Query psy2677
Match_columns 157
No_of_seqs 239 out of 1234
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 22:22:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tc5_A Peptidyl-prolyl CIS-tra 100.0 9.6E-45 3.3E-49 265.7 14.7 157 1-157 4-166 (166)
2 1yw5_A Peptidyl prolyl CIS/tra 100.0 8.4E-38 2.9E-42 231.2 15.5 155 3-157 5-177 (177)
3 3i6c_A Peptidyl-prolyl CIS-tra 100.0 9.4E-35 3.2E-39 203.0 13.0 115 43-157 9-123 (123)
4 2lj4_A Peptidyl-prolyl CIS-tra 100.0 1.6E-34 5.5E-39 199.8 12.6 113 45-157 1-115 (115)
5 4g2p_A Chaperone SURA; structu 100.0 1.6E-31 5.4E-36 183.5 11.9 102 44-157 4-106 (110)
6 3gpk_A PPIC-type peptidyl-prol 100.0 1.3E-31 4.5E-36 184.3 10.6 99 45-157 4-102 (112)
7 2pv1_A Chaperone SURA; surviVa 100.0 9.5E-31 3.3E-35 177.4 10.9 101 47-157 1-101 (103)
8 2jzv_A Foldase protein PRSA; p 100.0 1.1E-29 3.8E-34 174.4 13.6 107 45-157 4-111 (111)
9 1j6y_A Peptidyl-prolyl CIS-tra 100.0 1.6E-30 5.5E-35 185.2 8.0 116 42-157 20-139 (139)
10 1jns_A Peptidyl-prolyl CIS-tra 100.0 3.7E-29 1.3E-33 166.4 9.9 89 47-157 2-90 (92)
11 2rqs_A Parvulin-like peptidyl- 100.0 8.7E-29 3E-33 166.1 11.4 93 43-157 4-97 (97)
12 1zk6_A Foldase protein PRSA; a 100.0 5.9E-29 2E-33 165.6 9.9 90 46-157 2-92 (93)
13 3ui4_A Peptidyl-prolyl CIS-tra 100.0 3.5E-28 1.2E-32 164.3 10.5 90 45-157 4-99 (101)
14 2kgj_A Peptidyl-prolyl CIS-tra 99.9 8.8E-28 3E-32 162.7 7.6 90 47-157 2-92 (102)
15 3nrk_A LIC12922; NC domain, pa 99.9 5.3E-23 1.8E-27 164.5 8.0 100 46-157 157-263 (325)
16 3rfw_A Cell-binding factor 2; 99.9 1.8E-22 6.3E-27 155.8 9.1 94 43-157 107-207 (252)
17 1m5y_A SurviVal protein, survi 99.9 2.8E-22 9.6E-27 163.8 10.2 105 43-157 148-252 (408)
18 1m5y_A SurviVal protein, survi 99.8 1.2E-20 4.2E-25 154.1 11.6 100 45-157 261-362 (408)
19 3rgc_A Possible periplasmic pr 99.6 5.5E-16 1.9E-20 119.4 4.0 76 43-157 130-205 (252)
20 2jv4_A Peptidyl-prolyl CIS/tra 98.8 1.5E-09 5E-14 64.5 2.9 39 1-39 3-41 (54)
21 2dmv_A Itchy homolog E3 ubiqui 98.6 1.2E-08 4.2E-13 57.7 2.5 39 1-40 3-41 (43)
22 2ysf_A E3 ubiquitin-protein li 98.6 1.7E-08 5.9E-13 56.2 2.2 37 1-38 3-39 (40)
23 1wr4_A Ubiquitin-protein ligas 98.6 2.2E-08 7.6E-13 54.4 2.1 35 2-37 1-35 (36)
24 2zaj_A Membrane-associated gua 98.6 2.4E-08 8.3E-13 58.0 2.2 37 3-40 11-47 (49)
25 2ez5_W Dnedd4, E3 ubiquitin-pr 98.5 3.7E-08 1.2E-12 56.5 2.6 37 2-39 7-43 (46)
26 2ysg_A Syntaxin-binding protei 98.5 3.8E-08 1.3E-12 54.8 2.5 35 2-37 4-38 (40)
27 2djy_A SMAD ubiquitination reg 98.5 4E-08 1.4E-12 55.3 2.5 37 2-39 4-40 (42)
28 1wr3_A Ubiquitin-protein ligas 98.5 3.7E-08 1.3E-12 53.5 2.0 35 2-37 1-35 (36)
29 2ysb_A Salvador homolog 1 prot 98.5 5.3E-08 1.8E-12 56.6 2.4 37 3-40 9-45 (49)
30 2dwv_A Salvador homolog 1 prot 98.5 5.3E-08 1.8E-12 56.6 2.0 36 3-39 11-46 (49)
31 2law_A Yorkie homolog; YAP, SM 98.5 4.3E-08 1.5E-12 54.0 1.6 35 2-37 3-37 (38)
32 1wr7_A NEDD4-2; all-beta, liga 98.5 4.6E-08 1.6E-12 54.7 1.5 35 2-37 5-39 (41)
33 2ysc_A Amyloid beta A4 precurs 98.4 7.6E-08 2.6E-12 53.2 1.8 34 2-37 5-38 (39)
34 2yse_A Membrane-associated gua 98.4 5.4E-08 1.8E-12 58.8 1.1 35 3-38 11-45 (60)
35 2kyk_A E3 ubiquitin-protein li 98.4 1.2E-07 4E-12 52.5 1.9 34 4-38 5-38 (39)
36 2ysh_A GAS-7, growth-arrest-sp 98.4 1.4E-07 4.9E-12 52.3 2.3 36 2-38 4-39 (40)
37 1i5h_W Rnedd4, ubiquitin ligas 98.4 1.6E-07 5.5E-12 54.7 2.4 36 4-40 10-45 (50)
38 2l4j_A YES-associated protein 98.4 1.7E-07 6E-12 53.6 2.3 36 3-39 9-44 (46)
39 2kpz_A E3 ubiquitin-protein li 98.4 1.3E-07 4.5E-12 54.9 1.8 36 3-39 10-45 (49)
40 2jmf_A E3 ubiquitin-protein li 98.3 2.2E-07 7.5E-12 54.8 2.6 36 3-39 16-51 (53)
41 2ho2_A Fe65 protein, amyloid b 98.3 1.7E-07 5.7E-12 51.5 1.8 34 4-39 2-35 (38)
42 1wmv_A WWOX, WW domain contain 98.3 4.4E-07 1.5E-11 53.7 3.4 38 3-41 9-46 (54)
43 2ysd_A Membrane-associated gua 98.3 2.9E-07 9.8E-12 55.1 2.0 36 3-39 12-47 (57)
44 1e0m_A Wwprototype; SH3 protot 98.2 3.4E-07 1.2E-11 49.9 1.8 34 4-38 2-35 (37)
45 2jx8_A Hpcif1, phosphorylated 98.2 1.2E-07 4E-12 55.8 -1.3 37 3-39 8-44 (52)
46 1ymz_A CC45; artificial protei 98.1 7.9E-07 2.7E-11 50.1 1.8 34 4-38 7-40 (43)
47 1jmq_A YAP65, 65 kDa YES-assoc 98.1 1.5E-06 5E-11 49.7 2.7 37 2-39 5-41 (46)
48 2e45_A Fe65 protein, amyloid b 98.0 2.1E-06 7.1E-11 50.4 1.9 35 3-39 17-51 (55)
49 3l4h_A E3 ubiquitin-protein li 97.9 3.8E-06 1.3E-10 56.4 2.2 37 3-40 70-106 (109)
50 2kxq_A E3 ubiquitin-protein li 97.8 5.8E-06 2E-10 53.9 1.7 37 2-39 6-42 (90)
51 1tk7_A CG4244-PB; WW domain, n 97.7 9.2E-06 3.1E-10 52.7 1.7 36 3-39 10-45 (88)
52 2kxq_A E3 ubiquitin-protein li 97.6 2.3E-05 7.8E-10 51.0 2.3 35 4-39 54-88 (90)
53 1tk7_A CG4244-PB; WW domain, n 97.4 3.8E-05 1.3E-09 49.7 1.5 33 4-37 55-87 (88)
54 1eg3_A Dystrophin; EF-hand lik 97.3 4.7E-05 1.6E-09 58.8 0.8 33 4-37 10-42 (261)
55 3olm_A E3 ubiquitin-protein li 97.3 0.0001 3.6E-09 60.7 2.4 36 4-40 7-42 (429)
56 2ysi_A Transcription elongatio 97.2 0.00017 5.8E-09 39.8 2.3 35 3-38 5-39 (40)
57 1e0n_A Hypothetical protein; Y 97.1 0.00017 5.7E-09 36.3 1.1 27 8-36 1-27 (27)
58 1ywi_A Formin-binding protein 97.0 0.00014 4.8E-09 40.3 0.7 34 3-37 7-40 (41)
59 2l5f_A PRE-mRNA-processing fac 96.8 0.00035 1.2E-08 45.5 1.4 35 3-38 9-43 (92)
60 1o6w_A PRP40, PRE-mRNA process 96.6 0.00036 1.2E-08 43.6 0.3 33 6-39 41-73 (75)
61 1e0l_A Formin binding protein; 96.3 0.0017 5.8E-08 35.0 1.6 32 6-38 4-35 (37)
62 2jxw_A WW domain-binding prote 95.4 0.0056 1.9E-07 38.1 1.5 32 5-37 43-74 (75)
63 2l5f_A PRE-mRNA-processing fac 95.2 0.0042 1.5E-07 40.2 0.5 32 6-38 53-84 (92)
64 1o6w_A PRP40, PRE-mRNA process 94.8 0.0082 2.8E-07 37.2 1.0 30 8-38 2-31 (75)
65 2jxw_A WW domain-binding prote 93.1 0.027 9.4E-07 34.9 1.0 31 7-38 4-34 (75)
66 2dk1_A WW domain-binding prote 92.7 0.046 1.6E-06 31.3 1.4 29 9-38 8-36 (50)
67 2dk7_A Transcription elongatio 84.4 0.37 1.3E-05 29.7 1.3 29 9-38 21-49 (73)
68 3le4_A Microprocessor complex 78.0 1.1 3.7E-05 27.5 1.7 35 3-38 26-60 (79)
69 1vp7_A Exodeoxyribonuclease VI 43.7 29 0.001 22.4 3.7 33 75-107 31-63 (100)
70 2ux0_A Calcium-calmodulin depe 38.8 21 0.00073 23.3 2.7 33 74-108 10-42 (143)
71 1d9n_A Methyl-CPG-binding prot 34.5 18 0.00063 22.0 1.6 11 4-14 9-19 (75)
72 3f7s_A Uncharacterized NTF2-li 34.1 30 0.001 22.5 2.8 33 75-109 6-38 (142)
73 1u14_A Hypothetical UPF0244 pr 33.9 18 0.00063 25.7 1.7 41 85-126 110-151 (172)
74 1zwy_A Hypothetical UPF0244 pr 27.9 20 0.0007 25.7 1.1 41 85-126 120-161 (185)
75 2f86_B Hypothetical protein K1 25.2 57 0.002 21.9 3.0 33 75-109 10-42 (143)
76 3c2i_A Methyl-CPG-binding prot 24.6 24 0.00084 22.6 0.9 13 3-15 21-33 (97)
77 3d9r_A Ketosteroid isomerase-l 23.7 63 0.0022 20.3 2.9 33 75-109 9-41 (135)
78 4hyz_A Uncharacterized protein 23.4 1.5E+02 0.005 19.0 4.7 29 76-106 13-41 (114)
79 3h3h_A Uncharacterized snoal-l 23.3 55 0.0019 20.6 2.6 31 76-108 7-37 (122)
80 2rcd_A Uncharacterized protein 23.0 1.4E+02 0.0046 18.9 4.5 32 75-108 12-43 (129)
81 2ppn_A FK506-binding protein 1 21.0 64 0.0022 20.0 2.5 22 121-142 52-73 (107)
82 3bmb_A Regulator of nucleoside 21.0 78 0.0027 21.1 3.0 30 125-155 91-124 (136)
83 1yat_A FK506 binding protein; 20.6 67 0.0023 20.3 2.5 22 121-142 58-79 (113)
84 3cnx_A Uncharacterized protein 20.4 1.2E+02 0.0041 21.0 4.0 32 75-108 10-41 (170)
85 3twe_A Alpha4H; unknown functi 20.0 84 0.0029 14.7 2.8 17 77-93 11-27 (27)
No 1
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=100.00 E-value=9.6e-45 Score=265.68 Aligned_cols=157 Identities=62% Similarity=1.086 Sum_probs=136.0
Q ss_pred CCC-CCCCcchhhhcccCCCceeeEeeecccccccCCCCCCC-----CCCCCCcEEEEEEEeeccCCCCCCCCCccchhh
Q psy2677 1 MGD-EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKPAE-----ASGGPEQVQCSHLLVKHKESRKPYSWRDDNITR 74 (157)
Q Consensus 1 ~~~-~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~ 74 (157)
|+| ++||+||+.+.+.+.++.||+|+.|+.++|+.|..++. ....+++|+++||||+..+.+.|.+++.+++.+
T Consensus 4 m~~~~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~~~~~~~~~~~~~~~v~~~HILi~~~~~~~p~~~~~~~~~~ 83 (166)
T 3tc5_A 4 MADEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITR 83 (166)
T ss_dssp ------CCTTEEEEECTTTCCEEEEETTTCCEESSCC-------------CCSCEEEEEEEECCTTSSSCCBTTBSSCCC
T ss_pred CCCCCCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCCcccccccccccccceeEeeeEEecccccCccccchhhhhh
Confidence 677 67999999999988999999999999999999987654 256789999999999988877777777777778
Q ss_pred hHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCCCCcHHHHHHHhcCCCCCccccEEeCCeEEEEE
Q psy2677 75 SKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRGTMQKPFEDAAFSLKVGEMSEPVLTESGVHIIL 154 (157)
Q Consensus 75 ~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~~l~~~~~~av~~l~~Geis~pi~t~~G~hIi~ 154 (157)
++++|++++++|+++|++|+.+|++||++||+++++.+||||||+..++|+++|++++|+|++|+||+||+|++|||||+
T Consensus 84 ~~~~A~~~~~~i~~~l~~g~~~F~~lA~~~Sd~~sa~~GGdLG~~~~~~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~ 163 (166)
T 3tc5_A 84 TKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIIL 163 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEECTTSSCHHHHHHHHHSCTTCBCCCEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCccCHHHHHHHhCcccHHhcCCccceecccccCHHHHHHHHhCCCCCCcccEEECCEEEEEE
Confidence 89999999999999999985699999999999999999999999999999999999999999999999999999999999
Q ss_pred EeC
Q psy2677 155 RTA 157 (157)
Q Consensus 155 v~~ 157 (157)
|++
T Consensus 164 v~e 166 (166)
T 3tc5_A 164 RTE 166 (166)
T ss_dssp ECC
T ss_pred EeC
Confidence 975
No 2
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=100.00 E-value=8.4e-38 Score=231.21 Aligned_cols=155 Identities=47% Similarity=0.802 Sum_probs=134.8
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCCCCC------------C-----CCCCcEEEEEEEeeccCCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKPAEA------------S-----GGPEQVQCSHLLVKHKESRKPY 65 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~~~Ili~~~~~~~~~ 65 (157)
++.||++|+++.+++.+..||.|..++..+|..+...... + ..+++|+++||||+.++...|.
T Consensus 5 ~~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~~vs~~ei~~yy~~~~~~~~~~~~~~~~~~~~~hIlv~~~~~~~p~ 84 (177)
T 1yw5_A 5 STGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYGTDKEVLNAYIAKFKNNGYKPLVNEDGQVRVSHLLIKNNQSRKPK 84 (177)
T ss_dssp CCCCCTTEEEEECSSTTCEEEEETTTCCEESSCCTTCCHHHHHHHHHHHHHTTSCCCCCTTSCEEEEEEEECCTTSSSCC
T ss_pred cCCCCchHHHHhcccCCchhhhhHHHhhHhhcCcccCCHHHHHHHHHHhHhhhcccccCCcceEEEEEEEEecCCccCcc
Confidence 4679999999999999999999999999999998764321 3 6889999999999987665554
Q ss_pred CCCccc-hhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCCCCcHHHHHHHhcCCCCCccccE
Q psy2677 66 SWRDDN-ITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRGTMQKPFEDAAFSLKVGEMSEPV 144 (157)
Q Consensus 66 ~~~~~~-~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~~l~~~~~~av~~l~~Geis~pi 144 (157)
+++... ..+++++|++++++|+++|++|+.+|++||++||+++++.+||+|||+..++|+++|++++|+|++|+||+||
T Consensus 85 ~~~~~~~~~~~~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~~sa~~GGdLG~~~~~~l~~~f~~a~f~L~~GeiS~pv 164 (177)
T 1yw5_A 85 SWKSPDGISRTRDESIQILKKHLERILSGEVKLSELANTESDCSSHDRGGDLGFFSKGQMQPPFEEAAFNLHVGEVSNII 164 (177)
T ss_dssp BTTBTTCCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCSGGGGGTTEEEEECTTSSCHHHHHHHHTSCTTCBCCCE
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHcCchhHHHHHHHhCCCcchhcCCccceecccccCHHHHHHHHcCCCCCcCCeE
Confidence 443322 2345788999999999999999337999999999999999999999999999999999999999999999999
Q ss_pred EeCCeEEEEEEeC
Q psy2677 145 LTESGVHIILRTA 157 (157)
Q Consensus 145 ~t~~G~hIi~v~~ 157 (157)
+|++|||||+|++
T Consensus 165 ~t~~G~hIikv~~ 177 (177)
T 1yw5_A 165 ETNSGVHILQRTG 177 (177)
T ss_dssp EETTEEEEEEECC
T ss_pred EECCEEEEEEEeC
Confidence 9999999999975
No 3
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=100.00 E-value=9.4e-35 Score=203.00 Aligned_cols=115 Identities=63% Similarity=1.098 Sum_probs=104.6
Q ss_pred CCCCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCC
Q psy2677 43 SGGPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRG 122 (157)
Q Consensus 43 ~~~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~ 122 (157)
+..|++|+++||||+.++...|.+++..++.+++++|++++++|+++|++|+.+|++||++||+++++.+||+|||+.++
T Consensus 9 ~~~~~~v~~~HILi~~~~~~~p~~~~~~~~~~~~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~~sa~~GGdLG~~~~~ 88 (123)
T 3i6c_A 9 QGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRG 88 (123)
T ss_dssp --CCSEEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEEETT
T ss_pred cCCCcEEEEEEEEEecCCccCccccchhhhhhHHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCCchhhhCCceeeEcCC
Confidence 66899999999999987766676666666677899999999999999999856999999999999999999999999999
Q ss_pred CCcHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 123 TMQKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 123 ~l~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
+|+++|++++|+|++|+||+||+|++|||||+|++
T Consensus 89 ~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~v~E 123 (123)
T 3i6c_A 89 QMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 123 (123)
T ss_dssp TSCHHHHHHHHHSCTTCBCSCEEETTEEEEEEECC
T ss_pred CCCHHHHHHHHhCCCCCccccEEECCEEEEEEEeC
Confidence 99999999999999999999999999999999975
No 4
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=100.00 E-value=1.6e-34 Score=199.77 Aligned_cols=113 Identities=45% Similarity=0.679 Sum_probs=100.7
Q ss_pred CCCcEEEEEEEeeccCCCCCCCCCccc--hhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCC
Q psy2677 45 GPEQVQCSHLLVKHKESRKPYSWRDDN--ITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRG 122 (157)
Q Consensus 45 ~~~~~~~~~Ili~~~~~~~~~~~~~~~--~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~ 122 (157)
.|++|+++||||+.++..++..+.... ...++++|++.+++|+++|++|+.+|++||++||+++++.+||+|||+..+
T Consensus 1 ~pe~vrasHILi~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~~i~~g~~~F~~lA~~~Sd~~sa~~GGdLG~~~~~ 80 (115)
T 2lj4_A 1 MSEKLRAAHLLVKFSGSRNPVSRRTGDSTADVTYEDAIKELQKWSQRIASGEVSFEEAASQRSDCGSYASGGDLGFFSSG 80 (115)
T ss_dssp CCCEEEEEEEEECCTTSSCCCCTTTSSCCTTSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCSGGGGTTSEEEEEETT
T ss_pred CCCcEEEEEEEEecCCccChhhhhhccccccccHHHHHHHHHHHHHHHHcCchhHHHHHHHhCCCcccccCCccceecCC
Confidence 478999999999988776665543222 245678999999999999999966999999999999999999999999999
Q ss_pred CCcHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 123 TMQKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 123 ~l~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
+|+++|++++|+|++|+||+||+|++|||||+|++
T Consensus 81 ~~~~~f~~a~~~l~~GeiS~pv~t~~G~HIIkl~A 115 (115)
T 2lj4_A 81 EMMKPFEDAVRALKIGDISPIVQTDSGLHIIKRLA 115 (115)
T ss_dssp SSCHHHHHHHTTSCBTCBCCCEECSSSEEEEEECC
T ss_pred CCCchHHHHHhcCCCCCCCCcEEeCCeEEEEEEeC
Confidence 99999999999999999999999999999999975
No 5
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=99.97 E-value=1.6e-31 Score=183.46 Aligned_cols=102 Identities=27% Similarity=0.382 Sum_probs=92.2
Q ss_pred CCCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCc-hhhcCCCcccccCC
Q psy2677 44 GGPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCS-SAKRSGDLGPFGRG 122 (157)
Q Consensus 44 ~~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~-~~~~gG~lg~~~~~ 122 (157)
..+++|+++||||+.+... +.++|++++++|+++|++|+.+|++||++||+|+ ++.+||+|||+..+
T Consensus 4 ~~~~~v~~~hIli~~~~~~------------~~~~a~~~a~~i~~~l~~G~~~F~~lA~~~S~d~~s~~~GG~lG~~~~~ 71 (110)
T 4g2p_A 4 ISVTEVHARHILLKPSPIM------------NDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPD 71 (110)
T ss_dssp CCCEEEEEEEEEECCCSSS------------CHHHHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTTEEEEECGG
T ss_pred ccccEEEEEEEEEECCCCC------------CHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCCccccccccccCeeccc
Confidence 4678999999999976532 3568899999999999999339999999999986 89999999999999
Q ss_pred CCcHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 123 TMQKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 123 ~l~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
.|+++|++++|+|++|+||+||+|++|||||+|++
T Consensus 72 ~l~~~f~~a~~~l~~Geis~pv~t~~G~hIikv~~ 106 (110)
T 4g2p_A 72 IFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLD 106 (110)
T ss_dssp GSCHHHHHHHHTCCTTCBCCCEEETTEEEEEEEEE
T ss_pred ccCHHHHHHHHcCCCCCcCccEEECCEEEEEEEEE
Confidence 99999999999999999999999999999999974
No 6
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=99.97 E-value=1.3e-31 Score=184.26 Aligned_cols=99 Identities=24% Similarity=0.395 Sum_probs=90.7
Q ss_pred CCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCCCC
Q psy2677 45 GPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRGTM 124 (157)
Q Consensus 45 ~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~~l 124 (157)
.+++|+++||||+..+ .+.++|++++++|+++|++| .+|++||++||+++++.+||+|||+..++|
T Consensus 4 ~~~~~~v~hIli~~~~-------------~~~~~a~~~A~~i~~~l~~G-~~F~~lA~~~S~d~sa~~GGdlG~~~~~~l 69 (112)
T 3gpk_A 4 GTEEYRIGEIFLAATE-------------ENKPQVFANAEKIVEQLKQG-GSFVAYARQYSEASTAAVGGDLGWIRLAQL 69 (112)
T ss_dssp -CCEEEEEEEEEECCG-------------GGHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCSTTGGGTTEEEEECGGGS
T ss_pred CCcEEEEEEEEEeCCh-------------hhHHHHHHHHHHHHHHHHCC-CCHHHHHHHhCCCcchhcCcccceEccccc
Confidence 4689999999999321 25678999999999999999 799999999999999999999999999999
Q ss_pred cHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 125 QKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 125 ~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
+++|++++|+|++|+||+||+|++|||||+|++
T Consensus 70 ~~~f~~a~~~l~~GeiS~pv~t~~G~hIikv~~ 102 (112)
T 3gpk_A 70 PTELATTAASMGPGQLAGPVEIRGGFSILYLID 102 (112)
T ss_dssp CHHHHHHHHHCCTTCEEEEEEETTEEEEEEEEE
T ss_pred CHHHHHHHHhCCCCCccceEEECCEEEEEEEEe
Confidence 999999999999999999999999999999973
No 7
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=99.97 E-value=9.5e-31 Score=177.43 Aligned_cols=101 Identities=25% Similarity=0.338 Sum_probs=91.0
Q ss_pred CcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCCCCcH
Q psy2677 47 EQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRGTMQK 126 (157)
Q Consensus 47 ~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~~l~~ 126 (157)
++|+++||||+.+...+ ....+++++.+++|+++|++| .+|++||++||+++++.+||+|||+..+.|++
T Consensus 1 ~~~~~~hIli~~~~~~~---------~~~~~~a~~~a~~i~~~l~~g-~~F~~lA~~~S~~~s~~~gG~lg~~~~~~l~~ 70 (103)
T 2pv1_A 1 TELNLSHILIPLPENPT---------SDQVNEAESQARAIVDQARNG-ADFGKLAIAHSADQQALNGGQMGWGRIQELPG 70 (103)
T ss_dssp CCEEEEEEEEECCSSCC---------HHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCSTTGGGTTEEEEECGGGSCH
T ss_pred CcEEEEEEEEECCCCCC---------HHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHhCCCcccccCCccceEchhhcCH
Confidence 36999999999875433 234567888899999999999 79999999999998999999999999999999
Q ss_pred HHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 127 PFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 127 ~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
+|++++|+|++|+||+||+|++|||||+|++
T Consensus 71 ~f~~a~~~l~~G~is~pv~t~~G~hii~v~~ 101 (103)
T 2pv1_A 71 IFAQALSTAKKGDIVGPIRSGVGFHILKVND 101 (103)
T ss_dssp HHHHHTTTCCTTCEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHcCCCCCeeccEEECCEEEEEEEEE
Confidence 9999999999999999999999999999974
No 8
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=99.97 E-value=1.1e-29 Score=174.35 Aligned_cols=107 Identities=35% Similarity=0.489 Sum_probs=93.9
Q ss_pred CCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCc-hhhcCCCcccccCCC
Q psy2677 45 GPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCS-SAKRSGDLGPFGRGT 123 (157)
Q Consensus 45 ~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~-~~~~gG~lg~~~~~~ 123 (157)
.+++|+++||||+.++..++.. ..+++++++.+++|+++|++|+.+|++||++||+++ ++.+||+|||+..+.
T Consensus 4 ~~~~~~~~hIli~~~~~~~~~~------~~~~~~~~~~a~~i~~~l~~g~~~F~~lA~~~S~d~~s~~~gG~lG~~~~~~ 77 (111)
T 2jzv_A 4 GSDSKKASHILIKVKSKKSDKE------GLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQ 77 (111)
T ss_dssp CCSEEEEEEEEEEBCSCSSCSS------SBCHHHHHHHHHHHHHHHHSCTTSHHHHHHHHCSCHHHHTTTTEEEEEETTS
T ss_pred CCcEEEEEEEEEECCCCCChhh------hhhHHHHHHHHHHHHHHHHcCcccHHHHHHHHCCCcchhhhCCccceecCCc
Confidence 5789999999999876654321 113567788889999999998569999999999987 999999999999999
Q ss_pred CcHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 124 MQKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 124 l~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
|+++|++++|+|++|+||+||+|++|||||+|++
T Consensus 78 l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v~~ 111 (111)
T 2jzv_A 78 TDKDFEKALFKLKDGEVSEVVKSSFGYHIIKADK 111 (111)
T ss_dssp SCHHHHHHHHTCCTTCBCCCEEETTEEEEEEECC
T ss_pred ccHHHHHHHHhCCCCCcCccEEECCEEEEEEEeC
Confidence 9999999999999999999999999999999974
No 9
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=99.96 E-value=1.6e-30 Score=185.20 Aligned_cols=116 Identities=57% Similarity=0.925 Sum_probs=97.8
Q ss_pred CCCCCCcEEEEEEEeeccCCCCCCCCCccc----hhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcc
Q psy2677 42 ASGGPEQVQCSHLLVKHKESRKPYSWRDDN----ITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLG 117 (157)
Q Consensus 42 ~~~~~~~~~~~~Ili~~~~~~~~~~~~~~~----~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg 117 (157)
.+..+++|+++||||+.+....|.++.... ..+++++|++++++|+++|++|+.+|++||++||+++++.+||+||
T Consensus 20 ~f~~~~~v~~~HILi~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~i~~~l~~G~~~F~~lA~~~S~~~sa~~GGdLG 99 (139)
T 1j6y_A 20 HMASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLG 99 (139)
T ss_dssp CCSSCCSCEEECCEECSCTTSSSSSCSCCCSCCCSCCCHHHHHHHHHHHHHHHHSSCCCCHHHHHHSSCHHHHHTCSEEE
T ss_pred HcCCCCeEEEEEEEEecCccccccccccccccccchHHHHHHHHHHHHHHHHHHcCcccHHHHHHHhccCchhhcCCeee
Confidence 467889999999999976543332221110 1235688999999999999999336999999999988999999999
Q ss_pred cccCCCCcHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 118 PFGRGTMQKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 118 ~~~~~~l~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
|+..++|+++|++++|+|++|+||+||+|++|||||+|++
T Consensus 100 ~~~~~~l~~~f~~a~~~l~~GeiS~pv~t~~G~hIikv~~ 139 (139)
T 1j6y_A 100 SFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 139 (139)
T ss_dssp ECSSSSSCTHHHHHHHHCCSSSCCSCEEETTEEECCCSCC
T ss_pred eecccccCHHHHHHHHcCCCCCccccEEECCEEEEEEEeC
Confidence 9999999999999999999999999999999999999975
No 10
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=99.96 E-value=3.7e-29 Score=166.40 Aligned_cols=89 Identities=43% Similarity=0.622 Sum_probs=80.8
Q ss_pred CcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCCCCcH
Q psy2677 47 EQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRGTMQK 126 (157)
Q Consensus 47 ~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~~l~~ 126 (157)
++++++||+++. ++ .+++|+++|++| .+|+++|++||+++++.+||+|||+..++|++
T Consensus 2 ~~~~~~hIl~~~-----------------~~----~A~~i~~~l~~g-~~F~~lA~~~S~~~s~~~gGdlg~~~~~~l~~ 59 (92)
T 1jns_A 2 KTAAALHILVKE-----------------EK----LALDLLEQIKNG-ADFGKLAKKHSICPSGKRGGDLGEFRQGQMVP 59 (92)
T ss_dssp CEEEEEEEEESS-----------------HH----HHHHHHHHHHHT-CCHHHHHHHHHCSTTTTTGGGCCEEETTSSCH
T ss_pred CEEEEEEEEeCC-----------------HH----HHHHHHHHHHCC-CCHHHHHHHhCCCcchhcCCeeeEEcCcccCH
Confidence 589999999973 23 356667788899 79999999999988999999999999999999
Q ss_pred HHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 127 PFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 127 ~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
+|++++|+|++|+||+||+|++|||||+|++
T Consensus 60 ~f~~a~~~l~~G~is~pv~t~~G~hIi~v~~ 90 (92)
T 1jns_A 60 AFDKVVFSCPVLEPTGPLHTQFGYHIIKVLY 90 (92)
T ss_dssp HHHHHHHHSCTTCCEEEEEETTEEEEEEEEC
T ss_pred HHHHHHHhCCCCCcCCcEEECCEEEEEEEEe
Confidence 9999999999999999999999999999974
No 11
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=99.96 E-value=8.7e-29 Score=166.13 Aligned_cols=93 Identities=51% Similarity=0.828 Sum_probs=83.4
Q ss_pred CCCCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhC-CCchhhcCCCcccccC
Q psy2677 43 SGGPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFS-DCSSAKRSGDLGPFGR 121 (157)
Q Consensus 43 ~~~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS-~~~~~~~gG~lg~~~~ 121 (157)
+..+++++++||+++. ++.+++|+++|++| .+|+++|++|| +++++.+||+|||+..
T Consensus 4 ~~~~~~~~~~hIl~~~---------------------~~~A~~i~~~l~~g-~~F~~lA~~~S~d~~s~~~GG~lG~~~~ 61 (97)
T 2rqs_A 4 GSMADKIKCSHILVKK---------------------QGEALAVQERLKAG-EKFGKLAKELSIDGGSAKRDGSLGYFGR 61 (97)
T ss_dssp CCCCCSEEEEEEEESC---------------------HHHHHHHHHHHTTT-CCHHHHHHHTCCCCGGGGGTTEEEEECT
T ss_pred ccccceEEEEEEEeCC---------------------HHHHHHHHHHHHCC-CCHHHHHHHhCCCCcchhcCceeeeEcC
Confidence 4578999999999972 23346667789999 79999999999 5689999999999999
Q ss_pred CCCcHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 122 GTMQKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 122 ~~l~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
++|+++|++++++|++|+||+||+|++|||||+|++
T Consensus 62 ~~l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v~d 97 (97)
T 2rqs_A 62 GKMVKPFEDAAFRLQVGEVSEPVKSEFGYHVIKRLG 97 (97)
T ss_dssp TSSCHHHHHHHTTCTTSCBCCCEECSSCEEEEEECC
T ss_pred CCCCHHHHHHHHcCCCCCccccEEECCEEEEEEEeC
Confidence 999999999999999999999999999999999975
No 12
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=99.96 E-value=5.9e-29 Score=165.64 Aligned_cols=90 Identities=40% Similarity=0.675 Sum_probs=80.8
Q ss_pred CCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCccccc-CCCC
Q psy2677 46 PEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFG-RGTM 124 (157)
Q Consensus 46 ~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~-~~~l 124 (157)
+++|+++||+++. ++.+++|+++|++| .+|+++|++||+++++.+||+|||+. .+.|
T Consensus 2 ~~~~~~~hIl~~~---------------------~~~A~~i~~~l~~g-~~F~~lA~~~S~~~s~~~gG~lg~~~~~~~l 59 (93)
T 1zk6_A 2 SGKIRASHILVAD---------------------KKTAEEVEKKLKKG-EKFEDLAKEYSTDSSASKGGDLGWFAKEGQM 59 (93)
T ss_dssp -CCEEEEEEEESS---------------------HHHHHHHHHHHHHT-CCHHHHHHHHCCSGGGGGTTEEEEECTTTSS
T ss_pred CCEEEEEEEEecc---------------------HHHHHHHHHHHHCC-CCHHHHHHHhCCCchhhhCCeeeeecccccC
Confidence 5789999999972 23456667788899 79999999999988999999999999 9999
Q ss_pred cHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 125 QKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 125 ~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
+++|++++++|++|+||+||+|++|||||+|.+
T Consensus 60 ~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v~~ 92 (93)
T 1zk6_A 60 DETFSKAAFKLKTGEVSDPVKTQYGYHIIKKTE 92 (93)
T ss_dssp CTTHHHHHHHSCTTCBCCCEECSSCEEEEEEEE
T ss_pred CHHHHHHHHcCCCCCccceEEECCEEEEEEEec
Confidence 999999999999999999999999999999973
No 13
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=99.95 E-value=3.5e-28 Score=164.34 Aligned_cols=90 Identities=37% Similarity=0.668 Sum_probs=79.9
Q ss_pred CCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCCCC
Q psy2677 45 GPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRGTM 124 (157)
Q Consensus 45 ~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~~l 124 (157)
.+++|+++||+|+. +++ +++++++|++| ++|++||++||+++ +.+||+|||+..++|
T Consensus 4 g~~~v~~~~Ilv~~-----------------~~~----A~~i~~~l~~G-~~F~~lA~~~S~d~-a~~GGdlG~~~~~~l 60 (101)
T 3ui4_A 4 GSNAVKVRHILCEK-----------------HGK----IMEAMEKLKSG-MRFNEVAAQYSEDK-ARQGGDLGWMTRGSM 60 (101)
T ss_dssp GGCEEEEEEEEESS-----------------HHH----HHHHHHHHHTT-CCHHHHHHHHCSSS-GGGTTEEEEEETTSS
T ss_pred CCcEEEEEEEEECC-----------------HHH----HHHHHHHHHCC-CCHHHHHHHhCcCc-hhcCCceeeEcCCCC
Confidence 45899999999982 334 45566688899 79999999999885 789999999999999
Q ss_pred cHHHHHHHhcCCCCCccc------cEEeCCeEEEEEEeC
Q psy2677 125 QKPFEDAAFSLKVGEMSE------PVLTESGVHIILRTA 157 (157)
Q Consensus 125 ~~~~~~av~~l~~Geis~------pi~t~~G~hIi~v~~ 157 (157)
+++|++++|+|++|+||+ ||+|++|||||+|++
T Consensus 61 ~~~f~~a~~~l~~G~vs~~~~~~~pv~t~~G~hIikv~~ 99 (101)
T 3ui4_A 61 VGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMVEG 99 (101)
T ss_dssp CHHHHHHHHTSCCCBTTBCCBCSSCEEETTEEEEEEEEE
T ss_pred CHHHHHHHHhCCCCCCccCcccCCcEEECCEEEEEEEEe
Confidence 999999999999999997 999999999999974
No 14
>2kgj_A Peptidyl-prolyl CIS-trans isomerase D; prolyl isomerase, parvulin, cell inner membrane, cell membrane, membrane, rotamase, stress response; NMR {Escherichia coli}
Probab=99.94 E-value=8.8e-28 Score=162.67 Aligned_cols=90 Identities=21% Similarity=0.348 Sum_probs=79.7
Q ss_pred CcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCc-hhhcCCCcccccCCCCc
Q psy2677 47 EQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCS-SAKRSGDLGPFGRGTMQ 125 (157)
Q Consensus 47 ~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~-~~~~gG~lg~~~~~~l~ 125 (157)
++|+++|||+... + ++.+++|+++|++| ++|++||++||+++ ++.+||+|||+..+.|+
T Consensus 2 ~~~~~~hIl~~~~---------------~----~~~A~~i~~~l~~G-~~F~~lA~~~S~d~~sa~~GGdlG~~~~~~l~ 61 (102)
T 2kgj_A 2 QPQRTRYSIIQTK---------------T----EDEAKAVLDELNKG-GDFAALAKEKSADIISARNGGDMGWLEDATIP 61 (102)
T ss_dssp CCCEEEEEEEEES---------------S----HHHHHHHHHHHHHT-SCHHHHHHHTCTTHHHHTTTSEEEEEETTCCC
T ss_pred CEEEEEeeecChh---------------h----HHHHHHHHHHHHCC-CCHHHHHHHhCCCchhhhcCCccceecccccC
Confidence 6799999998631 1 34456667788889 79999999999987 89999999999999999
Q ss_pred HHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 126 KPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 126 ~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
++|++++|+ ++|+||+||+|++|||||+|++
T Consensus 62 ~~f~~a~~~-~~GeiS~pv~t~~G~hIikv~~ 92 (102)
T 2kgj_A 62 DELKNAGLK-EKGQLSGVIKSSVGFLIVRLDD 92 (102)
T ss_dssp HHHHTTCCC-STTCEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHhc-CCCCccccEEECCEEEEEEEee
Confidence 999999999 9999999999999999999973
No 15
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=99.88 E-value=5.3e-23 Score=164.48 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=87.2
Q ss_pred CCcEEEEEEEe-eccCCCCCCCCCccchhhhHHHHHHHHHHHHHH-HhcChhhHHHHHHhhCCCc-hhhcCCCcccccCC
Q psy2677 46 PEQVQCSHLLV-KHKESRKPYSWRDDNITRSKEEAIELVKSYREQ-INTGKASFGELASKFSDCS-SAKRSGDLGPFGRG 122 (157)
Q Consensus 46 ~~~~~~~~Ili-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~-l~~g~~~F~~lA~~yS~~~-~~~~gG~lg~~~~~ 122 (157)
+.+++++||+| +.++. ....+++++.+++|+++ |++| .+|++||++||+++ ++.+||+|||+..+
T Consensus 157 ~~~~~~~~Ili~~~~~~-----------~~~~~~~~~~a~~i~~~~l~~g-~~F~~lA~~~S~d~~s~~~gG~lg~~~~~ 224 (325)
T 3nrk_A 157 GFEIRYRIISIAPENDS-----------IQEENRLYKEVSEIRKSILADP-SSFALIAGSPRNDPALRARRGMVEWISSF 224 (325)
T ss_dssp CEEEEEEEEEECCSSSC-----------HHHHHHHHHHHHHHHHHHHHCT-THHHHHHHSTTSCHHHHHTTTEEEEEEHH
T ss_pred CcceEEEEEEEecCCCC-----------ccchHHHHHHHHHHHHHHHhCC-CCHHHHHHHhCCCccccccCCcccccccc
Confidence 57899999999 55432 11235788889999999 8999 79999999999885 55899999999999
Q ss_pred CCc---HHHHHHHhcCCCCCccccEEeCC-eEEEEEEeC
Q psy2677 123 TMQ---KPFEDAAFSLKVGEMSEPVLTES-GVHIILRTA 157 (157)
Q Consensus 123 ~l~---~~~~~av~~l~~Geis~pi~t~~-G~hIi~v~~ 157 (157)
.|+ ++|.+++|+|++|+||+||+|++ |||||+|++
T Consensus 225 ~l~~~~~~~~~a~~~l~~Geis~pv~t~~~G~hIikv~~ 263 (325)
T 3nrk_A 225 DLYKYSKITATIAAPLPNGGVSEVFRDERKRYCILKIEG 263 (325)
T ss_dssp HHHHHCHHHHHHHTTCCTTCBCCCEECTTSCEEEEEEEE
T ss_pred cccccCHHHHHHHHcCCCCCCCceEEeCCCeEEEEEEec
Confidence 999 99999999999999999999999 999999974
No 16
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=99.87 E-value=1.8e-22 Score=155.81 Aligned_cols=94 Identities=43% Similarity=0.641 Sum_probs=79.0
Q ss_pred CCCCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHh--cCh---hhHHHHHHhhCCCch-hhcCCCc
Q psy2677 43 SGGPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQIN--TGK---ASFGELASKFSDCSS-AKRSGDL 116 (157)
Q Consensus 43 ~~~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~--~g~---~~F~~lA~~yS~~~~-~~~gG~l 116 (157)
+..|++++++||+|+. ++.| +.+.++|+ +|+ .+|+++|++||++++ +.+||++
T Consensus 107 f~~~~~~~~~~I~~~~-----------------~~~A----~~~~~~l~~~~g~~~~~~F~~lA~~~S~~~~~~~~gGdl 165 (252)
T 3rfw_A 107 YVKPARVQAKHILVAT-----------------EKEA----KDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGEL 165 (252)
T ss_dssp SEECCEEEEEEEEESS-----------------HHHH----HHHHHHHTTCCHHHHHHHHHHHHHHHCCCTTTGGGTTEE
T ss_pred ccccceEEEEEEEeCC-----------------HHHH----HHHHHHHHhhcCCCccccHHHHHHHhCCCCchhhcCCcc
Confidence 5568999999999983 2344 34555777 342 499999999998764 4569999
Q ss_pred ccccCCCCcHHHHHHHhcCCCCCcc-ccEEeCCeEEEEEEeC
Q psy2677 117 GPFGRGTMQKPFEDAAFSLKVGEMS-EPVLTESGVHIILRTA 157 (157)
Q Consensus 117 g~~~~~~l~~~~~~av~~l~~Geis-~pi~t~~G~hIi~v~~ 157 (157)
||+..+.|+++|.+++++|++|++| +||+|++|||||+|++
T Consensus 166 g~~~~~~l~~~f~~a~~~l~~G~is~~pv~t~~G~hii~v~~ 207 (252)
T 3rfw_A 166 GWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKEN 207 (252)
T ss_dssp EEECSSSSCHHHHHHHHHSCTTEECSSCEEETTEEEEEEEEE
T ss_pred cccccccccHHHHHHHHcCCCCCccCceEEECCEEEEEEEEE
Confidence 9999999999999999999999999 5999999999999973
No 17
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=99.87 E-value=2.8e-22 Score=163.81 Aligned_cols=105 Identities=24% Similarity=0.331 Sum_probs=90.8
Q ss_pred CCCCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCC
Q psy2677 43 SGGPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRG 122 (157)
Q Consensus 43 ~~~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~ 122 (157)
+..+++++++||+|+.+...+ .....++++.+++|+++|++| .+|+++|++||+++++.+||+|||+..+
T Consensus 148 ~~~~~~~~~~~i~i~~~~~~s---------~~~~~~~~~~a~~~~~~l~~g-~~F~~lA~~~S~~~~~~~gG~lg~~~~~ 217 (408)
T 1m5y_A 148 NDASTELNLSHILIPLPENPT---------SDQVNEAESQARAIVDQARNG-ADFGKLAIAHSADQQALNGGQMGWGRIQ 217 (408)
T ss_dssp ----CCEEEEEEEEECCSSCC---------HHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCSTTGGGTTEEEEECGG
T ss_pred cCCcccEEEEEEEEeCCCCCC---------HHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHcCCCcccccCCcccccchh
Confidence 457889999999999765433 224456788889999999999 7999999999999899999999999999
Q ss_pred CCcHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 123 TMQKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 123 ~l~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
.|+++|.+++++|++|+||+||+|++|||||+|.+
T Consensus 218 ~l~~~~~~~~~~l~~G~vs~pv~~~~g~~iikv~~ 252 (408)
T 1m5y_A 218 ELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVND 252 (408)
T ss_dssp GSCHHHHTGGGTCCTTCEEEEEEETTEEEEEEEEE
T ss_pred hccHHHHHHHHhCCCCCccCeeecCCeEEEEEEEE
Confidence 99999999999999999999999999999999863
No 18
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=99.84 E-value=1.2e-20 Score=154.10 Aligned_cols=100 Identities=30% Similarity=0.414 Sum_probs=89.5
Q ss_pred CCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChh-hHHHHHHhhCCC-chhhcCCCcccccCC
Q psy2677 45 GPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKA-SFGELASKFSDC-SSAKRSGDLGPFGRG 122 (157)
Q Consensus 45 ~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~-~F~~lA~~yS~~-~~~~~gG~lg~~~~~ 122 (157)
..++++++|||+..... ...++|++.+++++++|++| . +|+++|++||.+ .++.+||++||+.++
T Consensus 261 ~~~~~~~~~Il~~~~~~------------~~~~~a~~~a~~~~~~l~~g-~~~f~~~A~~~s~~~~s~~~gg~lg~~~~~ 327 (408)
T 1m5y_A 261 SVTEVHARHILLKPSPI------------MTDEQARVKLEQIAADIKSG-KTTFAAAAKEFSQDPGSANQGGDLGWATPD 327 (408)
T ss_dssp CCEEEEEEEEEECCCSS------------SCHHHHHHHHHHHHHHHHTT-SSCHHHHHHHHCCCTTTGGGTTEEEEECGG
T ss_pred cccchhhheeeecCCCC------------cCHHHHHHHHHHHHHHHHcC-cccHHHHHHHhCCCcchhhcCCcCcccCcc
Confidence 45889999999986432 13567888899999999998 6 999999999987 588999999999999
Q ss_pred CCcHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 123 TMQKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 123 ~l~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
.|+++|.+++|+|++|++|+||+|++|||||+|++
T Consensus 328 ~~~~~~~~a~f~l~~G~~s~~v~~~~g~~ii~v~~ 362 (408)
T 1m5y_A 328 IFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLD 362 (408)
T ss_dssp GSCHHHHHHHHTCCTTCBCCCEECSSCEEEEEEEE
T ss_pred cchHHHHHHHHcCCCCCccCcEeeCCeEEEEEEee
Confidence 99999999999999999999999999999999973
No 19
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=99.59 E-value=5.5e-16 Score=119.41 Aligned_cols=76 Identities=11% Similarity=0.030 Sum_probs=64.2
Q ss_pred CCCCCcEEEEEEEeeccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCchhhcCCCcccccCC
Q psy2677 43 SGGPEQVQCSHLLVKHKESRKPYSWRDDNITRSKEEAIELVKSYREQINTGKASFGELASKFSDCSSAKRSGDLGPFGRG 122 (157)
Q Consensus 43 ~~~~~~~~~~~Ili~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~~~~gG~lg~~~~~ 122 (157)
|..|++|+++||++.. ++ +.++|++| .+|+ .||++||+..+
T Consensus 130 f~~~~~v~~~~i~~~~-----------------~~--------~~~~l~~g-~~f~-------------l~g~lg~~~~~ 170 (252)
T 3rgc_A 130 FTFYTQINANIYLSNN-----------------PQ--------TLENIKNT-KKTI-------------LKPQNASLNTS 170 (252)
T ss_dssp CCEESEEEEEEEECSC-----------------HH--------HHHHHHHH-CCCC-------------SCCEEEEEETT
T ss_pred cCCCceEEEEEecCCC-----------------HH--------HHHHHHhC-CCcc-------------cccccceecHH
Confidence 5677899999999641 11 22466777 6886 27999999999
Q ss_pred CCcHHHHHHHhcCCCCCccccEEeCCeEEEEEEeC
Q psy2677 123 TMQKPFEDAAFSLKVGEMSEPVLTESGVHIILRTA 157 (157)
Q Consensus 123 ~l~~~~~~av~~l~~Geis~pi~t~~G~hIi~v~~ 157 (157)
.|+|+|.+++++|++|++|+||+|++|||||+|++
T Consensus 171 ~l~~~~~~a~~~l~~G~is~pv~t~~G~hiikv~~ 205 (252)
T 3rgc_A 171 NADPRLLGLLSQIPVGSFSPVLNGKNGYELYEVKS 205 (252)
T ss_dssp TSCHHHHHHHHHSCTTCBCCCBTTTTCEEEEEEEE
T ss_pred hcCHHHHHHHHcCCCCCcCCcEEeCCeEEEEEEec
Confidence 99999999999999999999999999999999973
No 20
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.84 E-value=1.5e-09 Score=64.48 Aligned_cols=39 Identities=46% Similarity=0.842 Sum_probs=36.6
Q ss_pred CCCCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 1 MGDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 1 ~~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
|++.+||+||+.+.+.+.++.||+|+.|+.++|+.|...
T Consensus 3 m~~~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 3 MVNTGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCCCCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCCCCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 889999999999999889999999999999999999764
No 21
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.64 E-value=1.2e-08 Score=57.70 Aligned_cols=39 Identities=41% Similarity=0.995 Sum_probs=34.9
Q ss_pred CCCCCCCcchhhhcccCCCceeeEeeecccccccCCCCCC
Q psy2677 1 MGDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKPA 40 (157)
Q Consensus 1 ~~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~~ 40 (157)
.++.+||.+|+.+.+ ..++.||+|+.++.++|+.|..++
T Consensus 3 ~~~~~LP~GWe~~~d-~~Gr~YY~n~~t~~T~We~P~~~~ 41 (43)
T 2dmv_A 3 SGSSGLPPGWEQRVD-QHGRVYYVDHVEKRTTWDRPSGPS 41 (43)
T ss_dssp SSCCSCCTTEEEEEC-TTSCEEEEETTTCCEESSCSSSCC
T ss_pred CCCCCCCCCceEEEC-CCCCEEEEECCCCCEecCCcCCCC
Confidence 367899999999999 689999999999999999998754
No 22
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.60 E-value=1.7e-08 Score=56.21 Aligned_cols=37 Identities=27% Similarity=0.676 Sum_probs=33.3
Q ss_pred CCCCCCCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 1 MGDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 1 ~~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
.++.+||.+|+.+.+ ..++.||+|+.++.++|+.|..
T Consensus 3 ~~~~~LP~gWe~~~~-~~G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 3 SGSSGLPEGWEMRFT-VDGIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCCCCCCSSEEEEEC-TTCCEEEEETTTCCEESSCTTT
T ss_pred CCcCCCCcCcEEEEc-CCCCEEEEECCCCcEecCCCCC
Confidence 367899999999998 8999999999999999998853
No 23
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=98.57 E-value=2.2e-08 Score=54.36 Aligned_cols=35 Identities=40% Similarity=0.991 Sum_probs=31.9
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
++.+||++|+.+.+ ..++.||+|+.++.++|+.|.
T Consensus 1 g~~~LP~gWe~~~d-~~g~~Yy~n~~t~~t~W~~P~ 35 (36)
T 1wr4_A 1 GSPGLPSGWEERKD-AKGRTYYVNHNNRTTTWTRPI 35 (36)
T ss_dssp CCTTCCTTEEEEEC-SSSCEEEEETTTTEEESSCCC
T ss_pred CCCCCCCCCEEEEC-CCCCEEEEECCCCCEeCcCCC
Confidence 56799999999998 699999999999999999874
No 24
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=98.56 E-value=2.4e-08 Score=58.00 Aligned_cols=37 Identities=35% Similarity=0.740 Sum_probs=33.0
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKPA 40 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~~ 40 (157)
..+||++|+++.+ ..++.||+||.++.++|+.|..+.
T Consensus 11 ~~~LP~GWe~~~d-~~Gr~YYvnh~t~~T~We~P~~~~ 47 (49)
T 2zaj_A 11 ELELPAGWEKIED-PVYGIYYVDHINRKTQYENPSGPS 47 (49)
T ss_dssp SSCCCTTEEEEEE-TTTEEEEEETTTTEEESSCCCSSC
T ss_pred CCCCCcCceEEEc-CCCCEEEEeCCCCCEecCCCCCCC
Confidence 3569999999998 789999999999999999998653
No 25
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=98.54 E-value=3.7e-08 Score=56.53 Aligned_cols=37 Identities=19% Similarity=0.675 Sum_probs=33.7
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
++.+||.+|+.+.+ ..++.||+|+.++.++|+.|...
T Consensus 7 ~~~~LP~gWe~~~~-~~Gr~Yyinh~t~~TtW~~Pr~~ 43 (46)
T 2ez5_W 7 EEEPLPPRWSMQVA-PNGRTFFIDHASRRTTWIDPRNG 43 (46)
T ss_dssp CSCCCCTTEEEEEC-TTSSEEEEETTTTEEESBCTTTC
T ss_pred CCCCCCcCcEEEEc-CCCCEEEEECCCCCEeccCCCCC
Confidence 56789999999998 78999999999999999998764
No 26
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.53 E-value=3.8e-08 Score=54.79 Aligned_cols=35 Identities=34% Similarity=0.849 Sum_probs=31.9
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
++.+||.+|+.+.+ ..++.||+|+.++.++|+.|.
T Consensus 4 ~~~~LP~gWe~~~~-~~Gr~Yy~nh~t~~ttW~~P~ 38 (40)
T 2ysg_A 4 GSSGLPYGWEEAYT-ADGIKYFINHVTQTTSWIHPV 38 (40)
T ss_dssp SSSCCCTTEEEEEC-SSSCEEEEESSSCCEECCCCC
T ss_pred CcCCCCCCcEEEEc-CCCCEEEEECCCCcCcCCCCC
Confidence 45679999999998 899999999999999999885
No 27
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=98.53 E-value=4e-08 Score=55.28 Aligned_cols=37 Identities=30% Similarity=0.733 Sum_probs=33.4
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
+..+||.+|+.+.+ ..++.||+|+.++.++|+.|...
T Consensus 4 ~~~~LP~GWe~~~~-~~G~~Yy~nh~t~~ttW~~Pr~~ 40 (42)
T 2djy_A 4 GSGPLPPGWEIRNT-ATGRVYFVDHNNRTTQFTDPRLS 40 (42)
T ss_dssp CCSCCCSSEEEEEC-SSSCEEEEETTTTEEESSCTTTS
T ss_pred CcCCCCcCcEEEEC-CCCCEEEEECCCCCEeCCCCCCC
Confidence 45789999999998 89999999999999999998764
No 28
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=98.51 E-value=3.7e-08 Score=53.52 Aligned_cols=35 Identities=40% Similarity=1.025 Sum_probs=31.6
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
+..+||++|+.+.+ ..++.||+|+.++.++|+.|.
T Consensus 1 g~~~LP~GWe~~~d-~~G~~Yy~n~~t~~t~We~P~ 35 (36)
T 1wr3_A 1 GSPPLPPGWEEKVD-NLGRTYYVNHNNRSTQWHRPS 35 (36)
T ss_dssp CCSCSCTTEEEEEC-SSSCEEEEETTTCCEESSCSC
T ss_pred CCCCCCCCCEEEEC-CCCCEEEEECCCCCEeeeCcC
Confidence 45789999999998 799999999999999999874
No 29
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.49 E-value=5.3e-08 Score=56.57 Aligned_cols=37 Identities=30% Similarity=0.771 Sum_probs=33.3
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKPA 40 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~~ 40 (157)
+.+||.+|+.+.+ ..++.||+|+.++.++|+.|....
T Consensus 9 ~~~LP~gWe~~~~-~~Gr~Yy~nh~t~~T~W~~P~~~~ 45 (49)
T 2ysb_A 9 DLPLPPGWSVDWT-MRGRKYYIDHNTNTTHWSHPLESG 45 (49)
T ss_dssp CCCCCTTEEEEEC-SSSCEEEEETTTTEEESSCTTTSC
T ss_pred CCCCCCCceEEEC-CCCCEEEEEcCCCCEEecCCCCCC
Confidence 5679999999998 689999999999999999998753
No 30
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.47 E-value=5.3e-08 Score=56.55 Aligned_cols=36 Identities=39% Similarity=0.728 Sum_probs=32.7
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
+.+||+||+++.+ ..++.||+|+.++.++|+.|..+
T Consensus 11 ~~~LP~GWe~~~d-~~g~~YYvnh~t~~T~We~P~~~ 46 (49)
T 2dwv_A 11 REGLPPGWERVES-SEFGTYYVDHTNKRAQYRHPSGP 46 (49)
T ss_dssp SSCCCTTEEEEEE-TTTEEEEEETTTTEEESSCCCCC
T ss_pred CCCCCcCcEEEEC-CCCCEEEEECCCCCEeccCcCCC
Confidence 4679999999999 68999999999999999999865
No 31
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=98.47 E-value=4.3e-08 Score=53.95 Aligned_cols=35 Identities=37% Similarity=0.822 Sum_probs=30.6
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
.+.+||++|+.+.+ ..++.||+|+.++.++|+.|.
T Consensus 3 ~~~~LP~gWe~~~~-~~G~~Yy~nh~t~~ttW~~Pr 37 (38)
T 2law_A 3 MEGPLPDGWEQAMT-QDGEIYYINHKNKTTSWLDPR 37 (38)
T ss_dssp --CCCSSSCCEEEE-TTTEEEEEETTTTEEESSCTT
T ss_pred ccCCCCCCcEEEEC-CCCCEEEEECCCCCEeCCCCC
Confidence 45789999999998 889999999999999999874
No 32
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=98.46 E-value=4.6e-08 Score=54.74 Aligned_cols=35 Identities=31% Similarity=0.819 Sum_probs=32.0
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
++.+||.+|+.+.+ ..++.||+|+.++.++|+.|.
T Consensus 5 ~~~~LP~gWe~~~~-~~G~~Yy~n~~t~~t~We~Pr 39 (41)
T 1wr7_A 5 IQSFLPPGWEMRIA-PNGRPFFIDHNTKTTTWEDPR 39 (41)
T ss_dssp CCCSSCTTEEEEEC-TTSCEEEEETTTTEEESSCGG
T ss_pred ccCCCCCCcEEEEc-CCCCEEEEECCCCCeecCCCC
Confidence 57889999999998 689999999999999999875
No 33
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.42 E-value=7.6e-08 Score=53.21 Aligned_cols=34 Identities=38% Similarity=0.882 Sum_probs=29.7
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
++.+||++|+++.+.. |. ||+|+.++.++|+.|.
T Consensus 5 ~~~~LP~GWe~~~~~~-G~-YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 5 SSGGLPPGWRKIHDAA-GT-YYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCCCTTEEEEEETT-EE-EEEESSSCCEESSCCC
T ss_pred CCCCCCCCcEEEEcCC-CC-EEEEcCCCCEeccCCC
Confidence 5788999999998844 75 9999999999999875
No 34
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=5.4e-08 Score=58.81 Aligned_cols=35 Identities=34% Similarity=0.676 Sum_probs=31.7
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
+.+||++|+++.+ ..++.||+||.++.++|+.|..
T Consensus 11 ~~~LP~GWE~~~d-~~Gr~YYvnh~tk~T~We~P~~ 45 (60)
T 2yse_A 11 ELELPAGWEKIED-PVYGIYYVDHINRKTQYENPVL 45 (60)
T ss_dssp CSSCCSSEEEEEC-SSSCEEEEETTTTEEESSCHHH
T ss_pred CCCCCCCcEEEEC-CCCCEEEEeCCCCCeeccCCCc
Confidence 4679999999999 7899999999999999998864
No 35
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=98.38 E-value=1.2e-07 Score=52.47 Aligned_cols=34 Identities=41% Similarity=1.037 Sum_probs=31.1
Q ss_pred CCCCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 4 EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 4 ~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
.+||++|+.+.+ ..++.||+|+.++.++|+.|.-
T Consensus 5 ~~LP~gWe~~~d-~~G~~YY~n~~t~~t~We~P~~ 38 (39)
T 2kyk_A 5 GPLPPGWERRVD-NMGRIYYVDHFTRTTTWQRPTL 38 (39)
T ss_dssp CCCCSSCEEEEC-TTSCEEEECSSSCCEECCCCCC
T ss_pred CCCCCCcEEEEc-CCCCEEEEECCCCCEeccCCCC
Confidence 579999999988 6999999999999999999863
No 36
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.38 E-value=1.4e-07 Score=52.35 Aligned_cols=36 Identities=42% Similarity=1.022 Sum_probs=32.7
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
++.+||.+|+.+.+ ..++.||+|+.++.++|+.|..
T Consensus 4 ~~~~LP~gW~~~~d-~~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 4 GSSGLPPGWQSYLS-PQGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp CCSSCCTTCEEEEC-TTSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCCCceEEEC-CCCCEEEEECCCCCEeCCCCCC
Confidence 67889999999998 6899999999999999999853
No 37
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=98.37 E-value=1.6e-07 Score=54.73 Aligned_cols=36 Identities=33% Similarity=0.839 Sum_probs=32.6
Q ss_pred CCCCcchhhhcccCCCceeeEeeecccccccCCCCCC
Q psy2677 4 EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKPA 40 (157)
Q Consensus 4 ~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~~ 40 (157)
.+||++|+.+.+ ..++.||+|+.++.++|+.|....
T Consensus 10 ~~LP~gWe~~~~-~~Gr~Yy~nh~t~~T~We~Pr~~~ 45 (50)
T 1i5h_W 10 GPLPPGWEERTH-TDGRVFFINHNIKKTQWEDPRMQN 45 (50)
T ss_dssp SSCSTTEEEEEC-TTSCEEEEETTTTEEESSCTTTSC
T ss_pred CCCCcCcEEEEc-CCCCEEEEECCCCCEEeeCCCCCc
Confidence 469999999988 889999999999999999998653
No 38
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=98.36 E-value=1.7e-07 Score=53.64 Aligned_cols=36 Identities=33% Similarity=0.772 Sum_probs=32.5
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
+.+||.+|+.+.+ ..|+.||+|+.++.++|+.|...
T Consensus 9 ~~~LP~gWe~~~~-~~G~~Yyinh~t~~TtWe~Pr~~ 44 (46)
T 2l4j_A 9 SGPLPEGWEQAIT-PEGEIYYINHKNKTTSWLDPRLE 44 (46)
T ss_dssp TSCCCTTCEEEEC-TTSCEEEEETTTTEEECSCCSSC
T ss_pred CCCCCcCceeEEC-CCCCEEEEECCCCCEeCCCCCcC
Confidence 4679999999998 89999999999999999998753
No 39
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=98.36 E-value=1.3e-07 Score=54.91 Aligned_cols=36 Identities=31% Similarity=0.759 Sum_probs=31.8
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
+.+||.+|+.+.+ ..++.||+|+.++.++|+.|...
T Consensus 10 ~~~LP~gWe~~~~-~~G~~Yy~nh~T~~ttWe~Pr~~ 45 (49)
T 2kpz_A 10 QGFLPKGWEVRHA-PNGRPFFIDHNTKTTTWEDPRLK 45 (49)
T ss_dssp --CCCTTEEEEEC-TTSCEEEEETTTTEEESSCTTCC
T ss_pred CCCCCCCcEEEEC-CCCCEEEEECCCCCEecCCCCCC
Confidence 5679999999998 78999999999999999999864
No 40
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=98.34 E-value=2.2e-07 Score=54.81 Aligned_cols=36 Identities=25% Similarity=0.744 Sum_probs=32.5
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
..+||.||+.+.+ ..|+.||+|+.++.++|+.|...
T Consensus 16 ~~~LP~GWe~~~~-~~Gr~Yyinh~tk~TtW~dPr~~ 51 (53)
T 2jmf_A 16 EGPLPPGWEIRYT-AAGERFFVDHNTRRTTFEDPRPG 51 (53)
T ss_dssp CSCCCTTEEEEEC-TTSCEEEEETTTCCEESSCCCSS
T ss_pred CCCCCcCcEEEEc-CCCCEEEEeCCCCcEecCCCCCC
Confidence 4679999999998 89999999999999999998753
No 41
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=98.34 E-value=1.7e-07 Score=51.52 Aligned_cols=34 Identities=41% Similarity=0.920 Sum_probs=29.8
Q ss_pred CCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 4 EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 4 ~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
.+||++|+++.+ ..+ .||+|+.++.+||+.|...
T Consensus 2 ~~LP~GWe~~~d-~~g-~YY~n~~t~~tqWe~P~~~ 35 (38)
T 2ho2_A 2 SDLPAGWMRVQD-TSG-TYYWHIPTGTTQWEPPGRA 35 (38)
T ss_dssp CCSCTTEEEEEC-SSC-EEEEETTTTEEESSCCCC-
T ss_pred CcCCCCceEEEe-CCC-CEEEecCCCCEeccCCCCC
Confidence 479999999999 477 9999999999999999764
No 42
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=98.31 E-value=4.4e-07 Score=53.68 Aligned_cols=38 Identities=21% Similarity=0.562 Sum_probs=33.8
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKPAE 41 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~~~ 41 (157)
..+||+||+.+.+ ..++.||+||.++.++|+.|.....
T Consensus 9 ~~~LP~GWe~~~~-~~G~~Yyinh~tk~TtwedPr~~~~ 46 (54)
T 1wmv_A 9 AGDLPYGWEQETD-ENGQVFFVDHINKRTTYLDPRLAFT 46 (54)
T ss_dssp SSCSCTTEEEEEC-TTSCEEEEESSSCCEESSCTTSSCC
T ss_pred CCCCCcCcEEEEC-CCCCEEEEeCCCCCEeecCCCCccc
Confidence 4579999999998 7899999999999999999987543
No 43
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.27 E-value=2.9e-07 Score=55.09 Aligned_cols=36 Identities=28% Similarity=0.590 Sum_probs=32.5
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
+.+||.+|+.+.+ ..++.||+||.++.++|+.|...
T Consensus 12 ~~~LP~GWe~~~~-~~Gr~Yyinh~tk~TtWe~Pr~~ 47 (57)
T 2ysd_A 12 LGPLPENWEMAYT-ENGEVYFIDHNTKTTSWLDPRCL 47 (57)
T ss_dssp CCSCCSSEEEEEC-SSCCEEEEETTTTEEESSCTTTC
T ss_pred CCCCCcCcEEEEC-CCCCEEEEECCCCcEecCCCCCc
Confidence 4579999999998 78999999999999999999864
No 44
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=98.25 E-value=3.4e-07 Score=49.85 Aligned_cols=34 Identities=38% Similarity=0.815 Sum_probs=30.9
Q ss_pred CCCCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 4 EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 4 ~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
.+||++|+...+ ..|+.||+|+.++.++|+.|..
T Consensus 2 ~~LP~gW~~~~~-~~G~~Yy~n~~t~~t~W~~P~~ 35 (37)
T 1e0m_A 2 MGLPPGWDEYKT-HNGKTYYYNHNTKTSTWTDPRM 35 (37)
T ss_dssp CCSCTTEEEEEC-SSCCEEEEETTTTEEESSCTTT
T ss_pred CCCCCCcEEEEC-CCCCEEEEECCCCCeeeeCcCC
Confidence 579999999888 7899999999999999999864
No 45
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.17 E-value=1.2e-07 Score=55.76 Aligned_cols=37 Identities=41% Similarity=0.780 Sum_probs=33.6
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
+..||.+|+++.+.+.++.||+|+.|+.++|+.|...
T Consensus 8 ~~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 8 EELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred cCCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 3459999999999889999999999999999999875
No 46
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=98.13 E-value=7.9e-07 Score=50.10 Aligned_cols=34 Identities=44% Similarity=0.976 Sum_probs=31.2
Q ss_pred CCCCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 4 EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 4 ~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
.+||.+|+.+.+ ..|+.||+|+.++.++|+.|..
T Consensus 7 ~~LP~gW~~~~~-~~Gr~YY~n~~T~~t~We~P~~ 40 (43)
T 1ymz_A 7 MPLPPGWERRTD-VEGKVYYFNVRTLTTTWERPTI 40 (43)
T ss_dssp CCCCSSEEEEEC-TTSCEEEEETTTTEEESSCCCS
T ss_pred CCCCCCCEEEEC-CCCCEEEEECCCCCCcccCCcc
Confidence 579999999988 6999999999999999999875
No 47
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=98.12 E-value=1.5e-06 Score=49.67 Aligned_cols=37 Identities=41% Similarity=0.829 Sum_probs=33.0
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
.+.+||.||+.+.+ ..++.||+|++++.++|..|...
T Consensus 5 ~~~~LP~GWe~~~~-~~gr~y~~n~~t~~t~W~dPr~~ 41 (46)
T 1jmq_A 5 DDVPLPAGWEMAKT-SSGQRYFKNHIDQTTTWQDPRKA 41 (46)
T ss_dssp SSCCCCTTBCCBCC-SSCCCBEEETTTTEEESSCTTTS
T ss_pred CCCCCCcCcEEEEc-CCCceEEEEecCCceeecCCCch
Confidence 35689999999988 89999999999999999998764
No 48
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.01 E-value=2.1e-06 Score=50.37 Aligned_cols=35 Identities=43% Similarity=0.938 Sum_probs=30.9
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
+.+||+||+...+ ..| .||.|+.++.+||+.|...
T Consensus 17 ~~~LPpGW~~~~D-~sG-tYY~h~~T~tTQWerP~~~ 51 (55)
T 2e45_A 17 DSDLPAGWMRVQD-TSG-TYYWHIPTGTTQWEPPGRA 51 (55)
T ss_dssp CSCCCTTEEEEEE-TTE-EEEEETTTCCEESSCCCCC
T ss_pred CCCCCCCCeEeec-CCC-CEEEEcCCCCCccCCCCCC
Confidence 5579999999999 478 9999999999999999754
No 49
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=97.92 E-value=3.8e-06 Score=56.42 Aligned_cols=37 Identities=24% Similarity=0.643 Sum_probs=33.0
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKPA 40 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~~ 40 (157)
+.+||+|||.+.+ ..|+.||+||.++.++|..|..+.
T Consensus 70 ~~pLP~GWE~r~d-~~Gr~YfIdH~tktTtW~dPRl~~ 106 (109)
T 3l4h_A 70 RLELPRGWEIKTD-QQGKSFFVDHNSRATTFIDPRIPL 106 (109)
T ss_dssp TSCCCTTEEEEEC-TTCCEEEEETTTTEEESSCSCCSC
T ss_pred CCCCCCCCeEEEC-CCCCEEEEeCCCCCEeeCCCCccc
Confidence 3579999999999 699999999999999999987654
No 50
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=97.81 E-value=5.8e-06 Score=53.87 Aligned_cols=37 Identities=35% Similarity=0.776 Sum_probs=33.2
Q ss_pred CCCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 2 GDEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 2 ~~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
+..+||.+|+.+.+ ..|+.||+|+.++.++|+.|...
T Consensus 6 ~~~~LP~gWe~~~~-~~Gr~YY~n~~t~~t~W~~P~~~ 42 (90)
T 2kxq_A 6 SPPDLPEGYEQRTT-QQGQVYFLHTQTGVSTWHDPRVP 42 (90)
T ss_dssp SCCSCCSSCEEEEE-TTTEEEEEETTTTEEESSCSSSC
T ss_pred CCCCCCCCcEEEEC-CCCCEEEEECCCCeEeeeccccc
Confidence 45679999999998 79999999999999999999864
No 51
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=97.74 E-value=9.2e-06 Score=52.69 Aligned_cols=36 Identities=33% Similarity=0.797 Sum_probs=32.5
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
..+||.+|+.+.+ ..|+.||+|+.++.++|+.|...
T Consensus 10 ~~~LP~gWe~~~~-~~Gr~Yy~n~~t~~t~W~~P~~~ 45 (88)
T 1tk7_A 10 LGPLPDGWEKKIQ-SDNRVYFVNHKNRTTQWEDPRTQ 45 (88)
T ss_dssp TSSSSSSCCEEEE-TTTEEEEEETTTTEEEEESCCCT
T ss_pred cCCCCCCcEEEEC-CCCCEEEEECCCCCeEeeccccc
Confidence 3569999999998 88999999999999999999864
No 52
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=97.62 E-value=2.3e-05 Score=51.01 Aligned_cols=35 Identities=29% Similarity=0.708 Sum_probs=31.9
Q ss_pred CCCCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 4 EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 4 ~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
.+||.+|+.+.+ ..|+.||+|+.++.++|+.|..+
T Consensus 54 ~~LP~gWe~~~~-~~G~~Yy~n~~t~~t~w~~Pr~~ 88 (90)
T 2kxq_A 54 GPLPPGWEIRNT-ATGRVYFVDHNNRTTQFTDPRLS 88 (90)
T ss_dssp CCCCSSCCEEEC-TTSCEEEEETTTTEEESSCTTTS
T ss_pred cccCCCceEEEC-CCCCEEEEECCCCcEecCCCCcC
Confidence 479999999998 78999999999999999998764
No 53
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=97.44 E-value=3.8e-05 Score=49.71 Aligned_cols=33 Identities=27% Similarity=0.806 Sum_probs=30.1
Q ss_pred CCCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 4 EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 4 ~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
.+||.+|+.+.+ ..|+.||+|+.++.++|+.|.
T Consensus 55 ~~LP~gWe~~~~-~~G~~Yy~nh~t~~ttw~~Pr 87 (88)
T 1tk7_A 55 GPLPPGWEIRYT-AAGERFFVDHNTRRTTFEDPR 87 (88)
T ss_dssp CSSCSSCEEEEE-TTTEEEEEETTTTEEESSSSC
T ss_pred cccCCceEEEEC-CCCCEEEEECCCCcEeCCCCC
Confidence 579999999988 789999999999999998874
No 54
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=97.31 E-value=4.7e-05 Score=58.81 Aligned_cols=33 Identities=30% Similarity=0.705 Sum_probs=31.3
Q ss_pred CCCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 4 EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 4 ~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
.+||++||.+.+ ..|+-||+||.|+.++|+.|.
T Consensus 10 ~~l~~~we~~~~-~~~~~y~~~h~~~tt~w~~p~ 42 (261)
T 1eg3_A 10 TSVQGPWERAIS-PNKVPYYINHETQTTCWDHPK 42 (261)
T ss_dssp TTCCTTEEEEEC-TTSCEEEEETTTTEEESSCHH
T ss_pred CCCCCCcceeEC-CCCCeEeecCCcccccCCCCc
Confidence 589999999998 799999999999999999998
No 55
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.0001 Score=60.68 Aligned_cols=36 Identities=36% Similarity=0.906 Sum_probs=33.2
Q ss_pred CCCCcchhhhcccCCCceeeEeeecccccccCCCCCC
Q psy2677 4 EELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKPA 40 (157)
Q Consensus 4 ~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~~ 40 (157)
++||+|||.+.+ ..|+.||+||.++.++|..|..+.
T Consensus 7 ~~lP~gWe~~~~-~~g~~y~i~h~~~~t~w~~Pr~~~ 42 (429)
T 3olm_A 7 GPLPSGWEMRLT-NTARVYFVDHNTKTTTWDDPRLPS 42 (429)
T ss_dssp CCCCTTCCCCCS-SCCCCCEEETTTTEEESSCTTSCC
T ss_pred CCCCCCceeEEC-CCCCeEEEeCCCcceeccCCCCCc
Confidence 689999999998 899999999999999999998654
No 56
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=97.22 E-value=0.00017 Score=39.76 Aligned_cols=35 Identities=29% Similarity=0.616 Sum_probs=30.8
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
.-++|..|.+..+ ..++.||.|..|+.++|++|..
T Consensus 5 ~~~~~~~W~e~~~-~~G~~YYyN~~T~eS~We~P~~ 39 (40)
T 2ysi_A 5 SSGTEEIWVENKT-PDGKVYYYNARTRESAWTKPDG 39 (40)
T ss_dssp CCCCCCSEEEEEC-TTSCEEEEETTTCCEESSCCSC
T ss_pred cCCCCCCCEEEEC-CCCCEEEEECCCCCEEeCCCCC
Confidence 4578999998876 8999999999999999999864
No 57
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=97.06 E-value=0.00017 Score=36.35 Aligned_cols=27 Identities=30% Similarity=0.569 Sum_probs=24.1
Q ss_pred cchhhhcccCCCceeeEeeecccccccCC
Q psy2677 8 AGWEKRMSRSSGHHYYLNIYTKESQWDRP 36 (157)
Q Consensus 8 ~~w~~~~~~~~~~~y~~n~~~~~~~~~~~ 36 (157)
++|+ .+.+.++.||.|..|+.++|++|
T Consensus 1 ~gWe--~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE--IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE--EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe--EECCCCCeEEEECCCCCEeccCC
Confidence 4799 67789999999999999999876
No 58
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=97.04 E-value=0.00014 Score=40.30 Aligned_cols=34 Identities=32% Similarity=0.684 Sum_probs=26.1
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
.+++|.+|....+ ..++.||.|..|+.++|++|.
T Consensus 7 ~~~~~~~W~e~~~-~~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 7 VGSAKSMWTEHKS-PDGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp -----CCEEEEEE-TTTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCCcEEEEC-CCCCEEEEECCCCCEEeCCCC
Confidence 4568999998887 689999999999999999985
No 59
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=96.84 E-value=0.00035 Score=45.52 Aligned_cols=35 Identities=31% Similarity=0.694 Sum_probs=31.4
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
+.+||.+|+.+.+ ..|+.||.|+.|+.++|+.|..
T Consensus 9 ~~~lp~~W~e~~~-~~Gr~YYyN~~T~~s~We~P~~ 43 (92)
T 2l5f_A 9 ASGAKSMWTEHKS-PDGRTYYYNTETKQSTWEKPDD 43 (92)
T ss_dssp TTBTTTTEEEEEC-TTSCEEEEETTTTEEESSCSGG
T ss_pred CCCCCCCcEEEEc-CCCCEEEEECCCCceecccCcc
Confidence 4569999999998 5999999999999999999875
No 60
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=96.63 E-value=0.00036 Score=43.58 Aligned_cols=33 Identities=30% Similarity=0.672 Sum_probs=29.5
Q ss_pred CCcchhhhcccCCCceeeEeeecccccccCCCCC
Q psy2677 6 LPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTKP 39 (157)
Q Consensus 6 ~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~~ 39 (157)
||.+|+...+ ..|+.||+|+.++.++|+.|..+
T Consensus 41 lp~gW~~~~~-~~Gr~Yy~n~~t~~t~W~~P~~~ 73 (75)
T 1o6w_A 41 RENGWKAAKT-ADGKVYYYNPTTRETSWTIPAFE 73 (75)
T ss_dssp HHHTCEEEEC-TTCCEEEEETTTTEEESSCCCCC
T ss_pred CCCeEEEEEC-CCCCEEEEECCCCCEECCCCCCC
Confidence 6889999888 68999999999999999998763
No 61
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=96.26 E-value=0.0017 Score=34.98 Aligned_cols=32 Identities=31% Similarity=0.717 Sum_probs=27.9
Q ss_pred CCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 6 LPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 6 ~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
....|....+ ..|+.||.|..|+.++|++|..
T Consensus 4 ~~~~W~e~~~-~~G~~YYyN~~T~es~We~P~~ 35 (37)
T 1e0l_A 4 AVSEWTEYKT-ADGKTYYYNNRTLESTWEKPQE 35 (37)
T ss_dssp SSCSCEEEEC-TTSCEEEEETTTTEEESSCCSS
T ss_pred CCCCeEEEEC-CCCCEEEEECCCCCEEecCCCc
Confidence 4678999888 5599999999999999999864
No 62
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=95.37 E-value=0.0056 Score=38.09 Aligned_cols=32 Identities=34% Similarity=0.780 Sum_probs=28.8
Q ss_pred CCCcchhhhcccCCCceeeEeeecccccccCCC
Q psy2677 5 ELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPT 37 (157)
Q Consensus 5 ~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~ 37 (157)
++|.+|+...+ ..|+.||.|+.|+.++|+.|.
T Consensus 43 ~~~~~W~~~~~-~~Gr~YyyN~~T~~s~We~P~ 74 (75)
T 2jxw_A 43 AVKTVWVEGLS-EDGFTYYYNTETGESRWEKPD 74 (75)
T ss_dssp SCCCSEEEEEE-TTTEEEEEETTTTEEESSCCC
T ss_pred CCCccEEEEEC-CCCCEEEEECcCCCEeccCcC
Confidence 57899999988 589999999999999999875
No 63
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=95.20 E-value=0.0042 Score=40.25 Aligned_cols=32 Identities=41% Similarity=0.789 Sum_probs=28.5
Q ss_pred CCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 6 LPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 6 ~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
+|.+|+.+.+ ..|+.||+|+.|+.++|+.|..
T Consensus 53 ~~~~W~~~~~-~~Gr~Yy~N~~T~~s~We~P~~ 84 (92)
T 2l5f_A 53 SKCPWKEYKS-DSGKTYYYNSQTKESRWAKPKE 84 (92)
T ss_dssp HSCSEEEEEC-TTCCEEEEETTTTEEESCCCHH
T ss_pred cccceEEEEC-CCCCEEEEECCCCCeeccCchh
Confidence 5789999887 6899999999999999998864
No 64
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=94.79 E-value=0.0082 Score=37.19 Aligned_cols=30 Identities=37% Similarity=0.849 Sum_probs=26.5
Q ss_pred cchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 8 AGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 8 ~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
++|+.+.+ ..|+.||+|+.++.++|+.|..
T Consensus 2 ~~W~~~~~-~~Gr~YY~n~~T~~s~W~~P~~ 31 (75)
T 1o6w_A 2 SIWKEAKD-ASGRIYYYNTLTKKSTWEKPKE 31 (75)
T ss_dssp CCEEEEEC-TTCCEEEEETTTTEEESSCCHH
T ss_pred CCCeEEEC-CCCCeEEEECCCCCEEeecchh
Confidence 47998888 6999999999999999999863
No 65
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=93.08 E-value=0.027 Score=34.87 Aligned_cols=31 Identities=32% Similarity=0.853 Sum_probs=27.4
Q ss_pred CcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 7 PAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 7 p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
-.+|+...+ ..|+.||.|+.|+.++|+.|..
T Consensus 4 ~~~W~e~~~-~~G~~YYyN~~T~~s~We~P~~ 34 (75)
T 2jxw_A 4 KGRWVEGIT-SEGYHYYYDLISGASQWEKPEG 34 (75)
T ss_dssp CCCEEEEEE-TTTEEEEEETTTTEEECSCCSS
T ss_pred CCCcEEEEC-CCCCEEEEECCCCCEeecCCCc
Confidence 358998888 5699999999999999999975
No 66
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=92.65 E-value=0.046 Score=31.31 Aligned_cols=29 Identities=34% Similarity=0.913 Sum_probs=25.8
Q ss_pred chhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 9 GWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 9 ~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
.|.+..+ ..++.||.|..|+..+|++|..
T Consensus 8 ~W~e~~s-~~G~~YYyN~~T~eS~WekP~~ 36 (50)
T 2dk1_A 8 RWVEGIT-SEGYHYYYDLISGASQWEKPEG 36 (50)
T ss_dssp CEEECCC-STTCCCEEESSSCCEESSCCTT
T ss_pred CeEEEEC-CCCCEEEEECCCCCEEeeCChh
Confidence 5988888 5799999999999999999975
No 67
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.39 E-value=0.37 Score=29.67 Aligned_cols=29 Identities=28% Similarity=0.574 Sum_probs=25.4
Q ss_pred chhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 9 GWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 9 ~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
-|-...+ ..|+.||.|..|+.+.|+.|.+
T Consensus 21 ~W~~v~T-~dGR~fyyN~~Tk~S~WekP~e 49 (73)
T 2dk7_A 21 PWCVVWT-GDERVFFYNPTTRLSMWDRPDD 49 (73)
T ss_dssp SCEEEEE-SSSCEEEEETTTTEECSSCCTT
T ss_pred CcEEEEC-CCCCEEEecCcccceeccCChH
Confidence 4766666 8999999999999999999887
No 68
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=78.03 E-value=1.1 Score=27.55 Aligned_cols=35 Identities=34% Similarity=0.656 Sum_probs=27.0
Q ss_pred CCCCCcchhhhcccCCCceeeEeeecccccccCCCC
Q psy2677 3 DEELPAGWEKRMSRSSGHHYYLNIYTKESQWDRPTK 38 (157)
Q Consensus 3 ~~~~p~~w~~~~~~~~~~~y~~n~~~~~~~~~~~~~ 38 (157)
.++||+||..-.- .+|--.|++..+++-.|-.|+-
T Consensus 26 ~~~LPeGW~~v~H-~SGmP~YlH~~trV~T~SrPY~ 60 (79)
T 3le4_A 26 TEPLPDGWIMTFH-NSGVPVYLHRESRVVTWSRPYF 60 (79)
T ss_dssp CCCCCTTEEEEEC-TTSSEEEEETTTTEEESSCCCC
T ss_pred CCcCCCccEEEEe-cCCceEEEeccceEEeccCCeE
Confidence 4679999975554 5777778899998888887764
No 69
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=43.66 E-value=29 Score=22.40 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCC
Q psy2677 75 SKEEAIELVKSYREQINTGKASFGELASKFSDC 107 (157)
Q Consensus 75 ~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~ 107 (157)
+=++|.+.|++|.++|.+|..+.++..+.|-..
T Consensus 31 sFEeal~eLEeIV~~LE~gel~LEesl~lyeeG 63 (100)
T 1vp7_A 31 DFETALAELESLVSAMENGTLPLEQSLSAYRRG 63 (100)
T ss_dssp SHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 468899999999999999988888888888754
No 70
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=38.83 E-value=21 Score=23.28 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCc
Q psy2677 74 RSKEEAIELVKSYREQINTGKASFGELASKFSDCS 108 (157)
Q Consensus 74 ~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~ 108 (157)
..+++..++.+.+.+.+..| |++.+..-|+++.
T Consensus 10 ~~~~~I~~l~~~~~~A~~~~--D~~~~~~l~a~d~ 42 (143)
T 2ux0_A 10 VRKQEIIKITEQLIEAINNG--DFEAYTKICDPGL 42 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--CHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcC--CHHHHHHhcCCCc
Confidence 34556777778888888887 9999999999763
No 71
>1d9n_A Methyl-CPG-binding protein MBD1; PCM1, methylation, DNA binding domain, gene regulation; NMR {Homo sapiens} SCOP: d.10.1.3 PDB: 1ig4_A*
Probab=34.45 E-value=18 Score=22.02 Aligned_cols=11 Identities=36% Similarity=0.897 Sum_probs=8.0
Q ss_pred CCCCcchhhhc
Q psy2677 4 EELPAGWEKRM 14 (157)
Q Consensus 4 ~~~p~~w~~~~ 14 (157)
-.||+||.+..
T Consensus 9 p~LP~GW~Re~ 19 (75)
T 1d9n_A 9 PALGPGWKRRE 19 (75)
T ss_dssp TTTCSSCEEEE
T ss_pred CCCCCCCEEEE
Confidence 45999996544
No 72
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=34.09 E-value=30 Score=22.51 Aligned_cols=33 Identities=9% Similarity=0.259 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCch
Q psy2677 75 SKEEAIELVKSYREQINTGKASFGELASKFSDCSS 109 (157)
Q Consensus 75 ~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~ 109 (157)
++++.++.++...+.+..| |++.++.-|+++..
T Consensus 6 ~~~~I~~l~~~~~~A~~~~--D~~~~~~l~a~D~v 38 (142)
T 3f7s_A 6 AESEIRQLIERWMQAVRDR--DIPGIIAPYADDIV 38 (142)
T ss_dssp HHHHHHHHHHHHHHHHHTT--CHHHHHTTEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHcC--CHHHHHhhcCCCEE
Confidence 4567788888888888887 99999999997643
No 73
>1u14_A Hypothetical UPF0244 protein YJJX; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; 1.68A {Salmonella typhimurium} SCOP: c.51.4.3 PDB: 1u5w_A
Probab=33.93 E-value=18 Score=25.67 Aligned_cols=41 Identities=17% Similarity=0.519 Sum_probs=33.1
Q ss_pred HHHHHHhcChhhHHHHHHhhCC-CchhhcCCCcccccCCCCcH
Q psy2677 85 SYREQINTGKASFGELASKFSD-CSSAKRSGDLGPFGRGTMQK 126 (157)
Q Consensus 85 ~i~~~l~~g~~~F~~lA~~yS~-~~~~~~gG~lg~~~~~~l~~ 126 (157)
.+.+.|++| ....++..+|.. ...+.++|-+|.++.+.+..
T Consensus 110 ~v~~~i~~G-~ELG~vmd~~~~~~~i~~~~GaIG~lT~g~~~R 151 (172)
T 1u14_A 110 VILDRVRQG-EALGPVMSQYTGIDEIGRKEGAIGVFTAGKLTR 151 (172)
T ss_dssp HHHHHHTTT-CCHHHHHHHHHCCTTGGGTTHHHHHHTTTSSCH
T ss_pred HHHHHHHcC-CCHHHHHHHHhCCCccCccCchHhhhcCCceeH
Confidence 344577888 699999999875 67889999999999988753
No 74
>1zwy_A Hypothetical UPF0244 protein VC0702; hypothetical protein, structural genomics, PSI, protein STRU initiative; 1.90A {Vibrio cholerae} SCOP: c.51.4.3 PDB: 1zno_A
Probab=27.87 E-value=20 Score=25.73 Aligned_cols=41 Identities=12% Similarity=0.308 Sum_probs=27.5
Q ss_pred HHHHHHhcChhhHHHHHHhhCC-CchhhcCCCcccccCCCCcH
Q psy2677 85 SYREQINTGKASFGELASKFSD-CSSAKRSGDLGPFGRGTMQK 126 (157)
Q Consensus 85 ~i~~~l~~g~~~F~~lA~~yS~-~~~~~~gG~lg~~~~~~l~~ 126 (157)
.+.+.|++| ....++..++.. ...+.++|-+|.++.+.+..
T Consensus 120 ~v~~~i~~G-~ELG~vmd~~~g~~ni~~~~GaIG~lT~g~~tR 161 (185)
T 1zwy_A 120 LVLERLRQA-KELGDVMDEVFGTENIKQKGGAIGLLTRHHLTR 161 (185)
T ss_dssp HHHHHHTTC--CHHHHHHHHHC-------CHHHHHHTTTSSCH
T ss_pred HHHHHHHcC-CCHHHHHHHHhCCCcccccCchhhhhcCCceeH
Confidence 444577888 799999999875 57888999999999987753
No 75
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=25.19 E-value=57 Score=21.85 Aligned_cols=33 Identities=9% Similarity=0.241 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCch
Q psy2677 75 SKEEAIELVKSYREQINTGKASFGELASKFSDCSS 109 (157)
Q Consensus 75 ~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~ 109 (157)
.+++..++.+++.+.+..| ||+.+.+-|.++-+
T Consensus 10 ~~~eI~~~~~~~~~Ai~~g--D~~~~~~l~~~dv~ 42 (143)
T 2f86_B 10 QKQDIVRVTQTLLDAISCK--DFETYTRLCDTSMT 42 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHT--CHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcc--CHHHHHHhcCCCEE
Confidence 4456677778888898887 89999998887644
No 76
>3c2i_A Methyl-CPG-binding protein 2; water mediated recognition; HET: DNA 5CM; 2.50A {Homo sapiens} PDB: 1qk9_A
Probab=24.59 E-value=24 Score=22.64 Aligned_cols=13 Identities=38% Similarity=1.145 Sum_probs=8.9
Q ss_pred CCCCCcchhhhcc
Q psy2677 3 DEELPAGWEKRMS 15 (157)
Q Consensus 3 ~~~~p~~w~~~~~ 15 (157)
+..||.||.+..-
T Consensus 21 ~~~lP~GW~re~~ 33 (97)
T 3c2i_A 21 DPTLPEGWTRKLK 33 (97)
T ss_dssp CTTSCTTCEEEEE
T ss_pred CCCCCCCCEEEEE
Confidence 4569999965443
No 77
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=23.69 E-value=63 Score=20.27 Aligned_cols=33 Identities=9% Similarity=0.109 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCch
Q psy2677 75 SKEEAIELVKSYREQINTGKASFGELASKFSDCSS 109 (157)
Q Consensus 75 ~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~~ 109 (157)
+..+.++.+......+..| |++.++.-|+++..
T Consensus 9 d~~~i~~~~~~~~~a~~~~--D~~~~~~l~a~D~v 41 (135)
T 3d9r_A 9 ELAVIEAAAIAYLTAFNRA--DIPAVIATYTDDGV 41 (135)
T ss_dssp HHHHHHHHHHHHHHHHHTT--CHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcC--CHHHHHHhcCCCEE
Confidence 3456677777788888876 89999999997643
No 78
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=23.36 E-value=1.5e+02 Score=19.04 Aligned_cols=29 Identities=17% Similarity=0.203 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHhcChhhHHHHHHhhCC
Q psy2677 76 KEEAIELVKSYREQINTGKASFGELASKFSD 106 (157)
Q Consensus 76 ~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~ 106 (157)
++..++.+.++...+.+| +|+.+....++
T Consensus 13 e~~v~~~A~~~I~~l~~~--dy~~i~~~~~~ 41 (114)
T 4hyz_A 13 KETVRKQAMEDIEIAQSK--DYESWKSRFTK 41 (114)
T ss_dssp HHHHHHHHHHHHHHHHTT--CHHHHHTTBCH
T ss_pred HHHHHHHHHHHHHHHHhC--CHHHHHHHhCH
Confidence 456667777888888887 89999855554
No 79
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=23.34 E-value=55 Score=20.60 Aligned_cols=31 Identities=13% Similarity=0.240 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCc
Q psy2677 76 KEEAIELVKSYREQINTGKASFGELASKFSDCS 108 (157)
Q Consensus 76 ~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~ 108 (157)
.+++++.++...+.++++ |.+.++.-|+++.
T Consensus 7 ~~~~~~~~~~~~~a~n~~--D~~~l~~l~a~D~ 37 (122)
T 3h3h_A 7 QAFAQQFSREWIDAWNAH--DLDAILSHYADGF 37 (122)
T ss_dssp HHHHHHHHHHHHHHHHTT--CHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcc--CHHHHHHhcCCCE
Confidence 456777888888888876 8999999999763
No 80
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=23.02 E-value=1.4e+02 Score=18.93 Aligned_cols=32 Identities=9% Similarity=0.102 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCc
Q psy2677 75 SKEEAIELVKSYREQINTGKASFGELASKFSDCS 108 (157)
Q Consensus 75 ~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~ 108 (157)
...++.+.+......+..| |++.+..-|.+++
T Consensus 12 ~~~ei~~~~~~y~~A~~~~--D~~~l~~lf~~d~ 43 (129)
T 2rcd_A 12 VLADVTAAFYRYEKALTGN--DVAVLDELFWHDE 43 (129)
T ss_dssp HHHHHHHHHHHHHHHHHTT--CHHHHHHHBCCST
T ss_pred HHHHHHHHHHHHHHHHhcC--CHHHHHHhccCCC
Confidence 4556666666666788876 8999999999764
No 81
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=21.03 E-value=64 Score=20.04 Aligned_cols=22 Identities=14% Similarity=0.395 Sum_probs=18.8
Q ss_pred CCCCcHHHHHHHhcCCCCCccc
Q psy2677 121 RGTMQKPFEDAAFSLKVGEMSE 142 (157)
Q Consensus 121 ~~~l~~~~~~av~~l~~Geis~ 142 (157)
.+.+.+.|++++..|++|+...
T Consensus 52 ~~~~i~g~~~~l~gm~~Ge~~~ 73 (107)
T 2ppn_A 52 KQEVIRGWEEGVAQMSVGQRAK 73 (107)
T ss_dssp SCCSCHHHHHHHTTCCTTCEEE
T ss_pred CCChHHHHHHHHhCCCCCCEEE
Confidence 3578899999999999998764
No 82
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=20.98 E-value=78 Score=21.12 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=23.9
Q ss_pred cHHHHHHHhcCCCCCccccEEeCCe----EEEEEE
Q psy2677 125 QKPFEDAAFSLKVGEMSEPVLTESG----VHIILR 155 (157)
Q Consensus 125 ~~~~~~av~~l~~Geis~pi~t~~G----~hIi~v 155 (157)
..++.+++...++|+.. -+.++.| |.|+.|
T Consensus 91 ~SPlG~ALlGk~~GD~v-~v~~p~G~~~~~~I~~I 124 (136)
T 3bmb_A 91 MAPVGAALLGLRVGDSI-HWELPGGVATHLEVLEL 124 (136)
T ss_dssp TSHHHHHHTTCBTTCEE-EEEETTTEEEEEEEEEE
T ss_pred CCHHHHHHcCCCCCCEE-EEEcCCCCEEEEEEEEE
Confidence 35799999999999986 4788888 666655
No 83
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=20.57 E-value=67 Score=20.26 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=19.0
Q ss_pred CCCCcHHHHHHHhcCCCCCccc
Q psy2677 121 RGTMQKPFEDAAFSLKVGEMSE 142 (157)
Q Consensus 121 ~~~l~~~~~~av~~l~~Geis~ 142 (157)
.+.+.+.|+++|..|++|+...
T Consensus 58 ~~~~i~g~e~~l~gm~~Ge~~~ 79 (113)
T 1yat_A 58 VGQVIKGWDVGIPKLSVGEKAR 79 (113)
T ss_dssp SSSSCHHHHHHGGGCCTTCEEE
T ss_pred CCCccHHHHHHHhCCCCCCEEE
Confidence 4578899999999999999764
No 84
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=20.42 E-value=1.2e+02 Score=21.04 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHHHHhcChhhHHHHHHhhCCCc
Q psy2677 75 SKEEAIELVKSYREQINTGKASFGELASKFSDCS 108 (157)
Q Consensus 75 ~~~~A~~~~~~i~~~l~~g~~~F~~lA~~yS~~~ 108 (157)
++++..+.....++.+..| ||+.++.-|+++.
T Consensus 10 d~~~I~~~~~~~~~A~~~g--D~~~l~alwa~d~ 41 (170)
T 3cnx_A 10 DVEQVGLANTAFYEAMERG--DFETLSSLWLTPA 41 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTT--CHHHHHHHBCCHH
T ss_pred hHHHHHHHHHHHHHHHHcC--CHHHHHHhhcCCc
Confidence 3456667777888888887 9999999999764
No 85
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=20.03 E-value=84 Score=14.67 Aligned_cols=17 Identities=24% Similarity=0.546 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHhcC
Q psy2677 77 EEAIELVKSYREQINTG 93 (157)
Q Consensus 77 ~~A~~~~~~i~~~l~~g 93 (157)
+.-++++..+++.+++|
T Consensus 11 edlqerlrklrkklrsg 27 (27)
T 3twe_A 11 EDLQERLRKLRKKLRSG 27 (27)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 34455555566665543
Done!