Query psy2679
Match_columns 526
No_of_seqs 190 out of 220
Neff 3.1
Searched_HMMs 29240
Date Fri Aug 16 22:24:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2679.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2679hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vzc_A Alpha-parvin; membrane, 100.0 3.3E-29 1.1E-33 221.5 8.3 108 328-435 1-119 (131)
2 1pxy_A Fimbrin-like protein; c 99.9 2.4E-24 8.1E-29 223.0 18.6 302 86-435 2-372 (506)
3 1rt8_A Fimbrin; filamentous ac 99.9 1.2E-22 4.1E-27 211.0 18.1 301 90-435 11-385 (513)
4 3hoc_A Filamin-A; calponin hom 99.9 7.6E-23 2.6E-27 199.8 13.0 231 61-432 16-260 (272)
5 1aoa_A T-fimbrin; actin-bindin 99.8 1.4E-20 5E-25 181.3 16.1 217 90-434 23-268 (275)
6 2wa7_A Filamin-B; disease muta 99.8 1.8E-19 6.3E-24 171.6 13.8 209 84-433 12-234 (245)
7 1dxx_A Dystrophin; structural 99.8 2.7E-19 9.1E-24 170.3 14.5 211 81-433 6-229 (246)
8 1sh5_A Plectin 1, PLTN, PCN; a 99.8 9.5E-19 3.3E-23 165.9 14.5 206 86-434 7-227 (245)
9 3f7p_A Plectin-1; plakin, hemi 99.8 4.7E-18 1.6E-22 168.1 15.1 207 83-433 65-282 (296)
10 4b7l_A Filamin-B; structural p 99.7 6.6E-18 2.2E-22 169.1 13.9 204 85-428 10-224 (347)
11 1sjj_A Actinin; 3-helix bundle 99.7 2.9E-18 1E-22 183.4 9.8 189 93-427 10-206 (863)
12 3hoc_A Filamin-A; calponin hom 99.7 8.5E-18 2.9E-22 164.3 8.3 96 340-435 38-143 (272)
13 1wku_A Alpha-actinin 3; calpon 99.7 6.7E-17 2.3E-21 155.1 13.6 200 90-435 26-236 (254)
14 2yrn_A Neuron navigator 2 isof 99.7 1.3E-17 4.6E-22 145.6 6.4 98 338-435 7-115 (129)
15 1pxy_A Fimbrin-like protein; c 99.7 2.2E-16 7.6E-21 163.6 16.2 209 85-435 270-495 (506)
16 4b7l_A Filamin-B; structural p 99.7 4.6E-17 1.6E-21 163.0 8.3 93 343-435 11-113 (347)
17 1rt8_A Fimbrin; filamentous ac 99.6 3.3E-15 1.1E-19 155.4 14.9 198 92-433 286-504 (513)
18 2yrn_A Neuron navigator 2 isof 99.6 4.1E-15 1.4E-19 129.9 8.6 109 85-231 12-125 (129)
19 3f7p_A Plectin-1; plakin, hemi 99.6 2.8E-15 9.7E-20 148.3 8.5 99 337-435 61-166 (296)
20 2wa7_A Filamin-B; disease muta 99.6 4.8E-15 1.6E-19 141.2 8.4 93 343-435 14-116 (245)
21 1wku_A Alpha-actinin 3; calpon 99.5 1.2E-14 4.2E-19 139.5 6.4 96 337-435 17-121 (254)
22 1sh5_A Plectin 1, PLTN, PCN; a 99.5 2.9E-14 9.9E-19 135.2 8.4 93 343-435 6-110 (245)
23 1dxx_A Dystrophin; structural 99.4 9.3E-14 3.2E-18 132.3 7.8 93 343-435 10-110 (246)
24 1sjj_A Actinin; 3-helix bundle 99.3 1.5E-12 5.2E-17 139.5 8.2 92 343-435 2-102 (863)
25 1aoa_A T-fimbrin; actin-bindin 99.3 1.3E-12 4.3E-17 126.1 6.9 87 349-435 24-130 (275)
26 2vzc_A Alpha-parvin; membrane, 99.0 1.3E-09 4.6E-14 96.3 9.8 105 91-231 22-129 (131)
27 1wjo_A T-plastin; CH domain, a 98.7 1.2E-08 4.1E-13 90.7 4.5 84 351-435 9-106 (124)
28 3b2e_E Golgi to ER traffic pro 98.0 5.3E-09 1.8E-13 88.2 0.0 59 406-464 26-84 (84)
29 3vlc_E Golgi to ER traffic pro 98.5 8.1E-09 2.8E-13 88.7 -0.2 64 401-464 31-94 (94)
30 3sjb_C Golgi to ER traffic pro 98.5 2.9E-08 1E-12 85.1 2.0 59 405-463 28-86 (93)
31 1wyl_A NEDD9 interacting prote 98.1 2.9E-06 1E-10 73.5 4.7 82 350-432 8-98 (116)
32 2d87_A Smoothelin splice isofo 98.0 4.1E-06 1.4E-10 74.0 4.9 83 350-433 8-101 (128)
33 2d89_A EHBP1 protein; all alph 98.0 2.9E-06 1E-10 73.8 3.6 81 351-432 11-101 (119)
34 3sja_C Golgi to ER traffic pro 98.0 2.5E-06 8.6E-11 69.1 2.6 46 407-452 13-58 (65)
35 2d88_A Protein mical-3; all al 97.8 7.4E-06 2.5E-10 71.6 3.0 81 351-432 11-102 (121)
36 1bkr_A Spectrin beta chain; fi 97.8 1.4E-05 4.8E-10 68.6 4.5 78 350-428 4-89 (109)
37 1bhd_A Utrophin; calponin homo 97.7 2E-05 6.9E-10 68.5 3.8 83 349-432 8-100 (118)
38 1wyq_A Spectrin beta chain, br 97.6 3.1E-05 1E-09 68.3 4.1 77 351-428 9-93 (127)
39 1wyp_A Calponin 1; CH domain, 97.6 0.00037 1.3E-08 62.0 10.0 102 91-229 17-119 (136)
40 1wyn_A Calponin-2; CH domain, 97.6 0.00029 9.8E-09 63.4 9.4 102 91-229 17-119 (146)
41 1h67_A Calponin alpha; cytoske 97.5 0.00031 1.1E-08 60.0 8.2 98 94-228 6-104 (108)
42 1wjo_A T-plastin; CH domain, a 97.4 0.00055 1.9E-08 60.9 9.3 96 94-194 10-111 (124)
43 1ujo_A Transgelin; CH domain, 97.4 0.0011 3.9E-08 59.3 10.7 103 91-229 9-121 (144)
44 1wym_A Transgelin-2; CH domain 97.3 0.0012 4E-08 59.9 10.1 105 91-230 17-129 (155)
45 1p5s_A RAS GTPase-activating-l 96.6 0.0093 3.2E-07 56.5 9.7 103 91-230 55-161 (203)
46 1wyl_A NEDD9 interacting prote 96.6 0.01 3.6E-07 51.3 9.2 101 93-231 9-111 (116)
47 2d88_A Protein mical-3; all al 96.4 0.013 4.6E-07 51.0 9.1 100 95-232 13-116 (121)
48 3i6x_A P195, RAS GTPase-activa 96.4 0.016 5.5E-07 54.5 10.1 106 89-229 45-161 (193)
49 2rr8_A Iqgap1 protein; F-actin 96.4 0.0061 2.1E-07 57.0 7.0 100 94-229 28-139 (190)
50 1p2x_A RNG2 protein, RAS GTPas 96.3 0.023 7.8E-07 51.7 10.3 102 92-230 12-117 (159)
51 2d87_A Smoothelin splice isofo 96.3 0.02 6.7E-07 50.5 9.3 96 93-194 9-108 (128)
52 1wyr_A RHO guanine nucleotide 96.2 0.018 6.1E-07 50.3 8.4 100 92-230 7-115 (121)
53 2l3g_A RHO guanine nucleotide 96.1 0.034 1.1E-06 49.1 9.7 99 91-228 12-120 (126)
54 2d89_A EHBP1 protein; all alph 96.0 0.028 9.5E-07 48.8 8.9 100 93-231 11-114 (119)
55 1bhd_A Utrophin; calponin homo 96.0 0.02 6.7E-07 49.7 7.9 73 93-167 10-83 (118)
56 1bkr_A Spectrin beta chain; fi 95.9 0.039 1.3E-06 47.2 9.4 74 93-168 5-79 (109)
57 1wyq_A Spectrin beta chain, br 95.3 0.054 1.9E-06 47.6 8.2 73 94-168 10-83 (127)
58 2ee7_A Sperm flagellar protein 93.0 0.093 3.2E-06 46.8 4.6 93 349-444 15-120 (127)
59 1wix_A HOOK homolog 1, RSGI RU 92.7 0.59 2E-05 42.8 9.5 72 90-164 8-86 (164)
60 2qjz_A Microtubule-associated 92.0 0.22 7.7E-06 44.1 5.8 73 351-428 7-90 (123)
61 2qjz_A Microtubule-associated 91.5 0.6 2.1E-05 41.4 7.9 69 94-167 8-79 (123)
62 3ky9_A Proto-oncogene VAV; cal 91.0 0.62 2.1E-05 49.0 8.8 105 90-227 4-120 (587)
63 1wyo_A Protein EB3, microtubul 90.7 0.69 2.4E-05 42.8 7.8 69 94-167 25-96 (159)
64 1wyo_A Protein EB3, microtubul 89.7 0.44 1.5E-05 44.2 5.6 73 350-427 23-106 (159)
65 1p5s_A RAS GTPase-activating-l 89.0 0.29 9.9E-06 46.3 3.9 78 350-428 56-144 (203)
66 1wyn_A Calponin-2; CH domain, 88.3 0.47 1.6E-05 42.5 4.7 75 350-427 18-102 (146)
67 4abo_I MAL3, microtubule integ 88.0 0.97 3.3E-05 41.5 6.6 73 351-428 8-90 (145)
68 1wyp_A Calponin 1; CH domain, 87.2 0.46 1.6E-05 42.1 3.8 75 350-427 18-102 (136)
69 1h67_A Calponin alpha; cytoske 87.0 0.34 1.2E-05 41.1 2.8 73 352-427 6-88 (108)
70 1p2x_A RNG2 protein, RAS GTPas 84.9 0.79 2.7E-05 41.6 4.3 77 351-428 13-100 (159)
71 2qjx_A Protein BIM1; calponin 84.7 2.1 7.1E-05 38.3 6.8 72 351-427 12-93 (127)
72 1wyr_A RHO guanine nucleotide 83.8 0.72 2.5E-05 40.1 3.4 74 352-427 9-97 (121)
73 2r8u_A Microtubule-associated 83.4 1.9 6.4E-05 43.0 6.5 74 351-429 17-101 (268)
74 1ujo_A Transgelin; CH domain, 81.8 2.2 7.5E-05 38.1 5.8 76 350-427 10-104 (144)
75 1wym_A Transgelin-2; CH domain 81.5 0.71 2.4E-05 41.7 2.5 76 350-427 18-111 (155)
76 2l3g_A RHO guanine nucleotide 79.8 1.5 5.2E-05 38.5 4.0 77 349-427 12-104 (126)
77 3i6x_A P195, RAS GTPase-activa 71.3 3.6 0.00012 38.6 4.3 77 350-427 48-144 (193)
78 2ee7_A Sperm flagellar protein 68.6 15 0.00052 32.6 7.5 74 91-166 15-90 (127)
79 2rr8_A Iqgap1 protein; F-actin 62.5 4.8 0.00016 37.5 3.2 76 351-427 27-122 (190)
80 1w8x_P Protein P16, protein S, 59.5 4.2 0.00014 35.3 2.1 31 463-493 7-38 (117)
81 3b8m_A Ferric enterobactin (en 34.5 40 0.0014 33.0 4.8 52 395-446 182-235 (280)
82 4abo_I MAL3, microtubule integ 27.6 1.8E+02 0.0061 26.7 7.5 68 94-167 9-79 (145)
83 3uif_A Sulfonate ABC transport 24.1 89 0.0031 29.4 5.1 86 339-427 210-307 (348)
84 4e29_A Chimeric WZZB chain len 22.7 89 0.003 30.6 4.9 51 394-444 147-197 (248)
85 2dsy_A Hypothetical protein TT 22.2 1.2E+02 0.0041 24.6 4.9 68 353-425 6-80 (87)
No 1
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=99.95 E-value=3.3e-29 Score=221.50 Aligned_cols=108 Identities=69% Similarity=1.073 Sum_probs=101.4
Q ss_pred CCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhcccCccccccccccccc-----------ceeeeccccccCCCChh
Q psy2679 328 GMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQFHDG-----------GFFVPLHDFYLTPQTFE 396 (526)
Q Consensus 328 ~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqFaDG-----------gyFIpL~~f~LtP~~~~ 396 (526)
|+|||||+||+|||++|||.++||+||++|||+||++.|++|+||++||+|| +..+|++.|+.+|.++.
T Consensus 1 ~~~~~~~~~~~l~~~~~e~~~~q~ktft~WiN~~L~~~~~~v~dL~~Dl~DGv~L~~Lle~ls~~~~~~~~~~~~p~~r~ 80 (131)
T 2vzc_A 1 SGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFE 80 (131)
T ss_dssp ----CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHGGGTCCCCCTTTTTTTSHHHHHHHHHHTTCCCCTTSSCSSCCSHH
T ss_pred CCCchhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHcCCcccCHHHHcccHHHHHHHHHHhcCCCCCHHHhcCCCCcHH
Confidence 5799999999999999999999999999999999999999999999999999 67788899999999999
Q ss_pred hhHhcHHHHHHHHHHcCCCCCCCCChhhhcccchhhhhH
Q psy2679 397 QKVHNVAFAFQLMQDVGLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 397 qKLhNVslALELLqd~GL~k~~IspeDIvagdaKLtlki 435 (526)
||+|||+.|++++++.|+...+|+++||++|+.|+|+++
T Consensus 81 ~kieNv~~aL~~lk~~gi~l~~I~~~DIvdGn~kliLgL 119 (131)
T 2vzc_A 81 QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRV 119 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSSCHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCCCHHHhhCCCHHhHHHH
Confidence 999999999999999999999999999999999999986
No 2
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.92 E-value=2.4e-24 Score=223.04 Aligned_cols=302 Identities=16% Similarity=0.216 Sum_probs=201.4
Q ss_pred CccHHHHHHHHHHHHhhhhccc----ccc-----ccchhhhhhhhHHHHHHHHHHccCcccccceecCh----HHHHHHH
Q psy2679 86 DPKLQELIFVLIEWINDELADQ----RII-----VKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSE----EGQKQKL 152 (526)
Q Consensus 86 dpk~~el~~~li~WiN~~L~~~----rii-----Vkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~----~~qkqkl 152 (526)
.|+-+|-.+.+++|||+.|+++ +++ |.||.+||+||++|.+|+|+|.+.+++.+.+.++. -.|.+++
T Consensus 2 ~~~~~~q~~~f~~WIN~~L~~~~~~~~~l~~~~~v~~l~~dL~DGv~L~~Lin~l~~~~i~~~~in~~~~~~~~~~~eNi 81 (506)
T 1pxy_A 2 SPGIQSEKGPFVQHINRYLGDDPFLKQFLPLDPHSNQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENH 81 (506)
T ss_dssp -----CTHHHHHHHHHHHHTTCTTTTTTCSCCTTSSHHHHHSTTSHHHHHHHHHHSTTSSCGGGSCCCSSCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhccCccccccCCCCCchhHHHHHhcchHHHHHHHHHHcCCCCCccccCccccccHHHHHHHH
Confidence 3566777899999999999998 333 78999999999999999999999999999888764 3567778
Q ss_pred HHHHHHHHHHcCCCCCCCCcccccccccccchhHHHHHHHHh--hCCCccc--------------C--------------
Q psy2679 153 AIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLA--LGLPRWS--------------N-------------- 202 (526)
Q Consensus 153 ~~vl~~v~~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~--~~~~~~s--------------~-------------- 202 (526)
...|++.. ..|++.-. ..++.|.-.|.-.||+|+-+.. +.++..+ +
T Consensus 82 ~~~L~~~k-~~g~~~~~---i~~~Dl~dg~~~liLgLiw~li~~~~l~~i~~~~~p~l~~l~~~~e~~~~~~~~~~~~~L 157 (506)
T 1pxy_A 82 TLCLNSAK-AVGCSVVN---IGTQDLAEGRPHLVLGLISQLIKIQLLADLNLKKTPQLVELLEDSDDVEELLRLPPEKVL 157 (506)
T ss_dssp HHHHHHHH-HTTCCCTT---CCHHHHHHTCHHHHHHHHHHHHHHHHHSSSSSCC-----------------CCSCHHHHH
T ss_pred HHHHHHHH-HhCCCcCC---CCHHHHhcCChHHHHHHHHHHHHHHHHHhhhhccCHHHHHhhcCCcchhhhhcCCHHHHH
Confidence 88888775 45665422 3566777777778889887775 3232221 0
Q ss_pred Ccc------------ceeecccCchHHHHHHHHHHHHhccCCCCCCCCeEEEEEEEEeccccccchhhhhHHHHHHHHHH
Q psy2679 203 TKW------------SVESIHSKNLVPILHLLVSLVRHFRAPVRLPENVSVGVVVVQLDVPEVTQSEEGQKQKLAIVLEA 270 (526)
Q Consensus 203 ~kw------------sv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (526)
.+| .+.+ ++.++.. -+.+.+|..+|+|..- |...+ +++...+++..+++.
T Consensus 158 L~W~n~~l~~~g~~~~v~n-Fs~s~~D-G~a~~~Ll~~~~P~~i--------------~~~~l--~~~~~~~n~~~a~~~ 219 (506)
T 1pxy_A 158 LKWMNFHLKKGGYKKTVSN-FSADLKD-AQAYAFLLNVLAPEHC--------------DPATL--DAKDPLERAELVLSH 219 (506)
T ss_dssp HHHHHHHHHHTTCCSCCCC-SSTTTTT-SHHHHHHHHHHCGGGC--------------CGGGG--GCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCccCcc-ccccccc-hHHHHHHHHHhCcccc--------------ccccC--CcCCHHHHHHHHHHH
Confidence 122 1111 1112211 2456666667776421 22222 234556777788888
Q ss_pred HHhhcCCCCCCCCccchhhcccccchhhhhhhhhhcc--CCcceeeEEEeeecccccccCCccCCChhhhhhcCCChhHH
Q psy2679 271 VNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKK--EGSLSHRTIKEEITSTYDDLGMRCERDAFDTLFDHHPDKLQ 348 (526)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~l~~~~~~e~it~~~~~~~~~~~~d~fd~lf~~~PeKl~ 348 (526)
..+ ||+|++ +..|.|.+.|.--++-.+-.+-. .| +... +...|+.+.. ..++..
T Consensus 220 a~~-lGi~~~----l~peDi~~~~~k~v~tyva~l~~~~~~-~~~~-----------------~~~~~~~~~~-~~~~~~ 275 (506)
T 1pxy_A 220 AER-MNCKRY----LTAEEIVEGSSTLNLAFVAQIFHERNG-LNKD-----------------GKYAFAEMMT-EDVETC 275 (506)
T ss_dssp HHH-TTCCCC----CCHHHHHTTCHHHHHHHHHHHHHHCCC-CC-------------------------------CCHHH
T ss_pred HHH-cCCCCc----CCHHHHhcCChhHHHHHHHHHhhhcCC-CCCc-----------------cccchhhhhh-hhhHHH
Confidence 875 999984 66788888774323322222221 11 1110 0011222111 236788
Q ss_pred HHHHHHHHHHHHhhcccCcccccccccccccceeeec-----------cccccCC-CChhhhHhcHHHHHHHHHHcCCCC
Q psy2679 349 VVKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPL-----------HDFYLTP-QTFEQKVHNVAFAFQLMQDVGLAK 416 (526)
Q Consensus 349 vVKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL-----------~~f~LtP-~~~~qKLhNVslALELLqd~GL~k 416 (526)
.++|||++|+|.|+ .+..|+||++||+||..++.| ...+..| .++.||++||+.|++++++.|+..
T Consensus 276 ~q~ktf~~WiN~~~--~~~~v~dl~~Dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~r~~~leNv~~aL~~~k~~~v~l 353 (506)
T 1pxy_A 276 RDERCYRLWINSLG--IDSYVNNVFEDVRNGWILLEVLDKVSPSSVNWKHASKPPIKMPFRKVENCNQVIKIGKQLKFSL 353 (506)
T ss_dssp HHHHHHHHHHTTTT--CSSCCSCHHHHTTTSHHHHHHHHHHSTTCCCGGGCCCSSCCCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcC--CCCCcccHHHHHHhHHHHHHHHHHHcCCccccccccCCccccHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999998 468999999999999555432 2233334 588999999999999999999999
Q ss_pred CCCCChhhhcccchhhhhH
Q psy2679 417 PKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 417 ~~IspeDIvagdaKLtlki 435 (526)
.+|+++||++|+.|+|+++
T Consensus 354 ~~I~~~dIvdg~~kl~L~L 372 (506)
T 1pxy_A 354 VNVAGNDIVQGNKKLILGL 372 (506)
T ss_dssp CSCCHHHHHTTCHHHHHHH
T ss_pred cCCCHHHHhcCCHHHHHHH
Confidence 9999999999999999985
No 3
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.89 E-value=1.2e-22 Score=210.96 Aligned_cols=301 Identities=17% Similarity=0.180 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHhhhhccccc---------cccchhhhhhhhHHHHHHHHHHccCcccccceecCh-------HHHHHHHH
Q psy2679 90 QELIFVLIEWINDELADQRI---------IVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSE-------EGQKQKLA 153 (526)
Q Consensus 90 ~el~~~li~WiN~~L~~~ri---------iVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~-------~~qkqkl~ 153 (526)
.+..+++++|||+.|++++- -|.||.+||+||++|.+|+|+|.+.+++...+..++ .-|.+++.
T Consensus 11 ~~q~~~f~~WIN~~L~~~~~~~~~lpi~~~v~dl~~dL~DG~~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~~~~eNi~ 90 (513)
T 1rt8_A 11 EEERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVLNKQRNNKPLDNFKCIENNN 90 (513)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTGGGCSCCTTSTHHHHHTTTSHHHHHHHHHHSTTSSCGGGSCCCC---CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCccccccCCCCCchHHHHHHhhcHHHHHHHHHHHcCCCcchhhcCCccccCcccHHHHHHHHH
Confidence 46678999999999998851 378999999999999999999999988887777642 34567777
Q ss_pred HHHHHHHHHcCCCCCCCCcccccccccccchhHHHHHHHHh--hCCCcccC----------------------------C
Q psy2679 154 IVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLA--LGLPRWSN----------------------------T 203 (526)
Q Consensus 154 ~vl~~v~~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~--~~~~~~s~----------------------------~ 203 (526)
.+|+++.. .|...- ..-.++.|--.|.-.||+|+-+.. +.++..+- .
T Consensus 91 ~~L~~~k~-~g~~~l--~~i~~~DI~dg~~~liLgLiW~li~~~~l~~i~~~~~pel~~l~~~~e~~~~~~~~~~~~~LL 167 (513)
T 1rt8_A 91 VVINSAKA-MGGISI--TNIGAGDILEGREHLILGLVWQIIRRGLLGKIDITLHPELYRLLEEDETLDQFLRLPPEKILL 167 (513)
T ss_dssp HHHHHHHH-HSSCCC--SSCCHHHHHTTCHHHHHHHHHHHHHHHSSCCC----------------CHHHHTTSCHHHHHH
T ss_pred HHHHHHHH-cCCCcc--CCcCHHhhhcCCHHHHHHHHHHHHHHhhhcccccccCHHHHhhhccCCchhhhhcCCHHHHHH
Confidence 77777754 343111 123456666778888999998876 34443210 1
Q ss_pred ccc---ee------ec--ccCchHHHHHHHHHHHHhccCCCCCCCCeEEEEEEEEeccccccchhhhhHHHHHHHHHHHH
Q psy2679 204 KWS---VE------SI--HSKNLVPILHLLVSLVRHFRAPVRLPENVSVGVVVVQLDVPEVTQSEEGQKQKLAIVLEAVN 272 (526)
Q Consensus 204 kws---v~------~I--~~knl~ail~LLVaLa~~f~~~~~lp~nv~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (526)
+|- ++ .| ++.|+.. -+.+.||..+|+|.. +| --..+++...+++..++++..
T Consensus 168 ~W~n~~l~~~g~~~~V~nFs~s~~D-G~a~~aLl~~~~P~~-i~---------------~~~l~~~~~~~n~~~a~~~a~ 230 (513)
T 1rt8_A 168 RWFNYHLKAANWPRTVSNFSKDVSD-GENYTVLLNQLAPEL-CS---------------RAPLQTTDVLQRAEQVLQNAE 230 (513)
T ss_dssp HHHHHHHHHTTCSCCCSCSSGGGTT-SHHHHHHHHHHCTTT-CC---------------SGGGGCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCcccchhhhhc-cHHHHHHHHHHCccc-cc---------------cCCCCccCHHHHHHHHHHHHH
Confidence 230 00 11 1222211 244566777777653 22 112345667889999999888
Q ss_pred hhcCCCCCCCCccchhhcccccchhhhhhhhhhccCC-cceeeEEEeeecccccccCCccCCChhhhhhcCCChhHHHHH
Q psy2679 273 KALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEG-SLSHRTIKEEITSTYDDLGMRCERDAFDTLFDHHPDKLQVVK 351 (526)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~e~it~~~~~~~~~~~~d~fd~lf~~~PeKl~vVK 351 (526)
+ ||+|+|- ..|.|.+.|---++..+-.+-..- .+.... .+++. +-+. |+..+ +.++
T Consensus 231 ~-lgi~~~l----~peDi~~~~~k~il~yva~l~~~~~~~~~~~-~~~~~----------~~~~----~~~e~---~~q~ 287 (513)
T 1rt8_A 231 K-LDCRKYL----TPTAMVAGNPKLNLAFVAHLFNTHPGLEPLN-EEEKP----------EIEP----FDAEG---EREA 287 (513)
T ss_dssp T-TTCCCSC----CHHHHHTTCHHHHHHHHHHHHHHCCCCCC----------------------------CHH---HHHH
T ss_pred H-cCCCccC----CHHHhcCCCHHHHHHHHHHHHhhhcccCccc-chhhh----------hhhh----hcchh---HHHH
Confidence 8 9999964 457777766544554443332211 111110 01111 0011 23222 4789
Q ss_pred HHHHHHHHHhhcccCcccccccccccccceeeec-----------cccccCC-----CChhhhHhcHHHHHHHHHHcCCC
Q psy2679 352 KSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPL-----------HDFYLTP-----QTFEQKVHNVAFAFQLMQDVGLA 415 (526)
Q Consensus 352 kTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL-----------~~f~LtP-----~~~~qKLhNVslALELLqd~GL~ 415 (526)
++|++|||+|. .+..|+||++||+||..++.| .+++.+| .++.++++||+.|++++++.|+.
T Consensus 288 k~f~~WiN~~~--~~~~v~~l~~DL~DG~~L~~Lle~l~~g~v~~~~~~~~p~~~~~~~r~~~~eNv~~al~~~~~~gv~ 365 (513)
T 1rt8_A 288 RVFTLWLNSLD--VTPSIHDFFNNLRDGLILLQAYDKITPNTVNWKKVNKAPASGDEMMRFKAVENCNYAVDLGKNQGFS 365 (513)
T ss_dssp HHHHHHHHHTT--CSSCCSCHHHHTTTSHHHHHHHHHHSTTCCCGGGSCCCCTTSCCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcC--CCCCccCHHHHHhhHHHHHHHHHHhCCCCcchhhhcCCcccccccchHHHHHHHHHHHHHHHHcCce
Confidence 99999999994 567899999999999655533 3445557 47889999999999999999999
Q ss_pred CCCCCChhhhcccchhhhhH
Q psy2679 416 KPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 416 k~~IspeDIvagdaKLtlki 435 (526)
..+|+++||++|+.|+|+++
T Consensus 366 lv~i~~~DIvdg~~~~~LgL 385 (513)
T 1rt8_A 366 LVGIQGADITDGSRTLTLAL 385 (513)
T ss_dssp CTTCCHHHHHTTCHHHHHHH
T ss_pred eeccchhhhhcCCchhhHHH
Confidence 99999999999999999886
No 4
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=99.88 E-value=7.6e-23 Score=199.81 Aligned_cols=231 Identities=23% Similarity=0.303 Sum_probs=150.5
Q ss_pred CCCCcccccccccccccccCCCCCCCccHHHHHH-HHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCccccc
Q psy2679 61 PDLAPEEYALEENEERSMLEPRAYDDPKLQELIF-VLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVP 139 (526)
Q Consensus 61 ~~~~p~~~~l~e~e~r~~~~p~s~~dpk~~el~~-~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ 139 (526)
..-.|+.|.+.|+||+.+.++.+.+||+.++.++ +++.|||+.|+..++.|.||++||+||++|.+|+|+|.|.++ .+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~vQkktft~WiN~~L~~~~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l-~~ 94 (272)
T 3hoc_A 16 AGAAPGGGVDTRDAEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKM-HR 94 (272)
T ss_dssp --------------------------CGGGGHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTSCC-SS
T ss_pred cccCCCCCccchhhhccccchhhhhChhHHHHHHHHHHHHHHHHhccCCCCcccHHHHHhhHHHHHHHHHHHcCCcc-cc
Confidence 4556899999999999999999999999999998 799999999999999999999999999999999999999998 35
Q ss_pred ceecChHH---HHHHHHHHHHHHHHHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchH
Q psy2679 140 EVTQSEEG---QKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLV 216 (526)
Q Consensus 140 ev~~s~~~---qkqkl~~vl~~v~~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ 216 (526)
.+...... +.+|+..+|+++. ..|..- ..=+.++|+++|..
T Consensus 95 ~~~~~p~~r~~kleNv~~aL~~lk-~~gv~l-----------------------------------vnI~~~DIvdGn~k 138 (272)
T 3hoc_A 95 KHNQRPTFRQMQLENVSVALEFLD-RESIKL-----------------------------------VSIDSKAIVDGNLK 138 (272)
T ss_dssp CCCSSCCSHHHHHHHHHHHHHHHH-HTTCCC-----------------------------------SSCCHHHHHTTCHH
T ss_pred ccCCCCccHHHHHHHHHHHHHHHH-HcCCcc-----------------------------------cccccchhhcCCHH
Confidence 55443323 3556666666664 333321 11236899999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCCeEEEEEEEEeccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccch
Q psy2679 217 PILHLLVSLVRHFRAPVRLPENVSVGVVVVQLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLV 296 (526)
Q Consensus 217 ail~LLVaLa~~f~~~~~lp~nv~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (526)
.||+||..|.+||+-... .
T Consensus 139 liLgLlW~Li~~~~i~~l----------~--------------------------------------------------- 157 (272)
T 3hoc_A 139 LILGLIWTLILHYSISMP----------M--------------------------------------------------- 157 (272)
T ss_dssp HHHHHHHHHHHHHHTTCC--------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhhhhh----------h---------------------------------------------------
Confidence 999999999999983210 0
Q ss_pred hhhhhhhhhccCCcceeeEEEeeecccccccCCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhcccCcccccccccc
Q psy2679 297 PILHLLVSLKKEGSLSHRTIKEEITSTYDDLGMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQF 376 (526)
Q Consensus 297 ~~~~~~~~~~~~g~l~~~~~~e~it~~~~~~~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqF 376 (526)
.+| |... + .++. ..|+.|++|||.|+. |.+|+|..++|
T Consensus 158 ----------~~~--------e~~~----~-----------------~~~~-s~k~~LL~W~n~~~~--~~~I~nFs~sw 195 (272)
T 3hoc_A 158 ----------WDE--------EEDE----E-----------------AKKQ-TPKQRLLGWIQNKLP--QLPITNFSRDW 195 (272)
T ss_dssp --------------------------------------------------C-CHHHHHHHHHHHHCT--TSCCCCSSGGG
T ss_pred ----------ccc--------cccc----c-----------------cccc-CHHHHHHHHHHhhCC--CCCCCChhhcc
Confidence 011 0000 0 0111 237899999999986 78999999999
Q ss_pred cccceeeec-cccc--cCC----CChhhhHhcHHHHHHHHHH-cCCCCCCCCChhhhc--ccchhh
Q psy2679 377 HDGGFFVPL-HDFY--LTP----QTFEQKVHNVAFAFQLMQD-VGLAKPKARPEDEFA--KHARLS 432 (526)
Q Consensus 377 aDGgyFIpL-~~f~--LtP----~~~~qKLhNVslALELLqd-~GL~k~~IspeDIva--gdaKLt 432 (526)
+||..|+.| +.|. +.| -+...+.+|...||+..++ .|+. +-+.|+|++. .|.|.+
T Consensus 196 ~DG~af~aLi~~~~P~li~d~~~l~~~~~~~n~~~Af~~Ae~~lGi~-~ll~peDiv~~~pD~ksi 260 (272)
T 3hoc_A 196 QSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIP-QVITPEEIVDPNVDKHSV 260 (272)
T ss_dssp TTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHHCCC-CSSCHHHHTCTTCCHHHH
T ss_pred cchHHHHHHHHHhCcccccchhhcCccCHHHHHHHHHHHHHHhCCCC-ccCCHHHhccCCCChHHH
Confidence 999777754 2221 111 2345789999999999998 8995 6899999998 566655
No 5
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=99.85 E-value=1.4e-20 Score=181.28 Aligned_cols=217 Identities=17% Similarity=0.312 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHhhhhcccc-------c--cccchhhhhhhhHHHHHHHHHHccCcccccceecCh---HHHHHHHHHHHH
Q psy2679 90 QELIFVLIEWINDELADQR-------I--IVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSE---EGQKQKLAIVLE 157 (526)
Q Consensus 90 ~el~~~li~WiN~~L~~~r-------i--iVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~---~~qkqkl~~vl~ 157 (526)
.+-.+.++.|||+.|++.+ | .|.||.+||+||++|.+|+|+|.+..++...+.... -.+.+++..+|+
T Consensus 23 ~~q~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~~~~i~~~~~~~~~~~eNv~~aL~ 102 (275)
T 1aoa_A 23 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALN 102 (275)
T ss_dssp HHHHHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSCGGGSCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCCccccCCCCCCHHHHHHHHHHHHH
Confidence 3566889999999999863 2 489999999999999999999999988766665432 345666777777
Q ss_pred HHHHHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhcc-CCCCCC
Q psy2679 158 AVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFR-APVRLP 236 (526)
Q Consensus 158 ~v~~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~-~~~~lp 236 (526)
++.+ .|+.- ..-..++|+++|...||.||..|.++|. ..++++
T Consensus 103 ~~k~-~g~~l-----------------------------------~~I~~~DIvdg~~~liLgLlw~li~~~~~~~I~~~ 146 (275)
T 1aoa_A 103 SASA-IGCHV-----------------------------------VNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELS 146 (275)
T ss_dssp HHHH-TTCCC-----------------------------------TTCCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHH-cCCcc-----------------------------------cCCCHHHHHcCcHHHHHHHHHHHHHHhhhcccccc
Confidence 6642 34332 1124689999999999999999999986 111110
Q ss_pred CCeEEEEEEEEeccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEE
Q psy2679 237 ENVSVGVVVVQLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTI 316 (526)
Q Consensus 237 ~nv~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 316 (526)
++ |-+ .++.++
T Consensus 147 ------------------------------------------~~----------------~~l---~~ll~~-------- 157 (275)
T 1aoa_A 147 ------------------------------------------RN----------------EAL---AALLRD-------- 157 (275)
T ss_dssp ------------------------------------------CT----------------TCC-----------------
T ss_pred ------------------------------------------cC----------------hHH---HHhhcc--------
Confidence 00 000 000011
Q ss_pred EeeecccccccCCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhcccCcc-cccccccccccceeeec----------
Q psy2679 317 KEEITSTYDDLGMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKVNLE-VTDLDTQFHDGGFFVPL---------- 385 (526)
Q Consensus 317 ~e~it~~~~~~~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~KlnL~-VtDLetqFaDGgyFIpL---------- 385 (526)
...+|+++++.| ++.+++|||+||.+.|.. |+|..++|+||..|+.|
T Consensus 158 ----------------ge~~~~~~~~s~------~~~LL~W~n~~l~~~g~~~I~nF~~s~~DG~a~~aLi~~~~P~~~~ 215 (275)
T 1aoa_A 158 ----------------GETLEELMKLSP------EELLLRWANFHLENSGWQKINNFSADIKDSKAYFHLLNQIAPKGQK 215 (275)
T ss_dssp ------------------CHHHHHTSCH------HHHHHHHHHHHHHHTTCCCCSCSSTTTTTSHHHHHHHHHHSCCSCS
T ss_pred ----------------CCchhhhhccCH------HHHHHHHHHHHHHhcCCCcchhhhhhhhhhHHHHHHHHHHCCCccc
Confidence 123567777765 788999999999999876 99999999999655533
Q ss_pred -ccc----ccCCCChhhhHhcHHHHHHHHHHcCCCCCCCCChhhhcccchhhhh
Q psy2679 386 -HDF----YLTPQTFEQKVHNVAFAFQLMQDVGLAKPKARPEDEFAKHARLSRK 434 (526)
Q Consensus 386 -~~f----~LtP~~~~qKLhNVslALELLqd~GL~k~~IspeDIvagdaKLtlk 434 (526)
+.| ...+.+...+.+|...||+..++.|+ .+-+.|+||++++.|+++-
T Consensus 216 ~~~~~l~~~~~~~~~~~~~~n~~~a~~~A~~lGi-~~~l~peDi~~~~~k~i~t 268 (275)
T 1aoa_A 216 EGEPRIDINMSGFNETDDLKRAESMLQQADKLGC-RQFVTPADVVSGNPKLNLA 268 (275)
T ss_dssp SSCCCCCCCCTTTTCSSHHHHHHHHHHHHTTTTC-CCSCCHHHHHTTCHHHHHH
T ss_pred cccccccccccCCCccCHHHHHHHHHHHHHHcCC-CCcCCHHHcCCCChhHHHH
Confidence 112 22344567889999999999999999 5689999999999988754
No 6
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=99.81 E-value=1.8e-19 Score=171.57 Aligned_cols=209 Identities=21% Similarity=0.304 Sum_probs=148.0
Q ss_pred CCCccHHHHH-HHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHH---HHHHHHHHHHH
Q psy2679 84 YDDPKLQELI-FVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQ---KQKLAIVLEAV 159 (526)
Q Consensus 84 ~~dpk~~el~-~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~q---kqkl~~vl~~v 159 (526)
.+|++-.+.+ +++..|||+.|++.+..|.||.+||+||++|.+|+|+|.|.++. +.+..+...+ -+++..+|+++
T Consensus 12 ~~~~~~~~~q~~~f~~WiN~~L~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~~~-~~~n~~~~~~~~~~eNv~~aL~~~ 90 (245)
T 2wa7_A 12 AEDAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMY-RKYHQRPTFRQMQLENVSVALEFL 90 (245)
T ss_dssp ---CGGGGHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCS-SCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHHHHHHHHHHhccccCCCccCHHHHcccHHHHHHHHHHHcCCCCc-hhcCCCCCcHHHHHHHHHHHHHHH
Confidence 3444444443 47999999999998899999999999999999999999999884 5665544333 45555556655
Q ss_pred HHHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccCCCCCCCCe
Q psy2679 160 NKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRAPVRLPENV 239 (526)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv 239 (526)
.+ .|+.- ..-..++|+++|...||+||..|.+||+....+
T Consensus 91 k~-~g~~l-----------------------------------v~I~~~DIvdG~~kliLgLlW~li~~~~i~~~~---- 130 (245)
T 2wa7_A 91 DR-ESIKL-----------------------------------VSIDSKAIVDGNLKLILGLVWTLILHYSISMPV---- 130 (245)
T ss_dssp HH-TTCCC-----------------------------------CSCCHHHHHTTCHHHHHHHHHHHHHHHHTTSSC----
T ss_pred HH-cCCcc-----------------------------------cCCCHHHhhCCCHHHHHHHHHHHHHHHcccccc----
Confidence 43 34332 122468999999999999999999999853211
Q ss_pred EEEEEEEEeccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEEEee
Q psy2679 240 SVGVVVVQLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTIKEE 319 (526)
Q Consensus 240 ~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~e~ 319 (526)
.+|.
T Consensus 131 -------------------------------------------------------------------~~~~--------- 134 (245)
T 2wa7_A 131 -------------------------------------------------------------------WEDE--------- 134 (245)
T ss_dssp -------------------------------------------------------------------CSSC---------
T ss_pred -------------------------------------------------------------------cccc---------
Confidence 0110
Q ss_pred ecccccccCCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhcccCcccccccccccccceeeecc-cc------ccCC
Q psy2679 320 ITSTYDDLGMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPLH-DF------YLTP 392 (526)
Q Consensus 320 it~~~~~~~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL~-~f------~LtP 392 (526)
+. + .+++. ..++.+++|||.|+. |.+|+|..++|+||..|..|- .| ...+
T Consensus 135 -~~--~-----------------~~~~~-~~~~~LL~W~~~~~~--~~~v~nFs~s~~dG~a~~aLi~~~~P~~i~~~~~ 191 (245)
T 2wa7_A 135 -GD--D-----------------DAKKQ-TPKQRLLGWIQNKIP--YLPITNFNQNWQDGKALGALVDSCAPGLCPDWES 191 (245)
T ss_dssp -C-----------------------CCC-CHHHHHHHHHHHHST--TSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGG
T ss_pred -cc--c-----------------ccccc-cHHHHHHHHHHHhCC--CCCCCCCcccchhhHHHHHHHHHHCccccccccc
Confidence 00 0 01111 247899999999997 588999999999997766542 22 1122
Q ss_pred CChhhhHhcHHHHHHHHHH-cCCCCCCCCChhhhc--ccchhhh
Q psy2679 393 QTFEQKVHNVAFAFQLMQD-VGLAKPKARPEDEFA--KHARLSR 433 (526)
Q Consensus 393 ~~~~qKLhNVslALELLqd-~GL~k~~IspeDIva--gdaKLtl 433 (526)
-+...+.+|...||+..++ .|+. +-+.|+|+++ -|.|+..
T Consensus 192 l~~~~~~~n~~~a~~~A~~~lGi~-~~l~peDi~~~~~d~ksi~ 234 (245)
T 2wa7_A 192 WDPQKPVDNAREAVQQADDWLGVP-QVITPEEIIHPDVDEHSVM 234 (245)
T ss_dssp SCTTCHHHHHHHHHHHHHHHSCCC-CSSCHHHHTCTTCCHHHHH
T ss_pred cCcccHHHHHHHHHHHHHHhCCCC-ccCCHHHhccCCCcHHHHH
Confidence 3456789999999999998 8996 5699999999 4556553
No 7
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=99.80 E-value=2.7e-19 Score=170.32 Aligned_cols=211 Identities=17% Similarity=0.238 Sum_probs=153.9
Q ss_pred CCCCCCccHHHHHHHHHHHHhhhhccccc-cccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHH
Q psy2679 81 PRAYDDPKLQELIFVLIEWINDELADQRI-IVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAV 159 (526)
Q Consensus 81 p~s~~dpk~~el~~~li~WiN~~L~~~ri-iVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v 159 (526)
+-+..|++-..-.++++.|||+.|++.++ .|.||++||+||++|.+|+|+|.|.++... -..+...+.+++..+|+++
T Consensus 6 ~~~~~~e~~~~q~~~f~~WiN~~L~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~-~~~~~~~~~eNv~~aL~~~ 84 (246)
T 1dxx_A 6 EVEDSYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKE-KGSTRVHALNNVNKALRVL 84 (246)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHHHTTCCCCSCTTTTTTTSHHHHHHHHHHHSCCCCCC-CCSSHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHhccccCCCCccCHHHHhCcHHHHHHHHHHHcCCcCCCC-CCccHHHHHHHHHHHHHHH
Confidence 34556677777788999999999998875 699999999999999999999999988752 2333345667777777777
Q ss_pred HHHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccCCCCCCCCe
Q psy2679 160 NKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRAPVRLPENV 239 (526)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv 239 (526)
.+ .|..- ..-..++|+++|...||+||..|.+||+.+.
T Consensus 85 k~-~g~~l-----------------------------------~~I~~~DIvdg~~~liL~Llw~li~~~~i~~------ 122 (246)
T 1dxx_A 85 QN-NNVDL-----------------------------------VNIGSTDIVDGNHKLTLGLIWNIILHWQVKN------ 122 (246)
T ss_dssp HH-TTCCC-----------------------------------TTCCHHHHHTTCHHHHHHHHHHHHHHHTTTH------
T ss_pred HH-cCCcc-----------------------------------ccCCHHHhhcccHHHHHHHHHHHHHHHHHhh------
Confidence 53 34322 1234789999999999999999999997431
Q ss_pred EEEEEEEEeccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEEEee
Q psy2679 240 SVGVVVVQLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTIKEE 319 (526)
Q Consensus 240 ~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~e~ 319 (526)
++.|
T Consensus 123 --------------------------~~~e-------------------------------------------------- 126 (246)
T 1dxx_A 123 --------------------------VMKN-------------------------------------------------- 126 (246)
T ss_dssp --------------------------HHHH--------------------------------------------------
T ss_pred --------------------------hhhh--------------------------------------------------
Confidence 0000
Q ss_pred ecccccccCCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhccc-CcccccccccccccceeeeccccccCCC-----
Q psy2679 320 ITSTYDDLGMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPLHDFYLTPQ----- 393 (526)
Q Consensus 320 it~~~~~~~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL~~f~LtP~----- 393 (526)
+. ++ ++ + ...++.+++|||+|+++. |.+|+|..++|+||..|..|-..+ .|.
T Consensus 127 ~~---~~---------~~--------~-~~~~~~LL~W~~~~~~~~~~~~i~nFs~s~~DG~a~~aLi~~~-~P~li~~~ 184 (246)
T 1dxx_A 127 IM---AG---------LQ--------Q-TNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSH-RPDLFDWN 184 (246)
T ss_dssp HH---HH---------HT--------T-CCHHHHHHHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHHHHH-CGGGSCHH
T ss_pred hh---hh---------cc--------c-ccHHHHHHHHHHHHhccCCCCCcCCCcccchhHHHHHHHHHHH-CcCccchh
Confidence 00 00 00 0 125689999999999988 799999999999997777553221 121
Q ss_pred ---ChhhhHhcHHHHHHHHH-HcCCCCCCCCChhhhcccc--hhhh
Q psy2679 394 ---TFEQKVHNVAFAFQLMQ-DVGLAKPKARPEDEFAKHA--RLSR 433 (526)
Q Consensus 394 ---~~~qKLhNVslALELLq-d~GL~k~~IspeDIvagda--KLtl 433 (526)
......+|+..||+..+ +.|+. +-+.|+|++.++. |++.
T Consensus 185 ~~~~~~~~~~n~~~a~~~A~~~lGi~-~~l~peDi~~~~pD~k~i~ 229 (246)
T 1dxx_A 185 SVVSQQSATQRLEHAFNIARYQLGIE-KLLDPEDVDTTYPDKKSIL 229 (246)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHTTCCC-CCCCHHHHSSSSCCHHHHH
T ss_pred hhcccCCHHHHHHHHHHHHHHhCCCC-ccCCHHHhhcCCCcHHHHH
Confidence 13456789999999998 68996 5699999998776 7664
No 8
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.79 E-value=9.5e-19 Score=165.88 Aligned_cols=206 Identities=21% Similarity=0.307 Sum_probs=150.7
Q ss_pred CccHHHHHHHHHHHHhhhhcc-----ccccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHH
Q psy2679 86 DPKLQELIFVLIEWINDELAD-----QRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVN 160 (526)
Q Consensus 86 dpk~~el~~~li~WiN~~L~~-----~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~ 160 (526)
|.+-..-.++++.|||+.|++ .+..|.||.+||+||++|.+|+|+|.|.++... -..+...+.+++..+|+++.
T Consensus 7 ~e~~~~q~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~-~~~~~~~~~eNv~~aL~~~k 85 (245)
T 1sh5_A 7 DERDRVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPRE-KGRMRFHKLQNVQIALDYLR 85 (245)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCC-CCCSHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCccccCC-CCcchHHHHHhHHHHHHHHH
Confidence 344445567899999999998 557899999999999999999999999998742 22234455677777777775
Q ss_pred HHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccCCCCCCCCeE
Q psy2679 161 KALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRAPVRLPENVS 240 (526)
Q Consensus 161 ~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv~ 240 (526)
+ .|..- ..-..++|+++|...||+||..|.+||+.+.
T Consensus 86 ~-~g~~l-----------------------------------~~I~~~DIvdg~~k~iLgLlw~li~~~~i~~------- 122 (245)
T 1sh5_A 86 H-RQVKL-----------------------------------VNIRNDDIADGNPKLTLGLIWTIILHFQISD------- 122 (245)
T ss_dssp H-TTCCC-----------------------------------CSCCHHHHHTTCHHHHHHHHHHHHHHHTTTT-------
T ss_pred H-cCCcc-----------------------------------cCCChHhhhcccHHHHHHHHHHHHHhhcccc-------
Confidence 4 34322 1124689999999999999999999998531
Q ss_pred EEEEEEEeccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEEEeee
Q psy2679 241 VGVVVVQLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTIKEEI 320 (526)
Q Consensus 241 v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~e~i 320 (526)
+. .+|.
T Consensus 123 -----i~-----------------------------------------------------------~~g~---------- 128 (245)
T 1sh5_A 123 -----IQ-----------------------------------------------------------VSGQ---------- 128 (245)
T ss_dssp -----CC-----------------------------------------------------------CTTC----------
T ss_pred -----cc-----------------------------------------------------------cccc----------
Confidence 00 0110
Q ss_pred cccccccCCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhccc-Ccccccccccccccceeeec-cccccC--CC---
Q psy2679 321 TSTYDDLGMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYLT--PQ--- 393 (526)
Q Consensus 321 t~~~~~~~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~Lt--P~--- 393 (526)
. +++ ..++++++|||+|+++. |++|+|+.++|+||..|..| +.|... |-
T Consensus 129 ------------~-----------~~~-~~~~~LL~W~~~~~~~~~~~~v~nF~~s~~DG~a~~aLi~~~~P~~i~~~~l 184 (245)
T 1sh5_A 129 ------------S-----------EDM-TAKEKLLLWSQRMVEGYQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKV 184 (245)
T ss_dssp ------------C-----------SSC-CHHHHHHHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHHHHTTCTTTCCHHHH
T ss_pred ------------c-----------ccC-CHHHHHHHHHHHHhccCCCcccCCccccccchHHHHHHHHHHCCCCCCHHHc
Confidence 0 001 24688999999999986 79999999999999777765 333211 10
Q ss_pred ChhhhHhcHHHHHHHHHH-cCCCCCCCCChhhhcc--cchhhhh
Q psy2679 394 TFEQKVHNVAFAFQLMQD-VGLAKPKARPEDEFAK--HARLSRK 434 (526)
Q Consensus 394 ~~~qKLhNVslALELLqd-~GL~k~~IspeDIvag--daKLtlk 434 (526)
+...+.+|...||+..++ .|+. +-+.|+|++.. |.|+..-
T Consensus 185 ~~~~~~~n~~~a~~~a~~~lGi~-~~l~peDi~~~~pd~k~i~t 227 (245)
T 1sh5_A 185 YRQTNLENLDQAFSVAERDLGVT-RLLDPEDVDVPQPDEKSIIT 227 (245)
T ss_dssp HHSCHHHHHHHHHHHHHHHHCCC-CCCCHHHHSSSSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHhCCCC-ccCCHHHhccCCCcHHHHHH
Confidence 134678999999999996 8996 45899999854 6676643
No 9
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.76 E-value=4.7e-18 Score=168.12 Aligned_cols=207 Identities=20% Similarity=0.307 Sum_probs=153.3
Q ss_pred CCCCccHHHHHHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHH
Q psy2679 83 AYDDPKLQELIFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKA 162 (526)
Q Consensus 83 s~~dpk~~el~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~ 162 (526)
++.|.+-..-.+++..|||+.|++..+.|.||++||+||++|.+|+|+|.|.++.... ..+..-+.+|+..+|+++.+
T Consensus 65 ~~~~e~~~vQkktft~WINs~L~~~~~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~~~-~~~r~~kleNvn~aL~~lk~- 142 (296)
T 3f7p_A 65 RIADERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREK-GRMRFHKLQNVQIALDYLRH- 142 (296)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCCC-CSSHHHHHHHHHHHHHHHHH-
T ss_pred hhhhhHHHHHHHHHHHHHHHHcccCCCCcccHHHHHhhHHHHHHHHHHhcCCcccccC-CcChhhhhhhHHHHHHHHHH-
Confidence 4566766677789999999999998889999999999999999999999999987632 22334556777777777743
Q ss_pred cCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccCCCCCCCCeEEE
Q psy2679 163 LGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRAPVRLPENVSVG 242 (526)
Q Consensus 163 l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv~v~ 242 (526)
.|+.- ..=..++|+++|...||.||..|.+||+...
T Consensus 143 ~gv~l-----------------------------------v~I~~~DIvdGn~kliLgLlW~Li~~~~i~~--------- 178 (296)
T 3f7p_A 143 RQVKL-----------------------------------VNIRNDDIADGNPKLTLGLIWTIILHFQISD--------- 178 (296)
T ss_dssp TTCCC-----------------------------------TTCCHHHHHTTCHHHHHHHHHHHHHHHTTTT---------
T ss_pred hCccc-----------------------------------cCCChhhhhccchHHHHHHHHHhhcccceee---------
Confidence 33321 1113689999999999999999999997320
Q ss_pred EEEEEeccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEEEeeecc
Q psy2679 243 VVVVQLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTIKEEITS 322 (526)
Q Consensus 243 vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~e~it~ 322 (526)
+ ..+|.
T Consensus 179 ---i-----------------------------------------------------------~~~g~------------ 184 (296)
T 3f7p_A 179 ---I-----------------------------------------------------------QVSGQ------------ 184 (296)
T ss_dssp ---C-----------------------------------------------------------CCSSC------------
T ss_pred ---e-----------------------------------------------------------eccCC------------
Confidence 0 00121
Q ss_pred cccccCCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhccc-CcccccccccccccceeeeccccccCCC-------C
Q psy2679 323 TYDDLGMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPLHDFYLTPQ-------T 394 (526)
Q Consensus 323 ~~~~~~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL~~f~LtP~-------~ 394 (526)
+ + + -..|++|++|||+|++.- |++|+|+.++|+||..|+.|-..+ .|. .
T Consensus 185 -----~--------~--------~-~s~k~~LL~W~n~~~~~y~~v~I~nFs~sw~DG~af~aLI~~~-~P~lid~~~l~ 241 (296)
T 3f7p_A 185 -----S--------E--------D-MTAKEKLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRH-KPLLIDMNKVY 241 (296)
T ss_dssp -----C--------T--------T-SCHHHHHHHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHHHHHH-CGGGCCHHHHT
T ss_pred -----c--------c--------c-CCHHHHHHHHHHHHhcCCCCCcCCCccccccccHHHHHHHHHH-CcCccCHHHcC
Confidence 0 0 0 024789999999999976 799999999999997777542221 121 2
Q ss_pred hhhhHhcHHHHHHHHH-HcCCCCCCCCChhhhcc--cchhhh
Q psy2679 395 FEQKVHNVAFAFQLMQ-DVGLAKPKARPEDEFAK--HARLSR 433 (526)
Q Consensus 395 ~~qKLhNVslALELLq-d~GL~k~~IspeDIvag--daKLtl 433 (526)
...+.+|+.+||+..+ +.|+. .-+.|+||+.. |.|++.
T Consensus 242 ~~~~~~N~~~Af~~Ae~~LGi~-~ll~pEDi~~~~pDeksim 282 (296)
T 3f7p_A 242 RQTNLENLDQAFSVAERDLGVT-RLLDPEDVDVPQPDEKSII 282 (296)
T ss_dssp TSCHHHHHHHHHHHHHHHHCCC-CCCCHHHHSSSSCCHHHHH
T ss_pred cccHHHHHHHHHHHHHHhCCCC-ccCCHHHhcCCCCcHHHHH
Confidence 3467899999999994 79995 56899999774 557664
No 10
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=99.75 E-value=6.6e-18 Score=169.12 Aligned_cols=204 Identities=25% Similarity=0.376 Sum_probs=145.8
Q ss_pred CCccHHHHH-HHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCccccccee-cC-hHHHHHHHHHHHHHHHH
Q psy2679 85 DDPKLQELI-FVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVT-QS-EEGQKQKLAIVLEAVNK 161 (526)
Q Consensus 85 ~dpk~~el~-~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~-~s-~~~qkqkl~~vl~~v~~ 161 (526)
+|+.-++.+ +++..|||+.|++.+.-|.||.+||.||.+|.+|+|+|+|.++..+-.. +. ..-+.+|+..+|+++.+
T Consensus 10 ~d~~we~iQ~ktFt~WiN~~L~~~~~~V~dL~~Dl~DG~~L~~Lle~ls~~~l~~~~~~~p~~r~~k~eNv~~al~~~~~ 89 (347)
T 4b7l_A 10 EDAPWKKIQQNTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDR 89 (347)
T ss_dssp ---CHHHHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCcCCCCcCCHHHHhcCHHHHHHHHHHHcCCccChhhcCCcccHHHHHHHHHHHHHHHHH
Confidence 477666665 6899999999999999999999999999999999999999999654221 22 22334566666666643
Q ss_pred HcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccCCCCCCCCeEE
Q psy2679 162 ALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRAPVRLPENVSV 241 (526)
Q Consensus 162 ~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv~v 241 (526)
.|..- ..++.++|+++|...||.||..|.+||+-...+.++
T Consensus 90 -~g~~l-----------------------------------v~i~~~DIvdGn~~liLgLiW~li~~~~i~~~~~~~--- 130 (347)
T 4b7l_A 90 -ESIKL-----------------------------------VSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWED--- 130 (347)
T ss_dssp -TTCCC-----------------------------------SSCCHHHHHTTCHHHHHHHHHHHHHHHHTTSSCCC----
T ss_pred -hcccc-----------------------------------CCCCcchhhcCCHhhHHHHHHHHHHHHhhhhhhccc---
Confidence 23222 456789999999999999999999999843211100
Q ss_pred EEEEEEeccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEEEeeec
Q psy2679 242 GVVVVQLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTIKEEIT 321 (526)
Q Consensus 242 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~e~it 321 (526)
++
T Consensus 131 ------------------------------------------------------------------~~------------ 132 (347)
T 4b7l_A 131 ------------------------------------------------------------------EG------------ 132 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------cc------------
Confidence 00
Q ss_pred ccccccCCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhcccCcccccccccccccceeeeccc-cc--cCC----CC
Q psy2679 322 STYDDLGMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPLHD-FY--LTP----QT 394 (526)
Q Consensus 322 ~~~~~~~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL~~-f~--LtP----~~ 394 (526)
.++ . + -..-|+.|++|||.|+. |..|+|..++|+||..|+.|-. |. +-| -+
T Consensus 133 --~~~-~---~--------------~~~~k~~LL~W~~~~~~--~~~v~nF~~sw~DG~af~aLi~~~~P~~~~d~~~l~ 190 (347)
T 4b7l_A 133 --DDD-A---K--------------KQTPKQRLLGWIQNKIP--YLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWD 190 (347)
T ss_dssp ----------C--------------CCCHHHHHHHHHHHHCT--TSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSC
T ss_pred --chh-h---h--------------hhhHHHHHHHHHHhhCC--CcccCCCCCCccchHHHHHHHHHhCCccccchhhcC
Confidence 000 0 0 00236889999999996 5669999999999977776532 32 112 13
Q ss_pred hhhhHhcHHHHHHHHHH-cCCCCCCCCChhhhccc
Q psy2679 395 FEQKVHNVAFAFQLMQD-VGLAKPKARPEDEFAKH 428 (526)
Q Consensus 395 ~~qKLhNVslALELLqd-~GL~k~~IspeDIvagd 428 (526)
...+++|...||+..++ .|+. .-+.|+|+++..
T Consensus 191 ~~~~~~n~~~Af~~Ae~~lGip-~ll~peDi~~~~ 224 (347)
T 4b7l_A 191 PQKPVDNAREAMQQADDWLGVP-QVITPEEIIHPD 224 (347)
T ss_dssp TTCHHHHHHHHHHHHHHHHCCC-CSSCHHHHTCTT
T ss_pred cCCHHHHHHHHHHHHHHhcCCC-cccCHHHcCCCC
Confidence 45779999999999997 7994 578999998753
No 11
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.74 E-value=2.9e-18 Score=183.43 Aligned_cols=189 Identities=20% Similarity=0.318 Sum_probs=151.0
Q ss_pred HHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCCCCCc
Q psy2679 93 IFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTK 172 (526)
Q Consensus 93 ~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~~~~~ 172 (526)
.++++.|||+.|++.++.|.||.+||+||++|.+|+|+|.|.+++.+.-..+...+.+|+..+|+++.. .|+.-
T Consensus 10 ~~~f~~Win~~L~~~~~~v~~l~~dl~DG~~L~~l~e~l~~~~~~~~~~~~~~~~~~eN~~~~l~~~~~-~g~~~----- 83 (863)
T 1sjj_A 10 RKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIAS-KGVKL----- 83 (863)
T ss_dssp HHHHHHHHHHHHHHHCSCCCCCSSTTSSCHHHHHHHHHTSCCCCCCSCCCSSHHHHHHHHHHHHHHHHH-TTCCC-----
T ss_pred HHHHHHHHHHHhccCCCCccCHHHHhcCHHHHHHHHHHhCCCceeCCCCCccHHHHHHHHHHHHHHHHH-cCCcc-----
Confidence 357999999999999999999999999999999999999999998877666778888999999999865 44432
Q ss_pred ccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccCCCCCCCCeEEEEEEEEecccc
Q psy2679 173 WSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRAPVRLPENVSVGVVVVQLDVPE 252 (526)
Q Consensus 173 ~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv~v~vv~~~~~~~~ 252 (526)
..++.++|+++|...||.||..|.+||+-. .
T Consensus 84 ------------------------------~~i~~~di~~g~~~~~l~l~w~l~~~~~~~--------------~----- 114 (863)
T 1sjj_A 84 ------------------------------VSIGAEEIVDGNVKMTLGMIWTIILRFAIQ--------------D----- 114 (863)
T ss_dssp ------------------------------TTCCSHHHHTTCHHHHHHHHHHHHSCCCCC--------------C-----
T ss_pred ------------------------------CCCChHHhhcCCHHHHHHHHHHHHHHHhhc--------------c-----
Confidence 457789999999999999999999999821 0
Q ss_pred ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEEEeeecccccccCCccC
Q psy2679 253 VTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTIKEEITSTYDDLGMRCE 332 (526)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~e~it~~~~~~~~~~~ 332 (526)
+ .+ +
T Consensus 115 ~------------------------------------------------------~~---------------~------- 118 (863)
T 1sjj_A 115 I------------------------------------------------------SV---------------E------- 118 (863)
T ss_dssp C------------------------------------------------------CC---------------C-------
T ss_pred c------------------------------------------------------ch---------------h-------
Confidence 0 00 0
Q ss_pred CChhhhhhcCCChhHHHHHHHHHHHHHHhhccc-Ccccccccccccccceeeec-cccccC--C---CChhhhHhcHHHH
Q psy2679 333 RDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYLT--P---QTFEQKVHNVAFA 405 (526)
Q Consensus 333 ~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~Lt--P---~~~~qKLhNVslA 405 (526)
+..| ++.|++|||.|++.. |++|+|..++|+||..|+.| +.|... | -....+.+|...|
T Consensus 119 --------~~~~------~~~ll~W~~~~~~~~~~~~v~nf~~s~~dg~~~~~li~~~~p~~~~~~~~~~~~~~~n~~~a 184 (863)
T 1sjj_A 119 --------ETSA------KEGLLLWYQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTA 184 (863)
T ss_dssp --------CCCS------TTTTHHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHTTCCSSSCSGGGGSCCCGGGCTHH
T ss_pred --------ccch------HHHHHHHHHHhccCCCCCCCCCCccccccHHHHHHHHHHhCCCCcChhhCCCCCHHHHHHHH
Confidence 0112 467999999999865 78999999999999777765 333211 1 1234678999999
Q ss_pred HHHHHH-cCCCCCCCCChhhhcc
Q psy2679 406 FQLMQD-VGLAKPKARPEDEFAK 427 (526)
Q Consensus 406 LELLqd-~GL~k~~IspeDIvag 427 (526)
|+..++ .|+ .+-+.|+|+++.
T Consensus 185 ~~~a~~~lg~-~~~l~~ed~~~~ 206 (863)
T 1sjj_A 185 FDVAEKYLDI-PKMLDAEDIVGT 206 (863)
T ss_dssp HHHHHHHHCC-CCSCCHHHHTTC
T ss_pred HHHHHHhCCC-CCccCHHHHhCC
Confidence 999997 799 567999999875
No 12
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=99.71 E-value=8.5e-18 Score=164.32 Aligned_cols=96 Identities=14% Similarity=0.250 Sum_probs=85.7
Q ss_pred hcCCChhHHHHHHHHHHHHHHhhcccCcccccccccccccceee---------ec-cccccCCCChhhhHhcHHHHHHHH
Q psy2679 340 FDHHPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFV---------PL-HDFYLTPQTFEQKVHNVAFAFQLM 409 (526)
Q Consensus 340 f~~~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFI---------pL-~~f~LtP~~~~qKLhNVslALELL 409 (526)
...+|++..+|||||++|||+||.+.+..|+||++||+||..++ .+ .+++.+|.++.||++||+.|++++
T Consensus 38 ~~~d~~w~~vQkktft~WiN~~L~~~~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l~~~~~~~p~~r~~kleNv~~aL~~l 117 (272)
T 3hoc_A 38 LAEDAPWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFL 117 (272)
T ss_dssp ----CGGGGHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTSCCSSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred hhhChhHHHHHHHHHHHHHHHHhccCCCCcccHHHHHhhHHHHHHHHHHHcCCccccccCCCCccHHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999994444 22 677888999999999999999999
Q ss_pred HHcCCCCCCCCChhhhcccchhhhhH
Q psy2679 410 QDVGLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 410 qd~GL~k~~IspeDIvagdaKLtlki 435 (526)
++.|+...+|+++||++|+.|+|+++
T Consensus 118 k~~gv~lvnI~~~DIvdGn~kliLgL 143 (272)
T 3hoc_A 118 DRESIKLVSIDSKAIVDGNLKLILGL 143 (272)
T ss_dssp HHTTCCCSSCCHHHHHTTCHHHHHHH
T ss_pred HHcCCcccccccchhhcCCHHHHHHH
Confidence 99999999999999999999999987
No 13
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.71 E-value=6.7e-17 Score=155.14 Aligned_cols=200 Identities=19% Similarity=0.294 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCCC
Q psy2679 90 QELIFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWS 169 (526)
Q Consensus 90 ~el~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~~ 169 (526)
..-.+.+..|||+.|.+...-|.||++||.||.+|.+|+|+|.+.+++-+.-..+.-.+.+++..+|+++.+ .|+.-
T Consensus 26 ~~q~~~f~~WiN~~L~~~~~~v~~l~~dl~DGv~L~~Lle~l~~~~v~k~~~~~~~~~~~eNi~~aL~~~k~-~gv~l-- 102 (254)
T 1wku_A 26 KQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHKIANVNKALDFIAS-KGVKL-- 102 (254)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCSCCCCCCSCCSHHHHHHHHHHHHHHHHT-TTCCC--
T ss_pred HHHHHHHHHHHHHHccccCCCccCHHHHccCHHHHHHHHHHhCcCCCCCCCCCccHHHHHHhHHHHHHHHHH-cCCCc--
Confidence 344678999999999998888999999999999999999999999887764333445566777777887753 34332
Q ss_pred CCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccCCCCCCCCeEEEEEEEEec
Q psy2679 170 NTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRAPVRLPENVSVGVVVVQLD 249 (526)
Q Consensus 170 ~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv~v~vv~~~~~ 249 (526)
.....++|+++|...||.|+-.|.++|+..- + .
T Consensus 103 ---------------------------------v~I~~~DIvdG~~kliLgLlW~li~~~~i~~-----i-------~-- 135 (254)
T 1wku_A 103 ---------------------------------VSIGAEEIVDGNLKMTLGMIWTIILRFAIQD-----I-------S-- 135 (254)
T ss_dssp ---------------------------------CSCCHHHHHHCCHHHHHHHHHHHHHHHHTTT-----C-------E--
T ss_pred ---------------------------------cCCCHHHHhccchHHHHHHHHHHHHHHhhcc-----c-------c--
Confidence 2346899999999999999999999998320 0 0
Q ss_pred cccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEEEeeecccccccCC
Q psy2679 250 VPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTIKEEITSTYDDLGM 329 (526)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~e~it~~~~~~~~ 329 (526)
. |
T Consensus 136 ---------------------------------------------------------~----------~----------- 137 (254)
T 1wku_A 136 ---------------------------------------------------------V----------E----------- 137 (254)
T ss_dssp ---------------------------------------------------------E----------T-----------
T ss_pred ---------------------------------------------------------c----------c-----------
Confidence 0 0
Q ss_pred ccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhccc-Ccccccccccccccceeeec-ccccc-----CCCChhhhHhcH
Q psy2679 330 RCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYL-----TPQTFEQKVHNV 402 (526)
Q Consensus 330 ~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~L-----tP~~~~qKLhNV 402 (526)
+ -..++.+++|||.+++.. |++|+|+.++|+||..|..| +.|.. ..-....+.+|.
T Consensus 138 ----------------~-~~~~~~LL~W~~~~~~~y~~v~v~nFs~s~~DG~a~~aLi~~~~P~~id~~~l~~~~~~~n~ 200 (254)
T 1wku_A 138 ----------------E-TSAKEGLLLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDPIGNL 200 (254)
T ss_dssp ----------------T-EEHHHHHHHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHHHHHCTTSCCGGGCCTTCHHHHH
T ss_pred ----------------c-ccHHHHHHHHHHHHccCCCCCcCCCCccchhhHHHHHHHHHHHCCCcccccccCcCCHHHHH
Confidence 0 024679999999999865 78999999999999777754 22221 111345788999
Q ss_pred HHHHHHHHH-cCCCCCCCCChhhhcc---cchhhhhH
Q psy2679 403 AFAFQLMQD-VGLAKPKARPEDEFAK---HARLSRKI 435 (526)
Q Consensus 403 slALELLqd-~GL~k~~IspeDIvag---daKLtlki 435 (526)
..||+..++ .|+. +-+.|+|++++ |.|+..-.
T Consensus 201 ~~a~~~A~~~lGi~-~~l~peDiv~~~~pD~k~imty 236 (254)
T 1wku_A 201 NTAFEVAEKYLDIP-KMLDAEDIVNTPKPDEKAIMTY 236 (254)
T ss_dssp HHHHHHHHHHSCCC-CCSCHHHHHHSSSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCC-CcCCHHHHhccCCCcHHHHHHH
Confidence 999999997 7996 47999999886 66776543
No 14
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1.3e-17 Score=145.59 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=87.9
Q ss_pred hhhcCCChhHHHHHHHHHHHHHHhhcccCcc--cccccccccccceee---------eccccccCCCChhhhHhcHHHHH
Q psy2679 338 TLFDHHPDKLQVVKKSLITFVNKHLAKVNLE--VTDLDTQFHDGGFFV---------PLHDFYLTPQTFEQKVHNVAFAF 406 (526)
Q Consensus 338 ~lf~~~PeKl~vVKkTf~~FVNkHL~KlnL~--VtDLetqFaDGgyFI---------pL~~f~LtP~~~~qKLhNVslAL 406 (526)
..=.+.|++...++++|++|||+||.+.+++ |+||++||+||..++ ++.+++.+|.++.+|++||+.|+
T Consensus 7 ~~~~~~~~~~~~q~~~f~~WIN~~L~~~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~~~~~~p~~~~~~~eNv~~aL 86 (129)
T 2yrn_A 7 GKRKPVIHGLEDQKRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKIEDINGCPKNRSQMIENIDACL 86 (129)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHHTCCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCTTCCSSCCSTTHHHHHHHHHH
T ss_pred chhcccchhhHHHHHHHHHHHHHHhcccCCCccchhHHHHcccHHHHHHHHHHHhcCCcccccCCCCcHHHHHHHHHHHH
Confidence 3344689999999999999999999999875 999999999995555 24567788999999999999999
Q ss_pred HHHHHcCCCCCCCCChhhhcccchhhhhH
Q psy2679 407 QLMQDVGLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 407 ELLqd~GL~k~~IspeDIvagdaKLtlki 435 (526)
+++++.|+...+|+++||++|+.|+++++
T Consensus 87 ~~~~~~gv~~~~i~~~DI~dgn~~~iL~L 115 (129)
T 2yrn_A 87 NFLAAKGINIQGLSAEEIRNGNLKAILGL 115 (129)
T ss_dssp HHHHHHTCCCTTCCHHHHHHTCHHHHHHH
T ss_pred HHHHHhCCcccCCChhhhhcCCHhHHHHH
Confidence 99999999999999999999999999887
No 15
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.69 E-value=2.2e-16 Score=163.65 Aligned_cols=209 Identities=19% Similarity=0.283 Sum_probs=148.6
Q ss_pred CCccHHHHHHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecC----hHHHHHHHHHHHHHHH
Q psy2679 85 DDPKLQELIFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQS----EEGQKQKLAIVLEAVN 160 (526)
Q Consensus 85 ~dpk~~el~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s----~~~qkqkl~~vl~~v~ 160 (526)
+|.....=.+++..|||+.+. +..|.||.+||+||++|.+|+|+|.|.+++...+..+ .-.+.+++..+|+++.
T Consensus 270 ~~~~~~~q~ktf~~WiN~~~~--~~~v~dl~~Dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~r~~~leNv~~aL~~~k 347 (506)
T 1pxy_A 270 EDVETCRDERCYRLWINSLGI--DSYVNNVFEDVRNGWILLEVLDKVSPSSVNWKHASKPPIKMPFRKVENCNQVIKIGK 347 (506)
T ss_dssp -CCHHHHHHHHHHHHHTTTTC--SSCCSCHHHHTTTSHHHHHHHHHHSTTCCCGGGCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhcCC--CCCcccHHHHHHhHHHHHHHHHHHcCCccccccccCCccccHHHHHHHHHHHHHHHH
Confidence 445555556789999999985 4789999999999999999999999999988777654 2234455556666554
Q ss_pred HHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccCCCCCCCCeE
Q psy2679 161 KALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRAPVRLPENVS 240 (526)
Q Consensus 161 ~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv~ 240 (526)
..|+.- .....++|+++|...||+|+..|. ||+-
T Consensus 348 -~~~v~l-----------------------------------~~I~~~dIvdg~~kl~L~Liw~li-r~~i--------- 381 (506)
T 1pxy_A 348 -QLKFSL-----------------------------------VNVAGNDIVQGNKKLILGLLWQLM-RFHM--------- 381 (506)
T ss_dssp -HTTCCC-----------------------------------CSCCHHHHHTTCHHHHHHHHHHHH-HHHH---------
T ss_pred -HcCCcc-----------------------------------cCCCHHHHhcCCHHHHHHHHHHHH-HHhh---------
Confidence 223221 123468899999999999999997 7760
Q ss_pred EEEEEEEeccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEEEeee
Q psy2679 241 VGVVVVQLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTIKEEI 320 (526)
Q Consensus 241 v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~e~i 320 (526)
. .++ ..++...
T Consensus 382 ------~-----------------~~~-----------------------------------~~l~~~~----------- 392 (506)
T 1pxy_A 382 ------L-----------------QLL-----------------------------------KSLRSRT----------- 392 (506)
T ss_dssp ------H-----------------HHH-----------------------------------HTTCC-------------
T ss_pred ------H-----------------HHH-----------------------------------HHhhccc-----------
Confidence 0 000 0001000
Q ss_pred cccccccCCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhccc--Cccccccc-ccccccceeeec--------cccc
Q psy2679 321 TSTYDDLGMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKV--NLEVTDLD-TQFHDGGFFVPL--------HDFY 389 (526)
Q Consensus 321 t~~~~~~~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~Kl--nL~VtDLe-tqFaDGgyFIpL--------~~f~ 389 (526)
. | ++ +.++.+++|||+|+.+. |.+|+|.. ++|+||.+|+.| ..|.
T Consensus 393 ----~--~----~~--------------~~~~~LL~W~~~~~~~~~~~~~i~nF~d~s~~dG~a~~aLi~~~~P~li~~~ 448 (506)
T 1pxy_A 393 ----L--G----KE--------------MTDADILSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWN 448 (506)
T ss_dssp -------------C--------------CCHHHHHHHHHHHHHTTTCCCCCSSTTCGGGGGCHHHHHHHHHHCGGGCCTT
T ss_pred ----c--c----cc--------------ccHHHHHHHHHHHhhhcCCccccCCCCcccccchHHHHHHHHhhCCCeeehh
Confidence 0 0 00 12468999999999975 68999997 999999766643 2343
Q ss_pred -cCCC-ChhhhHhcHHHHHHHHHHcCCCCCCCCChhhhcccchhhhhH
Q psy2679 390 -LTPQ-TFEQKVHNVAFAFQLMQDVGLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 390 -LtP~-~~~qKLhNVslALELLqd~GL~k~~IspeDIvagdaKLtlki 435 (526)
++|. +.+.+.+|..+||+..++.|+ .+-+.|+|++..|.|++.-.
T Consensus 449 ~l~~~~s~~~~~~N~~~a~~~a~~lGi-~~~l~peDi~~~d~ksi~ty 495 (506)
T 1pxy_A 449 LVTKGETDDEKRLNATYIVSVARKLGC-SVFLLPEDIVEVNQKMILIL 495 (506)
T ss_dssp SCCCSCSHHHHHHHHHHHHHHHHHHTC-CCCCCHHHHHTTCHHHHHHH
T ss_pred hcccCCCchhHHHHHHHHHHHHHHcCC-CCcCCHHHccCCChhHHHHH
Confidence 4453 456789999999999999999 66899999999988877543
No 16
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=99.67 E-value=4.6e-17 Score=163.01 Aligned_cols=93 Identities=16% Similarity=0.289 Sum_probs=84.3
Q ss_pred CChhHHHHHHHHHHHHHHhhcccCcccccccccccccceeeec----------cccccCCCChhhhHhcHHHHHHHHHHc
Q psy2679 343 HPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPL----------HDFYLTPQTFEQKVHNVAFAFQLMQDV 412 (526)
Q Consensus 343 ~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL----------~~f~LtP~~~~qKLhNVslALELLqd~ 412 (526)
.++...+||||||+|||+||++.|..|+||++||+||..++.| ..|+.+|.++.||++||+.|++++++.
T Consensus 11 d~~we~iQ~ktFt~WiN~~L~~~~~~V~dL~~Dl~DG~~L~~Lle~ls~~~l~~~~~~~p~~r~~k~eNv~~al~~~~~~ 90 (347)
T 4b7l_A 11 DAPWKKIQQNTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRE 90 (347)
T ss_dssp --CHHHHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHhhCcCCCCcCCHHHHhcCHHHHHHHHHHHcCCccChhhcCCcccHHHHHHHHHHHHHHHHHh
Confidence 4677889999999999999999999999999999999555522 357889999999999999999999999
Q ss_pred CCCCCCCCChhhhcccchhhhhH
Q psy2679 413 GLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 413 GL~k~~IspeDIvagdaKLtlki 435 (526)
|+...+|+++||++|+.|+|+++
T Consensus 91 g~~lv~i~~~DIvdGn~~liLgL 113 (347)
T 4b7l_A 91 SIKLVSIDSKAIVDGNLKLILGL 113 (347)
T ss_dssp TCCCSSCCHHHHHTTCHHHHHHH
T ss_pred ccccCCCCcchhhcCCHhhHHHH
Confidence 99999999999999999999987
No 17
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.62 E-value=3.3e-15 Score=155.38 Aligned_cols=198 Identities=20% Similarity=0.267 Sum_probs=141.0
Q ss_pred HHHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecC-h-------HHHHHHHHHHHHHHHHHc
Q psy2679 92 LIFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQS-E-------EGQKQKLAIVLEAVNKAL 163 (526)
Q Consensus 92 l~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s-~-------~~qkqkl~~vl~~v~~~l 163 (526)
-.+++..|||+... +..|.||++||+||++|.+|+|++...+++.+.+..+ + -.+.+++..+|+++. ..
T Consensus 286 q~k~f~~WiN~~~~--~~~v~~l~~DL~DG~~L~~Lle~l~~g~v~~~~~~~~p~~~~~~~r~~~~eNv~~al~~~~-~~ 362 (513)
T 1rt8_A 286 EARVFTLWLNSLDV--TPSIHDFFNNLRDGLILLQAYDKITPNTVNWKKVNKAPASGDEMMRFKAVENCNYAVDLGK-NQ 362 (513)
T ss_dssp HHHHHHHHHHHTTC--SSCCSCHHHHTTTSHHHHHHHHHHSTTCCCGGGSCCCCTTSCCCCHHHHHHHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHhcCC--CCCccCHHHHHhhHHHHHHHHHHhCCCCcchhhhcCCcccccccchHHHHHHHHHHHHHHH-Hc
Confidence 34689999999854 4579999999999999999999887666777777653 2 334555566666554 22
Q ss_pred CCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccCCCCCCCCeEEEE
Q psy2679 164 GLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRAPVRLPENVSVGV 243 (526)
Q Consensus 164 ~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~~~~lp~nv~v~v 243 (526)
|+.- .....++|+++|...||+||..|.+||.
T Consensus 363 gv~l-----------------------------------v~i~~~DIvdg~~~~~LgLlW~li~~~~------------- 394 (513)
T 1rt8_A 363 GFSL-----------------------------------VGIQGADITDGSRTLTLALVWQMMRMNI------------- 394 (513)
T ss_dssp TCCC-----------------------------------TTCCHHHHHTTCHHHHHHHHHHHHHHHH-------------
T ss_pred Ccee-----------------------------------eccchhhhhcCCchhhHHHHHHHHHHHH-------------
Confidence 3221 2245789999999999999999998873
Q ss_pred EEEEeccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCccchhhcccccchhhhhhhhhhccCCcceeeEEEeeeccc
Q psy2679 244 VVVQLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLKKEGSLSHRTIKEEITST 323 (526)
Q Consensus 244 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~e~it~~ 323 (526)
++ . + . .+..+| |
T Consensus 395 --~~---------------~----l-------------------~---------------~l~~~~--------~----- 406 (513)
T 1rt8_A 395 --TK---------------T----L-------------------H---------------SLSRGG--------K----- 406 (513)
T ss_dssp --HH---------------H----T-------------------T---------------C-------------------
T ss_pred --HH---------------H----H-------------------H---------------hhccCC--------C-----
Confidence 00 0 0 0 000011 0
Q ss_pred ccccCCccCCChhhhhhcCCChhHHHHHHHHHHHHHHhhccc--Cccccccc-ccccccceeeec--------ccccc-C
Q psy2679 324 YDDLGMRCERDAFDTLFDHHPDKLQVVKKSLITFVNKHLAKV--NLEVTDLD-TQFHDGGFFVPL--------HDFYL-T 391 (526)
Q Consensus 324 ~~~~~~~~~~d~fd~lf~~~PeKl~vVKkTf~~FVNkHL~Kl--nL~VtDLe-tqFaDGgyFIpL--------~~f~L-t 391 (526)
. +..+.+++|||+|+.+- |.+|+|.. ++|+||.+|+.| -.|.. +
T Consensus 407 --~----------------------~~~~~LL~W~~~~~~~~~~~~~i~nF~~~s~~dG~a~~aLi~~~~P~~i~~~~l~ 462 (513)
T 1rt8_A 407 --T----------------------LSDSDMVAWANSMAAKGGKGSQIRSFRDPSISTGVFVLDVLHGIKSEYVDYNLVT 462 (513)
T ss_dssp --C----------------------CCHHHHHHHHHHHHTTTCSSCCCSSTTCGGGGGSHHHHHHHHHHCGGGCCGGGCC
T ss_pred --c----------------------CCHHHHHHHHHHHhhccCCCCCCCCCCcccccchHHHHHHHHHhCCCcCCHHhhc
Confidence 0 11246999999999975 68999999 899999777643 22332 3
Q ss_pred CC-ChhhhHhcHHHHHHHHHHcCCCCCCCCChhhhcccchhhh
Q psy2679 392 PQ-TFEQKVHNVAFAFQLMQDVGLAKPKARPEDEFAKHARLSR 433 (526)
Q Consensus 392 P~-~~~qKLhNVslALELLqd~GL~k~~IspeDIvagdaKLtl 433 (526)
|. +.+.+.+|+..||+..++.|+. +-+.|+|+++.+.|+++
T Consensus 463 ~~~~~~~~~~n~~~af~~A~~lGi~-~~l~peDi~~~~pksi~ 504 (513)
T 1rt8_A 463 DGSTEELAIQNARLAISIARKLGAV-IFILPEDIVAVRPRLVL 504 (513)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTTCC-CCCCHHHHHTTCHHHHH
T ss_pred cccChhhHHHHHHHHHHHHHHcCCC-ccCCHHHhcCCCcccHH
Confidence 43 4568999999999999999995 78899999999876553
No 18
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=4.1e-15 Score=129.89 Aligned_cols=109 Identities=25% Similarity=0.396 Sum_probs=87.7
Q ss_pred CCccHHHHHHHHHHHHhhhhccccc--cccchhhhhhhhHHHHHHHHHHccCcccccceecCh---HHHHHHHHHHHHHH
Q psy2679 85 DDPKLQELIFVLIEWINDELADQRI--IVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSE---EGQKQKLAIVLEAV 159 (526)
Q Consensus 85 ~dpk~~el~~~li~WiN~~L~~~ri--iVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~---~~qkqkl~~vl~~v 159 (526)
.+.+..+-.+++++|||+.|.+.++ .|.||++||+||++|.+|+|+|.+.+++ .+..+. ..+.+++..+|+++
T Consensus 12 ~~~~~~~q~~~f~~WIN~~L~~~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~--~~~~~p~~~~~~~eNv~~aL~~~ 89 (129)
T 2yrn_A 12 VIHGLEDQKRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKIE--DINGCPKNRSQMIENIDACLNFL 89 (129)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCT--TCCSSCCSTTHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhcccCCCccchhHHHHcccHHHHHHHHHHHhcCCcc--cccCCCCcHHHHHHHHHHHHHHH
Confidence 4566777888999999999998875 6899999999999999999999999886 454433 34455666666666
Q ss_pred HHHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccC
Q psy2679 160 NKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRA 231 (526)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~ 231 (526)
. ..|+.- ..|++++|+++|+..||+||.+|.+||++
T Consensus 90 ~-~~gv~~-----------------------------------~~i~~~DI~dgn~~~iL~Llw~L~r~~q~ 125 (129)
T 2yrn_A 90 A-AKGINI-----------------------------------QGLSAEEIRNGNLKAILGLFFSLSRYKQQ 125 (129)
T ss_dssp H-HHTCCC-----------------------------------TTCCHHHHHHTCHHHHHHHHHHHHHHHSS
T ss_pred H-HhCCcc-----------------------------------cCCChhhhhcCCHhHHHHHHHHHHHHHhh
Confidence 3 345443 35679999999999999999999999986
No 19
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.57 E-value=2.8e-15 Score=148.34 Aligned_cols=99 Identities=21% Similarity=0.296 Sum_probs=85.7
Q ss_pred hhhhcCCChhHHHHHHHHHHHHHHhhcccCcccccccccccccceeeeccc-------cccCCCChhhhHhcHHHHHHHH
Q psy2679 337 DTLFDHHPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPLHD-------FYLTPQTFEQKVHNVAFAFQLM 409 (526)
Q Consensus 337 d~lf~~~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL~~-------f~LtP~~~~qKLhNVslALELL 409 (526)
..+...+.|+..+||+||++|+|+||.+.+..|+||++||+||..++-|.+ -..+|.++.+|++||+.|++++
T Consensus 61 ~~~~~~~~e~~~vQkktft~WINs~L~~~~~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~~~~~~r~~kleNvn~aL~~l 140 (296)
T 3f7p_A 61 RAVIRIADERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMRFHKLQNVQIALDYL 140 (296)
T ss_dssp --CEECCCHHHHHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCCCCSSHHHHHHHHHHHHHHH
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHHcccCCCCcccHHHHHhhHHHHHHHHHHhcCCcccccCCcChhhhhhhHHHHHHHH
Confidence 345567999999999999999999999999999999999999955553211 0135778999999999999999
Q ss_pred HHcCCCCCCCCChhhhcccchhhhhH
Q psy2679 410 QDVGLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 410 qd~GL~k~~IspeDIvagdaKLtlki 435 (526)
++.|+...+|+++||++|+.|+|+++
T Consensus 141 k~~gv~lv~I~~~DIvdGn~kliLgL 166 (296)
T 3f7p_A 141 RHRQVKLVNIRNDDIADGNPKLTLGL 166 (296)
T ss_dssp HHTTCCCTTCCHHHHHTTCHHHHHHH
T ss_pred HHhCccccCCChhhhhccchHHHHHH
Confidence 99999999999999999999999987
No 20
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=99.56 E-value=4.8e-15 Score=141.23 Aligned_cols=93 Identities=15% Similarity=0.274 Sum_probs=83.8
Q ss_pred CChhHHHHHHHHHHHHHHhhcccCcccccccccccccceeee---------c-cccccCCCChhhhHhcHHHHHHHHHHc
Q psy2679 343 HPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVP---------L-HDFYLTPQTFEQKVHNVAFAFQLMQDV 412 (526)
Q Consensus 343 ~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIp---------L-~~f~LtP~~~~qKLhNVslALELLqd~ 412 (526)
.++...+||++|++|+|+||.+.+..|+||++||+||..++. + .+++.+|.++.+|++|++.|++++++.
T Consensus 14 ~~~~~~~q~~~f~~WiN~~L~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~~~~~~n~~~~~~~~~~eNv~~aL~~~k~~ 93 (245)
T 2wa7_A 14 DAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRE 93 (245)
T ss_dssp -CGGGGHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHhccccCCCccCHHHHcccHHHHHHHHHHHcCCCCchhcCCCCCcHHHHHHHHHHHHHHHHHc
Confidence 456678999999999999999999999999999999955442 2 567778899999999999999999999
Q ss_pred CCCCCCCCChhhhcccchhhhhH
Q psy2679 413 GLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 413 GL~k~~IspeDIvagdaKLtlki 435 (526)
|+...+|+++||++|+.|+|+++
T Consensus 94 g~~lv~I~~~DIvdG~~kliLgL 116 (245)
T 2wa7_A 94 SIKLVSIDSKAIVDGNLKLILGL 116 (245)
T ss_dssp TCCCCSCCHHHHHTTCHHHHHHH
T ss_pred CCcccCCCHHHhhCCCHHHHHHH
Confidence 99999999999999999999986
No 21
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.50 E-value=1.2e-14 Score=139.48 Aligned_cols=96 Identities=19% Similarity=0.276 Sum_probs=79.1
Q ss_pred hhhhcCCChhHHHHHHHHHHHHHHhhcccCcccccccccccccceeeec---------cccccCCCChhhhHhcHHHHHH
Q psy2679 337 DTLFDHHPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPL---------HDFYLTPQTFEQKVHNVAFAFQ 407 (526)
Q Consensus 337 d~lf~~~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL---------~~f~LtP~~~~qKLhNVslALE 407 (526)
|++|+...|+ .++++|++|+|+||.+.+..|+||++||+||..++.| ..+ .+|.++.+|++|++.|++
T Consensus 17 ~~~~~~~~~~--~q~~~f~~WiN~~L~~~~~~v~~l~~dl~DGv~L~~Lle~l~~~~v~k~-~~~~~~~~~~eNi~~aL~ 93 (254)
T 1wku_A 17 DLLLDPAWEK--QQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRP-DKGKMRFHKIANVNKALD 93 (254)
T ss_dssp ------CHHH--HHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCSCCCCC-CSCCSHHHHHHHHHHHHH
T ss_pred hhhhhccchH--HHHHHHHHHHHHHccccCCCccCHHHHccCHHHHHHHHHHhCcCCCCCC-CCCccHHHHHHhHHHHHH
Confidence 7888765554 7899999999999999999999999999999555422 222 356789999999999999
Q ss_pred HHHHcCCCCCCCCChhhhcccchhhhhH
Q psy2679 408 LMQDVGLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 408 LLqd~GL~k~~IspeDIvagdaKLtlki 435 (526)
++++.|+...+|+++||++|+.|+|+++
T Consensus 94 ~~k~~gv~lv~I~~~DIvdG~~kliLgL 121 (254)
T 1wku_A 94 FIASKGVKLVSIGAEEIVDGNLKMTLGM 121 (254)
T ss_dssp HHHTTTCCCCSCCHHHHHHCCHHHHHHH
T ss_pred HHHHcCCCccCCCHHHHhccchHHHHHH
Confidence 9999999999999999999999999986
No 22
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.50 E-value=2.9e-14 Score=135.23 Aligned_cols=93 Identities=23% Similarity=0.315 Sum_probs=81.8
Q ss_pred CChhHHHHHHHHHHHHHHhhcc-----cCcccccccccccccceeeeccc-------cccCCCChhhhHhcHHHHHHHHH
Q psy2679 343 HPDKLQVVKKSLITFVNKHLAK-----VNLEVTDLDTQFHDGGFFVPLHD-------FYLTPQTFEQKVHNVAFAFQLMQ 410 (526)
Q Consensus 343 ~PeKl~vVKkTf~~FVNkHL~K-----lnL~VtDLetqFaDGgyFIpL~~-------f~LtP~~~~qKLhNVslALELLq 410 (526)
.+++..+++++|++|+|+||.+ .+..|+||++||+||..++.|.+ -..+|.++.+|++|++.|+++++
T Consensus 6 ~~e~~~~q~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~eNv~~aL~~~k 85 (245)
T 1sh5_A 6 FDERDRVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMRFHKLQNVQIALDYLR 85 (245)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCCCCCSHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCccccCCCCcchHHHHHhHHHHHHHHH
Confidence 5688999999999999999999 88999999999999955543211 02457789999999999999999
Q ss_pred HcCCCCCCCCChhhhcccchhhhhH
Q psy2679 411 DVGLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 411 d~GL~k~~IspeDIvagdaKLtlki 435 (526)
+.|+...+|+++||++|+.|+|+++
T Consensus 86 ~~g~~l~~I~~~DIvdg~~k~iLgL 110 (245)
T 1sh5_A 86 HRQVKLVNIRNDDIADGNPKLTLGL 110 (245)
T ss_dssp HTTCCCCSCCHHHHHTTCHHHHHHH
T ss_pred HcCCcccCCChHhhhcccHHHHHHH
Confidence 9999999999999999999999986
No 23
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=99.45 E-value=9.3e-14 Score=132.27 Aligned_cols=93 Identities=18% Similarity=0.248 Sum_probs=80.8
Q ss_pred CChhHHHHHHHHHHHHHHhhcccCc-ccccccccccccceeeeccc----c---ccCCCChhhhHhcHHHHHHHHHHcCC
Q psy2679 343 HPDKLQVVKKSLITFVNKHLAKVNL-EVTDLDTQFHDGGFFVPLHD----F---YLTPQTFEQKVHNVAFAFQLMQDVGL 414 (526)
Q Consensus 343 ~PeKl~vVKkTf~~FVNkHL~KlnL-~VtDLetqFaDGgyFIpL~~----f---~LtP~~~~qKLhNVslALELLqd~GL 414 (526)
..++..+++++|++|+|+||.+.+. .|+||++||+||..++.|.+ . ..+|.++.++++|++.|++++++.|+
T Consensus 10 ~~e~~~~q~~~f~~WiN~~L~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~eNv~~aL~~~k~~g~ 89 (246)
T 1dxx_A 10 SYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNV 89 (246)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTCCCCSCTTTTTTTSHHHHHHHHHHHSCCCCCCCCSSHHHHHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHHHHhccccCCCCccCHHHHhCcHHHHHHHHHHHcCCcCCCCCCccHHHHHHHHHHHHHHHHHcCC
Confidence 4688999999999999999999885 79999999999955543211 0 13577899999999999999999999
Q ss_pred CCCCCCChhhhcccchhhhhH
Q psy2679 415 AKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 415 ~k~~IspeDIvagdaKLtlki 435 (526)
...+|+++||++|+.|+|+++
T Consensus 90 ~l~~I~~~DIvdg~~~liL~L 110 (246)
T 1dxx_A 90 DLVNIGSTDIVDGNHKLTLGL 110 (246)
T ss_dssp CCTTCCHHHHHTTCHHHHHHH
T ss_pred ccccCCHHHhhcccHHHHHHH
Confidence 999999999999999999886
No 24
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.32 E-value=1.5e-12 Score=139.53 Aligned_cols=92 Identities=17% Similarity=0.284 Sum_probs=81.6
Q ss_pred CChhHHHHHHHHHHHHHHhhcccCcccccccccccccceeeec---------cccccCCCChhhhHhcHHHHHHHHHHcC
Q psy2679 343 HPDKLQVVKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPL---------HDFYLTPQTFEQKVHNVAFAFQLMQDVG 413 (526)
Q Consensus 343 ~PeKl~vVKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL---------~~f~LtP~~~~qKLhNVslALELLqd~G 413 (526)
.+....++|+||++|||+||.+.++.|+||++||+||..++.| .. ..+|.++.+|++||+.|++++++.|
T Consensus 2 ~~~~~~~q~~~f~~Win~~L~~~~~~v~~l~~dl~DG~~L~~l~e~l~~~~~~~-~~~~~~~~~~~eN~~~~l~~~~~~g 80 (863)
T 1sjj_A 2 DPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAK-PERGKMRVHKISNVNKALDFIASKG 80 (863)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHCSCCCCCSSTTSSCHHHHHHHHHTSCCCCCC-SCCCSSHHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCccCHHHHhcCHHHHHHHHHHhCCCceeC-CCCCccHHHHHHHHHHHHHHHHHcC
Confidence 4567789999999999999999999999999999999555532 22 2346789999999999999999999
Q ss_pred CCCCCCCChhhhcccchhhhhH
Q psy2679 414 LAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 414 L~k~~IspeDIvagdaKLtlki 435 (526)
+..++|+++||++|+.|+|+++
T Consensus 81 ~~~~~i~~~di~~g~~~~~l~l 102 (863)
T 1sjj_A 81 VKLVSIGAEEIVDGNVKMTLGM 102 (863)
T ss_dssp CCCTTCCSHHHHTTCHHHHHHH
T ss_pred CccCCCChHHhhcCCHHHHHHH
Confidence 9999999999999999999997
No 25
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=99.32 E-value=1.3e-12 Score=126.10 Aligned_cols=87 Identities=20% Similarity=0.137 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHhhccc---------Ccccccccccccccceeee-----------ccccccCCCChhhhHhcHHHHHHH
Q psy2679 349 VVKKSLITFVNKHLAKV---------NLEVTDLDTQFHDGGFFVP-----------LHDFYLTPQTFEQKVHNVAFAFQL 408 (526)
Q Consensus 349 vVKkTf~~FVNkHL~Kl---------nL~VtDLetqFaDGgyFIp-----------L~~f~LtP~~~~qKLhNVslALEL 408 (526)
.++++|++|+|+||.+- +..|+||++||+||..++. ...++..|.++.++++||+.|+++
T Consensus 24 ~q~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~~~~i~~~~~~~~~~~eNv~~aL~~ 103 (275)
T 1aoa_A 24 EEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALNS 103 (275)
T ss_dssp HHHHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSCGGGSCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCCccccCCCCCCHHHHHHHHHHHHHH
Confidence 78999999999999873 4578999999999955443 234455566788999999999999
Q ss_pred HHHcCCCCCCCCChhhhcccchhhhhH
Q psy2679 409 MQDVGLAKPKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 409 Lqd~GL~k~~IspeDIvagdaKLtlki 435 (526)
+++.|+...+|+++||++|+.|+++++
T Consensus 104 ~k~~g~~l~~I~~~DIvdg~~~liLgL 130 (275)
T 1aoa_A 104 ASAIGCHVVNIGAEDLRAGKPHLVLGL 130 (275)
T ss_dssp HHHTTCCCTTCCHHHHHTTCHHHHHHH
T ss_pred HHHcCCcccCCCHHHHHcCcHHHHHHH
Confidence 999999999999999999999999985
No 26
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=99.00 E-value=1.3e-09 Score=96.34 Aligned_cols=105 Identities=24% Similarity=0.289 Sum_probs=84.6
Q ss_pred HHHHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCccccccee--c-ChHHHHHHHHHHHHHHHHHcCCCC
Q psy2679 91 ELIFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVT--Q-SEEGQKQKLAIVLEAVNKALGLPR 167 (526)
Q Consensus 91 el~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~--~-s~~~qkqkl~~vl~~v~~~l~~~~ 167 (526)
--.+++..|||+.|++.++-|.||.+||.||.+|-+|+|.|+|.+++...+. + +.....+++..+|+++.+ .|..-
T Consensus 22 ~q~ktft~WiN~~L~~~~~~v~dL~~Dl~DGv~L~~Lle~ls~~~~~~~~~~~~p~~r~~kieNv~~aL~~lk~-~gi~l 100 (131)
T 2vzc_A 22 VVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQD-GGLEK 100 (131)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCCCTTTTTTTSHHHHHHHHHHTTCCCCTTSSCSSCCSHHHHHHHHHHHHHHHHH-TTCCC
T ss_pred HHHHHHHHHHHHHHHHcCCcccCHHHHcccHHHHHHHHHHhcCCCCCHHHhcCCCCcHHHHHHHHHHHHHHHHH-cCCCc
Confidence 3367899999999999999999999999999999999999999988644332 2 334456777788888764 34322
Q ss_pred CCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhccC
Q psy2679 168 WSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFRA 231 (526)
Q Consensus 168 ~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~~ 231 (526)
...+.++|+++|...||-|+-.|-+||+.
T Consensus 101 -----------------------------------~~I~~~DIvdGn~kliLgLiW~li~~~~~ 129 (131)
T 2vzc_A 101 -----------------------------------PKPRPEDIVNCDLKSTLRVLYNLFTKYRN 129 (131)
T ss_dssp -----------------------------------CSSCHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------------CCCCHHHhhCCCHHhHHHHHHHHHHHHhc
Confidence 23458999999999999999999999985
No 27
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=98.67 E-value=1.2e-08 Score=90.74 Aligned_cols=84 Identities=17% Similarity=0.300 Sum_probs=71.2
Q ss_pred HHHHHHHHHHhhcccC--ccccccc-ccccccceeeecc--------ccc--cCCC-ChhhhHhcHHHHHHHHHHcCCCC
Q psy2679 351 KKSLITFVNKHLAKVN--LEVTDLD-TQFHDGGFFVPLH--------DFY--LTPQ-TFEQKVHNVAFAFQLMQDVGLAK 416 (526)
Q Consensus 351 KkTf~~FVNkHL~Kln--L~VtDLe-tqFaDGgyFIpL~--------~f~--LtP~-~~~qKLhNVslALELLqd~GL~k 416 (526)
.++|++|||+||++.| .+|+|.. ++++||.+|+.|. +|. ..+. +++++.+|.+.|++..++.|+..
T Consensus 9 d~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~ArklG~~~ 88 (124)
T 1wjo_A 9 DDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARV 88 (124)
T ss_dssp CHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 4899999999999877 4799998 9999998888542 343 2234 68899999999999999999975
Q ss_pred CCCCChhhhcccchhhhhH
Q psy2679 417 PKARPEDEFAKHARLSRKI 435 (526)
Q Consensus 417 ~~IspeDIvagdaKLtlki 435 (526)
-+.||||+.++.|+++.+
T Consensus 89 -~l~pEDIve~~pK~ilt~ 106 (124)
T 1wjo_A 89 -YALPEDLVEVKPKMVMTV 106 (124)
T ss_dssp -CCCHHHHHHTCTTTTTHH
T ss_pred -ccCHHHHhcCcchhhHHH
Confidence 899999999999988765
No 28
>3b2e_E Golgi to ER traffic protein 1; protein-protein interaction, receptor complex, hydrolase, TR protein, ADP binding, coild-coil; HET: ADP; 3.00A {Saccharomyces cerevisiae} PDB: 3zs8_C
Probab=98.02 E-value=5.3e-09 Score=88.18 Aligned_cols=59 Identities=10% Similarity=0.174 Sum_probs=52.9
Q ss_pred HHHHHHcCCCCCCCCChhhhcccchhhhhHHHHHHHHHHHhhHhhhhcccchhhhHHHH
Q psy2679 406 FQLMQDVGLAKPKARPEDEFAKHARLSRKISALQAQLEKECKLNAESCNKIKTMITSIL 464 (526)
Q Consensus 406 LELLqd~GL~k~~IspeDIvagdaKLtlkiDKL~eELEklnks~sa~kskfd~~it~a~ 464 (526)
...+.+..-+..+|+++|.|++|+||.|+|||+.+||+++++++++++++|+|.++.++
T Consensus 26 k~Ei~~lk~E~~stSaQDEFAKWAKL~Rk~dKl~~ele~~~k~l~~~k~~f~~~~~~v~ 84 (84)
T 3b2e_E 26 VKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQAHLHKLR 84 (84)
Confidence 44555566678999999999999999999999999999999999999999999998653
No 29
>3vlc_E Golgi to ER traffic protein 1; ATPase, membrane protein insertion, ATP binding, membrane PR binding; HET: ADP; 4.50A {Saccharomyces cerevisiae}
Probab=98.54 E-value=8.1e-09 Score=88.66 Aligned_cols=64 Identities=9% Similarity=0.139 Sum_probs=52.1
Q ss_pred cHHHHHHHHHHcCCCCCCCCChhhhcccchhhhhHHHHHHHHHHHhhHhhhhcccchhhhHHHH
Q psy2679 401 NVAFAFQLMQDVGLAKPKARPEDEFAKHARLSRKISALQAQLEKECKLNAESCNKIKTMITSIL 464 (526)
Q Consensus 401 NVslALELLqd~GL~k~~IspeDIvagdaKLtlkiDKL~eELEklnks~sa~kskfd~~it~a~ 464 (526)
........+.+..-++..|+++|.|++|+|+.|+|||+++||+++++++.+++++|++.++.++
T Consensus 31 ~~~~lk~E~~~lk~E~~stSaQDEFAKWAKL~Rk~DKl~~ele~l~~~L~s~ks~fd~~l~~vR 94 (94)
T 3vlc_E 31 KYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQAHLHKLR 94 (94)
T ss_dssp HHHHHHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHHHHHHTTTHHHHTTTTHHHHTTCC----
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3344455555555668899999999999999999999999999999999999999999998764
No 30
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=98.50 E-value=2.9e-08 Score=85.11 Aligned_cols=59 Identities=10% Similarity=0.184 Sum_probs=49.1
Q ss_pred HHHHHHHcCCCCCCCCChhhhcccchhhhhHHHHHHHHHHHhhHhhhhcccchhhhHHH
Q psy2679 405 AFQLMQDVGLAKPKARPEDEFAKHARLSRKISALQAQLEKECKLNAESCNKIKTMITSI 463 (526)
Q Consensus 405 ALELLqd~GL~k~~IspeDIvagdaKLtlkiDKL~eELEklnks~sa~kskfd~~it~a 463 (526)
....+.+..-+...|+++|.|++|+|+.|+|||+.+||+++++.+.+++++|++.++.+
T Consensus 28 lk~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~~F~~~~~~~ 86 (93)
T 3sjb_C 28 KVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQAHLHKL 86 (93)
T ss_dssp HHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555556889999999999999999999999999999999999999999998753
No 31
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=98.06 E-value=2.9e-06 Score=73.51 Aligned_cols=82 Identities=16% Similarity=0.255 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHhhccc-Ccccccccccccccceeeec-ccccc-----CCCChhhhHhcHHHHHHHHHH-cCCCCCCCCC
Q psy2679 350 VKKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYL-----TPQTFEQKVHNVAFAFQLMQD-VGLAKPKARP 421 (526)
Q Consensus 350 VKkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~L-----tP~~~~qKLhNVslALELLqd-~GL~k~~Isp 421 (526)
.|++|++|||.|++.- |++|+|.-++|+||..|..| +.|.. ..-......+|..+||+..++ .|+. +-++|
T Consensus 8 ~~~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~-~lL~p 86 (116)
T 1wyl_A 8 TQEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGIT-PVVSA 86 (116)
T ss_dssp SHHHHHHHHHHHHHHSTTCCCSCTTTTTTSSHHHHHHHHHHCTTSCCCSSGGGCCHHHHHHHHHHHHHHTTCCC-CCSCH
T ss_pred HHHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCCCCHHHhccCCHHHHHHHHHHHHHHHcCCc-cccCH
Confidence 3789999999999987 79999999999999777754 33321 111345678999999999997 8994 57899
Q ss_pred hhhhcc-cchhh
Q psy2679 422 EDEFAK-HARLS 432 (526)
Q Consensus 422 eDIvag-daKLt 432 (526)
+|++++ |.|+.
T Consensus 87 eD~~~~~d~ksv 98 (116)
T 1wyl_A 87 QAVVAGSDPLGL 98 (116)
T ss_dssp HHHHHTSCHHHH
T ss_pred HHHhcCCchhHH
Confidence 999987 55544
No 32
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=98.02 E-value=4.1e-06 Score=74.02 Aligned_cols=83 Identities=16% Similarity=0.293 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHhhccc-Ccccccccccccccceeeec-ccccc-----CCCChhhhHhcHHHHHHHHHH-cCCCCCCCCC
Q psy2679 350 VKKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYL-----TPQTFEQKVHNVAFAFQLMQD-VGLAKPKARP 421 (526)
Q Consensus 350 VKkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~L-----tP~~~~qKLhNVslALELLqd-~GL~k~~Isp 421 (526)
.|+.|++|||.|+..- |.+|+|.-++|+||..|..| +.|.. ..-......+|..+||+..++ .|+. +-++|
T Consensus 8 ~k~~LL~W~q~~~~~y~~v~V~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgip-~lL~p 86 (128)
T 2d87_A 8 IKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCP-QLLDT 86 (128)
T ss_dssp HHHHHHHHHHHHSSSCTTCCCSCTTTTTTSSHHHHHHHHHHCTTTSCSTTSCSSCHHHHHHHHHHHHHHHHCCC-CCSCH
T ss_pred HHHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCCHHHcCccCHHHHHHHHHHHHHHcCCCC-cccCH
Confidence 4789999999999987 79999999999999777754 33321 122345778999999999998 5885 45999
Q ss_pred hhhhccc---chhhh
Q psy2679 422 EDEFAKH---ARLSR 433 (526)
Q Consensus 422 eDIvagd---aKLtl 433 (526)
+|+++.+ .|+..
T Consensus 87 eD~v~~~~pD~ksvm 101 (128)
T 2d87_A 87 EDMVRLREPDWKCVY 101 (128)
T ss_dssp HHHHHSSSCCHHHHH
T ss_pred HHHhccCCccHHHHH
Confidence 9998764 56653
No 33
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.00 E-value=2.9e-06 Score=73.80 Aligned_cols=81 Identities=16% Similarity=0.267 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhhccc-Ccccccccccccccceeeec-cccccC-----CCChhhhHhcHHHHHHHHHHcCCCCCCCCChh
Q psy2679 351 KKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYLT-----PQTFEQKVHNVAFAFQLMQDVGLAKPKARPED 423 (526)
Q Consensus 351 KkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~Lt-----P~~~~qKLhNVslALELLqd~GL~k~~IspeD 423 (526)
|+.|++|||.|++.- |.+|+|.-++|+||..|..| +.|... .-......+|...||+..++.|+. +-+.|+|
T Consensus 11 ~~~LL~W~~~~~~~y~~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~~~~~~n~~~af~~a~~LGi~-~ll~peD 89 (119)
T 2d89_A 11 SQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIGIS-RLLEPSD 89 (119)
T ss_dssp HHHHHHHHHHHTTTCSSCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCTTCSHHHHHHHHHHHHHHTCC-CCSCHHH
T ss_pred HHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCChhhhcccCHHHHHHHHHHHHHHhCCC-cccCHHH
Confidence 789999999999987 79999999999999777754 333211 113456789999999998899995 5789999
Q ss_pred hhcc---cchhh
Q psy2679 424 EFAK---HARLS 432 (526)
Q Consensus 424 Ivag---daKLt 432 (526)
+++. |.|+.
T Consensus 90 i~~~~~pD~ksv 101 (119)
T 2d89_A 90 MVLLAIPDKLTV 101 (119)
T ss_dssp HHHSSSCCHHHH
T ss_pred HhccCCCcHHHH
Confidence 9975 66655
No 34
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=97.98 E-value=2.5e-06 Score=69.12 Aligned_cols=46 Identities=13% Similarity=0.195 Sum_probs=38.9
Q ss_pred HHHHHcCCCCCCCCChhhhcccchhhhhHHHHHHHHHHHhhHhhhh
Q psy2679 407 QLMQDVGLAKPKARPEDEFAKHARLSRKISALQAQLEKECKLNAES 452 (526)
Q Consensus 407 ELLqd~GL~k~~IspeDIvagdaKLtlkiDKL~eELEklnks~sa~ 452 (526)
..+.+..-+..+||++|.|++|+|+.|++||+.+||+++++++.+.
T Consensus 13 ~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~ 58 (65)
T 3sja_C 13 KERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSE 58 (65)
T ss_dssp HHHHHHHHHHTTSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3344444457899999999999999999999999999999998764
No 35
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=97.83 E-value=7.4e-06 Score=71.58 Aligned_cols=81 Identities=15% Similarity=0.269 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhhccc-Ccccccccccccccceeeec-ccccc-----CCCChhhhHhcHHHHHHHHHH-cCCCCCCCCCh
Q psy2679 351 KKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYL-----TPQTFEQKVHNVAFAFQLMQD-VGLAKPKARPE 422 (526)
Q Consensus 351 KkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~L-----tP~~~~qKLhNVslALELLqd-~GL~k~~Ispe 422 (526)
++.|++|||.|++.- |++|+|.-++|+||..|..| +.|.. ..-+.....+|..+||+..++ .|+. +-+.|+
T Consensus 11 ~~~LL~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~-~lL~pe 89 (121)
T 2d88_A 11 SSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGIS-PIMTGK 89 (121)
T ss_dssp SCHHHHHHHHHSTTSSSCCCCCSSHHHHTSHHHHHHHHHHCTTTSCTTTSCTTCHHHHHHHHHHHHHHHTCCC-CSSCHH
T ss_pred HHHHHHHHHHHhccCCCCCCCCchhhccccHHHHHHHHHhCcCcCCHHHcCccCHHHHHHHHHHHHHHHcCCC-CcCCHH
Confidence 467899999999986 79999999999999777754 33321 112345678999999999985 8995 568999
Q ss_pred hhhcc---cchhh
Q psy2679 423 DEFAK---HARLS 432 (526)
Q Consensus 423 DIvag---daKLt 432 (526)
|++++ |.|+.
T Consensus 90 D~~~~~~pD~ksi 102 (121)
T 2d88_A 90 EMASVGEPDKLSM 102 (121)
T ss_dssp HHHHSSCCCHHHH
T ss_pred HHhccCCCcHHHH
Confidence 99974 66655
No 36
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=97.81 E-value=1.4e-05 Score=68.57 Aligned_cols=78 Identities=26% Similarity=0.363 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhhccc-Ccccccccccccccceeeec-ccccc-----CCCChhhhHhcHHHHHHHHH-HcCCCCCCCCC
Q psy2679 350 VKKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYL-----TPQTFEQKVHNVAFAFQLMQ-DVGLAKPKARP 421 (526)
Q Consensus 350 VKkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~L-----tP~~~~qKLhNVslALELLq-d~GL~k~~Isp 421 (526)
-|++|++|||.|++.. |++|+|.-++|+||..|..| +.|.. ..-......+|...||+..+ +.|+. +-++|
T Consensus 4 ~k~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~-~ll~~ 82 (109)
T 1bkr_A 4 AKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLT-KLLDP 82 (109)
T ss_dssp HHHHHHHHHHHHTTTCTTCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCCTTCHHHHHHHHHHHHHHHHCCC-CCCCH
T ss_pred HHHHHHHHHHHHHccCCCCCCCCCcccccccHHHHHHHHHHCcCCCCHHHcCcCCHHHHHHHHHHHHHHHcCCC-ccCCH
Confidence 4789999999999987 79999999999999666654 33311 11234567899999999998 68995 55889
Q ss_pred hhhhccc
Q psy2679 422 EDEFAKH 428 (526)
Q Consensus 422 eDIvagd 428 (526)
+|+..+.
T Consensus 83 eDv~~~~ 89 (109)
T 1bkr_A 83 EDISVDH 89 (109)
T ss_dssp HHHSSSS
T ss_pred HHccCCC
Confidence 9987644
No 37
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=97.71 E-value=2e-05 Score=68.55 Aligned_cols=83 Identities=19% Similarity=0.254 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHhhccc-Ccccccccccccccceeeec-cccccCCC-----ChhhhHhcHHHHHHHHH-HcCCCCCCCC
Q psy2679 349 VVKKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYLTPQ-----TFEQKVHNVAFAFQLMQ-DVGLAKPKAR 420 (526)
Q Consensus 349 vVKkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~LtP~-----~~~qKLhNVslALELLq-d~GL~k~~Is 420 (526)
--|+++++|||.|++.- |++|+|.-++|+||.-|..| |.|...-. ......+|...||+..+ +.|+. +-++
T Consensus 8 ~~~~~LL~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~-~ll~ 86 (118)
T 1bhd_A 8 NSEKILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKMSPIERLEHAFSKAQTYLGIE-KLLD 86 (118)
T ss_dssp HHHHHHHHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHHSCHHHHHHHHHHHHHHHHCCC-CCSC
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCCcccccCcHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCC-cccC
Confidence 35789999999999987 69999999999999777654 33322111 13456899999999997 78995 4578
Q ss_pred Chhhhcc--cchhh
Q psy2679 421 PEDEFAK--HARLS 432 (526)
Q Consensus 421 peDIvag--daKLt 432 (526)
|+|+..+ |.|+.
T Consensus 87 ~eDv~~~~pD~ksv 100 (118)
T 1bhd_A 87 PEDVAVRLPDKKSI 100 (118)
T ss_dssp HHHHHTSCCCHHHH
T ss_pred HHHhhcCCCcHHHH
Confidence 9999865 54555
No 38
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=97.64 E-value=3.1e-05 Score=68.27 Aligned_cols=77 Identities=25% Similarity=0.341 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhhccc-Ccccccccccccccceeeec-ccccc-----CCCChhhhHhcHHHHHHHHH-HcCCCCCCCCCh
Q psy2679 351 KKSLITFVNKHLAKV-NLEVTDLDTQFHDGGFFVPL-HDFYL-----TPQTFEQKVHNVAFAFQLMQ-DVGLAKPKARPE 422 (526)
Q Consensus 351 KkTf~~FVNkHL~Kl-nL~VtDLetqFaDGgyFIpL-~~f~L-----tP~~~~qKLhNVslALELLq-d~GL~k~~Ispe 422 (526)
|++|++|||.|++.. |++|+|.-++|+||..|..| |.|.. ..-......+|...||+..+ +.|+. +-++|+
T Consensus 9 k~~LL~W~q~~~~~y~~v~V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~Lgi~-~ll~~e 87 (127)
T 1wyq_A 9 KDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNAFNLAEKELGLT-KLLDPE 87 (127)
T ss_dssp THHHHHHHHHHHHTSSSCCCSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCSSCCHHHHHHHHHHHHHTTCCC-CCSCTT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCcccccccHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCC-cccCHH
Confidence 688999999999987 79999999999999666654 33321 11224567899999999998 57995 457899
Q ss_pred hhhccc
Q psy2679 423 DEFAKH 428 (526)
Q Consensus 423 DIvagd 428 (526)
|+..+.
T Consensus 88 Dv~~~~ 93 (127)
T 1wyq_A 88 DVNVDQ 93 (127)
T ss_dssp TSCSSS
T ss_pred HhccCC
Confidence 987644
No 39
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=97.57 E-value=0.00037 Score=61.96 Aligned_cols=102 Identities=18% Similarity=0.270 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCCCC
Q psy2679 91 ELIFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSN 170 (526)
Q Consensus 91 el~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~~~ 170 (526)
++...+.+|||+.|... + -.|+.+.|.||+||-+|+.++.--.+....-+.+.--|++|+...|++.. .+|++...
T Consensus 17 ~~~~e~~~WIe~~l~~~-~-~~~l~~~L~DGvvLCkL~N~l~P~~v~ki~~~~~~f~~~eNI~~Fl~a~~-~~Gv~~~~- 92 (136)
T 1wyp_A 17 QREQELREWIEGVTGRR-I-GNNFMDGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAIT-KYGVKPHD- 92 (136)
T ss_dssp HHHHHHHHHHHHHTCCC-C-CSCTTHHHHTSHHHHHHHHHHSTTSSSCCCCSSCSHHHHHHHHHHHHHHH-HHTCCGGG-
T ss_pred HHHHHHHHHHHHHhCCC-C-cHHHHHHHccHHhHHHHHHhhCCCCcccccccccchHHHHHHHHHHHHHH-HcCCCccc-
Confidence 46678999999999754 3 67999999999999999999964332222122233567889998888885 67877532
Q ss_pred CcccccccccccchhHHHHHHHHhhCCCcccCCccceeecc-cCchHHHHHHHHHHHHhc
Q psy2679 171 TKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIH-SKNLVPILHLLVSLVRHF 229 (526)
Q Consensus 171 ~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~-~knl~ail~LLVaLa~~f 229 (526)
-....+++ .||+..++.-|.||+++.
T Consensus 93 ---------------------------------lF~~~DL~e~kn~~~V~~cL~aL~~~a 119 (136)
T 1wyp_A 93 ---------------------------------IFEANDLFENTNHTQVQSTLLALASMA 119 (136)
T ss_dssp ---------------------------------CCCHHHHHSCSCSHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccCchHHhcCCCHHHHHHHHHHHHHHH
Confidence 12234444 599999999999999875
No 40
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=97.57 E-value=0.00029 Score=63.41 Aligned_cols=102 Identities=21% Similarity=0.258 Sum_probs=74.3
Q ss_pred HHHHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCCCC
Q psy2679 91 ELIFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSN 170 (526)
Q Consensus 91 el~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~~~ 170 (526)
++...+.+|||+.|... | -.|+.+.|.||+||-+|+.++.--.+....-+...--|++|+...|++.. .+|++...
T Consensus 17 ~~~~e~~~WIe~~l~~~-i-~~~l~~~L~DGvvLCkL~N~l~P~~v~kin~~~~~f~~~eNI~~FL~a~~-~~Gv~~~~- 92 (146)
T 1wyn_A 17 QKEAELRTWIEGLTGLS-I-GPDFQKGLKDGTILCTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMV-SYGMNPVD- 92 (146)
T ss_dssp THHHHHHHHHHHHHCCC-C-CSCHHHHHHTTSHHHHHHHHHCTTSCSCCCCSSCHHHHHHHHHHHHHHHH-HHTCCSSS-
T ss_pred HHHHHHHHHHHHHhCCC-C-cHHHHHHHccHHHHHHHHHHhCCCCccccccccccccHHHHHHHHHHHHH-HcCCCccc-
Confidence 35568899999999754 4 68999999999999999999974332221122233567888888888885 67887632
Q ss_pred CcccccccccccchhHHHHHHHHhhCCCcccCCccceeec-ccCchHHHHHHHHHHHHhc
Q psy2679 171 TKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESI-HSKNLVPILHLLVSLVRHF 229 (526)
Q Consensus 171 ~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I-~~knl~ail~LLVaLa~~f 229 (526)
-....++ -.||+..++.-|.||+++.
T Consensus 93 ---------------------------------lF~~~DL~e~kn~~~V~~cL~aL~~~a 119 (146)
T 1wyn_A 93 ---------------------------------LFEANDLFESGNMTQVQVSLLALAGKA 119 (146)
T ss_dssp ---------------------------------CCCHHHHHTCSCSHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccChhHHHhcCChHHHHHHHHHHHHHH
Confidence 1223444 4699999999999999886
No 41
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=97.50 E-value=0.00031 Score=59.96 Aligned_cols=98 Identities=18% Similarity=0.294 Sum_probs=71.4
Q ss_pred HHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCCCCCcc
Q psy2679 94 FVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKW 173 (526)
Q Consensus 94 ~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~~~~~~ 173 (526)
..+.+|||+.|... + -.|+.+.|.||+||-+|+.++..-.+....-+.+.--|++++...|++.. .+|++...
T Consensus 6 ~e~~~WIe~~l~~~-~-~~~l~~~L~dGvvLCkL~N~l~P~~v~ki~~~~~~f~~~eNI~~Fl~a~~-~~Gv~~~~---- 78 (108)
T 1h67_A 6 RQLRVWIEGATGRR-I-GDNFMDGLKDGVILCELINKLQPGSVQKVNDPVQNWHKLENIGNFLRAIK-HYGVKPHD---- 78 (108)
T ss_dssp HHHHHHHHHHHSCC-C-CSCHHHHHHHCSHHHHHHHHHSTTSSTTCCCTTSSHHHHHHHHHHHHHHH-HHTSCGGG----
T ss_pred HHHHHHHHHHhCCC-C-cHHHHHHHccHHHHHHHHHHhCCCCcccccccccchHHHHHHHHHHHHHH-HcCCCccc----
Confidence 45789999999754 3 57999999999999999999974333322222333567889988888885 57877532
Q ss_pred cccccccccchhHHHHHHHHhhCCCcccCCccceeecc-cCchHHHHHHHHHHHHh
Q psy2679 174 SVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIH-SKNLVPILHLLVSLVRH 228 (526)
Q Consensus 174 ~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~-~knl~ail~LLVaLa~~ 228 (526)
-....+++ .||+..++.-|.||+++
T Consensus 79 ------------------------------lF~~~DL~e~kn~~~V~~~l~aL~~~ 104 (108)
T 1h67_A 79 ------------------------------IFEANDLFENTNHTQVQSTLIALASQ 104 (108)
T ss_dssp ------------------------------SCCHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred ------------------------------ccChhHHHhCCChHHHHHHHHHHHHH
Confidence 12234444 58999999999999886
No 42
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=97.44 E-value=0.00055 Score=60.88 Aligned_cols=96 Identities=9% Similarity=0.281 Sum_probs=74.4
Q ss_pred HHHHHHHhhhhcccc--ccccchh-hhhhhhHHHHHHHHHHccCcccccceec---ChHHHHHHHHHHHHHHHHHcCCCC
Q psy2679 94 FVLIEWINDELADQR--IIVKDLE-EDLYDGQILQKLLEKLNQEKLDVPEVTQ---SEEGQKQKLAIVLEAVNKALGLPR 167 (526)
Q Consensus 94 ~~li~WiN~~L~~~r--iiVkdl~-eDLyDG~vL~~Llekl~~~kl~v~ev~~---s~~~qkqkl~~vl~~v~~~l~~~~ 167 (526)
+.|+.|.|..|+.-. .-|+|.. .|+-||..+-.||+.+...-++...|++ +++..+++.+.+++.+. .||.+.
T Consensus 10 ~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~Ar-klG~~~ 88 (124)
T 1wjo_A 10 DIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMAR-RIGARV 88 (124)
T ss_dssp HHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHH-HTCCSC
T ss_pred HHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHH-HcCCCc
Confidence 568999999999633 4599999 9999999999999999999999998876 56777899999999995 688776
Q ss_pred CCCCcccccccccccchhHHHHHHHHh
Q psy2679 168 WSNTKWSVESIHSKNLVPILHLLVSLA 194 (526)
Q Consensus 168 ~~~~~~~~~~i~~k~~~~~~~~~~~~~ 194 (526)
.- ..|.|-.-|-..||.+++++.
T Consensus 89 ~l----~pEDIve~~pK~ilt~va~l~ 111 (124)
T 1wjo_A 89 YA----LPEDLVEVKPKMVMTVFACLM 111 (124)
T ss_dssp CC----CHHHHHHTCTTTTTHHHHHHH
T ss_pred cc----CHHHHhcCcchhhHHHHHHHH
Confidence 43 344444444455555555444
No 43
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=97.38 E-value=0.0011 Score=59.30 Aligned_cols=103 Identities=21% Similarity=0.228 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhhhhcccccc-----ccchhhhhhhhHHHHHHHHHHcc---Cccc--ccceecChHHHHHHHHHHHHHHH
Q psy2679 91 ELIFVLIEWINDELADQRII-----VKDLEEDLYDGQILQKLLEKLNQ---EKLD--VPEVTQSEEGQKQKLAIVLEAVN 160 (526)
Q Consensus 91 el~~~li~WiN~~L~~~rii-----Vkdl~eDLyDG~vL~~Llekl~~---~kl~--v~ev~~s~~~qkqkl~~vl~~v~ 160 (526)
|+...+.+|||+.|... |- -.|+.+-|.||+||-+|+.++.- -.+. +. -+...--|++|+...|++..
T Consensus 9 ~~e~e~~~WIe~~l~~~-l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~~kin-~~~~~f~~~eNI~~FL~ac~ 86 (144)
T 1ujo_A 9 ELEERLVEWIVVQCGPD-VGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVKVPEN-PPSMVFKQMEQVAQFLKAAE 86 (144)
T ss_dssp HHHHHHHHHHHHHHCTT-TCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSCCCSS-CCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-CCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcceeec-CCCchhHHHHHHHHHHHHHH
Confidence 45567889999999654 32 36999999999999999999965 2332 21 12234567889999999886
Q ss_pred HHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhc
Q psy2679 161 KALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHF 229 (526)
Q Consensus 161 ~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f 229 (526)
+ +|++... +-++ ++-.-.||+..++.-|.||+++.
T Consensus 87 ~-~Gv~~~~---------------------------lF~t------~DL~e~kn~~~V~~cL~aL~~~a 121 (144)
T 1ujo_A 87 D-YGVIKTD---------------------------MFQT------VDLYEGKDMAAVQRTLMALGSLA 121 (144)
T ss_dssp H-HTCCSSS---------------------------CCCH------HHHHTCSCHHHHHHHHHHHHHHH
T ss_pred H-cCcCccc---------------------------cCCh------hHHHhcCCHHHHHHHHHHHHHHH
Confidence 5 8887632 1111 34445789999999999998864
No 44
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=97.32 E-value=0.0012 Score=59.90 Aligned_cols=105 Identities=19% Similarity=0.280 Sum_probs=76.3
Q ss_pred HHHHHHHHHHhhhhccccccc-----cchhhhhhhhHHHHHHHHHHcc---CcccccceecChHHHHHHHHHHHHHHHHH
Q psy2679 91 ELIFVLIEWINDELADQRIIV-----KDLEEDLYDGQILQKLLEKLNQ---EKLDVPEVTQSEEGQKQKLAIVLEAVNKA 162 (526)
Q Consensus 91 el~~~li~WiN~~L~~~riiV-----kdl~eDLyDG~vL~~Llekl~~---~kl~v~ev~~s~~~qkqkl~~vl~~v~~~ 162 (526)
++...+.+||++.|... |-. .|+.+-|.||+||-+|+.++.- -.+.....+.+.--|++|+...|++..+
T Consensus 17 ~~e~e~~~WIe~~l~~~-l~~~~~~~~~~~~~LkDGvvLCkL~N~l~P~~~~~i~kIn~~~~~F~~~eNI~~FL~ac~~- 94 (155)
T 1wym_A 17 DLEQILIQWITTQCRKD-VGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAER- 94 (155)
T ss_dssp HHHHHHHHHHHHHSSSC-CCCCCSSHHHHHHHHHTSHHHHHHHHHHSCTTTCSCCCCCCCCCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhCCC-CCCCcccHHHHHHHHcchHHHHHHHHHhccccCCCcCcccCCCccccHHHHHHHHHHHHHH-
Confidence 67788999999998764 443 5899999999999999999975 3333222233446678899998988854
Q ss_pred cCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhcc
Q psy2679 163 LGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFR 230 (526)
Q Consensus 163 l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~ 230 (526)
+|++... +-++ ++-.-.||+..++.-|.||+++..
T Consensus 95 ~Gv~~~~---------------------------lF~t------~DL~e~kn~~~Vi~cL~aL~~~a~ 129 (155)
T 1wym_A 95 YGINTTD---------------------------IFQT------VDLWEGKNMACVQRTLMNLGGLAV 129 (155)
T ss_dssp HTCCTTT---------------------------CCCH------HHHHTCSCHHHHHHHHHHHHHHHT
T ss_pred cCCCccc---------------------------cCCh------HHHHhcCCHHHHHHHHHHHHHHHH
Confidence 7887632 1111 233446999999999999999854
No 45
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=96.58 E-value=0.0093 Score=56.46 Aligned_cols=103 Identities=18% Similarity=0.307 Sum_probs=74.7
Q ss_pred HHHHHHHHHHhhhhcccccc-ccchhhhhhhhHHHHHHHHHHccCcccccce---ecChHHHHHHHHHHHHHHHHHcCCC
Q psy2679 91 ELIFVLIEWINDELADQRII-VKDLEEDLYDGQILQKLLEKLNQEKLDVPEV---TQSEEGQKQKLAIVLEAVNKALGLP 166 (526)
Q Consensus 91 el~~~li~WiN~~L~~~rii-Vkdl~eDLyDG~vL~~Llekl~~~kl~v~ev---~~s~~~qkqkl~~vl~~v~~~l~~~ 166 (526)
+....+.+|||+.|... |- ..|+.+.|.||+||-+|+.++.--.+ +.| +...--|++|+...|++.. .+|++
T Consensus 55 ~~~~e~~~WIe~~l~~~-l~~~~~f~~~LrDGvvLCkLiN~l~P~sv--~kI~~~s~~~f~~~eNI~~FL~ac~-~~Gvp 130 (203)
T 1p5s_A 55 CRVDEAKKWIEECLGTD-LGPTSTFEQSLRNGVVLALLVQKFQPDKL--IKIFYSNELQFRHSDNINKFLDFIH-GIGLP 130 (203)
T ss_dssp HHHHHHHHHHHHHHTSC-CCCGGGHHHHHTTSHHHHHHHHHHCTTSC--CCCCCCSSSCCCHHHHHHHHHHHHH-HTTCC
T ss_pred HHHHHHHHHHHHHhCCC-CCChHHHHHHHcchHHHHHHHHHhCCCCc--ccccCCCCCcchHHHHHHHHHHHHH-HcCCC
Confidence 46788999999998654 44 45999999999999999999963322 333 1223468899999999886 57877
Q ss_pred CCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhcc
Q psy2679 167 RWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFR 230 (526)
Q Consensus 167 ~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~ 230 (526)
... +-+ +++-.-.||+..++.-|.||+++..
T Consensus 131 ~~~---------------------------lF~------t~DL~e~kn~~~Vi~~L~aL~~~a~ 161 (203)
T 1p5s_A 131 EIF---------------------------HFE------LTDIYEGKNLPKVIYCIHALSYFLS 161 (203)
T ss_dssp GGG---------------------------CCC------HHHHHSCSCHHHHHHHHHHHHHHHH
T ss_pred ccc---------------------------ccC------HHHHHhcCCHHHHHHHHHHHHHHHh
Confidence 632 011 1234456899999999999998753
No 46
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=96.57 E-value=0.01 Score=51.27 Aligned_cols=101 Identities=21% Similarity=0.322 Sum_probs=83.2
Q ss_pred HHHHHHHHhhhhccc-cccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy2679 93 IFVLIEWINDELADQ-RIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNT 171 (526)
Q Consensus 93 ~~~li~WiN~~L~~~-riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~~~~ 171 (526)
.+.|+.|+|..+++- .+-|+|.-.|..||..+-.|+....-.-++...+... .-+++++.+++.+.+.||.++.-
T Consensus 9 ~~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~--~~~~n~~~af~~Ae~~lgi~~lL-- 84 (116)
T 1wyl_A 9 QEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGL--GALEATAWALKVAENELGITPVV-- 84 (116)
T ss_dssp HHHHHHHHHHHHHHSTTCCCSCTTTTTTSSHHHHHHHHHHCTTSCCCSSGGGC--CHHHHHHHHHHHHHHTTCCCCCS--
T ss_pred HHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCCCCHHHhccC--CHHHHHHHHHHHHHHHcCCcccc--
Confidence 367899999999876 4779999999999999999999999888888877664 66888999999999999988743
Q ss_pred cccccccccccchhHHHHHHHHhhCCCcccCCccceeecccC-chHHHHHHHHHHHHhccC
Q psy2679 172 KWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSK-NLVPILHLLVSLVRHFRA 231 (526)
Q Consensus 172 ~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~k-nl~ail~LLVaLa~~f~~ 231 (526)
..++|.+. |=.++|-.+-.+-.+|+.
T Consensus 85 ----------------------------------~peD~~~~~d~ksv~tYvs~l~~~~~~ 111 (116)
T 1wyl_A 85 ----------------------------------SAQAVVAGSDPLGLIAYLSHFHSAFKS 111 (116)
T ss_dssp ----------------------------------CHHHHHHTSCHHHHHHHHHHHHHHSCC
T ss_pred ----------------------------------CHHHHhcCCchhHHHHHHHHHHHHccC
Confidence 35666665 777888888777777764
No 47
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=96.44 E-value=0.013 Score=51.02 Aligned_cols=100 Identities=14% Similarity=0.307 Sum_probs=83.1
Q ss_pred HHHHHHhhhhccc-cccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCCCCCcc
Q psy2679 95 VLIEWINDELADQ-RIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNTKW 173 (526)
Q Consensus 95 ~li~WiN~~L~~~-riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~~~~~~ 173 (526)
.|+.|+|..+++- .+-|+|.-.|..||..+-.|+....-.-++...++.+ .-+++++.+++.+.+.||.++.-
T Consensus 13 ~LL~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~--~~~~n~~~af~~Ae~~lgi~~lL---- 86 (121)
T 2d88_A 13 KLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQ--NVEKNNQLAFDIAEKELGISPIM---- 86 (121)
T ss_dssp HHHHHHHHHSTTSSSCCCCCSSHHHHTSHHHHHHHHHHCTTTSCTTTSCTT--CHHHHHHHHHHHHHHHTCCCCSS----
T ss_pred HHHHHHHHHhccCCCCCCCCchhhccccHHHHHHHHHhCcCcCCHHHcCcc--CHHHHHHHHHHHHHHHcCCCCcC----
Confidence 5789999999885 5779999999999999999999999888888887765 56788999999999999988743
Q ss_pred cccccccccchhHHHHHHHHhhCCCcccCCccceeeccc---CchHHHHHHHHHHHHhccCC
Q psy2679 174 SVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHS---KNLVPILHLLVSLVRHFRAP 232 (526)
Q Consensus 174 ~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~---knl~ail~LLVaLa~~f~~~ 232 (526)
..++|.+ -|=.++|-.+-.+-.+|+..
T Consensus 87 --------------------------------~peD~~~~~~pD~ksimtYvs~l~~~~~~~ 116 (121)
T 2d88_A 87 --------------------------------TGKEMASVGEPDKLSMVMYLTQFYEMFKDS 116 (121)
T ss_dssp --------------------------------CHHHHHHSSCCCHHHHHHHHHHHHHHHSSC
T ss_pred --------------------------------CHHHHhccCCCcHHHHHHHHHHHHHHcccC
Confidence 3577765 37788888888888888654
No 48
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=96.39 E-value=0.016 Score=54.50 Aligned_cols=106 Identities=19% Similarity=0.263 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHhhhhcccccc-ccchhhhhhhhHHHHHHHHHHccCcccccce----------ecChHHHHHHHHHHHH
Q psy2679 89 LQELIFVLIEWINDELADQRII-VKDLEEDLYDGQILQKLLEKLNQEKLDVPEV----------TQSEEGQKQKLAIVLE 157 (526)
Q Consensus 89 ~~el~~~li~WiN~~L~~~rii-Vkdl~eDLyDG~vL~~Llekl~~~kl~v~ev----------~~s~~~qkqkl~~vl~ 157 (526)
....+.-+.+||++.|.. .+- ..|+.+-|.||+||-+|+.++.---++...| +...--|++|+...|+
T Consensus 45 yl~~~~e~~~WIe~~lg~-~l~~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~~~~~~~~~~~~F~~~eNI~~FL~ 123 (193)
T 3i6x_A 45 YLCHLEEAKRWMEACLGE-DLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLN 123 (193)
T ss_dssp HHHHHHHHHHHHHHHHSS-CCCCGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTTTCHHHHHSCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC-CCCChHHHHHHhccHHHHHHHHHHHCCCCCCccccCCcccccccCcccchHHHHHHHHHHH
Confidence 344555788999999875 444 3589999999999999999997543322222 2233457888888888
Q ss_pred HHHHHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhc
Q psy2679 158 AVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHF 229 (526)
Q Consensus 158 ~v~~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f 229 (526)
+.. .+|++... +-++ ++-.-.||+..++.-|.||++..
T Consensus 124 ac~-~~Gvp~~~---------------------------lFet------~DL~e~kn~~~V~~cL~aL~~~a 161 (193)
T 3i6x_A 124 AMD-EIGLPKIF---------------------------YPET------TDIYDRKNMPRCIYCIHALSLYL 161 (193)
T ss_dssp HHH-HHTCCGGG---------------------------CCCH------HHHHSCSCHHHHHHHHHHHHHHH
T ss_pred HHH-HcCCCccc---------------------------CCCc------HHHhcCCCHHHHHHHHHHHHHHH
Confidence 885 57777632 1111 23344678888888888888765
No 49
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=96.36 E-value=0.0061 Score=56.95 Aligned_cols=100 Identities=18% Similarity=0.243 Sum_probs=68.6
Q ss_pred HHHHHHHhhhhcccccc-ccchhhhhhhhHHHHHHHHHHccCccccccee----------cChHHHHHHHHHHHHHHHHH
Q psy2679 94 FVLIEWINDELADQRII-VKDLEEDLYDGQILQKLLEKLNQEKLDVPEVT----------QSEEGQKQKLAIVLEAVNKA 162 (526)
Q Consensus 94 ~~li~WiN~~L~~~rii-Vkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~----------~s~~~qkqkl~~vl~~v~~~ 162 (526)
..+.+||++.+.. .+- ..|+++-|.||+||-+|+.++.---++.+.|- ...--|++|+...|++..+
T Consensus 28 ~e~~~WIe~~lg~-~lp~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~~~~~~~~~~~~f~~~eNI~~FL~ac~~- 105 (190)
T 2rr8_A 28 EEAKRWMEACLGE-DLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDE- 105 (190)
T ss_dssp HHHHHHHHHHSCC-CCCCHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTTTCHHHHHTCCCSSTHHHHHHHHHGGGG-
T ss_pred HHHHHHHHHHhCC-CCCChhHHHHHHcchhhHHHHHHHhCCCCcccccccccccccccCCCCcchHHHHHHHHHHHHHH-
Confidence 7899999999965 333 36899999999999999999974433333321 1123456777777776644
Q ss_pred cCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccc-eeecccCchHHHHHHHHHHHHhc
Q psy2679 163 LGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWS-VESIHSKNLVPILHLLVSLVRHF 229 (526)
Q Consensus 163 l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kws-v~~I~~knl~ail~LLVaLa~~f 229 (526)
+|++... -.. ++-.-.||+..++.-|.||+++-
T Consensus 106 ~Gvp~~~----------------------------------lFet~DL~e~kn~~~Vi~cL~aL~~~a 139 (190)
T 2rr8_A 106 IGLPKIF----------------------------------YPETTDIYDRKNMPRCIYCIHALSLYL 139 (190)
T ss_dssp TTCCSTT----------------------------------CCCHHHHTCTTCCHHHHHHHHHHHHHH
T ss_pred cCCCccc----------------------------------cCCHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 6666522 112 23444689999999999999874
No 50
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=96.32 E-value=0.023 Score=51.66 Aligned_cols=102 Identities=18% Similarity=0.313 Sum_probs=74.4
Q ss_pred HHHHHHHHHhhhhcccccc-ccchhhhhhhhHHHHHHHHHHccCcccccce---ecChHHHHHHHHHHHHHHHHHcCCCC
Q psy2679 92 LIFVLIEWINDELADQRII-VKDLEEDLYDGQILQKLLEKLNQEKLDVPEV---TQSEEGQKQKLAIVLEAVNKALGLPR 167 (526)
Q Consensus 92 l~~~li~WiN~~L~~~rii-Vkdl~eDLyDG~vL~~Llekl~~~kl~v~ev---~~s~~~qkqkl~~vl~~v~~~l~~~~ 167 (526)
-...+.+||++.|... |- -.|+.+-|.||+||-+|+.++.--. ++.| +.+.--|++++...|++.. .+|++.
T Consensus 12 ~~~e~~~WIe~~l~~~-l~~~~~l~~~LkdGvvLCkL~N~l~P~~--i~kI~~~~~~~f~~~eNI~~FL~a~~-~~Gv~~ 87 (159)
T 1p2x_A 12 RVDEAKKWIEECLGTD-LGPTSTFEQSLRNGVVLALLVQKFQPDK--LIKIFYSNELQFRHSDNINKFLDFIH-GIGLPE 87 (159)
T ss_dssp HHHHHHHHHHHHHTSC-CCCGGGHHHHTTTSHHHHHHHHHHCTTS--CCCCCCCSSCCTTHHHHHHHHHHHHH-HTTCCG
T ss_pred HHHHHHHHHHHHhCCC-CCChHHHHHHHcchHHHHHHHHHhCCCC--ccccccccCCcchHHHHHHHHHHHHH-HcCCCc
Confidence 3577899999999653 44 2589999999999999999996332 2333 2344578999999999885 678776
Q ss_pred CCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhcc
Q psy2679 168 WSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFR 230 (526)
Q Consensus 168 ~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~ 230 (526)
.. +-+ +++-.-.||+..++.-|.||+++..
T Consensus 88 ~~---------------------------lF~------~~DL~e~kn~~~Vi~~L~aL~~~~~ 117 (159)
T 1p2x_A 88 IF---------------------------HFE------LTDIYEGKNLPKVIYCIHALSYFLS 117 (159)
T ss_dssp GG---------------------------CCC------HHHHSSCSCHHHHHHHHHHHHHHHH
T ss_pred cc---------------------------ccC------HHHHHhcCCHHHHHHHHHHHHHHHh
Confidence 32 011 1344457899999999999998864
No 51
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=96.26 E-value=0.02 Score=50.55 Aligned_cols=96 Identities=10% Similarity=0.256 Sum_probs=75.3
Q ss_pred HHHHHHHHhhhhccc-cccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy2679 93 IFVLIEWINDELADQ-RIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNT 171 (526)
Q Consensus 93 ~~~li~WiN~~L~~~-riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~~~~ 171 (526)
.+.|+.|+|..+++- ++-|+|.-.|..||..+-.|+..+.-.-++...+... .-+++++.+++.+.+.||.++.-
T Consensus 9 k~~LL~W~q~~~~~y~~v~V~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~--~~~~n~~~af~~Ae~~lgip~lL-- 84 (128)
T 2d87_A 9 KQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQ--NRRQNFEVAFSSAETHADCPQLL-- 84 (128)
T ss_dssp HHHHHHHHHHHSSSCTTCCCSCTTTTTTSSHHHHHHHHHHCTTTSCSTTSCSS--CHHHHHHHHHHHHHHHHCCCCCS--
T ss_pred HHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCCHHHcCcc--CHHHHHHHHHHHHHHcCCCCccc--
Confidence 367899999999986 5779999999999999999999999888888877654 56788999999999999988743
Q ss_pred ccccccccccc---chhHHHHHHHHh
Q psy2679 172 KWSVESIHSKN---LVPILHLLVSLA 194 (526)
Q Consensus 172 ~~~~~~i~~k~---~~~~~~~~~~~~ 194 (526)
++|.|..-| -..||..|.++.
T Consensus 85 --~peD~v~~~~pD~ksvmtYvs~l~ 108 (128)
T 2d87_A 85 --DTEDMVRLREPDWKCVYTYIQEFY 108 (128)
T ss_dssp --CHHHHHHSSSCCHHHHHHHHHHHH
T ss_pred --CHHHHhccCCccHHHHHHHHHHHH
Confidence 455553323 345555555544
No 52
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=96.16 E-value=0.018 Score=50.30 Aligned_cols=100 Identities=16% Similarity=0.222 Sum_probs=67.6
Q ss_pred HHHHHHHHHhhhhccc---c-cc--ccchhhhhhhhHHHHHHHHHHccCccccccee---cChHHHHHHHHHHHHHHHHH
Q psy2679 92 LIFVLIEWINDELADQ---R-II--VKDLEEDLYDGQILQKLLEKLNQEKLDVPEVT---QSEEGQKQKLAIVLEAVNKA 162 (526)
Q Consensus 92 l~~~li~WiN~~L~~~---r-ii--Vkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~---~s~~~qkqkl~~vl~~v~~~ 162 (526)
+...+.+|||+.+..+ + +- ..+|.+.|.||+||-+|+.++.--.++ .|. ...--|++++...|++..+
T Consensus 7 ~e~e~~~WI~~~~~l~~~~~~~~~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~--ki~~~~~~~f~~~eNI~~FL~a~~~- 83 (121)
T 1wyr_A 7 GEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVE--KFCLDPQTEADCINNINDFLKGCAT- 83 (121)
T ss_dssp SHHHHHHHHHHHTSSCCCSSCCSCHHHHHHHHHHHSHHHHHHHHHHSTTCCS--CCCSSCCSHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhcCcCCcccCCCCcHHHHHHHHccHHHHHHHHHHhCCCCCC--cCCCCCcchHHHHHHHHHHHHHHHH-
Confidence 4567899999985411 1 21 123789999999999999999743333 332 2235678888888888865
Q ss_pred cCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHHhcc
Q psy2679 163 LGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVRHFR 230 (526)
Q Consensus 163 l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~~f~ 230 (526)
+|..--+ +++-.-.||+..++.-|.||+++-.
T Consensus 84 ~g~~~F~------------------------------------~~DL~e~kn~~~V~~cL~aL~~~~~ 115 (121)
T 1wyr_A 84 LQVEIFD------------------------------------PDDLYSGVNFSKVLSTLLAVNKATE 115 (121)
T ss_dssp HTCCCCC------------------------------------HHHHHTCSCHHHHHHHHHHHHHHHS
T ss_pred cCCCccC------------------------------------HHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 4542211 1233346899999999999998754
No 53
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=96.07 E-value=0.034 Score=49.10 Aligned_cols=99 Identities=21% Similarity=0.349 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhhh--hcccccc---ccch-hhhhhhhHHHHHHHHHHccCcccccce---ecChHHHHHHHHHHHHHHHH
Q psy2679 91 ELIFVLIEWINDE--LADQRII---VKDL-EEDLYDGQILQKLLEKLNQEKLDVPEV---TQSEEGQKQKLAIVLEAVNK 161 (526)
Q Consensus 91 el~~~li~WiN~~--L~~~rii---Vkdl-~eDLyDG~vL~~Llekl~~~kl~v~ev---~~s~~~qkqkl~~vl~~v~~ 161 (526)
+....+.+|||+. |.+.+.. -.|+ ++-|.||+||-+|+.++.--.++ .| ++..--|++++...|++..+
T Consensus 12 ~~~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~--kI~~~~~~~f~~~eNI~~FL~a~~~ 89 (126)
T 2l3g_A 12 NSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIE--KVYPEPRSESECLSNIREFLRGCGA 89 (126)
T ss_dssp CHHHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCS--CCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCC--ccCCCCCcchHHHHHHHHHHHHHHH
Confidence 3456788999998 4442222 2243 78888999999999999744333 34 22345678899998988866
Q ss_pred HcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeec-ccCchHHHHHHHHHHHHh
Q psy2679 162 ALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESI-HSKNLVPILHLLVSLVRH 228 (526)
Q Consensus 162 ~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I-~~knl~ail~LLVaLa~~ 228 (526)
.+|..-- ...++ -.||+..++.-|.||++.
T Consensus 90 ~~g~~lF-------------------------------------~t~DL~e~kn~~~V~~cL~aL~~~ 120 (126)
T 2l3g_A 90 SLRLETF-------------------------------------DANDLYQGQNFNKVLSSLVTLNKV 120 (126)
T ss_dssp TSCCCCC-------------------------------------CHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred hCCCCcc-------------------------------------CHHHHHhCCCHHHHHHHHHHHHHH
Confidence 4554221 12333 458999998888898876
No 54
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.02 E-value=0.028 Score=48.79 Aligned_cols=100 Identities=11% Similarity=0.264 Sum_probs=79.2
Q ss_pred HHHHHHHHhhhhccc-cccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy2679 93 IFVLIEWINDELADQ-RIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRWSNT 171 (526)
Q Consensus 93 ~~~li~WiN~~L~~~-riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~~~~ 171 (526)
.+.|+.|+|..+++- .+-|+|.-.|..||..+-.|+....-.-++...+... .-+++++..++.. +.||.++.-
T Consensus 11 ~~~LL~W~~~~~~~y~~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~~--~~~~n~~~af~~a-~~LGi~~ll-- 85 (119)
T 2d89_A 11 SQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQ--DIKENNKKAYDGF-ASIGISRLL-- 85 (119)
T ss_dssp HHHHHHHHHHHTTTCSSCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCTT--CSHHHHHHHHHHH-HHHTCCCCS--
T ss_pred HHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCChhhhccc--CHHHHHHHHHHHH-HHhCCCccc--
Confidence 467899999999986 4669999999999999999999999888888888765 4567777777765 678887632
Q ss_pred cccccccccccchhHHHHHHHHhhCCCcccCCccceeecccC---chHHHHHHHHHHHHhccC
Q psy2679 172 KWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSK---NLVPILHLLVSLVRHFRA 231 (526)
Q Consensus 172 ~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~k---nl~ail~LLVaLa~~f~~ 231 (526)
..|+|.+. |=.++|-.+-.+-.+|+.
T Consensus 86 ----------------------------------~peDi~~~~~pD~ksvmtYvs~l~~~f~~ 114 (119)
T 2d89_A 86 ----------------------------------EPSDMVLLAIPDKLTVMTYLYQIRAHFSS 114 (119)
T ss_dssp ----------------------------------CHHHHHHSSSCCHHHHHHHHHHHHHHHSC
T ss_pred ----------------------------------CHHHHhccCCCcHHHHHHHHHHHHHHccC
Confidence 35777643 777888888888777763
No 55
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=96.02 E-value=0.02 Score=49.75 Aligned_cols=73 Identities=14% Similarity=0.300 Sum_probs=63.2
Q ss_pred HHHHHHHHhhhhcccc-ccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCC
Q psy2679 93 IFVLIEWINDELADQR-IIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPR 167 (526)
Q Consensus 93 ~~~li~WiN~~L~~~r-iiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~ 167 (526)
.+.|+.|+|..+++-+ +-|+|.-.|..||..+-.|+....-.-++...+... .-+++++.+++.+.+.||.++
T Consensus 10 ~~~LL~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~--~~~~n~~~af~~Ae~~lgi~~ 83 (118)
T 1bhd_A 10 EKILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKM--SPIERLEHAFSKAQTYLGIEK 83 (118)
T ss_dssp HHHHHHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHHS--CHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhccCCCCCCCCCcccccCcHHHHHHHHHHCcCcCCHHHhCcC--CHHHHHHHHHHHHHHHcCCCc
Confidence 4679999999998764 779999999999999999999999888887777654 457789999999988999876
No 56
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=95.94 E-value=0.039 Score=47.17 Aligned_cols=74 Identities=18% Similarity=0.322 Sum_probs=64.5
Q ss_pred HHHHHHHHhhhhccc-cccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCC
Q psy2679 93 IFVLIEWINDELADQ-RIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRW 168 (526)
Q Consensus 93 ~~~li~WiN~~L~~~-riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~ 168 (526)
.+.|+.|+|..+++- ++-|+|.-.|..||..+-.|+....-.-++...+..+ .-+++++.+++.+.+.||.++-
T Consensus 5 k~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~--~~~~n~~~af~~Ae~~lgi~~l 79 (109)
T 1bkr_A 5 KDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKS--NAHYNLQNAFNLAEQHLGLTKL 79 (109)
T ss_dssp HHHHHHHHHHHTTTCTTCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCCTT--CHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHccCCCCCCCCCcccccccHHHHHHHHHHCcCCCCHHHcCcC--CHHHHHHHHHHHHHHHcCCCcc
Confidence 467999999999975 4779999999999999999999999888888887665 5678899999999999998873
No 57
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=95.35 E-value=0.054 Score=47.61 Aligned_cols=73 Identities=19% Similarity=0.328 Sum_probs=63.9
Q ss_pred HHHHHHHhhhhccc-cccccchhhhhhhhHHHHHHHHHHccCcccccceecChHHHHHHHHHHHHHHHHHcCCCCC
Q psy2679 94 FVLIEWINDELADQ-RIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSEEGQKQKLAIVLEAVNKALGLPRW 168 (526)
Q Consensus 94 ~~li~WiN~~L~~~-riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~~ 168 (526)
+.|+.|+|..+++- ++-|.|.-.|..||..+-.|+....-.-++...+... .-+++++.+++.+.+.||.++-
T Consensus 10 ~~LL~W~q~~~~~y~~v~V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~~--~~~~n~~~af~~Ae~~Lgi~~l 83 (127)
T 1wyq_A 10 DALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKC--NAHYNLQNAFNLAEKELGLTKL 83 (127)
T ss_dssp HHHHHHHHHHHHTSSSCCCSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCSS--CCHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHhcCCCCCCCCCcccccccHHHHHHHHHHCcCcCCHHHhCcC--CHHHHHHHHHHHHHHHcCCCcc
Confidence 57899999999875 4779999999999999999999999888888888765 5678899999999999998873
No 58
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.01 E-value=0.093 Score=46.82 Aligned_cols=93 Identities=17% Similarity=0.338 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHhhcccCccccccccccccc--------cee---eeccccccCCCChhhhHhcHHHH-HHHHHHcCCCC
Q psy2679 349 VVKKSLITFVNKHLAKVNLEVTDLDTQFHDG--------GFF---VPLHDFYLTPQTFEQKVHNVAFA-FQLMQDVGLAK 416 (526)
Q Consensus 349 vVKkTf~~FVNkHL~KlnL~VtDLetqFaDG--------gyF---IpL~~f~LtP~~~~qKLhNVslA-LELLqd~GL~k 416 (526)
...+.+.+|+| .+. ++.++.++..||+|| .|| |.||.|. .-.+..+|+.|=+.= ...++..|+..
T Consensus 15 ee~~el~~WL~-~l~-Ls~~~rn~rRDFSdG~lvAEIl~~y~Pk~Vdlh~y~-~~~S~~~K~~NW~~ln~kvl~kl~~~l 91 (127)
T 2ee7_A 15 EALHQLYLWVD-NIP-LSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYV-PANSLQQKLSNWGHLNRKVLKRLNFSV 91 (127)
T ss_dssp HHHHHHHHHHH-HSC-CSCCSSCHHHHHTTSHHHHHHHHHHCTTTCCCSSCC-CCSSHHHHHHHHHHHHHHTTGGGTCCC
T ss_pred HHHHHHHHHHH-cCC-CCCCCCchhhhccchhHHHHHHHHHCcCcccccccC-CCCcHHHHHHhHHHHHHHHHHHcCCCC
Confidence 34578899999 333 566788999999999 333 5677773 346889999999876 47899999988
Q ss_pred CCCCChhhhcccchhhhhH-HHHHHHHHH
Q psy2679 417 PKARPEDEFAKHARLSRKI-SALQAQLEK 444 (526)
Q Consensus 417 ~~IspeDIvagdaKLtlki-DKL~eELEk 444 (526)
.+-..++++++..-+.-.+ -.++..+++
T Consensus 92 ~~~~i~~i~~~~~Gaie~lL~~L~~~l~~ 120 (127)
T 2ee7_A 92 PDDVMRKIAQCAPGVVELVLIPLRQRLEE 120 (127)
T ss_dssp CHHHHHHHHTTCTTTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 8877788888776665332 333444443
No 59
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=92.66 E-value=0.59 Score=42.81 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccc---ee--c--ChHHHHHHHHHHHHHHHHH
Q psy2679 90 QELIFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPE---VT--Q--SEEGQKQKLAIVLEAVNKA 162 (526)
Q Consensus 90 ~el~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~e---v~--~--s~~~qkqkl~~vl~~v~~~ 162 (526)
.|+...|+.|+|.--.. --++++ +||.||.+|.+++..+...-.+.+. +. . .-.--.++|+.+++.+.+-
T Consensus 8 ~~~~~aLl~W~~tf~~~--~~~~~~-~dL~DG~~L~~iL~~IDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~~Y 84 (164)
T 1wix_A 8 LPLCDSLIIWLQTFKTA--SPCQDV-KQLTNGVTMAQVLHQIDVAWFSESWLSRIKDDVGDNWRIKASNLKKVLHGITSY 84 (164)
T ss_dssp CHHHHHHHHHHTTCCCS--SCCCSH-HHHTTSHHHHHHHHHHCTTTSCHHHHTTCCSGGGGCSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCC--CCcCcH-HHhccHHHHHHHHHHhCccccCchHhhhhcccCcccHHHHHHHHHHHHHHHHHH
Confidence 68999999999986443 245665 6999999999999999888766432 21 1 1133678999999988765
Q ss_pred cC
Q psy2679 163 LG 164 (526)
Q Consensus 163 l~ 164 (526)
.+
T Consensus 85 y~ 86 (164)
T 1wix_A 85 YH 86 (164)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 60
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=92.04 E-value=0.22 Score=44.15 Aligned_cols=73 Identities=14% Similarity=0.323 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhhcccCccccccccccccccee-----------eeccccccCCCChhhhHhcHHHHHHHHHHcCCCCCCC
Q psy2679 351 KKSLITFVNKHLAKVNLEVTDLDTQFHDGGFF-----------VPLHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPKA 419 (526)
Q Consensus 351 KkTf~~FVNkHL~KlnL~VtDLetqFaDGgyF-----------IpL~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~I 419 (526)
++.++.|||.-| +..++.+| +++||.-+ |||++..-++....+.++|...-.+.+++.|+++ .|
T Consensus 7 r~ElL~WIN~~L---~~~~~kiE-~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af~k~gV~k-~i 81 (123)
T 2qjz_A 7 RHDMLAWINESL---QLNLTKIE-QLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDK-II 81 (123)
T ss_dssp HHHHHHHHHHHH---TCCCCCGG-GGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHHTCCC-CC
T ss_pred HHHHHHHHHHHH---CCCCchHH-HcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHHHHcCCCC-cc
Confidence 467899999987 56677777 99999222 5787887788899999999999999999999975 56
Q ss_pred CChhhhccc
Q psy2679 420 RPEDEFAKH 428 (526)
Q Consensus 420 speDIvagd 428 (526)
..+.++.|.
T Consensus 82 ~v~kLvkgk 90 (123)
T 2qjz_A 82 PVDKLVKGK 90 (123)
T ss_dssp CHHHHTTCC
T ss_pred CHHHHHcCC
Confidence 666666554
No 61
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=91.50 E-value=0.6 Score=41.41 Aligned_cols=69 Identities=20% Similarity=0.380 Sum_probs=49.0
Q ss_pred HHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHc--cCccc-ccceecChHHHHHHHHHHHHHHHHHcCCCC
Q psy2679 94 FVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLN--QEKLD-VPEVTQSEEGQKQKLAIVLEAVNKALGLPR 167 (526)
Q Consensus 94 ~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~--~~kl~-v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~ 167 (526)
..|++|||+.|... +..+ |+|-||.++-+|+.+|. .+.|. |.--+-++-.+.++.....++.++ +|++.
T Consensus 8 ~ElL~WIN~~L~~~---~~ki-E~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af~k-~gV~k 79 (123)
T 2qjz_A 8 HDMLAWINESLQLN---LTKI-EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKR-MGVDK 79 (123)
T ss_dssp HHHHHHHHHHHTCC---CCCG-GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHH-HTCCC
T ss_pred HHHHHHHHHHHCCC---CchH-HHcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHHHH-cCCCC
Confidence 35789999999765 2333 69999999999999995 33332 222455667778888888777754 45554
No 62
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=90.97 E-value=0.62 Score=48.97 Aligned_cols=105 Identities=22% Similarity=0.265 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhhh--hccccc------cccchhhhhhhhHHHHHHHHHHccCccccccee---cC-hHHHHHHHHHHHH
Q psy2679 90 QELIFVLIEWINDE--LADQRI------IVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVT---QS-EEGQKQKLAIVLE 157 (526)
Q Consensus 90 ~el~~~li~WiN~~--L~~~ri------iVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~---~s-~~~qkqkl~~vl~ 157 (526)
.|+-+--.+|+++. |-..+. -|-||.+-|.||+||-+|+.+|.--.+.++.+. +. .--|++++..-|+
T Consensus 4 ~~~w~~~~~Wl~~~~~l~~~~~~~~~~~~~~~l~~~L~~G~~Lc~l~n~l~p~~v~~~~~~~~~~~~~f~~~~ni~~Fl~ 83 (587)
T 3ky9_A 4 KELWRQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLS 83 (587)
T ss_dssp -CHHHHHHHHHHHTTCSCTTSTTTSTTCCHHHHHHHHSSTHHHHHHHHHHSTTSSCGGGSCSSCTTBHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCcccccCCCCChhhHHHHhCcHHHHHHHHHHhCCCCCCccccCCCccccchHHHHHHHHHHH
Confidence 35556678899975 333222 268999999999999999999986555444553 22 3667889999999
Q ss_pred HHHHHcCCCCCCCCcccccccccccchhHHHHHHHHhhCCCcccCCccceeecccCchHHHHHHHHHHHH
Q psy2679 158 AVNKALGLPRWSNTKWSVESIHSKNLVPILHLLVSLALGLPRWSNTKWSVESIHSKNLVPILHLLVSLVR 227 (526)
Q Consensus 158 ~v~~~l~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~s~~kwsv~~I~~knl~ail~LLVaLa~ 227 (526)
+..+.+|+++.. +-++ ++-.-.||+..++.-|.||++
T Consensus 84 ~~~~~~g~~~~~---------------------------~f~~------~Dl~~~~~~~~V~~~l~~l~~ 120 (587)
T 3ky9_A 84 TCCEKFGLKRSE---------------------------LFEA------FDLFDVQDFGKVIYTLSALSW 120 (587)
T ss_dssp HHHHTTCCCTTS---------------------------SCCH------HHHHTCSCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHH---------------------------cCCc------hhhhccCCcchHHHHHHHHhh
Confidence 987779998744 1222 233457888888888888876
No 63
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.71 E-value=0.69 Score=42.85 Aligned_cols=69 Identities=20% Similarity=0.361 Sum_probs=50.0
Q ss_pred HHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHc--cCccc-ccceecChHHHHHHHHHHHHHHHHHcCCCC
Q psy2679 94 FVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLN--QEKLD-VPEVTQSEEGQKQKLAIVLEAVNKALGLPR 167 (526)
Q Consensus 94 ~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~--~~kl~-v~ev~~s~~~qkqkl~~vl~~v~~~l~~~~ 167 (526)
..|++|||+.|... +..+ |+|-||.++-+|+.+|. .+.|. |.--+-++-.+.++.....++.++ +|++.
T Consensus 25 ~ElL~WIN~~L~~~---~~ki-E~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~af~k-~gV~k 96 (159)
T 1wyo_A 25 HDMLAWVNDSLHLN---YTKI-EQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKK-MGVDK 96 (159)
T ss_dssp HHHHHHHHHHSCCC---CSSG-GGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHHHHHH-HTCCC
T ss_pred HHHHHHHHHHHCCC---Cchh-hhcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHHHHHH-cCCCC
Confidence 46889999999665 2333 69999999999999996 34432 222455667888999888887754 45554
No 64
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.73 E-value=0.44 Score=44.18 Aligned_cols=73 Identities=19% Similarity=0.311 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhcccCcccccccccccccce-----------eeeccccccCCCChhhhHhcHHHHHHHHHHcCCCCCC
Q psy2679 350 VKKSLITFVNKHLAKVNLEVTDLDTQFHDGGF-----------FVPLHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPK 418 (526)
Q Consensus 350 VKkTf~~FVNkHL~KlnL~VtDLetqFaDGgy-----------FIpL~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~ 418 (526)
-++-++.|||.-| ++.++-+| +++||.- -|||++..-++....+.++|...-.+.+++.||++ .
T Consensus 23 sr~ElL~WIN~~L---~~~~~kiE-~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~af~k~gV~k-~ 97 (159)
T 1wyo_A 23 SRHDMLAWVNDSL---HLNYTKIE-QLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDK-I 97 (159)
T ss_dssp CHHHHHHHHHHHS---CCCCSSGG-GGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHHHHHHHTCCC-C
T ss_pred hHHHHHHHHHHHH---CCCCchhh-hcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHHHHHHcCCCC-c
Confidence 4578999999887 56677777 9999922 26788887788899999999999999999999975 4
Q ss_pred CCChhhhcc
Q psy2679 419 ARPEDEFAK 427 (526)
Q Consensus 419 IspeDIvag 427 (526)
|..+.++.|
T Consensus 98 ipV~kLvkg 106 (159)
T 1wyo_A 98 IPVEKLVKG 106 (159)
T ss_dssp CCHHHHTTT
T ss_pred cCHHHHhcC
Confidence 555544444
No 65
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=88.98 E-value=0.29 Score=46.30 Aligned_cols=78 Identities=10% Similarity=0.221 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHhhcccCcc-cccccccccccceeee---------ccccccCCCChhhhHhcHHHHHHHHHHcCCCCCC-
Q psy2679 350 VKKSLITFVNKHLAKVNLE-VTDLDTQFHDGGFFVP---------LHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPK- 418 (526)
Q Consensus 350 VKkTf~~FVNkHL~KlnL~-VtDLetqFaDGgyFIp---------L~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~- 418 (526)
..+.+..|++.-|.. .+. ..|+...++||..++- ..++|.++....+..+|++..++..++.|++...
T Consensus 56 ~~~e~~~WIe~~l~~-~l~~~~~f~~~LrDGvvLCkLiN~l~P~sv~kI~~~s~~~f~~~eNI~~FL~ac~~~Gvp~~~l 134 (203)
T 1p5s_A 56 RVDEAKKWIEECLGT-DLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIHGIGLPEIFH 134 (203)
T ss_dssp HHHHHHHHHHHHHTS-CCCCGGGHHHHHTTSHHHHHHHHHHCTTSCCCCCCCSSSCCCHHHHHHHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHHHHHhCC-CCCChHHHHHHHcchHHHHHHHHHhCCCCcccccCCCCCcchHHHHHHHHHHHHHHcCCCcccc
Confidence 468899999998763 333 4689999999955552 3345555666778999999999999999998876
Q ss_pred CCChhhhccc
Q psy2679 419 ARPEDEFAKH 428 (526)
Q Consensus 419 IspeDIvagd 428 (526)
..+.|++.+.
T Consensus 135 F~t~DL~e~k 144 (203)
T 1p5s_A 135 FELTDIYEGK 144 (203)
T ss_dssp CCHHHHHSCS
T ss_pred cCHHHHHhcC
Confidence 4999999864
No 66
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=88.28 E-value=0.47 Score=42.54 Aligned_cols=75 Identities=15% Similarity=0.216 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhhcccCcccccccccccccceeeec---------cccccCCCChhhhHhcHHHHHHHHHHcCCCCCC-C
Q psy2679 350 VKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPL---------HDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPK-A 419 (526)
Q Consensus 350 VKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL---------~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~-I 419 (526)
.++.+..|+|.-|.. .+ -.|+...+.||..++-| .+++ .+....+..+|++..++..++.|++... .
T Consensus 18 ~~~e~~~WIe~~l~~-~i-~~~l~~~L~DGvvLCkL~N~l~P~~v~kin-~~~~~f~~~eNI~~FL~a~~~~Gv~~~~lF 94 (146)
T 1wyn_A 18 KEAELRTWIEGLTGL-SI-GPDFQKGLKDGTILCTLMNKLQPGSVPKIN-RSMQNWHQLENLSNFIKAMVSYGMNPVDLF 94 (146)
T ss_dssp HHHHHHHHHHHHHCC-CC-CSCHHHHHHTTSHHHHHHHHHCTTSCSCCC-CSSCHHHHHHHHHHHHHHHHHHTCCSSSCC
T ss_pred HHHHHHHHHHHHhCC-CC-cHHHHHHHccHHHHHHHHHHhCCCCccccc-cccccccHHHHHHHHHHHHHHcCCCccccc
Confidence 457889999998863 33 36888899999555532 2333 2346678899999999999999998876 8
Q ss_pred CChhhhcc
Q psy2679 420 RPEDEFAK 427 (526)
Q Consensus 420 speDIvag 427 (526)
.+.|++.+
T Consensus 95 ~~~DL~e~ 102 (146)
T 1wyn_A 95 EANDLFES 102 (146)
T ss_dssp CHHHHHTC
T ss_pred ChhHHHhc
Confidence 99999875
No 67
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=88.00 E-value=0.97 Score=41.50 Aligned_cols=73 Identities=19% Similarity=0.254 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhhcccCcccccccccccccce----------eeeccccccCCCChhhhHhcHHHHHHHHHHcCCCCCCCC
Q psy2679 351 KKSLITFVNKHLAKVNLEVTDLDTQFHDGGF----------FVPLHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPKAR 420 (526)
Q Consensus 351 KkTf~~FVNkHL~KlnL~VtDLetqFaDGgy----------FIpL~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~Is 420 (526)
+..++.|||.-|. +.++.+| |+++|.- =|||++-.-.+....+.++|...-.+-+++.||.+. |.
T Consensus 8 R~eLL~WiN~~L~---~n~tkIE-~l~sGAaYCQlmD~lfg~i~l~kVkf~a~~e~e~i~NfKlLQ~~F~k~~I~k~-ip 82 (145)
T 4abo_I 8 RQELLAWINQVTS---LGLTRIE-DCGKGYAMIQIFDSIYQDIPLKKVNFECNNEYQYINNWKVLQQVFLKKGIDKV-VD 82 (145)
T ss_dssp HHHHHHHHHHHHT---CCCCSGG-GGGGSHHHHHHHHHHHCCSCTTTSCSSCCSHHHHHHHHHHHHHHHHHHTCCCC-CC
T ss_pred HHHHHHHHHHHcC---CCcchHH-HccccHHHHHHHHHHhcCcchhhcccCCCCHHHHHHHHHHHHHHHHHcCCCCc-cC
Confidence 4679999999875 5667777 8889921 168888888888999999999999999999999664 66
Q ss_pred Chhhhccc
Q psy2679 421 PEDEFAKH 428 (526)
Q Consensus 421 peDIvagd 428 (526)
.+.++.|.
T Consensus 83 V~kLvKgk 90 (145)
T 4abo_I 83 PERLSRCK 90 (145)
T ss_dssp HHHHTTTC
T ss_pred HHHHhccc
Confidence 55555554
No 68
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=87.17 E-value=0.46 Score=42.09 Aligned_cols=75 Identities=9% Similarity=0.191 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhhcccCcccccccccccccceeee---------ccccccCCCChhhhHhcHHHHHHHHHHcCCCCCC-C
Q psy2679 350 VKKSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVP---------LHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPK-A 419 (526)
Q Consensus 350 VKkTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIp---------L~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~-I 419 (526)
.++.+..|+|.-|.. .+ -.|+...++||..++- ..+++ +|....+..+|++..++..++.|++... .
T Consensus 18 ~~~e~~~WIe~~l~~-~~-~~~l~~~L~DGvvLCkL~N~l~P~~v~ki~-~~~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF 94 (136)
T 1wyp_A 18 REQELREWIEGVTGR-RI-GNNFMDGLKDGIILCEFINKLQPGSVKKIN-ESTQNWHQLENIGNFIKAITKYGVKPHDIF 94 (136)
T ss_dssp HHHHHHHHHHHHTCC-CC-CSCTTHHHHTSHHHHHHHHHHSTTSSSCCC-CSSCSHHHHHHHHHHHHHHHHHTCCGGGCC
T ss_pred HHHHHHHHHHHHhCC-CC-cHHHHHHHccHHhHHHHHHhhCCCCccccc-ccccchHHHHHHHHHHHHHHHcCCCccccc
Confidence 457899999998863 33 2688889999955552 23343 2445678899999999999999998765 8
Q ss_pred CChhhhcc
Q psy2679 420 RPEDEFAK 427 (526)
Q Consensus 420 speDIvag 427 (526)
.+.|++.+
T Consensus 95 ~~~DL~e~ 102 (136)
T 1wyp_A 95 EANDLFEN 102 (136)
T ss_dssp CHHHHHSC
T ss_pred CchHHhcC
Confidence 89999975
No 69
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=87.05 E-value=0.34 Score=41.12 Aligned_cols=73 Identities=12% Similarity=0.258 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhcccCcccccccccccccceeee---------ccccccCCCChhhhHhcHHHHHHHHHHcCCCCCC-CCC
Q psy2679 352 KSLITFVNKHLAKVNLEVTDLDTQFHDGGFFVP---------LHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPK-ARP 421 (526)
Q Consensus 352 kTf~~FVNkHL~KlnL~VtDLetqFaDGgyFIp---------L~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~-Isp 421 (526)
+.+..|+|.-|.. .+ -.|+...++||..++- ..+++ .+....+..+|++..++..++.|++... ..+
T Consensus 6 ~e~~~WIe~~l~~-~~-~~~l~~~L~dGvvLCkL~N~l~P~~v~ki~-~~~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF~~ 82 (108)
T 1h67_A 6 RQLRVWIEGATGR-RI-GDNFMDGLKDGVILCELINKLQPGSVQKVN-DPVQNWHKLENIGNFLRAIKHYGVKPHDIFEA 82 (108)
T ss_dssp HHHHHHHHHHHSC-CC-CSCHHHHHHHCSHHHHHHHHHSTTSSTTCC-CTTSSHHHHHHHHHHHHHHHHHTSCGGGSCCH
T ss_pred HHHHHHHHHHhCC-CC-cHHHHHHHccHHHHHHHHHHhCCCCccccc-ccccchHHHHHHHHHHHHHHHcCCCcccccCh
Confidence 5678999988763 33 2588888999955542 22333 2445678899999999999999998875 899
Q ss_pred hhhhcc
Q psy2679 422 EDEFAK 427 (526)
Q Consensus 422 eDIvag 427 (526)
.|++.+
T Consensus 83 ~DL~e~ 88 (108)
T 1h67_A 83 NDLFEN 88 (108)
T ss_dssp HHHHHT
T ss_pred hHHHhC
Confidence 999975
No 70
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=84.94 E-value=0.79 Score=41.56 Aligned_cols=77 Identities=10% Similarity=0.239 Sum_probs=58.8
Q ss_pred HHHHHHHHHHhhcccCcc-cccccccccccceeee---------ccccccCCCChhhhHhcHHHHHHHHHHcCCCCCCC-
Q psy2679 351 KKSLITFVNKHLAKVNLE-VTDLDTQFHDGGFFVP---------LHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPKA- 419 (526)
Q Consensus 351 KkTf~~FVNkHL~KlnL~-VtDLetqFaDGgyFIp---------L~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~I- 419 (526)
.+.+..|++.-|.. .+. -.|+..-+.||..++- ..+++..+....+..+||+.-++..++.|++...+
T Consensus 13 ~~e~~~WIe~~l~~-~l~~~~~l~~~LkdGvvLCkL~N~l~P~~i~kI~~~~~~~f~~~eNI~~FL~a~~~~Gv~~~~lF 91 (159)
T 1p2x_A 13 VDEAKKWIEECLGT-DLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIHGIGLPEIFHF 91 (159)
T ss_dssp HHHHHHHHHHHHTS-CCCCGGGHHHHTTTSHHHHHHHHHHCTTSCCCCCCCSSCCTTHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred HHHHHHHHHHHhCC-CCCChHHHHHHHcchHHHHHHHHHhCCCCccccccccCCcchHHHHHHHHHHHHHHcCCCccccc
Confidence 36788999998863 333 3588899999955542 34455555667788999999999999999988776
Q ss_pred CChhhhccc
Q psy2679 420 RPEDEFAKH 428 (526)
Q Consensus 420 speDIvagd 428 (526)
.+.|++.+.
T Consensus 92 ~~~DL~e~k 100 (159)
T 1p2x_A 92 ELTDIYEGK 100 (159)
T ss_dssp CHHHHSSCS
T ss_pred CHHHHHhcC
Confidence 899999864
No 71
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=84.68 E-value=2.1 Score=38.35 Aligned_cols=72 Identities=14% Similarity=0.193 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhhcccCcccccccccccccce----------eeeccccccCCCChhhhHhcHHHHHHHHHHcCCCCCCCC
Q psy2679 351 KKSLITFVNKHLAKVNLEVTDLDTQFHDGGF----------FVPLHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPKAR 420 (526)
Q Consensus 351 KkTf~~FVNkHL~KlnL~VtDLetqFaDGgy----------FIpL~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~Is 420 (526)
+..|+.|+|+-|. +.++-+| |.++|.- =|||++-...+.+..+.++|...-.+-+.+.|+.+ .|.
T Consensus 12 R~elL~WiN~~L~---~n~~kiE-el~tGaayCQl~d~l~g~v~l~kVkf~a~~e~e~~~N~k~LQ~~f~k~~I~k-~ip 86 (127)
T 2qjx_A 12 RTELLTWLNGLLN---LNYKKIE-ECGTGAAYCQIMDSIYGDLPMNRVKFNATAEYEFQTNYKILQSCFSRHGIEK-TVY 86 (127)
T ss_dssp HHHHHHHHHHHHT---CCCCSGG-GGGGSHHHHHHHHHHHCCSCGGGSCTTCCSHHHHHHHHHHHHHHHHHTTCCC-CCC
T ss_pred HHHHHHHHHHHHc---CCccHHH-HccchHHHHHHHhhhccccCccccCCCCCCHHHHHHHHHHHHHHHHHcCCCC-ccC
Confidence 5789999999876 3455555 6688821 16888888888999999999999999999999964 355
Q ss_pred Chhhhcc
Q psy2679 421 PEDEFAK 427 (526)
Q Consensus 421 peDIvag 427 (526)
.+.++.|
T Consensus 87 V~kLvKg 93 (127)
T 2qjx_A 87 VDKLIRC 93 (127)
T ss_dssp HHHHTTT
T ss_pred HHHHhcc
Confidence 4444444
No 72
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=83.81 E-value=0.72 Score=40.15 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhc--ccCc----ccccccccccccceeee---------ccccccCCCChhhhHhcHHHHHHHHHHcCCCC
Q psy2679 352 KSLITFVNKHLA--KVNL----EVTDLDTQFHDGGFFVP---------LHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAK 416 (526)
Q Consensus 352 kTf~~FVNkHL~--KlnL----~VtDLetqFaDGgyFIp---------L~~f~LtP~~~~qKLhNVslALELLqd~GL~k 416 (526)
+.+.+|+|+=+. .-+. ..++|...++||..++- ..+.+..|.+..+..+|++..++..++.|+
T Consensus 9 ~e~~~WI~~~~~l~~~~~~~~~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~ki~~~~~~~f~~~eNI~~FL~a~~~~g~-- 86 (121)
T 1wyr_A 9 EQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVEKFCLDPQTEADCINNINDFLKGCATLQV-- 86 (121)
T ss_dssp HHHHHHHHHHTSSCCCSSCCSCHHHHHHHHHHHSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHhcCcCCcccCCCCcHHHHHHHHccHHHHHHHHHHhCCCCCCcCCCCCcchHHHHHHHHHHHHHHHHcCC--
Confidence 568899998632 1111 12236778899954442 335566677778999999999999999997
Q ss_pred CCCCChhhhcc
Q psy2679 417 PKARPEDEFAK 427 (526)
Q Consensus 417 ~~IspeDIvag 427 (526)
....+.|++.+
T Consensus 87 ~~F~~~DL~e~ 97 (121)
T 1wyr_A 87 EIFDPDDLYSG 97 (121)
T ss_dssp CCCCHHHHHTC
T ss_pred CccCHHHHHcC
Confidence 67889999986
No 73
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=83.43 E-value=1.9 Score=42.98 Aligned_cols=74 Identities=15% Similarity=0.288 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhhcccCccccccccccccc---------ce--eeeccccccCCCChhhhHhcHHHHHHHHHHcCCCCCCC
Q psy2679 351 KKSLITFVNKHLAKVNLEVTDLDTQFHDG---------GF--FVPLHDFYLTPQTFEQKVHNVAFAFQLMQDVGLAKPKA 419 (526)
Q Consensus 351 KkTf~~FVNkHL~KlnL~VtDLetqFaDG---------gy--FIpL~~f~LtP~~~~qKLhNVslALELLqd~GL~k~~I 419 (526)
++-++.|||.-|. +.++-+| |+++| .| -|||++-...+....+.++|...-.+-+.+.||.+ .|
T Consensus 17 R~elL~WiN~~L~---~~~~kiE-el~tGaayCQlmd~l~P~~i~l~kVkf~a~~e~e~i~N~k~LQ~~F~k~~I~k-~i 91 (268)
T 2r8u_A 17 RHDMLAWINESLQ---LNLTKIE-QLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDK-II 91 (268)
T ss_dssp HHHHHHHHHHHHT---CCCCCGG-GGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHTTCCC-CC
T ss_pred HHHHHHHHHHHhc---CCcchHH-HcccchHHHHHHHHHccCCCchhhccCCCCCHHHHHHHHHHHHHHHHHcCCCC-cc
Confidence 4789999999876 5677777 88899 22 36888888889999999999999999999999965 67
Q ss_pred CChhhhcccc
Q psy2679 420 RPEDEFAKHA 429 (526)
Q Consensus 420 speDIvagda 429 (526)
..+.++.|.-
T Consensus 92 pV~kLvkgk~ 101 (268)
T 2r8u_A 92 PVDKLVKGKF 101 (268)
T ss_dssp CHHHHTTTCH
T ss_pred CHHHHhccCc
Confidence 7777777753
No 74
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=81.77 E-value=2.2 Score=38.08 Aligned_cols=76 Identities=13% Similarity=0.269 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhcccCcc-----cccccccccccceee-------e-----cc-ccccCCCChhhhHhcHHHHHHHHHH
Q psy2679 350 VKKSLITFVNKHLAKVNLE-----VTDLDTQFHDGGFFV-------P-----LH-DFYLTPQTFEQKVHNVAFAFQLMQD 411 (526)
Q Consensus 350 VKkTf~~FVNkHL~KlnL~-----VtDLetqFaDGgyFI-------p-----L~-~f~LtP~~~~qKLhNVslALELLqd 411 (526)
.++.+..|++.-|.. .+. -.|+..-++||..++ | +. +++ .+....+..+||+.-++..++
T Consensus 10 ~e~e~~~WIe~~l~~-~l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~~kin-~~~~~f~~~eNI~~FL~ac~~ 87 (144)
T 1ujo_A 10 LEERLVEWIVVQCGP-DVGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVKVPEN-PPSMVFKQMEQVAQFLKAAED 87 (144)
T ss_dssp HHHHHHHHHHHHHCT-TTCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSCCCSS-CCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CCCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcceeec-CCCchhHHHHHHHHHHHHHHH
Confidence 456788999988763 232 368899999994444 3 12 333 344677889999999999999
Q ss_pred cCCCCCCC-CChhhhcc
Q psy2679 412 VGLAKPKA-RPEDEFAK 427 (526)
Q Consensus 412 ~GL~k~~I-speDIvag 427 (526)
.|+....+ .+.|++.+
T Consensus 88 ~Gv~~~~lF~t~DL~e~ 104 (144)
T 1ujo_A 88 YGVIKTDMFQTVDLYEG 104 (144)
T ss_dssp HTCCSSSCCCHHHHHTC
T ss_pred cCcCccccCChhHHHhc
Confidence 99988777 89999876
No 75
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=81.50 E-value=0.71 Score=41.68 Aligned_cols=76 Identities=12% Similarity=0.258 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHhhcccCccc-----ccccccccccceeeec------------cccccCCCChhhhHhcHHHHHHHHHHc
Q psy2679 350 VKKSLITFVNKHLAKVNLEV-----TDLDTQFHDGGFFVPL------------HDFYLTPQTFEQKVHNVAFAFQLMQDV 412 (526)
Q Consensus 350 VKkTf~~FVNkHL~KlnL~V-----tDLetqFaDGgyFIpL------------~~f~LtP~~~~qKLhNVslALELLqd~ 412 (526)
.++.+..|++.-|.. .+.. .|+..-+.||..++-| .+++ .+....+..+||+.-+...++.
T Consensus 18 ~e~e~~~WIe~~l~~-~l~~~~~~~~~~~~~LkDGvvLCkL~N~l~P~~~~~i~kIn-~~~~~F~~~eNI~~FL~ac~~~ 95 (155)
T 1wym_A 18 LEQILIQWITTQCRK-DVGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVKKIQ-ASTMAFKQMEQISQFLQAAERY 95 (155)
T ss_dssp HHHHHHHHHHHHSSS-CCCCCCSSHHHHHHHHHTSHHHHHHHHHHSCTTTCSCCCCC-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CCCCCcccHHHHHHHHcchHHHHHHHHHhccccCCCcCccc-CCCccccHHHHHHHHHHHHHHc
Confidence 457889999988764 3443 5888889999555532 2232 2456778899999999999999
Q ss_pred CCCCCCC-CChhhhcc
Q psy2679 413 GLAKPKA-RPEDEFAK 427 (526)
Q Consensus 413 GL~k~~I-speDIvag 427 (526)
|+....+ .+.|++.+
T Consensus 96 Gv~~~~lF~t~DL~e~ 111 (155)
T 1wym_A 96 GINTTDIFQTVDLWEG 111 (155)
T ss_dssp TCCTTTCCCHHHHHTC
T ss_pred CCCccccCChHHHHhc
Confidence 9998877 89999875
No 76
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=79.82 E-value=1.5 Score=38.54 Aligned_cols=77 Identities=12% Similarity=0.174 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHh--hcccCcc---cccc-cccccccceeee---------ccccccCCCChhhhHhcHHHHHHHHHH-c
Q psy2679 349 VVKKSLITFVNKH--LAKVNLE---VTDL-DTQFHDGGFFVP---------LHDFYLTPQTFEQKVHNVAFAFQLMQD-V 412 (526)
Q Consensus 349 vVKkTf~~FVNkH--L~KlnL~---VtDL-etqFaDGgyFIp---------L~~f~LtP~~~~qKLhNVslALELLqd-~ 412 (526)
.-+..+.+|+|+= |...+.. -.|+ ..-++||..++- ..+.+..|.+..+..+|++.-++.+++ .
T Consensus 12 ~~~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~kI~~~~~~~f~~~eNI~~FL~a~~~~~ 91 (126)
T 2l3g_A 12 NSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESECLSNIREFLRGCGASL 91 (126)
T ss_dssp CHHHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCCccCCCCCcchHHHHHHHHHHHHHHHhC
Confidence 3567888999987 5543322 2343 577889954442 345566677778899999999999999 8
Q ss_pred CCCCCCCCChhhhcc
Q psy2679 413 GLAKPKARPEDEFAK 427 (526)
Q Consensus 413 GL~k~~IspeDIvag 427 (526)
|+ ....+.|++.+
T Consensus 92 g~--~lF~t~DL~e~ 104 (126)
T 2l3g_A 92 RL--ETFDANDLYQG 104 (126)
T ss_dssp CC--CCCCHHHHHTT
T ss_pred CC--CccCHHHHHhC
Confidence 86 66799999976
No 77
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=71.29 E-value=3.6 Score=38.65 Aligned_cols=77 Identities=18% Similarity=0.311 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhhcccCcc-cccccccccccceee-----------ecccccc-------CCCChhhhHhcHHHHHHHHH
Q psy2679 350 VKKSLITFVNKHLAKVNLE-VTDLDTQFHDGGFFV-----------PLHDFYL-------TPQTFEQKVHNVAFAFQLMQ 410 (526)
Q Consensus 350 VKkTf~~FVNkHL~KlnL~-VtDLetqFaDGgyFI-----------pL~~f~L-------tP~~~~qKLhNVslALELLq 410 (526)
..+.+..|++.-|.. .+. ..|+...++||..++ |..+.+. .|.......+||+.-+...+
T Consensus 48 ~~~e~~~WIe~~lg~-~l~~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~~~~~~~~~~~~F~~~eNI~~FL~ac~ 126 (193)
T 3i6x_A 48 HLEEAKRWMEACLGE-DLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMD 126 (193)
T ss_dssp HHHHHHHHHHHHHSS-CCCCGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTTTCHHHHHSCCCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CCCChHHHHHHhccHHHHHHHHHHHCCCCCCccccCCcccccccCcccchHHHHHHHHHHHHHH
Confidence 344788999998864 333 358999999995544 2223322 23455677999999999999
Q ss_pred HcCCCCCCC-CChhhhcc
Q psy2679 411 DVGLAKPKA-RPEDEFAK 427 (526)
Q Consensus 411 d~GL~k~~I-speDIvag 427 (526)
+.|++...+ .+.|++.+
T Consensus 127 ~~Gvp~~~lFet~DL~e~ 144 (193)
T 3i6x_A 127 EIGLPKIFYPETTDIYDR 144 (193)
T ss_dssp HHTCCGGGCCCHHHHHSC
T ss_pred HcCCCcccCCCcHHHhcC
Confidence 999987655 88898876
No 78
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.61 E-value=15 Score=32.60 Aligned_cols=74 Identities=16% Similarity=0.269 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccceecCh-HHHHHH-HHHHHHHHHHHcCCC
Q psy2679 91 ELIFVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEVTQSE-EGQKQK-LAIVLEAVNKALGLP 166 (526)
Q Consensus 91 el~~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev~~s~-~~qkqk-l~~vl~~v~~~l~~~ 166 (526)
|-.+.|..|+|+-=-+. -+|+++.|+-||..++.++.+.-..-++.-..+... ..+|.. -+++-+.|=+.|+++
T Consensus 15 ee~~el~~WL~~l~Ls~--~~rn~rRDFSdG~lvAEIl~~y~Pk~Vdlh~y~~~~S~~~K~~NW~~ln~kvl~kl~~~ 90 (127)
T 2ee7_A 15 EALHQLYLWVDNIPLSR--PKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLKRLNFS 90 (127)
T ss_dssp HHHHHHHHHHHHSCCSC--CSSCHHHHHTTSHHHHHHHHHHCTTTCCCSSCCCCSSHHHHHHHHHHHHHHTTGGGTCC
T ss_pred HHHHHHHHHHHcCCCCC--CCCchhhhccchhHHHHHHHHHCcCcccccccCCCCcHHHHHHhHHHHHHHHHHHcCCC
Confidence 44556779999533333 389999999999999999999988777777776644 444443 333222343445543
No 79
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=62.47 E-value=4.8 Score=37.50 Aligned_cols=76 Identities=18% Similarity=0.316 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhhcccCcc-cccccccccccceeeec-----------cccccC-------CCChhhhHhcHHHHHHHHHH
Q psy2679 351 KKSLITFVNKHLAKVNLE-VTDLDTQFHDGGFFVPL-----------HDFYLT-------PQTFEQKVHNVAFAFQLMQD 411 (526)
Q Consensus 351 KkTf~~FVNkHL~KlnL~-VtDLetqFaDGgyFIpL-----------~~f~Lt-------P~~~~qKLhNVslALELLqd 411 (526)
.+.+..|++.-+.. .+. ..|+..-+.||..++-| .+.|.. +.......+||+.-+...++
T Consensus 27 ~~e~~~WIe~~lg~-~lp~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~~~~~~~~~~~~f~~~eNI~~FL~ac~~ 105 (190)
T 2rr8_A 27 LEEAKRWMEACLGE-DLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDE 105 (190)
T ss_dssp HHHHHHHHHHHSCC-CCCCHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTTTCHHHHHTCCCSSTHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHhCC-CCCChhHHHHHHcchhhHHHHHHHhCCCCcccccccccccccccCCCCcchHHHHHHHHHHHHHH
Confidence 38899999988864 333 35888899999555432 222211 23445778999999999999
Q ss_pred cCCCCCCC-CChhhhcc
Q psy2679 412 VGLAKPKA-RPEDEFAK 427 (526)
Q Consensus 412 ~GL~k~~I-speDIvag 427 (526)
.|++...+ .+.|++.+
T Consensus 106 ~Gvp~~~lFet~DL~e~ 122 (190)
T 2rr8_A 106 IGLPKIFYPETTDIYDR 122 (190)
T ss_dssp TTCCSTTCCCHHHHTCT
T ss_pred cCCCccccCCHHHHHhc
Confidence 99988776 89999975
No 80
>1w8x_P Protein P16, protein S, GPS; virus, P3 major capsid protein, P30 TAPE measure, P31 penton protein, P16 membrane protein; 4.20A {Enterobacteria phage PRD1} SCOP: i.6.1.1
Probab=59.53 E-value=4.2 Score=35.27 Aligned_cols=31 Identities=13% Similarity=0.269 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhh-hccCcceEEeCCCCccc
Q psy2679 463 ILNCLWVLIVAVAF-MNSTAPVVRIPQKWMLP 493 (526)
Q Consensus 463 a~~vl~~l~~~liw-wYrk~PVf~LP~gWf~P 493 (526)
+.|+..++..+++| |||..|--.+-++|=.|
T Consensus 7 lywvggglvliliwlwfrnrpaaqvasnwegp 38 (117)
T 1w8x_P 7 LYWVGGGLVLILIWLWFRNRPAAQVASNWEGP 38 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCSSCTTCCC
T ss_pred EeEecCchhhHHHHHHHccChHHHHhhcCCCC
Confidence 45677888888877 89999999889999853
No 81
>3b8m_A Ferric enterobactin (enterochelin) transport; WZZ, FEPE, bacterial polysaccharide CO-polymerase, metal transport, biosynthetic protein; 2.70A {Escherichia coli} SCOP: d.58.60.1 PDB: 3b8n_A 4e2l_A
Probab=34.55 E-value=40 Score=32.97 Aligned_cols=52 Identities=13% Similarity=0.331 Sum_probs=40.8
Q ss_pred hhhhHhcHHHHHHHHHHcCCCCCCCCChhhhcccchh--hhhHHHHHHHHHHHh
Q psy2679 395 FEQKVHNVAFAFQLMQDVGLAKPKARPEDEFAKHARL--SRKISALQAQLEKEC 446 (526)
Q Consensus 395 ~~qKLhNVslALELLqd~GL~k~~IspeDIvagdaKL--tlkiDKL~eELEkln 446 (526)
+..+++++..|++.-+..||+++.++..+.++++.-- -+|-+.|.++++.+.
T Consensus 182 ~~~~I~rL~~AL~IA~aagI~kP~~~~~~~i~dd~~f~i~LGs~aL~akl~ilk 235 (280)
T 3b8m_A 182 LDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGADGIERKLEIEK 235 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSCCC------CCCSSSCCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccccccCCCchhhHHHhCHHHHHHHHHHHh
Confidence 4577999999999999999999999877777888888 999999999997554
No 82
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=27.58 E-value=1.8e+02 Score=26.68 Aligned_cols=68 Identities=18% Similarity=0.319 Sum_probs=44.1
Q ss_pred HHHHHHHhhhhccccccccchhhhhhhhHHHHHHHHHHccCcccccce---ecChHHHHHHHHHHHHHHHHHcCCCC
Q psy2679 94 FVLIEWINDELADQRIIVKDLEEDLYDGQILQKLLEKLNQEKLDVPEV---TQSEEGQKQKLAIVLEAVNKALGLPR 167 (526)
Q Consensus 94 ~~li~WiN~~L~~~riiVkdl~eDLyDG~vL~~Llekl~~~kl~v~ev---~~s~~~qkqkl~~vl~~v~~~l~~~~ 167 (526)
..|+.|||+.|.-. +..+ |+|-+|.+.-.|+..|-| .+...-| +.+|-.=.+|..++=++.++ ++++.
T Consensus 9 ~eLL~WiN~~L~~n---~tkI-E~l~sGAaYCQlmD~lfg-~i~l~kVkf~a~~e~e~i~NfKlLQ~~F~k-~~I~k 79 (145)
T 4abo_I 9 QELLAWINQVTSLG---LTRI-EDCGKGYAMIQIFDSIYQ-DIPLKKVNFECNNEYQYINNWKVLQQVFLK-KGIDK 79 (145)
T ss_dssp HHHHHHHHHHHTCC---CCSG-GGGGGSHHHHHHHHHHHC-CSCTTTSCSSCCSHHHHHHHHHHHHHHHHH-HTCCC
T ss_pred HHHHHHHHHHcCCC---cchH-HHccccHHHHHHHHHHhc-CcchhhcccCCCCHHHHHHHHHHHHHHHHH-cCCCC
Confidence 46899999999764 2333 679999999999988874 2433333 44455556666655444444 46554
No 83
>3uif_A Sulfonate ABC transporter, periplasmic sulfonate- protein SSUA; structural genomics; 2.60A {Methylobacillus flagellatus}
Probab=24.14 E-value=89 Score=29.45 Aligned_cols=86 Identities=10% Similarity=0.130 Sum_probs=56.6
Q ss_pred hhcCCChhHHHHHHHH---HHHHHH--hh-------cccCcccccccccccccceeeeccccccCCCChhhhHhcHHHHH
Q psy2679 339 LFDHHPDKLQVVKKSL---ITFVNK--HL-------AKVNLEVTDLDTQFHDGGFFVPLHDFYLTPQTFEQKVHNVAFAF 406 (526)
Q Consensus 339 lf~~~PeKl~vVKkTf---~~FVNk--HL-------~KlnL~VtDLetqFaDGgyFIpL~~f~LtP~~~~qKLhNVslAL 406 (526)
+.+.+||-+..+-+++ .+|+++ |- .+.|+....+...+..-.+ + ..+...|.....-...+....
T Consensus 210 ~~~~~p~~~~~~~~a~~~a~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~ 286 (348)
T 3uif_A 210 FVKQNPEITQAIVTAYLKSVHWVAQDENKETYIREYSNKIYPESVNRREYDQDNV--S-WRQRWSPLYDVALQEHYRKAV 286 (348)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHTSCTTSCHHHHHHTTTTCSS--C-TTGGGCCCCCHHHHHHHHHHH
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHhccccc--c-cccccCcCCCHHHHHHHHHHH
Confidence 4455888777766655 457777 53 3455555555554443221 0 113456666666677888889
Q ss_pred HHHHHcCCCCCCCCChhhhcc
Q psy2679 407 QLMQDVGLAKPKARPEDEFAK 427 (526)
Q Consensus 407 ELLqd~GL~k~~IspeDIvag 427 (526)
++|.+.|+-...++.+|.|+.
T Consensus 287 ~~l~~~G~i~~~~~~~~~~d~ 307 (348)
T 3uif_A 287 AYAQASGLTRTQADVQQMLNP 307 (348)
T ss_dssp HHHHHTTSCSSCCCHHHHBCT
T ss_pred HHHHHCCCCCCCCCHHHHhCH
Confidence 999999998888999999864
No 84
>4e29_A Chimeric WZZB chain length determinant protein; regulation of LPS O-antigen chain length, inner membran membrane protein; 1.60A {Shigella flexneri} PDB: 4e2c_A 4e2h_A 3b8p_A
Probab=22.75 E-value=89 Score=30.56 Aligned_cols=51 Identities=8% Similarity=0.263 Sum_probs=43.5
Q ss_pred ChhhhHhcHHHHHHHHHHcCCCCCCCCChhhhcccchhhhhHHHHHHHHHH
Q psy2679 394 TFEQKVHNVAFAFQLMQDVGLAKPKARPEDEFAKHARLSRKISALQAQLEK 444 (526)
Q Consensus 394 ~~~qKLhNVslALELLqd~GL~k~~IspeDIvagdaKLtlkiDKL~eELEk 444 (526)
.+..+++++..||+.-+..||+++.++..+.++.+.---+|-+.|.++++.
T Consensus 147 qr~~rI~rL~~AL~IA~aaGI~kP~~~~~q~lsdd~lF~LGs~aL~AkIe~ 197 (248)
T 4e29_A 147 QKDLRIRQIEEALRYADEAKITQPQIQQTQDVTQDTMFLLGSDALKSMIQN 197 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSCCCCSCCCCCTTTGGGGCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccccccCCCchhhhhhHHHHHHHHHH
Confidence 356789999999999999999999877666666666667999999999987
No 85
>2dsy_A Hypothetical protein TTHA0281; structural genomics, thermus thermophilus HB8, NPPSFA; HET: NHE; 1.90A {Thermus thermophilus} SCOP: d.304.1.2
Probab=22.21 E-value=1.2e+02 Score=24.60 Aligned_cols=68 Identities=13% Similarity=0.236 Sum_probs=48.4
Q ss_pred HHHHHHHHhhcccCcccccccccccccceeeecccc---ccCCCChhhhHhcHHHHHHHH----HHcCCCCCCCCChhhh
Q psy2679 353 SLITFVNKHLAKVNLEVTDLDTQFHDGGFFVPLHDF---YLTPQTFEQKVHNVAFAFQLM----QDVGLAKPKARPEDEF 425 (526)
Q Consensus 353 Tf~~FVNkHL~KlnL~VtDLetqFaDGgyFIpL~~f---~LtP~~~~qKLhNVslALELL----qd~GL~k~~IspeDIv 425 (526)
.|+.|+++-+++....|. + .||+|.+-..++ +..-.+.++-+.|+.-|+++. .+.|...+..+..++.
T Consensus 6 ~~~~y~~~aM~~~~Y~ii--~---edg~y~~~~Pdlpgc~t~G~T~eEA~~~a~eAl~~~le~~~e~g~~iP~p~~~~~~ 80 (87)
T 2dsy_A 6 TLTRYLEEAMARARYELI--A---DEEPYYGEIPDLPGVWATGKSLKECEANLQAALEDWLLFLLSRGETPPPLGEVRIE 80 (87)
T ss_dssp HHHHHHHHHHHTCEEEEC--S---SSSCEEEECTTSTTCEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCCBTTBCCC
T ss_pred HHHHHHHHHHHhceeEEE--e---cCCEEEEEECCCCCeeEeeCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCcccc
Confidence 588999999998888885 2 378888865443 444567888899998887764 4567777766554443
Done!