BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2685
(992 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/479 (63%), Positives = 357/479 (74%), Gaps = 83/479 (17%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---- 176
NWQSR C+CVLTGHNHYVMCAQFHPT+D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 177 ------------------------------------------GADDRQIKLWRMNDSKAW 194
GADDRQ+K+WRMN+SKAW
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIV 254
EVD RGHYNNVSC +FHP+ E+I+SN+EDKSIR+WDM+KRT + TFRR+ +R
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDR------- 293
Query: 255 SNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
FWVL AHP LNLFAAGHD GM+VFK ERERPA
Sbjct: 294 ----------------------------FWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 315 YTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNAN 374
Y VH N+++YVK+RFL +LD +SKD VMQLR G + P ++SYN E+++L+ TR A+
Sbjct: 326 YAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTR-AS 384
Query: 375 NFENSTYDLYMIPKE-ESERKEVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKNE 432
N ENSTYDLY IPK+ +S+ + +GKRS+G++AVWVARNRFAVLDR H++LIKNLKNE
Sbjct: 385 NLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNE 443
Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 154/237 (64%), Gaps = 36/237 (15%)
Query: 772 HVILFDVQQKRALAQVKVAKCRHVLYNKGEEIFYAGTGALLCREADHVILFDVQQKRALA 831
H +L + +V+V C +EIFYAGTG LL R+AD + LFDVQQKR LA
Sbjct: 433 HSLLIKNLKNEITKKVQVPNC--------DEIFYAGTGNLLLRDADSITLFDVQQKRTLA 484
Query: 832 QVKVAKCRHVVWSPDMTHLALLSKHTLHICNRKMEG-----------------AGLMKSD 874
VK++K ++V+WS DM+H+ALL+KH + ICNRK++ +G+
Sbjct: 485 SVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYT 544
Query: 875 VINNIDSSLAATEVDVQGWGDDADL--------GNQVYYLDRECSPHVLRIDPTEFKFKL 926
N+I ++ + G DL GN VY LDREC P VL IDPTEFKFKL
Sbjct: 545 TSNHIKYAVTTGD---HGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKL 601
Query: 927 ALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
ALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGYPEVALHFVKD++TR +LALECGNI
Sbjct: 602 ALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNI 658
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 150/245 (61%), Gaps = 63/245 (25%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GYPEVALHFVKD++TR +LALECGNI+IALEAA+ L+DK+
Sbjct: 633 GYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKN-------------------- 672
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLLHYF 572
C++ KL + L+ GN +I E+ YQ
Sbjct: 673 CWE------KLGEVALLQGN-------HQIVEM------CYQRTK--------------- 698
Query: 573 SFFFFAFLRLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCG 632
F +L+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CG
Sbjct: 699 -----NFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCG 753
Query: 633 QTSLAYLTAATHGLSEEAAELESNLRTADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPL 691
Q SLAYLTAATHGL EEA L+ T DP T+P + P A+LL+PPAP+ +TNWPL
Sbjct: 754 QKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPL 810
Query: 692 LTVTK 696
LTV+K
Sbjct: 811 LTVSK 815
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Query: 753 G 753
Sbjct: 504 A 504
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/479 (63%), Positives = 357/479 (74%), Gaps = 83/479 (17%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---- 176
NWQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 177 ------------------------------------------GADDRQIKLWRMNDSKAW 194
GADDRQ+K+WRMN+SKAW
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIV 254
EVD RGHYNNVSC +FHP+ E+I+SN+EDKSIR+WDM+KRT + TFRR+ +R
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDR------- 293
Query: 255 SNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
FWVL AHP LNLFAAGHD GM+VFK ERERPA
Sbjct: 294 ----------------------------FWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 315 YTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNAN 374
Y VH N+++YVK+RFL +LD +SKD VMQLR G + P S+SYN E+++L+ TR A+
Sbjct: 326 YAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFSMSYNPAENAVLLCTR-AS 384
Query: 375 NFENSTYDLYMIPKE-ESERKEVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKNE 432
N ENSTYDLY IPK+ +++ + +GKRS+G++AVWVARNRFAVLDR H++LIKNLKNE
Sbjct: 385 NLENSTYDLYTIPKDADTQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNE 443
Score = 226 bits (575), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 154/237 (64%), Gaps = 36/237 (15%)
Query: 772 HVILFDVQQKRALAQVKVAKCRHVLYNKGEEIFYAGTGALLCREADHVILFDVQQKRALA 831
H +L + +V+V C +EIFYAGTG LL R+A+ + LFDVQQKR LA
Sbjct: 433 HSLLIKNLKNEITKKVQVPNC--------DEIFYAGTGNLLLRDAESITLFDVQQKRTLA 484
Query: 832 QVKVAKCRHVVWSPDMTHLALLSKHTLHICNRKMEG-----------------AGLMKSD 874
VK++K ++V+WS DM+H+ALL+KH + ICNRK+E +G+
Sbjct: 485 SVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYT 544
Query: 875 VINNIDSSLAATEVDVQGWGDDADL--------GNQVYYLDRECSPHVLRIDPTEFKFKL 926
N+I ++ + G DL GN VY LDREC P VL IDPTEFKFKL
Sbjct: 545 TSNHIKYAVTTGDY---GIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKL 601
Query: 927 ALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
ALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGYPEVALHFVKD++TR +LALECGNI
Sbjct: 602 ALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNI 658
Score = 189 bits (481), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 87/108 (80%), Positives = 100/108 (92%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GYPEVALHFVKD++TR +LALECGNI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEM
Sbjct: 633 GYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEM 692
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLG 560
CYQRTKNFDKL+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG
Sbjct: 693 CYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLG 740
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 102/143 (71%), Gaps = 7/143 (4%)
Query: 579 FLRLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAY 638
F +L+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CGQ SLAY
Sbjct: 700 FDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAY 759
Query: 639 LTAATHGLSEEAAELESNLRTADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKK 697
LTAATHGL EEA L+ T DP T+P + P A+LL+PPAP+ +TNWPLLTV+K
Sbjct: 760 LTAATHGLDEEAESLK---ETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKG 816
Query: 698 MSSVGCEEIFYAGTGALLCREAD 720
I G G L + D
Sbjct: 817 FFE---GSIASKGKGGALAADID 836
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Query: 753 G 753
Sbjct: 504 A 504
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/479 (63%), Positives = 357/479 (74%), Gaps = 83/479 (17%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---- 176
NWQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 177 ------------------------------------------GADDRQIKLWRMNDSKAW 194
GADDRQ+K+WRMN+SKAW
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIV 254
EVD RGHYNNVSC +FHP+ E+I+SN+EDKSIR+WDM+KRT + TFRR+ +R
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDR------- 293
Query: 255 SNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
FWVL AHP LNLFAAGHD GM+VFK ERERPA
Sbjct: 294 ----------------------------FWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 315 YTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNAN 374
Y VH N+++YVK+RFL +LD +SKD VMQLR G + P ++SYN E+++L+ TR A+
Sbjct: 326 YAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTR-AS 384
Query: 375 NFENSTYDLYMIPKE-ESERKEVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKNE 432
N ENSTYDLY IPK+ +S+ + +GKRS+G++AVWVARNRFAVLDR H++LIKNLKNE
Sbjct: 385 NLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNE 443
Score = 226 bits (576), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 154/237 (64%), Gaps = 36/237 (15%)
Query: 772 HVILFDVQQKRALAQVKVAKCRHVLYNKGEEIFYAGTGALLCREADHVILFDVQQKRALA 831
H +L + +++V C +EIFYAGTG LL R+AD + LFDVQQKR LA
Sbjct: 433 HSLLIKNLKNEITKKIQVPNC--------DEIFYAGTGNLLLRDADSITLFDVQQKRTLA 484
Query: 832 QVKVAKCRHVVWSPDMTHLALLSKHTLHICNRKMEG-----------------AGLMKSD 874
VK++K ++V+WS DM+H+ALL+KH + ICNRK++ +G+
Sbjct: 485 SVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYT 544
Query: 875 VINNIDSSLAATEVDVQGWGDDADL--------GNQVYYLDRECSPHVLRIDPTEFKFKL 926
N+I ++ + G DL GN VY LDREC P VL IDPTEFKFKL
Sbjct: 545 TSNHIKYAVTTGD---HGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKL 601
Query: 927 ALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
ALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGYPEVALHFVKD++TR +LALECGNI
Sbjct: 602 ALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNI 658
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/269 (46%), Positives = 156/269 (57%), Gaps = 66/269 (24%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GYPEVALHFVKD++TR +LALECGNI+IALEAA+ L+DK+
Sbjct: 633 GYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKN-------------------- 672
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLLHYF 572
C++ KL + L+ GN +I E+ YQ
Sbjct: 673 CWE------KLGEVALLQGN-------HQIVEM------CYQRTK--------------- 698
Query: 573 SFFFFAFLRLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCG 632
F +L+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CG
Sbjct: 699 -----NFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCG 753
Query: 633 QTSLAYLTAATHGLSEEAAELESNLRTADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPL 691
Q SLAYL+AATHGL EEA L+ T DP T+P + P A+LL+PPAP+ +TNWPL
Sbjct: 754 QKSLAYLSAATHGLDEEAESLK---ETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPL 810
Query: 692 LTVTKKMSSVGCEEIFYAGTGALLCREAD 720
LTV+K I G G L + D
Sbjct: 811 LTVSKGFFE---GSIASKGKGGALAADID 836
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Query: 753 G 753
Sbjct: 504 A 504
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 548 bits (1413), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/484 (54%), Positives = 329/484 (67%), Gaps = 92/484 (19%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
N QP+FVSGGDDYKIKVWNYK +C+FTLLGHLDYIRT FHHEYPWI+SASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----- 175
NWQSR C+ VLTGHNHYVMCA FHP +D+VVSASLDQT+RVWDI LRKK V+P
Sbjct: 121 NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMR 180
Query: 176 ----------------------------------------MGADDRQIKLWRMNDSKAWE 195
GADDRQ+KLWRMN++KAWE
Sbjct: 181 LTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
Query: 196 VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVS 255
VD RGH NNVS V+FH K ++IVSN+EDKSIR+WD TKRT L TFRRE +R
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDR-------- 292
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAY 315
FW+L HP +NL AAGHD+GM+VFK ERERPA+
Sbjct: 293 ---------------------------FWILAVHPEMNLLAAGHDSGMIVFKLERERPAF 325
Query: 316 TVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPA-----HSISYNATEHSILVTT 370
+ + ++Y K+RFL + + +DS V+ +R G P+ ++SY+ TE+++L+ +
Sbjct: 326 ALSGDSLFYAKDRFLRYYEYSTQRDSQVIPIRRPG-TPSLNQSPRTLSYSPTENAVLICS 384
Query: 371 RNANNFENSTYDLYMIPKEESERKEVA-DGKRSTGISAVWVARNRFAVLDRNHT-ILIKN 428
+ + +Y+LY+IPK+ R +V D KR TG SAV++ARNRFAVL+++ + +L+KN
Sbjct: 385 ----DLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKN 440
Query: 429 LKNE 432
LKNE
Sbjct: 441 LKNE 444
Score = 194 bits (492), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 201/762 (26%), Positives = 324/762 (42%), Gaps = 139/762 (18%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDY------------------RMNT-LLEKFDE-----HE 51
SFHPK ++S+ + +++WD +MN+ L D E
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDAIVKYVLE 201
Query: 52 GPVRGI---CFHNQQPIFVSGGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYP 106
G RG+ FH P+ VSG DD ++K+W + K + TL GH++ + + FH +
Sbjct: 202 GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQD 261
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
I+S S+D++IR+W+ R + + HP +++ +A D + V+ +
Sbjct: 262 IIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLL-AAGHDSGMIVFKLER 320
Query: 167 LRKKNVAPG---MGADDRQIKLWRMNDSKAWEVDIFR----GHYNNVSCVLFHPKSE--- 216
R G A DR ++ + + + +V R N L + +E
Sbjct: 321 ERPAFALSGDSLFYAKDRFLRYYEYSTQRDSQVIPIRRPGTPSLNQSPRTLSYSPTENAV 380
Query: 217 VIVSNAEDKSIRLWDMTKRTCLNT-FRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNT 275
+I S+ + S L+ + K + + ++ +R V A ++ L T + +
Sbjct: 381 LICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKN 440
Query: 276 FRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNN-VMYYVKERFLHRLD 334
+ E + L PT +F AG G ++ + E + + + V+ ++ F+ +
Sbjct: 441 LKNEVVKKSPLPI-PTDAIFYAG--TGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVV 497
Query: 335 LTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANN------FENSTYDLYMIPK 388
++ +SV + + I + + T H + A + + + Y +P
Sbjct: 498 WSSDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPN 557
Query: 389 EESERKEVADGKRSTGISAVWVARNRFAVLDR---NHTILIKNLKNEYLWRMGNDRQ--- 442
+S D I V+ N LDR N I I EY++++ R+
Sbjct: 558 GDSGIIRTLD----VPIYITKVSGNTIFCLDRDGKNKAITIN--ATEYIFKLSLLRKRYD 611
Query: 443 -------ESALCGWP------GTGYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLE 489
S LCG G+PEVALHFV+D+R R LALE GNI +A+ +A +
Sbjct: 612 HVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNISVAVASATQIN 671
Query: 490 DKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDI 549
+K W RLG AL QGN IVE YQ+TKNF++L+FLYLITGNL+KL K+MKIAE++ ++
Sbjct: 672 EKDHWYRLGVEALRQGNSGIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNV 731
Query: 550 SGQYQAALLLGRMGRGFFLLHYFSFFFFAFLRLAFLYLITGNLEKLKKMMKIAEIRRDIS 609
GQ+ AL LG +K+ +KI E
Sbjct: 732 MGQFHNALYLG---------------------------------DVKERVKILE------ 752
Query: 610 GQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLRTADPNATLPTV 669
+ G LAY+TA+ HGL++ A L + L D +LP
Sbjct: 753 --------------------NAGHLPLAYITASVHGLNDIAERLATEL--GDNVPSLPE- 789
Query: 670 HPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEEIFYAGT 711
LL PP P+ +WPLL V K + G E GT
Sbjct: 790 GKTPSLLMPPTPIM-CGGDWPLLRVMKGIFEGGLESADRGGT 830
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 140/233 (60%), Gaps = 32/233 (13%)
Query: 781 KRALAQVKVAKCRHVLYNKG------EEIFYAGTGALLCREADHVILFDVQQKRALAQVK 834
+++ +QV V ++ + K + IFYAGTG LLCR D V++FD+QQ+ L +++
Sbjct: 430 EKSTSQVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQ 489
Query: 835 VAKCRHVVWSPDMTHLALLSKHTLHICNRKM-------------EGA----GLMKSDVIN 877
R+VVWS DM +ALLSKHT+ I ++K+ GA G+ +N
Sbjct: 490 TPFVRYVVWSSDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLN 549
Query: 878 NI-------DSSLAATEVDVQGWGDDADLGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 930
+I DS + T +DV + GN ++ LDR+ + I+ TE+ FKL+L+
Sbjct: 550 HIKYCLPNGDSGIIRT-LDVPIYITKVS-GNTIFCLDRDGKNKAITINATEYIFKLSLLR 607
Query: 931 HKYEEVLHIVRNSRLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
+Y+ V+ +++NS+L GQ++IAYLQQKG+PEVALHFV+D+R R LALE GNI
Sbjct: 608 KRYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI 660
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
V K + + IFYAGTG LLCR D V++FD+QQ+ L +++ R+VV + M SV
Sbjct: 446 VKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSSDMESV 505
Query: 753 G 753
Sbjct: 506 A 506
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 545 bits (1403), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/483 (54%), Positives = 329/483 (68%), Gaps = 90/483 (18%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHP+RPWIL+SLH+GVIQ+WDYRM TLL++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QP+FVSGGDDYKIKVWNYK +C+FTL GHLDYIRT FHHEYPWI+SASDDQTIRIW
Sbjct: 61 ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----- 175
NWQSR C+ VLTGHNHYVMCA FHP +D+VVSASLDQT+RVWDI LRKK V+P
Sbjct: 121 NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
Query: 176 ----------------------------------------MGADDRQIKLWRMNDSKAWE 195
GADDRQ+KLWRMND+KAWE
Sbjct: 181 LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE 240
Query: 196 VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVS 255
VD RGH NNVSCV+FH K ++IVSN+EDKSIR+WD TKRT + TFRRE +R
Sbjct: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDR-------- 292
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAY 315
FW+L AHP +NL AAGHD+GM+VFK ERERPA+
Sbjct: 293 ---------------------------FWILSAHPEMNLLAAGHDSGMIVFKLERERPAF 325
Query: 316 TVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAH----SISYNATEHSILVTTR 371
+V + ++YVK+RFL + T K+ + +R G + + ++SY+ TE+++L+ +
Sbjct: 326 SVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPGSVSLNQSPKTLSYSPTENAVLICS- 384
Query: 372 NANNFENSTYDLYMIPKEESERKE-VADGKRSTGISAVWVARNRFAVLDR-NHTILIKNL 429
+ + +Y+LY++PK+ + R + + D K+ G SAV+VARNRFAVL++ ++ +L+KNL
Sbjct: 385 ---DVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNL 441
Query: 430 KNE 432
KNE
Sbjct: 442 KNE 444
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 130/207 (62%), Gaps = 26/207 (12%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+ I+YAGTG LLC+ D V +FD+QQ+ L +++ ++VVWS DM +ALLSKH + I
Sbjct: 456 DAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESVALLSKHAVVI 515
Query: 861 CNRKM-------------EGA----GLMKSDVINNI-------DSSLAATEVDVQGWGDD 896
N+K+ GA G+ +N+I DS + T +DV +
Sbjct: 516 ANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKT-LDVPIYITR 574
Query: 897 ADLGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQ 956
+GN ++ LDR+ ++ +D +E+ FKLAL+ +Y+ V+ +++NS+L GQ++I+YLQQ
Sbjct: 575 V-IGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQ 633
Query: 957 KGYPEVALHFVKDDRTRLTLALECGNI 983
KG+PEVALHFVKD++TR LALE GNI
Sbjct: 634 KGFPEVALHFVKDEKTRFNLALESGNI 660
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 143/305 (46%), Gaps = 86/305 (28%)
Query: 410 VARNRFAVLDRN-HTILIKNLKNEYLWRMGNDRQ----------ESALCGWP------GT 452
V N LDR+ L+ +EY++++ R+ S LCG
Sbjct: 575 VIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQK 634
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+PEVALHFVKD++TR LALE GNI IA+ +A+ ++DK W RLG AL
Sbjct: 635 GFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEAL---------- 684
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLLHYF 572
R N + + Y T N E
Sbjct: 685 ---RQGNVGIVEYAYQRTKNFE-------------------------------------- 703
Query: 573 SFFFFAFLRLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCG 632
RLAFLYLITG ++K+ M KIA ++ GQ+ AL LG+ +R++IL++ G
Sbjct: 704 --------RLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDALKRVEILENAG 755
Query: 633 QTSLAYLTAATHGLSEEAAELESNLRTADPNATLPTVHPEAQ---LLRPPAPVAEAETNW 689
Q LAY+TA THGL+E A L + L +P++ PE + LL PPAP+ A +W
Sbjct: 756 QLPLAYITATTHGLTEIADRLAAEL-----GENIPSL-PEGKARSLLIPPAPLT-ASGDW 808
Query: 690 PLLTV 694
PLL V
Sbjct: 809 PLLRV 813
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
V K + + I+YAGTG LLC+ D V +FD+QQ+ L +++ ++VV + M SV
Sbjct: 446 VKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESV 505
Query: 753 G 753
Sbjct: 506 A 506
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 542 bits (1397), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/484 (54%), Positives = 327/484 (67%), Gaps = 92/484 (19%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
N QP+FVSGGDDYKIKVWNYK +C+FTLLGHLDYIRT FHHE PWI+SASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----- 175
NWQSR CI VLTGHNHYVMCA FHP +D+VVSASLDQT+RVWDI L+KK+ +P
Sbjct: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMR 180
Query: 176 ----------------------------------------MGADDRQIKLWRMNDSKAWE 195
GADDRQ+KLWRMN++KAWE
Sbjct: 181 FSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
Query: 196 VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVS 255
VD RGH NNVS V+FH K ++IVSN+EDKSIR+WD TKRT + TFRRE +R
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDR-------- 292
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAY 315
FW+L HP +NL AAGHD GM+VFK ERERPA+
Sbjct: 293 ---------------------------FWILAVHPEINLLAAGHDNGMIVFKLERERPAF 325
Query: 316 TVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPA-----HSISYNATEHSILVTT 370
+ + ++Y K+RFL + + KDS V+ +R G P+ ++SY+ TE+++L+ +
Sbjct: 326 ALSGDSLFYAKDRFLRYYEYSTQKDSQVIPIRRPG-TPSLNQSPRTLSYSPTENAVLICS 384
Query: 371 RNANNFENSTYDLYMIPKEESERKEVA-DGKRSTGISAVWVARNRFAVLDRNHT-ILIKN 428
+ + +Y+LY+IPK+ R +V D KR TG SAV++ARNRFAVL+++ + +L+KN
Sbjct: 385 ----DLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKN 440
Query: 429 LKNE 432
LKNE
Sbjct: 441 LKNE 444
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 204/755 (27%), Positives = 323/755 (42%), Gaps = 139/755 (18%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDY------------------RMNT-LLEKFDE-----HE 51
SFHPK ++S+ + +++WD +MN+ L D E
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLFGGVDAIVKYVLE 201
Query: 52 GPVRGI---CFHNQQPIFVSGGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYP 106
G RG+ FH P+ VSG DD ++K+W + K + TL GH++ + + FH +
Sbjct: 202 GHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQD 261
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
I+S S+D++IR+W+ R I + HP +++ +A D + V+ +
Sbjct: 262 IIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLL-AAGHDNGMIVFKLER 320
Query: 167 LRKKNVAPG---MGADDRQIKLWRMNDSKAWEVDIFR----GHYNNVSCVLFHPKSE--- 216
R G A DR ++ + + K +V R N L + +E
Sbjct: 321 ERPAFALSGDSLFYAKDRFLRYYEYSTQKDSQVIPIRRPGTPSLNQSPRTLSYSPTENAV 380
Query: 217 VIVSNAEDKSIRLWDMTKRTCLNT-FRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNT 275
+I S+ + S L+ + K + + ++ +R V A ++ L T + +
Sbjct: 381 LICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKN 440
Query: 276 FRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNN-VMYYVKERFLHRLD 334
+ E + L PT +F AG G ++ + E + + + V+ ++ F+ +
Sbjct: 441 LKNEVVKKSSLPI-PTDAIFYAG--TGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVV 497
Query: 335 LTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANN------FENSTYDLYMIPK 388
+N +SV + + I + + T H + A + + + Y +P
Sbjct: 498 WSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPN 557
Query: 389 EESERKEVADGKRSTGISAVWVARNRFAVLDR---NHTILIKNLKNEYLWRMGNDRQE-- 443
+S D I V+ N LDR N I I EY++++ R++
Sbjct: 558 GDSGIIRTLD----VPIYITKVSGNTIFCLDRDGKNRAITIN--ATEYIFKLALLRKKYD 611
Query: 444 --------SALCGWP------GTGYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLE 489
S LCG G+PEVALHFV+D+R R LALE GNI +A+ +A +
Sbjct: 612 HVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNISVAVASATEIN 671
Query: 490 DKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDI 549
+K W RLG AL QGN +IVE F Y T N E
Sbjct: 672 EKDHWYRLGVEALRQGNSRIVE-------------FAYQQTKNFE--------------- 703
Query: 550 SGQYQAALLLGRMGRGFFLLHYFSFFFFAFLRLAFLYLITGNLEKLKKMMKIAEIRRDIS 609
RL+FLYLITGNL+KL K+MKIAE++ ++
Sbjct: 704 -------------------------------RLSFLYLITGNLDKLSKLMKIAEVKNNVM 732
Query: 610 GQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLRTADPNATLPTV 669
GQ+ AL LG+V ER+KIL++ G LAY+TA+ HGL++ A L L D +LP
Sbjct: 733 GQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLTDIAERLAIEL--GDNVPSLPE- 789
Query: 670 HPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCE 704
LL PP+P+ +WPLL V K + G E
Sbjct: 790 GKTPSLLMPPSPIM-CGGDWPLLRVMKGIFEGGLE 823
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 140/233 (60%), Gaps = 32/233 (13%)
Query: 781 KRALAQVKVAKCRHVLYNKG------EEIFYAGTGALLCREADHVILFDVQQKRALAQVK 834
+++ +QV V ++ + K + IFYAGTG LLCR D V++FD+QQ+ L +++
Sbjct: 430 EKSTSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQ 489
Query: 835 VAKCRHVVWSPDMTHLALLSKHTLHICNRKM-------------EGA----GLMKSDVIN 877
R+VVWS DM +ALLSKHT+ I ++K+ GA G+ +N
Sbjct: 490 TPFVRYVVWSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLN 549
Query: 878 NI-------DSSLAATEVDVQGWGDDADLGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 930
+I DS + T +DV + GN ++ LDR+ + I+ TE+ FKLAL+
Sbjct: 550 HIKYCLPNGDSGIIRT-LDVPIYITKVS-GNTIFCLDRDGKNRAITINATEYIFKLALLR 607
Query: 931 HKYEEVLHIVRNSRLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
KY+ V+ +++NS+L GQ++IAYLQQKG+PEVALHFV+D+R R LALE GNI
Sbjct: 608 KKYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI 660
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 694 VTKKMS-SVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSS 751
V KK S + + IFYAGTG LLCR D V++FD+QQ+ L +++ R+VV + M S
Sbjct: 445 VVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSNDMES 504
Query: 752 VG 753
V
Sbjct: 505 VA 506
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 540 bits (1392), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/483 (53%), Positives = 330/483 (68%), Gaps = 90/483 (18%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHP+RPWIL+SLH+GVIQ+WDYRM TLL++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QP+FVSGGDDYKIKVWNYK +C+FTL GHLDYIRT FHHE PWI+SASDDQTIRIW
Sbjct: 61 ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHECPWIVSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----- 175
NWQSR C+ VLTGHNHYVMCA FHP +D+VVSASLDQT+RVWDIS LRKK+V+P
Sbjct: 121 NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDISALRKKSVSPADDILR 180
Query: 176 ----------------------------------------MGADDRQIKLWRMNDSKAWE 195
GADDRQ+K+WRMND+KAWE
Sbjct: 181 LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE 240
Query: 196 VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVS 255
VD RGH NNVSCV+FH K ++IVSN+EDKSIR+WD TKRT + TFRRE +R
Sbjct: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDR-------- 292
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAY 315
FW+L AHP +NL AAGHD+GM+VFK ERERPA+
Sbjct: 293 ---------------------------FWILSAHPEMNLLAAGHDSGMIVFKLERERPAF 325
Query: 316 TVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAH----SISYNATEHSILVTTR 371
+V + ++YVK+RFL + T K+ + +R G + + ++SY+ TE+++L+ +
Sbjct: 326 SVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPGSVSLNQSPKTLSYSPTENAVLICS- 384
Query: 372 NANNFENSTYDLYMIPKEESERKE-VADGKRSTGISAVWVARNRFAVLDR-NHTILIKNL 429
+ + +Y+LY++PK+ + R + + D K+ G SAV+VARNRFAVL++ ++ +L++NL
Sbjct: 385 ---DVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVFVARNRFAVLEKSSNQVLVRNL 441
Query: 430 KNE 432
KNE
Sbjct: 442 KNE 444
Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 131/207 (63%), Gaps = 26/207 (12%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+ I+YAGTG+LLC+ D V +FD+QQ+ L +++ ++VVWS DM +ALLSKH + I
Sbjct: 456 DAIYYAGTGSLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESVALLSKHAVVI 515
Query: 861 CNRKM-------------EGA----GLMKSDVINNI-------DSSLAATEVDVQGWGDD 896
N+K+ GA G+ +N+I DS + T +DV +
Sbjct: 516 ANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKT-LDVPIYITR 574
Query: 897 ADLGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQ 956
+GN ++ LDR+ ++ +D +E+ FKLAL+ +Y+ V+ +++NS+L GQ++I+YLQQ
Sbjct: 575 V-IGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQ 633
Query: 957 KGYPEVALHFVKDDRTRLTLALECGNI 983
KG+PEVALHFVKD++TR LALE GNI
Sbjct: 634 KGFPEVALHFVKDEKTRFNLALESGNI 660
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 149/315 (47%), Gaps = 86/315 (27%)
Query: 410 VARNRFAVLDRN-HTILIKNLKNEYLWRMGNDRQ----------ESALCGWP------GT 452
V N LDR+ L+ +EY++++ R+ S LCG
Sbjct: 575 VIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQK 634
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+PEVALHFVKD++TR LALE GNI IA+ +A+ ++DK W RLG AL QGN IVE
Sbjct: 635 GFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEY 694
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLLHYF 572
YQRTKNF++LAFLYLITG ++K+ M KIA ++ GQ+ AL LG
Sbjct: 695 AYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLG------------ 742
Query: 573 SFFFFAFLRLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCG 632
MK EI + +GQ A
Sbjct: 743 ------------------------DAMKRVEILEN-AGQLPLA----------------- 760
Query: 633 QTSLAYLTAATHGLSEEAAELESNLRTADPNATLPTVHPEAQ---LLRPPAPVAEAETNW 689
Y+TA THGL+E A L + L +P++ PE + LL PPAP+ A +W
Sbjct: 761 -----YITATTHGLTEIADRLAAEL-----GENIPSL-PEGKARSLLIPPAPLT-ASGDW 808
Query: 690 PLLTVTKKMSSVGCE 704
PLL V + + G +
Sbjct: 809 PLLRVMRGIFEGGLD 823
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
V K + + I+YAGTG+LLC+ D V +FD+QQ+ L +++ ++VV + M SV
Sbjct: 446 VKKSPLPIATDAIYYAGTGSLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESV 505
Query: 753 G 753
Sbjct: 506 A 506
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/483 (53%), Positives = 327/483 (67%), Gaps = 90/483 (18%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHP+RPWIL+SLH+GVIQ+WDYRM TLL++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QP+FVSGGDDYKIKVWNYK +C+FTL GHLDYIRT FHHEYPWI+SASDDQTIRIW
Sbjct: 61 ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----- 175
NWQSR C+ VLTGHNHYVMCA FHP +D+VVSASLDQT+RVWDI LRKK V+P
Sbjct: 121 NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
Query: 176 ----------------------------------------MGADDRQIKLWRMNDSKAWE 195
GADDRQ+KLWRMND+KAWE
Sbjct: 181 LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE 240
Query: 196 VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVS 255
VD RGH NNVSCV+FH K ++IVSN+EDKSIR+WD TKRT + TFRRE +R
Sbjct: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDR-------- 292
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAY 315
FW+L AHP +NL AAGHD GM+VFK ERERPA+
Sbjct: 293 ---------------------------FWILAAHPEMNLLAAGHDNGMIVFKLERERPAF 325
Query: 316 TVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRI----PAHSISYNATEHSILVTTR 371
+V + ++YVK+RFL + + K+ + +R G + ++SY+ TE+++L+ +
Sbjct: 326 SVSGDTVFYVKDRFLRFFEYSTQKEVQLAPIRRPGSVSLNQSPRTLSYSPTENAVLICS- 384
Query: 372 NANNFENSTYDLYMIPKEESERKE-VADGKRSTGISAVWVARNRFAVLDR-NHTILIKNL 429
+ + +Y+LY++PK+ + R + + + K+ G SAV+VARNRFAVL++ ++ +L+KNL
Sbjct: 385 ---DVDGGSYELYIVPKDSAGRTDYLQEAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNL 441
Query: 430 KNE 432
KNE
Sbjct: 442 KNE 444
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 131/207 (63%), Gaps = 26/207 (12%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+ I+YAGTG LLC+ D V +FD+QQ+ L +++ ++VVWS DM +ALLSKH + I
Sbjct: 456 DAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPAVKYVVWSSDMESIALLSKHAVVI 515
Query: 861 CNRKM-------------EGA----GLMKSDVINNI-------DSSLAATEVDVQGWGDD 896
N+K+ GA G+ +N+I DS + T +DV +
Sbjct: 516 ANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKT-LDVPIYITR 574
Query: 897 ADLGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQ 956
A +GN ++ LDR+ ++ +D +E+ FKLAL+ +Y+ V+ +++NS+L GQ++I+YLQQ
Sbjct: 575 A-IGNNIFCLDRDGKNKLITVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQ 633
Query: 957 KGYPEVALHFVKDDRTRLTLALECGNI 983
KG+PEVALHFVKD++TR LALE GNI
Sbjct: 634 KGFPEVALHFVKDEKTRFNLALESGNI 660
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 148/312 (47%), Gaps = 86/312 (27%)
Query: 413 NRFAVLDRN-HTILIKNLKNEYLWRMGNDRQ----------ESALCGWP------GTGYP 455
N LDR+ LI +EY++++ R+ S LCG G+P
Sbjct: 578 NNIFCLDRDGKNKLITVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFP 637
Query: 456 EVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQ 515
EVALHFVKD++TR LALE GNI IA+ +A+ ++DK W RLG AL QGN IVE YQ
Sbjct: 638 EVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQ 697
Query: 516 RTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLLHYFSFF 575
RTKNF++LAFLYLITG ++K+ M KIA ++ GQ+ AL LG
Sbjct: 698 RTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLG--------------- 742
Query: 576 FFAFLRLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTS 635
MK EI + +GQ A +
Sbjct: 743 ---------------------DAMKRVEILEN-AGQLPLAYI------------------ 762
Query: 636 LAYLTAATHGLSEEAAELESNLRTADPNATLPTVHPEAQ---LLRPPAPVAEAETNWPLL 692
TAATHGL+E A L + L +P++ PE + LL PPAP+ A +WPLL
Sbjct: 763 ----TAATHGLTEIADRLAAEL-----GENIPSL-PEGKTRSLLIPPAPLT-ASGDWPLL 811
Query: 693 TVTKKMSSVGCE 704
V + + G +
Sbjct: 812 RVMRGIFEGGLD 823
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
V K + + I+YAGTG LLC+ D V +FD+QQ+ L +++ ++VV + M S+
Sbjct: 446 VKKSPLPIAMDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPAVKYVVWSSDMESI 505
Query: 753 G 753
Sbjct: 506 A 506
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/487 (48%), Positives = 302/487 (62%), Gaps = 95/487 (19%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE++S+R KG++FHP +PWIL+SLHNG IQLWDYRM TLL++FD H+GPVRGI FH
Sbjct: 3 MLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFH 62
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QP+FVSGGDDYK+ VWNYK RK +F+L GH+DY+R FHHEYPWILS SDDQTIRIW
Sbjct: 63 PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIW 122
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGAD 179
NWQSRNCI +LTGH+HYVMCA FHP++D++VSASLDQT+RVWDISGLR KN AP M +
Sbjct: 123 NWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLE 182
Query: 180 D--------------------------------------------------RQIKLWRMN 189
D R +KLWRM
Sbjct: 183 DQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMT 242
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 249
SKAWEVD RGH+NNVSC LFHP E+I+S +EDK+IR+WD+ +RT + TFRR+ +R
Sbjct: 243 ASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDR-- 300
Query: 250 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFE 309
FW + HP LNLFAA HD+G++VFK E
Sbjct: 301 ---------------------------------FWFITVHPKLNLFAAAHDSGVMVFKLE 327
Query: 310 RERPAYTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLR--GGGRIPAHSISYNATEHSI 366
RERPA+ ++ N + YV KE+ + DL ++ + V ++ G +P S+SYN E
Sbjct: 328 RERPAHALNINTLLYVNKEKSIVSYDLLRAQSTTVASVKHLGSAWLPPRSLSYNPAEKVA 387
Query: 367 LVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNRFAVLDR-NHTIL 425
L+T+ + +N Y+L + S + D + G A++VARNRFAV R + TI
Sbjct: 388 LLTS----SADNGVYELVNV-SSRSNSLPLKDNIKGPGDDAIFVARNRFAVFSRSDQTIE 442
Query: 426 IKNLKNE 432
IK+L N+
Sbjct: 443 IKDLSNK 449
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 119/220 (54%), Gaps = 42/220 (19%)
Query: 796 LYNKGEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSK 855
L K +IF+AG G +L A V LFD+QQK+ ++ + ++VVWS D + ALL K
Sbjct: 456 LPEKTRDIFFAGMGHVLLSTATQVHLFDLQQKKIVSSFNANRVKYVVWSNDNSQAALLGK 515
Query: 856 HTLHICNRKME------------------------------GAGLMKSD--VINNIDSSL 883
H ++I + +E LM D VI ++S+L
Sbjct: 516 HYVYIVKKNLELITSIHETIRIKSAVWVENNVLLYATLDHLKYALMSGDTGVIKTLESTL 575
Query: 884 AATEVDVQGWGDDADLGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNS 943
+ GN V+ L+R P IDPTE+ FKLAL+ YE+VLH+++NS
Sbjct: 576 YLVKAK----------GNMVFALNRAAEPVSFEIDPTEYLFKLALLRKDYEQVLHLIQNS 625
Query: 944 RLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
LVGQ+IIAYLQ+KGYPE+AL FV+D TR LALECGN+
Sbjct: 626 NLVGQAIIAYLQKKGYPEIALQFVEDPSTRFELALECGNL 665
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 115/244 (47%), Gaps = 63/244 (25%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GYPE+AL FV+D TR LALECGN++ ALE AR ++ VW RL A+ GNH
Sbjct: 640 GYPEIALQFVEDPSTRFELALECGNLETALELARTIDRPEVWSRLASDAMSYGNH----- 694
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLLHYF 572
KIAEI F L YF
Sbjct: 695 ----------------------------KIAEIT-------------------FQKLRYF 707
Query: 573 SFFFFAFLRLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCG 632
+L+FLYLITGN EKL+KM IAE R D +Q +L L EV RI IL+ G
Sbjct: 708 E-------KLSFLYLITGNAEKLQKMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAG 760
Query: 633 QTSLAYLTAATHGLSEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAET-NWPL 691
+AYLTA ++GL E+A ++ S+ + LP++ P PV E T NWPL
Sbjct: 761 MYPIAYLTAKSNGLEEKAQQILSHCNKTEEEIKLPSL---GSAFTTPVPVNETYTHNWPL 817
Query: 692 LTVT 695
L +
Sbjct: 818 LDTS 821
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 705 EIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV 745
+IF+AG G +L A V LFD+QQK+ ++ + ++VV
Sbjct: 462 DIFFAGMGHVLLSTATQVHLFDLQQKKIVSSFNANRVKYVV 502
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3
SV=1
Length = 1221
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/486 (47%), Positives = 310/486 (63%), Gaps = 98/486 (20%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
ML KFETK++RVKGLSFHP RPWIL+SLH+G I L+DYR+ TLLEKFDEHEGPVRGI FH
Sbjct: 1 MLYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QP+FVSGGDDYKIKVWNYKQR+C+FTL GH DYIR+ FH E PWI+S+SDD IRIW
Sbjct: 61 MTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK--NVAP---- 174
NWQSR CI L GHNHYVM A FHP DD+VVSASLDQTIR+WDISGL+KK V P
Sbjct: 121 NWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMTTVKPYREN 180
Query: 175 -------------------------GM--------------GADDRQIKLWRMNDSKAWE 195
G+ +DD Q+KLWRMND
Sbjct: 181 DPMRLQDELFGTDISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMNDPI--- 237
Query: 196 VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVS 255
VD FRGHYNNVSC LFHP+ ++I+SN+EDK+IR+WD+ K++ ++ RR+ +RFW+
Sbjct: 238 VDTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWT----- 292
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAY 315
L +HP NLFAAGHD+GM+VFK ERERP +
Sbjct: 293 ------------------------------LASHPNQNLFAAGHDSGMIVFKLERERPLF 322
Query: 316 TVHNNV-MYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAH----SISYNATEHSILVTT 370
+ + ++++K++ + D + + + ++P++ ++SYN TE +ILV++
Sbjct: 323 VQNGDSGVFFLKKKNFNSFDFQAGRTVSLFHI---SKLPSNNGTQTMSYNQTERAILVSS 379
Query: 371 RNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLK 430
+ E +Y LY IP ++S + K+ TG++A++V R+RFAVLD+ + ++I++L+
Sbjct: 380 ----DAEGGSYHLYKIPPKDS---NTVNTKKGTGVAAIFVGRDRFAVLDKGNNVVIRDLE 432
Query: 431 NEYLWR 436
NE + R
Sbjct: 433 NEEIKR 438
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 141/257 (54%), Gaps = 65/257 (25%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GYP+V +HFVKDDRTR LAL+ GNIDIAL +A++L+DK W RLG AL QGN+Q+VEM
Sbjct: 626 GYPDV-VHFVKDDRTRFNLALDAGNIDIALSSAKILDDKDCWNRLGVEALKQGNYQVVEM 684
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLLHYF 572
Y RT FD+L+FLYL+ GNL LKKM+ Y+++ ++ R
Sbjct: 685 AYSRTSEFDRLSFLYLLVGNLSTLKKMI-----------SYESSDIMSR----------- 722
Query: 573 SFFFFAFLRLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCG 632
F F+ LYL G++E+ K+++ A G
Sbjct: 723 --FHFS------LYL--GDVEERIKILQEA-----------------------------G 743
Query: 633 QTSLAYLTAATHGLSEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPV--AEAETNWP 690
LAY+TA+ HGL+E+A + NL T+D + LP + ++ LL PP+P+ E NWP
Sbjct: 744 LHQLAYITASIHGLTEKAESI-GNLITSDGKSQLPQLPKQSYLLVPPSPINCNPNELNWP 802
Query: 691 LLTVTKKMSSVGCEEIF 707
LLT TK +S V E F
Sbjct: 803 LLTTTKSVSDVMGENRF 819
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 151/274 (55%), Gaps = 34/274 (12%)
Query: 733 LAQVKVAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKC 792
L ++ V TKK G IF + + ++V++ D++ + ++ +C
Sbjct: 388 LYKIPPKDSNTVNTKK--GTGVAAIFVGRDRFAVLDKGNNVVIRDLENE------EIKRC 439
Query: 793 RHVLYNKGEEIFYAGT-GALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLA 851
+ + + I+ +G+ G +L + D + +FD+QQK+ L +++V R+V+WS D ++A
Sbjct: 440 Q--IPFTIDWIYPSGSPGTILIQSEDKIHMFDIQQKKMLCEIQVHGVRYVIWSKDRNYVA 497
Query: 852 LLSKHTLHICNRKMEGAGLM------KSDVINNIDSSLAATEVDVQGWGDDADLG----- 900
L++ + + N+K+E ++ KS V ++ + +T ++ + D G
Sbjct: 498 FLTRDFIVLANKKLEQICMIHETVLPKSGVWDDNGVFIYSTSNHLKYLLQNGDNGTIRTL 557
Query: 901 -----------NQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQS 949
N+V+ +DRE ++ ID TE+ KL+L+ Y +V+ I+R +RLVG++
Sbjct: 558 ESTIYITGVKNNKVFAIDREFKNRIIEIDTTEYVLKLSLLQQNYNQVMTILRENRLVGKA 617
Query: 950 IIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
IIAYLQ+KGYP+V +HFVKDDRTR LAL+ GNI
Sbjct: 618 IIAYLQKKGYPDV-VHFVKDDRTRFNLALDAGNI 650
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 706 IFYAGT-GALLCREADHVILFDVQQKRALAQVKVAKCRHVVTKK 748
I+ +G+ G +L + D + +FD+QQK+ L +++V R+V+ K
Sbjct: 448 IYPSGSPGTILIQSEDKIHMFDIQQKKMLCEIQVHGVRYVIWSK 491
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/485 (45%), Positives = 292/485 (60%), Gaps = 94/485 (19%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE+KS R KG++FHP RPW+L +L + IQLWDYRM TLL +F++HEGPVRG+ FH
Sbjct: 3 MLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QPIFVS GDDY IKVW+ KC++TL GHLDY+RT FFH E PWI+SASDDQTIRIW
Sbjct: 63 PTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIW 122
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---- 176
NWQ+R I LTGHNH+VMCAQFHPTDD++VSASLD+TIR+WDISGLRK++ APG
Sbjct: 123 NWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFE 182
Query: 177 --------------------------------------------GADDRQIKLWRMNDSK 192
G+DDRQ+KLWRM+ +K
Sbjct: 183 EQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATK 242
Query: 193 AWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV 252
AWEVD RGH NNV V+FHP +I+S EDK++R+WD+ KRT + F+RE +R
Sbjct: 243 AWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDR----- 297
Query: 253 IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERER 312
FW++ AHP +NLF A HD+G++VFK +RER
Sbjct: 298 ------------------------------FWLIAAHPHINLFGAAHDSGIMVFKLDRER 327
Query: 313 PAYTVHNNVMYYVK-ERFLHRLDLTNSKDSV-VMQLRGGGRI--PAHSISYNATEHSILV 368
P +H N +++V E+ + + S+ L+G G+ SISYN ++HS+LV
Sbjct: 328 PCSFIHQNQLFFVNAEKQIQSFNFQKRVASLPYASLKGIGQPWDAFRSISYNPSQHSVLV 387
Query: 369 TTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNRFAVLDRN-HTILIK 427
N N + L ++PK+ E + TG A +V RNRF V ++N ++ ++
Sbjct: 388 ------NEANGKFALVILPKQPVGAVEPTSVTQDTGNFATFVGRNRFVVYNKNTESVEVR 441
Query: 428 NLKNE 432
+L+N+
Sbjct: 442 SLENK 446
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 125/240 (52%), Gaps = 45/240 (18%)
Query: 789 VAKCRHVLYNKGEE-----------------------IFYAGTGALLCREADHVILFDVQ 825
V + R V+YNK E I AG G++L VIL+DVQ
Sbjct: 423 VGRNRFVVYNKNTESVEVRSLENKVTRNIKVEETVRTIVAAGPGSVLVIHPREVILYDVQ 482
Query: 826 QKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHICNRKME-----------------GA 868
Q + ++Q+ V ++V WS D ++AL+SKHT+ + +K+E
Sbjct: 483 QGKKVSQLAVKNVKYVSWSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSAAWDET 542
Query: 869 GLMKSDVINNIDSSLAATEVDVQGWGDDADL-----GNQVYYLDRECSPHVLRIDPTEFK 923
G++ +N+I SL + + + G VY L+RE +L IDPTE++
Sbjct: 543 GVLIYSTLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNREGEIEILTIDPTEYR 602
Query: 924 FKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
FK AL+N + EVL ++++S LVGQ+II+YLQ+ GYPE+AL FV+D R LALE GN+
Sbjct: 603 FKKALVNKNFPEVLRLIKDSNLVGQNIISYLQKSGYPEIALQFVQDPHIRFDLALEYGNL 662
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%)
Query: 452 TGYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVE 511
+GYPE+AL FV+D R LALE GN+D+AL+ A+ L D S WERL AL QGN + E
Sbjct: 636 SGYPEIALQFVQDPHIRFDLALEYGNLDVALDEAKKLNDSSTWERLIQEALAQGNASLAE 695
Query: 512 MCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRD 548
M YQ +FDKL+FLYL+TG++ KL KM IA+ R D
Sbjct: 696 MIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTRED 732
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 578 AFLRLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLA 637
+F +L+FLYL+TG++ KL KM IA+ R D ER I G LA
Sbjct: 703 SFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLA 762
Query: 638 YLTAATHGLSEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPL 691
Y A +G A+ + + TLP + ++ P +++ WPL
Sbjct: 763 YAVAKANGDEAAASAFLEQAEVDEQDVTLPDQMDASNFVQRPV-ISKPLEKWPL 815
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 41/362 (11%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQ------------LGSSSP 177
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE--VIVSNAEDKSIRLWDMTKRTCLN 239
L GH V+C+ ++ + ++S A+D+ +++WD +TC+
Sbjct: 178 NFTL--------------EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 240 TFRREQER-----FWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
T + F E +I++ +ED ++R+W + +T ER W + +
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGR 351
N A G+D G ++ K RE PA ++ N + + K + + +L D+ +++ G R
Sbjct: 284 NNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIKDGER 340
Query: 352 IP 353
+P
Sbjct: 341 LP 342
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLL 569
C +++ L L +GN + K+ + AE + + + L G++ LL
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 41/362 (11%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQ------------LGSSSP 177
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE--VIVSNAEDKSIRLWDMTKRTCLN 239
L GH V+C+ ++ + ++S A+D+ +++WD +TC+
Sbjct: 178 NFTL--------------EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 240 TFRREQER-----FWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
T + F E +I++ +ED ++R+W + +T ER W + +
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGR 351
N A G+D G ++ K RE PA ++ N + + K + + +L D+ +++ G R
Sbjct: 284 NNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIKDGER 340
Query: 352 IP 353
+P
Sbjct: 341 LP 342
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRD-----------ISGQYQAAL-LLG 560
C +++ L L +GN + K+ + AE RD + G+ A L LL
Sbjct: 689 CLHHAQDYGGLLLLATASGNANMVNKLAEGAE--RDGKNNVAFMSYFLQGKVDACLELLI 746
Query: 561 RMGR 564
R GR
Sbjct: 747 RTGR 750
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 41/362 (11%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQ------------LGSSSP 177
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE--VIVSNAEDKSIRLWDMTKRTCLN 239
L GH V+C+ ++ + ++S A+D+ +++WD +TC+
Sbjct: 178 NFTL--------------EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 240 TFRREQER-----FWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
T + F E +I++ +ED ++R+W + +T ER W + +
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGR 351
N A G+D G ++ K RE PA ++ N + + K + + +L D+ +++ G R
Sbjct: 284 NNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDT---EIKDGER 340
Query: 352 IP 353
+P
Sbjct: 341 LP 342
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLL 569
C +++ L L +GN + K+ + AE + + + L G++ LL
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 41/362 (11%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQ------------LGSSSP 177
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE--VIVSNAEDKSIRLWDMTKRTCLN 239
L GH V+C+ ++ + ++S A+D+ +++WD +TC+
Sbjct: 178 NFTL--------------EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 240 TFRREQER-----FWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
T + F E +I++ +ED ++R+W + +T ER W + +
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGR 351
N A G+D G ++ K RE PA ++ N + + K + + +L D+ +++ G R
Sbjct: 284 NNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIKDGER 340
Query: 352 IP 353
+P
Sbjct: 341 LP 342
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRD-----------ISGQYQAAL-LLG 560
C +++ L L +GN + K+ + AE RD + G+ A L LL
Sbjct: 689 CLHHAQDYGGLLLLATASGNANMVNKLAEGAE--RDGKNNVAFMSYFLQGKVDACLELLI 746
Query: 561 RMGR 564
R GR
Sbjct: 747 RTGR 750
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 181/362 (50%), Gaps = 41/362 (11%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQ------------LGSSSP 177
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE--VIVSNAEDKSIRLWDMTKRTCLN 239
L GH V+C+ ++ + ++S A+D+ +++WD +TC+
Sbjct: 178 NFTL--------------EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 240 TFRREQER-----FWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
T + F E +I++ +ED ++R+W + +T ER W + +
Sbjct: 224 TPEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGR 351
N A G+D G ++ K RE PA ++ N + + K + + +L D+ +++ G R
Sbjct: 284 NNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDT---EIKDGER 340
Query: 352 IP 353
+P
Sbjct: 341 LP 342
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLL 569
C +++ L L +GN + K+ + AE + + + L G++ LL
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 175/373 (46%), Gaps = 63/373 (16%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG------ 175
+ +C V GH HYVM +P D + SASLD+TI+VW + G
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 189
Query: 176 --------------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
GADDR +K+W + V GH NVSC FHP+ +I++
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHAQNVSCASFHPELPIIITG 247
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 281
+ED ++R+W + T+R E +T E
Sbjct: 248 SEDGTVRIWHSS------TYRLE-----------------------------STLNYGME 272
Query: 282 RFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKD 340
R W + + N A G D G ++ K RE PA ++ N + + K + + +L +
Sbjct: 273 RVWCVASLRGSNNVALGCDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGN 332
Query: 341 SVVMQLRGGGRIP 353
+ +++ G R+P
Sbjct: 333 A---EIKDGERLP 342
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRD-----------ISGQYQAAL-LLG 560
C +++ L L +GN + K+ + AE RD + G+ A L LL
Sbjct: 689 CLHHAQDYGGLLLLATASGNANMVNKLAEGAE--RDGKNNVAFMSYFLQGKVDACLELLI 746
Query: 561 RMGR 564
R GR
Sbjct: 747 RTGR 750
>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
GN=Os06g0143900 PE=2 SV=1
Length = 907
Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 138/269 (51%), Gaps = 24/269 (8%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
KF +S RVK + HP PWILSSL++G + +WDY+ T+++ F+ E PVR F +++
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPVRSAKFISRK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW- 122
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWD 129
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG------ 175
+ C + GH+HYVM F+P D + SASLD+T ++W + G
Sbjct: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTTKIWSLGSPDPNFTLDGHQKGVN 189
Query: 176 --------------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
G+DD K+W V GH +N+S V FHP+ +I++
Sbjct: 190 CVDYFTGGDRPYLITGSDDSTAKVWDYQTKSC--VQTLEGHTHNISAVCFHPELPIIITG 247
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWS 250
+ED ++R+W T NT ER W+
Sbjct: 248 SEDGTVRIWHSTTYRLENTLNYGLERVWA 276
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G E AL D R LA++ G +++A A + +S W++LG A+ G + E
Sbjct: 630 GMLEEALEIATDADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQLGELAMSTGKLDMAEE 689
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRM 562
C + K+ L LY G+ E ++K+ A+ + + +LG++
Sbjct: 690 CLVQAKDLSGLLLLYSSLGDAEGIEKLASQAKEHGKNNVAFLCLFMLGKL 739
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 142/269 (52%), Gaps = 24/269 (8%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
KF +S RVK + HP PWIL+SL++G + +W+Y+ T+++ FD E PVR F ++
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD I+V+NY I H DYIR H P++LS+SDD I++W+W+
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDIS-------------GLR 168
C + GH+HYVM F+P D + SASLD+TI++W++ G+
Sbjct: 130 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVN 189
Query: 169 KKNVAPG-------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
+ G G+DD K+W V GH +NVS V FHP+ +I++
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC--VQTLEGHTHNVSAVSFHPELPIIITG 247
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWS 250
+ED ++R+W T NT ER W+
Sbjct: 248 SEDGTVRIWHATTYRLENTLNYGLERVWA 276
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 116/274 (42%), Gaps = 45/274 (16%)
Query: 46 KFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 105
KF + V+ + H +P ++ + +WNY+ + + + +R+ F
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 69
Query: 106 PWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+++ +DD IR++N+ + + I V H Y+ C HPT V+S+S D I++WD
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWD-- 127
Query: 166 GLRKKNVAPGMGADDRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPK-SEVIVSNAE 223
W K W IF GH + V V F+PK + S +
Sbjct: 128 --------------------WE----KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASL 163
Query: 224 DKSIRLWDMTKR-------------TCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKR 270
D++I++W++ C++ F + + +++ ++D + ++WD +
Sbjct: 164 DRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPY----LITGSDDHTAKVWDYQTK 219
Query: 271 TCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMV 304
+C+ T + HP L + G + G V
Sbjct: 220 SCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTV 253
Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G E AL D R LA++ G + +A + A +++S W++LG A+ G + E
Sbjct: 629 GMTEDALEVATDPDYRFELAIQLGRLAVAKDIAVEAQNESKWKQLGELAMSSGKLDMAEE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLLH 570
C + + L LY G+ + MMK+A + ++ A L L +G+ LH
Sbjct: 689 CMRHAMDLSGLLLLYSSLGDAD---GMMKLAALAKEQGKNNVAFLCLFMLGQVEDCLH 743
>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2
SV=1
Length = 909
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 142/269 (52%), Gaps = 24/269 (8%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
KF +S RVK + HP PWIL+SL++G + +W+Y+ T+ + F+ E PVR F ++
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDIS-------------GLR 168
+ C + GH+HYVM F+P D + SASLD+TI++W++ G+
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 169 KKNVAPG-------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
+ G G+DD K+W V GH +NVS V FHP+ +I++
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC--VQTLDGHTHNVSAVCFHPELPIIITG 247
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWS 250
+ED ++R+W T NT ER W+
Sbjct: 248 SEDGTVRIWHATTYRLENTLNYGLERVWA 276
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G E AL D + LA++ G ++IA E A ++ +S W++LG A+ G Q+ E
Sbjct: 630 GMIEDALEIATDPDYKFDLAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAED 689
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLL 569
C + + L LY G+ E + K+ +A+ + + + LGR+ LL
Sbjct: 690 CMKYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNVAFLCLFTLGRLEDCLQLL 746
>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica
GN=Os02g0209000 PE=3 SV=2
Length = 910
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 24/269 (8%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S R K + HP PWILSSL++G + +W+Y+ T+++ F+ E PVR F ++
Sbjct: 10 KLAQRSERAKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFITRK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW- 122
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWD 129
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG------ 175
+ C + GH+HYVM F+P D + SASLD+T++VW + G
Sbjct: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKVWSLGSPDPNFTLDGHSKGVN 189
Query: 176 --------------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
G+DD+ K+W V GH +NVS V FHP+ +I++
Sbjct: 190 CVDYFTGGDRPYLITGSDDQTAKVWDYQTKSC--VQTLEGHAHNVSAVCFHPELPIILTG 247
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWS 250
+ED ++RLW T NT ER W+
Sbjct: 248 SEDGTVRLWHSTTYRLENTLNYGLERVWA 276
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G E AL D R LA++ G +++A A + +S W +LG A+ G + E
Sbjct: 630 GMLEEALEIATDSNYRFDLAVQLGRLEVAKAIAIEAQSESKWRQLGELAMSTGKLDMAEE 689
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLL 569
C + L LY G+ E L K+ +A+ + + + +LG++ LL
Sbjct: 690 CLLHAMDLSGLLLLYSSLGDAEGLTKLTSMAKEQGKNNVAFLCFFMLGKLEECLQLL 746
>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica
GN=Os02g0209100 PE=2 SV=1
Length = 910
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 24/269 (8%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PWILSSL++G + +W+Y+ T+++ F+ E PVR F ++
Sbjct: 10 KLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFIARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW- 122
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W
Sbjct: 70 QWIVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWD 129
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG------ 175
+ C + GH+HYVM F+P D + SASLD+T++VW + G
Sbjct: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKVWSLGSPDPNFTLDGHSKGVN 189
Query: 176 --------------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
G+DD+ K+W V GH +NVS V FHP+ + ++
Sbjct: 190 CVDYFTGGDRPYLITGSDDQTAKVWDYQTKSC--VQTLEGHAHNVSAVCFHPELPITLTG 247
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWS 250
+ED ++RLW T NT ER W+
Sbjct: 248 SEDGTVRLWHSTTYRLENTLNYGLERVWA 276
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 113/266 (42%), Gaps = 45/266 (16%)
Query: 54 VRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
V+ + H +P +S + +WNY+ + + + +R++ F WI++ +D
Sbjct: 18 VKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFIARKQWIVAGAD 77
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 173
D IR++N+ + + + V H Y+ C HPT V+S+S D I++WD
Sbjct: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWD---------- 127
Query: 174 PGMGADDRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPK-SEVIVSNAEDKSIRLWD 231
W K W IF GH + V V F+PK + S + D+++++W
Sbjct: 128 ------------W----DKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKVWS 171
Query: 232 MTKR-------------TCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRR 278
+ C++ F + +++ ++D++ ++WD ++C+ T
Sbjct: 172 LGSPDPNFTLDGHSKGVNCVDYFTGGDRPY----LITGSDDQTAKVWDYQTKSCVQTLEG 227
Query: 279 EQERFWVLVAHPTLNLFAAGHDAGMV 304
+ HP L + G + G V
Sbjct: 228 HAHNVSAVCFHPELPITLTGSEDGTV 253
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 406 SAVWVARNRFAVLDRNHTILIKNLKNEYLWRMGN-DRQESALCGWP------------GT 452
S V++ +F V+ +T+L+ ++ + L G+ DR + L P
Sbjct: 572 SRVYLIDKQFNVV--GYTLLLTMIEYKTLVMRGDFDRANALLPSIPKEQHDSVARFLESQ 629
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G E AL D R LA++ G +++A A + +S W +LG A+ G + E
Sbjct: 630 GMLEEALEIATDSNYRFDLAVQLGRLEVAKAIAIEAQSESKWRQLGELAMSTGKLDMAEE 689
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRMGRGFFLL 569
C + L LY G+ E L K+ +A+ + + + +LG++ LL
Sbjct: 690 CLLHAMDLSGLLLLYSSLGDAEGLTKLTSMAKEQGKNNVAFLCFFMLGKLEECLQLL 746
>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2
SV=1
Length = 926
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 139/269 (51%), Gaps = 24/269 (8%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PWIL+SL++G + +W+Y+ + + F+ E PVR F ++
Sbjct: 10 KLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDIS-------------GLR 168
C + GH+HYVM F+P D + SASLD+TI++W++ G+
Sbjct: 130 KGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 169 KKNVAPG-------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
+ G G+DD K+W V GH +NVS V FHP+ +I++
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC--VQTLEGHTHNVSAVCFHPELPIIITG 247
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWS 250
+ED ++R+W T NT ER W+
Sbjct: 248 SEDGTVRIWHATTYRLENTLNYGLERVWA 276
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G E AL D R LA++ G ++IA E A ++ +S W++LG A+ G Q+ E
Sbjct: 630 GMIEDALEIATDPDYRFELAIQLGRLEIAQEIAVEVQSESKWKQLGELAMSSGKLQMAEE 689
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGRM 562
C + + L LY G+ E + K+ +A+ + + + +LG++
Sbjct: 690 CMKYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNVAFLCLFMLGKL 739
>sp|P41811|COPB2_YEAST Coatomer subunit beta' OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC27 PE=1 SV=1
Length = 889
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 158/326 (48%), Gaps = 38/326 (11%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +S RVKG+ FHP PW+L++L++G ++LW+Y + E PVR F ++
Sbjct: 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN 68
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ G DD++I+V+NY + + H DYIR+ H P++LS SDD T+++WNW++
Sbjct: 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128
Query: 125 RNCI-CVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQ 182
+ GH H+VMC F+P D S LD+T++VW + G N G +
Sbjct: 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL-GQSTPNFTLTTGQE--- 184
Query: 183 IKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE--VIVSNAEDKSIRLWDMTKRTCLNT 240
RG V+ V ++P + +++ ++D +I++WD ++C+ T
Sbjct: 185 -----------------RG----VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223
Query: 241 FRREQERFWSEV-------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT-- 291
V I+S +ED ++++W+ + T ER W + HPT
Sbjct: 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGR 283
Query: 292 LNLFAAGHDAGMVVFKFERERPAYTV 317
N A+G D G V + P ++
Sbjct: 284 KNYIASGFDNGFTVLSLGNDEPTLSL 309
>sp|O62621|COPB2_DROME Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2
SV=2
Length = 914
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 186/387 (48%), Gaps = 47/387 (12%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+ ++S RVK + HP PW+L +L+NG + + +Y +++ F+ + PVR F ++
Sbjct: 10 RLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
++G DD +I+V+NY + + + H DY+R H P +L++SDD I++WNW+
Sbjct: 70 NWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWE 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
C V GH HYVM F+P D+ SASLD+T++VW +G++
Sbjct: 130 KMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQ------------LGSNFA 177
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE--VIVSNAEDKSIRLWDMTKRTCLN 239
L GH V+CV ++ + ++S A+D+ +++WD +TC+
Sbjct: 178 NFTL--------------EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 240 TFRREQERFWS-------EVIVSNAEDKSIRLWDMTK---RTCLNTFRREQERFWVLVAH 289
T + + ++++ +ED ++R+W TCLN ER W + +
Sbjct: 224 TLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYRLETCLNYGF---ERVWTISSM 280
Query: 290 PTLNLFAAGHDAGMVVFKFERERPAYT--VHNNVMYYVKERFLHRLDLTNSKDSVVMQLR 347
N A G+D G ++ K RE PA + V + + + K + +++L D +++
Sbjct: 281 RGTNNVALGYDEGSIIIKVGREEPAMSMDVVGSKIIWAKHSEMQQVNLKTIADGT--EIK 338
Query: 348 GGGRIPAHSISYNATEHSILVTTRNAN 374
G R+P + A E N N
Sbjct: 339 DGERLPVATKDMGACEIYPQTIAHNPN 365
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 46/208 (22%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
M+ FE V+ F ++ WIL+ + I++++Y + F+ H +R I H
Sbjct: 49 MVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCI---------------------------------- 86
QP+ ++ DD IK+WN+++
Sbjct: 109 PTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVK 168
Query: 87 ----------FTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
FTL GH + ++H + P+++S +DD+ ++IW++Q++ C+ L GH
Sbjct: 169 VWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ FHP IV++ S D T+R+W
Sbjct: 229 AQNISAVCFHPELPIVLTGSEDGTVRIW 256
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ AL D + LAL+ G+++IAL+ AR E+ W +L A + N +V+
Sbjct: 631 GFKSQALQVSTDADHKFDLALQIGDLEIALKLARESENSQKWSQLADVASSKNNMSLVKE 690
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLK 537
C Q+ + L L +G+ + L+
Sbjct: 691 CMQKANDLSGLLLLSTASGDAQLLE 715
>sp|Q20168|COPB2_CAEEL Probable coatomer subunit beta' OS=Caenorhabditis elegans
GN=F38E11.5 PE=3 SV=3
Length = 1000
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 168/373 (45%), Gaps = 60/373 (16%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP W+L++L+NG + +W+Y TL++ F+ + PVR F ++
Sbjct: 10 KLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD I+V+NY + + H DY+R+ H P+++S+SDD +++W+W
Sbjct: 70 SWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWD 129
Query: 124 SRNCI-CVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG------ 175
++ + GH HYVM +P D + +ASLD+T++VW G
Sbjct: 130 NKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVN 189
Query: 176 --------------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
GADD +K+W + V GH NVS V FHP+ +I++
Sbjct: 190 CVDYYHGGEKPYIISGADDHLVKIWDYQNKTC--VQTLDGHAQNVSSVCFHPELPLIITG 247
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 281
+ED ++RLW NT+R E T E
Sbjct: 248 SEDSTVRLWHA------NTYRLE-----------------------------TTLNYGLE 272
Query: 282 RFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNN-VMYYVKERFLHRLDLTNSKD 340
R W + A N A G+D G V K RE PA ++ ++ + + K + + +L
Sbjct: 273 RVWCIQAQKGANTIAIGYDEGSVTLKLGREEPAVSMDSSGKILWAKHSEIQQANLKTIST 332
Query: 341 SVVMQLRGGGRIP 353
++ G R+P
Sbjct: 333 EESEAIQDGERLP 345
>sp|O42937|COPB2_SCHPO Probable coatomer subunit beta' OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec27 PE=3 SV=2
Length = 796
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 59/339 (17%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K + + RVK + FHP PW+++S +NG + +W+Y TL+ FD ++ P+R F ++
Sbjct: 9 KLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARK 68
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
FV G DD++++V+NY + + H DYIR H P++L++SDD TI+ +NW
Sbjct: 69 NWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWD 128
Query: 124 -SRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDIS-------------GLR 168
S C+ GH+ YVM +P D + S+ LD T++VW G+
Sbjct: 129 MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVN 188
Query: 169 KKNVAPG-------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
N P DD IK+W V I GH NNVS FH K +I+S
Sbjct: 189 YVNYYPAGDKPYLITAGDDNLIKVWDYQTKAC--VRILEGHTNNVSFAFFHSKFPIIISG 246
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 281
+ED ++++W + + ++ +R W I N ++
Sbjct: 247 SEDGTVKIWHTLSYSLIKSYNFSLDRAW--CIAQNKDN---------------------- 282
Query: 282 RFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNN 320
L G D G++ F R+ P+ T+ ++
Sbjct: 283 -----------GLVTVGFDNGLITFSLGRDEPSVTMDSS 310
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GY E AL D R LAL+ +DIA + A+ L+D W LG AAL + + +
Sbjct: 629 GYKEAALELSGDSVQRFELALDAQRLDIASQIAQELDDPLKWRSLGDAALNAWDFVLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C+++ K++ L LY T N E LK++ ++ +
Sbjct: 689 CFEKGKDYGSLVLLYTATNNHEGLKELSQLTK 720
>sp|Q54YD8|COPB2_DICDI Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3
SV=1
Length = 1005
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 160/337 (47%), Gaps = 60/337 (17%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQ 62
K T+S RVK + HP PWIL+SL++G + +W+Y +++ F+ PVR F +
Sbjct: 10 KLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAK 69
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ V+G DD I+V+NY + I + H DYIR H P+ILS+SDD I++W++
Sbjct: 70 KQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDY 129
Query: 123 QSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDIS-------------GL 167
+ + V GH+HYVM ++P D + +ASLD+T++VW I+ G+
Sbjct: 130 EKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGI 189
Query: 168 RKKNVAPG-------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVS 220
G GADD+ +K+W V GH NNVS V +HP+ +I+S
Sbjct: 190 NSVEYFSGGEKPYLISGADDKLVKIWDYQSKTC--VQTLEGHSNNVSVVCYHPELPLILS 247
Query: 221 NAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+ED +++LW + T+R E+ + V W M F R
Sbjct: 248 GSEDGTVKLWHSS------TYRLERTLNYGMGFV----------WSM-------NFLRGS 284
Query: 281 ERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTV 317
N G+D G VV K + +P ++
Sbjct: 285 ------------NFIGLGYDDGTVVLKIGKNKPPVSM 309
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH 60
+ FE + ++ + HP P+ILSS + I+LWDY + + F+ H V I ++
Sbjct: 93 IKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWN 152
Query: 61 NQQP-IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
+ F + D +KVW+ FTL GH I + F E P+++S +DD+ +
Sbjct: 153 PKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLV 212
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM 176
+IW++QS+ C+ L GH++ V +HP +++S S D T+++W S R ++ + GM
Sbjct: 213 KIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTYRLERTLNYGM 272
Query: 177 GADDRQIKLWRMN 189
G +W MN
Sbjct: 273 GF------VWSMN 279
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 434 LWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSV 493
L ++ D++ S GY E AL D R LA++ N+D+A E A + ++
Sbjct: 612 LPKIPQDQRNSIAHFLESQGYKEKALEVSTDLDHRFELAIQLENLDVAHEIALKSDSETK 671
Query: 494 WERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
++ LG AL G ++ E C ++ ++ L LY TG++E +K + K++E
Sbjct: 672 FKHLGDLALSIGEIKLAENCLKKAEDLPGLLLLYTSTGDIEGMKMLAKLSE 722
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWN 79
++P+++S + ++++WDY+ T ++ + H V +C+H + P+ +SG +D +K+W+
Sbjct: 199 EKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWH 258
Query: 80 YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVM 139
+ TL + ++ + F +I DD T+ + +++ + + G V+
Sbjct: 259 SSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKIGKNKPPVSMDQGGK--VI 316
Query: 140 CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 173
A+ + +S++L+Q ++ + L+ K++
Sbjct: 317 YAKHNEIRISNISSTLEQEVQDGEKLSLQSKDLG 350
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 158/346 (45%), Gaps = 28/346 (8%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L + ++ V+ L F P + + + +++LWD L H V + F
Sbjct: 1109 LYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSP 1168
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
SG D +++W+ KC++ L GH ++ + F+ + + S S DQT+R+W
Sbjct: 1169 DGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWE 1228
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG------ 175
S C+C GH +V F+P ++ S S D+T+R+WDIS + + G
Sbjct: 1229 INSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVN 1288
Query: 176 ------------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAE 223
G+ D+ ++LW ++ SK + F+GH + VS V F P ++ S ++
Sbjct: 1289 SVAFNPDGSMLASGSGDQTVRLWEISSSKC--LHTFQGHTSWVSSVTFSPDGTMLASGSD 1346
Query: 224 DKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTF 276
D+++RLW ++ CL TF S ++ S + D+++RLW ++ CL T
Sbjct: 1347 DQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTL 1406
Query: 277 RREQERFWVLVAHPTLNLFAAGHDAGMV-VFKFERERPAYTVHNNV 321
+ +V P L A+G D V ++ YT+H ++
Sbjct: 1407 QGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHI 1452
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 27/322 (8%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L F+ ++RV+ + F P + S + ++LWD L F H G V + F+
Sbjct: 941 LKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNL 1000
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ +G D +++W+ +C + GH +R+ F + + S SDDQT+R+W+
Sbjct: 1001 DGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWD 1060
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG--------------- 166
S NC+ L GH V F P ++ S DQ +R+WDIS
Sbjct: 1061 ISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVR 1120
Query: 167 ---LRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAE 223
V G+ D+ ++LW ++ K + +GH N V+ V F P + S +
Sbjct: 1121 FLVFSPNGVTLANGSSDQIVRLWDISSKKC--LYTLQGHTNWVNAVAFSPDGATLASGSG 1178
Query: 224 DKSIRLWDMTKRTCLNTFRREQERFWSEV-------IVSNAEDKSIRLWDMTKRTCLNTF 276
D+++RLWD++ CL + S V + S + D+++RLW++ CL TF
Sbjct: 1179 DQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTF 1238
Query: 277 RREQERFWVLVAHPTLNLFAAG 298
+ +V +P ++ A+G
Sbjct: 1239 QGHTSWVNSVVFNPDGSMLASG 1260
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 27/294 (9%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F+P + S + ++LW+ + L F H V + F+ + SG
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSS 1262
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +++W+ KC+ T GH +++ + F+ + + S S DQT+R+W S C+
Sbjct: 1263 DKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTF 1322
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG------------------LRKKNVA 173
GH +V F P ++ S S DQT+R+W IS
Sbjct: 1323 QGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAI 1382
Query: 174 PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
G+ D+ ++LW ++ K + +GH N V ++F P ++ S ++D+++RLW+++
Sbjct: 1383 LASGSGDQTVRLWSISSGKC--LYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNIS 1440
Query: 234 KRTCL-------NTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
CL N+ R ++ S ++D++I+LWD+ C+ T + E+
Sbjct: 1441 SGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKSEK 1494
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 129/295 (43%), Gaps = 31/295 (10%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
V ++F P + G+++ W+ L H V + F + SG
Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASG 924
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
DD +++W+ +C+ T GH +R+ F + S S DQT+R+W+ S C+
Sbjct: 925 SDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLY 984
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG------------------LRKKN 171
+ GH +V F+ ++ + S DQT+R+WDIS
Sbjct: 985 IFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDG 1044
Query: 172 VAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
G+DD+ ++LW ++ + +GH + V V+F P ++ S +D+ +RLWD
Sbjct: 1045 AMLASGSDDQTVRLWDISSGNC--LYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWD 1102
Query: 232 MTKRTCLNTFRREQERFWSEVIV---------SNAEDKSIRLWDMTKRTCLNTFR 277
++ CL T + W +V + + D+ +RLWD++ + CL T +
Sbjct: 1103 ISSGNCLYTLQGYTS--WVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQ 1155
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 138/314 (43%), Gaps = 31/314 (9%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F + S + ++LWD L+ F H VR + F + SG
Sbjct: 909 VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSS 968
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +++W+ +C++ GH ++ + F+ + + + S DQT+R+W+ S C +
Sbjct: 969 DQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIF 1028
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG-------------LRKKNVAP---- 174
GH V F ++ S S DQT+R+WDIS +R +P
Sbjct: 1029 QGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAM 1088
Query: 175 -GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
G DD+ ++LW ++ + +G+ + V ++F P + + + D+ +RLWD++
Sbjct: 1089 LASGGDDQIVRLWDISSGNC--LYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDIS 1146
Query: 234 KRTCLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
+ CL T + W + S + D+++RLWD++ CL +
Sbjct: 1147 SKKCLYTLQGHTN--WVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVN 1204
Query: 285 VLVAHPTLNLFAAG 298
+V +P + A+G
Sbjct: 1205 SVVFNPDGSTLASG 1218
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 26/244 (10%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L F+ + V ++F+P + S + ++LW+ + L F H V + F
Sbjct: 1277 LHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSP 1336
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ SG DD +++W+ +C++T LGH +++ + F + + S S DQT+R+W+
Sbjct: 1337 DGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWS 1396
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
S C+ L GHN++V F P ++ S S DQT+R+W+IS
Sbjct: 1397 ISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGEC------------ 1444
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
+ GH N+V V F ++ S ++D++I+LWD+ C+ T
Sbjct: 1445 --------------LYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTL 1490
Query: 242 RREQ 245
+ E+
Sbjct: 1491 KSEK 1494
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 133/298 (44%), Gaps = 28/298 (9%)
Query: 52 GPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSA 111
G V + F +F +G ++ W K + T GH ++ + F + + S
Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASG 924
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 171
SDDQT+R+W+ S C+ GH V F P ++ S S DQT+R+WDIS
Sbjct: 925 SDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLY 984
Query: 172 VAPG------------------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ G G+ D+ ++LW ++ S+ + IF+GH + V V+F
Sbjct: 985 IFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFY--IFQGHTSCVRSVVFSS 1042
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV-------IVSNAEDKSIRLWD 266
++ S ++D+++RLWD++ CL T + S V + S +D+ +RLWD
Sbjct: 1043 DGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWD 1102
Query: 267 MTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMV-VFKFERERPAYTVHNNVMY 323
++ CL T + LV P A G +V ++ ++ YT+ + +
Sbjct: 1103 ISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNW 1160
Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P + S + ++LW L H V I F + SG D
Sbjct: 1371 VGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSD 1430
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +++WN +C++TL GH++ +R+ F + + S SDD+TI++W+ ++ CI L
Sbjct: 1431 DQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTL 1490
Query: 132 TGHNHY 137
Y
Sbjct: 1491 KSEKIY 1496
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 137/311 (44%), Gaps = 27/311 (8%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++F P + SS + I+LWD L H G VR + F SG
Sbjct: 771 VRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSG 830
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+WNY +C+ T +GH + + + + + ++S S D+TI++W+ Q+ CI L
Sbjct: 831 DRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTL 890
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------------------GLRKKNVA 173
GH + V F P + SLDQ++R+W+
Sbjct: 891 HGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQI 950
Query: 174 PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
G++D+ +KLW K + GH + + + F P S+ + S + D S+RLW+++
Sbjct: 951 LASGSNDKTVKLWDWQTGKY--ISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNIS 1008
Query: 234 KRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
C + ++ ++I + + D +++LW+++ CL T ++ +
Sbjct: 1009 TGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGM 1068
Query: 287 VAHPTLNLFAA 297
P L A+
Sbjct: 1069 AWSPDGQLLAS 1079
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 144/321 (44%), Gaps = 27/321 (8%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F + +F P+ + + + +++W+ + LL H VR + F
Sbjct: 638 FTETLGNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGE 697
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
I S G D +K+W+ + CI TL GH + + FH + + SAS D+TI++W+ Q
Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQD 757
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKKNVAPG------ 175
C+ LTGH +V C F P + + S++ D TI++WD+S LR G
Sbjct: 758 GTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVA 817
Query: 176 ---------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
G+ DR IK+W + + + + GH N+V + + P S+++VS + D++
Sbjct: 818 FSADGQTLASGSGDRTIKIWNYHTGEC--LKTYIGHTNSVYSIAYSPDSKILVSGSGDRT 875
Query: 227 IRLWDMTKRTCLNTFRREQERFWSEVIVSNAE-------DKSIRLWDMTKRTCLNTFRRE 279
I+LWD C+ T S + + D+S+RLW+ CL +
Sbjct: 876 IKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGN 935
Query: 280 QERFWVLVAHPTLNLFAAGHD 300
+ + P + A+G +
Sbjct: 936 TDWALPVAFSPDRQILASGSN 956
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 33/315 (10%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V ++FHP + S+ + I+LWD + T L+ H VR + F S
Sbjct: 729 VFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAA 788
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D+ IK+W+ Q KC+ TL H ++R+ F + + S S D+TI+IWN+ + C+
Sbjct: 789 DHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTY 848
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD---------ISGLRKKNVAPGMGAD--- 179
GH + V + P I+VS S D+TI++WD + G + + D
Sbjct: 849 IGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQT 908
Query: 180 ------DRQIKLWRMNDS---KAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
D+ ++LW KAW G+ + V F P +++ S + DK+++LW
Sbjct: 909 LACVSLDQSVRLWNCRTGQCLKAW-----YGNTDWALPVAFSPDRQILASGSNDKTVKLW 963
Query: 231 DMTKRTCLNTFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF 283
D +++ + + S+ + S + D S+RLW+++ C +
Sbjct: 964 DWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWV 1023
Query: 284 WVLVAHPTLNLFAAG 298
+ +V HP + A G
Sbjct: 1024 YAVVFHPQGKIIATG 1038
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 148/320 (46%), Gaps = 27/320 (8%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L ++ + V+ ++F + S + I++W+Y L+ + H V I +
Sbjct: 803 LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP 862
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
I VSG D IK+W+ + CI TL GH + + + F + + S DQ++R+WN
Sbjct: 863 DSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWN 922
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD------ISGLRKKN---- 171
++ C+ G+ + + F P I+ S S D+T+++WD IS L
Sbjct: 923 CRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIY 982
Query: 172 ---VAP-----GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAE 223
+P + D ++LW ++ + ++ I H + V V+FHP+ ++I + +
Sbjct: 983 GIAFSPDSQTLASASTDSSVRLWNISTGQCFQ--ILLEHTDWVYAVVFHPQGKIIATGSA 1040
Query: 224 DKSIRLWDMTKRTCLNTFRREQERF----WS---EVIVSNAEDKSIRLWDMTKRTCLNTF 276
D +++LW+++ CL T ++ WS +++ S + D+S+RLWD C+
Sbjct: 1041 DCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGIL 1100
Query: 277 RREQERFWVLVAHPTLNLFA 296
R R + + P + A
Sbjct: 1101 RGHSNRVYSAIFSPNGEIIA 1120
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 20/259 (7%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
++ E + + G++F P + S+ + ++LW+ + EH V + FH
Sbjct: 971 ISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHP 1030
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
Q I +G D +K+WN +C+ TL H D I + + + SAS DQ++R+W+
Sbjct: 1031 QGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWD 1090
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG------ 175
+ C+ +L GH++ V A F P +I+ + S DQT+++WD + G
Sbjct: 1091 CCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVF 1150
Query: 176 ------------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAE 223
+ D+ +++W +N K + I GH + VS V F P EV+ S ++
Sbjct: 1151 DIAFSPDGKILASASHDQTVRIWDVNTGKCHHICI--GHTHLVSSVAFSPDGEVVASGSQ 1208
Query: 224 DKSIRLWDMTKRTCLNTFR 242
D+++R+W++ CL R
Sbjct: 1209 DQTVRIWNVKTGECLQILR 1227
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 27/288 (9%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
++F P R + S ++ ++LWD++ + + H + GI F S D
Sbjct: 942 VAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSS 1001
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
+++WN +C LL H D++ FH + I + S D T+++WN + C+ L+ H
Sbjct: 1002 VRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEH 1061
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG----------------- 177
+ ++ + P ++ SAS DQ++R+WD R + G
Sbjct: 1062 SDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIAT 1121
Query: 178 -ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
+ D+ +K+W K + GH N V + F P +++ S + D+++R+WD+
Sbjct: 1122 CSTDQTVKIWDWQQGKC--LKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGK 1179
Query: 237 CLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFR 277
C + S EV+ S ++D+++R+W++ CL R
Sbjct: 1180 CHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQILR 1227
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 31/282 (10%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + F P + S + ++LW R ++ HE V + FH S
Sbjct: 687 VRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASG 746
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ + C+ TL GH D++R F + + S++ D TI++W+ C+ L
Sbjct: 747 DKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTL 806
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-------------ISGLRKKNVAPG--- 175
H +V F + S S D+TI++W+ + + +P
Sbjct: 807 KSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKI 866
Query: 176 --MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
G+ DR IKLW + GH N V V F P + + + D+S+RLW+
Sbjct: 867 LVSGSGDRTIKLWDCQTHIC--IKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCR 924
Query: 234 KRTCLNTFRREQERFWS---------EVIVSNAEDKSIRLWD 266
CL + + W+ +++ S + DK+++LWD
Sbjct: 925 TGQCLKAWYGNTD--WALPVAFSPDRQILASGSNDKTVKLWD 964
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 33/177 (18%)
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-------------------K 169
CV T ++ A F P ++ + D +RVW++ +
Sbjct: 636 CVFTETLGNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPD 695
Query: 170 KNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRL 229
+ GAD+ +KLW + D + GH + V V FHP E + S + DK+I+L
Sbjct: 696 GEILASCGADE-NVKLWSVRDGVC--IKTLTGHEHEVFSVAFHPDGETLASASGDKTIKL 752
Query: 230 WDMTKRTCLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
WD+ TCL T + W + S+A D +I+LWD+++ CL T +
Sbjct: 753 WDIQDGTCLQTLTGHTD--WVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLK 807
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S RV F P I + + +++WD++ L+ H V I F I S
Sbjct: 1104 SNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILAS 1163
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D +++W+ KC +GH + + F + + S S DQT+RIWN ++ C+
Sbjct: 1164 ASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECL 1223
Query: 129 CVLTGHNHY 137
+L Y
Sbjct: 1224 QILRAKRLY 1232
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 133/327 (40%), Gaps = 31/327 (9%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
E + V ++F + S + I++WD T + + H G V + F +
Sbjct: 837 LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRE 896
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
SG DD IK+W+ C TL GH +++ F + + S SDD TI+IW+ S
Sbjct: 897 RVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAAS 956
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG--------- 175
C L GH V+ F P V S S D+TI++WD + G
Sbjct: 957 GTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVA 1016
Query: 176 ---------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
G+DD+ IK+W GH V V+F P + + S ++D +
Sbjct: 1017 FSPDGQRVASGSDDKTIKIWDTASGTC--TQTLEGHGGWVQSVVFSPDGQRVASGSDDHT 1074
Query: 227 IRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRRE 279
I++WD TC T + WS + + S + D +I++WD TC T E
Sbjct: 1075 IKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL--E 1132
Query: 280 QERFWV--LVAHPTLNLFAAGHDAGMV 304
WV + P A+G G +
Sbjct: 1133 GHGGWVHSVAFSPDGQRVASGSIDGTI 1159
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 119/299 (39%), Gaps = 31/299 (10%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
E + V ++F P + S + I++WD T + + H G V + F
Sbjct: 963 LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQ 1022
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
SG DD IK+W+ C TL GH ++++ F + + S SDD TI+IW+ S
Sbjct: 1023 RVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVS 1082
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG--------- 175
C L GH V F P V S S+D TI++WD + G
Sbjct: 1083 GTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVA 1142
Query: 176 ---------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
G+ D IK+W GH V V F P + + S + DK+
Sbjct: 1143 FSPDGQRVASGSIDGTIKIWDAASGTC--TQTLEGHGGWVQSVAFSPDGQRVASGSSDKT 1200
Query: 227 IRLWDMTKRTCLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTF 276
I++WD TC T E W + + S + D +I++WD TC T
Sbjct: 1201 IKIWDTASGTCTQTL--EGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCTQTL 1257
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 124/308 (40%), Gaps = 33/308 (10%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
E V ++F P R + S + I++WD T + + H G V+ + F
Sbjct: 879 LEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQ 938
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
SG DD+ IK+W+ C TL GH + + F + + S S D+TI+IW+ S
Sbjct: 939 RVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTAS 998
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG--------- 175
C L GH V F P V S S D+TI++WD + G
Sbjct: 999 GTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVV 1058
Query: 176 ---------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
G+DD IK+W GH ++V V F P + + S + D +
Sbjct: 1059 FSPDGQRVASGSDDHTIKIWDAVSGTC--TQTLEGHGDSVWSVAFSPDGQRVASGSIDGT 1116
Query: 227 IRLWDMTKRTCLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
I++WD TC T E W + + S + D +I++WD TC T
Sbjct: 1117 IKIWDAASGTCTQTL--EGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL- 1173
Query: 278 REQERFWV 285
E WV
Sbjct: 1174 -EGHGGWV 1180
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 117/300 (39%), Gaps = 31/300 (10%)
Query: 32 VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLG 91
I + + N + + H V + F SG DD IK+W+ TL G
Sbjct: 822 TISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEG 881
Query: 92 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 151
H + + F + + S SDD+TI+IW+ S C L GH V F P V
Sbjct: 882 HGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA 941
Query: 152 SASLDQTIRVWDISGLRKKNVAPG------------------MGADDRQIKLWRMNDSKA 193
S S D TI++WD + G G+ D+ IK+W
Sbjct: 942 SGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTC 1001
Query: 194 WEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVI 253
GH +V V F P + + S ++DK+I++WD TC T E W + +
Sbjct: 1002 --TQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTL--EGHGGWVQSV 1057
Query: 254 V---------SNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMV 304
V S ++D +I++WD TC T + W + P A+G G +
Sbjct: 1058 VFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTI 1117
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 83/230 (36%), Gaps = 33/230 (14%)
Query: 96 IRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 155
I+ F E WI TI + + C L GH V+ F V S S
Sbjct: 808 IKKIFKKEEPGWI------STISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSD 861
Query: 156 DQTIRVWDISGLRKKNVAPG------------------MGADDRQIKLWRMNDSKAWEVD 197
D+TI++WD + G G+DD+ IK+W
Sbjct: 862 DKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTC--TQ 919
Query: 198 IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS------- 250
GH V V F P + + S ++D +I++WD TC T S
Sbjct: 920 TLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDG 979
Query: 251 EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHD 300
+ + S + DK+I++WD TC T W + P A+G D
Sbjct: 980 QRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD 1029
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 40/265 (15%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H P+ + FH +FVS +D IKVW+Y+ + TL GH D ++ F ++
Sbjct: 121 HRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFLA 180
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG--- 166
S S D +++W++ CI LTGH+H V F P+ D +VSAS D+TI++W++S
Sbjct: 181 SCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYC 240
Query: 167 ----------LRKKNVAP-----GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+R +P ++D I++W + +S+ +V + RGH + V C+ +
Sbjct: 241 TKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSV-ESRECQV-VLRGHEHVVECIAW 298
Query: 212 --HPK-----------SEVIVSNAEDKSIRLWDMTKRTCL-------NTFRREQERFWSE 251
HP+ S ++VS + D++IR WD+ CL N R+
Sbjct: 299 ASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQLVFHPHGR 358
Query: 252 VIVSNAEDKSIRLWDMTKRTCLNTF 276
+++S ++DK+IR+WD+ R C T
Sbjct: 359 LLLSASDDKTIRVWDLKNRRCHKTL 383
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++F P ++ S + ++LWD+ + ++ H+ V + F VS
Sbjct: 167 VQDVAFDPSGKFLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASR 226
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W C T +GH ++IR+ E + S S+D TIRIW+ +SR C VL
Sbjct: 227 DKTIKMWEVSTGYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVL 286
Query: 132 TGHNHYVMCAQF--HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMN 189
GH H V C + HP + + +S++ ++ + +SG R DR I+ W +N
Sbjct: 287 RGHEHVVECIAWASHPQNLNSLPSSMNSSLLL--VSGSR-----------DRTIRFWDVN 333
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 249
V I GH N V ++FHP +++S ++DK+IR+WD+ R C T
Sbjct: 334 IGICLFVLI--GHDNWVRQLVFHPHGRLLLSASDDKTIRVWDLKNRRCHKTLNAHSHFVT 391
Query: 250 S-------EVIVSNAEDKSIRLWD 266
S ++ + D++I +WD
Sbjct: 392 SLDVNRLAPYAITGSVDQTIHIWD 415
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 133/282 (47%), Gaps = 20/282 (7%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + + FHP +LS+ + VI++WD+ H V+ I F +Q + S
Sbjct: 109 ASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDSQGKLLASC 168
Query: 70 GDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D IK+W+++Q C+ T+LGH + + F ++LSAS DQTI++W + C+
Sbjct: 169 SADLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMWEVATGYCV 228
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM 188
+GH ++ + H +I S S+D +IR+W I+ ++ + A D +
Sbjct: 229 KTYSGHREWIRMVRVHMDGNIFASCSIDHSIRIWSINS---RDCKAELRAHDHTV----- 280
Query: 189 NDSKAWEVDIFRGHYNNVSCV---LFHPKSEVIVSNAEDKSIRLWDMTKRTCL------- 238
+ AW DI H N + H + + S + DK+IR+WD+ CL
Sbjct: 281 -ECIAWAPDISTTHINEAAGSDNKKGHHQGPFLASGSRDKTIRVWDVGVGLCLFVLTGHD 339
Query: 239 NTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
N R + +VS ++DK+IR+WD+ + + T Q
Sbjct: 340 NWVRELTFHPGGKYLVSASDDKTIRVWDLRNKRFMKTLYAHQ 381
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 48/241 (19%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V ++F P ++LS+ + I++W+ ++ + H +R + H IF S
Sbjct: 196 VSSVAFVPAGDYVLSASRDQTIKMWEVATGYCVKTYSGHREWIRMVRVHMDGNIFASCSI 255
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDY----------IRTTFF-----------HHEYPWILS 110
D+ I++W+ R C L H D+ I TT HH+ P++ S
Sbjct: 256 DHSIRIWSINSRDCKAELRAH-DHTVECIAWAPDISTTHINEAAGSDNKKGHHQGPFLAS 314
Query: 111 ASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 170
S D+TIR+W+ C+ VLTGH+++V FHP +VSAS D+TIRVWD LR K
Sbjct: 315 GSRDKTIRVWDVGVGLCLFVLTGHDNWVRELTFHPGGKYLVSASDDKTIRVWD---LRNK 371
Query: 171 NVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+ A H + + V FH K ++S + D ++++W
Sbjct: 372 RFMKTLYA-----------------------HQHFCTSVDFHKKLPYVISGSVDNTVKVW 408
Query: 231 D 231
+
Sbjct: 409 E 409
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 34/175 (19%)
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
L+GH + FHPT +++SAS D I++WD G +R +K
Sbjct: 104 LSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFE----------TGEYERSLK------ 147
Query: 191 SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR-TCLNTFRREQERFW 249
GH ++V + F + +++ S + D SI+LWD + C+ T
Sbjct: 148 ----------GHTSSVQDIAFDSQGKLLASCSADLSIKLWDFQQSYDCVKTMLGHDHNVS 197
Query: 250 S-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
S + ++S + D++I++W++ C+ T+ +E ++ H N+FA+
Sbjct: 198 SVAFVPAGDYVLSASRDQTIKMWEVATGYCVKTYSGHREWIRMVRVHMDGNIFAS 252
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
++F P + + +I +WD L + H VR + F + SG DD
Sbjct: 465 VAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDAT 524
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
+++W+ + GH Y+ F + + S S D T R+WN + VL GH
Sbjct: 525 VRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGH 584
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV--APG---------------MG 177
YV F P +V S S D TIR+WD++ ++++V AP +
Sbjct: 585 TDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVH 644
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
D + LW + +A + F GH + V V F P ++ S ++D++IRLWD+ +
Sbjct: 645 GSDSTVHLWDVASGEA--LHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEE 702
Query: 238 LNTFRREQERFWS-------EVIVSNAEDKSIRLWDM 267
T E S + S +ED +IR+W +
Sbjct: 703 HTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPI 739
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V ++F P + S +G I+LWD + V + F + V G
Sbjct: 588 VYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHG-S 646
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D + +W+ + + T GH D++R F + + S SDD+TIR+W+ ++ L
Sbjct: 647 DSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTL 706
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
GH V FHP + SAS D TIR+W I+
Sbjct: 707 EGHTEPVHSVAFHPEGTTLASASEDGTIRIWPIA 740
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 27/228 (11%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
FE + V ++F P + S +G +LW+ T H V + F
Sbjct: 539 FEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGS 598
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ SG D I++W+ K L + + + F + ++ S D T+ +W+ S
Sbjct: 599 MVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVAS 657
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIK 184
+ GH +V F P ++ S S D+TIR+WD++ +
Sbjct: 658 GEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTT------------ 705
Query: 185 LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
GH V V FHP+ + S +ED +IR+W +
Sbjct: 706 --------------LEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPI 739
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L FE + V+ ++F P + S + I+LWD + H PV + FH
Sbjct: 661 LHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHP 720
Query: 62 QQPIFVSGGDDYKIKVW 78
+ S +D I++W
Sbjct: 721 EGTTLASASEDGTIRIW 737
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 158/395 (40%), Gaps = 79/395 (20%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L SA V + F P I + + ++LW + LL+ + H+ V + F
Sbjct: 1189 LLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFS 1248
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
S D IK+W K + TL GH D + F + I SAS D TI++W
Sbjct: 1249 PDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLW 1308
Query: 121 NWQSRNCICV--LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD--------------- 163
N R+ I + TGH+ V F P +I+ SASLD TIR+W
Sbjct: 1309 N---RHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSG 1365
Query: 164 ---ISGLRKKNVAPGMGAD----------------------------------------D 180
+S L ++ GAD D
Sbjct: 1366 VYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDLIASANAD 1425
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ +K+WR+ D KA + I GH N V+ V F P + + S + D +++LW+++ T
Sbjct: 1426 KTVKIWRVRDGKALKTLI--GHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKT 1483
Query: 241 FR-REQERFW------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLN 293
+ E FW ++I S + DK+IRLWD + + + + + +P +
Sbjct: 1484 LKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGS 1543
Query: 294 LFAAGHDAGMVVFKFERERPA-----YTVHNNVMY 323
+ A+ V K R ++ H+NV+Y
Sbjct: 1544 MLASTSADKTV--KLWRSHDGHLLHTFSGHSNVVY 1576
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 117/289 (40%), Gaps = 27/289 (9%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V +SF P I S + I+LW TLL+ HE V + F S
Sbjct: 1116 VYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASS 1175
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D+ IK+W+ + + TL GH + T F + I + S+D+T+++W+ Q + L
Sbjct: 1176 DHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTL 1235
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------------------GLRKKNVA 173
GH +V F P + SAS D+TI++W I+ A
Sbjct: 1236 NGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKA 1295
Query: 174 PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
+ D IKLW + E++ F GH V V F P S +I S + D +IRLW
Sbjct: 1296 IASASRDNTIKLW---NRHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRP 1352
Query: 234 KRTCLNTFRREQERFW------SEVIVSNAEDKSIRLWDMTKRTCLNTF 276
+ L + +I + D +I+LW + L T
Sbjct: 1353 LISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTL 1401
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 33/294 (11%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V +SF I ++ +G IQLW + +LL+ ++ + GI F Q + S
Sbjct: 1366 VYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKA-IYGISFTPQGDLIASANA 1424
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W + K + TL+GH + + F + + SAS D T+++WN L
Sbjct: 1425 DKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTL 1484
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISG------------LRKKNVAP---- 174
GH V F P I+ SAS D+TIR+WD SG + N P
Sbjct: 1485 KGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSM 1544
Query: 175 -GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
+ D+ +KLWR +D + F GH N V F P I S +EDK++++W +
Sbjct: 1545 LASTSADKTVKLWRSHDGHL--LHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQID 1602
Query: 234 KRTCLNTFRREQERFWSEV-------IVSNAEDKSIRLW----DMTKRTCLNTF 276
L T + Q S + ++S + D + ++W K + +NT
Sbjct: 1603 GH-LLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRFDSQQAKTSQMNTL 1655
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 134/326 (41%), Gaps = 29/326 (8%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I S + I+LW R L + HE V + F SGG D IK+W
Sbjct: 1087 IASGSLDKTIKLWS-RDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDG 1145
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+ T+ GH + +F + + SAS D +I++W+ S + LTGH+ V+ +F
Sbjct: 1146 TLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRF 1205
Query: 144 HPTDDIVVSASLDQTIRVW---DISGLRKKN----------VAP-----GMGADDRQIKL 185
P + + S D+T+++W D L+ N +P + D+ IKL
Sbjct: 1206 SPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKL 1265
Query: 186 WRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
WR+ D K V +GH ++V V F + I S + D +I+LW+ L TF
Sbjct: 1266 WRIADGKL--VKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNR-HGIELETFTGHS 1322
Query: 246 ERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ S +I S + D +IRLW + L + V H + AG
Sbjct: 1323 GGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAG 1382
Query: 299 HDAGMVVFKFERERPAYTVHNNVMYY 324
D + ++ + T+ N Y
Sbjct: 1383 ADGNIQLWHSQDGSLLKTLPGNKAIY 1408
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 32/223 (14%)
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDD 148
L GH D + + + I S S D+TI++W+ R L GH V F P
Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGR-LFRTLNGHEDAVYSVSFSPDGQ 1126
Query: 149 IVVSASLDQTIRVWD---------ISGLRK-----------KNVAPGMGADDRQIKLWRM 188
+ S D+TI++W I+G + KN+A + D IKLW
Sbjct: 1127 TIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLAS--ASSDHSIKLWDT 1184
Query: 189 NDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF 248
+ + GH V V F P + I + +EDK+++LW L T Q+
Sbjct: 1185 TSGQL--LMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWV 1242
Query: 249 WS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
S + + S + DK+I+LW + + T + + W
Sbjct: 1243 NSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVW 1285
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 73/179 (40%), Gaps = 28/179 (15%)
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG--LRKKN----------VAP---- 174
L GH V+ + S SLD+TI++W G R N +P
Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSPDGQT 1127
Query: 175 -GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
G D+ IKLW+ +D + GH V+ V F P + + S + D SI+LWD T
Sbjct: 1128 IASGGSDKTIKLWQTSDGTL--LKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTT 1185
Query: 234 KRTCLNTFRREQE-----RFW--SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWV 285
L T RF + I + +EDK+++LW L T Q+ WV
Sbjct: 1186 SGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQD--WV 1242
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++++ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVW---------------------------------D 163
+V + + ++ S S DQT+RVW D
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISD 295
Query: 164 ISGLR-KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
+G KK+ PG G+ D+ IK+W ++ + GH N V V FHP + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMC--LMTLVGHDNWVRGVQFHPGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK+IR+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTIRIWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 47/294 (15%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + V+ +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTF-------RRE 244
P+S ++S + DK+I++WD++ CL T R
Sbjct: 285 APESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGV 344
Query: 245 QERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
Q + I+S A+DK+IR+WD + C+ T + L H T G
Sbjct: 345 QFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + +++AS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTLRVWDFKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDD--------------------IVVSASLDQTIRVWDISG----- 166
H H V C + P ++S S D+TI++WDIS
Sbjct: 273 REHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLM 332
Query: 167 --LRKKNVAPGM-----------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ N G+ ADD+ +++W + + + H + V+ + FH
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRC--MKTLNAHEHFVTSLDFHK 390
Query: 214 KSEVIVSNAEDKSIRLWD 231
+ +V+ + D+++++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F T
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHT 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDD--------------------IVVSASLDQTIRVWDISG----- 166
H H V C + P ++S S D+TI++WD+S
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332
Query: 167 --LRKKNVAPGM-----------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ N G+ ADD+ +++W + + + H + V+ + FH
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHK 390
Query: 214 KSEVIVSNAEDKSIRLWD 231
+ +V+ + D+++++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDD--------------------IVVSASLDQTIRVWDISG----- 166
H H V C + P ++S S D+TI++WD+S
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332
Query: 167 --LRKKNVAPGM-----------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ N G+ ADD+ +++W + + + H + V+ + FH
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHK 390
Query: 214 KSEVIVSNAEDKSIRLWD 231
+ +V+ + D+++++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Felis catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDD--------------------IVVSASLDQTIRVWDISG----- 166
H H V C + P ++S S D+TI++WD+S
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332
Query: 167 --LRKKNVAPGM-----------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ N G+ ADD+ +++W + + + H + V+ + FH
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHK 390
Query: 214 KSEVIVSNAEDKSIRLWD 231
+ +V+ + D+++++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + S D IK
Sbjct: 116 FHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+T+++W + C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFHP +
Sbjct: 296 ATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMC--LMTLVGHDNWVRGVLFHPGGRFV 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERF--------WSEVIVSNAEDKSIRLWD 266
VS A+DK++R+WD + C+ T E F S +V+ + D+++++W+
Sbjct: 354 VSCADDKTLRIWDYKNKRCMKTL-SAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 55/276 (19%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F +
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+T+++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKS--------------------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQE----- 246
P+S ++S + DK+I++WD++ CL T
Sbjct: 285 APESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGV 344
Query: 247 ------RFWSEVIVSNAEDKSIRLWDMTKRTCLNTF 276
RF +VS A+DK++R+WD + C+ T
Sbjct: 345 LFHPGGRF----VVSCADDKTLRIWDYKNKRCMKTL 376
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 42/221 (19%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F T
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQT 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSN---------A 257
S V P + IVS + DK++++W++ C+ TF +E W ++ N +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE--WVRMVRPNQDGTLLASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQERFWVL-----VAHPTLN 293
D+++R+W + + C R + + AHPT++
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTIS 294
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDD--------------------IVVSASLDQTIRVWDISG----- 166
H H V C + P ++S S D+TI++WD+S
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332
Query: 167 --LRKKNVAPGM-----------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ N G+ ADD+ +++W + + + H + V+ + FH
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHK 390
Query: 214 KSEVIVSNAEDKSIRLWD 231
+ +V+ + D+++++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos
taurus GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 134/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D + F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDD--------------------IVVSASLDQTIRVWDISG----- 166
H H V C + P ++S S D+TI++WD+S
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332
Query: 167 --LRKKNVAPGM-----------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ N G+ ADD+ +++W + + + H + V+ + FH
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHK 390
Query: 214 KSEVIVSNAEDKSIRLWD 231
+ +V+ + D+++++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 47/294 (15%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + V+ +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q C+ + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTF-------RRE 244
P+S ++S + DK+I++WD++ CL T R
Sbjct: 285 APESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGV 344
Query: 245 QERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
Q + I+S A+DK+IR+WD + C+ T + L H T G
Sbjct: 345 QFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++++ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +C+ T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVW---------------------------------D 163
+V + + ++ S S DQT+RVW D
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISD 295
Query: 164 ISGLR-KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
+G K++ PG G+ D+ IK+W ++ + GH N V V FHP + I
Sbjct: 296 ATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMC--LMTLVGHDNWVRGVQFHPGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK+IR+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTIRIWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + +++AS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------LRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 134/294 (45%), Gaps = 47/294 (15%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ + F Q + S D IK
Sbjct: 114 FHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSADMTIK 173
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ + I T+ GH + + F +++SAS D+TI++W + C+ TGH
Sbjct: 174 LWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHRE 233
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK----------------------NVAP 174
+V + + ++ S S DQT+RVW ++ K +V+
Sbjct: 234 WVRTVRVNQDGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECIAWAPESCNGHVSE 293
Query: 175 GMGAD--------------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVS 220
MGA+ D+ IK+W ++ + GH N V V++HP + I+S
Sbjct: 294 VMGAEKKGRSGPFLLSGSRDKTIKMWDISTGVC--IMTLVGHDNWVRGVVWHPGGKYIIS 351
Query: 221 NAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
++DK+IR+WD + C T Q F + + +++ + D+++++W+
Sbjct: 352 ASDDKTIRVWDYKNKRCQKTLEAHQ-HFCTSIDFHRSAPYVITGSVDQTVKVWE 404
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
++L GH I FH Y ++SAS+D TI+IW++++ + L GH V F
Sbjct: 100 YSLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQ 159
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD + GH +NV
Sbjct: 160 GKLLASCSADMTIKLWDFQTFEN--------------------------IKTMHGHDHNV 193
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V F P + ++S + DK+I++W++ C+ TF +E W ++ S +
Sbjct: 194 SSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHRE--WVRTVRVNQDGSLLASCS 251
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 252 NDQTVRVWVVANKECKAELREHE 274
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SA+ D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSA+ D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS A DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAAR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDD--------------------IVVSASLDQTIRVWDISG----- 166
H H V C + P ++S S D+TI++WD+S
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332
Query: 167 --LRKKNVAPGM-----------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ N G+ ADD+ +++W + + + H + V+ + FH
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHK 390
Query: 214 KSEVIVSNAEDKSIRLWD 231
+ +V+ + D+++++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 48/295 (16%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H P+ + FH + V+ +D +KVW+Y+ TL GH D ++ F H ++
Sbjct: 105 HRSPITKVLFHPVYSVMVTSSEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHTGKFLA 164
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS---- 165
S+S D TI++W++Q CI L GH+H V F P+ D +VSAS D+TI++W+I+
Sbjct: 165 SSSADMTIKLWDFQGFECIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEIATGYC 224
Query: 166 -------GLRKKNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
G + V P ++D+ I++W + S+ + D+ R H + + + +
Sbjct: 225 VKTFQGHGEWVRRVRPNADGSLIASCSNDQTIRVWVVA-SRECKCDL-RDHDHVIEDLNW 282
Query: 212 HPKSEV---------------------IVSNAEDKSIRLWDMTKRTCL-------NTFRR 243
P+S +VS + DKSI++WD++ CL N R
Sbjct: 283 APESATPVINEAAGVEGGKKAMSPGPFLVSASRDKSIKIWDVSAGVCLVTLVGHDNWVRA 342
Query: 244 EQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ IVS ++DK++R+WD + C T + L H + A G
Sbjct: 343 VMFHPGGKFIVSCSDDKTLRIWDYKNKRCAKTLVAHEHFVTTLDFHKSAPFVATG 397
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 41/264 (15%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP +++S + +++WDY H V+ + F + S D IK
Sbjct: 114 FHPVYSVMVTSSEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHTGKFLASSSADMTIK 173
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI TL GH + + F ++SAS D+TI++W + C+ GH
Sbjct: 174 LWDFQGFECIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEIATGYCVKTFQGHGE 233
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQTIRVW ++ LR
Sbjct: 234 WVRRVRPNADGSLIASCSNDQTIRVWVVASRECKCDLRDHDHVIEDLNWAPESATPVINE 293
Query: 169 -------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEV 217
KK ++PG + D+ IK+W + S + GH N V V+FHP +
Sbjct: 294 AAGVEGGKKAMSPGPFLVSASRDKSIKIWDV--SAGVCLVTLVGHDNWVRAVMFHPGGKF 351
Query: 218 IVSNAEDKSIRLWDMTKRTCLNTF 241
IVS ++DK++R+WD + C T
Sbjct: 352 IVSCSDDKTLRIWDYKNKRCAKTL 375
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 21 RPWILSSL--------HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDD 72
R W+++S H+ VI+ ++ + +E G G + P VS D
Sbjct: 257 RVWVVASRECKCDLRDHDHVIEDLNWAPESATPVINEAAGVEGGKKAMSPGPFLVSASRD 316
Query: 73 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLT 132
IK+W+ C+ TL+GH +++R FH +I+S SDD+T+RIW+++++ C L
Sbjct: 317 KSIKIWDVSAGVCLVTLVGHDNWVRAVMFHPGGKFIVSCSDDKTLRIWDYKNKRCAKTLV 376
Query: 133 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
H H+V FH + V + S+D T++VW+
Sbjct: 377 AHEHFVTTLDFHKSAPFVATGSVDLTLKVWE 407
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 33/198 (16%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+TL GH I FH Y ++++S+D T+++W++++ + L GH V F T
Sbjct: 100 YTLTGHRSPITKVLFHPVYSVMVTSSEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHT 159
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
+ S+S D TI++WD G + GH +NV
Sbjct: 160 GKFLASSSADMTIKLWDFQGFEC--------------------------IRTLHGHDHNV 193
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF-------RREQERFWSEVIVSNAED 259
S + F P + +VS + DK+I++W++ C+ TF RR + +I S + D
Sbjct: 194 SSISFLPSGDHLVSASRDKTIKMWEIATGYCVKTFQGHGEWVRRVRPNADGSLIASCSND 253
Query: 260 KSIRLWDMTKRTCLNTFR 277
++IR+W + R C R
Sbjct: 254 QTIRVWVVASRECKCDLR 271
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ D+++++W+
Sbjct: 354 LSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGFVDQTVKVWE 408
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDD--------------------IVVSASLDQTIRVWDISG----- 166
H H V C + P ++S S D+TI++WD+S
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332
Query: 167 --LRKKNVAPGM-----------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ N G+ ADD+ +++W + + + H + V+ + FH
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHK 390
Query: 214 KSEVIVSNAEDKSIRLWD 231
+ +V+ D+++++W+
Sbjct: 391 TAPYVVTGFVDQTVKVWE 408
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H ++ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D I+ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH + F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + IVS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 46/240 (19%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V ++ P I+S+ + I++W+ + ++ F H VR + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY--------------------PWILSA 111
D ++VW ++C L H + + E P++LS
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 171
S D+TI++W+ + C+ L GH+++V FH ++S + D+T+RVWD R
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC-- 372
Query: 172 VAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
+ H + V+ + FH + +V+ + D+++++W+
Sbjct: 373 ------------------------MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + ++SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG------LR---------------------- 168
+V + + ++ S S DQT+RVW ++ LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 169 ------KKNVAPG----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
KK+ PG G+ D+ IK+W ++ + GH N V VLFH + I
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFI 353
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWD 266
+S A+DK++R+WD + C+ T E F + + +V+ + D+++++W+
Sbjct: 354 LSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLT 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYC 226
Query: 165 ----SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISW 284
Query: 212 HPKSE--------------------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-- 249
P+S ++S + DK+I++WD++ CL T W
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--WVR 342
Query: 250 -------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDD--------------------IVVSASLDQTIRVWDISG----- 166
H H V C + P ++S S D+TI++WD+S
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332
Query: 167 --LRKKNVAPGM-----------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ N G+ ADD+ +++W + + + H + V+ + FH
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHK 390
Query: 214 KSEVIVSNAEDKSIRLWD 231
+ +V+ + D+++++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
++ S S D TI++WD G + GH +NV
Sbjct: 162 GKLLTSCSADMTIKLWDFQGFEC--------------------------IRTMHGHDHNV 195
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNA 257
S V P + +VS + DK+I++W++ C+ TF +E W +I S +
Sbjct: 196 SSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS 253
Query: 258 EDKSIRLWDMTKRTCLNTFRREQ 280
D+++R+W + + C R +
Sbjct: 254 NDQTVRVWVVATKECKAELREHE 276
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 364,349,410
Number of Sequences: 539616
Number of extensions: 15079579
Number of successful extensions: 54985
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 619
Number of HSP's that attempted gapping in prelim test: 36244
Number of HSP's gapped (non-prelim): 9299
length of query: 992
length of database: 191,569,459
effective HSP length: 127
effective length of query: 865
effective length of database: 123,038,227
effective search space: 106428066355
effective search space used: 106428066355
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)