQNILSDERYLTVYLIFEHVDQ-DLGSYMEKC------P 126
+L +L HPNI+ H+ L YL E+ +L ++ K P
Sbjct: 75 VLCKLG--HHPNIINLLGACEHRGYL--------YLAIEYAPHGNLLDFLRKSRVLETDP 124
Query: 127 PPGLSASKVKELTRQML--------KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFG 178
++ S L+ Q L +G+D+L + IHR+L +N+L+ KIADFG
Sbjct: 125 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFG 184
Query: 179 LAKTFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPL----FCA 234
L++ + + T + + + A E L Y T D+WS G + +W +V L +C
Sbjct: 185 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL---LWEIVSLGGTPYCG 241
Query: 235 STEVE 239
T E
Sbjct: 242 MTCAE 246
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 60
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K+L H +V+ + V+ + I Y++ + + + ++G Y
Sbjct: 61 LQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY------- 110
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DY 185
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+ +Y
Sbjct: 111 -LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ W APE L + D+WS G ++ E+
Sbjct: 170 TARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V+ A NK VA+K ++ MS ++ + T +H +V
Sbjct: 195 KLGAGQFGEVWMA--TYNKHTKVAVKTMKPG------SMSVEAFLAEANVMKTLQHDKLV 246
Query: 89 RFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ V+ + I ++ + + + D GS K P P K+ + + Q+ +G+
Sbjct: 247 KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS---KQPLP-----KLIDFSAQIAEGMA 298
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD--MMLTSVVVTLWYRAPEILL 205
F+ IHRDL+ N+L++ + KIADFGLA+ + + + + APE +
Sbjct: 299 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 358
Query: 206 NLGYGTPVDIWSIGCVMAEM--WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
+ D+WS G ++ E+ + +P + + E ++ + R P PE +
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIP-YPGMSNPEVIRALERGYRMPRPENCPEEL 414
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 60
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K+L H +V+ + V+ + I Y++ + + + ++G Y
Sbjct: 61 LQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKY------- 110
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DY 185
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+ +Y
Sbjct: 111 -LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ W APE L + D+WS G ++ E+
Sbjct: 170 TARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 128
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 129 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
DY ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 237
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 30 IGCGAYGTVFKARDL----QNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFE 83
+G GA+G V +A + VA+K L+ L E MS L+ +S L
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN----- 101
Query: 84 HPNIVRFFD--VIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL--------SAS 133
H NIV I L Y + + + S++ P +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLT 190
+ + Q+ KG+ FL S IHRDL +N+L+T KI DFGLA+ D ++
Sbjct: 162 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ + + + APE + N Y D+WS G + E++ L
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 259
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 30 IGCGAYGTVFKARDL----QNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFE 83
+G GA+G V +A + VA+K L+ L E MS L+ +S L
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN----- 108
Query: 84 HPNIVRFFDV--IHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL--------SAS 133
H NIV I L Y + + + S++ P +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLT 190
+ + Q+ KG+ FL S IHRDL +N+L+T KI DFGLA+ D ++
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ + + + APE + N Y D+WS G + E++ L
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 266
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V+ A NK VA+K ++ MS ++ + T +H +V
Sbjct: 22 KLGAGQFGEVWMA--TYNKHTKVAVKTMKPG------SMSVEAFLAEANVMKTLQHDKLV 73
Query: 89 RFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ V+ + I ++ + + + D GS K P P K+ + + Q+ +G+
Sbjct: 74 KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS---KQPLP-----KLIDFSAQIAEGMA 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD--MMLTSVVVTLWYRAPEILL 205
F+ IHRDL+ N+L++ + KIADFGLA+ + + + + APE +
Sbjct: 126 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 185
Query: 206 NLGYGTPVDIWSIGCVMAEM 225
+ D+WS G ++ E+
Sbjct: 186 FGSFTIKSDVWSFGILLMEI 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 90
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 91 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQNR--HVKDKNIIELVHQVSMGMK 141
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 142 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APE 200
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 90
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 91 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQNR--HVKDKNIIELVHQVSMGMK 141
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 142 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APE 200
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWE 222
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 80
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 81 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMK 131
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 132 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APE 190
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWE 212
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 88
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 89 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQNR--HVKDKNIIELVHQVSMGMK 139
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 140 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APE 198
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWE 220
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILS-DERYLTVYLIFEHVDQDLGSYMEKCPPPGLSAS 133
+L++ H NI+ F + L+ ++ ++ H+ + K
Sbjct: 61 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMK--------- 108
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-------TFDYD 186
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA + ++
Sbjct: 109 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 187 MMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ S+ LW APE++ + Y D+++ G V+ E+
Sbjct: 169 QLSGSI---LWM-APEVIRMQDSNPYSFQSDVYAFGIVLYEL 206
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 266 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 296
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 122 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
DY ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 229
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 123 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
DY ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 231
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 30 IGCGAYGTVFKARDL----QNKGNYVAMKKLR--VKLNEDGIPMSTLREISILKQLDTFE 83
+G GA+G V +A + VA+K L+ L E MS L+ +S L
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN----- 108
Query: 84 HPNIVRFFDV--IHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGL--------SAS 133
H NIV I L Y + + + S++ P +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLT 190
+ + Q+ KG+ FL S IHRDL +N+L+T KI DFGLA+ D ++
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKG 228
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ + + + APE + N Y D+WS G + E++ L
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 266
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 268 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 298
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 119
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 120 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
DY ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 122 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
DY ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 68
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 69 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMK 119
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 120 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APE 178
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWE 200
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 258
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 259 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 289
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 70
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 71 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMK 121
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 122 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APE 180
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWE 202
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 74
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 75 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMK 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-----DYDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 126 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY-APE 184
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWE 206
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 115
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 116 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
DY ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 174 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 224
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 74
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 75 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMK 125
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 126 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APE 184
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWE 206
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 92
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 93 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 143
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKLPVKW 202
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK 215
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 215
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 158 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 217
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 218 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 248
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKARDLQNKGNY---VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G G V R L+ G VA+K L+ E L E SI+ Q F+HPN
Sbjct: 57 IGSGDSGEVCYGR-LRVPGQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQ---FDHPN 111
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
I+R V+ + L+ +T Y+ +D L ++ + + ++ + R + G+
Sbjct: 112 IIRLEGVVTRGRLA--MIVTEYMENGSLDTFLRTHDGQ-----FTIMQLVGMLRGVGAGM 164
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD----MMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ K++DFGL++ + D T + + + APE
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G VM E+
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEV 247
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 96
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 150
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 151 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
DY ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 209 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 258
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILS-DERYLTVYLIFEHVDQDLGSYMEKCPPPGLSAS 133
+L++ H NI+ F + L+ ++ ++ H+ + K
Sbjct: 73 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMK--------- 120
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-------TFDYD 186
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA + ++
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 187 MMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ S+ LW APE++ + Y D+++ G V+ E+
Sbjct: 181 QLSGSI---LWM-APEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V+ A NK VA+K ++ MS ++ + T +H +V
Sbjct: 189 KLGAGQFGEVWMA--TYNKHTKVAVKTMKPG------SMSVEAFLAEANVMKTLQHDKLV 240
Query: 89 RFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ V+ + I ++ + + + D GS K P P K+ + + Q+ +G+
Sbjct: 241 KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS---KQPLP-----KLIDFSAQIAEGMA 292
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILLNL 207
F+ IHRDL+ N+L++ + KIADFGLA+ + + APE +
Sbjct: 293 FIEQRNYIHRDLRAANILVSASLVCKIADFGLAR--------VGAKFPIKWTAPEAINFG 344
Query: 208 GYGTPVDIWSIGCVMAEM--WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPENI 260
+ D+WS G ++ E+ + +P + + E ++ + R P PE +
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRIP-YPGMSNPEVIRALERGYRMPRPENCPEEL 398
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 60
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K++ H +V+ + V+ + I Y++ + + + ++G Y
Sbjct: 61 LQEAQVMKKI---RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY------- 110
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DY 185
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+ +Y
Sbjct: 111 -LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ W APE L + D+WS G ++ E+
Sbjct: 170 TARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 21/225 (9%)
Query: 5 SADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDG 64
S Q L D+ ++ + ++G G +G V+ N VA+K L+
Sbjct: 167 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS-- 222
Query: 65 IPMSTLREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYME 123
P + L+E ++K+L H +V+ + V+ + I Y++ + + + + G Y
Sbjct: 223 -PEAFLQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY-- 276
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+
Sbjct: 277 ------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 184 ---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+Y + W APE L + D+WS G ++ E+
Sbjct: 331 EDNEYTARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 374
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 30 IGCGAYGTVFKARDLQNKGNY---VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G G V R L+ G VA+K L+ E L E SI+ Q F+HPN
Sbjct: 57 IGSGDSGEVCYGR-LRVPGQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQ---FDHPN 111
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
I+R V+ + L+ +T Y+ +D L ++ + + ++ + R + G+
Sbjct: 112 IIRLEGVVTRGRLA--MIVTEYMENGSLDTFLRTHDGQ-----FTIMQLVGMLRGVGAGM 164
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD----MMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ K++DFGL++ + D T + + + APE
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 203 ILLNLGYGTPVDIWSIGCVMAEM 225
+ + + D+WS G VM E+
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEV 247
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISIL 76
L+ +D IG G +G V+K + G VA+K+ R + GI + +
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKG--VLRDGAKVALKR-RTPESSQGIEEFE----TEI 86
Query: 77 KQLDTFEHPNIVRFFDVIHQNILSDER--YLTVYLIFEHVDQDLGSYMEKCPPPGLSASK 134
+ L HP++V DER + +Y E+ + Y P +S +
Sbjct: 87 ETLSFCRHPHLVSLIG------FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 135 VKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT---FDYDMMLTS 191
E+ +G+ +LH+ IIHRD+K N+L+ KI DFG++K D +
Sbjct: 141 RLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 192 VVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQ 240
V TL Y PE + D++S G V+ E + CA + + Q
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE------VLCARSAIVQ 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 193 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 252
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 21/225 (9%)
Query: 5 SADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDG 64
S Q L D+ ++ + ++G G +G V+ N VA+K L+
Sbjct: 167 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS-- 222
Query: 65 IPMSTLREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYME 123
P + L+E ++K+L H +V+ + V+ + I Y++ + + + + G Y
Sbjct: 223 -PEAFLQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY-- 276
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+
Sbjct: 277 ------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 184 ---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+Y + W APE L + D+WS G ++ E+
Sbjct: 331 EDNEYTARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 374
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 60
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K+L H +V+ + V+ + I Y++ + + + ++G Y
Sbjct: 61 LQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKY------- 110
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DY 185
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+ +Y
Sbjct: 111 -LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ W APE L + D+WS G ++ E+
Sbjct: 170 TARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 3 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 57
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K+L H +V+ + V+ + I Y+ + + + + G Y
Sbjct: 58 LQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKY------- 107
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DY 185
L ++ +++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+ +Y
Sbjct: 108 -LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 166
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ W APE L + D+WS G ++ E+
Sbjct: 167 TARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 205
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSVVVTLW 197
Q+ KG++FL S + IHRDL +N+L++ +KI DFGLA+ D + + L
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ APE + + Y D+WS G ++ E++ L
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 60
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K+L H +V+ + V+ + I Y++ + + + ++G Y
Sbjct: 61 LQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKY------- 110
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DY 185
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+ +Y
Sbjct: 111 -LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ W APE L + D+WS G ++ E+
Sbjct: 170 TARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 60
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K+L H +V+ + V+ + I Y++ + + + ++G Y
Sbjct: 61 LQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY------- 110
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DY 185
L ++ ++ Q+ G+ ++ +HRDL N+L+ K+ADFGLA+ +Y
Sbjct: 111 -LRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY 169
Query: 186 DMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ W APE L + D+WS G ++ E+
Sbjct: 170 TARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V+ N VA+K L+ P + L+E ++K+L H +V
Sbjct: 16 KLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKL---RHEKLV 67
Query: 89 RFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ + V+ + I Y++ + + + ++G Y L ++ ++ Q+ G+
Sbjct: 68 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMA 119
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLTSVVVTLWYRAPEIL 204
++ +HRDL+ N+L+ K+ADFGLA+ +Y + W APE
Sbjct: 120 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAA 178
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
L + D+WS G ++ E+
Sbjct: 179 LYGRFTIKSDVWSFGILLTEL 199
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V+ N VA+K L+ P + L+E ++K+L H +V
Sbjct: 14 KLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKL---RHEKLV 65
Query: 89 RFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ + V+ + I Y++ + + + ++G Y L ++ ++ Q+ G+
Sbjct: 66 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY--------LRLPQLVDMAAQIASGMA 117
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLTSVVVTLWYRAPEIL 204
++ +HRDL+ N+L+ K+ADFGLA+ +Y + W APE
Sbjct: 118 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAA 176
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
L + D+WS G ++ E+
Sbjct: 177 LYGRFTIKSDVWSFGILLTEL 197
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 3 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 57
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K+L H +V+ + V+ + I Y+ + + + + G Y
Sbjct: 58 LQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKY------- 107
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD-- 186
L ++ +++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+ + +
Sbjct: 108 -LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEW 166
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ + APE L + D+WS G ++ E+
Sbjct: 167 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 10 QSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
Q L D+ ++ + ++G G +G V+ N VA+K L+ P +
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAF 60
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPP 128
L+E ++K+L H +V+ + V+ + I Y++ + + + ++G Y
Sbjct: 61 LQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKY------- 110
Query: 129 GLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+ + +
Sbjct: 111 -LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX 169
Query: 189 LT--SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ + APE L + D+WS G ++ E+
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V+ R + G AMK K R+K+ + G ++ L E +L + T + P
Sbjct: 196 IGRGGFGEVYGCRK-ADTGKMYAMKCLDKKRIKMKQ-GETLA-LNERIMLSLVSTGDCPF 252
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
IV H D+ + L+ DL ++ + S + ++ +++ G+
Sbjct: 253 IVCMSYAFH---TPDKLSFILDLM---NGGDLHYHLSQHGV--FSEADMRFYAAEIILGL 304
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILL- 205
+ +H+ +++RDLKP N+L+ G ++I+D GLA F S V T Y APE+L
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQK 363
Query: 206 NLGYGTPVDIWSIGCVMAEMWR 227
+ Y + D +S+GC++ ++ R
Sbjct: 364 GVAYDSSADWFSLGCMLFKLLR 385
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 75 ILKQLDTFEHPNIVRFFDVIHQNILS-DERYLTVYLIFEHVDQDLGSYMEKCPPPGLSAS 133
+L++ H NI+ F L+ ++ ++ H+ + K
Sbjct: 73 VLRKT---RHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMK--------- 120
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-------TFDYD 186
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA + ++
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 187 MMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ S+ LW APE++ + Y D+++ G V+ E+
Sbjct: 181 QLSGSI---LWM-APEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 92
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 93 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 143
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKW 202
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 88
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 89 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 139
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 140 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKW 198
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWEL 225
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 111
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 112 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 162
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 163 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKW 221
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWEL 248
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V+ R + G AMK K R+K+ + G ++ L E +L + T + P
Sbjct: 197 IGRGGFGEVYGCRK-ADTGKMYAMKCLDKKRIKMKQ-GETLA-LNERIMLSLVSTGDCPF 253
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
IV H D+ + L+ DL ++ + S + ++ +++ G+
Sbjct: 254 IVCMSYAFH---TPDKLSFILDLM---NGGDLHYHLSQHGV--FSEADMRFYAAEIILGL 305
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILL- 205
+ +H+ +++RDLKP N+L+ G ++I+D GLA F S V T Y APE+L
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQK 364
Query: 206 NLGYGTPVDIWSIGCVMAEMWR 227
+ Y + D +S+GC++ ++ R
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLR 386
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V+ R + G AMK K R+K+ + G ++ L E +L + T + P
Sbjct: 197 IGRGGFGEVYGCRK-ADTGKMYAMKCLDKKRIKMKQ-GETLA-LNERIMLSLVSTGDCPF 253
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
IV H D+ + L+ DL ++ + S + ++ +++ G+
Sbjct: 254 IVCMSYAFH---TPDKLSFILDLM---NGGDLHYHLSQHGV--FSEADMRFYAAEIILGL 305
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILL- 205
+ +H+ +++RDLKP N+L+ G ++I+D GLA F S V T Y APE+L
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQK 364
Query: 206 NLGYGTPVDIWSIGCVMAEMWR 227
+ Y + D +S+GC++ ++ R
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLR 386
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 93
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 94 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 144
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKW 203
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 35/224 (15%)
Query: 17 LDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNED-GIPMSTLREISI 75
+D + +E+ IG G +G V++A + G+ VA+K R +ED + +R+ +
Sbjct: 4 IDFAELTLEEI--IGIGGFGKVYRAFWI---GDEVAVKAARHDPDEDISQTIENVRQEA- 57
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEH---VDQDLGSYMEKCPPPGLSA 132
K +HPNI+ + + E L + + F +++ L ++ PP L
Sbjct: 58 -KLFAMLKHPNIIAL-----RGVCLKEPNLCLVMEFARGGPLNRVLSG--KRIPPDILVN 109
Query: 133 SKVKELTRQMLKGVDFLHSHRI---IHRDLKPQNLLITRA--GG------LKIADFGLAK 181
V Q+ +G+++LH I IHRDLK N+LI + G LKI DFGLA+
Sbjct: 110 WAV-----QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
Query: 182 TFDYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ +++ W APE++ + D+WS G ++ E+
Sbjct: 165 EWHRTTKMSAAGAYAWM-APEVIRASMFSKGSDVWSYGVLLWEL 207
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMK---KLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V+ R + G AMK K R+K+ + G ++ L E +L + T + P
Sbjct: 197 IGRGGFGEVYGCRK-ADTGKMYAMKCLDKKRIKMKQ-GETLA-LNERIMLSLVSTGDCPF 253
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
IV H D+ + L+ DL ++ + S + ++ +++ G+
Sbjct: 254 IVCMSYAFH---TPDKLSFILDLM---NGGDLHYHLSQHGV--FSEADMRFYAAEIILGL 305
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILL- 205
+ +H+ +++RDLKP N+L+ G ++I+D GLA F S V T Y APE+L
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQK 364
Query: 206 NLGYGTPVDIWSIGCVMAEMWR 227
+ Y + D +S+GC++ ++ R
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLR 386
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 433
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 434 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQNR--HVKDKNIIELVHQVSMGMK 484
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 485 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APE 543
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWE 565
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 21/225 (9%)
Query: 5 SADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDG 64
S Q L D+ ++ + ++G G +G V+ N VA+K L+
Sbjct: 167 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS-- 222
Query: 65 IPMSTLREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYME 123
P + L+E ++K+L H +V+ + V+ + I Y++ + + + + G Y
Sbjct: 223 -PEAFLQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKY-- 276
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+
Sbjct: 277 ------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 184 ---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+Y + W APE L + D+WS G ++ E+
Sbjct: 331 EDNEYTARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 374
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 29 QIGCGAYGTVFKAR-DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
++G G +GTV K ++ VA+K L+ + N+ + L E ++++QLD +P I
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYI 432
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
VR I E ++ V + E L Y+++ + + EL Q+ G+
Sbjct: 433 VRMI-----GICEAESWMLVMEMAEL--GPLNKYLQQNR--HVKDKNIIELVHQVSMGMK 483
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFD-----YDMMLTSVVVTLWYRAPE 202
+L +HRDL +N+L+ KI+DFGL+K Y WY APE
Sbjct: 484 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APE 542
Query: 203 ILLNLGYGTPVDIWSIGCVMAE 224
+ + + D+WS G +M E
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWE 564
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 85
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 86 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 136
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 137 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKW 195
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWEL 222
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 93
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 94 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 144
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKW 203
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 21/225 (9%)
Query: 5 SADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDG 64
S Q L D+ ++ + ++G G +G V+ N VA+K L+ +
Sbjct: 168 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPG---NM 222
Query: 65 IPMSTLREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYME 123
P + L+E ++K+L H +V+ + V+ + I Y++ + + + ++G Y
Sbjct: 223 SPEAFLQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-- 277
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGL +
Sbjct: 278 ------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLI 331
Query: 184 ---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+Y + W APE L + D+WS G ++ E+
Sbjct: 332 EDNEYTARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 375
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 90
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 91 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 141
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 142 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKW 200
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWEL 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 91
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 92 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 142
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 143 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKW 201
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKAR--DLQNKGNYVAMKKLRVKLNEDGIPMST-LREISI 75
+G+K L ++G G++G V + K VA+K L+ + M +RE++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYL-----IFEHVDQDLGSYMEKCPPPGL 130
+ LD H N++R + V+ L+ + L + + + + G ++
Sbjct: 75 MHSLD---HRNLIRLYGVV----LTPPMKMVTELAPLGSLLDRLRKHQGHFL-------- 119
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYD 186
+ Q+ +G+ +L S R IHRDL +NLL+ +KI DFGL + D+
Sbjct: 120 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 178
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+M V + APE L + D W G + EM+
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 218
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 30 IGCGAYGTVFKARDLQNKGN--YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V+ L N G + A+K L ++ + G L E I+K F HPN+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKD---FSHPNV 112
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTR---QMLK 144
+ + + S+ L V +H DL +++ VK+L Q+ K
Sbjct: 113 LSLLGIC---LRSEGSPLVVLPYMKH--GDLRNFIRN----ETHNPTVKDLIGFGLQVAK 163
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRAP--- 201
G+ +L S + +HRDL +N ++ +K+ADFGLA+ YD SV + P
Sbjct: 164 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKW 222
Query: 202 ---EILLNLGYGTPVDIWSIGCVMAEM 225
E L + T D+WS G ++ E+
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWEL 249
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 21/225 (9%)
Query: 5 SADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDG 64
S Q L D+ ++ + ++G G +G V+ N VA+K L+
Sbjct: 250 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS-- 305
Query: 65 IPMSTLREISILKQLDTFEHPNIVRFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYME 123
P + L+E ++K+L H +V+ + V+ + I Y++ + + + + G Y
Sbjct: 306 -PEAFLQEAQVMKKL---RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY-- 359
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
L ++ ++ Q+ G+ ++ +HRDL+ N+L+ K+ADFGLA+
Sbjct: 360 ------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 413
Query: 184 ---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+Y + W APE L + D+WS G ++ E+
Sbjct: 414 EDNEYTARQGAKFPIKW-TAPEAALYGRFTIKSDVWSFGILLTEL 457
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 27 LCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
L ++G G +G V G + + +K+ ++G MS I K + H
Sbjct: 14 LKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEK 65
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQD-LGSYMEKCPPPGLSASKVKELTRQMLKG 145
+V+ + V + +++I E++ L +Y+ + ++ E+ + + +
Sbjct: 66 LVQLYGVCTKQ-------RPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEA 117
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLTSVVVTLWYRAPE 202
+++L S + +HRDL +N L+ G +K++DFGL++ +Y S W PE
Sbjct: 118 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRW-SPPE 176
Query: 203 ILLNLGYGTPVDIWSIGCVMAEMWRL 228
+L+ + + DIW+ G +M E++ L
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEIYSL 202
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 23/229 (10%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP---- 127
L + + F ++VR V+ Q T+ ++ DL SY+ P
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPAMAN 128
Query: 128 -PGL---SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
P L S SK+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 184 ---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
DY ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 237
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST---LREISI 75
+G+K L ++G G++G V + G V++ +K + P + +RE++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYL-----IFEHVDQDLGSYMEKCPPPGL 130
+ LD H N++R + V+ L+ + L + + + + G ++
Sbjct: 65 MHSLD---HRNLIRLYGVV----LTPPMKMVTELAPLGSLLDRLRKHQGHFL-------- 109
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYD 186
+ Q+ +G+ +L S R IHRDL +NLL+ +KI DFGL + D+
Sbjct: 110 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 168
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+M V + APE L + D W G + EM+
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 23/229 (10%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 64
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPP---- 127
L + + F ++VR V+ Q T+ ++ DL SY+ P
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPAMAN 118
Query: 128 -PGL---SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF 183
P L S SK+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 119 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 184 ---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
DY ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 227
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 28/205 (13%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST---LREISILKQLDTFEHP 85
++G G +G V+ G Y K+ VK + G MS L E +++K T +H
Sbjct: 20 RLGAGQFGEVWM-------GYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMK---TLQHD 68
Query: 86 NIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLK 144
+VR + V+ R +Y+I E++ + L +++ + K+ + + Q+ +
Sbjct: 69 KLVRLYAVVT-------REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTS---VVVTLWYRAP 201
G+ ++ IHRDL+ N+L++ + KIADFGLA+ + D T+ + + AP
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAP 180
Query: 202 EILLNLG-YGTPVDIWSIGCVMAEM 225
E +N G + D+WS G ++ E+
Sbjct: 181 EA-INFGCFTIKSDVWSFGILLYEI 204
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 17/229 (7%)
Query: 3 EYSADTIQSLNLDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNE 62
E ++ +L L + + +G G +G V+K R G VA+K+L+ + +
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGR--LADGXLVAVKRLKEERTQ 68
Query: 63 DGIPMSTLREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTV-YLIFEHVDQDLGSY 121
G L+ + ++ + H N++R + ER L Y+ V L
Sbjct: 69 GG----ELQFQTEVEMISMAVHRNLLRLRGFC---MTPTERLLVYPYMANGSVASCLRER 121
Query: 122 MEKCPPPGLSASKVKELTRQMLKGVDFLHSH---RIIHRDLKPQNLLITRAGGLKIADFG 178
E PP L K + + +G+ +LH H +IIHRD+K N+L+ + DFG
Sbjct: 122 PESQPP--LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 179 LAKTFDYD--MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
LAK DY + +V + + APE L D++ G ++ E+
Sbjct: 180 LAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 228
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 25/222 (11%)
Query: 17 LDLGDKKY-------DELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST 69
L +G ++Y + L ++G G G V+K R + G+ +A+K++R N++
Sbjct: 13 LTIGGQRYQAEINDLENLGEMGSGTCGQVWKMR-FRKTGHVIAVKQMRRSGNKEENKRIL 71
Query: 70 LREISILKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG 129
+ +LK D P IV+ F I + + ++ + L+ ++ L M+ P
Sbjct: 72 MDLDVVLKSHDC---PYIVQCFGTF---ITNTDVFIAMELMGTCAEK-LKKRMQGPIPER 124
Query: 130 LSASKVKELTRQMLKGVDFL-HSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMM 188
+ + ++T ++K + +L H +IHRD+KP N+L+ G +K+ DFG++ D
Sbjct: 125 I----LGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180
Query: 189 LTSVVVTLWYRAPEIL-----LNLGYGTPVDIWSIGCVMAEM 225
Y APE + Y D+WS+G + E+
Sbjct: 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 115
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N + +KI DFG+ +
Sbjct: 116 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
DY ++ + + +PE L + + T D+WS G V+ E+
Sbjct: 174 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 29/208 (13%)
Query: 28 CQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIP---MSTLREISILKQLDTFEH 84
+IG G++GTV+K + + VA+K L+V D P + E+++L++ H
Sbjct: 42 TRIGSGSFGTVYKGKWHGD----VAVKILKV---VDPTPEQFQAFRNEVAVLRKT---RH 91
Query: 85 PNIVRFFDVIHQ-NILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQML 143
NI+ F + + N+ ++ +++H+ ++ ++ RQ
Sbjct: 92 VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLH---------VQETKFQMFQLIDIARQTA 142
Query: 144 KGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT---FDYDMMLTSVVVTLWYRA 200
+G+D+LH+ IIHRD+K N+ + +KI DFGLA + + ++ + A
Sbjct: 143 QGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 201 PEILL---NLGYGTPVDIWSIGCVMAEM 225
PE++ N + D++S G V+ E+
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYEL 230
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 30 IGCGAYGTVFKARDLQNKGNY---VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V R L+ G VA+K L+ D L E SI+ Q F+HPN
Sbjct: 37 IGVGEFGEVCSGR-LKVPGKREICVAIKTLKAGYT-DKQRRDFLSEASIMGQ---FDHPN 91
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKG 145
I+ V+ + V +I E+++ L +++ K + ++ + R + G
Sbjct: 92 IIHLEGVV-------TKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSG 143
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAP 201
+ +L +HRDL +N+L+ K++DFG+++ + D + + + AP
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + + D+WS G VM E+
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEV 227
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 21/201 (10%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V+ N VA+K L+ P + L+E ++K+L H +V
Sbjct: 18 KLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKL---RHEKLV 69
Query: 89 RFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ + V+ + I Y++ + + + + G Y L ++ ++ Q+ G+
Sbjct: 70 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY--------LRLPQLVDMAAQIASGMA 121
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLTSVVVTLWYRAPEIL 204
++ +HRDL+ N+L+ K+ADFGLA+ +Y + W APE
Sbjct: 122 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAA 180
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
L + D+WS G ++ E+
Sbjct: 181 LYGRFTIKSDVWSFGILLTEL 201
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 60 LNEDGIPMSTLREISILKQ--------LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF 111
LN+D + + T+RE ++ ++ + HP +V+ + V + + L+F
Sbjct: 29 LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-------PICLVF 81
Query: 112 EHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGG 171
E ++ S + +A + + + +G+ +L +IHRDL +N L+
Sbjct: 82 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQV 141
Query: 172 LKIADFGLAKTFDYDMMLTSVVVTLW---YRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+K++DFG+ + F D TS T + + +PE+ Y + D+WS G +M E++
Sbjct: 142 IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKL-------NEDGIPMSTLREISILKQLDTF 82
+G GA+G V +A G A+ K+ VK+ +E MS L+ +S L Q
Sbjct: 54 LGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ---- 108
Query: 83 EHPNIVRFFDVIHQN--ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK---- 136
H NIV +L Y + + + +E P ++ S +
Sbjct: 109 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK-SRVLETDPAFAIANSTLSTRDL 166
Query: 137 -ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSV 192
+ Q+ +G+ FL S IHRD+ +N+L+T KI DFGLA+ D ++ +
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ + + APE + + Y D+WS G ++ E++ L
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 30 IGCGAYGTVFKARDLQNKGNY---VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V R L+ G VA+K L+ D L E SI+ Q F+HPN
Sbjct: 16 IGVGEFGEVCSGR-LKVPGKREICVAIKTLKAGYT-DKQRRDFLSEASIMGQ---FDHPN 70
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKG 145
I+ V+ + V +I E+++ L +++ K + ++ + R + G
Sbjct: 71 IIHLEGVV-------TKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVGMLRGIGSG 122
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAP 201
+ +L +HRDL +N+L+ K++DFG+++ + D + + + AP
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + + D+WS G VM E+
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEV 206
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKAR--DLQNKGNYVAMKKLRVKLNEDGIPMST-LREISI 75
+G+K L ++G G++G V + K VA+K L+ + M +RE++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYL-----IFEHVDQDLGSYMEKCPPPGL 130
+ LD H N++R + V+ L+ + L + + + + G ++
Sbjct: 75 MHSLD---HRNLIRLYGVV----LTPPMKMVTELAPLGSLLDRLRKHQGHFL-------- 119
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYD 186
+ Q+ +G+ +L S R IHRDL +NLL+ +KI DFGL + D+
Sbjct: 120 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 178
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+M V + APE L + D W G + EM+
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 218
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G +G V+ N VA+K L+ P + L+E ++K+L H +V
Sbjct: 15 KLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKL---RHEKLV 66
Query: 89 RFFDVIHQN-ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVD 147
+ + V+ + I Y++ + + + + G Y L ++ ++ Q+ G+
Sbjct: 67 QLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKY--------LRLPQLVDMAAQIASGMA 118
Query: 148 FLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLT--SVVVTLWYRAPEILL 205
++ +HRDL+ N+L+ K+ADFGLA+ + + + + APE L
Sbjct: 119 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 178
Query: 206 NLGYGTPVDIWSIGCVMAEM 225
+ D+WS G ++ E+
Sbjct: 179 YGRFTIKSDVWSFGILLTEL 198
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKAR--DLQNKGNYVAMKKLRVKLNEDGIPMST-LREISI 75
+G+K L ++G G++G V + K VA+K L+ + M +RE++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYL-----IFEHVDQDLGSYMEKCPPPGL 130
+ LD H N++R + V+ L+ + L + + + + G ++
Sbjct: 69 MHSLD---HRNLIRLYGVV----LTPPMKMVTELAPLGSLLDRLRKHQGHFL-------- 113
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYD 186
+ Q+ +G+ +L S R IHRDL +NLL+ +KI DFGL + D+
Sbjct: 114 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+M V + APE L + D W G + EM
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 30 IGCGAYGTVFKARDLQNKGNY---VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V R L+ G VA+K L+ D L E SI+ Q F+HPN
Sbjct: 22 IGVGEFGEVCSGR-LKVPGKREICVAIKTLKAGYT-DKQRRDFLSEASIMGQ---FDHPN 76
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKG 145
I+ V+ + V +I E+++ L +++ K + ++ + R + G
Sbjct: 77 IIHLEGVV-------TKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSG 128
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVV----VTLWYRAP 201
+ +L +HRDL +N+L+ K++DFG+++ + D + + + AP
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 202 EILLNLGYGTPVDIWSIGCVMAEM 225
E + + + D+WS G VM E+
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEV 212
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST---LREISI 75
+G+K L ++G G++G V + G V++ +K + P + +RE++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYL-----IFEHVDQDLGSYMEKCPPPGL 130
+ LD H N++R + V+ L+ + L + + + + G ++
Sbjct: 65 MHSLD---HRNLIRLYGVV----LTPPMKMVTELAPLGSLLDRLRKHQGHFL-------- 109
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYD 186
+ Q+ +G+ +L S R IHRDL +NLL+ +KI DFGL + D+
Sbjct: 110 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+M V + APE L + D W G + EM+
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKAR--DLQNKGNYVAMKKLRVKLNEDGIPMST-LREISI 75
+G+K L ++G G++G V + K VA+K L+ + M +RE++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYL-----IFEHVDQDLGSYMEKCPPPGL 130
+ LD H N++R + V+ L+ + L + + + + G ++
Sbjct: 65 MHSLD---HRNLIRLYGVV----LTPPMKMVTELAPLGSLLDRLRKHQGHFL-------- 109
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYD 186
+ Q+ +G+ +L S R IHRDL +NLL+ +KI DFGL + D+
Sbjct: 110 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+M V + APE L + D W G + EM+
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKL-------NEDGIPMSTLREISILKQLDTF 82
+G GA+G V +A G A+ K+ VK+ +E MS L+ +S L Q
Sbjct: 54 LGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ---- 108
Query: 83 EHPNIVRFFDVIHQN--ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVK---- 136
H NIV +L Y + + + +E P ++ S
Sbjct: 109 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK-SRVLETDPAFAIANSTASTRDL 166
Query: 137 -ELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD---MMLTSV 192
+ Q+ +G+ FL S IHRD+ +N+L+T KI DFGLA+ D ++ +
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ + + APE + + Y D+WS G ++ E++ L
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKAR--DLQNKGNYVAMKKLRVKLNEDGIPMST-LREISI 75
+G+K L ++G G++G V + K VA+K L+ + M +RE++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYL-----IFEHVDQDLGSYMEKCPPPGL 130
+ LD H N++R + V+ L+ + L + + + + G ++
Sbjct: 69 MHSLD---HRNLIRLYGVV----LTPPMKMVTELAPLGSLLDRLRKHQGHFL-------- 113
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF----DYD 186
+ Q+ +G+ +L S R IHRDL +NLL+ +KI DFGL + D+
Sbjct: 114 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 187 MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+M V + APE L + D W G + EM+
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 123 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
D ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ +K ++G G++G V++ KG + RV + S I
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 59
Query: 75 ILKQ---LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSY-------MEK 124
L + + F ++VR V+ Q T+ ++ DL SY ME
Sbjct: 60 FLNEASVMKEFNCHHVVRLLGVVSQG------QPTLVIMELMTRGDLKSYLRSLRPEMEN 113
Query: 125 CP---PPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK 181
P PP LS K+ ++ ++ G+ +L++++ +HRDL +N ++ +KI DFG+ +
Sbjct: 114 NPVLAPPSLS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
Query: 182 TF---DYDMMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLV 229
D ++ + + +PE L + + T D+WS G V+ E+ L
Sbjct: 172 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 222
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 60 LNEDGIPMSTLREISILKQ--------LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF 111
LN+D + + T+RE ++ ++ + HP +V+ + V + + L+F
Sbjct: 27 LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-------PICLVF 79
Query: 112 EHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGG 171
E ++ S + +A + + + +G+ +L +IHRDL +N L+
Sbjct: 80 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV 139
Query: 172 LKIADFGLAKTFDYDMMLTSVVVTLW---YRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+K++DFG+ + F D TS T + + +PE+ Y + D+WS G +M E++
Sbjct: 140 IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGN---YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V L+ G +VA+K L+ E L E SI+ Q F+HPN
Sbjct: 41 IGAGEFGEVCSGH-LKLPGKREIFVAIKTLKSGYTEKQ-RRDFLSEASIMGQ---FDHPN 95
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKG 145
++ V+ ++ V +I E ++ L S++ + + ++ + R + G
Sbjct: 96 VIHLEGVVTKST-------PVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAG 147
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM---MLTSVV---VTLWYR 199
+ +L +HRDL +N+L+ K++DFGL++ + D TS + + + +
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
APE + + + D+WS G VM E+
Sbjct: 208 APEAIQYRKFTSASDVWSYGIVMWEV 233
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 60 LNEDGIPMSTLREISILKQ--------LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF 111
LN+D + + T+RE ++ ++ + HP +V+ + V + + L+F
Sbjct: 29 LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-------PICLVF 81
Query: 112 EHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGG 171
E ++ S + +A + + + +G+ +L +IHRDL +N L+
Sbjct: 82 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV 141
Query: 172 LKIADFGLAKTFDYDMMLTSVVVTLW---YRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+K++DFG+ + F D TS T + + +PE+ Y + D+WS G +M E++
Sbjct: 142 IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKL-------NEDGIPMSTLREISILKQLDTF 82
+G GA+G V +A G A+ K+ VK+ +E MS L+ +S L Q
Sbjct: 39 LGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ---- 93
Query: 83 EHPNIVRFFDVIHQN--ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPG----------- 129
H NIV +L Y + + + + + PG
Sbjct: 94 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 130 --LSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD- 186
L + + Q+ +G+ FL S IHRD+ +N+L+T KI DFGLA+ D
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 187 --MMLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
++ + + + + APE + + Y D+WS G ++ E++ L
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 256
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMS----TLREISILKQLDTFE-H 84
+G G +GTVF L ++ VA+K + P+S E+++L ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQ-VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 85 PNIVRFFDVIHQN---ILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQ 141
P ++R D +L ER L QDL Y+ + P G S+ Q
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPA--------QDLFDYITEKGPLGEGPSRC--FFGQ 147
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLIT-RAGGLKIADFGLAKTFDYDMMLTSVVVTLWYRA 200
++ + HS ++HRD+K +N+LI R G K+ DFG + +D T T Y
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYSP 206
Query: 201 PEILLNLGY-GTPVDIWSIGCVMAEM 225
PE + Y P +WS+G ++ +M
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDM 232
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 60 LNEDGIPMSTLREISILKQ--------LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF 111
LN+D + + T+RE ++ ++ + HP +V+ + V + + L+F
Sbjct: 32 LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-------PICLVF 84
Query: 112 EHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGG 171
E ++ S + +A + + + +G+ +L +IHRDL +N L+
Sbjct: 85 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV 144
Query: 172 LKIADFGLAKTFDYDMMLTSVVVTLW---YRAPEILLNLGYGTPVDIWSIGCVMAEMW 226
+K++DFG+ + F D TS T + + +PE+ Y + D+WS G +M E++
Sbjct: 145 IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 201
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV--TLWY 198
+M+ +D +H +HRD+KP N+L+ G +++ADFG + D + S V T Y
Sbjct: 199 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 258
Query: 199 RAPEILLNL-----GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+PEIL + YG D WS+G M EM F A + VE
Sbjct: 259 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 304
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVV--TLWY 198
+M+ +D +H +HRD+KP N+L+ G +++ADFG + D + S V T Y
Sbjct: 183 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 242
Query: 199 RAPEILLNL-----GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+PEIL + YG D WS+G M EM F A + VE
Sbjct: 243 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G++G V + +D Q G A+KK+R+++ + L P IV
Sbjct: 65 RVGRGSFGEVHRMKDKQT-GFQCAVKKVRLEVFR----------VEELVACAGLSSPRIV 113
Query: 89 RFFDVIHQNILSDERYLTVYL-IFEHVDQDLGSYMEK--CPPPGLSASKVKELTRQMLKG 145
+ + + ++ +++ + E LG +++ C P + Q L+G
Sbjct: 114 PLYGAVREGP-----WVNIFMELLE--GGSLGQLIKQMGCLP----EDRALYYLGQALEG 162
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGG-LKIADFGLAKTFDYDMMLTSVVV------TLWY 198
+++LH+ RI+H D+K N+L++ G + DFG A D + S++ T +
Sbjct: 163 LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 222
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEM 225
APE+++ VDIWS C+M M
Sbjct: 223 MAPEVVMGKPCDAKVDIWSSCCMMLHM 249
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + ++L E P + +
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 105 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 153
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 154 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 208
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 209 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 246
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 14 LDSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREI 73
L L+ +D IG G +G V+K + G VA+K+ R + GI
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKG--VLRDGAKVALKR-RTPESSQGIEEFE---- 83
Query: 74 SILKQLDTFEHPNIVRFFDVIHQNILSDER--YLTVYLIFEHVDQDLGSYMEKCPPPGLS 131
+ ++ L HP++V DER + +Y E+ + Y P +S
Sbjct: 84 TEIETLSFCRHPHLVSLIG------FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMS 137
Query: 132 ASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT---FDYDMM 188
+ E+ +G+ +LH+ IIHRD+K N+L+ KI DFG++K +
Sbjct: 138 WEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL 197
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQ 240
V TL Y PE + D++S G V+ E + CA + + Q
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE------VLCARSAIVQ 243
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G++G V + +D Q G A+KK+R+++ + L P IV
Sbjct: 81 RVGRGSFGEVHRMKDKQT-GFQCAVKKVRLEVFR----------VEELVACAGLSSPRIV 129
Query: 89 RFFDVIHQNILSDERYLTVYL-IFEHVDQDLGSYMEK--CPPPGLSASKVKELTRQMLKG 145
+ + + ++ +++ + E LG +++ C P + Q L+G
Sbjct: 130 PLYGAVREGP-----WVNIFMELLE--GGSLGQLIKQMGCLP----EDRALYYLGQALEG 178
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGG-LKIADFGLAKTFDYDMMLTSVVV------TLWY 198
+++LH+ RI+H D+K N+L++ G + DFG A D + S++ T +
Sbjct: 179 LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 238
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEM 225
APE+++ VDIWS C+M M
Sbjct: 239 MAPEVVMGKPCDAKVDIWSSCCMMLHM 265
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 32/207 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G++G V + D Q G A+KK+R+++ E+ L + P IV
Sbjct: 100 RLGRGSFGEVHRMEDKQT-GFQCAVKKVRLEVFR-------AEELMACAGLTS---PRIV 148
Query: 89 RFFDVIHQNILSDERYLTVYL-IFEHVDQDLGSYMEK--CPPPGLSASKVKELTRQMLKG 145
+ + + ++ +++ + E LG +++ C L + Q L+G
Sbjct: 149 PLYGAVREGP-----WVNIFMELLE--GGSLGQLVKEQGC----LPEDRALYYLGQALEG 197
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGG-LKIADFGLAKTFDYDMMLTSVVV------TLWY 198
+++LHS RI+H D+K N+L++ G + DFG A D + S++ T +
Sbjct: 198 LEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETH 257
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEM 225
APE++L VD+WS C+M M
Sbjct: 258 MAPEVVLGRSCDAKVDVWSSCCMMLHM 284
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 30 IGCGAYGTVFKARDLQNKGNY--VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V++ +KG VA+K + D + E I+K LD HP+I
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-KEKFMSEAVIMKNLD---HPHI 71
Query: 88 VRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTR-----Q 141
V+ +I + ++I E + +LG Y+E+ + + +K LT Q
Sbjct: 72 VKLIGIIEEE--------PTWIIMELYPYGELGHYLER------NKNSLKVLTLVLYSLQ 117
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLTSVV-VTLWYR 199
+ K + +L S +HRD+ +N+L+ +K+ DFGL++ D D SV + + +
Sbjct: 118 ICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 177
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
+PE + + T D+W M E+
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEI 203
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 30 IGCGAYGTVFKARDLQNKGNY--VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V++ +KG VA+K + D + E I+K LD HP+I
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-KEKFMSEAVIMKNLD---HPHI 75
Query: 88 VRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTR-----Q 141
V+ +I + ++I E + +LG Y+E+ + + +K LT Q
Sbjct: 76 VKLIGIIEEE--------PTWIIMELYPYGELGHYLER------NKNSLKVLTLVLYSLQ 121
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLTSVV-VTLWYR 199
+ K + +L S +HRD+ +N+L+ +K+ DFGL++ D D SV + + +
Sbjct: 122 ICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 181
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
+PE + + T D+W M E+
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEI 207
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G GA VF+ R + G+ A+K + + +RE +LK+L+ H NIV+
Sbjct: 17 LGQGATANVFRGRH-KKTGDLFAIKVFNNISFLRPVDVQ-MREFEVLKKLN---HKNIVK 71
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFL 149
F + + + R+ + + F E GL S+ + R ++ G++ L
Sbjct: 72 LFAIEEE---TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 150 HSHRIIHRDLKPQNLL--ITRAGG--LKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILL 205
+ I+HR++KP N++ I G K+ DFG A+ + D S+ T Y P++
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE 188
Query: 206 NL--------GYGTPVDIWSIGCV 221
YG VD+WSIG
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVT 212
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 30 IGCGAYGTVFKARDLQNKGNY--VAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G V++ +KG VA+K + D + E I+K LD HP+I
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-KEKFMSEAVIMKNLD---HPHI 87
Query: 88 VRFFDVIHQNILSDERYLTVYLIFE-HVDQDLGSYMEKCPPPGLSASKVKELTR-----Q 141
V+ +I + ++I E + +LG Y+E+ + + +K LT Q
Sbjct: 88 VKLIGIIEEE--------PTWIIMELYPYGELGHYLER------NKNSLKVLTLVLYSLQ 133
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF-DYDMMLTSVV-VTLWYR 199
+ K + +L S +HRD+ +N+L+ +K+ DFGL++ D D SV + + +
Sbjct: 134 ICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 193
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
+PE + + T D+W M E+
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEI 219
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLA-KTFDYDMMLTSVVV-TLWY 198
+M+ +D +H +HRD+KP N+L+ G +++ADFG K + + +SV V T Y
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 242
Query: 199 RAPEILLNL-----GYGTPVDIWSIGCVMAEMWRLVPLFCASTEVE 239
+PEIL + YG D WS+G M EM F A + VE
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 71 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 119
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 120 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 73 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 121
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 122 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G++G V + +D Q G A+KK+R+++ + L P IV
Sbjct: 79 RLGRGSFGEVHRMKDKQT-GFQCAVKKVRLEVFR----------VEELVACAGLSSPRIV 127
Query: 89 RFFDVIHQNILSDERYLTVYL-IFEHVDQDLGSYMEK--CPPPGLSASKVKELTRQMLKG 145
+ + + ++ +++ + E LG +++ C P + Q L+G
Sbjct: 128 PLYGAVREGP-----WVNIFMELLE--GGSLGQLIKQMGCLP----EDRALYYLGQALEG 176
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGG-LKIADFGLAKTFDYDMMLTSVVV------TLWY 198
+++LH+ RI+H D+K N+L++ G + DFG A D + S++ T +
Sbjct: 177 LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 236
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEM 225
APE+++ VDIWS C+M M
Sbjct: 237 MAPEVVMGKPCDAKVDIWSSCCMMLHM 263
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 77 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 125
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 126 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 181 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 218
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 74 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 122
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 123 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 73
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 74 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 125 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEI 205
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 74 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 122
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 123 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
+IG G +G V + G ++ K+ +K ++G MS I + + HP +V
Sbjct: 34 EIGSGQFGLV-------HLGYWLNKDKVAIKTIKEG-SMSEDDFIEEAEVMMKLSHPKLV 85
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDF 148
+ + V + + L+FE ++ S + +A + + + +G+ +
Sbjct: 86 QLYGVCLEQA-------PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 138
Query: 149 LHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSVVVTLW---YRAPEILL 205
L +IHRDL +N L+ +K++DFG+ + F D TS T + + +PE+
Sbjct: 139 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFS 197
Query: 206 NLGYGTPVDIWSIGCVMAEMW 226
Y + D+WS G +M E++
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVF 218
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 128/312 (41%), Gaps = 72/312 (23%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
QIG G YG V+ + +G VA+K E+ S RE I + + H NI+
Sbjct: 44 QIGKGRYGEVWMGK---WRGEKVAVKVFFT--TEEA---SWFRETEIYQTV-LMRHENIL 94
Query: 89 RFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDF 148
F I +I + +YLI ++ + GS + L A + +L + G+
Sbjct: 95 GF---IAADIKGTGSWTQLYLITDY--HENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCH 149
Query: 149 LHSH--------RIIHRDLKPQNLLITRAGGLKIADFGLAKTF-----DYDMMLTSVVVT 195
LH+ I HRDLK +N+L+ + G IAD GLA F + D+ + V T
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGT 209
Query: 196 LWYRAPEIL---LNLGYGTP---VDIWSIGCVMAEMWR-----------------LVPLF 232
Y PE+L LN + D++S G ++ E+ R LVP
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269
Query: 233 CASTEVEQLKCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLES 292
+ ++ ++ CI ++ PS +P WSS E C + L+
Sbjct: 270 PSYEDMREIVCIKKL--RPS---FPNR----WSSDE-------------CLRQMGKLMTE 307
Query: 293 MLTFNPADRISA 304
NPA R++A
Sbjct: 308 CWAHNPASRLTA 319
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 74 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 122
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 123 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 81 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 129
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 130 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 185 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 222
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 95
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 96 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 144
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 145 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 199
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 200 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 237
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 73
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 74 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI 184
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEI 205
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 73
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 74 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEI 205
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 65 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 113
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 114 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 206
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 56
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 57 VLRKT---RHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 104
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT- 182
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 105 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154
Query: 183 --FDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ + ++ + APE++ Y D+++ G V+ E+
Sbjct: 155 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 71 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGXLLDYVREHKDNIGSQYL-------- 119
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 120 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 62 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 109
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT- 182
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 110 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 159
Query: 183 --FDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ + ++ + APE++ Y D+++ G V+ E+
Sbjct: 160 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 78 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 126
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 127 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 56
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 57 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 104
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT- 182
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 105 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154
Query: 183 --FDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ + ++ + APE++ Y D+++ G V+ E+
Sbjct: 155 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 71 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 119
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 120 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 30 IGCGAYGTVFKARDLQNKGNYV--AMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
+G G +G+V +A+ Q G++V A+K L+ + LRE + +K+ F+HP++
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE---FDHPHV 87
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKE---------L 138
+ V ++ + + ++ DL ++ L AS++ E L
Sbjct: 88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAF--------LLASRIGENPFNLPLQTL 139
Query: 139 TRQMLK---GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLTSV 192
R M+ G+++L S IHRDL +N ++ + +ADFGL++ DY +
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 193 VVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ + + A E L + Y D+W+ G M E+
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 62 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 109
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT- 182
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 110 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 159
Query: 183 --FDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ + ++ + APE++ Y D+++ G V+ E+
Sbjct: 160 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 58
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 59 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 106
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKT- 182
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 107 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 156
Query: 183 --FDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ + ++ + APE++ Y D+++ G V+ E+
Sbjct: 157 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 204
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 51/232 (21%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 56
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 57 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 104
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-- 181
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 105 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK 154
Query: 182 -----TFDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ ++ + S+ LW APE++ Y D+++ G V+ E+
Sbjct: 155 SRWSGSHQFEQLSGSI---LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 453
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 454 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 504
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 505 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 565 NFRRFTSASDVWMFGVCMWEI 585
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 70
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 71 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 121
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 122 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 181
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 182 NFRRFTSASDVWMFGVCMWEI 202
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 51/232 (21%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 21 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 77 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 124
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-- 181
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 125 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK 174
Query: 182 -----TFDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ ++ + S+ LW APE++ Y D+++ G V+ E+
Sbjct: 175 SRWSGSHQFEQLSGSI---LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYEL 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 75
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 76 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 126
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 127 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 186
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 187 NFRRFTSASDVWMFGVCMWEI 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 73
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 74 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 124
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEI 205
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 101
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 102 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 152
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 153 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 212
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 213 NFRRFTSASDVWMFGVCMWEI 233
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 112/242 (46%), Gaps = 31/242 (12%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMST---LREISILKQLDTFEHP 85
++G G +G V+ G Y K+ VK + G MS L E +++K T +H
Sbjct: 19 KLGAGQFGEVWM-------GYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMK---TLQHD 67
Query: 86 NIVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLK 144
+VR + V+ + +Y+I E + + L +++ + K+ + + Q+ +
Sbjct: 68 KLVRLYAVVTKE-------EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 145 GVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLTSVVVTLWYRAP 201
G+ ++ IHRDL+ N+L++ + KIADFGLA+ +Y + W AP
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW-TAP 179
Query: 202 EILLNLG-YGTPVDIWSIGCVMAEM--WRLVPLFCASTEVEQLKCIFRVIGTPSMNEWPE 258
E +N G + ++WS G ++ E+ + +P + T + + + + P M P+
Sbjct: 180 EA-INFGCFTIKSNVWSFGILLYEIVTYGKIP-YPGRTNADVMSALSQGYRMPRMENCPD 237
Query: 259 NI 260
+
Sbjct: 238 EL 239
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 51/232 (21%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 84 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 131
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-- 181
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 132 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 181
Query: 182 -----TFDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ ++ + S+ LW APE++ Y D+++ G V+ E+
Sbjct: 182 SRWSGSHQFEQLSGSI---LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYEL 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 78
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 79 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 129
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 130 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 189
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 190 NFRRFTSASDVWMFGVCMWEI 210
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 76
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 77 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 127
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 128 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 187
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 188 NFRRFTSASDVWMFGVCMWEI 208
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVY-----LIFEHVDQDLGSYMEKCPPPGLSAS 133
+ + ++P++ R + + + L + + EH D Y+
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL----------- 123
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLT 190
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 124 --LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVY-----LIFEHVDQDLGSYMEKCPPPGLSAS 133
+ + ++P++ R + + + L + + EH D Y+
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL----------- 120
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLT 190
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 121 --LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 30 IGCGAYGTVFKARDL--QNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNI 87
IG G +G V + + +N VA+K + D + L+E ++Q F+HP+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQ---FDHPHI 453
Query: 88 VRFFDVIHQNILSDERYLTVYLIFEHVD-QDLGSYMEKCPPPGLSASKVKELTRQMLKGV 146
V+ VI +N V++I E +L S+++ L + + Q+ +
Sbjct: 454 VKLIGVITEN--------PVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 504
Query: 147 DFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV--VVTLWYRAPEIL 204
+L S R +HRD+ +N+L++ +K+ DFGL++ + + + + + APE +
Sbjct: 505 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
Query: 205 LNLGYGTPVDIWSIGCVMAEM 225
+ + D+W G M E+
Sbjct: 565 NFRRFTSASDVWMFGVCMWEI 585
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVY-----LIFEHVDQDLGSYMEKCPPPGLSAS 133
+ + ++P++ R + + + L + + EH D Y+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL----------- 122
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLT 190
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 123 --LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVY-----LIFEHVDQDLGSYMEKCPPPGLSAS 133
+ + ++P++ R + + + L + + EH D Y+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL----------- 121
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLT 190
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 122 --LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVY-----LIFEHVDQDLGSYMEKCPPPGLSAS 133
+ + ++P++ R + + + L + + EH D Y+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL----------- 119
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLT 190
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 120 --LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 51/232 (21%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 85 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 132
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-- 181
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 133 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 182
Query: 182 -----TFDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ ++ + S+ LW APE++ Y D+++ G V+ E+
Sbjct: 183 SRWSGSHQFEQLSGSI---LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 51/232 (21%)
Query: 15 DSLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREIS 74
D ++ D + +IG G++GTV+K + + VA+K L V + E+
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 75 ILKQLDTFEHPNIVRFFD--------VIHQNILSDERYLTVYLI---FEHVDQDLGSYME 123
+L++ H NI+ F ++ Q Y +++I FE +
Sbjct: 85 VLRKT---RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--------- 132
Query: 124 KCPPPGLSASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK-- 181
K+ ++ RQ +G+D+LH+ IIHRDLK N+ + +KI DFGLA
Sbjct: 133 ----------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK 182
Query: 182 -----TFDYDMMLTSVVVTLWYRAPEILL---NLGYGTPVDIWSIGCVMAEM 225
+ ++ + S+ LW APE++ Y D+++ G V+ E+
Sbjct: 183 SRWSGSHQFEQLSGSI---LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G GA+GTV+K + +G V + LNE P + + + + + +HP++VR
Sbjct: 23 LGSGAFGTVYKGIWVP-EGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 90 FFDVIHQNILSDERYLTVYL---------IFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
V LS L L + EH D ++GS + +
Sbjct: 82 LLGVC----LSPTIQLVTQLMPHGCLLEYVHEHKD-NIGSQL------------LLNWCV 124
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDMMLTSV---VVTLW 197
Q+ KG+ +L R++HRDL +N+L+ +KI DFGLA+ + D + + +
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 198 YRAPEILLNLGYGTPVDIWSIGCVMAEM 225
+ A E + + D+WS G + E+
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWEL 212
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVY-----LIFEHVDQDLGSYMEKCPPPGLSAS 133
+ + ++P++ R + + + L + + EH D Y+
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYL----------- 120
Query: 134 KVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDMMLT 190
Q+ KG+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 121 --LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 191 SVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 213
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 24/193 (12%)
Query: 138 LTRQMLKGVDFLHSHRIIHRDLKPQNLLI---TRAGGLKIADFGLAKTFDYDMMLTSVVV 194
+ + + +DFLH+ I HRDLKP+N+L + +KI DFGL + + +
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 195 --------TLWYRAPEILLNLG-----YGTPVDIWSIGCVMAEMWRLVPLFCASTEVEQL 241
+ Y APE++ Y D+WS+G ++ + P F +
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD-- 233
Query: 242 KCIFRVIGTPSMNEWPENISLMWSSFEQYSKVAFSAIFMDCCSKANSLLESMLTFNPADR 301
G P ++++ S ++ + A L+ +L + R
Sbjct: 234 ------CGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287
Query: 302 ISAADALEHPYFK 314
+SAA L+HP+ +
Sbjct: 288 LSAAQVLQHPWVQ 300
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 35/249 (14%)
Query: 29 QIGCGAYGTVFKAR--DLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
++G GA+G VF A +L + + + +K RE +L L +H +
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL---QHEH 78
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPG--------------LS 131
IV+F+ V + ++FE++ DL ++ P L
Sbjct: 79 IVKFYGVCGDGD-------PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 132 ASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAK---TFDYDMM 188
S++ + Q+ G+ +L S +HRDL +N L+ +KI DFG+++ + DY +
Sbjct: 132 LSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 189 LTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL--VPLFCASTEVEQLKCIF- 245
++ + + PE ++ + T D+WS G ++ E++ P F S E ++CI
Sbjct: 192 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-TEVIECITQ 250
Query: 246 -RVIGTPSM 253
RV+ P +
Sbjct: 251 GRVLERPRV 259
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G GA VF+ R + G+ A+K + + +RE +LK+L+ H NIV+
Sbjct: 17 LGQGATANVFRGRH-KKTGDLFAIKVFNNISFLRPVDVQ-MREFEVLKKLN---HKNIVK 71
Query: 90 FFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKELTRQMLKGVDFL 149
F + + + R+ + + F E GL S+ + R ++ G++ L
Sbjct: 72 LFAIEEE---TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 150 HSHRIIHRDLKPQNLL--ITRAGG--LKIADFGLAKTFDYDMMLTSVVVTLWYRAPEILL 205
+ I+HR++KP N++ I G K+ DFG A+ + D + T Y P++
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYE 188
Query: 206 NL--------GYGTPVDIWSIGCVM 222
YG VD+WSIG
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 30 IGCGAYGTVFKARDLQNKGN---YVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPN 86
IG G +G V L+ G +VA+K L+ E L E SI+ Q F+HPN
Sbjct: 15 IGAGEFGEVCSGH-LKLPGKREIFVAIKTLKSGYTEKQ-RRDFLSEASIMGQ---FDHPN 69
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQ-DLGSYMEKCPPPGLSASKVKELTRQMLKG 145
++ V+ ++ V +I E ++ L S++ + + ++ + R + G
Sbjct: 70 VIHLEGVVTKST-------PVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAG 121
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYDM---MLTSVV---VTLWYR 199
+ +L +HR L +N+L+ K++DFGL++ + D TS + + + +
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 200 APEILLNLGYGTPVDIWSIGCVMAEM 225
APE + + + D+WS G VM E+
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEV 207
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIVR 89
+G GA+GTV+K + +G V + LNE P + + + + + +HP++VR
Sbjct: 46 LGSGAFGTVYKGIWVP-EGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 90 FFDVIHQNILSDERYLTVYL---------IFEHVDQDLGSYMEKCPPPGLSASKVKELTR 140
V LS L L + EH D ++GS + +
Sbjct: 105 LLGVC----LSPTIQLVTQLMPHGCLLEYVHEHKD-NIGSQL------------LLNWCV 147
Query: 141 QMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTFDYD 186
Q+ KG+ +L R++HRDL +N+L+ +KI DFGLA+ + D
Sbjct: 148 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 29 QIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQLDTFEHPNIV 88
++G G++G V + D Q G A+KK+R+++ E+ L + P IV
Sbjct: 81 RLGRGSFGEVHRMEDKQT-GFQCAVKKVRLEVFR-------AEELMACAGLTS---PRIV 129
Query: 89 RFFDVIHQNILSDERYLTVYL-IFEHVDQDLGSYMEK--CPPPGLSASKVKELTRQMLKG 145
+ + + ++ +++ + E LG +++ C L + Q L+G
Sbjct: 130 PLYGAVREGP-----WVNIFMELLE--GGSLGQLVKEQGC----LPEDRALYYLGQALEG 178
Query: 146 VDFLHSHRIIHRDLKPQNLLITRAGG-LKIADFGLAKTFDYDMMLTSVVV------TLWY 198
+++LHS RI+H D+K N+L++ G + DFG A D + ++ T +
Sbjct: 179 LEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETH 238
Query: 199 RAPEILLNLGYGTPVDIWSIGCVMAEM 225
APE++L VD+WS C+M M
Sbjct: 239 MAPEVVLGRSCDAKVDVWSSCCMMLHM 265
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 41/243 (16%)
Query: 16 SLDLGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISI 75
SLDL + K EL IG G YG V+K L + VA+K ++ I + + +
Sbjct: 9 SLDLDNLKLLEL--IGRGRYGAVYKG-SLDERP--VAVKVFSFANRQNFINEKNIYRVPL 63
Query: 76 LKQLDTFEHPNIVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKV 135
+ EH NI RF V + + +D R + ++ + + L Y+ +S+ +
Sbjct: 64 M------EHDNIARFI-VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR- 115
Query: 136 KELTRQMLKGVDFLHSH---------RIIHRDLKPQNLLITRAGGLKIADFGLA------ 180
L + +G+ +LH+ I HRDL +N+L+ G I+DFGL+
Sbjct: 116 --LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
Query: 181 ---KTFDYDMMLTSVVVTLWYRAPEIL---LNL----GYGTPVDIWSIGCVMAEMW-RLV 229
+ + D S V T+ Y APE+L +NL VD++++G + E++ R
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
Query: 230 PLF 232
LF
Sbjct: 234 DLF 236
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 67
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 68 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 116
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ +G+++L R++HRDL +N+L+ +KI DFGLAK + +
Sbjct: 117 -----LNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 172 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 73 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 121
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFG AK + +
Sbjct: 122 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 28/218 (12%)
Query: 19 LGDKKYDELCQIGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ 78
L + ++ ++ +G GA+GTV+K + +G V + +L E P + +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 79 LDTFEHPNIVRFFDVIHQNILSDERYLTVYLIF--------EHVDQDLGSYMEKCPPPGL 130
+ + ++P++ R + + S + +T + F EH D Y+
Sbjct: 71 MASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL-------- 119
Query: 131 SASKVKELTRQMLKGVDFLHSHRIIHRDLKPQNLLITRAGGLKIADFGLAKTF---DYDM 187
Q+ KG+++L R++HRDL +N+L+ +KI DFG AK + +
Sbjct: 120 -----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 174
Query: 188 MLTSVVVTLWYRAPEILLNLGYGTPVDIWSIGCVMAEM 225
V + + A E +L+ Y D+WS G + E+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ---LDTFEHPN 86
+G GA+G V++ Q G L+V + S E+ L + + F H N
Sbjct: 55 LGHGAFGEVYEG---QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 111
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL-----TRQ 141
IVR V Q++ R++ + L+ DL S++ + P S + L R
Sbjct: 112 IVRCIGVSLQSL---PRFILLELM---AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 165
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTF---DYDMMLTSVVVT 195
+ G +L + IHRD+ +N L+T G KI DFG+A+ Y ++
Sbjct: 166 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 225
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ + PE + + + D WS G ++ E++ L
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 258
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 30 IGCGAYGTVFKARDLQNKGNYVAMKKLRVKLNEDGIPMSTLREISILKQ---LDTFEHPN 86
+G GA+G V++ Q G L+V + S E+ L + + F H N
Sbjct: 45 LGHGAFGEVYEG---QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 101
Query: 87 IVRFFDVIHQNILSDERYLTVYLIFEHVDQDLGSYMEKCPPPGLSASKVKEL-----TRQ 141
IVR V Q++ R++ + L+ DL S++ + P S + L R
Sbjct: 102 IVRCIGVSLQSL---PRFILLELM---AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 155
Query: 142 MLKGVDFLHSHRIIHRDLKPQNLLITRAGG---LKIADFGLAKTF---DYDMMLTSVVVT 195
+ G +L + IHRD+ +N L+T G KI DFG+A+ Y ++
Sbjct: 156 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 215
Query: 196 LWYRAPEILLNLGYGTPVDIWSIGCVMAEMWRL 228
+ + PE + + + D WS G ++ E++ L
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 248
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,696,945
Number of Sequences: 62578
Number of extensions: 400393
Number of successful extensions: 3854
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 685
Number of HSP's gapped (non-prelim): 1232
length of query: 321
length of database: 14,973,337
effective HSP length: 99
effective length of query: 222
effective length of database: 8,778,115
effective search space: 1948741530
effective search space used: 1948741530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)