Query psy2680
Match_columns 178
No_of_seqs 161 out of 1192
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 22:26:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2680.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2680hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03211 GST_C_Metaxin2 GST_C f 99.9 1.9E-25 4E-30 167.7 11.4 121 1-131 6-126 (126)
2 cd03212 GST_C_Metaxin1_3 GST_C 99.9 3.8E-23 8.3E-28 157.4 10.8 125 1-135 7-137 (137)
3 KOG4244|consensus 99.8 1.7E-20 3.8E-25 154.7 9.4 108 27-138 171-278 (281)
4 KOG3028|consensus 99.8 4.9E-20 1.1E-24 155.1 11.9 127 1-138 111-239 (313)
5 KOG3027|consensus 99.8 1.6E-19 3.5E-24 144.5 10.8 114 21-137 139-252 (257)
6 PF13410 GST_C_2: Glutathione 99.3 6E-12 1.3E-16 83.7 7.4 66 58-129 4-69 (69)
7 cd03196 GST_C_5 GST_C family, 99.3 4.3E-11 9.3E-16 87.9 9.1 112 10-141 3-114 (115)
8 cd03193 GST_C_Metaxin GST_C fa 99.2 4.9E-11 1.1E-15 83.1 7.8 69 60-131 19-88 (88)
9 PF14497 GST_C_3: Glutathione 99.2 3E-11 6.6E-16 86.0 5.8 67 56-132 31-99 (99)
10 PF00043 GST_C: Glutathione S- 99.2 1E-10 2.2E-15 81.8 7.4 69 58-133 26-94 (95)
11 PF11801 Tom37_C: Tom37 C-term 99.2 6.4E-11 1.4E-15 93.2 6.4 96 1-104 18-156 (168)
12 PLN02473 glutathione S-transfe 99.1 2.8E-10 6.1E-15 91.1 9.8 77 60-144 135-211 (214)
13 cd03187 GST_C_Phi GST_C family 99.1 1.6E-10 3.5E-15 83.6 7.2 72 61-141 46-117 (118)
14 cd03180 GST_C_2 GST_C family, 99.1 1.9E-10 4.1E-15 82.1 7.1 68 60-138 43-110 (110)
15 cd03209 GST_C_Mu GST_C family, 99.1 4.3E-10 9.3E-15 82.8 8.7 77 61-147 36-112 (121)
16 cd03177 GST_C_Delta_Epsilon GS 99.1 3.1E-10 6.7E-15 82.9 7.9 76 57-142 35-110 (118)
17 cd03188 GST_C_Beta GST_C famil 99.1 3E-10 6.6E-15 81.6 7.5 71 60-141 43-113 (114)
18 cd03198 GST_C_CLIC GST_C famil 99.1 1.7E-10 3.6E-15 87.8 6.3 81 58-144 27-124 (134)
19 cd03201 GST_C_DHAR GST_C famil 99.1 6.5E-10 1.4E-14 82.6 8.7 81 58-143 28-109 (121)
20 cd03186 GST_C_SspA GST_N famil 99.1 4.9E-10 1.1E-14 80.3 7.7 72 59-140 34-105 (107)
21 cd03181 GST_C_EFB1gamma GST_C 99.1 5.5E-10 1.2E-14 81.6 7.7 79 59-145 39-117 (123)
22 cd03207 GST_C_8 GST_C family, 99.1 4.5E-10 9.8E-15 79.9 7.0 74 58-143 28-101 (103)
23 cd03202 GST_C_etherase_LigE GS 99.1 5.8E-10 1.3E-14 83.0 7.5 69 57-132 55-123 (124)
24 cd03206 GST_C_7 GST_C family, 99.1 7.9E-10 1.7E-14 78.6 7.5 70 58-138 31-100 (100)
25 cd03190 GST_C_ECM4_like GST_C 99.0 6.9E-10 1.5E-14 84.4 7.5 81 59-143 36-117 (142)
26 cd03189 GST_C_GTT1_like GST_C 99.0 7.6E-10 1.7E-14 80.5 7.4 64 61-133 55-118 (119)
27 cd03185 GST_C_Tau GST_C family 99.0 7.4E-10 1.6E-14 81.2 7.1 81 59-143 34-114 (126)
28 KOG0867|consensus 99.0 5.5E-10 1.2E-14 91.4 7.0 125 6-145 85-210 (226)
29 cd03178 GST_C_Ure2p_like GST_C 99.0 6.7E-10 1.4E-14 80.0 6.5 73 59-141 39-111 (113)
30 cd03210 GST_C_Pi GST_C family, 99.0 2.1E-09 4.6E-14 79.8 9.3 78 60-147 35-115 (126)
31 cd03204 GST_C_GDAP1 GST_C fami 99.0 1.3E-09 2.7E-14 80.4 7.6 73 60-138 29-111 (111)
32 PLN02395 glutathione S-transfe 99.0 1.4E-09 3.1E-14 86.9 8.5 77 61-145 135-211 (215)
33 cd03183 GST_C_Theta GST_C fami 99.0 1.6E-09 3.4E-14 79.8 7.8 73 61-143 46-121 (126)
34 cd03184 GST_C_Omega GST_C fami 99.0 1.1E-09 2.3E-14 81.0 6.6 82 57-143 29-112 (124)
35 cd03208 GST_C_Alpha GST_C fami 99.0 1.5E-09 3.3E-14 82.2 7.3 74 64-147 43-118 (137)
36 PRK13972 GSH-dependent disulfi 99.0 1.8E-09 3.8E-14 86.8 7.9 75 62-147 134-208 (215)
37 cd03182 GST_C_GTT2_like GST_C 99.0 2.7E-09 5.9E-14 77.3 8.0 67 59-133 48-114 (117)
38 cd03203 GST_C_Lambda GST_C fam 98.9 3.6E-09 7.8E-14 78.1 7.7 72 65-143 35-110 (120)
39 cd00299 GST_C_family Glutathio 98.9 3E-09 6.6E-14 73.8 6.9 67 58-130 34-100 (100)
40 cd03191 GST_C_Zeta GST_C famil 98.9 3.6E-09 7.8E-14 77.4 7.6 70 62-142 46-117 (121)
41 PRK09481 sspA stringent starva 98.9 3.8E-09 8.3E-14 84.8 7.5 76 59-143 126-201 (211)
42 PRK10542 glutathionine S-trans 98.9 4.5E-09 9.7E-14 83.1 7.0 73 61-144 125-197 (201)
43 PTZ00057 glutathione s-transfe 98.9 5.1E-09 1.1E-13 83.8 7.4 77 61-147 124-202 (205)
44 PRK10387 glutaredoxin 2; Provi 98.9 4.1E-09 8.9E-14 83.9 6.2 63 60-133 142-204 (210)
45 TIGR01262 maiA maleylacetoacet 98.9 1E-08 2.3E-13 81.5 8.0 73 62-145 131-205 (210)
46 cd03200 GST_C_JTV1 GST_C famil 98.8 9.9E-09 2.1E-13 73.3 6.2 57 64-132 39-95 (96)
47 cd03179 GST_C_1 GST_C family, 98.8 9.2E-09 2E-13 72.8 5.7 63 60-131 43-105 (105)
48 cd03192 GST_C_Sigma_like GST_C 98.8 1.3E-08 2.8E-13 72.4 6.0 63 61-130 40-104 (104)
49 cd03195 GST_C_4 GST_C family, 98.8 3E-08 6.6E-13 72.5 7.3 71 58-142 40-111 (114)
50 PLN02378 glutathione S-transfe 98.7 1.8E-08 3.8E-13 81.3 6.1 79 59-142 117-197 (213)
51 PRK11752 putative S-transferas 98.7 2.7E-08 5.9E-13 83.1 7.3 80 61-145 179-259 (264)
52 TIGR00862 O-ClC intracellular 98.7 4.4E-08 9.5E-13 81.0 7.3 80 59-144 122-220 (236)
53 cd03194 GST_C_3 GST_C family, 98.7 7.5E-08 1.6E-12 70.6 7.3 71 58-142 39-112 (114)
54 PRK10357 putative glutathione 98.7 8.1E-08 1.8E-12 76.1 7.6 73 61-142 126-198 (202)
55 cd03197 GST_C_mPGES2 GST_C fam 98.7 7.3E-08 1.6E-12 74.5 6.9 59 68-133 88-146 (149)
56 COG0625 Gst Glutathione S-tran 98.6 9.7E-08 2.1E-12 76.4 7.7 68 60-138 131-198 (211)
57 PLN02817 glutathione dehydroge 98.6 4.6E-08 9.9E-13 82.1 5.9 77 61-143 172-250 (265)
58 TIGR02182 GRXB Glutaredoxin, G 98.6 3.6E-08 7.7E-13 79.4 4.5 63 59-133 140-203 (209)
59 PRK15113 glutathione S-transfe 98.6 1.7E-07 3.8E-12 75.3 7.8 75 59-147 136-211 (214)
60 cd03205 GST_C_6 GST_C family, 98.5 5E-07 1.1E-11 63.9 6.8 62 60-130 37-98 (98)
61 KOG0406|consensus 98.4 2.2E-06 4.7E-11 70.6 8.4 83 54-139 123-206 (231)
62 PLN02907 glutamate-tRNA ligase 98.3 9.5E-07 2.1E-11 83.4 6.8 66 64-137 94-159 (722)
63 KOG4420|consensus 98.0 1.2E-05 2.6E-10 67.2 6.4 74 61-141 206-284 (325)
64 COG0435 ECM4 Predicted glutath 98.0 2.5E-06 5.4E-11 71.7 2.2 83 60-146 205-288 (324)
65 KOG1695|consensus 97.8 0.0001 2.2E-09 60.0 7.3 74 65-147 128-203 (206)
66 KOG0868|consensus 97.6 0.00014 3.1E-09 57.9 5.4 77 58-145 130-208 (217)
67 KOG2903|consensus 97.5 6.1E-05 1.3E-09 63.0 2.2 83 61-145 204-289 (319)
68 KOG3029|consensus 96.9 0.0033 7.1E-08 53.4 6.8 50 77-133 306-355 (370)
69 KOG1422|consensus 96.7 0.0024 5.2E-08 51.9 4.1 74 61-140 124-201 (221)
70 PF04399 Glutaredoxin2_C: Glut 96.6 0.011 2.5E-07 44.8 7.5 65 58-133 57-121 (132)
71 PF14834 GST_C_4: Glutathione 96.5 0.013 2.9E-07 43.3 7.0 72 58-143 41-113 (117)
72 cd03199 GST_C_GRX2 GST_C famil 95.9 0.049 1.1E-06 41.1 7.4 64 59-133 59-122 (128)
73 KOG1147|consensus 93.1 0.035 7.6E-07 51.0 0.7 70 65-146 93-162 (712)
74 KOG1668|consensus 80.8 1.7 3.8E-05 35.9 3.1 55 66-133 10-64 (231)
75 COG2999 GrxB Glutaredoxin 2 [P 74.1 9.7 0.00021 30.7 5.5 65 58-133 140-204 (215)
76 PF08628 Nexin_C: Sorting nexi 64.6 17 0.00037 26.1 4.8 42 119-168 36-77 (113)
77 TIGR03685 L21P_arch 50S riboso 46.2 61 0.0013 23.5 5.0 20 123-145 38-57 (105)
78 PF06972 DUF1296: Protein of u 32.3 87 0.0019 20.5 3.5 39 42-81 6-48 (60)
79 PF11329 DUF3131: Protein of u 30.6 3.9E+02 0.0084 23.8 8.8 89 42-146 38-146 (367)
80 PRK07122 RNA polymerase sigma 30.2 2.4E+02 0.0052 23.3 6.9 77 8-92 67-149 (264)
81 KOG4107|consensus 27.5 2.5E+02 0.0054 20.6 6.2 77 50-130 34-118 (125)
82 COG3959 Transketolase, N-termi 22.7 4.6E+02 0.0099 21.9 7.7 75 82-157 32-108 (243)
83 COG2918 GshA Gamma-glutamylcys 22.7 50 0.0011 30.3 1.5 22 5-26 129-150 (518)
No 1
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.93 E-value=1.9e-25 Score=167.72 Aligned_cols=121 Identities=26% Similarity=0.371 Sum_probs=100.8
Q ss_pred CcccCcCchhhhhhhhhhhhhhhccCCCchhHHHHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHHhHHHHHHHhhCCCc
Q psy2680 1 MSWRTKYPDNVIKGYKVNLQHALGTRIPNGLLNFFFKFNYVRKGTKKVKAQGIGVHKPEEIEEFGKNDLKVLADMLGDKA 80 (178)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~~~lP~~~~~~l~~~~~rr~~~~~l~~~Gig~~~~eei~~~~~~~L~~Le~~L~~~~ 80 (178)
.|+|..|...+.+.+ |++.+|+|++ .++++.+|+.+.+.|.+||+|+++.+++++.+.++|++||++||+++
T Consensus 6 ~w~d~~~~~~~~~~~-------~~~~~p~~l~-~~~~~~~r~~~~~~l~~~G~gr~~~ee~~~~~~~~l~aLs~~Lg~~~ 77 (126)
T cd03211 6 SWCDEETYDEVTKPR-------YGSPYPWPLN-HILPYQKQREARRKLKAIGWDDKTLDQVIEEVDQCCQALSQRLGTQP 77 (126)
T ss_pred hccCcchHHHHhHHH-------HccCCCHHHH-HHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
Confidence 366666555565544 4448999955 55566699999999999999999999999999999999999999999
Q ss_pred cccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHH
Q psy2680 81 FFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIK 131 (178)
Q Consensus 81 yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~ 131 (178)
||+||+||++||++|++++.+...++ .++++...+ ++||||++||+||.
T Consensus 78 ~l~Gd~pT~~Da~vf~~la~~~~~~~-~~~~l~~~~-~~~pnL~~y~~Ri~ 126 (126)
T cd03211 78 YFFGDQPTELDALVFGHLFTILTTQL-PNDELAEKV-KKYSNLLAFCRRIE 126 (126)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhcCC-CChHHHHHH-HhCcHHHHHHHhcC
Confidence 99999999999999999999986532 234665544 89999999999983
No 2
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.89 E-value=3.8e-23 Score=157.40 Aligned_cols=125 Identities=26% Similarity=0.377 Sum_probs=106.1
Q ss_pred CcccCcCchhhhhhhhhhhhhhhccCCCchhHHHHHHHHHHHHHhhh------hhhccCCCCCHHHHHHHHHhHHHHHHH
Q psy2680 1 MSWRTKYPDNVIKGYKVNLQHALGTRIPNGLLNFFFKFNYVRKGTKK------VKAQGIGVHKPEEIEEFGKNDLKVLAD 74 (178)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~~~lP~~~~~~l~~~~~rr~~~~~------l~~~Gig~~~~eei~~~~~~~L~~Le~ 74 (178)
+|+|..|..++.++++.+ .+||| ++.+++..+|+.+.++ +..+|+++++.++++..+.+++++||+
T Consensus 7 ~w~d~~n~~~~~~~~y~~-------~~p~p-l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~ 78 (137)
T cd03212 7 FWVDPKNYDTVTRPWYAS-------HIPFP-LNFYLPGKMQRRALDRLQLTRGFSPLDSETEVEAEIYRDAKECLNLLSQ 78 (137)
T ss_pred hHcCcchHHHHHHHHHcc-------CCCCc-HHHHhhHHHHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 488888888887766654 79999 5777787788888888 667788899999999999999999999
Q ss_pred hhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcC
Q psy2680 75 MLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCF 135 (178)
Q Consensus 75 ~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~ 135 (178)
.|++++||+||+||++||++|++++.+...+ ...+.++..+ .+||||++|++||.++||
T Consensus 79 ~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~-~~~~~l~~~~-~~~pnL~~~~~ri~~~~f 137 (137)
T cd03212 79 RLGESQFFFGDTPTSLDALVFGYLAPLLKAP-LPNNKLQNHL-KQCPNLCRFCDRILSLYF 137 (137)
T ss_pred HHCCCCcCCCCCCcHHHHHHHHHHHHHHhcc-CCChHHHHHH-HHCcHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988653 1235565555 799999999999999886
No 3
>KOG4244|consensus
Probab=99.83 E-value=1.7e-20 Score=154.74 Aligned_cols=108 Identities=32% Similarity=0.539 Sum_probs=94.5
Q ss_pred CCchhHHHHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhcc
Q psy2680 27 IPNGLLNFFFKFNYVRKGTKKVKAQGIGVHKPEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDK 106 (178)
Q Consensus 27 lP~~~~~~l~~~~~rr~~~~~l~~~Gig~~~~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~ 106 (178)
++..+++++....+.+.+.+++.++ ||+++.+|+.+.++++|++++..||+++|||||++|.+||++||+|+++++ |
T Consensus 171 l~~~l~~~~~~~~f~~kv~~r~~g~-IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P- 247 (281)
T KOG4244|consen 171 LFPLLLPLFWKAIFGKKVYKRSTGA-IGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-P- 247 (281)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcc-ccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-c-
Confidence 4434444443444667788899888 999999999999999999999999999999999999999999999999998 4
Q ss_pred CCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 107 DVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 107 ~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
..+++++++..++|||.+||+||++++||++
T Consensus 248 -~~~~i~d~le~d~p~l~eYceRIr~~~yP~d 278 (281)
T KOG4244|consen 248 -FRSHISDLLEGDFPNLLEYCERIRKEIYPND 278 (281)
T ss_pred -CCCcHHHHHhhhchHHHHHHHHHHHHhCCCc
Confidence 6678999998999999999999999999953
No 4
>KOG3028|consensus
Probab=99.83 E-value=4.9e-20 Score=155.06 Aligned_cols=127 Identities=25% Similarity=0.425 Sum_probs=111.1
Q ss_pred CcccCcCchhhhhhhhhhhhhhhccCCCchhHHHHHHHHHHHHHhhhhhhccCCCC--CHHHHHHHHHhHHHHHHHhhCC
Q psy2680 1 MSWRTKYPDNVIKGYKVNLQHALGTRIPNGLLNFFFKFNYVRKGTKKVKAQGIGVH--KPEEIEEFGKNDLKVLADMLGD 78 (178)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~~~lP~~~~~~l~~~~~rr~~~~~l~~~Gig~~--~~eei~~~~~~~L~~Le~~L~~ 78 (178)
||+++.|..+++++|+.. .+||| +|+++|..+++.+..++.-. +|.. ..++++..+++++++||++||+
T Consensus 111 ~~v~~~Ny~e~Tkk~yak-------~l~fP-~n~~~p~~l~~qAk~rl~l~-~g~~~~~e~~i~~~Aska~~~LS~~Lgs 181 (313)
T KOG3028|consen 111 FWVDTENYNEVTKKWYAK-------ALPFP-LNYILPGKLQRQAKERLQLT-LGELTEREDQIYKDASKALNLLSTLLGS 181 (313)
T ss_pred HHhcccchhhHhHHHHHh-------cCCCc-hhhcchhhhHHHHHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHHHhcC
Confidence 699999999999988886 89999 88999998999999887643 4555 4788999999999999999999
Q ss_pred CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 79 KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 79 ~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
+.|||||+||..||.+|+|++.+...+ .....++.++ ..++||++|++|++..||+.-
T Consensus 182 ~kffFgd~psslDa~lfs~la~~~~~~-Lp~~~Lq~~l-~~~~NL~~~~~~i~s~~f~~~ 239 (313)
T KOG3028|consen 182 KKFFFGDKPSSLDALLFSYLAILLQVA-LPNDSLQVHL-LAHKNLVRYVERIRSLYFRAS 239 (313)
T ss_pred ceEeeCCCCchHHHHHHHHHHHHHhcc-CCchhHHHHH-HhcchHHHHHHHHHHHHhccc
Confidence 999999999999999999999977775 3456677777 559999999999999999953
No 5
>KOG3027|consensus
Probab=99.81 E-value=1.6e-19 Score=144.53 Aligned_cols=114 Identities=25% Similarity=0.390 Sum_probs=102.3
Q ss_pred hhhccCCCchhHHHHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHH
Q psy2680 21 HALGTRIPNGLLNFFFKFNYVRKGTKKVKAQGIGVHKPEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQ 100 (178)
Q Consensus 21 ~~~~~~lP~~~~~~l~~~~~rr~~~~~l~~~Gig~~~~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~ 100 (178)
.-+|+..||| ++.+.+...||++.+.|...+++..+.+++.+.+..|+++|+..||.++||+|++||-+|+.+|||+..
T Consensus 139 ~R~gs~ypWP-Ls~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlyt 217 (257)
T KOG3027|consen 139 LRYGSVYPWP-LSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYT 217 (257)
T ss_pred hccCCCCCCc-HHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHH
Confidence 4578899999 788889889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCC
Q psy2680 101 IYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPD 137 (178)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~ 137 (178)
++.+.. .+..+.+.+ +.|+||.+||.||.+.||..
T Consensus 218 ilTt~L-pn~ela~~l-kkys~LlefcrrIeq~yF~~ 252 (257)
T KOG3027|consen 218 ILTTRL-PNMELANIL-KKYSNLLEFCRRIEQQYFKQ 252 (257)
T ss_pred hhhhcC-CcHHHHHHH-HHhHHHHHHHHHHHHHHHHh
Confidence 998852 334455544 89999999999999998864
No 6
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.33 E-value=6e-12 Score=83.73 Aligned_cols=66 Identities=26% Similarity=0.386 Sum_probs=54.2
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHH
Q psy2680 58 PEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINR 129 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR 129 (178)
.+++.+.+.+.|+.||.+|++++||+|++||++||++++++..+.... ...++ ...+|+|.+|++|
T Consensus 4 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~--~~~~~----~~~~p~l~~w~~r 69 (69)
T PF13410_consen 4 VERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVG--PDFDL----LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCT--HTCCH----HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhC--cCcCc----cccCHHHHHHHhC
Confidence 356788899999999999999999999999999999999999887763 11222 3799999999987
No 7
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.25 E-value=4.3e-11 Score=87.93 Aligned_cols=112 Identities=17% Similarity=0.133 Sum_probs=77.0
Q ss_pred hhhhhhhhhhhhhhccCCCchhHHHHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHHhHHHHHHHhhCCCccccCCCcch
Q psy2680 10 NVIKGYKVNLQHALGTRIPNGLLNFFFKFNYVRKGTKKVKAQGIGVHKPEEIEEFGKNDLKVLADMLGDKAFFFGEEPTT 89 (178)
Q Consensus 10 ~~~~~~~v~~~~~~~~~lP~~~~~~l~~~~~rr~~~~~l~~~Gig~~~~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~ 89 (178)
+...++.|++-..|..+ .+.+. +......... .....+.....+.+.|+.||+.|++++|++|+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~----~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tl 70 (115)
T cd03196 3 DPAALKEMLALIAENDN-------EFKHH-LDRYKYADRY----PEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSL 70 (115)
T ss_pred chHHHHHHHHHHHHcch-------hhHHH-HHhccchhhc----CcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccH
Confidence 45567777777776643 23233 2221111111 112466678889999999999999999999999999
Q ss_pred hhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhhh
Q psy2680 90 LDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDDI 141 (178)
Q Consensus 90 aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~~ 141 (178)
|||++++.+..+.... . ... ....+|+|.+|++||.++ |+++..
T Consensus 71 ADi~l~~~l~~~~~~~--~-~~~---~~~~~P~L~~w~~r~~~r--pa~~~~ 114 (115)
T cd03196 71 ADWAIFPFVRQFAHVD--P-KWF---DQSPYPRLRRWLNGFLAS--PLFSKI 114 (115)
T ss_pred HHHHHHHHHHHHHHhh--h-ccc---CcccCHHHHHHHHHHHcC--hHHHhh
Confidence 9999998876544321 0 011 127899999999999999 988764
No 8
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.23 E-value=4.9e-11 Score=83.05 Aligned_cols=69 Identities=43% Similarity=0.687 Sum_probs=55.2
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCc-hhhHHHhhcCHHHHHHHHHHH
Q psy2680 60 EIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEF-PLRDYLETTHSNLVAHINRIK 131 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~-~l~~~l~~~~PnL~~y~eR~~ 131 (178)
+....+.+.++.||+.|++++|++|++||+|||++++++..+.... ... ..... ...+|+|.+|++||.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~--~~~~~~~~~-~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAP--LPNSALQLI-LKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcC--CCChHHHHH-HHhCcHHHHHHHHhC
Confidence 5677899999999999999999999999999999999998765431 111 12122 368999999999984
No 9
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.20 E-value=3e-11 Score=85.97 Aligned_cols=67 Identities=25% Similarity=0.406 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHhHHHHHHHhhCCCc--cccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHh
Q psy2680 56 HKPEEIEEFGKNDLKVLADMLGDKA--FFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKN 132 (178)
Q Consensus 56 ~~~eei~~~~~~~L~~Le~~L~~~~--yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~ 132 (178)
...+.....+.+.+..|+..|+++. ||+|++||+|||++|++|..+.+. .+ .+.+|||.+|++||++
T Consensus 31 ~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~------~~----~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 31 ASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA------DF----PKDYPNLVRWYERIEE 99 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC------HH----TTTCHHHHHHHHHHHT
T ss_pred hhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc------cc----ccccHHHHHHHHhhcC
Confidence 4556677888999999999998888 999999999999999999766533 11 1489999999999974
No 10
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.17 E-value=1e-10 Score=81.76 Aligned_cols=69 Identities=20% Similarity=0.196 Sum_probs=57.3
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 58 PEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
.++....+.+.|+.++..|.+++|++|+++|+||+++++.+..+....+ ... .+.+|+|.+|.+||.++
T Consensus 26 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~---~~~----~~~~P~l~~w~~~~~~~ 94 (95)
T PF00043_consen 26 VEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGP---DFL----FEKFPKLKKWYERMFAR 94 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTT---TTT----HTTSHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCC---Ccc----cccCHHHHHHHHHHHcC
Confidence 3345667889999999999999999999999999999999998887732 121 27899999999999987
No 11
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=99.16 E-value=6.4e-11 Score=93.22 Aligned_cols=96 Identities=22% Similarity=0.384 Sum_probs=78.0
Q ss_pred CcccCcCchhhhhhhhhhhhhhhccCCCchhHHHHHHHHHHHHHhhhhhhccCCCCC-----------------------
Q psy2680 1 MSWRTKYPDNVIKGYKVNLQHALGTRIPNGLLNFFFKFNYVRKGTKKVKAQGIGVHK----------------------- 57 (178)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~~~lP~~~~~~l~~~~~rr~~~~~l~~~Gig~~~----------------------- 57 (178)
+|+++.|+.+++++|+.. .+||| +++++|.++|+.+..++...|++-..
T Consensus 18 lyv~~~Ny~~~Tr~~~~~-------~lpfP-~~y~~P~~~r~~a~~r~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (168)
T PF11801_consen 18 LYVDSKNYEEVTRPAFSK-------LLPFP-LNYNLPPRLRNQAKERLEHLGLSSLDTDEEEEEEEEDEEAEEAASQIPQ 89 (168)
T ss_pred HHhCchhHHHHhHHHHHh-------hCCCc-hhhcCCHHHHHHHHHHHHHhCCCcccchhhccccccccchhhhcccCCC
Confidence 489999999999977766 99999 88999999999999999887772100
Q ss_pred -------------HHHHHH---HHHhHHHHHHHhhCCC---ccccCCC-cchhhhhHHHHHHHHHhh
Q psy2680 58 -------------PEEIEE---FGKNDLKVLADMLGDK---AFFFGEE-PTTLDVVAFAHIAQIYCI 104 (178)
Q Consensus 58 -------------~eei~~---~~~~~L~~Le~~L~~~---~yl~Gd~-pT~aDa~vf~~L~~~~~~ 104 (178)
..+..+ ...+|+..|++.|++. .|++|+. ||++||.+||||+.+...
T Consensus 90 S~~~~~~~~~k~~~k~~lr~~~~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l~p 156 (168)
T PF11801_consen 90 SKLHKKQETAKSKQKEQLRLSKLAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLLVP 156 (168)
T ss_pred ccchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhcc
Confidence 001111 3678999999999999 9999987 999999999999987743
No 12
>PLN02473 glutathione S-transferase
Probab=99.15 E-value=2.8e-10 Score=91.07 Aligned_cols=77 Identities=23% Similarity=0.305 Sum_probs=62.1
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChh
Q psy2680 60 EIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWD 139 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~ 139 (178)
+....+.+.|+.||++|++++|++|+++|+||+++++.+..+... . ..... .+.+|+|.+|.+||.++ |+++
T Consensus 135 ~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~---~--~~~~~-~~~~P~l~~w~~~~~~~--p~~~ 206 (214)
T PLN02473 135 ELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNE---T--SLSGL-VTSRENLNRWWNEISAR--PAWK 206 (214)
T ss_pred HHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhc---c--ccHHH-HhcCHHHHHHHHHHhcC--hhhH
Confidence 345678889999999999999999999999999999888755432 1 11122 37899999999999999 9998
Q ss_pred hhhhc
Q psy2680 140 DICNN 144 (178)
Q Consensus 140 ~~~~~ 144 (178)
.++..
T Consensus 207 ~~~~~ 211 (214)
T PLN02473 207 KLMEL 211 (214)
T ss_pred HHHHH
Confidence 87654
No 13
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.14 E-value=1.6e-10 Score=83.63 Aligned_cols=72 Identities=19% Similarity=0.287 Sum_probs=58.4
Q ss_pred HHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhh
Q psy2680 61 IEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDD 140 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~ 140 (178)
....+.+.++.||.+|++++|++|+++|+|||++++++..+.... . . .. ...+|+|.+|+++|.++ |.+..
T Consensus 46 ~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~--~--~--~~-~~~~p~l~~~~~~~~~~--p~~~~ 116 (118)
T cd03187 46 NEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATP--F--A--KL-FDSRPHVKAWWEDISAR--PAWKK 116 (118)
T ss_pred HHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHcc--c--h--hh-hhcCchHHHHHHHHHhC--HHHHh
Confidence 455788999999999999999999999999999998887664321 1 1 11 26899999999999999 88765
Q ss_pred h
Q psy2680 141 I 141 (178)
Q Consensus 141 ~ 141 (178)
+
T Consensus 117 ~ 117 (118)
T cd03187 117 V 117 (118)
T ss_pred h
Confidence 3
No 14
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.13 E-value=1.9e-10 Score=82.14 Aligned_cols=68 Identities=15% Similarity=0.229 Sum_probs=56.0
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 60 EIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
...+.+.++|+.||+.|++++||+|+++|+||+++++++...... .. ....+|+|.+|++||.++ |++
T Consensus 43 ~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~------~~---~~~~~p~l~~~~~~~~~~--p~~ 110 (110)
T cd03180 43 ASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFEL------PI---ERPPLPHLERWYARLRAR--PAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHc------cc---ccccCchHHHHHHHHHhC--CCC
Confidence 456789999999999999999999999999999999888654322 11 126899999999999998 653
No 15
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.11 E-value=4.3e-10 Score=82.79 Aligned_cols=77 Identities=19% Similarity=0.317 Sum_probs=63.3
Q ss_pred HHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhh
Q psy2680 61 IEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDD 140 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~ 140 (178)
....+.+.+..||.+|++++||+|+++|+||+++++.+..+.... . . . ...||+|.+|++||.++ |.+..
T Consensus 36 ~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~--~--~---~-~~~~P~l~~~~~rv~~~--p~vk~ 105 (121)
T cd03209 36 YLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFE--P--D---C-LDAFPNLKDFLERFEAL--PKISA 105 (121)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhC--c--c---c-cccChHHHHHHHHHHHC--HHHHH
Confidence 455678899999999999999999999999999998887665431 1 1 1 26899999999999999 99988
Q ss_pred hhhcCCC
Q psy2680 141 ICNNLDL 147 (178)
Q Consensus 141 ~~~~~~~ 147 (178)
.....+.
T Consensus 106 ~~~~~~~ 112 (121)
T cd03209 106 YMKSDRF 112 (121)
T ss_pred HHhcccC
Confidence 7766643
No 16
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.11 E-value=3.1e-10 Score=82.91 Aligned_cols=76 Identities=21% Similarity=0.366 Sum_probs=62.3
Q ss_pred CHHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCC
Q psy2680 57 KPEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFP 136 (178)
Q Consensus 57 ~~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p 136 (178)
..+.....+.+.|+.|++.|++++||+|+++|+||+++++++..+... .+.+ + ..+|+|.+|++||.++ |
T Consensus 35 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~---~~~~----~-~~~p~l~~w~~~~~~~--p 104 (118)
T cd03177 35 PPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEAL---LPLD----L-SKYPNVRAWLERLKAL--P 104 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHh---cCCC----h-hhCchHHHHHHHHHcc--c
Confidence 345577789999999999999999999999999999999999876541 1112 1 5799999999999999 9
Q ss_pred Chhhhh
Q psy2680 137 DWDDIC 142 (178)
Q Consensus 137 ~~~~~~ 142 (178)
.++...
T Consensus 105 ~~~~~~ 110 (118)
T cd03177 105 PYEEAN 110 (118)
T ss_pred chHHHH
Confidence 887643
No 17
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.11 E-value=3e-10 Score=81.56 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=57.9
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChh
Q psy2680 60 EIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWD 139 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~ 139 (178)
.....+.+.++.||++|++++||+|+++|+|||++++.+..+... +.. ...+|+|.+|++||.++ |.++
T Consensus 43 ~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~----~~~-----~~~~p~l~~w~~~~~~~--p~~k 111 (114)
T cd03188 43 AARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGV----GLD-----LSDWPNLAAYLARVAAR--PAVQ 111 (114)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhc----CCC-----hhhChHHHHHHHHHHhC--HHhH
Confidence 355678999999999999999999999999999999888754322 111 25799999999999998 8876
Q ss_pred hh
Q psy2680 140 DI 141 (178)
Q Consensus 140 ~~ 141 (178)
.+
T Consensus 112 ~~ 113 (114)
T cd03188 112 AA 113 (114)
T ss_pred hh
Confidence 53
No 18
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.10 E-value=1.7e-10 Score=87.76 Aligned_cols=81 Identities=21% Similarity=0.312 Sum_probs=63.2
Q ss_pred HHHHHHHHHhHHHHHHHhhCC----------------CccccCCCcchhhhhHHHHHHHHHhhc-cCCCchhhHHHhhcC
Q psy2680 58 PEEIEEFGKNDLKVLADMLGD----------------KAFFFGEEPTTLDVVAFAHIAQIYCID-KDVEFPLRDYLETTH 120 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~----------------~~yl~Gd~pT~aDa~vf~~L~~~~~~~-~~~~~~l~~~l~~~~ 120 (178)
.+.....+.+.|..|+.+|++ ++|++|+++|+|||++++.+..+..+. ...+..+ ...+
T Consensus 27 ~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i----~~~~ 102 (134)
T cd03198 27 NENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEI----PADL 102 (134)
T ss_pred hHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc----cccC
Confidence 455667899999999999987 789999999999999999987553210 0011111 2689
Q ss_pred HHHHHHHHHHHhhcCCChhhhhhc
Q psy2680 121 SNLVAHINRIKNRCFPDWDDICNN 144 (178)
Q Consensus 121 PnL~~y~eR~~~r~~p~~~~~~~~ 144 (178)
|+|.+|++||.+| |+|+.+|..
T Consensus 103 P~L~aw~~ri~aR--Psfk~t~~~ 124 (134)
T cd03198 103 TGLWRYLKNAYQR--EEFTNTCPA 124 (134)
T ss_pred HHHHHHHHHHHCC--HHHHHHcCC
Confidence 9999999999999 999887754
No 19
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.08 E-value=6.5e-10 Score=82.64 Aligned_cols=81 Identities=12% Similarity=0.155 Sum_probs=61.8
Q ss_pred HHHHHHHHHhHHHHHHHhhCC-CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCC
Q psy2680 58 PEEIEEFGKNDLKVLADMLGD-KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFP 136 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~-~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p 136 (178)
.++..+.+.+.|..||..|++ ++||+||++|+|||++++++..+....... ..+ . +...+|+|.+|++||.+| |
T Consensus 28 ~~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~-~~~-~-~~~~~P~l~~w~~rl~~r--p 102 (121)
T cd03201 28 NDGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHY-KNW-S-VPESLTSVKSYMKALFSR--E 102 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHh-cCC-C-CcccchHHHHHHHHHHCC--c
Confidence 466778899999999999985 799999999999999999876654331000 001 0 126899999999999999 9
Q ss_pred Chhhhhh
Q psy2680 137 DWDDICN 143 (178)
Q Consensus 137 ~~~~~~~ 143 (178)
+++.++.
T Consensus 103 s~~~t~~ 109 (121)
T cd03201 103 SFVKTKA 109 (121)
T ss_pred hhhhcCC
Confidence 8877543
No 20
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.08 E-value=4.9e-10 Score=80.31 Aligned_cols=72 Identities=18% Similarity=0.273 Sum_probs=57.8
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 59 EEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
+.....+.+.|..||..|++++|++|+++|+|||++++++..+... +..+ ...+|+|.+|+++|.++ |++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~----~~~~----~~~~p~l~~w~~~~~~r--pa~ 103 (107)
T cd03186 34 EKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPAL----GIEL----PKQAKPLKDYMERVFAR--DSF 103 (107)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHc----CCCC----cccchHHHHHHHHHHCC--HHH
Confidence 3466678899999999999999999999999999999887543322 1122 14799999999999999 887
Q ss_pred hh
Q psy2680 139 DD 140 (178)
Q Consensus 139 ~~ 140 (178)
+.
T Consensus 104 ~~ 105 (107)
T cd03186 104 QK 105 (107)
T ss_pred HH
Confidence 65
No 21
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.07 E-value=5.5e-10 Score=81.59 Aligned_cols=79 Identities=18% Similarity=0.223 Sum_probs=63.0
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 59 EEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
+.....+.+.|+.|++.|++++||+|+++|+||+++++++..+.... . .. . ....+|+|.+|.+||.++ |.+
T Consensus 39 ~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~--~--~~-~-~~~~~p~l~~w~~~~~~~--p~~ 110 (123)
T cd03181 39 EAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYV--F--DK-E-WRAKYPNVTRWFNTVVNQ--PIF 110 (123)
T ss_pred HHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHH--c--CH-H-HHHhChHHHHHHHHHHcC--HHH
Confidence 34666788999999999999999999999999999999988764331 1 11 1 126799999999999999 988
Q ss_pred hhhhhcC
Q psy2680 139 DDICNNL 145 (178)
Q Consensus 139 ~~~~~~~ 145 (178)
..+....
T Consensus 111 ~~~~~~~ 117 (123)
T cd03181 111 KAVFGEV 117 (123)
T ss_pred HHHcCCC
Confidence 7765543
No 22
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.07 E-value=4.5e-10 Score=79.93 Aligned_cols=74 Identities=20% Similarity=0.183 Sum_probs=60.9
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCC
Q psy2680 58 PEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPD 137 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~ 137 (178)
.+.....+.++++.||.+|++++|++|+++|+|||+++..+...... .. ...+|+|.+|++||.++ |.
T Consensus 28 ~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~------~~----~~~~p~l~~w~~~~~~~--p~ 95 (103)
T cd03207 28 RMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF------GL----LPERPAFDAYIARITDR--PA 95 (103)
T ss_pred hhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc------CC----CCCChHHHHHHHHHHcC--HH
Confidence 34456779999999999999999999999999999999888765432 11 25799999999999999 98
Q ss_pred hhhhhh
Q psy2680 138 WDDICN 143 (178)
Q Consensus 138 ~~~~~~ 143 (178)
++.+.+
T Consensus 96 ~~~~~~ 101 (103)
T cd03207 96 FQRAAA 101 (103)
T ss_pred HHHHhc
Confidence 877554
No 23
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.06 E-value=5.8e-10 Score=83.00 Aligned_cols=69 Identities=19% Similarity=0.232 Sum_probs=57.5
Q ss_pred CHHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHh
Q psy2680 57 KPEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKN 132 (178)
Q Consensus 57 ~~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~ 132 (178)
..++..+.+.+.|+.|++.|++++|++|++||+||+++++++..+... .+.++ ...+|+|.+|++||.+
T Consensus 55 ~~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~----~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 55 GREAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV---SPFPL----LEEDDPVYDWFERCLD 123 (124)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc---Ccccc----cccCChHHHHHHHHhc
Confidence 355678889999999999999999999999999999999999876543 11121 2689999999999975
No 24
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.05 E-value=7.9e-10 Score=78.58 Aligned_cols=70 Identities=19% Similarity=0.265 Sum_probs=56.7
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCC
Q psy2680 58 PEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPD 137 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~ 137 (178)
.+.....+.+.++.||++|++++|++|+++|+||+++++++...... .+. ...+|+|.+|++||.++ |.
T Consensus 31 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~------~~~---~~~~p~l~~~~~~~~~~--p~ 99 (100)
T cd03206 31 KETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEG------GVD---LEDYPAIRRWLARIEAL--PG 99 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhcc------CCC---hhhCcHHHHHHHHHHhC--cC
Confidence 44567789999999999999999999999999999999988642211 111 26899999999999998 75
Q ss_pred h
Q psy2680 138 W 138 (178)
Q Consensus 138 ~ 138 (178)
+
T Consensus 100 ~ 100 (100)
T cd03206 100 F 100 (100)
T ss_pred C
Confidence 3
No 25
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.05 E-value=6.9e-10 Score=84.37 Aligned_cols=81 Identities=19% Similarity=0.322 Sum_probs=60.9
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhc-cCCCchhhHHHhhcCHHHHHHHHHHHhhcCCC
Q psy2680 59 EEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCID-KDVEFPLRDYLETTHSNLVAHINRIKNRCFPD 137 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~-~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~ 137 (178)
++....+.+.|+.||+.|++++||+|+++|+||+++++++..+.... ....... ..+ ..||+|.+|++||.++ |+
T Consensus 36 ~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~-~~~-~~~P~L~~w~~r~~~~--P~ 111 (142)
T cd03190 36 DEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNL-KRI-RDYPNLWNYLRRLYQN--PG 111 (142)
T ss_pred HHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhccccc-chh-hhCchHHHHHHHHhcC--ch
Confidence 34566889999999999999999999999999999999987653220 0000000 112 6899999999999999 98
Q ss_pred hhhhhh
Q psy2680 138 WDDICN 143 (178)
Q Consensus 138 ~~~~~~ 143 (178)
+..++.
T Consensus 112 ~k~~~~ 117 (142)
T cd03190 112 VAETTN 117 (142)
T ss_pred HhhhcC
Confidence 776443
No 26
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.04 E-value=7.6e-10 Score=80.51 Aligned_cols=64 Identities=25% Similarity=0.324 Sum_probs=53.4
Q ss_pred HHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 61 IEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
....+.+.|+.||.+|++++||+|+++|+|||++++.+..+... .. . ...+|+|.+|++||.++
T Consensus 55 ~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~------~~--~-~~~~p~l~~w~~~~~~~ 118 (119)
T cd03189 55 INPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALAR------GP--L-LEKYPNIAAYLERIEAR 118 (119)
T ss_pred HhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHc------Cc--c-cccCchHHHHHHHHhcC
Confidence 44578999999999999999999999999999998888765432 11 1 26899999999999987
No 27
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.04 E-value=7.4e-10 Score=81.24 Aligned_cols=81 Identities=22% Similarity=0.221 Sum_probs=61.5
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 59 EEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
+.....+.+.++.||..|++++|++|+++|.|||++++++..+.......+.... ....+|+|.+|+++|.++ |.+
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~w~~~~~~~--p~~ 109 (126)
T cd03185 34 EKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLL--DEEKTPLLAAWAERFLEL--EAV 109 (126)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCcccc--CcccCchHHHHHHHHHhc--cHH
Confidence 4467788999999999999999999999999999999988765432100111110 026799999999999999 988
Q ss_pred hhhhh
Q psy2680 139 DDICN 143 (178)
Q Consensus 139 ~~~~~ 143 (178)
..+..
T Consensus 110 ~~~~~ 114 (126)
T cd03185 110 KEVLP 114 (126)
T ss_pred HHhCC
Confidence 77543
No 28
>KOG0867|consensus
Probab=99.03 E-value=5.5e-10 Score=91.44 Aligned_cols=125 Identities=13% Similarity=0.157 Sum_probs=93.6
Q ss_pred cCchhhhhhhhhhhhhhhccCCCchhHHHHHHHHHHHHHhhh-hhhccCCCCCHHHHHHHHHhHHHHHHHhhCCCccccC
Q psy2680 6 KYPDNVIKGYKVNLQHALGTRIPNGLLNFFFKFNYVRKGTKK-VKAQGIGVHKPEEIEEFGKNDLKVLADMLGDKAFFFG 84 (178)
Q Consensus 6 ~~~~~~~~~~~v~~~~~~~~~lP~~~~~~l~~~~~rr~~~~~-l~~~Gig~~~~eei~~~~~~~L~~Le~~L~~~~yl~G 84 (178)
+||++...++.|++.+.+..+. +.+....+.+... +.+++.......+....+++.++.+|.+|.++.|++|
T Consensus 85 l~p~~~~~ra~v~~~l~~~~~~-------l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g 157 (226)
T KOG0867|consen 85 LLPKDLKERAIVDQWLEFENGV-------LDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAG 157 (226)
T ss_pred cCCcCHHHHHHHHHHHHhhhcc-------cccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccC
Confidence 8999999999999999877552 2222101333444 4444445555677888999999999999999999999
Q ss_pred CCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhhhhhcC
Q psy2680 85 EEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDDICNNL 145 (178)
Q Consensus 85 d~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~~~~~~ 145 (178)
+++|+||+.+.+.+..+... . . ......++|++.+|+++|.++ |.|++.+...
T Consensus 158 ~~~tlADl~~~~~~~~~~~~---~--~-~~~~~~~~p~v~~W~~~~~~~--P~~~e~~~~~ 210 (226)
T KOG0867|consen 158 DQLTLADLSLASTLSQFQGK---F--A-TEKDFEKYPKVARWYERIQKR--PAYEEANEKG 210 (226)
T ss_pred CcccHHHHHHhhHHHHHhHh---h--h-hhhhhhhChHHHHHHHHHHhC--ccHHHHHHHH
Confidence 99999999999999987422 1 0 011247999999999999999 9998865443
No 29
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.03 E-value=6.7e-10 Score=80.00 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=60.1
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 59 EEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
+.....+.+.|+.||+.|++++|++|+++|+|||++++++....... . . . ...+|+|.+|+++|.++ |.+
T Consensus 39 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~--~--~---~-~~~~p~l~~w~~~~~~~--p~~ 108 (113)
T cd03178 39 ERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIG--I--D---D-LDDFPNVKRWLDRIAAR--PAV 108 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhcc--c--c---c-hhhchHHHHHHHHHhhC--HHH
Confidence 34567789999999999999999999999999999998888765431 1 1 1 26799999999999998 988
Q ss_pred hhh
Q psy2680 139 DDI 141 (178)
Q Consensus 139 ~~~ 141 (178)
...
T Consensus 109 ~~~ 111 (113)
T cd03178 109 QRG 111 (113)
T ss_pred HHh
Confidence 764
No 30
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.03 E-value=2.1e-09 Score=79.80 Aligned_cols=78 Identities=18% Similarity=0.258 Sum_probs=62.3
Q ss_pred HHHHHHHhHHHHHHHhhCC---CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCC
Q psy2680 60 EIEEFGKNDLKVLADMLGD---KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFP 136 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~---~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p 136 (178)
.....+.+.|..||..|++ ++||+|+++|+||++++..+..+.... . .. ...||+|.+|++||.++ |
T Consensus 35 ~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~-----~--~~-~~~~P~l~~~~~rv~~~--p 104 (126)
T cd03210 35 DYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLA-----P--GC-LDAFPLLKAFVERLSAR--P 104 (126)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhC-----h--Hh-hhcChHHHHHHHHHHhC--c
Confidence 4555688999999999974 589999999999999998887654321 1 11 37899999999999999 9
Q ss_pred ChhhhhhcCCC
Q psy2680 137 DWDDICNNLDL 147 (178)
Q Consensus 137 ~~~~~~~~~~~ 147 (178)
.+...+...+-
T Consensus 105 ~v~~~~~~~~~ 115 (126)
T cd03210 105 KLKAYLESDAF 115 (126)
T ss_pred HHHHHHhCcCC
Confidence 99987766643
No 31
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.01 E-value=1.3e-09 Score=80.39 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=56.0
Q ss_pred HHHHHHHhHHHHHHHhhCCC----------ccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHH
Q psy2680 60 EIEEFGKNDLKVLADMLGDK----------AFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINR 129 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~----------~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR 129 (178)
.....+.+.|+.||.+|+++ +||+|+++|+|||++++.+..+.... . +........||+|.+|++|
T Consensus 29 ~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~--~--~~~~~~~~~~P~l~~w~~r 104 (111)
T cd03204 29 KILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLG--L--SRRYWGNGKRPNLEAYFER 104 (111)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcC--c--cccccccccChHHHHHHHH
Confidence 45667889999999999765 49999999999999999988765432 1 1100002579999999999
Q ss_pred HHhhcCCCh
Q psy2680 130 IKNRCFPDW 138 (178)
Q Consensus 130 ~~~r~~p~~ 138 (178)
|.+| |++
T Consensus 105 v~aR--psf 111 (111)
T cd03204 105 VLQR--ESF 111 (111)
T ss_pred HHcC--CCC
Confidence 9998 753
No 32
>PLN02395 glutathione S-transferase
Probab=99.01 E-value=1.4e-09 Score=86.91 Aligned_cols=77 Identities=16% Similarity=0.221 Sum_probs=60.8
Q ss_pred HHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhh
Q psy2680 61 IEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDD 140 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~ 140 (178)
..+.+.+.++.||++|++++|++|+++|+||+++++++..+... .+.. .. ...+|+|.+|++||.++ |.+..
T Consensus 135 ~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~---~~~~--~~-~~~~p~L~~w~~~~~~r--p~~k~ 206 (215)
T PLN02395 135 SEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGP---IGKA--YL-IKDRKHVSAWWDDISSR--PAWKE 206 (215)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcc---cchh--hh-hccCchHHHHHHHHHcC--hHHHH
Confidence 45567889999999999999999999999999998887654321 1111 11 26899999999999999 99988
Q ss_pred hhhcC
Q psy2680 141 ICNNL 145 (178)
Q Consensus 141 ~~~~~ 145 (178)
++...
T Consensus 207 ~~~~~ 211 (215)
T PLN02395 207 VLAKY 211 (215)
T ss_pred HHHHh
Confidence 77654
No 33
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.00 E-value=1.6e-09 Score=79.82 Aligned_cols=73 Identities=27% Similarity=0.383 Sum_probs=57.3
Q ss_pred HHHHHHhHHHHHHHh-hCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHh--hcCCC
Q psy2680 61 IEEFGKNDLKVLADM-LGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKN--RCFPD 137 (178)
Q Consensus 61 i~~~~~~~L~~Le~~-L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~--r~~p~ 137 (178)
..+.+.++++.||.+ +++++|++|+++|+||+++++.+....... .+. ...+|+|.+|++||.+ + |+
T Consensus 46 ~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~----~~~----~~~~p~l~~w~~~~~~~~~--p~ 115 (126)
T cd03183 46 AEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAG----YDV----FEGRPKLAAWRKRVKEAGN--PL 115 (126)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcC----Ccc----cccCchHHHHHHHHHHhcc--hh
Confidence 445688999999987 566799999999999999888876554331 111 2689999999999999 7 99
Q ss_pred hhhhhh
Q psy2680 138 WDDICN 143 (178)
Q Consensus 138 ~~~~~~ 143 (178)
++....
T Consensus 116 ~~~~~~ 121 (126)
T cd03183 116 FDEAHK 121 (126)
T ss_pred HHHHHH
Confidence 887543
No 34
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=98.99 E-value=1.1e-09 Score=81.00 Aligned_cols=82 Identities=16% Similarity=0.276 Sum_probs=63.2
Q ss_pred CHHHHHHHHHhHHHHHHHhhCC--CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhc
Q psy2680 57 KPEEIEEFGKNDLKVLADMLGD--KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRC 134 (178)
Q Consensus 57 ~~eei~~~~~~~L~~Le~~L~~--~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~ 134 (178)
..++....+.+.|+.||..|++ ++||+|+++|+||+++++++..+.......+.+. ....+|+|.+|++||.++
T Consensus 29 ~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~---~~~~~p~l~~w~~r~~~~- 104 (124)
T cd03184 29 DREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEF---PLDRFPKLKKWMDAMKED- 104 (124)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccC---CcccChHHHHHHHHhccC-
Confidence 4456778899999999999985 8999999999999999999876554421000011 137899999999999999
Q ss_pred CCChhhhhh
Q psy2680 135 FPDWDDICN 143 (178)
Q Consensus 135 ~p~~~~~~~ 143 (178)
|.+..+..
T Consensus 105 -p~v~~~~~ 112 (124)
T cd03184 105 -PAVQAFYT 112 (124)
T ss_pred -hHHHHHhC
Confidence 88877544
No 35
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=98.99 E-value=1.5e-09 Score=82.20 Aligned_cols=74 Identities=19% Similarity=0.244 Sum_probs=60.6
Q ss_pred HHHhHHHHHHHhhC--CCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhhh
Q psy2680 64 FGKNDLKVLADMLG--DKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDDI 141 (178)
Q Consensus 64 ~~~~~L~~Le~~L~--~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~~ 141 (178)
.+.+.|+.||+.|+ +++|++|+++|+||++++..+..+.... + .. ...||+|.+|++||.++ |.+...
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~-----~--~~-l~~~P~l~~~~~rv~~~--P~vk~~ 112 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELD-----P--SL-LSDFPLLQAFKTRISNL--PTIKKF 112 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhc-----h--hh-hccChHHHHHHHHHHcC--HHHHHH
Confidence 45789999999998 7789999999999999999988654331 1 11 27899999999999999 999888
Q ss_pred hhcCCC
Q psy2680 142 CNNLDL 147 (178)
Q Consensus 142 ~~~~~~ 147 (178)
......
T Consensus 113 ~~~~~~ 118 (137)
T cd03208 113 LQPGSP 118 (137)
T ss_pred HhcCCC
Confidence 777544
No 36
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=98.98 E-value=1.8e-09 Score=86.82 Aligned_cols=75 Identities=15% Similarity=0.159 Sum_probs=60.7
Q ss_pred HHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhhh
Q psy2680 62 EEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDDI 141 (178)
Q Consensus 62 ~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~~ 141 (178)
...+.+.|..||.+|++++||+|+++|+|||++++++..+.... . . ...||+|.+|++||.++ |++...
T Consensus 134 ~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~--~--~-----~~~~P~l~~w~~r~~~r--p~~~~~ 202 (215)
T PRK13972 134 QVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQR--I--D-----LAMYPAVKNWHERIRSR--PATGQA 202 (215)
T ss_pred HHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcC--C--c-----chhCHHHHHHHHHHHhC--HHHHHH
Confidence 34677899999999999999999999999999988876543221 1 1 26899999999999999 999887
Q ss_pred hhcCCC
Q psy2680 142 CNNLDL 147 (178)
Q Consensus 142 ~~~~~~ 147 (178)
......
T Consensus 203 ~~~~~~ 208 (215)
T PRK13972 203 LLKAQL 208 (215)
T ss_pred HHHhcc
Confidence 666544
No 37
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=98.98 E-value=2.7e-09 Score=77.26 Aligned_cols=67 Identities=19% Similarity=0.264 Sum_probs=55.2
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 59 EEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
+.....+.++|+.||+.|++++|++|+++|++|+++++.+..+.... ..+ ...+|+|.+|++||.++
T Consensus 48 ~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~~----~~~----~~~~p~l~~w~~~~~~~ 114 (117)
T cd03182 48 ERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVVK----LRV----PEELTHLRAWYDRMAAR 114 (117)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhcC----CCC----ccccHHHHHHHHHHHhc
Confidence 34567889999999999999999999999999999999887554331 122 25799999999999998
No 38
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=98.94 E-value=3.6e-09 Score=78.14 Aligned_cols=72 Identities=17% Similarity=0.310 Sum_probs=53.1
Q ss_pred HHhHHHHHHHhhC---CCccccCCCcchhhhhHHHHHHHHHhhcc-CCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhh
Q psy2680 65 GKNDLKVLADMLG---DKAFFFGEEPTTLDVVAFAHIAQIYCIDK-DVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDD 140 (178)
Q Consensus 65 ~~~~L~~Le~~L~---~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~-~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~ 140 (178)
+.+.++.||+.|+ +++|++| ++|+|||++++++..+..... ..+..+ ..++|+|.+|++||.++ |++.+
T Consensus 35 ~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~----~~~~P~l~~W~~~~~~r--p~~~~ 107 (120)
T cd03203 35 AAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDI----TEGRPNLAAWIEEMNKI--EAYTQ 107 (120)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccc----cccCcHHHHHHHHHhcc--hHHHh
Confidence 4667888888886 5899999 999999999999875432100 011111 25899999999999999 98877
Q ss_pred hhh
Q psy2680 141 ICN 143 (178)
Q Consensus 141 ~~~ 143 (178)
+..
T Consensus 108 ~~~ 110 (120)
T cd03203 108 TKQ 110 (120)
T ss_pred HcC
Confidence 543
No 39
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.94 E-value=3e-09 Score=73.79 Aligned_cols=67 Identities=21% Similarity=0.261 Sum_probs=54.7
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHH
Q psy2680 58 PEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRI 130 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~ 130 (178)
.+.....+.+.++.|+++|++++||+|+++|+||+++++++..+.... . .. . +...+|+|.+|+++|
T Consensus 34 ~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~--~--~~-~-~~~~~p~l~~~~~~~ 100 (100)
T cd00299 34 LEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLG--P--LL-G-LLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhh--h--hh-h-hhccCccHHHHHHhC
Confidence 345677899999999999999999999999999999999999876552 1 11 1 236899999999985
No 40
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=98.94 E-value=3.6e-09 Score=77.37 Aligned_cols=70 Identities=14% Similarity=0.239 Sum_probs=56.7
Q ss_pred HHHHHhHHHHHHHhhC--CCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChh
Q psy2680 62 EEFGKNDLKVLADMLG--DKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWD 139 (178)
Q Consensus 62 ~~~~~~~L~~Le~~L~--~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~ 139 (178)
...+.+.|..||++|+ .++||+|+++|+|||++++++...... +.+ ...+|+|.+|++||.++ |.+.
T Consensus 46 ~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~-----~~~~p~l~~w~~~~~~~--p~~~ 114 (121)
T cd03191 46 RHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRF----GVD-----LSPYPTIARINEACLEL--PAFQ 114 (121)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHh----CCC-----cccCcHHHHHHHHHHhC--hhHH
Confidence 3457889999999997 457999999999999999988754433 112 26899999999999999 9988
Q ss_pred hhh
Q psy2680 140 DIC 142 (178)
Q Consensus 140 ~~~ 142 (178)
.+.
T Consensus 115 ~~~ 117 (121)
T cd03191 115 AAH 117 (121)
T ss_pred HhC
Confidence 754
No 41
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=98.91 E-value=3.8e-09 Score=84.80 Aligned_cols=76 Identities=16% Similarity=0.273 Sum_probs=60.7
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 59 EEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
++....+.+.+..|+++|++++||+|+++|+||+++++++..+.... . ++. ...+|+|.+|++||.++ |.+
T Consensus 126 ~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~--~--~~~---~~~~p~l~~w~~~~~~r--p~~ 196 (211)
T PRK09481 126 DAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLG--I--ELS---GPGAKELKGYMTRVFER--DSF 196 (211)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcC--C--CCC---CCCChhHHHHHHHHhcc--HHH
Confidence 34556788899999999999999999999999999999987654331 1 221 14799999999999999 988
Q ss_pred hhhhh
Q psy2680 139 DDICN 143 (178)
Q Consensus 139 ~~~~~ 143 (178)
+..+.
T Consensus 197 ~~~~~ 201 (211)
T PRK09481 197 LASLT 201 (211)
T ss_pred HHHcC
Confidence 77543
No 42
>PRK10542 glutathionine S-transferase; Provisional
Probab=98.89 E-value=4.5e-09 Score=83.09 Aligned_cols=73 Identities=15% Similarity=0.285 Sum_probs=60.2
Q ss_pred HHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhh
Q psy2680 61 IEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDD 140 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~ 140 (178)
....+.+.|+.||+.|++++||+|+++|+||+++++++...... +.. ...+|+|.+|++||.++ |.++.
T Consensus 125 ~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~----~~~-----~~~~p~l~~w~~~~~~~--p~~k~ 193 (201)
T PRK10542 125 VRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAV----KLN-----LEGLEHIAAYMQRVAER--PAVAA 193 (201)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhcc----CCC-----cccchHHHHHHHHHHcC--HHHHH
Confidence 35678899999999999999999999999999999887755332 111 26799999999999999 99888
Q ss_pred hhhc
Q psy2680 141 ICNN 144 (178)
Q Consensus 141 ~~~~ 144 (178)
.+..
T Consensus 194 ~~~~ 197 (201)
T PRK10542 194 ALKA 197 (201)
T ss_pred HHHH
Confidence 7654
No 43
>PTZ00057 glutathione s-transferase; Provisional
Probab=98.89 E-value=5.1e-09 Score=83.83 Aligned_cols=77 Identities=22% Similarity=0.235 Sum_probs=61.2
Q ss_pred HHHHHHhHHHHHHHhhCCC--ccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 61 IEEFGKNDLKVLADMLGDK--AFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~~--~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
....+.+.|..||+.|+++ +||+|+++|+||+++++.+..+... . +. .+ ..||+|.+|++||.++ |.+
T Consensus 124 ~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~---~--~~--~l-~~~P~l~~~~~r~~~~--P~~ 193 (205)
T PTZ00057 124 LNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK---Y--PN--SL-KNFPLLKAHNEFISNL--PNI 193 (205)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh---C--hh--hh-ccChhHHHHHHHHHhC--hHH
Confidence 3456788999999999754 7999999999999999987765422 1 11 12 7899999999999999 999
Q ss_pred hhhhhcCCC
Q psy2680 139 DDICNNLDL 147 (178)
Q Consensus 139 ~~~~~~~~~ 147 (178)
++-+.+.+.
T Consensus 194 k~y~~~~~~ 202 (205)
T PTZ00057 194 KNYISNRKE 202 (205)
T ss_pred HHHHHhCCC
Confidence 987766543
No 44
>PRK10387 glutaredoxin 2; Provisional
Probab=98.87 E-value=4.1e-09 Score=83.86 Aligned_cols=63 Identities=11% Similarity=0.130 Sum_probs=53.7
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 60 EIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
+..+.+.+.|+.|+.+|++ +||+|+++|+||+++++++..+.... .+ ..+|+|.+|++||.++
T Consensus 142 ~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~-----~~-----~~~p~l~~w~~r~~~r 204 (210)
T PRK10387 142 GLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVK-----GI-----EWPPRVADYRDNMSKK 204 (210)
T ss_pred HHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeec-----CC-----CCCHHHHHHHHHHHHH
Confidence 5778899999999999987 99999999999999999998665431 11 3469999999999998
No 45
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=98.85 E-value=1e-08 Score=81.50 Aligned_cols=73 Identities=15% Similarity=0.193 Sum_probs=59.9
Q ss_pred HHHHHhHHHHHHHhhCC--CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChh
Q psy2680 62 EEFGKNDLKVLADMLGD--KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWD 139 (178)
Q Consensus 62 ~~~~~~~L~~Le~~L~~--~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~ 139 (178)
.+.+.+.|+.||++|++ .+||+|+++|+||+++++.+..+... ... ...||+|.+|++||.++ |.++
T Consensus 131 ~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~----~~~-----~~~~p~l~~~~~~~~~r--p~~~ 199 (210)
T TIGR01262 131 QHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERF----GVD-----LTPYPTLRRIAAALAAL--PAFQ 199 (210)
T ss_pred HHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHc----CCC-----cccchHHHHHHHHHhcC--HHHH
Confidence 34588999999999986 45999999999999999998765432 112 26899999999999999 9998
Q ss_pred hhhhcC
Q psy2680 140 DICNNL 145 (178)
Q Consensus 140 ~~~~~~ 145 (178)
.++...
T Consensus 200 ~~~~~~ 205 (210)
T TIGR01262 200 RAHPEN 205 (210)
T ss_pred HhCccc
Confidence 877755
No 46
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=98.82 E-value=9.9e-09 Score=73.30 Aligned_cols=57 Identities=21% Similarity=0.346 Sum_probs=46.6
Q ss_pred HHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHh
Q psy2680 64 FGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKN 132 (178)
Q Consensus 64 ~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~ 132 (178)
...+.++.|+.+|++++|++|+++|+|||++++.+.. .. . . ...+|||.+|++||.+
T Consensus 39 ~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~---~~--~--~-----~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 39 EKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQ---TG--L--A-----SAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHH---cc--c--c-----cccChHHHHHHHHHHh
Confidence 3447888999999999999999999999999987752 21 1 1 1579999999999986
No 47
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.81 E-value=9.2e-09 Score=72.83 Aligned_cols=63 Identities=25% Similarity=0.279 Sum_probs=51.3
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHH
Q psy2680 60 EIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIK 131 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~ 131 (178)
.....+.+.++.||..|++++|++|+++|+||+++++++..+... .. + + ..+|+|.+|++||.
T Consensus 43 ~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~------~~-~-~-~~~p~l~~~~~~~~ 105 (105)
T cd03179 43 FLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEG------GF-D-L-ADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhcccc------CC-C-h-HhCccHHHHHHhhC
Confidence 456678889999999999999999999999999999888765432 11 1 2 67999999999973
No 48
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.79 E-value=1.3e-08 Score=72.37 Aligned_cols=63 Identities=24% Similarity=0.315 Sum_probs=50.8
Q ss_pred HHHHHHhHHHHHHHhhCC--CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHH
Q psy2680 61 IEEFGKNDLKVLADMLGD--KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRI 130 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~--~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~ 130 (178)
....+.+.++.|+.+|++ ++||+|+++|+||+++++++..+.... ... . ...+|+|.+|++||
T Consensus 40 ~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~----~~~--~-~~~~p~l~~~~~~~ 104 (104)
T cd03192 40 LKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLD----PKL--L-LKKYPKLKALRERV 104 (104)
T ss_pred HHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhC----chh--h-HHhChhHHHHHHhC
Confidence 455678999999999987 899999999999999999998765441 111 1 26899999999985
No 49
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.76 E-value=3e-08 Score=72.54 Aligned_cols=71 Identities=18% Similarity=0.147 Sum_probs=56.5
Q ss_pred HHHHHHHHHhHHHHHHHhhC-CCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCC
Q psy2680 58 PEEIEEFGKNDLKVLADMLG-DKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFP 136 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~-~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p 136 (178)
.+.+.+.+.+.+..||.+|+ +++||+| .+|+||++++..+..+.... .+ + . |+|.+|++||.+| |
T Consensus 40 ~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~g----~~----l--~-p~l~ay~~r~~~r--P 105 (114)
T cd03195 40 SEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLNG----DP----V--P-ERLRDYARRQWQR--P 105 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHcC----CC----C--C-HHHHHHHHHHHCC--H
Confidence 34577788999999999995 5589999 59999999988887554331 12 1 2 9999999999999 9
Q ss_pred Chhhhh
Q psy2680 137 DWDDIC 142 (178)
Q Consensus 137 ~~~~~~ 142 (178)
+++.+.
T Consensus 106 a~~~~~ 111 (114)
T cd03195 106 SVQAWL 111 (114)
T ss_pred HHHHHH
Confidence 988765
No 50
>PLN02378 glutathione S-transferase DHAR1
Probab=98.74 E-value=1.8e-08 Score=81.29 Aligned_cols=79 Identities=11% Similarity=0.167 Sum_probs=58.8
Q ss_pred HHHHHHHHhHHHHHHHhhC--CCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCC
Q psy2680 59 EEIEEFGKNDLKVLADMLG--DKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFP 136 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~--~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p 136 (178)
+.....+.+.|+.||+.|+ +++||+||++|+||+++++++..+........ .. . +...||+|.+|++||.++ |
T Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~-~~-~-~~~~~p~l~~w~~~~~~r--p 191 (213)
T PLN02378 117 DGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFK-SW-S-VPESFPHVHNYMKTLFSL--D 191 (213)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhc-CC-C-chhHhHHHHHHHHHHhcC--C
Confidence 3445677889999999997 57899999999999999999876533210000 01 1 126899999999999999 9
Q ss_pred Chhhhh
Q psy2680 137 DWDDIC 142 (178)
Q Consensus 137 ~~~~~~ 142 (178)
.++.++
T Consensus 192 a~~~~~ 197 (213)
T PLN02378 192 SFEKTK 197 (213)
T ss_pred Ceeccc
Confidence 887643
No 51
>PRK11752 putative S-transferase; Provisional
Probab=98.74 E-value=2.7e-08 Score=83.08 Aligned_cols=80 Identities=16% Similarity=0.157 Sum_probs=60.0
Q ss_pred HHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCc-hhhHHHhhcCHHHHHHHHHHHhhcCCChh
Q psy2680 61 IEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEF-PLRDYLETTHSNLVAHINRIKNRCFPDWD 139 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~-~l~~~l~~~~PnL~~y~eR~~~r~~p~~~ 139 (178)
....+.+.|+.||++|++++||+|+++|+|||++++++..+.... .... .... ...||+|.+|++||.++ |.+.
T Consensus 179 ~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~-~~~~~~~~~--~~~~P~L~~w~~rv~~r--Ps~k 253 (264)
T PRK11752 179 FTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGN-LYDAAEFLD--VGSYKHVQRWAKEIAER--PAVK 253 (264)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhcc-ccccccccC--cccCHHHHHHHHHHHhC--HHHH
Confidence 445678899999999999999999999999999998886553210 0000 1101 26899999999999999 9888
Q ss_pred hhhhcC
Q psy2680 140 DICNNL 145 (178)
Q Consensus 140 ~~~~~~ 145 (178)
......
T Consensus 254 ~~~~~~ 259 (264)
T PRK11752 254 RGRIVN 259 (264)
T ss_pred HHHhcc
Confidence 765543
No 52
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=98.70 E-value=4.4e-08 Score=81.00 Aligned_cols=80 Identities=19% Similarity=0.316 Sum_probs=61.9
Q ss_pred HHHHHHHHhHHHHHHHhhC------------------CCccccCCCcchhhhhHHHHHHHHHhhc-cCCCchhhHHHhhc
Q psy2680 59 EEIEEFGKNDLKVLADMLG------------------DKAFFFGEEPTTLDVVAFAHIAQIYCID-KDVEFPLRDYLETT 119 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~------------------~~~yl~Gd~pT~aDa~vf~~L~~~~~~~-~~~~~~l~~~l~~~ 119 (178)
+.+...+.+.|..|++.|+ +++||.|+++|+|||++++.+..+.... ...+..+ .+.
T Consensus 122 ~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i----~~~ 197 (236)
T TIGR00862 122 DNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDI----PAE 197 (236)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCc----ccc
Confidence 3455568899999999997 5899999999999999999998776420 0011122 278
Q ss_pred CHHHHHHHHHHHhhcCCChhhhhhc
Q psy2680 120 HSNLVAHINRIKNRCFPDWDDICNN 144 (178)
Q Consensus 120 ~PnL~~y~eR~~~r~~p~~~~~~~~ 144 (178)
+|+|.+|++||.++ |+++.+|..
T Consensus 198 ~p~l~~w~~~~~~~--~sf~~t~p~ 220 (236)
T TIGR00862 198 FTGVWRYLSNAYAR--EEFTNTCPD 220 (236)
T ss_pred CchHHHHHHHHhcc--chHHhhCCC
Confidence 99999999999999 888776543
No 53
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.68 E-value=7.5e-08 Score=70.56 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=52.8
Q ss_pred HHHHHHHHHhHHHHHHHhh---CCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhc
Q psy2680 58 PEEIEEFGKNDLKVLADML---GDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRC 134 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L---~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~ 134 (178)
.+.....+.+.++.++..| ++++||+|| +|+||+++++.+..+... .+ ...|+|.+|++||.++
T Consensus 39 ~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~------~~-----~~~P~l~~~~~rv~~r- 105 (114)
T cd03194 39 SEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTY------GL-----PLSPAAQAYVDALLAH- 105 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHc------CC-----CCCHHHHHHHHHHHCC-
Confidence 3445556666777777666 577899999 999999999888765322 11 1239999999999999
Q ss_pred CCChhhhh
Q psy2680 135 FPDWDDIC 142 (178)
Q Consensus 135 ~p~~~~~~ 142 (178)
|.++..+
T Consensus 106 -Psv~~~~ 112 (114)
T cd03194 106 -PAMQEWI 112 (114)
T ss_pred -HHHHHHH
Confidence 8887654
No 54
>PRK10357 putative glutathione S-transferase; Provisional
Probab=98.67 E-value=8.1e-08 Score=76.14 Aligned_cols=73 Identities=12% Similarity=0.073 Sum_probs=57.6
Q ss_pred HHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhh
Q psy2680 61 IEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDD 140 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~ 140 (178)
....+.+.|+.||++|++++ |+|+++|+||+++++++..+.... ..... ...+|+|.+|++||.++ |+|+.
T Consensus 126 ~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~--~~~~~----~~~~p~l~~~~~~i~~r--p~~~~ 196 (202)
T PRK10357 126 QREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRR--VAPGW----CVDRPHLVKLVENLFQR--ESFAR 196 (202)
T ss_pred HHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcc--cCcch----hhcChHHHHHHHHHhcC--hhhhh
Confidence 45578899999999998888 999999999999999887553321 11111 25799999999999999 99877
Q ss_pred hh
Q psy2680 141 IC 142 (178)
Q Consensus 141 ~~ 142 (178)
++
T Consensus 197 ~~ 198 (202)
T PRK10357 197 TE 198 (202)
T ss_pred cC
Confidence 54
No 55
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.66 E-value=7.3e-08 Score=74.46 Aligned_cols=59 Identities=14% Similarity=0.246 Sum_probs=45.7
Q ss_pred HHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 68 DLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 68 ~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
+=+.++..+++++|+.|++||+||+++|+.|..+.... .+++ + .++|||.+|++||++.
T Consensus 88 ~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~-----~~~D-l-~~~p~I~~W~eRm~~~ 146 (149)
T cd03197 88 LNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHP-----AFKD-M-VEETKIGEWYERMDAA 146 (149)
T ss_pred HHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhc-----cccc-h-hhCcCHHHHHHHHHHH
Confidence 33445555567789999999999999999998877552 2223 2 5899999999999874
No 56
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.65 E-value=9.7e-08 Score=76.37 Aligned_cols=68 Identities=19% Similarity=0.247 Sum_probs=56.5
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 60 EIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
.....+.+.++.++..|++++|++|+++|+|||++++++..+.... ..+ ..+|+|.+|++||.++ |.+
T Consensus 131 ~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~----~~~-----~~~p~l~~w~~r~~~r--p~~ 198 (211)
T COG0625 131 AARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLG----EEL-----ADYPALKAWYERVLAR--PAF 198 (211)
T ss_pred HHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcC----ccc-----ccChHHHHHHHHHHcC--Cch
Confidence 3556788999999999999999999999999999999998744331 111 5799999999999988 774
No 57
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=98.65 E-value=4.6e-08 Score=82.08 Aligned_cols=77 Identities=10% Similarity=0.099 Sum_probs=58.8
Q ss_pred HHHHHHhHHHHHHHhhCC-CccccCCCcchhhhhHHHHHHHHHhhcc-CCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 61 IEEFGKNDLKVLADMLGD-KAFFFGEEPTTLDVVAFAHIAQIYCIDK-DVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~-~~yl~Gd~pT~aDa~vf~~L~~~~~~~~-~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
..+.+.+.|..||++|++ ++||+|+++|+|||++++++..+..... ..+.. +...+|+|.+|++||.++ |+|
T Consensus 172 ~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~----i~~~~P~L~~w~~ri~~r--ps~ 245 (265)
T PLN02817 172 TEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWS----VPDSLPFVKSYMKNIFSM--ESF 245 (265)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----ccccCHHHHHHHHHHhcc--hhH
Confidence 345677889999999974 6999999999999999999876644310 00001 126899999999999999 999
Q ss_pred hhhhh
Q psy2680 139 DDICN 143 (178)
Q Consensus 139 ~~~~~ 143 (178)
..++.
T Consensus 246 ~~~~~ 250 (265)
T PLN02817 246 VKTRA 250 (265)
T ss_pred hhcCC
Confidence 87544
No 58
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.62 E-value=3.6e-08 Score=79.37 Aligned_cols=63 Identities=13% Similarity=0.219 Sum_probs=51.1
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCH-HHHHHHHHHHhh
Q psy2680 59 EEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHS-NLVAHINRIKNR 133 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~P-nL~~y~eR~~~r 133 (178)
++....+++.|+.||.+|++++|+.| ++|+||+++++++..+... . . -.+| ||.+|++||+++
T Consensus 140 ~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~---~--~------~~~p~~l~~w~~Ri~ar 203 (209)
T TIGR02182 140 PGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLV---A--G------INWPSRVADYLDNMSKK 203 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeee---c--C------CCCChHHHHHHHHHHHH
Confidence 45778899999999999999999955 6999999999998743322 0 1 1356 999999999988
No 59
>PRK15113 glutathione S-transferase; Provisional
Probab=98.60 E-value=1.7e-07 Score=75.31 Aligned_cols=75 Identities=12% Similarity=-0.014 Sum_probs=59.5
Q ss_pred HHHHHHHHhHHHHHHHhhCC-CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCC
Q psy2680 59 EEIEEFGKNDLKVLADMLGD-KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPD 137 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~-~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~ 137 (178)
+...+.+.+.++.||.+|++ .+|++|+ +|+|||++++++..+... +.. + .|+|.+|++||.++ |.
T Consensus 136 ~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~----~~~----~---~p~l~~~~~r~~~r--p~ 201 (214)
T PRK15113 136 EAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLH----GDE----V---PERLADYATFQWQR--AS 201 (214)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHc----CCC----C---CHHHHHHHHHHhcC--HH
Confidence 45667789999999999975 4799996 999999999998755432 111 1 29999999999999 99
Q ss_pred hhhhhhcCCC
Q psy2680 138 WDDICNNLDL 147 (178)
Q Consensus 138 ~~~~~~~~~~ 147 (178)
++..+....+
T Consensus 202 ~~~~~~~~~~ 211 (214)
T PRK15113 202 VQRWLALSAK 211 (214)
T ss_pred HHHHHHHhhh
Confidence 9988876654
No 60
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.49 E-value=5e-07 Score=63.94 Aligned_cols=62 Identities=13% Similarity=0.132 Sum_probs=49.1
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHH
Q psy2680 60 EIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRI 130 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~ 130 (178)
.....+.++|+.||.+|++++| +++|+|||++++.+..+.... .+... ...+|+|.+|.+||
T Consensus 37 ~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~~----~~~~p~l~~w~~rm 98 (98)
T cd03205 37 RQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRH--PDLDW----RAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHc--cCcch----hhhChHHHHHHHhC
Confidence 3566788999999999999998 999999999999988765431 11111 26899999999986
No 61
>KOG0406|consensus
Probab=98.35 E-value=2.2e-06 Score=70.59 Aligned_cols=83 Identities=24% Similarity=0.314 Sum_probs=61.2
Q ss_pred CCCCHHHHHHHHHhHHHHHHHhhC-CCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHh
Q psy2680 54 GVHKPEEIEEFGKNDLKVLADMLG-DKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKN 132 (178)
Q Consensus 54 g~~~~eei~~~~~~~L~~Le~~L~-~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~ 132 (178)
++...+.....+.++|..||+.|+ +++||+|++++.+|+++.+++..+.......+ ...-.....+|+|.+|++||.+
T Consensus 123 ~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~-~~~~~~~~~~P~L~~W~~~~~~ 201 (231)
T KOG0406|consen 123 GGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFG-GVKFIIEEETPKLIKWIKRMKE 201 (231)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhc-CcccCCCCCCccHHHHHHHHhc
Confidence 334556677889999999999999 89999999999999988866666555421111 0111113789999999999998
Q ss_pred hcCCChh
Q psy2680 133 RCFPDWD 139 (178)
Q Consensus 133 r~~p~~~ 139 (178)
+ +...
T Consensus 202 ~--~~V~ 206 (231)
T KOG0406|consen 202 D--EAVK 206 (231)
T ss_pred C--hhHH
Confidence 7 5443
No 62
>PLN02907 glutamate-tRNA ligase
Probab=98.34 E-value=9.5e-07 Score=83.36 Aligned_cols=66 Identities=18% Similarity=0.133 Sum_probs=52.3
Q ss_pred HHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCC
Q psy2680 64 FGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPD 137 (178)
Q Consensus 64 ~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~ 137 (178)
.+.+.|+.|+.+|++++||+|+++|+||+++++.+...... ..... . ...||||.+|+++|.++ |.
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~--~~~~~---~-~~~yPnL~RW~erI~ar--Ps 159 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQR--WESLR---K-SKKYQNLVRWFNSISAE--YS 159 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhh--hhccc---c-cccCHHHHHHHHHHHhC--CC
Confidence 35678999999999999999999999999999988654111 01011 1 26899999999999999 87
No 63
>KOG4420|consensus
Probab=98.03 E-value=1.2e-05 Score=67.19 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=58.0
Q ss_pred HHHHHHhHHHHHHHhhCC----CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHH-hhcCHHHHHHHHHHHhhcC
Q psy2680 61 IEEFGKNDLKVLADMLGD----KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYL-ETTHSNLVAHINRIKNRCF 135 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~----~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l-~~~~PnL~~y~eR~~~r~~ 135 (178)
+...+...|+.+|+.|.. ..||+|+.+|.||+++...|..+.... +... .. ..+.|||.+|.+|++.|
T Consensus 206 ild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg--~e~~---yw~~gsrpnle~Yf~rvrrR-- 278 (325)
T KOG4420|consen 206 ILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLG--LEKK---YWEDGSRPNLESYFERVRRR-- 278 (325)
T ss_pred HHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcc--cHHH---hcccCCCccHHHHHHHHHhh--
Confidence 445677888888988877 689999999999999999999888763 2211 12 13789999999999999
Q ss_pred CChhhh
Q psy2680 136 PDWDDI 141 (178)
Q Consensus 136 p~~~~~ 141 (178)
+++..+
T Consensus 279 ~sf~kv 284 (325)
T KOG4420|consen 279 FSFRKV 284 (325)
T ss_pred hHHHHh
Confidence 666553
No 64
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.03 E-value=2.5e-06 Score=71.74 Aligned_cols=83 Identities=16% Similarity=0.242 Sum_probs=60.9
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhc-cCCCchhhHHHhhcCHHHHHHHHHHHhhcCCCh
Q psy2680 60 EIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCID-KDVEFPLRDYLETTHSNLVAHINRIKNRCFPDW 138 (178)
Q Consensus 60 ei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~-~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~ 138 (178)
+....+-+.|+.||+.|++++|++||++|.||+-+|..|..+-..= ..+.-.++. + ++||||..|+..+-+. |.+
T Consensus 205 ea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~r-I-~dypnL~~yLr~LYq~--pg~ 280 (324)
T COG0435 205 EAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRR-I-RDYPNLWGYLRDLYQL--PGF 280 (324)
T ss_pred HHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccch-h-hcCchHHHHHHHHhcC--ccc
Confidence 3445677889999999999999999999999999999988543210 000111222 3 6799999999988875 888
Q ss_pred hhhhhcCC
Q psy2680 139 DDICNNLD 146 (178)
Q Consensus 139 ~~~~~~~~ 146 (178)
.++++.-.
T Consensus 281 ~~T~df~h 288 (324)
T COG0435 281 AETVDFDH 288 (324)
T ss_pred ccccchhH
Confidence 87666543
No 65
>KOG1695|consensus
Probab=97.76 E-value=0.0001 Score=59.97 Aligned_cols=74 Identities=18% Similarity=0.277 Sum_probs=56.9
Q ss_pred HHhHHHHHHHhhC--CCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhhhh
Q psy2680 65 GKNDLKVLADMLG--DKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDDIC 142 (178)
Q Consensus 65 ~~~~L~~Le~~L~--~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~~~ 142 (178)
...-+..++..|. ++.||+||++|.||+.++.++..+... ..... ...+|+|.+|.+||.+. |.....+
T Consensus 128 ~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~---~~~~~----~~~~P~L~a~~~kv~~~--p~ik~~i 198 (206)
T KOG1695|consen 128 KPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL---LDPSA----LDHFPKLKAFKERVSSI--PNIKKYL 198 (206)
T ss_pred hHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh---cCchh----hccChHHHHHHHHHhcC--chHHHHH
Confidence 3445667888887 557999999999999999999988873 11111 26789999999999999 8877766
Q ss_pred hcCCC
Q psy2680 143 NNLDL 147 (178)
Q Consensus 143 ~~~~~ 147 (178)
.+.+.
T Consensus 199 ~~r~~ 203 (206)
T KOG1695|consen 199 ESRPV 203 (206)
T ss_pred hcCCC
Confidence 65543
No 66
>KOG0868|consensus
Probab=97.58 E-value=0.00014 Score=57.88 Aligned_cols=77 Identities=13% Similarity=0.187 Sum_probs=60.5
Q ss_pred HHHHHHHHHhHHHHHHHhhCC--CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcC
Q psy2680 58 PEEIEEFGKNDLKVLADMLGD--KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCF 135 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~--~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~ 135 (178)
..-....+.+.+.+||+.|.. ..|.+||+.|+||+++.+.+...-.. ... | +.||-|.+.-+++.+.
T Consensus 130 ~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf----~vd----l-~PYPti~ri~e~l~el-- 198 (217)
T KOG0868|consen 130 DQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRF----HVD----L-TPYPTITRINEELAEL-- 198 (217)
T ss_pred hHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhc----ccc----C-CcCchHHHHHHHHHhC--
Confidence 344666789999999999954 57999999999999999999876332 223 2 7899999999999887
Q ss_pred CChhhhhhcC
Q psy2680 136 PDWDDICNNL 145 (178)
Q Consensus 136 p~~~~~~~~~ 145 (178)
|+++-.+..-
T Consensus 199 paFq~ahP~n 208 (217)
T KOG0868|consen 199 PAFQAAHPDN 208 (217)
T ss_pred HHHHhcCCCC
Confidence 8887754433
No 67
>KOG2903|consensus
Probab=97.47 E-value=6.1e-05 Score=63.02 Aligned_cols=83 Identities=16% Similarity=0.180 Sum_probs=58.0
Q ss_pred HHHHHHhHHHHHHHhhCCCc--cccCCCcchhhhhHHHHHHHHHhhc-cCCCchhhHHHhhcCHHHHHHHHHHHhhcCCC
Q psy2680 61 IEEFGKNDLKVLADMLGDKA--FFFGEEPTTLDVVAFAHIAQIYCID-KDVEFPLRDYLETTHSNLVAHINRIKNRCFPD 137 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~~~--yl~Gd~pT~aDa~vf~~L~~~~~~~-~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~ 137 (178)
....+-+.|+.+|..|+++. |++|+++|.||+.+|..+..+-..= +.+.-.. ..+..+||+|-.|+.++-..+ |+
T Consensus 204 ~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~-~~ir~~Yp~l~~~lk~iY~~~-~~ 281 (319)
T KOG2903|consen 204 EVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNK-KTIRDEYPNLHNWLKNIYWNI-PG 281 (319)
T ss_pred HHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecch-hhhhccCcHHHHHHHHHHhhc-cc
Confidence 34456778888999999988 9999999999999999876533220 0011111 223359999999999887643 77
Q ss_pred hhhhhhcC
Q psy2680 138 WDDICNNL 145 (178)
Q Consensus 138 ~~~~~~~~ 145 (178)
+..+++.-
T Consensus 282 ~~~Ttd~~ 289 (319)
T KOG2903|consen 282 FSSTTDFN 289 (319)
T ss_pred hhhccchh
Confidence 77665543
No 68
>KOG3029|consensus
Probab=96.89 E-value=0.0033 Score=53.44 Aligned_cols=50 Identities=16% Similarity=0.354 Sum_probs=42.5
Q ss_pred CCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 77 GDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 77 ~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
.+++|+-|++|++||.++||.|..+.... .+.+++ ....|..|.-||.+.
T Consensus 306 knr~flGG~kPnLaDLsvfGvl~sm~gc~-----afkd~~--q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 306 KNRPFLGGKKPNLADLSVFGVLRSMEGCQ-----AFKDCL--QNTSIGEWYYRMEAL 355 (370)
T ss_pred CCCCccCCCCCchhhhhhhhhhhHhhhhh-----HHHHHH--hcchHHHHHHHHHHH
Confidence 67899999999999999999999988773 345555 578999999999876
No 69
>KOG1422|consensus
Probab=96.65 E-value=0.0024 Score=51.92 Aligned_cols=74 Identities=15% Similarity=0.278 Sum_probs=54.1
Q ss_pred HHHHHHhHHHHHHHhhCC---CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHH-HhhcCHHHHHHHHHHHhhcCC
Q psy2680 61 IEEFGKNDLKVLADMLGD---KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDY-LETTHSNLVAHINRIKNRCFP 136 (178)
Q Consensus 61 i~~~~~~~L~~Le~~L~~---~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~-l~~~~PnL~~y~eR~~~r~~p 136 (178)
..+.+-+.|..|+.+|.. ++|+.||++|.|||.+.+=|..+-.+- ..+++. +-+..+++.+|+..+-++ .
T Consensus 124 ~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~----k~yk~~~IP~~lt~V~rYl~~~ya~--d 197 (221)
T KOG1422|consen 124 LEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAA----KHYKNFEIPASLTGVWRYLKNAYAR--D 197 (221)
T ss_pred HHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHH----HHhcCCCCchhhhHHHHHHHHHHhH--H
Confidence 455677788999999985 789999999999999999887665441 011110 115679999999998776 4
Q ss_pred Chhh
Q psy2680 137 DWDD 140 (178)
Q Consensus 137 ~~~~ 140 (178)
++..
T Consensus 198 ~F~~ 201 (221)
T KOG1422|consen 198 EFTN 201 (221)
T ss_pred Hhhc
Confidence 4444
No 70
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.64 E-value=0.011 Score=44.78 Aligned_cols=65 Identities=17% Similarity=0.226 Sum_probs=48.1
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 58 PEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
.++....+...|..|+.+|......-| ++|+-||.+|++|..+.... .+ .=-|++.+|+++|.++
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivk-----gi-----~~P~~V~~Y~~~~s~~ 121 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVK-----GI-----QWPPKVRAYMDRMSKA 121 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCT-----TS--------HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhcc-----CC-----cCCHHHHHHHHHHHHH
Confidence 456888999999999999985555555 99999999999999877552 11 3458999999999876
No 71
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=96.52 E-value=0.013 Score=43.35 Aligned_cols=72 Identities=18% Similarity=0.181 Sum_probs=50.5
Q ss_pred HHHHHHHHHhHHHHHHHhhCC-CccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCC
Q psy2680 58 PEEIEEFGKNDLKVLADMLGD-KAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFP 136 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~-~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p 136 (178)
.++....+.+.+...+.+|++ .+||||+ .|+||+.+..+|..+... +.+ --+.|.+|.+++-++ |
T Consensus 41 s~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~~----gd~-------vP~~l~~Ya~~qwqr--p 106 (117)
T PF14834_consen 41 SEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVTY----GDP-------VPERLADYAERQWQR--P 106 (117)
T ss_dssp -HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHTT----T-----------HHHHHHHHHHHT---H
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHHc----CCC-------CCHHHHHHHHHHHCC--H
Confidence 344677778888888888876 5899996 599999998888877644 112 246788999999988 8
Q ss_pred Chhhhhh
Q psy2680 137 DWDDICN 143 (178)
Q Consensus 137 ~~~~~~~ 143 (178)
+.++.+.
T Consensus 107 sVQ~Wla 113 (117)
T PF14834_consen 107 SVQRWLA 113 (117)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777654
No 72
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=95.90 E-value=0.049 Score=41.13 Aligned_cols=64 Identities=11% Similarity=0.083 Sum_probs=51.2
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 59 EEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 59 eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
.+.+..+..+|..|+.+|.... ..+..+|.-||.+|++|..+.... . +.=-|+|.+|+++|.++
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~-~~n~~ls~DDi~lFp~LR~Lt~vk-----g-----i~~P~~V~~Y~~~~s~~ 122 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSE-AVNGQLSTDDIILFPILRNLTLVK-----G-----LVFPPKVKAYLERMSAL 122 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCcc-ccCCcCCHHHHHHHHHHhhhhhhc-----C-----CCCCHHHHHHHHHHHHH
Confidence 3678889999999999995444 456789999999999999887652 1 13458899999999876
No 73
>KOG1147|consensus
Probab=93.07 E-value=0.035 Score=51.04 Aligned_cols=70 Identities=13% Similarity=0.159 Sum_probs=48.4
Q ss_pred HHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhhhhhc
Q psy2680 65 GKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDDICNN 144 (178)
Q Consensus 65 ~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~~~~~ 144 (178)
+...+..|+..|.-..||+|.++|+||.++++.|..-... ...... ...+-++.+|.+ +|.+++.+.+
T Consensus 93 ~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~-----~~~lk~-~k~~~~v~Rw~~------~~~~~~a~~~ 160 (712)
T KOG1147|consen 93 ISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMR-----QEQLKA-KKDYQNVERWYD------LPEFQEAHNK 160 (712)
T ss_pred HHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccch-----HHHHHh-hCCchhhhhhcC------cHhHHHHHHH
Confidence 5566777777888889999999999999999999864222 111111 146788888887 3555555544
Q ss_pred CC
Q psy2680 145 LD 146 (178)
Q Consensus 145 ~~ 146 (178)
+.
T Consensus 161 v~ 162 (712)
T KOG1147|consen 161 VL 162 (712)
T ss_pred HH
Confidence 43
No 74
>KOG1668|consensus
Probab=80.80 E-value=1.7 Score=35.88 Aligned_cols=55 Identities=24% Similarity=0.311 Sum_probs=41.9
Q ss_pred HhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 66 KNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 66 ~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
...+..|+..|.++.|.-|.+++-.|+.+|+-+. .. +.. ..++|..+|+..+...
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~---~e------p~s----~~~v~~~~w~~~l~a~ 64 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALG---VE------PQS----ARLVNAERWYSKLEAL 64 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcc---cC------cch----hhhhHHHHHHHHHHHH
Confidence 4578889999999999999999999999998876 22 111 3556777777666553
No 75
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=74.09 E-value=9.7 Score=30.67 Aligned_cols=65 Identities=11% Similarity=0.170 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHhhcCHHHHHHHHHHHhh
Q psy2680 58 PEEIEEFGKNDLKVLADMLGDKAFFFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLETTHSNLVAHINRIKNR 133 (178)
Q Consensus 58 ~eei~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r 133 (178)
...+..++..||++|+..+-+.. -.....|.=||.+|+.|.++..++ .+ .=-..+..|+.+|.++
T Consensus 140 t~~~~~~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~v~-----gi-----~wps~v~dy~~~msek 204 (215)
T COG2999 140 TAQYLKRIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLTLVA-----GI-----QWPSRVADYRDNMSEK 204 (215)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhccceecc-----cC-----CCcHHHHHHHHHHHHh
Confidence 34578889999999999987655 444578999999999999876552 11 2224588999999876
No 76
>PF08628 Nexin_C: Sorting nexin C terminal; InterPro: IPR013937 This region is found at the C terminus of proteins belonging to the nexin family. It is found on proteins which also contain IPR001683 from INTERPRO.
Probab=64.62 E-value=17 Score=26.10 Aligned_cols=42 Identities=19% Similarity=0.377 Sum_probs=27.6
Q ss_pred cCHHHHHHHHHHHhhcCCChhhhhhcCCCCCCCCCCCCchhHHhHHHHhh
Q psy2680 119 THSNLVAHINRIKNRCFPDWDDICNNLDLNAHLPKPPPEEKEEKEKEEKK 168 (178)
Q Consensus 119 ~~PnL~~y~eR~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (178)
.-+++..|+..+++-+||+- .-...+.|++++.+.+|+++-+
T Consensus 36 se~~v~~~i~~l~~~lwP~g--------~~~~~~~~Rt~~ek~~tr~~A~ 77 (113)
T PF08628_consen 36 SEEQVARYIQLLRESLWPNG--------KLAEPPPPRTEEEKLRTRQEAR 77 (113)
T ss_pred CHHHHHHHHHHHHHhhCCCC--------CCCCCCCCCCHHHHHHHHHHHH
Confidence 44889999999999999972 1233334555555555555443
No 77
>TIGR03685 L21P_arch 50S ribosomal protein L12P. This model represents the L12P protein of the large (50S) subunit of the archaeal ribosome.
Probab=46.24 E-value=61 Score=23.50 Aligned_cols=20 Identities=5% Similarity=0.160 Sum_probs=9.1
Q ss_pred HHHHHHHHHhhcCCChhhhhhcC
Q psy2680 123 LVAHINRIKNRCFPDWDDICNNL 145 (178)
Q Consensus 123 L~~y~eR~~~r~~p~~~~~~~~~ 145 (178)
+..++..+... +.++++...
T Consensus 38 ~~~la~~L~gk---~i~eli~~~ 57 (105)
T TIGR03685 38 VKALVAALEGV---NIEEAIKKA 57 (105)
T ss_pred HHHHHHHHcCC---CHHHHHHhh
Confidence 33444555442 455555433
No 78
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=32.26 E-value=87 Score=20.51 Aligned_cols=39 Identities=28% Similarity=0.430 Sum_probs=24.0
Q ss_pred HHHhhhhhhccCCCCCHHHHHHHHHhHH----HHHHHhhCCCcc
Q psy2680 42 RKGTKKVKAQGIGVHKPEEIEEFGKNDL----KVLADMLGDKAF 81 (178)
Q Consensus 42 r~~~~~l~~~Gig~~~~eei~~~~~~~L----~~Le~~L~~~~y 81 (178)
|.+.+.+..- .|.|+.++|+..+.+|- .+.+.+|...+|
T Consensus 6 rk~VQ~iKEi-v~~hse~eIya~L~ecnMDpnea~qrLL~qD~F 48 (60)
T PF06972_consen 6 RKTVQSIKEI-VGCHSEEEIYAMLKECNMDPNEAVQRLLSQDPF 48 (60)
T ss_pred HHHHHHHHHH-hcCCCHHHHHHHHHHhCCCHHHHHHHHHhcCcH
Confidence 3445555432 36689999999988774 445555554443
No 79
>PF11329 DUF3131: Protein of unknown function (DUF3131); InterPro: IPR021478 This bacterial family of proteins has no known function.
Probab=30.59 E-value=3.9e+02 Score=23.75 Aligned_cols=89 Identities=12% Similarity=0.181 Sum_probs=55.0
Q ss_pred HHHhhhhhhccCCCCCHHHHHHHHHhHHHHHHHhhCCC-----ccccC---------CC------cchhhhhHHHHHHHH
Q psy2680 42 RKGTKKVKAQGIGVHKPEEIEEFGKNDLKVLADMLGDK-----AFFFG---------EE------PTTLDVVAFAHIAQI 101 (178)
Q Consensus 42 r~~~~~l~~~Gig~~~~eei~~~~~~~L~~Le~~L~~~-----~yl~G---------d~------pT~aDa~vf~~L~~~ 101 (178)
..+...+.+..+|-.+.+|..+++.+.|..|+.+=--+ .|.-. .+ .|.+|+ |-|...
T Consensus 38 ~yL~al~AA~~lglIs~~e~~~Rl~~~L~tL~~lpl~~g~lPn~~Y~t~T~~~~~~~~~p~~~~gwSavD~---GrLl~~ 114 (367)
T PF11329_consen 38 SYLMALVAARELGLISREEFDQRLEKTLATLEKLPLFRGHLPNKWYNTQTGQPVDYGNQPGERIGWSAVDI---GRLLIA 114 (367)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCcccCCcCccceeecCcCcccccCCCCCccCCccHhhH---HHHHHH
Confidence 33444455556777999999999999999998642111 12211 11 355666 444432
Q ss_pred HhhccCCCchhhHHHhhcCHHHHHHHHHHHhhcCCChhhhhhcCC
Q psy2680 102 YCIDKDVEFPLRDYLETTHSNLVAHINRIKNRCFPDWDDICNNLD 146 (178)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~~PnL~~y~eR~~~r~~p~~~~~~~~~~ 146 (178)
+.. +...+|.+.++++.+..++ ++..+++.+.
T Consensus 115 L~i-----------l~~~~P~~a~~v~~l~~~W--~~~~~i~~G~ 146 (367)
T PF11329_consen 115 LRI-----------LKQRYPEYAEQVDALVLRW--NFCRLIDDGE 146 (367)
T ss_pred HHH-----------HHHHCchHHHHHHHHHHhC--CHHHHhcCCe
Confidence 222 3468999999999999883 4555555443
No 80
>PRK07122 RNA polymerase sigma factor SigF; Reviewed
Probab=30.20 E-value=2.4e+02 Score=23.30 Aligned_cols=77 Identities=14% Similarity=0.198 Sum_probs=42.0
Q ss_pred chhhhhhhhhhhhhh---hccCCCchhHHHHHHHHHHHHHhhhhhhccCC-CCC--HHHHHHHHHhHHHHHHHhhCCCcc
Q psy2680 8 PDNVIKGYKVNLQHA---LGTRIPNGLLNFFFKFNYVRKGTKKVKAQGIG-VHK--PEEIEEFGKNDLKVLADMLGDKAF 81 (178)
Q Consensus 8 ~~~~~~~~~v~~~~~---~~~~lP~~~~~~l~~~~~rr~~~~~l~~~Gig-~~~--~eei~~~~~~~L~~Le~~L~~~~y 81 (178)
.+||++--.|.+-.. |+..-......|..++ ++..+...+..++.. +.+ ..+....+.+....|++.|
T Consensus 67 ~~DLiQeG~iGLi~AierFDp~~G~~FsTYA~~~-Irg~I~~~lr~~~~~ir~Pr~~~~~~~~i~~~~~~l~~~l----- 140 (264)
T PRK07122 67 RDDLVQVARVGLVNAVNRFDVETGSDFVSFAVPT-IMGEVRRHFRDNSWSVKVPRRLKELHLRLGRATAELSQRL----- 140 (264)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCChHHHHHHH-HHHHHHHHHHHcCCccccCHHHHHHHHHHHHHHHHHHHHh-----
Confidence 566777666654443 5443333334566565 888888888765432 122 2233444555555555554
Q ss_pred ccCCCcchhhh
Q psy2680 82 FFGEEPTTLDV 92 (178)
Q Consensus 82 l~Gd~pT~aDa 92 (178)
|..||..++
T Consensus 141 --g~~pt~~ei 149 (264)
T PRK07122 141 --GRAPTASEL 149 (264)
T ss_pred --CCCCCHHHH
Confidence 555665554
No 81
>KOG4107|consensus
Probab=27.55 E-value=2.5e+02 Score=20.59 Aligned_cols=77 Identities=19% Similarity=0.195 Sum_probs=45.6
Q ss_pred hccCCCCCHHHHHHHHHhHHHHHHHhhCCCccccCC-Ccchhhh-------hHHHHHHHHHhhccCCCchhhHHHhhcCH
Q psy2680 50 AQGIGVHKPEEIEEFGKNDLKVLADMLGDKAFFFGE-EPTTLDV-------VAFAHIAQIYCIDKDVEFPLRDYLETTHS 121 (178)
Q Consensus 50 ~~Gig~~~~eei~~~~~~~L~~Le~~L~~~~yl~Gd-~pT~aDa-------~vf~~L~~~~~~~~~~~~~l~~~l~~~~P 121 (178)
..|-|..+..-....+.....++|.+ |++-|=-|+ ++++.|| +..+-+....++.. ...+ +.+..+.-
T Consensus 34 YsGygdkdarvtaAiasniWAAyer~-gn~af~e~~Lkf~lldcenG~vaiT~VA~~LLc~yAk~--tvgl-GmlkaKa~ 109 (125)
T KOG4107|consen 34 YSGYGDKDARVTAAIASNIWAAYERR-GNQAFNEDDLKFTLLDCENGVVAITLVARMLLCVYAKK--TVGL-GMLKAKAH 109 (125)
T ss_pred ecccCcchhHHHHHHHHHHHHHHHHh-ccccccccCceeeeeeecCCeeeHHHHHHHHHHHhhhc--ccch-HHHHHHHH
Confidence 34666665554556778888999876 555566665 7788885 33333333333421 1233 33446677
Q ss_pred HHHHHHHHH
Q psy2680 122 NLVAHINRI 130 (178)
Q Consensus 122 nL~~y~eR~ 130 (178)
.|.+|.++=
T Consensus 110 tLa~YLE~P 118 (125)
T KOG4107|consen 110 TLAAYLEQP 118 (125)
T ss_pred HHHHHHHhH
Confidence 888888864
No 82
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]
Probab=22.73 E-value=4.6e+02 Score=21.95 Aligned_cols=75 Identities=16% Similarity=0.281 Sum_probs=44.6
Q ss_pred ccCCCcchhhhhHHHHHHHHHhhccCCCchhhHHHh--hcCHHHHHHHHHHHhhcCCChhhhhhcCCCCCCCCCCCCc
Q psy2680 82 FFGEEPTTLDVVAFAHIAQIYCIDKDVEFPLRDYLE--TTHSNLVAHINRIKNRCFPDWDDICNNLDLNAHLPKPPPE 157 (178)
Q Consensus 82 l~Gd~pT~aDa~vf~~L~~~~~~~~~~~~~l~~~l~--~~~PnL~~y~eR~~~r~~p~~~~~~~~~~~~~~~~~~~~~ 157 (178)
-.|..+|++||+..-+...+-..|-.+..+-++.++ +.+-...=|+.-...-|||. +++-.....+++.|-+...
T Consensus 32 H~G~SLS~~eILa~LYf~~m~~~p~~p~~~~RDrfiLSKGHaa~AlYa~Lae~G~~p~-eeL~~~~~~~srL~~Hp~~ 108 (243)
T COG3959 32 HVGGSLSVVEILAVLYFKIMNIDPDDPKWPGRDRFILSKGHAAPALYATLAEKGYFPE-EELETFRRIGSRLPGHPER 108 (243)
T ss_pred CcCccchHHHHHHHHHHHHhccCCCCCCCCCCCeEEEecccchHHHHHHHHHcCCCCH-HHHHHhccCCCcCCCCCcc
Confidence 578889999997666665443332111122222222 45556666777777889994 5555556667777766554
No 83
>COG2918 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism]
Probab=22.67 E-value=50 Score=30.26 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=17.7
Q ss_pred CcCchhhhhhhhhhhhhhhccC
Q psy2680 5 TKYPDNVIKGYKVNLQHALGTR 26 (178)
Q Consensus 5 ~~~~~~~~~~~~v~~~~~~~~~ 26 (178)
+.|.+-|..||.-.+|.+.|-+
T Consensus 129 ~~YRegL~~rYGk~mQ~ISGIH 150 (518)
T COG2918 129 TLYREGLKNRYGKLMQTISGIH 150 (518)
T ss_pred HHHHHHHHHHhhhHHhhhhcee
Confidence 4577889999999999986644
Done!