BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2684
(356 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P542|ABCF1_MOUSE ATP-binding cassette sub-family F member 1 OS=Mus musculus GN=Abcf1
PE=1 SV=1
Length = 837
Score = 335 bits (859), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/358 (53%), Positives = 249/358 (69%), Gaps = 45/358 (12%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ + T++FSGGWR+RVSLARALF+EPTLL+LDEPTNHLDLNAVIWL+NYLQ W+KTLL+
Sbjct: 436 MQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLI 495
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHDQ FL+++CTDIIHLD ++L YY+GN+ FKKMY QK+KEL K+YE QEK+++E+K+
Sbjct: 496 VSHDQGFLDDVCTDIIHLDTQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKA 555
Query: 121 QGMSKEKAERQHSHKALKEQ--ARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPP 178
G S ++AE+Q ++Q R++ Q ++ EP ELL++P+EY V+F FP+PP L PP
Sbjct: 556 GGKSTKQAEKQTKEVLTRKQQKCRRKNQDEESQEPPELLKRPKEYTVRFTFPDPPPLSPP 615
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
VLGLH VTFGY G K L + ++FG+DM+SR+ +VGPNG+GKST L LL G+LTP G
Sbjct: 616 VLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTNG--- 672
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEH 298
E+RK+ RL+IG F+Q E
Sbjct: 673 ----------------------------------------EMRKNHRLKIGFFNQQYAEQ 692
Query: 299 LFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
L ++TP EYL + FNLPY+ +R+ LG FGL S+AHTI I LSGGQKARV AEL
Sbjct: 693 LHMEETPTEYLQRSFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELAC 750
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV A EP +L+LDEPTN+LD+ ++ L + +K ++VVSHD +
Sbjct: 735 LSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINDYKGAVIVVSHDARLI 794
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKK 95
+ ++ + + G+F +K+
Sbjct: 795 TETNCQLWVVEEQGVSQIDGDFDDYKR 821
>sp|Q6MG08|ABCF1_RAT ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus
GN=Abcf1 PE=1 SV=1
Length = 839
Score = 335 bits (858), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/358 (53%), Positives = 249/358 (69%), Gaps = 45/358 (12%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ + T++FSGGWR+RVSLARALF+EPTLL+LDEPTNHLDLNAVIWL+NYLQ W+KTLL+
Sbjct: 438 MQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLI 497
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHDQ FL+++CTDIIHLD ++L YY+GN+ FKKMY QK+KEL K+YE QEK+++E+K+
Sbjct: 498 VSHDQGFLDDVCTDIIHLDTQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKA 557
Query: 121 QGMSKEKAERQHSHKALKEQ--ARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPP 178
G S ++AE+Q ++Q R++ Q ++ +P ELL++PREY V+F FP+PP L PP
Sbjct: 558 GGKSTKQAEKQTKEVLTRKQQKCRRKNQDEESQDPPELLKRPREYTVRFTFPDPPPLSPP 617
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
VLGLH VTFGY G K L + ++FG+DM+SR+ +VGPNG+GKST L LL G+LTP G
Sbjct: 618 VLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTNG--- 674
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEH 298
E+RK+ RL+IG F+Q E
Sbjct: 675 ----------------------------------------EMRKNHRLKIGFFNQQYAEQ 694
Query: 299 LFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
L ++TP EYL + FNLPY+ +R+ LG FGL S+AHTI I LSGGQKARV AEL
Sbjct: 695 LHMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELAC 752
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV A EP +L+LDEPTN+LD+ ++ L + +K ++VVSHD +
Sbjct: 737 LSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLI 796
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKK 95
+ ++ + + G+F +K+
Sbjct: 797 TETNCQLWVVEEQSVSQIDGDFDDYKR 823
>sp|Q767L0|ABCF1_PIG ATP-binding cassette sub-family F member 1 OS=Sus scrofa GN=ABCF1
PE=2 SV=1
Length = 807
Score = 333 bits (854), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/358 (53%), Positives = 249/358 (69%), Gaps = 45/358 (12%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ + T++FSGGWR+RVSLARALF+EPTLL+LDEPTNHLDLNAVIWL+NYLQ W+KTLL+
Sbjct: 406 MQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLI 465
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHDQ FL+++CTDIIHLD ++L YY+GN+ FKKMY QK+KEL K+YE QEK+++E+K+
Sbjct: 466 VSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKA 525
Query: 121 QGMSKEKAERQHSHKALKEQ--ARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPP 178
G S ++AE+Q ++Q R++ Q ++ E ELL++P+EY V+F FP+PP L PP
Sbjct: 526 GGKSTKQAEKQTKEALTRKQQKCRRKNQDEESQEAPELLKRPKEYTVRFTFPDPPPLSPP 585
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
VLGLH VTFGY G K L + ++FG+DM+SR+ +VGPNG+GKST L LL G+LTP +G
Sbjct: 586 VLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTRG--- 642
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEH 298
E+RK+ RL+IG F+Q E
Sbjct: 643 ----------------------------------------EMRKNHRLKIGFFNQQYAEQ 662
Query: 299 LFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
L ++TP EYL + FNLPY+ +R+ LG FGL S+AHTI I LSGGQKARV AEL
Sbjct: 663 LRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELAC 720
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV A EP +L+LDEPTN+LD+ ++ L + +K ++VVSHD +
Sbjct: 705 LSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLI 764
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKK 95
+ ++ + + G+F +K+
Sbjct: 765 TETNCQLWVVEEQSVSQIDGDFDDYKR 791
>sp|Q7YR37|ABCF1_PANTR ATP-binding cassette sub-family F member 1 OS=Pan troglodytes
GN=ABCF1 PE=3 SV=1
Length = 807
Score = 332 bits (852), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/358 (53%), Positives = 248/358 (69%), Gaps = 45/358 (12%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ + T++FSGGWR+RVSLARALF+EPTLL+LDEPTNHLDLNAVIWL+NYLQ W+KTLL+
Sbjct: 406 MQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLI 465
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHDQ FL+++CTDIIHLD ++L YY+GN+ FKKMY QK+KEL K+YE QEK+++E+K+
Sbjct: 466 VSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKA 525
Query: 121 QGMSKEKAERQHSHKALKEQ--ARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPP 178
G S ++AE+Q ++Q R++ Q ++ E ELL++P+EY V+F FP+PP L PP
Sbjct: 526 GGKSTKQAEKQTKEALTRKQQKCRRKNQDEESQEAPELLKRPKEYTVRFTFPDPPPLSPP 585
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
VLGLH VTFGY G K L + ++FG+DM+SR+ +VGPNG+GKST L LL G+LTP G
Sbjct: 586 VLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHG--- 642
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEH 298
E+RK+ RL+IG F+Q E
Sbjct: 643 ----------------------------------------EMRKNHRLKIGFFNQQYAEQ 662
Query: 299 LFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
L ++TP EYL + FNLPY+ +R+ LG FGL S+AHTI I LSGGQKARV AEL
Sbjct: 663 LRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELAC 720
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV A EP +L+LDEPTN+LD+ ++ L + +K ++VVSHD +
Sbjct: 705 LSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLI 764
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKK 95
+ ++ + + G+F +K+
Sbjct: 765 TETNCQLWVVEEQSVSQIDGDFEDYKR 791
>sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1
PE=1 SV=2
Length = 845
Score = 332 bits (852), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/358 (53%), Positives = 248/358 (69%), Gaps = 45/358 (12%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ + T++FSGGWR+RVSLARALF+EPTLL+LDEPTNHLDLNAVIWL+NYLQ W+KTLL+
Sbjct: 444 MQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLI 503
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHDQ FL+++CTDIIHLD ++L YY+GN+ FKKMY QK+KEL K+YE QEK+++E+K+
Sbjct: 504 VSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKA 563
Query: 121 QGMSKEKAERQHSHKALKEQ--ARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPP 178
G S ++AE+Q ++Q R++ Q ++ E ELL++P+EY V+F FP+PP L PP
Sbjct: 564 GGKSTKQAEKQTKEALTRKQQKCRRKNQDEESQEAPELLKRPKEYTVRFTFPDPPPLSPP 623
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
VLGLH VTFGY G K L + ++FG+DM+SR+ +VGPNG+GKST L LL G+LTP G
Sbjct: 624 VLGLHGVTFGYQGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHG--- 680
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEH 298
E+RK+ RL+IG F+Q E
Sbjct: 681 ----------------------------------------EMRKNHRLKIGFFNQQYAEQ 700
Query: 299 LFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
L ++TP EYL + FNLPY+ +R+ LG FGL S+AHTI I LSGGQKARV AEL
Sbjct: 701 LRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELAC 758
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV A EP +L+LDEPTN+LD+ ++ L + +K ++VVSHD +
Sbjct: 743 LSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLI 802
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKK 95
+ ++ + + G+F +K+
Sbjct: 803 TETNCQLWVVEEQSVSQIDGDFEDYKR 829
>sp|Q9M1H3|AB4F_ARATH ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4
PE=2 SV=1
Length = 723
Score = 291 bits (745), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 219/368 (59%), Gaps = 56/368 (15%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ ++T+ FSGGWR+R+SLARALF++PTLLLLDEPTNHLDL AV+WL+ YL WKKTL+V
Sbjct: 312 MQVRATQSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVV 371
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHD+ FLN +CT+IIHL + L +Y+GNF F+ Y Q+RKE+ K++++ +KQ++ K
Sbjct: 372 VSHDRDFLNTVCTEIIHLHDQNLHFYRGNFDGFESGYEQRRKEMNKKFDVYDKQMKAAKR 431
Query: 121 QGM--SKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKP---REYIVKFRFPNPPYL 175
G +EK + + A KE ++ + + DE E P R+Y V F FP P L
Sbjct: 432 TGNRGQQEKVKDRAKFTAAKEASKSKSKGKTVDEEGPAPEAPRKWRDYSVVFHFPEPTEL 491
Query: 176 PPPVLGLHDVTFGYPGG-KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNK 234
PP+L L +V+F YP L V+ G+DM +RVA+VGPNG GKST LNLL G+L P
Sbjct: 492 TPPLLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVP-- 549
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQH 294
+GE+R+S +LRIG++ QH
Sbjct: 550 -----------------------------------------TEGEMRRSQKLRIGRYSQH 568
Query: 295 SGEHLFPDDTPCEYLMKL------FNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKAR 348
+ L +TP +YL++L F+ E R +LG FGLPS+ H PI LSGGQKAR
Sbjct: 569 FVDLLTMGETPVQYLLRLHPDQEGFS-KQEAVRAKLGKFGLPSHNHLSPIAKLSGGQKAR 627
Query: 349 VALAELTL 356
V +++
Sbjct: 628 VVFTSISM 635
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV +P +LLLDEPTNHLD+ ++ L + L + +++VSHD +
Sbjct: 620 LSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLI 679
Query: 69 NNICTD-----IIHLDMKKLFYYKGNFTLFKK 95
+ +C + I ++ + ++ G F +K+
Sbjct: 680 SRVCAEEEKSQIWVVEDGTVNFFPGTFEEYKE 711
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 192 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTP---NKGKVLLEKVNFGLDM 248
GK LL+ + + R L+GPNG+GKST L LL P N +L+E+ G +
Sbjct: 174 GKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDEK 233
Query: 249 ESRVALVGPN 258
+ A+V N
Sbjct: 234 SALNAVVSAN 243
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 234 KGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 269
+GK LL+ + + R L+GPNG+GKST L LL
Sbjct: 173 RGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLL 208
>sp|Q8H0V6|AB3F_ARATH ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3
PE=2 SV=1
Length = 715
Score = 249 bits (636), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 195/363 (53%), Gaps = 63/363 (17%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ K+T FSGGWR+R++LARALF+EP LLLLDEPTNHLDL+AV+WL+ YL W KT +V
Sbjct: 332 MQLKATNTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLTKWPKTFIV 391
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSH + FLN + TDIIHL +KL YKGN+ +F++ ++ K K +E E+ M++
Sbjct: 392 VSHAREFLNTVVTDIIHLQNQKLSTYKGNYDIFERTREEQVKNQQKAFESSERSRSHMQA 451
Query: 121 -----QGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYL 175
+ +K + Q KAL A +D D KF FP P
Sbjct: 452 FIDKFRYNAKRASLVQSRIKALDRLAHVDQVINDPD-------------YKFEFPTPDDK 498
Query: 176 P-PPVLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNK 234
P PP++ D +FGYPGG +L +NFG+D++SR+A+VGPNGIGKST L L+ G+L P+
Sbjct: 499 PGPPIISFSDASFGYPGGPLLFRNLNFGIDLDSRIAMVGPNGIGKSTILKLISGDLQPSS 558
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQH 294
G V +S ++R+ F QH
Sbjct: 559 GTVF-------------------------------------------RSAKVRVAVFSQH 575
Query: 295 SGEHLFPDDTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAE 353
+ L P Y+M+ + +P +K R LG G+ P+ LSGGQK+RVA A+
Sbjct: 576 HVDGLDLSSNPLLYMMRCYPGVPEQKLRSHLGSLGVTGNLALQPMYTLSGGQKSRVAFAK 635
Query: 354 LTL 356
+T
Sbjct: 636 ITF 638
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV+ A+ F +P LLLLDEP+NHLDL+AV L L ++ + +VSHD+ +
Sbjct: 623 LSGGQKSRVAFAKITFKKPHLLLLDEPSNHLDLDAVEALIQGLVLFQGGICMVSHDEHLI 682
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKM 96
+ ++ + ++ + G F +KK+
Sbjct: 683 SGSVDELWVVSDGRIAPFHGTFHDYKKL 710
>sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1 OS=Arabidopsis thaliana GN=ABCF1
PE=1 SV=1
Length = 595
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 197/361 (54%), Gaps = 58/361 (16%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ K TK+FSGGWR+R++LARALF+ PT+LLLDEPTNHLDL A +WL+ L+ + + L+V
Sbjct: 205 MQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTNHLDLEACVWLEESLKNFDRILVV 264
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKEL----TKEYELQEKQIR 116
VSH Q FLN +CT+IIH+ K+L YY GNF Y Q R EL K+Y +++QI
Sbjct: 265 VSHSQDFLNGVCTNIIHMQSKQLKYYTGNF----DQYCQTRSELEENQMKQYRWEQEQIS 320
Query: 117 EMKSQGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEK-PREYIVKFRFPNPPYL 175
MK + A H L QA+ + + E L EK R+ ++ FRF + L
Sbjct: 321 HMK-----EYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARDSVLVFRFADVGKL 375
Query: 176 PPPVLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKG 235
PPPVL +V+FGY ++ + ++FG+D++SRVALVGPNG GKST L L+ GEL P +G
Sbjct: 376 PPPVLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGELHPTEG 435
Query: 236 KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHS 295
V R+ L+I ++ QH
Sbjct: 436 MV-------------------------------------------RRHNHLKIAQYHQHL 452
Query: 296 GEHLFPDDTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAEL 354
E L + Y+M+ F EK R +G FGL A +P+++LS GQ++RV A L
Sbjct: 453 AEKLDLELPALLYMMREFPGTEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWL 512
Query: 355 T 355
Sbjct: 513 A 513
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%)
Query: 7 KEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQS 66
K S G R RV A + +P +LLLDEPTNHLD+ + L L W L++VSHD
Sbjct: 497 KNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFR 556
Query: 67 FLNNICTDIIHLDMKKLFYYKGNFTLFKK 95
+N + +I + + + + G+ FK+
Sbjct: 557 LINQVAHEIWVCEKQCITKWNGDIMDFKR 585
>sp|O42943|YBP8_SCHPO Uncharacterized ABC transporter ATP-binding protein C16H5.08c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16H5.08c PE=1 SV=1
Length = 618
Score = 232 bits (591), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 194/367 (52%), Gaps = 62/367 (16%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
M K TK+ SGGWR+RV+L+RALF++P+LLLLDEPTNHLDL AV+WL+NYL + K L+V
Sbjct: 213 MMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLDLEAVVWLENYLAKYDKILVV 272
Query: 61 VSHDQSFLNNICTDIIHLDMKK-LFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMK 119
SH Q FLNN+CT+II L KK L YY GNF ++ + + K Y Q+++I +K
Sbjct: 273 TSHSQDFLNNVCTNIIDLTSKKQLVYYGGNFDIYMRTKEENETNQMKAYLKQQEEIAHIK 332
Query: 120 SQGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEK---PREYIVKFRFPNPPYLP 176
S ++ L QA+ + + D E L+EK PR++ F F LP
Sbjct: 333 KFIAS------AGTYANLVRQAKSKQKIIDKMEAAGLVEKPEPPRQF--SFEFDEVRKLP 384
Query: 177 PPVLGLHDVTFGYPGG--KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNK 234
PP++ +DV F Y G L ++FG+DM+SRVA+VG NG GKST LNL+ G L P +
Sbjct: 385 PPIIAFNDVAFSYDGNLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIE 444
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQH 294
G V SR + L++ K+ QH
Sbjct: 445 GNV------------SRYS-------------------------------GLKMAKYSQH 461
Query: 295 SGEHLFPDDTPCEYLMKLFNLPY-----EKSRRQLGMFGLPSYAHTIPIRDLSGGQKARV 349
S + L D +P EY+M + + ++ R LG FGL T IR LS G K+RV
Sbjct: 462 SADQLPYDKSPLEYIMDTYKPKFPERELQQWRSVLGKFGLSGLHQTSEIRTLSDGLKSRV 521
Query: 350 ALAELTL 356
A L L
Sbjct: 522 VFAALAL 528
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q + S G + RV A +P +LLLDEPTNHLD+ ++ L + W +++V
Sbjct: 506 QTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLDITSIDALAKAINVWTGGVVLV 565
Query: 62 SHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMY---VQKRKELTK 106
SHD + + ++ + KK+ + +KK VQ R K
Sbjct: 566 SHDFRLIGQVSKELWEVKDKKVVKLDCSIEEYKKSMAKEVQSRDTTAK 613
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 28/146 (19%)
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLN----------------LLKGELTPNKG 278
G++L+E L+ R L+G NG GKSTFL LL E P+
Sbjct: 87 GRLLIENATIELNHGQRYGLLGDNGSGKSTFLESVAARDVEYPEHIDSYLLNAEAEPSDV 146
Query: 279 E----LRKSPRLRIGKFDQHSGEHLFPDD-------TPCEYLMKLFNLPYE-KSRRQLGM 326
+ +S + ++ K + E DD + E L + +E K+ L
Sbjct: 147 NAVDYIIQSAKDKVQKLEAEIEELSTADDVDDVLLESKYEELDDMDPSTFEAKAAMILHG 206
Query: 327 FGLPSYAHTIPIRDLSGGQKARVALA 352
G P +D+SGG + RVAL+
Sbjct: 207 LGFTQEMMAKPTKDMSGGWRMRVALS 232
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 192 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFL 223
G++L+E L+ R L+G NG GKSTFL
Sbjct: 87 GRLLIENATIELNHGQRYGLLGDNGSGKSTFL 118
>sp|Q8T6B4|ABCF4_DICDI ABC transporter F family member 4 OS=Dictyostelium discoideum
GN=abcF4 PE=3 SV=1
Length = 1142
Score = 222 bits (565), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 196/353 (55%), Gaps = 53/353 (15%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
K ++++SGGWR+R++LARALF +P +LLLDEP+NHLDL+A +WL+ YL W +TLLVVSH
Sbjct: 756 KKSRDYSGGWRMRIALARALFCKPEVLLLDEPSNHLDLHACVWLEKYLNQWDRTLLVVSH 815
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGM 123
+ SFLN + +II++ +KL Y+GN+ F K + KE + Q++++++M ++ +
Sbjct: 816 EASFLNEVVDNIIYIHDQKLDQYRGNYDAFMKQKSVNLRSKEKEKDKQDRKLKKM-NEFI 874
Query: 124 SKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLH 183
+K K Q +QA R +K + E EL + +V FP P +L PP+L
Sbjct: 875 TKNKNNTQ------AKQAASRAKKMEKIETIELEREDASLVVD--FPQPEHLTPPLLVFK 926
Query: 184 DVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVN 243
DV FGY G + +K++ G+DM+S++ALVG NG+GKST + L+ G+L
Sbjct: 927 DVCFGYEGRPTMFKKLDIGIDMDSKIALVGMNGVGKSTLMKLMNGDLH------------ 974
Query: 244 FGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFPDD 303
E T G + +S ++R+ +F QH + L
Sbjct: 975 ----------------------------ETT---GYIERSRKMRVARFSQHFVDQLDTTM 1003
Query: 304 TPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELT 355
TP EY F N P ++ R LG FG+ + I LSGGQK+RV LAEL
Sbjct: 1004 TPIEYFQSKFNNPPVQQIRNHLGRFGICNSLPLHKITTLSGGQKSRVILAELA 1056
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV LA + EP +LLLDEPTNHLD++A+ L + + ++++SH+Q +
Sbjct: 1042 LSGGQKSRVILAELAWAEPHILLLDEPTNHLDIDAIEALAEGINAFTGGVVLISHNQHLI 1101
Query: 69 NNICTDIIHLDMKKLFY-YKGNFTLFK 94
N I I + Y Y G F +K
Sbjct: 1102 NLIAEQIWVVKKDGTIYLYPGTFMDYK 1128
>sp|Q2KJA2|ABCF2_BOVIN ATP-binding cassette sub-family F member 2 OS=Bos taurus GN=ABCF2
PE=2 SV=1
Length = 625
Score = 220 bits (560), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 192/359 (53%), Gaps = 52/359 (14%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ K K+FSGGWR+RV+LARALF+ P +LLLDEPTNHLDL+A +WL+ L+T+K+ L++
Sbjct: 223 MQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVL 282
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSH Q FLN +CT+IIH+ KKL YY GN+ + K ++ + K + ++ QI MK+
Sbjct: 283 VSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYVKTRLELEENQMKRFHWEQDQIAHMKN 342
Query: 121 QGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEK-PREYIVKFRFPNPPYLPPPV 179
A H L QA+ + + L E+ + + F FP +PPPV
Sbjct: 343 Y-----IARFGHGSAKLARQAQSKEKTLQKMMASGLTERVVSDKTLSFYFPPCGKIPPPV 397
Query: 180 LGLHDVTFGYP-GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
+ + +V+F Y G + + FG+D+++RVALVGPNG GKST L LL GEL P G +
Sbjct: 398 IMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMI- 456
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEH 298
RK ++IG++ QH E
Sbjct: 457 ------------------------------------------RKHSHVKIGRYHQHLQEQ 474
Query: 299 LFPDDTPCEYLMKLFNLPYEKS--RRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELT 355
L D +P EY+MK + EK R+ +G +GL PIR+LS GQK RV LA L
Sbjct: 475 LDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLA 533
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q + S G + RV LA + P +L LDEPTNHLD+ + L + + ++ +++V
Sbjct: 512 QVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINDFEGGMMLV 571
Query: 62 SHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKK 95
SHD + + +I + + + + G+ +K+
Sbjct: 572 SHDFRLIQQVAQEIWVCEKQTITKWPGDILAYKE 605
>sp|Q9UG63|ABCF2_HUMAN ATP-binding cassette sub-family F member 2 OS=Homo sapiens GN=ABCF2
PE=1 SV=2
Length = 623
Score = 220 bits (560), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 192/359 (53%), Gaps = 52/359 (14%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ K K+FSGGWR+RV+LARALF+ P +LLLDEPTNHLDL+A +WL+ L+T+K+ L++
Sbjct: 221 MQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVL 280
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSH Q FLN +CT+IIH+ KKL YY GN+ + K ++ + K + ++ QI MK+
Sbjct: 281 VSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYVKTRLELEENQMKRFHWEQDQIAHMKN 340
Query: 121 QGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEK-PREYIVKFRFPNPPYLPPPV 179
A H L QA+ + + L E+ + + F FP +PPPV
Sbjct: 341 Y-----IARFGHGSAKLARQAQSKEKTLQKMMASGLTERVVSDKTLSFYFPPCGKIPPPV 395
Query: 180 LGLHDVTFGYP-GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
+ + +V+F Y G + + FG+D+++RVALVGPNG GKST L LL GEL P G +
Sbjct: 396 IMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMI- 454
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEH 298
RK ++IG++ QH E
Sbjct: 455 ------------------------------------------RKHSHVKIGRYHQHLQEQ 472
Query: 299 LFPDDTPCEYLMKLFNLPYEKS--RRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELT 355
L D +P EY+MK + EK R+ +G +GL PIR+LS GQK RV LA L
Sbjct: 473 LDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLA 531
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q + S G + RV LA + P +L LDEPTNHLD+ + L + + ++ +++V
Sbjct: 510 QVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGGMMLV 569
Query: 62 SHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKK 95
SHD + + +I + + + + G+ +K+
Sbjct: 570 SHDFRLIQQVAQEIWVCEKQTITKWPGDILAYKE 603
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 27/159 (16%)
Query: 220 STFLNLLKGELTPNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGE 279
ST ++++ LT + G+ LL L+ R L+G NGIGKS L+ + P
Sbjct: 83 STDVHIINLSLTFH-GQELLSDTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEH 141
Query: 280 L------------RKSPRLRIGKFD------QHSGEHLFPDDTPCEYLMKLFNLPYE--- 318
+ K+P + + D + E L +D CE LM+L+ E
Sbjct: 142 IDIYHLTREMPPSDKTPLHCVMEVDTERAMLEKEAERLAHEDAECEKLMELYERLEELDA 201
Query: 319 -----KSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALA 352
++ R L G ++D SGG + RVALA
Sbjct: 202 DKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALA 240
>sp|Q99LE6|ABCF2_MOUSE ATP-binding cassette sub-family F member 2 OS=Mus musculus GN=Abcf2
PE=2 SV=1
Length = 628
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 192/359 (53%), Gaps = 52/359 (14%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ K K+FSGGWR+RV+LARALF+ P +LLLDEPTNHLDL+A +WL+ L+T+K+ L++
Sbjct: 226 MQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVL 285
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSH Q FLN +CT+IIH+ KKL YY GN+ + K ++ + K + ++ QI MK+
Sbjct: 286 VSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYVKTRLELEENQMKRFHWEQDQIAHMKN 345
Query: 121 QGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEK-PREYIVKFRFPNPPYLPPPV 179
A H L QA+ + + L E+ + + F FP +PPPV
Sbjct: 346 Y-----IARFGHGSAKLARQAQSKEKTLQKMMASGLTERVVSDKTLSFYFPPCGKIPPPV 400
Query: 180 LGLHDVTFGYP-GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
+ + +V+F Y G + + FG+D+++RVALVGPNG GKST L LL GEL P G +
Sbjct: 401 IMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMI- 459
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEH 298
RK ++IG++ QH E
Sbjct: 460 ------------------------------------------RKHSHVKIGRYHQHLQEQ 477
Query: 299 LFPDDTPCEYLMKLFNLPYEKS--RRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELT 355
L D +P EY+MK + EK R+ +G +GL PIR+LS GQK RV LA L
Sbjct: 478 LDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLA 536
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q + S G + RV LA + P +L LDEPTNHLD+ + L + + ++ +++V
Sbjct: 515 QVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGGMMLV 574
Query: 62 SHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKK 95
SHD + + +I + + + + G+ +K+
Sbjct: 575 SHDFRLIQQVAQEIWVCEKQTITKWPGDILAYKE 608
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 27/159 (16%)
Query: 220 STFLNLLKGELTPNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGE 279
ST ++++ LT + G+ LL L+ R L+G NGIGKS L+ + P
Sbjct: 88 STDVHIINLSLTFH-GQELLSDTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEH 146
Query: 280 L------------RKSPRLRIGKFD------QHSGEHLFPDDTPCEYLMKLFNLPYE--- 318
+ K+P + + D + E L +D CE LM+L+ E
Sbjct: 147 IDIYHLTREMPPSEKTPLQCVMEVDTERAMLEREAERLAHEDAECEKLMELYERLEELDA 206
Query: 319 -----KSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALA 352
++ R L G ++D SGG + RVALA
Sbjct: 207 DKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALA 245
>sp|Q8T6B7|ABCF2_DICDI ABC transporter F family member 2 OS=Dictyostelium discoideum
GN=abcF2 PE=3 SV=1
Length = 593
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 190/359 (52%), Gaps = 55/359 (15%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
K TK+ SGGWR+RVSLA+ALF++PTLLLLDEPTNHLDL A +WL++YL + ++L+++SH
Sbjct: 193 KKTKDLSGGWRMRVSLAKALFIKPTLLLLDEPTNHLDLGACVWLEDYLANYDRSLIIISH 252
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGM 123
Q FLN +CT+IIH+ KL YY GN+ F K + K Y Q+++I +KS
Sbjct: 253 SQDFLNAVCTNIIHMTQSKLKYYGGNYDNFVKTKAELEVNQMKAYHKQQEEIAHIKSFIA 312
Query: 124 SKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPRE-YIVKFRFPNPPYLPPPVLGL 182
S ++ L Q + + + D E L+E+ +E I F FP L PP++
Sbjct: 313 S------CGTYSNLVRQGKSKQKIIDKMEEAGLVERVQEDKIFNFSFPPCGELAPPIMHF 366
Query: 183 HDVTFGYPG--GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLE 240
+VTF Y G VL ++ +D++SR+ALVGPNG GKST L L+ G+++P +G +
Sbjct: 367 DNVTFSYSGKEADVLYRNLDLAIDLDSRIALVGPNGAGKSTLLKLMVGQISPTQGFI--- 423
Query: 241 KVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLF 300
+K L++ ++ QH+ E L
Sbjct: 424 ----------------------------------------KKHSHLKMARYHQHAHEVLD 443
Query: 301 PDDTPCEYLMKLF---NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
TP +++ F N E+ RR++G FG+ A T I +S G K+R+ + L
Sbjct: 444 LTATPLDFVRSKFAHMNKDTEEWRREIGRFGVTGKAQTEAIGCMSDGIKSRLIFCLMAL 502
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q ++ S G + R+ P LLLLDEPTNHLD+ + L + ++ +++V
Sbjct: 480 QTEAIGCMSDGIKSRLIFCLMALENPHLLLLDEPTNHLDMECIDSLALAINSFPGGMILV 539
Query: 62 SHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYEL 110
SHD ++ + +I D K + + G+ T +K + ++LTK+ L
Sbjct: 540 SHDFRLISQVAKEIWVCDNKTITKWAGDITSYKNHLKAQMRDLTKQGAL 588
>sp|Q8K268|ABCF3_MOUSE ATP-binding cassette sub-family F member 3 OS=Mus musculus GN=Abcf3
PE=1 SV=1
Length = 709
Score = 218 bits (554), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 203/360 (56%), Gaps = 57/360 (15%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ++ T+EFSGGWR+R++LARALF P LLLLDEPTN LD+ A++WL+NYLQTW T+LV
Sbjct: 320 MQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILV 379
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHD++FLN I TDIIHL ++L Y+G+F F K ++ +EYE Q+ Q R+
Sbjct: 380 VSHDRNFLNAIATDIIHLHSQRLDGYRGDFETFIKSKQERLLNQQREYEAQQ-QYRQHIQ 438
Query: 121 QGMSKEKAERQHSHKALKEQAR-KRVQKDDDDEPKELLEKPREYIVKFRFPNP-PYLPPP 178
+ + R ++++A + Q++ K ++K + +P ++K E ++K FP+ PP
Sbjct: 439 VFIDR---FRYNANRASQVQSKLKMLEKLPELKP---VDKESEVVLK--FPDGFEKFSPP 490
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
+L L +V F Y + +++ D+ESR+ +VG NG GKST L LL G+L+P +G
Sbjct: 491 ILQLDEVDFYYDPKHSIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLSPVRG--- 547
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPR-LRIGKFDQHSGE 297
+R + R L+IG F QH E
Sbjct: 548 -----------------------------------------IRHAHRNLKIGYFSQHHVE 566
Query: 298 HLFPDDTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
L + + E L + F LP E+ R QLG +G+ P+ LSGGQK+RVA A++T+
Sbjct: 567 QLDLNVSAVELLARKFPGLPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTM 626
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV+ A+ P +LDEPTNHLD+ + L L ++ +++VSHD+ F+
Sbjct: 611 LSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGQALNNFRGGVILVSHDERFI 670
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKM 96
+C ++ + + +G F ++ +
Sbjct: 671 RLVCKELWVCENGSVTRVEGGFDQYRAL 698
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 21/173 (12%)
Query: 184 DVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVN 243
DV+FG +VLL + L R LVG NG+GK+T L +L + L
Sbjct: 184 DVSFG---DRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISL---- 236
Query: 244 FGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFPDD 303
L +E VA + + ++ +L + EL S R+ G+ + L
Sbjct: 237 --LHVEQEVAGDDTPALQSVLESDTVREDLLRQEREL--SLRIAAGRAEGSEAAQL---- 288
Query: 304 TPCEYLMKLFNLPYEKSRRQ----LGMFGLPSYAHTIPIRDLSGGQKARVALA 352
E KL + +K+ + L G P R+ SGG + R+ALA
Sbjct: 289 --AEIYGKLEEIEADKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALA 339
>sp|P40024|ARB1_YEAST ABC transporter ATP-binding protein ARB1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ARB1 PE=1
SV=1
Length = 610
Score = 217 bits (553), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 195/360 (54%), Gaps = 57/360 (15%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
K TK+ SGGW++RV+LA+ALF++PTLLLLD+PT HLDL A +WL+ YL+ + +TL++VSH
Sbjct: 222 KKTKDMSGGWKMRVALAKALFVKPTLLLLDDPTAHLDLEACVWLEEYLKRFDRTLVLVSH 281
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGM 123
Q FLN +CT++I + +KL Y GN+ + K + K+Y Q+++I+ +K
Sbjct: 282 SQDFLNGVCTNMIDMRAQKLTAYGGNYDSYHKTRSELETNQMKQYNKQQEEIQHIKKFIA 341
Query: 124 SKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPR--EYIVKFRFPNPPYLPPPVLG 181
S ++ L +QA+ R QK D + L +P + + FRFP LPPPVL
Sbjct: 342 SA------GTYANLVKQAKSR-QKILDKMEADGLVQPVVPDKVFSFRFPQVERLPPPVLA 394
Query: 182 LHDVTFGYPG--GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
D++F Y + L E +NFG+DM+SR+ALVGPNG+GKST L ++ GELTP G+V
Sbjct: 395 FDDISFHYESNPSENLYEHLNFGVDMDSRIALVGPNGVGKSTLLKIMTGELTPQSGRV-- 452
Query: 240 EKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHL 299
+ +++G + QHS + L
Sbjct: 453 -----------------------------------------SRHTHVKLGVYSQHSQDQL 471
Query: 300 FPDDTPCEYLM-KLFNLP--YEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
+ E++ K N+ ++ R QLG +GL T+ + LS GQ++RV A L L
Sbjct: 472 DLTKSALEFVRDKYSNISQDFQFWRGQLGRYGLTGEGQTVQMATLSEGQRSRVVFALLAL 531
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
S G R RV A +P +LLLDEPTN LD+ + L + + + ++VVSHD L
Sbjct: 516 LSEGQRSRVVFALLALEQPNVLLLDEPTNGLDIPTIDSLADAINEFNGGVVVVSHDFRLL 575
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFK 94
+ I DI ++ K + G+ +K
Sbjct: 576 DKIAQDIFVVENKTATRWDGSILQYK 601
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 39/174 (22%)
Query: 192 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVNFGLDMESR 251
GKVL++ L+ R L+G NG GKSTFL L P + E ++ L E
Sbjct: 93 GKVLIQDSGLELNYGRRYGLLGENGCGKSTFLKALATREYP-----IPEHIDIYLLDEP- 146
Query: 252 VALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFPDDTPCEYLMK 311
+ + L+ L +T + EL++ L E +D P L++
Sbjct: 147 ---------AEPSELSALDYVVTEAQHELKRIEDLV---------EKTILEDGPESELLE 188
Query: 312 LFNLPYEK----------SRRQLGMFGLPSYAHTI--PIRDLSGGQKARVALAE 353
YE+ SR + + GL TI +D+SGG K RVALA+
Sbjct: 189 PL---YERMDSLDPDTFESRAAIILIGLGFNKKTILKKTKDMSGGWKMRVALAK 239
>sp|Q66H39|ABCF3_RAT ATP-binding cassette sub-family F member 3 OS=Rattus norvegicus
GN=Abcf3 PE=2 SV=1
Length = 709
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 202/360 (56%), Gaps = 57/360 (15%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ++ T+EFSGGWR+R++LARALF P LLLLDEPTN LD+ A++WL+NYLQTW T+LV
Sbjct: 320 MQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILV 379
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHD++FLN I TDIIHL ++L Y+G+F F K ++ +EYE Q+ Q R+
Sbjct: 380 VSHDRNFLNAIATDIIHLHSQRLDGYRGDFETFIKSKQERLLNQQREYEAQQ-QYRQHIQ 438
Query: 121 QGMSKEKAERQHSHKALKEQAR-KRVQKDDDDEPKELLEKPREYIVKFRFPNP-PYLPPP 178
+ + R ++++A + Q++ K ++K + +P ++K E ++K FP+ PP
Sbjct: 439 VFIDR---FRYNANRASQVQSKLKMLEKLPELKP---VDKESEVVLK--FPDGFEKFSPP 490
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
+L L +V F Y ++ +++ D+ESR+ +VG NG GKST L LL G+L P +G
Sbjct: 491 ILQLDEVDFYYDPKHIIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLAPVRG--- 547
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPR-LRIGKFDQHSGE 297
+R + R L+IG F QH E
Sbjct: 548 -----------------------------------------IRHAHRNLKIGYFSQHHVE 566
Query: 298 HLFPDDTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
L + + E L + F P E+ R QLG +G+ P+ LSGGQK+RVA A++T+
Sbjct: 567 QLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTM 626
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV+ A+ P +LDEPTNHLD+ + L + L ++ +++VSHD+ F+
Sbjct: 611 LSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGHALNNFRGGVVLVSHDERFI 670
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKM 96
+C ++ + + +G F ++ +
Sbjct: 671 RLVCKELWVCEKGSVTRVEGGFDQYRAL 698
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 184 DVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 226
DV+FG +VLL + L R LVG NG+GK+T L +L
Sbjct: 184 DVSFG---DRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKML 223
>sp|Q9NUQ8|ABCF3_HUMAN ATP-binding cassette sub-family F member 3 OS=Homo sapiens GN=ABCF3
PE=1 SV=2
Length = 709
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 202/360 (56%), Gaps = 57/360 (15%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ++ T+EFSGGWR+R++LARALF P LLLLDEPTN LD+ A++WL+NYLQTW T+LV
Sbjct: 320 MQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILV 379
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHD++FLN I TDIIHL ++L Y+G+F F K ++ +EYE Q+ Q R+
Sbjct: 380 VSHDRNFLNAIATDIIHLHSQRLDGYRGDFETFIKSKQERLLNQQREYEAQQ-QYRQHIQ 438
Query: 121 QGMSKEKAERQHSHKALKEQAR-KRVQKDDDDEPKELLEKPREYIVKFRFPNP-PYLPPP 178
+ + R ++++A + Q++ K ++K + +P ++K E ++K FP+ PP
Sbjct: 439 VFIDR---FRYNANRASQVQSKLKMLEKLPELKP---VDKESEVVMK--FPDGFEKFSPP 490
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
+L L +V F Y V+ +++ D+ESR+ +VG NG GKST L LL G+L P +G
Sbjct: 491 ILQLDEVDFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLLGDLAPVRG--- 547
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPR-LRIGKFDQHSGE 297
+R + R L+IG F QH E
Sbjct: 548 -----------------------------------------IRHAHRNLKIGYFSQHHVE 566
Query: 298 HLFPDDTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
L + + E L + F P E+ R QLG +G+ P+ LSGGQK+RVA A++T+
Sbjct: 567 QLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPLASLSGGQKSRVAFAQMTM 626
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV+ A+ P +LDEPTNHLD+ + L L ++ +++VSHD+ F+
Sbjct: 611 LSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNNFRGGVILVSHDERFI 670
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKM 96
+C ++ + + +G F ++ +
Sbjct: 671 RLVCRELWVCEGGGVTRVEGGFDQYRAL 698
Score = 35.4 bits (80), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 21/173 (12%)
Query: 184 DVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVN 243
DV+FG +VLL + L R LVG NG+GK+T L +L + L
Sbjct: 184 DVSFG---DRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISL---- 236
Query: 244 FGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFPDD 303
L +E VA + + ++ +L + EL + ++ G+ + L
Sbjct: 237 --LHVEQEVAGDDTPALQSVLESDSVREDLLRREREL--TAQIAAGRAEGSEAAEL---- 288
Query: 304 TPCEYLMKLFNLPYEKSRRQ----LGMFGLPSYAHTIPIRDLSGGQKARVALA 352
E KL + +K+ + L G P R+ SGG + R+ALA
Sbjct: 289 --AEIYAKLEEIEADKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALA 339
>sp|Q5R9Z5|ABCF3_PONAB ATP-binding cassette sub-family F member 3 OS=Pongo abelii GN=ABCF3
PE=2 SV=1
Length = 709
Score = 215 bits (547), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 201/360 (55%), Gaps = 57/360 (15%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ++ T+EFSGGWR+R++LARALF P LLLLDEPTN LD+ A++WL+NYLQTW T+LV
Sbjct: 320 MQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILV 379
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHD++FLN I DIIHL ++L Y+G+F F K ++ +EYE Q+ Q R+
Sbjct: 380 VSHDRNFLNAIAADIIHLHSQRLDGYRGDFETFIKSKQERLLNQQREYEAQQ-QYRQHIQ 438
Query: 121 QGMSKEKAERQHSHKALKEQAR-KRVQKDDDDEPKELLEKPREYIVKFRFPNP-PYLPPP 178
+ + R ++++A + Q++ K ++K + +P ++K E ++K FP+ PP
Sbjct: 439 VFIDR---FRYNANRASQVQSKLKMLEKLPELKP---VDKESEVVMK--FPDGFEKFSPP 490
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
+L L +V F Y V+ +++ D+ESR+ +VG NG GKST L LL G+L P +G
Sbjct: 491 ILQLDEVDFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLLGDLAPVRG--- 547
Query: 239 LEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPR-LRIGKFDQHSGE 297
+R + R L+IG F QH E
Sbjct: 548 -----------------------------------------IRHAHRNLKIGYFSQHHVE 566
Query: 298 HLFPDDTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
L + + E L + F P E+ R QLG +G+ P+ LSGGQK+RVA A++T+
Sbjct: 567 QLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTM 626
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV+ A+ P +LDEPTNHLD+ + L L ++ +++VSHD+ F+
Sbjct: 611 LSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNNFRGGVILVSHDERFI 670
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKM 96
+C ++ + + +G F ++ +
Sbjct: 671 RLVCRELWVCEGGGVTRVEGGFDQYRAL 698
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 184 DVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVN 243
DV+FG +VLL + L R LVG NG+GK+T L +L + L
Sbjct: 184 DVSFG---DRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISL---- 236
Query: 244 FGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFPDD 303
L +E VA + + ++ +L + EL S + G+ + L
Sbjct: 237 --LHVEQEVAEDDTPALQSVLESDSVREDLLRREREL--SAHIAAGRVEGSEAAEL---- 288
Query: 304 TPCEYLMKLFNLPYEKSRRQ----LGMFGLPSYAHTIPIRDLSGGQKARVALA 352
E KL + +K+ + L G P R+ SGG + R+ALA
Sbjct: 289 --AEIYAKLEEIEADKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALA 339
>sp|Q9USH9|YJQ1_SCHPO Uncharacterized ABC transporter ATP-binding protein C825.01
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC825.01 PE=1 SV=1
Length = 822
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 197/361 (54%), Gaps = 50/361 (13%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYL--QTWKKTL 58
M K T E SGGWR+R++LAR LF++PTL++LDEPTNHLDL AV WL+ YL + TL
Sbjct: 413 MIAKRTNELSGGWRMRIALARILFIKPTLMMLDEPTNHLDLEAVAWLEEYLTHEMEGHTL 472
Query: 59 LVVSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREM 118
L+ H Q LN +CTDIIHL +KL YY GN+ F K+ ++ +L K+ QEK + ++
Sbjct: 473 LITCHTQDTLNEVCTDIIHLYHQKLDYYSGNYDTFLKVRAERDVQLAKKARQQEKDMAKL 532
Query: 119 KSQGMSKEKAERQHSHKALKEQARKRVQKDDDDEP--KELLEKPREYIVKFRFPNPPYLP 176
+++ ++ +E+Q KA + K+++KD E + + ++ +++F +P
Sbjct: 533 QNK-LNMTGSEQQKKAKAKVKAMNKKLEKDKQSGKVLDEEIIQEKQLVIRFEDCGGG-IP 590
Query: 177 PPVLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGK 236
P + DV+F YPGG + K+NFGLD++SRVALVGPNG GK+T + K
Sbjct: 591 SPAIKFQDVSFNYPGGPTIFSKLNFGLDLKSRVALVGPNGAGKTTLI------------K 638
Query: 237 VLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSG 296
++LEKV P+ G + + LR+ F+QH G
Sbjct: 639 LILEKVQ-------------------------------PSTGSVVRHHGLRLALFNQHMG 667
Query: 297 EHLFPDDTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELT 355
+ L + E+L F N P + RR +G +GL + IP+ LS GQ+ RV A L
Sbjct: 668 DQLDMRLSAVEWLRTKFGNKPEGEMRRIVGRYGLTGKSQVIPMGQLSDGQRRRVLFAFLG 727
Query: 356 L 356
+
Sbjct: 728 M 728
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 8 EFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSF 67
+ S G R RV A +P +LLLDEPTN LD++ + L + L + ++ ++HD
Sbjct: 712 QLSDGQRRRVLFAFLGMTQPHILLLDEPTNALDIDTIDALADALNNFDGGVVFITHDFRL 771
Query: 68 LNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQK 100
++ + +I + + + G +K M Q+
Sbjct: 772 IDQVAEEIWIVQNGTVKEFDGEIRDYKMMLKQQ 804
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 192 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTP 232
GK+L++ L R L+ PNG GKST L+ + L P
Sbjct: 287 GKLLIKDSELNLINGRRYGLIAPNGSGKSTLLHAIACGLIP 327
>sp|P43535|GCN20_YEAST Protein GCN20 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GCN20 PE=1 SV=1
Length = 752
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 194/358 (54%), Gaps = 55/358 (15%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q++ T FSGGWR+R+SLARALF +P LLLLDEP+N LD+ ++ +L YL+T+ T+L V
Sbjct: 361 QQQPTNSFSGGWRMRLSLARALFCQPDLLLLDEPSNMLDVPSIAYLAEYLKTYPNTVLTV 420
Query: 62 SHDQSFLNNICTDIIHLDMKKLFYYKG-NFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
SHD++FLN + TDII+ ++L YY+G +F F ++RK +EY+ Q M
Sbjct: 421 SHDRAFLNEVATDIIYQHNERLDYYRGQDFDTFYTTKEERRKNAQREYDNQ------MVY 474
Query: 121 QGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKP-REYIVKFRFPNPPYLPPPV 179
+ +E ++ + A ++A+ R++K E +LE P ++ + F+FP L PP+
Sbjct: 475 RKHLQEFIDKYRYNAAKSQEAQSRIKK---LEKLPVLEPPEQDKTIDFKFPECDKLSPPI 531
Query: 180 LGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
+ L DV+FGY +LL+ VN + M+SR+ALVG NG GK+T L ++ +L P KG V
Sbjct: 532 IQLQDVSFGYDENNLLLKDVNLDVQMDSRIALVGANGCGKTTLLKIMMEQLRPLKGFV-- 589
Query: 240 EKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHL 299
++PRLRIG F QH + +
Sbjct: 590 -----------------------------------------SRNPRLRIGYFTQHHVDSM 608
Query: 300 FPDDTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
+ +++ K F E+ RR LG FG+ ++ LSGGQK+RVA A L L
Sbjct: 609 DLTTSAVDWMSKSFPGKTDEEYRRHLGSFGITGTLGLQKMQLLSGGQKSRVAFAALCL 666
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV+ A P +L+LDEP+NHLD + L L+ + +L+VSHD S +
Sbjct: 651 LSGGQKSRVAFAALCLNNPHILVLDEPSNHLDTTGLDALVEALKNFNGGVLMVSHDISVI 710
Query: 69 NNICTDI 75
+++C +I
Sbjct: 711 DSVCKEI 717
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 215 NGIGKSTFLNLLKGELTPNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 269
+ GKS +++ +L G+ +L L R LVG NGIGKST L L
Sbjct: 191 SSAGKSKDIHIDTFDLYVGDGQRILSNAQLTLSFGHRYGLVGQNGIGKSTLLRAL 245
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 182 LHDVTFG-YPG-GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 226
+H TF Y G G+ +L L R LVG NGIGKST L L
Sbjct: 199 IHIDTFDLYVGDGQRILSNAQLTLSFGHRYGLVGQNGIGKSTLLRAL 245
>sp|O59672|YB89_SCHPO Uncharacterized ABC transporter ATP-binding protein C29A3.09c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC29A3.09c PE=3 SV=1
Length = 736
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 185/358 (51%), Gaps = 54/358 (15%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
MQ +TK FSGGWR+R+SLARALF +P LLLLDEP+N LD+ ++ +L YLQT+K +LV
Sbjct: 347 MQSHATKTFSGGWRMRLSLARALFCQPDLLLLDEPSNMLDVPSIAFLSEYLQTYKNIVLV 406
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHD+SFLN + TDIIH ++L YYKGNF+ F ++ K +EYE Q + + ++S
Sbjct: 407 VSHDRSFLNEVATDIIHQHSERLDYYKGNFSQFYATREERCKNQLREYEKQMEYRKHLQS 466
Query: 121 QGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPY-LPPPV 179
++ + A +A+ R++K E +LEKP+ P + PP+
Sbjct: 467 ------FIDKFRYNAAKSSEAQSRIKK---LEKLPILEKPQTEEEVEFEFPPVEKISPPI 517
Query: 180 LGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
L + DV F Y G +L+ V+ + M+SR+ +VGPNG GKST L LL +L P G V
Sbjct: 518 LQMSDVNFEYVPGHPILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSGIV-- 575
Query: 240 EKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHL 299
+ PRLRI F QH + L
Sbjct: 576 -----------------------------------------SRHPRLRIAYFAQHHVDTL 594
Query: 300 FPDDTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
+ +L K F E+ RR LG FG+ + LSGGQK+RVA A L L
Sbjct: 595 DLNLNALSFLAKTFPGKGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSRVAFACLGL 652
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + RV+ A P +L+LDEPTNHLD+ ++ L ++ ++ +++VSHD FL
Sbjct: 637 LSGGQKSRVAFACLGLQNPHILILDEPTNHLDMESMDALTRAVKRFQGGVILVSHDVDFL 696
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELT 105
+ CT I D + + G + +KK + ++ +T
Sbjct: 697 DKTCTSIWQCDHNVVSKFDGTISQYKKFCLSQQPTMT 733
>sp|P63389|YHES_ECOLI Uncharacterized ABC transporter ATP-binding protein YheS
OS=Escherichia coli (strain K12) GN=yheS PE=1 SV=1
Length = 637
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 184/352 (52%), Gaps = 55/352 (15%)
Query: 3 EKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVS 62
E+ +FSGGWR+R++LA+AL LLLLDEPTNHLDL+AVIWL+ +L++++ TL+++S
Sbjct: 144 ERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILIS 203
Query: 63 HDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQG 122
HD+ FL+ I IIH++ + +F Y GN++ F+ + + YE Q++++ ++S
Sbjct: 204 HDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQS-- 261
Query: 123 MSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPR-EYIVKFRFPNPPYLPPPVLG 181
+R + +QA+ R++ E EL+ + +F F P LP P+L
Sbjct: 262 ----YIDRFRAKATKAKQAQSRIKM---LERMELIAPAHVDNPFRFSFRAPESLPNPLLK 314
Query: 182 LHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEK 241
+ V+ GY G +++L+ + L SR+ L+G NG GKST + LL GEL P G++
Sbjct: 315 MEKVSAGY-GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEI---- 369
Query: 242 VNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFP 301
L KG +++G F QH E+L
Sbjct: 370 -------------------------GLAKG--------------IKLGYFAQHQLEYLRA 390
Query: 302 DDTPCEYLMKLFNLPYE-KSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALA 352
D++P ++L +L E K R LG FG T R SGG+KAR+ LA
Sbjct: 391 DESPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLA 442
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
+ T+ FSGG + R+ LA ++ P LLLLDEPTNHLDL+ L L ++ L+VVSH
Sbjct: 426 EETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSH 485
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMY--VQKRKELTKEYELQEKQIREMKSQ 121
D+ L + D+ + +K+ + G+ +++ VQK++ T E + + +
Sbjct: 486 DRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKD 545
Query: 122 GMSKEKAERQHSHKALKEQAR 142
+E R + KE AR
Sbjct: 546 QKRREAELRAQTQPLRKEIAR 566
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKG 235
G +VLL+ ++ +V LVG NG GKST L LLK E++ + G
Sbjct: 12 GVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGG 56
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 236 KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKG 278
+VLL+ ++ +V LVG NG GKST L LLK E++ + G
Sbjct: 14 RVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGG 56
>sp|P63390|YHES_ECO57 Uncharacterized ABC transporter ATP-binding protein YheS
OS=Escherichia coli O157:H7 GN=yheS PE=3 SV=1
Length = 637
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 184/352 (52%), Gaps = 55/352 (15%)
Query: 3 EKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVS 62
E+ +FSGGWR+R++LA+AL LLLLDEPTNHLDL+AVIWL+ +L++++ TL+++S
Sbjct: 144 ERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILIS 203
Query: 63 HDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQG 122
HD+ FL+ I IIH++ + +F Y GN++ F+ + + YE Q++++ ++S
Sbjct: 204 HDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQS-- 261
Query: 123 MSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPR-EYIVKFRFPNPPYLPPPVLG 181
+R + +QA+ R++ E EL+ + +F F P LP P+L
Sbjct: 262 ----YIDRFRAKATKAKQAQSRIKM---LERMELIAPAHVDNPFRFSFRAPESLPNPLLK 314
Query: 182 LHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEK 241
+ V+ GY G +++L+ + L SR+ L+G NG GKST + LL GEL P G++
Sbjct: 315 MEKVSAGY-GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEI---- 369
Query: 242 VNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFP 301
L KG +++G F QH E+L
Sbjct: 370 -------------------------GLAKG--------------IKLGYFAQHQLEYLRA 390
Query: 302 DDTPCEYLMKLFNLPYE-KSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALA 352
D++P ++L +L E K R LG FG T R SGG+KAR+ LA
Sbjct: 391 DESPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLA 442
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
+ T+ FSGG + R+ LA ++ P LLLLDEPTNHLDL+ L L ++ L+VVSH
Sbjct: 426 EETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSH 485
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMY--VQKRKELTKEYELQEKQIREMKSQ 121
D+ L + D+ + +K+ + G+ +++ VQK++ T E + + +
Sbjct: 486 DRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKD 545
Query: 122 GMSKEKAERQHSHKALKEQAR 142
+E R + KE AR
Sbjct: 546 QKRREAELRAQTQPLRKEIAR 566
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKG 235
G +VLL+ ++ +V LVG NG GKST L LLK E++ + G
Sbjct: 12 GVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGG 56
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 236 KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKG 278
+VLL+ ++ +V LVG NG GKST L LLK E++ + G
Sbjct: 14 RVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGG 56
>sp|Q8SRV5|ABCF3_ENCCU Probable ATP-binding cassette sub-family F member 3 homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU05_1190
PE=3 SV=1
Length = 554
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 182/352 (51%), Gaps = 58/352 (16%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
M K+ ++ SGGWR+R LA+A+ +P LLLLDEPTN+LD+NA+ WL+ ++ KT+++
Sbjct: 182 MAVKNMRDLSGGWRMRAHLAKAINADPDLLLLDEPTNYLDINALSWLEGKIKEL-KTVII 240
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHD++FLNN I+HL+ K+ Y+GN+ F K +K +EYE Q +RE
Sbjct: 241 VSHDRNFLNNTTEMILHLNDLKIDVYRGNYESFVKQRKEKTASARREYESQ-LLVREHMQ 299
Query: 121 QGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVL 180
+ + R ++ +A Q++ ++ + L+ ++ ++KF F + P ++
Sbjct: 300 SFIDR---FRYNAKRASLVQSKIKMLA----KMPTLVAPKQDPVIKFTFSSTP-AQGALI 351
Query: 181 GLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLE 240
+V F Y GKV L ++ ++ +SR+ +VG NG GKSTFL LL G+L +G ++
Sbjct: 352 EFVNVVFSYGCGKV-LGGLSMKINSDSRIVVVGANGQGKSTFLKLLAGKLEATEGSII-- 408
Query: 241 KVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLF 300
++P LR+G F QH +HL
Sbjct: 409 -----------------------------------------RAPSLRVGYFAQHHIDHLR 427
Query: 301 PDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALA 352
++ +++MK + E++RR L FGL I LSGGQK+R+ A
Sbjct: 428 VNENVLDFMMKSYT--QEEARRALASFGLSVDNQCIGT--LSGGQKSRLGFA 475
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + R+ A L P LL+LDEPTNHLD+ ++ L L + ++ VSHD SF+
Sbjct: 464 LSGGQKSRLGFAIINGLSPNLLVLDEPTNHLDMESIDALAEALGRFNGAVVCVSHDLSFI 523
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKK 95
++ +I + + + G+ +KK
Sbjct: 524 SSAFREIYICEDGSIRRFYGDILEYKK 550
>sp|P44808|Y658_HAEIN Uncharacterized ABC transporter ATP-binding protein HI_0658
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=HI_0658 PE=1 SV=1
Length = 638
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 172/351 (49%), Gaps = 55/351 (15%)
Query: 6 TKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQ 65
K FSGGWR+R++LA+AL LLLLDEPTNHLDL+AVIWL+ +L ++ TL+++SHD+
Sbjct: 147 VKAFSGGWRMRLNLAQALLCPSDLLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISHDR 206
Query: 66 SFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSK 125
FL+ I T I+H++ +KL Y G+++ F+ K + T Y Q+++I ++
Sbjct: 207 DFLDPIVTKILHIENQKLNEYTGDYSSFEVQRATKLAQQTAMYRQQQQKISHLQKYIDRF 266
Query: 126 EKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYI---VKFRFPNPPYLPPPVLGL 182
+ + + +A +R++ L P Y+ F F P LP P++ +
Sbjct: 267 KAKATKAKQAQSRMKALERME----------LIAP-AYVDNPFTFEFRPPQSLPNPLVMI 315
Query: 183 HDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKV 242
+ GY GIG+S +L K+
Sbjct: 316 EQASAGY--------------------------GIGESAV--------------EILSKI 335
Query: 243 NFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFPD 302
L SR+ L+G NG GKST + LL GELT G ++ + +++G F QH + L D
Sbjct: 336 KLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRAD 395
Query: 303 DTPCEYLMKLFNLPYEKSRRQ-LGMFGLPSYAHTIPIRDLSGGQKARVALA 352
++ ++ KL E+ R LG F ++ SGG+KAR+ LA
Sbjct: 396 ESALWHMQKLAPEQTEQQVRDYLGSFAFHGDKVNQAVKSFSGGEKARLVLA 446
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
++ K FSGG + R+ LA ++ P LLLLDEPTNHLDL+ L L ++ +L+VVSH
Sbjct: 430 QAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDYEGSLVVVSH 489
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGM 123
D+ L N + + KK+ +KG+ ++K ++ T E ++ EK S
Sbjct: 490 DRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLSEQNS--TSENKVSEKVGDNENSVQN 547
Query: 124 SKEKAERQHSHKALKEQARKRV 145
KE+ R+ + RK++
Sbjct: 548 RKEQKRREAELRQQTAPLRKKI 569
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 238 LLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHS 295
LLE + ++ + +V LVG NG GKS+ LLK EL P GE+ R+ +Q +
Sbjct: 16 LLENASATINPKQKVGLVGKNGCGKSSLFALLKKELMPEGGEVNYPANWRVSWVNQET 73
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
G LLE + ++ + +V LVG NG GKS+ LLK EL P G+V
Sbjct: 12 GQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELMPEGGEV 58
>sp|Q08972|NEW1_YEAST [NU+] prion formation protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NEW1 PE=1 SV=1
Length = 1196
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 131/303 (43%), Gaps = 103/303 (33%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYL-QTWKKTLLVVS 62
++ SGGW++++ LARA+ + +LLLDEPTNHLD++ V WL+ YL + T L+VS
Sbjct: 683 QTVGSLSGGWKMKLELARAMLQKADILLLDEPTNHLDVSNVKWLEEYLLEHTDITSLIVS 742
Query: 63 HDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQG 122
HD FL+ +CTDIIH + KKL YYKGN F V+++ E Y L +
Sbjct: 743 HDSGFLDTVCTDIIHYENKKLAYYKGNLAAF----VEQKPEAKSYYTLTDSN-------- 790
Query: 123 MSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPP----- 177
+ RFP P L
Sbjct: 791 ------------------------------------------AQMRFPPPGILTGVKSNT 808
Query: 178 -PVLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGK 236
V + DVTF YPG + K
Sbjct: 809 RAVAKMTDVTFSYPGAQ------------------------------------------K 826
Query: 237 VLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSG 296
L V+ L + SRVA +GPNG GKST + LL GEL PN+G++ K P LRIG QH+
Sbjct: 827 PSLSHVSCSLSLSSRVACLGPNGAGKSTLIKLLTGELVPNEGKVEKHPNLRIGYIAQHAL 886
Query: 297 EHL 299
+H+
Sbjct: 887 QHV 889
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG ++V +A A++ P LL+LDEPTN+LD +++ L ++ W ++++SH+ F+
Sbjct: 1033 LSGGQLVKVVIAGAMWNNPHLLVLDEPTNYLDRDSLGALAVAIRDWSGGVVMISHNNEFV 1092
Query: 69 NNIC 72
+C
Sbjct: 1093 GALC 1096
>sp|O14134|ELF1_SCHPO mRNA export factor elf1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=elf1 PE=1 SV=1
Length = 1057
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 124/251 (49%), Gaps = 67/251 (26%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKK-TLL 59
MQE SGGW++++ LARA+ + +LLLDEPTNHLD+ + WL+ YL + K T L
Sbjct: 555 MQENPVASLSGGWKMKLELARAMLQKADILLLDEPTNHLDVANIAWLEAYLTSQKNITCL 614
Query: 60 VVSHDQSFLNNICTDIIHLD-----MKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQ 114
+VSHD SFL+++CTDIIH + KKL YY+GN + F K+
Sbjct: 615 IVSHDSSFLDHVCTDIIHYEGVKNQAKKLGYYQGNLSAFVKV------------------ 656
Query: 115 IREMKSQGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPY 174
K +A+ ++ A E KF FP P
Sbjct: 657 ----------KPEAKSYYTLTATNE--------------------------KFVFPPPGI 680
Query: 175 LPPP------VLGLHDVTFGYPGG-KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLK 227
L +L + + ++ YP K L+ V GL + SRVA++GPNG GKST + +L
Sbjct: 681 LTGVRSNTRLILKMTNASYTYPNAKKKSLDNVTVGLSLSSRVAILGPNGAGKSTLIKVLI 740
Query: 228 GELTPNKGKVL 238
GE+ P +GKV
Sbjct: 741 GEVIPQEGKVF 751
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 232 PNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKF 291
PN K L+ V GL + SRVA++GPNG GKST + +L GE+ P +G++ K P LR+G
Sbjct: 702 PNAKKKSLDNVTVGLSLSSRVAILGPNGAGKSTLIKVLIGEVIPQEGKVFKHPNLRVGYV 761
Query: 292 DQHSGEHL--FPDDTPCEYL 309
QH+ HL + TP +Y+
Sbjct: 762 AQHAFHHLDQHLEKTPSQYI 781
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 50/75 (66%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG +++V +A L+ P LL+LDEPTN LD +A+ L ++ W+ ++++SH++ F+
Sbjct: 911 LSGGQKVKVVIAACLWNNPQLLVLDEPTNFLDRDALGGLAVAIRDWEGGVVMISHNEEFV 970
Query: 69 NNICTDIIHLDMKKL 83
+ +C + H++ K+
Sbjct: 971 SALCPEHWHVEAGKV 985
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 21/133 (15%)
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL---KGELTPNKGELRKSPRLRIGKF 291
G++LL N L R +VG NG GKST L + K E P+ E++ F
Sbjct: 456 GRLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAIGDYKVENFPSPDEVKTC-------F 508
Query: 292 DQHSGEHLFPDDTPCEYL--------MKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSG 343
HS L +DT L + N+ +++ L G + P+ LSG
Sbjct: 509 VAHS---LQGEDTSMAILDFVAQDKALLTMNVTRQEAADALHSVGFTAEMQENPVASLSG 565
Query: 344 GQKARVALAELTL 356
G K ++ LA L
Sbjct: 566 GWKMKLELARAML 578
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 184 DVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 226
D + Y GG++LL N L R +VG NG GKST L +
Sbjct: 449 DFSLAY-GGRLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAI 490
>sp|O05519|YDIF_BACSU Uncharacterized ABC transporter ATP-binding protein YdiF
OS=Bacillus subtilis (strain 168) GN=ydiF PE=3 SV=2
Length = 642
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 168/354 (47%), Gaps = 56/354 (15%)
Query: 6 TKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQ 65
+ SGG + R++L + L +P LL+LDEPTNHLD++ + WL++YLQ + +L+VSHD+
Sbjct: 160 VQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDTLTWLEHYLQGYSGAILIVSHDR 219
Query: 66 SFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREM-KSQGMS 124
FL+ + + + + Y GN++ + QK + K+ ++ EKQ E+ K Q
Sbjct: 220 YFLDKVVNQVYEVSRAESKKYHGNYSAYLD---QKAAQYEKDLKMYEKQQDEIAKLQDFV 276
Query: 125 KEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKP--REYIVKFRFPNPPYLPPPVLGL 182
R + K + + RK++++ D ++ KP E F F VL +
Sbjct: 277 DRNLARASTTKRAQSR-RKQLERMD------VMSKPLGDEKSANFHFDITKQSGNEVLRV 329
Query: 183 HDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKV 242
D+T Y LL +V+F L ALVGPNGIGKST L L L P++G +
Sbjct: 330 QDLTISYENQPPLLTEVSFMLTRGESAALVGPNGIGKSTLLKTLIDTLKPDQG-----TI 384
Query: 243 NFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFPD 302
++G S V++ G + EL S R+ +D++ G
Sbjct: 385 SYG----SNVSV----------------GYYDQEQAELTSSKRVLDELWDEYPG------ 418
Query: 303 DTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
LP ++ R LG F P+ LSGG+KAR+ALA+L L
Sbjct: 419 ------------LPEKEIRTCLGNFLFSGDDVLKPVHSLSGGEKARLALAKLML 460
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
K SGG + R++LA+ + + L+LDEPTNHLDL++ L+N L + TLL VSH
Sbjct: 440 KPVHSLSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSH 499
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKE 103
D+ F+N I T ++ L + Y G++ Y +K+ E
Sbjct: 500 DRYFINRIATRVLELSSSHIEEYLGDY----DYYTEKKTE 535
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 42/164 (25%)
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQH 294
+L + + R+A+VG NG GKST L ++ G+L+ KGE+ K + +G QH
Sbjct: 15 ADTILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIAGQLSYEKGEIIKPKDITMGYLAQH 74
Query: 295 SG---------------EHL---------------FPDDTPCEYLMKLFN---------- 314
+G +HL D E +MK ++
Sbjct: 75 TGLDSKLTIKEELLTVFDHLKAMEKEMRAMEEKMAAADPGELESIMKTYDRLQQEFKDKG 134
Query: 315 -LPYEKSRRQ-LGMFGLPSYAHTIPIRDLSGGQKARVALAELTL 356
YE R L G + + ++ LSGGQK R+AL +L L
Sbjct: 135 GYQYEADVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLLL 178
>sp|O93796|EF3_CANGA Elongation factor 3 OS=Candida glabrata (strain ATCC 2001 / CBS 138
/ JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TEF3 PE=3 SV=2
Length = 1045
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 116/236 (49%), Gaps = 61/236 (25%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGGW+++++LARA+ +LLLDEPTNHLD V WL NYL T T ++VSHD FL
Sbjct: 544 LSGGWKMKLALARAVLKNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSVIVSHDSGFL 603
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
+N+C IIH + KL YKGN + F V+K YEL G S
Sbjct: 604 DNVCQYIIHYEGLKLRKYKGNLSEF----VKKCPTAQSYYEL-----------GASD--- 645
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLP------PPVLGL 182
++F+FP P YL ++ +
Sbjct: 646 ------------------------------------LEFKFPEPGYLEGVKTKQKAIVKV 669
Query: 183 HDVTFGYPG-GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
++TF YPG K + ++F + SR+A++GPNG GKST +N+L GEL P G+V
Sbjct: 670 SNMTFQYPGTSKPQISDISFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEV 725
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 232 PNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKF 291
P K + ++F + SR+A++GPNG GKST +N+L GEL P GE+ RI
Sbjct: 677 PGTSKPQISDISFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYI 736
Query: 292 DQHSGEHLFP--DDTPCEYLMKLF 313
QH+ H+ D TP EY+ F
Sbjct: 737 KQHAFAHIESHLDKTPSEYIQWRF 760
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 42/67 (62%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG ++++ LA + P L++LDEPTN+LD +++ L L+ ++ +++++H F
Sbjct: 897 LSGGQKVKLVLAACSWQRPHLIVLDEPTNYLDRDSLGALSKALKAFEGGVIIITHSAEFT 956
Query: 69 NNICTDI 75
N+ ++
Sbjct: 957 KNLTEEV 963
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRK--SPRLRIGKFD 292
K+LL K L R L GPNG GKST + + G++ +P + +
Sbjct: 442 AKILLNKTQLRLKRGRRYGLCGPNGAGKSTLMRAIA------NGQVDGFPTPEECMTVYV 495
Query: 293 QHSGEHLFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALA 352
+H + D + ++++ E +L FG +PI LSGG K ++ALA
Sbjct: 496 EHDIDGTHADTSVLDFVVSSEVGTKEAITAKLVEFGFTEEMINMPISSLSGGWKMKLALA 555
Query: 353 ELTL 356
L
Sbjct: 556 RAVL 559
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 226
G K+LL K L R L GPNG GKST + +
Sbjct: 441 GAKILLNKTQLRLKRGRRYGLCGPNGAGKSTLMRAI 476
>sp|P53978|EF3B_YEAST Elongation factor 3B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HEF3 PE=1 SV=2
Length = 1044
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 117/244 (47%), Gaps = 61/244 (25%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
M E SGGW+++++LARA+ + +LLLDEPTNHLD V WL NYL T T ++
Sbjct: 536 MIEMPIASLSGGWKMKLALARAVLKDADILLLDEPTNHLDTVNVEWLVNYLNTCGITSVI 595
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKS 120
VSHD FL+ +C IIH + KL YKGN + F VQK YEL
Sbjct: 596 VSHDSGFLDKVCQYIIHYEGLKLRKYKGNLSEF----VQKCPTAQSYYEL---------- 641
Query: 121 QGMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLP---- 176
G S ++F+FP P YL
Sbjct: 642 -GASD---------------------------------------LEFQFPTPGYLEGVKT 661
Query: 177 --PPVLGLHDVTFGYPG-GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPN 233
++ + ++TF YPG K + V F + SR+A++GPNG GKST +N+L GEL P
Sbjct: 662 KQKAIVKVSNMTFQYPGTTKPQVSDVTFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPT 721
Query: 234 KGKV 237
G+V
Sbjct: 722 SGEV 725
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 232 PNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKF 291
P K + V F + SR+A++GPNG GKST +N+L GEL P GE+ RI
Sbjct: 677 PGTTKPQVSDVTFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYI 736
Query: 292 DQHSGEHLFP--DDTPCEYLMKLF 313
QH+ H+ D TP EY+ F
Sbjct: 737 KQHAFAHIESHLDKTPSEYIQWRF 760
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 42/67 (62%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG ++++ LA + P L++LDEPTN+LD +++ L L+ ++ +++++H F
Sbjct: 897 LSGGQKVKLVLAACTWQRPHLIVLDEPTNYLDRDSLGALSKALKAFEGGVIIITHSAEFT 956
Query: 69 NNICTDI 75
N+ ++
Sbjct: 957 KNLTDEV 963
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFL-NLLKGELT--PNKGELRKSPRLRIGKF 291
K+LL K L R L GPNG GKST + ++ G++ P + E R +
Sbjct: 442 AKILLNKTQLRLKRGRRYGLCGPNGAGKSTLMRSIANGQVDGFPTQDECRTV-------Y 494
Query: 292 DQHSGEHLFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVAL 351
+H ++ D + +++ + +L FG +PI LSGG K ++AL
Sbjct: 495 VEHDIDNTHSDMSVLDFVYSGNVGTKDVITSKLKEFGFSDEMIEMPIASLSGGWKMKLAL 554
Query: 352 AELTL 356
A L
Sbjct: 555 ARAVL 559
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFL 223
G K+LL K L R L GPNG GKST +
Sbjct: 441 GAKILLNKTQLRLKRGRRYGLCGPNGAGKSTLM 473
>sp|Q75EV6|EF3_ASHGO Elongation factor 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=TEF3 PE=3 SV=2
Length = 1044
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 116/236 (49%), Gaps = 61/236 (25%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGGW+++++LARA+ +LLLDEPTNHLD V WL NYL T T ++VSHD FL
Sbjct: 544 LSGGWKMKLALARAVLKNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSIIVSHDSGFL 603
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
+N+C IIH + KL YKGN + F V+K YEL G S
Sbjct: 604 DNVCQYIIHYEGLKLRKYKGNLSEF----VKKCPTAKSYYEL-----------GASD--- 645
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLP------PPVLGL 182
++F+FP P +L ++ +
Sbjct: 646 ------------------------------------LEFKFPEPGFLEGVKTKQKAIVKV 669
Query: 183 HDVTFGYPG-GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
+++F YPG K + +NF + SR+A++GPNG GKST +N+L GEL P G+V
Sbjct: 670 SNMSFQYPGTSKPQIADINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTTGEV 725
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 232 PNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKF 291
P K + +NF + SR+A++GPNG GKST +N+L GEL P GE+ RI
Sbjct: 677 PGTSKPQIADINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTTGEVYTHENCRIAYI 736
Query: 292 DQHSGEHL--FPDDTPCEYLMKLF 313
QH+ H+ D TP EY+ F
Sbjct: 737 KQHAFAHIENHLDKTPSEYIQWRF 760
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 42/67 (62%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG ++++ LA + P L++LDEPTN+LD +++ L L+ ++ +++++H F
Sbjct: 897 LSGGQKVKLVLAACTWQRPHLIVLDEPTNYLDRDSLGALSKALKAFEGGVIIITHSAEFT 956
Query: 69 NNICTDI 75
++ ++
Sbjct: 957 KDLTEEV 963
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLN-LLKGELT--PNKGELRKSPRLRIGKF 291
K+LL K L R L GPNG GKST + + G++ P + E R +
Sbjct: 442 AKILLNKTQLRLKRARRYGLCGPNGAGKSTLMRAIANGQVDGFPTQDECRTV-------Y 494
Query: 292 DQHSGEHLFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVAL 351
+H + D + +++ + E +L FG +PI LSGG K ++AL
Sbjct: 495 VEHDIDGTQADTSVLDFVFQGDVGTREVITEKLREFGFSDEMIAMPIMSLSGGWKMKLAL 554
Query: 352 AELTL 356
A L
Sbjct: 555 ARAVL 559
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 226
G K+LL K L R L GPNG GKST + +
Sbjct: 441 GAKILLNKTQLRLKRARRYGLCGPNGAGKSTLMRAI 476
>sp|P25997|EF3_CANAL Elongation factor 3 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=CEF3 PE=1 SV=2
Length = 1050
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 119/242 (49%), Gaps = 61/242 (25%)
Query: 7 KEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQS 66
+ SGGW+++++LARA+ +LLLDEPTNHLD V WL NYL T T ++VSHD
Sbjct: 547 QSLSGGWKMKLALARAVLKNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSIIVSHDSG 606
Query: 67 FLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKE 126
FL+N+ IIH + KL YKGN + F V+K YEL G S
Sbjct: 607 FLDNVTQYIIHYEGFKLRKYKGNLSEF----VKKCPSAQSYYEL-----------GASD- 650
Query: 127 KAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLP------PPVL 180
++FRFP P +L ++
Sbjct: 651 --------------------------------------LEFRFPEPGFLEGVKTKQKAIV 672
Query: 181 GLHDVTFGYPG-GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
+ +++F YPG K ++ +NF + SR+A++GPNG GKST +N+L GEL P G+V +
Sbjct: 673 KVSNMSFQYPGTSKPQIQDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTTGEVYV 732
Query: 240 EK 241
+
Sbjct: 733 HE 734
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 232 PNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKF 291
P K ++ +NF + SR+A++GPNG GKST +N+L GEL P GE+ RI
Sbjct: 682 PGTSKPQIQDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTTGEVYVHENCRIAYI 741
Query: 292 DQHSGEHL--FPDDTPCEYLMKLF 313
QH+ H+ D TP EY+ F
Sbjct: 742 KQHAFAHIDNHLDKTPSEYIQWRF 765
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 12/127 (9%)
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKG---ELTPNKGELRKSPRLRIGKF 291
K+LL K F L R L GPNG GKST + + E P + E + +
Sbjct: 445 AKILLNKTQFRLKRNRRYGLCGPNGAGKSTLMRAIANGQVEGFPTQDECKTV-------Y 497
Query: 292 DQHSGEHLFPDDTPCEYLMK--LFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARV 349
+H + D T E++++ L + +L F +PI+ LSGG K ++
Sbjct: 498 VEHDIDGTHADTTVVEFVIEDGEVGLTKDVVVDKLREFNFSDEMINMPIQSLSGGWKMKL 557
Query: 350 ALAELTL 356
ALA L
Sbjct: 558 ALARAVL 564
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 42/67 (62%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG ++++ LA + P L++LDEPTN+LD +++ L L+ ++ +++++H F
Sbjct: 902 LSGGQKVKLVLAACTWQRPHLIVLDEPTNYLDRDSLGALSKALKAFEGGIVIITHSAEFT 961
Query: 69 NNICTDI 75
++ ++
Sbjct: 962 KDLTEEV 968
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 226
G K+LL K F L R L GPNG GKST + +
Sbjct: 444 GAKILLNKTQFRLKRNRRYGLCGPNGAGKSTLMRAI 479
>sp|P0A9U3|YBIT_ECOLI Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli (strain K12) GN=ybiT PE=3 SV=1
Length = 530
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 128/230 (55%), Gaps = 8/230 (3%)
Query: 8 EFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSF 67
E + GW++RV LA+ALF +P +LLLDEPTN+LD++ + WL+ L T++++SHD+ F
Sbjct: 155 EVAPGWKLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHF 214
Query: 68 LNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEK 127
LN +CT + LD +L Y GN+ + Q R+ L + ++ QI E++S
Sbjct: 215 LNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQS------F 268
Query: 128 AERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTF 187
R ++ + QA R ++ D + +E+ R+ RF L L + +T
Sbjct: 269 VSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPF-IRFEQDKKLFRNALEVEGLTK 327
Query: 188 GYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
G+ G L + +N L++ ++A++G NG+GKST L L G+L P+ G V
Sbjct: 328 GFDNGP-LFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTV 376
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 57/87 (65%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
K K SGG + R+ + + +P +L++DEPTNHLD+ ++ L+ L+ ++ TL+ VSH
Sbjct: 434 KPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSH 493
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNF 90
D+ F++++ T I+ + +++ + GN+
Sbjct: 494 DREFVSSLATRILEITPERVIDFSGNY 520
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 236 KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKF--DQ 293
K L E ++ +R L+G NG GKSTF+ +L G+L P G + P RIGK DQ
Sbjct: 14 KPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQ 73
Query: 294 HSGEHLFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAH 334
+ E DT +L+ + E+ R ++ LP +
Sbjct: 74 FAFEEFTVLDTVIMGHKELWEVKQERDR----IYALPEMSE 110
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVNFGLDMES 250
G K L E ++ +R L+G NG GKSTF+ +L G+L P G N LD
Sbjct: 12 GSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLG-------NVSLDPNE 64
Query: 251 RVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFP-DDTPCEY- 308
R+ + + F L + + K R RI + S E + D +Y
Sbjct: 65 RIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLEVKYG 124
Query: 309 LMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAE 353
M ++ LG+ G+P H P+ +++ G K RV LA+
Sbjct: 125 EMDGYSAEARAGELLLGV-GIPVEQHYGPMSEVAPGWKLRVLLAQ 168
>sp|P0A9U4|YBIT_ECOL6 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ybiT PE=3 SV=1
Length = 530
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 128/230 (55%), Gaps = 8/230 (3%)
Query: 8 EFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSF 67
E + GW++RV LA+ALF +P +LLLDEPTN+LD++ + WL+ L T++++SHD+ F
Sbjct: 155 EVAPGWKLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHF 214
Query: 68 LNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEK 127
LN +CT + LD +L Y GN+ + Q R+ L + ++ QI E++S
Sbjct: 215 LNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQS------F 268
Query: 128 AERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTF 187
R ++ + QA R ++ D + +E+ R+ RF L L + +T
Sbjct: 269 VSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPF-IRFEQDKKLFRNALEVEGLTK 327
Query: 188 GYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
G+ G L + +N L++ ++A++G NG+GKST L L G+L P+ G V
Sbjct: 328 GFDNGP-LFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTV 376
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 57/87 (65%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
K K SGG + R+ + + +P +L++DEPTNHLD+ ++ L+ L+ ++ TL+ VSH
Sbjct: 434 KPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSH 493
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNF 90
D+ F++++ T I+ + +++ + GN+
Sbjct: 494 DREFVSSLATRILEITPERVIDFSGNY 520
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 236 KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKF--DQ 293
K L E ++ +R L+G NG GKSTF+ +L G+L P G + P RIGK DQ
Sbjct: 14 KPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQ 73
Query: 294 HSGEHLFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAH 334
+ E DT +L+ + E+ R ++ LP +
Sbjct: 74 FAFEEFTVLDTVIMGHKELWEVKQERDR----IYALPEMSE 110
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVNFGLDMES 250
G K L E ++ +R L+G NG GKSTF+ +L G+L P G N LD
Sbjct: 12 GSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLG-------NVSLDPNE 64
Query: 251 RVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFP-DDTPCEY- 308
R+ + + F L + + K R RI + S E + D +Y
Sbjct: 65 RIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLEVKYG 124
Query: 309 LMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAE 353
M ++ LG+ G+P H P+ +++ G K RV LA+
Sbjct: 125 EMDGYSAEARAGELLLGV-GIPVEQHYGPMSEVAPGWKLRVLLAQ 168
>sp|P0A9U5|YBIT_ECO57 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O157:H7 GN=ybiT PE=3 SV=1
Length = 530
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 128/230 (55%), Gaps = 8/230 (3%)
Query: 8 EFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSF 67
E + GW++RV LA+ALF +P +LLLDEPTN+LD++ + WL+ L T++++SHD+ F
Sbjct: 155 EVAPGWKLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHF 214
Query: 68 LNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEK 127
LN +CT + LD +L Y GN+ + Q R+ L + ++ QI E++S
Sbjct: 215 LNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQS------F 268
Query: 128 AERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTF 187
R ++ + QA R ++ D + +E+ R+ RF L L + +T
Sbjct: 269 VSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPF-IRFEQDKKLFRNALEVEGLTK 327
Query: 188 GYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
G+ G L + +N L++ ++A++G NG+GKST L L G+L P+ G V
Sbjct: 328 GFDNGP-LFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTV 376
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 57/87 (65%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
K K SGG + R+ + + +P +L++DEPTNHLD+ ++ L+ L+ ++ TL+ VSH
Sbjct: 434 KPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSH 493
Query: 64 DQSFLNNICTDIIHLDMKKLFYYKGNF 90
D+ F++++ T I+ + +++ + GN+
Sbjct: 494 DREFVSSLATRILEITPERVIDFSGNY 520
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 236 KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKF--DQ 293
K L E ++ +R L+G NG GKSTF+ +L G+L P G + P RIGK DQ
Sbjct: 14 KPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQ 73
Query: 294 HSGEHLFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAH 334
+ E DT +L+ + E+ R ++ LP +
Sbjct: 74 FAFEEFTVLDTVIMGHKELWEVKQERDR----IYALPEMSE 110
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVNFGLDMES 250
G K L E ++ +R L+G NG GKSTF+ +L G+L P G N LD
Sbjct: 12 GSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLG-------NVSLDPNE 64
Query: 251 RVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFP-DDTPCEY- 308
R+ + + F L + + K R RI + S E + D +Y
Sbjct: 65 RIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLEVKYG 124
Query: 309 LMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAE 353
M ++ LG+ G+P H P+ +++ G K RV LA+
Sbjct: 125 EMDGYSAEARAGELLLGV-GIPVEQHYGPMSEVAPGWKLRVLLAQ 168
>sp|Q57242|UUP1_HAEIN ABC transporter ATP-binding protein uup-1 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=uup-A
PE=3 SV=1
Length = 647
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 125/232 (53%), Gaps = 15/232 (6%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGGW + +LARAL +P +LLLDEPTNHLD+ A+ WL+N+L ++ +++ +SHD+SF+
Sbjct: 157 LSGGWLRKAALARALVCDPDVLLLDEPTNHLDVEAIEWLENFLLDFQGSIVFISHDRSFI 216
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMK---SQGMSK 125
+ T I+ LD +L Y GN+ L+ + + + EL +K++ + + QG+
Sbjct: 217 RKMATRIVDLDRGQLVSYPGNYDLYLTTKEENLRVEALQNELFDKRLAQEEVWIRQGIKA 276
Query: 126 EKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDV 185
+ + +ALK +R Q+ D K + V + DV
Sbjct: 277 RRTRNEGRVRALKVMREERRQRRD-----------VMGTAKLQLDTSSRSGKIVFEMEDV 325
Query: 186 TFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
++ GK LL+ + + ++ALVGPNG GK+TF+ LL GE+ P GK+
Sbjct: 326 SYEI-AGKTLLKDFSTTILRGDKIALVGPNGCGKTTFIKLLLGEIQPTSGKI 376
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 6 TKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQ 65
K SGG R R+ LA+ L LL+LDEPTN LD+ + L+ L ++ TLL+VSHD+
Sbjct: 438 VKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDVETLELLEEILTDYQGTLLIVSHDR 497
Query: 66 SFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQ--EKQIREMKSQGM 123
F++N T+ LF KG+ + + +++ + + E+Q + KS+ +
Sbjct: 498 QFIDNTATECY------LFEGKGHLNKYVGGFFDAKQQQANFWASKAVEEQAKAKKSEPL 551
Query: 124 SKEKA 128
+E A
Sbjct: 552 KEESA 556
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 195 LLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEK 241
LL+ ++ V LVG NG GKST L ++ G++ + GK+ EK
Sbjct: 18 LLDHAELHIEPNECVCLVGRNGAGKSTLLKIIAGDVLMDDGKIQYEK 64
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 238 LLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQ 293
LL+ ++ V LVG NG GKST L ++ G++ + G+++ L + + +Q
Sbjct: 18 LLDHAELHIEPNECVCLVGRNGAGKSTLLKIIAGDVLMDDGKIQYEKDLVVSRLEQ 73
>sp|P16521|EF3A_YEAST Elongation factor 3A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YEF3 PE=1 SV=4
Length = 1044
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 113/236 (47%), Gaps = 61/236 (25%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGGW+++++LARA+ +LLLDEPTNHLD V WL NYL T T + +SHD FL
Sbjct: 544 LSGGWKMKLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFL 603
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
+N+C II+ + KL YKGNFT F K+ K YE
Sbjct: 604 DNVCEYIINYEGLKLRKYKGNFTEF-----VKKCPAAKAYE------------------- 639
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLP------PPVLGL 182
EL E+ +FP P YL ++ +
Sbjct: 640 --------------------------ELSNTDLEF----KFPEPGYLEGVKTKQKAIVKV 669
Query: 183 HDVTFGYPG-GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
++ F YPG K + +NF + SR+A++GPNG GKST +N+L GEL P G+V
Sbjct: 670 TNMEFQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEV 725
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 42/67 (62%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG ++++ LA + P L++LDEPTN+LD +++ L L+ ++ +++++H F
Sbjct: 897 LSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFT 956
Query: 69 NNICTDI 75
N+ ++
Sbjct: 957 KNLTEEV 963
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLN-LLKGELT--PNKGELRKSPRLRIGKF 291
K+LL K L R + GPNG GKST + + G++ P + E R +
Sbjct: 442 AKILLNKTQLRLKRARRYGICGPNGCGKSTLMRAIANGQVDGFPTQEECRTV-------Y 494
Query: 292 DQHSGEHLFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVAL 351
+H + D + +++ + E + +L FG +PI LSGG K ++AL
Sbjct: 495 VEHDIDGTHSDTSVLDFVFESGVGTKEAIKDKLIEFGFTDEMIAMPISALSGGWKMKLAL 554
Query: 352 AELTL 356
A L
Sbjct: 555 ARAVL 559
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 226
G K+LL K L R + GPNG GKST + +
Sbjct: 441 GAKILLNKTQLRLKRARRYGICGPNGCGKSTLMRAI 476
>sp|Q9FIB4|AB2F_ARATH ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2
PE=3 SV=2
Length = 678
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 137/235 (58%), Gaps = 15/235 (6%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
FS GW++R+SL + L P LLLLDEPTNHLDL+ + WL+ YL ++++SHD++FL
Sbjct: 246 FSSGWQMRMSLGKILLQNPDLLLLDEPTNHLDLDTIEWLEGYLIKQDVPMVIISHDRAFL 305
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTK-EYELQEKQIREMKSQG--MSK 125
+ +CT I+ +M + GN++ YV + EL + +Y EKQ +E+++ +S+
Sbjct: 306 DQLCTKIVETEMGVSRTFDGNYS----QYVISKAELVEAQYAAWEKQQKEIEATKDLISR 361
Query: 126 EKAERQHSHKALKEQARKRVQKDDDDEPKELLEKP-REYIVKFRFPNPPYLPPPVLGLHD 184
A + E+ +++Q++ EL+EKP + +K RFP V+ + +
Sbjct: 362 LSAGANSGRASSAEKKLEKLQEE------ELIEKPFQRKQMKIRFPECGLSGRSVVTVKN 415
Query: 185 VTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
+ FG+ K+L K N ++ +VA++GPNG GKST L L+ G P +G+V+L
Sbjct: 416 LVFGFD-DKMLFNKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPMRGEVIL 469
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
M ++ SGG + R++ + + TLL+LDEPTNHLD+ + L+ + +K T++
Sbjct: 522 MLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYKGTVIT 581
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLF 93
VSHD+ F+ I +I + L Y G++ F
Sbjct: 582 VSHDRYFIKQIVNRVIEVRDGGLMDYAGDYNYF 614
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 150 DDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTFGYPGGKVLLEKVNFGLDMESRV 209
+ E + LL R+ I K + V L +++ Y G VL + V + + +V
Sbjct: 55 NSELESLLSTDRKLISKQSNNGASSISSGV-RLENISKSYEGITVL-KDVTWEVKKGEKV 112
Query: 210 ALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 269
L+G NG GK+T L ++ G+ P+ G V+ K N + S+ V K F+
Sbjct: 113 GLIGVNGAGKTTQLRIITGQEEPDSGNVIWAKPNLKVAFLSQEFEVSMGKTVKEEFMCTF 172
Query: 270 KGEL 273
K E+
Sbjct: 173 KEEM 176
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 234 KGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGE-LRKSPRLRIGKFD 292
+G +L+ V + + +V L+G NG GK+T L ++ G+ P+ G + P L++
Sbjct: 94 EGITVLKDVTWEVKKGEKVGLIGVNGAGKTTQLRIITGQEEPDSGNVIWAKPNLKVAFLS 153
Query: 293 QH 294
Q
Sbjct: 154 QE 155
>sp|Q9LV93|AB5F_ARATH ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5
PE=2 SV=1
Length = 692
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 136/232 (58%), Gaps = 9/232 (3%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
FSGGW++R+SL + L +P LLLLDEPTNHLDL+ + WL+ YLQ ++++SHD++FL
Sbjct: 260 FSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLQKQDVPMVIISHDRAFL 319
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
+ +CT I+ +M ++GN++ + + + +E Q+K I K +++ A
Sbjct: 320 DQLCTKIVETEMGVSRTFEGNYSQYVISKAEWIETQNAAWEKQQKDIDSTKDL-IARLGA 378
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKP-REYIVKFRFPNPPYLPPPVLGLHDVTF 187
+ E+ +++Q+ +EL+EKP + +K RFP V+ + ++ F
Sbjct: 379 GANSGRASTAEKKLEKLQE------QELIEKPFQRKQMKIRFPERGTSGRSVVNVKNIDF 432
Query: 188 GYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
G+ K+L +K N ++ ++A++GPNG GKST L L+ G P KG+V+L
Sbjct: 433 GFE-DKMLFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVIL 483
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG + R++ + + TLL+LDEPTNHLD+ + L+ + ++ T++ VSHD+ F+
Sbjct: 544 LSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVIAVSHDRYFI 603
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLF 93
I +I ++ L Y G++ +
Sbjct: 604 KQIVNRVIEVEDGCLEDYAGDYNYY 628
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 182 LHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEK 241
L ++ Y G VL + V + + +V LVG NG GK+T L ++ G+ P+ G V+ K
Sbjct: 100 LENIRKSYKGVTVL-KDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAK 158
Query: 242 VNFGLDMESRVALVGPNGIGKSTFLNLLKGEL 273
N + S+ V + + F+ K E+
Sbjct: 159 PNMKVAFLSQEFEVSMSKTVREEFMTAFKEEM 190
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 213 GPNGIGKSTFLNLLKGELTPNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGE 272
G +GI L ++ KG +L+ V + + +V LVG NG GK+T L ++ G+
Sbjct: 90 GASGISSGVKLENIRKSY---KGVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQ 146
Query: 273 LTPNKGELRKS-PRLRIGKFDQH 294
P+ G + K+ P +++ Q
Sbjct: 147 EEPDSGNVIKAKPNMKVAFLSQE 169
>sp|P43672|UUP_ECOLI ABC transporter ATP-binding protein uup OS=Escherichia coli (strain
K12) GN=uup PE=1 SV=2
Length = 635
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 160/354 (45%), Gaps = 60/354 (16%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGGW + +L RAL P +LLLDEPTNHLD+ + WL+ +L+T+ T++ +SHD+SF+
Sbjct: 157 LSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFI 216
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
N+ T I+ LD KL Y GN+ Y+ +++E + ELQ + + +++E+
Sbjct: 217 RNMATRIVDLDRGKLVTYPGNY----DQYLLEKEEALRVEELQNAEF----DRKLAQEEV 268
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTFG 188
+ KA + + RV+ + + K + V + DV +
Sbjct: 269 WIRQGIKARRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQ 328
Query: 189 YPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKVNFGLDM 248
GK L++ + + ++AL+GPNG GK+T L L+ G+L + G++ +
Sbjct: 329 V-NGKQLVKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHV--------- 378
Query: 249 ESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFPDDTPCEY 308
+L + FDQH E L PD T +
Sbjct: 379 ----------------------------------GTKLEVAYFDQHRAE-LDPDKTVMDN 403
Query: 309 LM--KLFNLPYEKSRRQLGMFG----LPSYAHTIPIRDLSGGQKARVALAELTL 356
L K + K R LG P A T P+R LSGG++ R+ LA L L
Sbjct: 404 LAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMT-PVRALSGGERNRLLLARLFL 456
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 6 TKEFSGGWRIRVSLARALFLEPT-LLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHD 64
+ SGG R R+ LAR LFL+P+ LL+LDEPTN LD+ + L+ + +++ T+L+VSHD
Sbjct: 438 VRALSGGERNRLLLAR-LFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHD 496
Query: 65 QSFLNNICTDI 75
+ F++N T+
Sbjct: 497 RQFVDNTVTEC 507
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 195 LLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEK 241
LL+ ++ RV LVG NG GKST + +L E + G+++ E+
Sbjct: 18 LLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQ 64
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 238 LLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQ 293
LL+ ++ RV LVG NG GKST + +L E + G + L + + Q
Sbjct: 18 LLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQDLIVARLQQ 73
>sp|O94489|EF3_SCHPO Elongation factor 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=tef3 PE=1 SV=1
Length = 1047
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 115/237 (48%), Gaps = 62/237 (26%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKK-TLLVVSHDQSF 67
SGGW+++++L RA+F P +LLLDEPTNHLD+ V WL+N+L K + ++VSHD F
Sbjct: 549 LSGGWKMKLALTRAMFKNPDILLLDEPTNHLDVVNVAWLENFLVNQKDVSSIIVSHDSGF 608
Query: 68 LNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEK 127
L+++ IIH + KL Y GN + F V+K YEL ++
Sbjct: 609 LDHVVQAIIHYERFKLRKYLGNMSEF----VKKVPSAKSYYELGASEM------------ 652
Query: 128 AERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPP------PVLG 181
+F+FP P +L ++
Sbjct: 653 --------------------------------------EFKFPEPGFLEGVKTKQRAIIK 674
Query: 182 LHDVTFGYPG-GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
+ ++F YPG K L ++F + + SR+A++GPNG GKST + +L GEL P G++
Sbjct: 675 VQHMSFQYPGTSKPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGELLPTVGEI 731
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 232 PNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKF 291
P K L ++F + + SR+A++GPNG GKST + +L GEL P GE+ + RI
Sbjct: 683 PGTSKPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGELLPTVGEIYQHENCRIAYV 742
Query: 292 DQHSGEHL--FPDDTPCEYLMKLF 313
Q + HL PD TP EY+ F
Sbjct: 743 AQAAFTHLGHHPDKTPSEYIQWRF 766
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%)
Query: 7 KEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQS 66
K SGG ++++ LA +L P +++LDEPTN+LD +++ L L+ + +++V+H +
Sbjct: 902 KGLSGGQKVKLVLAACTWLRPHVIVLDEPTNYLDRDSLGALSKGLKNFGGGVVLVTHSRE 961
Query: 67 FLNNICTDI 75
F + ++
Sbjct: 962 FTEGLTEEV 970
Score = 35.4 bits (80), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 9/120 (7%)
Query: 235 GKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQH 294
K+LL + L R L GPNG GKST + + G++ P + +H
Sbjct: 446 AKILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAIVN------GQVEGFPTHLRTVYVEH 499
Query: 295 SGEHLFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAH---TIPIRDLSGGQKARVAL 351
+ D +++++ +P + + S+ +PI LSGG K ++AL
Sbjct: 500 DIDESEADTPSVDFILQDPAVPIKDRDEIVKALKENSFTDELINMPIGSLSGGWKMKLAL 559
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 191 GGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLL 226
G K+LL + L R L GPNG GKST + +
Sbjct: 445 GAKILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAI 480
>sp|P39115|EXPZ_BACSU Nucleotide-binding protein ExpZ OS=Bacillus subtilis (strain 168)
GN=expZ PE=3 SV=2
Length = 547
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 136/255 (53%), Gaps = 18/255 (7%)
Query: 8 EFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSF 67
+ SGG +++ LA+ L + LLLLDEPTNHLD ++ +L L+ + T+++VSHD+ F
Sbjct: 103 QLSGGEKLKARLAKGLSEDADLLLLDEPTNHLDEKSLQFLIQQLKHYNGTVILVSHDRYF 162
Query: 68 LNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQ--GMS- 124
L+ T I L+ + L +KGN++ + K +KR +EYE Q+K + +++Q G++
Sbjct: 163 LDEAATKIWSLEDQTLIEFKGNYSGYMKFREKKRLTQQREYEKQQKMVERIEAQMNGLAS 222
Query: 125 -KEKAERQHSHK-ALKEQARKRVQKDD---DDEPKEL---LEKPR------EYIVKFRFP 170
EKA Q + K KE R + ++ D + K L LEK + EY V+F
Sbjct: 223 WSEKAHAQSTKKEGFKEYHRVKAKRTDAQIKSKQKRLEKELEKAKAEPVTPEYTVRFSID 282
Query: 171 NPPYLPPPVLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGEL 230
L + +VT + G + L + NF + +VA++GPNG GK+T LN++ G+
Sbjct: 283 TTHKTGKRFLEVQNVTKAF-GERTLFKNANFTIQHGEKVAIIGPNGSGKTTLLNIILGQE 341
Query: 231 TPNKGKVLLEKVNFG 245
T + N G
Sbjct: 342 TAEGSVWVSPSANIG 356
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 7 KEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQS 66
K S G R+++ L + E +L+LDEPTNHLDL + L+ L + TLL VSHD+
Sbjct: 405 KHMSMGERVKIKLMAYILEEKDVLILDEPTNHLDLPSREQLEETLSQYSGTLLAVSHDRY 464
Query: 67 FL 68
FL
Sbjct: 465 FL 466
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 26/123 (21%)
Query: 234 KGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGE-LRKSPRLRIGKFD 292
K + + + VN + + ++G NG GKST L+L+ +L P +G+ LRK +L + +
Sbjct: 15 KDQTVFKHVNASVQQGDIIGIIGKNGAGKSTLLHLIHNDLAPAQGQILRKDIKLAL--VE 72
Query: 293 QHSGEHLFPDDTPCEYLMKLFNLPYEKSRRQLGMFGLPSYAHTIPIRD---LSGGQKARV 349
Q + + F D TP E KL + +P+RD LSGG+K +
Sbjct: 73 QETAAYSFADQTPAE--KKLLEKWH------------------VPLRDFHQLSGGEKLKA 112
Query: 350 ALA 352
LA
Sbjct: 113 RLA 115
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVL 238
++ L +V++ + + + VN + + ++G NG GKST L+L+ +L P +G++L
Sbjct: 4 IVTLTNVSYEVKD-QTVFKHVNASVQQGDIIGIIGKNGAGKSTLLHLIHNDLAPAQGQIL 62
Query: 239 LEKVNFGL 246
+ + L
Sbjct: 63 RKDIKLAL 70
>sp|O34512|YFMM_BACSU Uncharacterized ABC transporter ATP-binding protein YfmM
OS=Bacillus subtilis (strain 168) GN=yfmM PE=3 SV=2
Length = 518
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 168/353 (47%), Gaps = 56/353 (15%)
Query: 3 EKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVS 62
E+ + SGG R +V LA+ L +P +LLLDEPTN+LD + WL YLQ ++ +++S
Sbjct: 157 ERDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILIS 216
Query: 63 HDQSFLNNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQG 122
HD FLN++ I H++ ++L Y G++ F ++Y K+++L Y+ Q++++ E+K
Sbjct: 217 HDIPFLNSVINLIYHVENQELTRYVGDYHQFMEVYEVKKQQLEAAYKKQQQEVAELKD-F 275
Query: 123 MSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGL 182
+++ KA + A+ Q K++ K D ++E E P P + P
Sbjct: 276 VARNKARVSTRNMAMSRQ--KKLDKMD------MIELAAEK------PKPEFHFKP---- 317
Query: 183 HDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLLEKV 242
GK++ E + L+ G +P L +
Sbjct: 318 -----ARTSGKLIFETKD------------------------LVIGYDSP-----LSRPL 343
Query: 243 NFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGEHLFPD 302
N ++ ++AL G NGIGK+T L L GE+ P +G + + + G F+Q E +
Sbjct: 344 NLRMERGQKIALYGANGIGKTTLLKSLLGEIQPLEGSVERGEHIYTGYFEQEVKET--NN 401
Query: 303 DTPCEYLMKLF-NLPYEKSRRQLGMFGLPSYAHTIPIRDLSGGQKARVALAEL 354
+T E + F + + R L GL + + LSGG+KA+V L +L
Sbjct: 402 NTCIEEVWSEFPSYTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKL 454
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 236 KVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHS 295
+ + V+F L V L+G NG GKSTF+N++ G+L P++G++ S +R+G DQH+
Sbjct: 16 RAIFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSKNVRVGYLDQHT 75
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 22/189 (11%)
Query: 178 PVLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
+L + D++ G+ G + + V+F L V L+G NG GKSTF+N++ G+L P++GKV
Sbjct: 2 SILSVKDLSHGF-GDRAIFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKV 60
Query: 238 LLEK-VNFGLDMESRVALVGPN--GIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQH 294
K V G + V G + + K F L E N+ ++G+ D
Sbjct: 61 EWSKNVRVGYLDQHTVLEKGKSIRDVLKDAFHYLFAMEEEMNE------IYNKMGEADPD 114
Query: 295 SGEHLFPD-----DTPCEYLMKLFNLPYEKSRRQLGM--FGLPSYAHTIPIRDLSGGQKA 347
E L + D + + E+ R LG+ GL + DLSGGQ+
Sbjct: 115 ELEKLLEEVGVIQDALTNNDFYVIDSKVEEIARGLGLSDIGLER-----DVTDLSGGQRT 169
Query: 348 RVALAELTL 356
+V LA+L L
Sbjct: 170 KVLLAKLLL 178
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 3 EKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVS 62
E SGG + +V L + + E LL+LDEPTNHLD +A L L+ +K ++L++S
Sbjct: 435 ESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDADAKEELKRALKEYKGSILLIS 494
Query: 63 HDQSFLNNICTD 74
H+ F +I T+
Sbjct: 495 HEPDFYMDIATE 506
>sp|O31716|YKPA_BACSU Uncharacterized ABC transporter ATP-binding protein YkpA
OS=Bacillus subtilis (strain 168) GN=ykpA PE=3 SV=1
Length = 540
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 130/244 (53%), Gaps = 26/244 (10%)
Query: 1 MQEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLV 60
+ K + G +++V LA+ALF +P +LLLDEPTNHLDL A+ WL+ +L ++ T++V
Sbjct: 148 LHTKKMADLGGSEKVKVLLAQALFGKPDVLLLDEPTNHLDLQAIQWLEEFLINFENTVIV 207
Query: 61 VSHDQSFLNNICTDIIHLDMKKLFYYKGNFTLF---KKMYVQKRKELTKEYELQEKQIRE 117
VSHD+ FLN +CT I LD K+ Y GN+ + ++ ++ +E K+ E Q KQ++E
Sbjct: 208 VSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFWYESSQLALKLSQEANKKKEEQIKQLQE 267
Query: 118 MKSQ-GMSKEKAERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLP 176
++ + K+++ S K L E+ DD +P R+P + P
Sbjct: 268 FVARFSANASKSKQATSRKKLLEKITL-----DDIKPSSR-----------RYPYVNFTP 311
Query: 177 P-----PVLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELT 231
VL + +T G KV L+ V+F ++ E ++A G N + +T ++ GE+
Sbjct: 312 EREIGNDVLRVEGLTKTIDGVKV-LDNVSFIMNREDKIAFTGRNELAVTTLFKIISGEME 370
Query: 232 PNKG 235
+ G
Sbjct: 371 ADSG 374
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 4 KSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSH 63
K SGG ++R L++A+ +L+LDEPTNHLDL ++ L+N L ++K +L SH
Sbjct: 435 KKANVLSGGEKVRCMLSKAMLSGANILILDEPTNHLDLESITALNNGLISFKGAMLFTSH 494
Query: 64 DQSFLNNICTDIIHL 78
D F+ I II +
Sbjct: 495 DHQFVQTIANRIIEI 509
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 238 LLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLRIGKFDQHSGE 297
L E VN + L+G NG GKSTFL +L GE+ P G++ SP R+ Q+ E
Sbjct: 16 LFEDVNIKFTPGNCYGLIGANGAGKSTFLKVLSGEIEPQTGDVHMSPGERLAVLKQNHFE 75
Query: 298 H 298
+
Sbjct: 76 Y 76
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 179 VLGLHDVTFGYPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKV 237
++ +++V+ + K L E VN + L+G NG GKSTFL +L GE+ P G V
Sbjct: 1 MIAVNNVSLRFADRK-LFEDVNIKFTPGNCYGLIGANGAGKSTFLKVLSGEIEPQTGDV 58
>sp|P45127|Y1252_HAEIN Uncharacterized ABC transporter ATP-binding protein HI_1252
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=HI_1252 PE=1 SV=1
Length = 556
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 127/231 (54%), Gaps = 11/231 (4%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG R RV+L R L +P +LLLDEPTNHLD +V WL+ +L ++ T++ ++HD+ FL
Sbjct: 164 LSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITHDRYFL 223
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
+N+ I+ LD + ++GN++ + + QK K L QE+ + + ++KE
Sbjct: 224 DNVAGWILELDRGEGIPWEGNYSSWLE---QKEKRLE-----QEQATENARQKSIAKELE 275
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTFG 188
+ + K + +++ R+ + D+ E + R + P P L V+ + ++T
Sbjct: 276 WVRQNPKGRQAKSKARMARFDELNSGEY--QKRNETNELFIPPGPRLGDKVIEVQNLTKS 333
Query: 189 YPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
Y G + L++ ++F + + V ++G NG GKST +L G+ P+ G V +
Sbjct: 334 Y-GDRTLIDDLSFSIPKGAIVGIIGANGAGKSTLFRMLSGQEQPDSGSVTM 383
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q+K E SGG R R+ LA+ L +LLLDEPTN LD+ + L+N + + +V+
Sbjct: 439 QQKRVGELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDVETLRALENAILEFPGCAMVI 498
Query: 62 SHDQSFLNNICTDII-HLDMKKLFYYKGNFTLFKK 95
SHD+ FL+ I T I+ + D K+ +Y+GNF+ +++
Sbjct: 499 SHDRWFLDRIATHILDYGDEGKVTFYEGNFSDYEE 533
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 228 GELTPNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLR 287
G++ P K + +L+ ++ +++ ++G NG GKST L ++ G +GE R P ++
Sbjct: 13 GKVVPPK-RHILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPQPGIK 71
Query: 288 IGKFDQ 293
IG Q
Sbjct: 72 IGYLPQ 77
>sp|P0A9W5|YJJK_SHIFL Uncharacterized ABC transporter ATP-binding protein YjjK
OS=Shigella flexneri GN=yjjK PE=3 SV=2
Length = 555
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 124/231 (53%), Gaps = 11/231 (4%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG R RV+L R L +P +LLLDEPTNHLD +V WL+ +L ++ T++ ++HD+ FL
Sbjct: 163 LSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFL 222
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
+N+ I+ LD + ++GN++ + + QK + L QE + + + KE
Sbjct: 223 DNVAGWILELDRGEGIPWEGNYSSWLE---QKDQRLA-----QEASQEAARRKSIEKELE 274
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTFG 188
+ K + + + R+ + ++ E + R + P P L VL + ++
Sbjct: 275 WVRQGTKGRQSKGKARLARFEELNSTEY--QKRNETNELFIPPGPRLGDKVLEVSNLRKS 332
Query: 189 YPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
Y G ++L++ ++F + + V ++GPNG GKST ++ G+ P+ G + L
Sbjct: 333 Y-GDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITL 382
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q K E SGG R R+ LA+ L + +LLLDEPTN LD+ + L+N L + +V+
Sbjct: 438 QGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVI 497
Query: 62 SHDQSFLNNICTDII-HLDMKKLFYYKGNFTLFKK 95
SHD+ FL+ I T I+ + D K+ +++GNFT +++
Sbjct: 498 SHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEE 532
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 228 GELTPNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLR 287
G++ P K + +L+ ++ +++ ++G NG GKST L ++ G +GE R P ++
Sbjct: 12 GKVVPPK-RHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIK 70
Query: 288 IGKFDQHSGEHLFPDDTPCEYL 309
IG Q L P+ T E +
Sbjct: 71 IGYLPQEP--QLNPEHTVRESI 90
>sp|P0A9W3|YJJK_ECOLI Uncharacterized ABC transporter ATP-binding protein YjjK
OS=Escherichia coli (strain K12) GN=yjjK PE=1 SV=2
Length = 555
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 124/231 (53%), Gaps = 11/231 (4%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG R RV+L R L +P +LLLDEPTNHLD +V WL+ +L ++ T++ ++HD+ FL
Sbjct: 163 LSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFL 222
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
+N+ I+ LD + ++GN++ + + QK + L QE + + + KE
Sbjct: 223 DNVAGWILELDRGEGIPWEGNYSSWLE---QKDQRLA-----QEASQEAARRKSIEKELE 274
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTFG 188
+ K + + + R+ + ++ E + R + P P L VL + ++
Sbjct: 275 WVRQGTKGRQSKGKARLARFEELNSTEY--QKRNETNELFIPPGPRLGDKVLEVSNLRKS 332
Query: 189 YPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
Y G ++L++ ++F + + V ++GPNG GKST ++ G+ P+ G + L
Sbjct: 333 Y-GDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITL 382
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q K E SGG R R+ LA+ L + +LLLDEPTN LD+ + L+N L + +V+
Sbjct: 438 QGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVI 497
Query: 62 SHDQSFLNNICTDII-HLDMKKLFYYKGNFTLFKK 95
SHD+ FL+ I T I+ + D K+ +++GNFT +++
Sbjct: 498 SHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEE 532
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 228 GELTPNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLR 287
G++ P K + +L+ ++ +++ ++G NG GKST L ++ G +GE R P ++
Sbjct: 12 GKVVPPK-RHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIK 70
Query: 288 IGKFDQHSGEHLFPDDTPCEYL 309
IG Q L P+ T E +
Sbjct: 71 IGYLPQEP--QLNPEHTVRESI 90
>sp|P0A9W4|YJJK_ECO57 Uncharacterized ABC transporter ATP-binding protein YjjK
OS=Escherichia coli O157:H7 GN=yjjK PE=3 SV=2
Length = 555
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 124/231 (53%), Gaps = 11/231 (4%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG R RV+L R L +P +LLLDEPTNHLD +V WL+ +L ++ T++ ++HD+ FL
Sbjct: 163 LSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFL 222
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
+N+ I+ LD + ++GN++ + + QK + L QE + + + KE
Sbjct: 223 DNVAGWILELDRGEGIPWEGNYSSWLE---QKDQRLA-----QEASQEAARRKSIEKELE 274
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTFG 188
+ K + + + R+ + ++ E + R + P P L VL + ++
Sbjct: 275 WVRQGTKGRQSKGKARLARFEELNSTEY--QKRNETNELFIPPGPRLGDKVLEVSNLRKS 332
Query: 189 YPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL 239
Y G ++L++ ++F + + V ++GPNG GKST ++ G+ P+ G + L
Sbjct: 333 Y-GDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITL 382
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 2 QEKSTKEFSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVV 61
Q K E SGG R R+ LA+ L + +LLLDEPTN LD+ + L+N L + +V+
Sbjct: 438 QGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVI 497
Query: 62 SHDQSFLNNICTDII-HLDMKKLFYYKGNFTLFKK 95
SHD+ FL+ I T I+ + D K+ +++GNFT +++
Sbjct: 498 SHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEE 532
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 228 GELTPNKGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGELRKSPRLR 287
G++ P K + +L+ ++ +++ ++G NG GKST L ++ G +GE R P ++
Sbjct: 12 GKVVPPK-RHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIK 70
Query: 288 IGKFDQHSGEHLFPDDTPCEYL 309
IG Q L P+ T E +
Sbjct: 71 IGYLPQEP--QLNPEHTVRESI 90
>sp|P12622|CHVD_RHIRD ATP-binding protein ChvD (Fragment) OS=Rhizobium radiobacter
GN=chvD PE=3 SV=1
Length = 286
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 130/238 (54%), Gaps = 12/238 (5%)
Query: 9 FSGGWRIRVSLARALFLEPTLLLLDEPTNHLDLNAVIWLDNYLQTWKKTLLVVSHDQSFL 68
SGG R RV+L + L +P LLLLDEPTNHLD + WL+ +L+ + +++++HD+ FL
Sbjct: 57 LSGGERRRVALCKLLLSQPDLLLLDEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRYFL 116
Query: 69 NNICTDIIHLDMKKLFYYKGNFTLFKKMYVQKRKELTKEYELQEKQIREMKSQGMSKEKA 128
+N+ I+ LD + Y+GN++ + + ++ ++ +E ++K I S+E+
Sbjct: 117 DNVTGWILELDRGRGIPYEGNYSAYLQAKAKRMQQEAREDASRQKAI--------SREQE 168
Query: 129 ERQHSHKALKEQARKRVQKDDDDEPKELLEKPREYIVKFRFPNPPYLPPPVLGLHDVTFG 188
S KA + +++ R+++ DE E E R + P L V+ ++T
Sbjct: 169 WIASSPKARQTKSKARIRR--YDELVEAAENRRPGDAQIVIPVAERLGRVVIEAENLTKS 226
Query: 189 YPGGKVLLEKVNFGLDMESRVALVGPNGIGKSTFLNLLKGELTPNKGKVLL-EKVNFG 245
Y G +VL+E + F L V ++GPNG GK+T ++ G+ P+ G V + E V+ G
Sbjct: 227 Y-GDRVLIENLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEQPDSGSVTVGETVHLG 283
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,027,004
Number of Sequences: 539616
Number of extensions: 6728001
Number of successful extensions: 59823
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3652
Number of HSP's successfully gapped in prelim test: 455
Number of HSP's that attempted gapping in prelim test: 43416
Number of HSP's gapped (non-prelim): 15043
length of query: 356
length of database: 191,569,459
effective HSP length: 118
effective length of query: 238
effective length of database: 127,894,771
effective search space: 30438955498
effective search space used: 30438955498
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)