Your job contains 1 sequence.
>psy2685
MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH
NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD
RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT
FRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHD
AGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYN
ATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNRFAVLDR
NHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLALECGNIDI
ALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMM
KIAEIRRDISGQYQAALLLGRMGRGFFLLHYFSFFFFAFLRLAFLYLITGNLEKLKKMMK
IAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLRTA
DPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEEIFYAGTGALLCREAD
HVILFDVQQKRALAQVKVAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQ
KRALAQVKVAKCRHVLYNKGEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRH
VVWSPDMTHLALLSKHTLHICNRKMEGAGLMKSDVINNIDSSLAATEVDVQGWGDDADLG
NQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGYP
EVALHFVKDDRTRLTLALECGNIPPHRSYSGR
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2685
(992 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p... 1594 3.3e-224 3
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p... 1594 3.3e-224 3
UNIPROTKB|P53621 - symbol:COPA "Coatomer subunit alpha" s... 1591 2.3e-223 3
UNIPROTKB|G3V6T1 - symbol:Copa "Protein Copa" species:101... 1587 6.2e-223 3
MGI|MGI:1334462 - symbol:Copa "coatomer protein complex s... 1587 6.2e-223 3
UNIPROTKB|F1RJX8 - symbol:COPA "Uncharacterized protein" ... 1587 7.9e-223 3
UNIPROTKB|Q27954 - symbol:COPA "Coatomer subunit alpha" s... 1587 7.9e-223 3
ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co... 1590 4.4e-220 3
FB|FBgn0025725 - symbol:alphaCop "alpha-coatomer protein"... 1572 1.3e-216 3
UNIPROTKB|F1PU93 - symbol:COPA "Coatomer subunit alpha" s... 1497 2.5e-213 3
WB|WBGene00022119 - symbol:Y71F9AL.17 species:6239 "Caeno... 1370 8.7e-186 3
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 1371 7.0e-182 3
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 1351 2.1e-180 3
DICTYBASE|DDB_G0267982 - symbol:copA "coatomer protein co... 1142 3.0e-169 4
ASPGD|ASPL0000037303 - symbol:copA species:162425 "Emeric... 1148 3.3e-159 3
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 1100 7.8e-152 3
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 768 1.1e-144 4
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 1056 3.1e-142 3
ASPGD|ASPL0000006005 - symbol:AN5972 species:162425 "Emer... 408 4.7e-46 2
POMBASE|SPBC16C6.13c - symbol:sec27 "coatomer beta' subun... 383 1.4e-42 2
FB|FBgn0025724 - symbol:beta'Cop "beta'-coatomer protein"... 420 3.5e-42 2
CGD|CAL0005039 - symbol:orf19.3467 species:5476 "Candida ... 417 2.2e-39 2
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 397 8.0e-39 3
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 392 5.6e-38 2
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 364 6.0e-38 3
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 382 3.0e-37 2
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 382 3.0e-37 2
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 384 3.0e-37 2
WB|WBGene00012757 - symbol:Y41C4A.11 species:6239 "Caenor... 292 3.2e-37 2
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 382 4.9e-37 2
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 382 4.9e-37 2
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 382 4.9e-37 2
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 382 4.9e-37 2
SGD|S000003105 - symbol:SEC27 "Essential beta'-coat prote... 374 6.3e-35 2
WB|WBGene00009542 - symbol:F38E11.5 species:6239 "Caenorh... 369 3.2e-33 3
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 327 1.9e-31 2
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 327 4.9e-31 2
RGD|1310525 - symbol:Copa "coatomer protein complex subun... 343 3.2e-28 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 291 2.9e-23 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 220 2.9e-23 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 273 1.5e-22 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 220 4.2e-22 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 220 4.2e-22 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 220 4.2e-22 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 220 4.2e-22 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 220 4.2e-22 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 220 4.2e-22 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 222 7.7e-22 2
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 189 1.2e-21 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 225 1.3e-21 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 216 1.8e-21 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 273 5.9e-21 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 273 5.9e-21 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 273 5.9e-21 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 273 5.9e-21 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 273 5.9e-21 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 273 5.9e-21 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 273 5.9e-21 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 273 5.9e-21 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 272 7.9e-21 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 272 7.9e-21 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 270 1.4e-20 1
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 200 2.1e-20 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 257 4.7e-20 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 265 6.4e-20 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 269 8.6e-20 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 271 9.0e-20 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 263 9.4e-20 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 273 1.4e-19 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 258 3.3e-19 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 241 4.0e-19 1
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 270 8.7e-19 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 265 1.7e-18 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 263 2.8e-18 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 263 3.8e-18 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 263 3.9e-18 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 266 4.0e-18 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 234 4.1e-18 2
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 263 6.4e-18 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 263 6.6e-18 2
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 229 7.7e-18 1
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 251 1.1e-17 1
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 251 1.1e-17 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 233 1.1e-17 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 243 1.6e-17 2
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 225 2.1e-17 1
ASPGD|ASPL0000008575 - symbol:AN6217 species:162425 "Emer... 247 2.6e-17 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 234 3.8e-17 1
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 243 4.4e-17 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 240 4.6e-17 1
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 179 4.7e-17 3
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 239 6.4e-17 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 248 7.3e-17 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 203 1.0e-16 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 241 1.2e-16 2
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 199 1.6e-16 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 239 2.1e-16 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 239 2.1e-16 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 238 2.2e-16 1
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 239 2.3e-16 1
WARNING: Descriptions of 969 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 1594 (566.2 bits), Expect = 3.3e-224, Sum P(3) = 3.3e-224
Identities = 295/444 (66%), Positives = 356/444 (80%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGAD 179
NWQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG + +D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 180 DRQIK-LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR--- 235
R I + + A + GH V+ FHP +IVS A+D+ +++W M +
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 236 ---TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
TC + + E+I+SN+EDKSIR+WDM+KRT + TFRR+ +RFWVL AH
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300
Query: 290 PTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGG 349
P LNLFAAGHD GM+VFK ERERPAY VH N++YYVK+RFL +LD +SKD VMQLR G
Sbjct: 301 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 350 GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE-ESERKEVADGKRSTGISAV 408
+ P ++SYN E+++L+ TR A+N ENSTYDLY IPK+ +S+ + +GKRS+G++AV
Sbjct: 361 SKFPVFNMSYNPAENAVLLCTR-ASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAV 419
Query: 409 WVARNRFAVLDRNHTILIKNLKNE 432
WVARNRFAVLDR H+ILIKNLKNE
Sbjct: 420 WVARNRFAVLDRMHSILIKNLKNE 443
Score = 455 (165.2 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 89/143 (62%), Positives = 115/143 (80%)
Query: 414 RFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLAL 473
+ A+++R + ++ ++N L +G +S + GYPEVALHFVKD++TR +LAL
Sbjct: 600 KLALINRKYDEVLHMVRNAKL--VG----QSIIAYLQKKGYPEVALHFVKDEKTRFSLAL 653
Query: 474 ECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNL 533
ECGNI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEMCYQRTKNFD+L+FLYLITGNL
Sbjct: 654 ECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNL 713
Query: 534 EKLKKMMKIAEIRRDISGQYQAA 556
EKL+KMMKIAEIR+D+SG YQ A
Sbjct: 714 EKLRKMMKIAEIRKDMSGHYQNA 736
Score = 368 (134.6 bits), Expect = 3.3e-224, Sum P(3) = 3.3e-224
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN VY LDREC P VL IDPTEFKFKLALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGY
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGY 634
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR +LALECGNI
Sbjct: 635 PEVALHFVKDEKTRFSLALECGNI 658
Score = 242 (90.2 bits), Expect = 3.3e-224, Sum P(3) = 3.3e-224
Identities = 49/95 (51%), Positives = 65/95 (68%)
Query: 772 HVILFDVQQKRALAQVKVAKCRHVLYNKGEEIFYAGTGALLCREADHVILFDVQQKRALA 831
H IL + +V+V C +EIFYAGTG LL R+AD + LFDVQQKR LA
Sbjct: 433 HSILIKNLKNEITKKVQVPNC--------DEIFYAGTGNLLLRDADSITLFDVQQKRTLA 484
Query: 832 QVKVAKCRHVVWSPDMTHLALLSKHTLHICNRKME 866
VK++K ++V+WS DM+H+ALL+KH + ICNRK+E
Sbjct: 485 SVKISKVKYVIWSADMSHVALLAKHAIMICNRKLE 519
Score = 190 (71.9 bits), Expect = 5.4e-184, Sum P(3) = 5.4e-184
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTS--LAYLTAATHG 645
ITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++IL++CGQ++ L L+ A G
Sbjct: 709 ITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILRNCGQSNSELTCLSLALEG 768
Query: 646 XXXXXXXXXXNLRTAD 661
++ AD
Sbjct: 769 EFCEMTTNEKEVKLAD 784
Score = 173 (66.0 bits), Expect = 6.4e-217, Sum P(3) = 6.4e-217
Identities = 31/63 (49%), Positives = 47/63 (74%)
Query: 736 VKVAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHV 795
+ + ++ +TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V
Sbjct: 435 ILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYV 494
Query: 796 LYN 798
+++
Sbjct: 495 IWS 497
Score = 170 (64.9 bits), Expect = 1.3e-216, Sum P(3) = 1.3e-216
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Score = 59 (25.8 bits), Expect = 2.1e-39, Sum P(3) = 2.1e-39
Identities = 58/293 (19%), Positives = 117/293 (39%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ I++W M SK V FR ++ + HP + + + I +R
Sbjct: 268 SEDKSIRVWDM--SKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 238 L----NTFRREQERFWSEVIVSNAEDKSI-RLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
N ++RF ++ ++++D ++ +L +K N E VL+
Sbjct: 326 YAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENA-VLLCTRAS 384
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVHNN-----VMYYVKERF-----LHRLDLTNSKDSV 342
NL + +D + + + P ++ + RF +H + + N K+ +
Sbjct: 385 NLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEI 444
Query: 343 VMQLRGGGRIP-AHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKR 401
+++ +P I Y T + +L R+A++ + +D+ +++ +A K
Sbjct: 445 TKKVQ----VPNCDEIFYAGTGNLLL---RDADSI--TLFDV-------QQKRTLASVKI 488
Query: 402 STGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMG-NDRQESALCGWPGTG 453
S +W A L H I+I N K E L + N R +S W +G
Sbjct: 489 SKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSG--AWDESG 539
Score = 39 (18.8 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 773 VILFDVQQKRALAQVKVAKCRHVLYNKGEEI 803
+++ D +Q+ A AQ +A CR + EI
Sbjct: 983 LLVVDNKQEIAEAQQLIAICREYIVGLSMEI 1013
Score = 38 (18.4 bits), Expect = 7.5e-212, Sum P(3) = 7.5e-212
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 819 VILFDVQQKRALAQVKVAKCRHVVWSPDMT-HLALLSKHTLHICNRKMEGA 868
+++ D +Q+ A AQ +A CR + M L K TL R E A
Sbjct: 983 LLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEHQKRICEMA 1033
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 1594 (566.2 bits), Expect = 3.3e-224, Sum P(3) = 3.3e-224
Identities = 295/444 (66%), Positives = 356/444 (80%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGAD 179
NWQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG + +D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 180 DRQIK-LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR--- 235
R I + + A + GH V+ FHP +IVS A+D+ +++W M +
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 236 ---TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
TC + + E+I+SN+EDKSIR+WDM+KRT + TFRR+ +RFWVL AH
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300
Query: 290 PTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGG 349
P LNLFAAGHD GM+VFK ERERPAY VH N++YYVK+RFL +LD +SKD VMQLR G
Sbjct: 301 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 350 GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE-ESERKEVADGKRSTGISAV 408
+ P ++SYN E+++L+ TR A+N ENSTYDLY IPK+ +S+ + +GKRS+G++AV
Sbjct: 361 SKFPVFNMSYNPAENAVLLCTR-ASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAV 419
Query: 409 WVARNRFAVLDRNHTILIKNLKNE 432
WVARNRFAVLDR H+ILIKNLKNE
Sbjct: 420 WVARNRFAVLDRMHSILIKNLKNE 443
Score = 455 (165.2 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 89/143 (62%), Positives = 115/143 (80%)
Query: 414 RFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLAL 473
+ A+++R + ++ ++N L +G +S + GYPEVALHFVKD++TR +LAL
Sbjct: 600 KLALINRKYDEVLHMVRNAKL--VG----QSIIAYLQKKGYPEVALHFVKDEKTRFSLAL 653
Query: 474 ECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNL 533
ECGNI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEMCYQRTKNFD+L+FLYLITGNL
Sbjct: 654 ECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNL 713
Query: 534 EKLKKMMKIAEIRRDISGQYQAA 556
EKL+KMMKIAEIR+D+SG YQ A
Sbjct: 714 EKLRKMMKIAEIRKDMSGHYQNA 736
Score = 368 (134.6 bits), Expect = 3.3e-224, Sum P(3) = 3.3e-224
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN VY LDREC P VL IDPTEFKFKLALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGY
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGY 634
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR +LALECGNI
Sbjct: 635 PEVALHFVKDEKTRFSLALECGNI 658
Score = 242 (90.2 bits), Expect = 3.3e-224, Sum P(3) = 3.3e-224
Identities = 49/95 (51%), Positives = 65/95 (68%)
Query: 772 HVILFDVQQKRALAQVKVAKCRHVLYNKGEEIFYAGTGALLCREADHVILFDVQQKRALA 831
H IL + +V+V C +EIFYAGTG LL R+AD + LFDVQQKR LA
Sbjct: 433 HSILIKNLKNEITKKVQVPNC--------DEIFYAGTGNLLLRDADSITLFDVQQKRTLA 484
Query: 832 QVKVAKCRHVVWSPDMTHLALLSKHTLHICNRKME 866
VK++K ++V+WS DM+H+ALL+KH + ICNRK+E
Sbjct: 485 SVKISKVKYVIWSADMSHVALLAKHAIMICNRKLE 519
Score = 187 (70.9 bits), Expect = 1.1e-183, Sum P(3) = 1.1e-183
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAY 638
ITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++IL++CGQ + Y
Sbjct: 709 ITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILRNCGQNNKGY 759
Score = 173 (66.0 bits), Expect = 6.4e-217, Sum P(3) = 6.4e-217
Identities = 31/63 (49%), Positives = 47/63 (74%)
Query: 736 VKVAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHV 795
+ + ++ +TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V
Sbjct: 435 ILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYV 494
Query: 796 LYN 798
+++
Sbjct: 495 IWS 497
Score = 170 (64.9 bits), Expect = 1.3e-216, Sum P(3) = 1.3e-216
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Score = 59 (25.8 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 58/293 (19%), Positives = 117/293 (39%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ I++W M SK V FR ++ + HP + + + I +R
Sbjct: 268 SEDKSIRVWDM--SKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 238 L----NTFRREQERFWSEVIVSNAEDKSI-RLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
N ++RF ++ ++++D ++ +L +K N E VL+
Sbjct: 326 YAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENA-VLLCTRAS 384
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVHNN-----VMYYVKERF-----LHRLDLTNSKDSV 342
NL + +D + + + P ++ + RF +H + + N K+ +
Sbjct: 385 NLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEI 444
Query: 343 VMQLRGGGRIP-AHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKR 401
+++ +P I Y T + +L R+A++ + +D+ +++ +A K
Sbjct: 445 TKKVQ----VPNCDEIFYAGTGNLLL---RDADSI--TLFDV-------QQKRTLASVKI 488
Query: 402 STGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMG-NDRQESALCGWPGTG 453
S +W A L H I+I N K E L + N R +S W +G
Sbjct: 489 SKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSG--AWDESG 539
Score = 39 (18.8 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 773 VILFDVQQKRALAQVKVAKCRHVLYNKGEEI 803
+++ D +Q+ A AQ +A CR + EI
Sbjct: 948 LLVVDNKQEIAEAQQLIAICREYIVGLSMEI 978
Score = 38 (18.4 bits), Expect = 7.5e-212, Sum P(3) = 7.5e-212
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 819 VILFDVQQKRALAQVKVAKCRHVVWSPDMT-HLALLSKHTLHICNRKMEGA 868
+++ D +Q+ A AQ +A CR + M L K TL R E A
Sbjct: 948 LLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEHQKRICEMA 998
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 1591 (565.1 bits), Expect = 2.3e-223, Sum P(3) = 2.3e-223
Identities = 294/444 (66%), Positives = 356/444 (80%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGAD 179
NWQSR C+CVLTGHNHYVMCAQFHPT+D+VVSASLDQT+RVWDISGLRKKN++PG + +D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 180 DRQIK-LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR--- 235
R I + + A + GH V+ FHP +IVS A+D+ +++W M +
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 236 ---TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
TC + + E+I+SN+EDKSIR+WDM+KRT + TFRR+ +RFWVL AH
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300
Query: 290 PTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGG 349
P LNLFAAGHD GM+VFK ERERPAY VH N+++YVK+RFL +LD +SKD VMQLR G
Sbjct: 301 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 350 GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE-ESERKEVADGKRSTGISAV 408
+ P ++SYN E+++L+ TR A+N ENSTYDLY IPK+ +S+ + +GKRS+G++AV
Sbjct: 361 SKFPVFNMSYNPAENAVLLCTR-ASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAV 419
Query: 409 WVARNRFAVLDRNHTILIKNLKNE 432
WVARNRFAVLDR H++LIKNLKNE
Sbjct: 420 WVARNRFAVLDRMHSLLIKNLKNE 443
Score = 458 (166.3 bits), Expect = 1.1e-212, Sum P(3) = 1.1e-212
Identities = 90/143 (62%), Positives = 115/143 (80%)
Query: 414 RFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLAL 473
+ A+++R + ++ ++N L +G +S + GYPEVALHFVKD++TR +LAL
Sbjct: 600 KLALINRKYDEVLHMVRNAKL--VG----QSIIAYLQKKGYPEVALHFVKDEKTRFSLAL 653
Query: 474 ECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNL 533
ECGNI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEMCYQRTKNFDKL+FLYLITGNL
Sbjct: 654 ECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNL 713
Query: 534 EKLKKMMKIAEIRRDISGQYQAA 556
EKL+KMMKIAEIR+D+SG YQ A
Sbjct: 714 EKLRKMMKIAEIRKDMSGHYQNA 736
Score = 368 (134.6 bits), Expect = 2.3e-223, Sum P(3) = 2.3e-223
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN VY LDREC P VL IDPTEFKFKLALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGY
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGY 634
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR +LALECGNI
Sbjct: 635 PEVALHFVKDEKTRFSLALECGNI 658
Score = 339 (124.4 bits), Expect = 3.9e-200, Sum P(3) = 3.9e-200
Identities = 68/110 (61%), Positives = 82/110 (74%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CGQ SLAYLTAATHG
Sbjct: 709 ITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLD 768
Query: 648 XXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPLLTVTK 696
T DP T+P + P A+LL+PPAP+ +TNWPLLTV+K
Sbjct: 769 EEAESLK---ETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSK 815
Score = 237 (88.5 bits), Expect = 2.3e-223, Sum P(3) = 2.3e-223
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+WS DM+H+ALL+KH + I
Sbjct: 454 DEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVI 513
Query: 861 CNRKME 866
CNRK++
Sbjct: 514 CNRKLD 519
Score = 172 (65.6 bits), Expect = 1.7e-216, Sum P(3) = 1.7e-216
Identities = 31/61 (50%), Positives = 46/61 (75%)
Query: 738 VAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVLY 797
+ ++ +TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V++
Sbjct: 437 IKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIW 496
Query: 798 N 798
+
Sbjct: 497 S 497
Score = 170 (64.9 bits), Expect = 2.8e-216, Sum P(3) = 2.8e-216
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Score = 59 (25.8 bits), Expect = 2.4e-40, Sum P(3) = 2.4e-40
Identities = 58/293 (19%), Positives = 117/293 (39%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ I++W M SK V FR ++ + HP + + + I +R
Sbjct: 268 SEDKSIRVWDM--SKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 238 L----NTFRREQERFWSEVIVSNAEDKSI-RLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
N ++RF ++ ++++D ++ +L +K N E VL+
Sbjct: 326 YAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENA-VLLCTRAS 384
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVHNN-----VMYYVKERF-----LHRLDLTNSKDSV 342
NL + +D + + + P ++ + RF +H L + N K+ +
Sbjct: 385 NLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEI 444
Query: 343 VMQLRGGGRIP-AHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKR 401
+++ +P I Y T + +L R+A++ + +D+ +++ +A K
Sbjct: 445 TKKVQ----VPNCDEIFYAGTGNLLL---RDADSI--TLFDV-------QQKRTLASVKI 488
Query: 402 STGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMG-NDRQESALCGWPGTG 453
S +W A L H I+I N K + L + N R +S W +G
Sbjct: 489 SKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSG--AWDESG 539
Score = 46 (21.3 bits), Expect = 1.1e-212, Sum P(3) = 1.1e-212
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 888 VDVQGWGDDADL 899
V +GWG+DA+L
Sbjct: 840 VGTEGWGEDAEL 851
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 1587 (563.7 bits), Expect = 6.2e-223, Sum P(3) = 6.2e-223
Identities = 293/444 (65%), Positives = 356/444 (80%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGAD 179
NWQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG + +D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 180 DRQIK-LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR--- 235
R I + + A + GH V+ FHP +IVS A+D+ +++W M +
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 236 ---TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
TC + + E+I+SN+EDKSIR+WDM+KRT + TFRR+ +RFWVL AH
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300
Query: 290 PTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGG 349
P LNLFAAGHD GM+VFK ERERPAY VH N+++YVK+RFL +LD +SKD VMQLR G
Sbjct: 301 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 350 GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE-ESERKEVADGKRSTGISAV 408
+ P ++SYN E+++L+ TR A+N ENSTYDLY IPK+ +S+ + +GKRS+G++AV
Sbjct: 361 SKFPVFNMSYNPAENAVLLCTR-ASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAV 419
Query: 409 WVARNRFAVLDRNHTILIKNLKNE 432
WVARNRFAVLDR H++LIKNLKNE
Sbjct: 420 WVARNRFAVLDRMHSLLIKNLKNE 443
Score = 458 (166.3 bits), Expect = 2.2e-212, Sum P(3) = 2.2e-212
Identities = 90/143 (62%), Positives = 115/143 (80%)
Query: 414 RFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLAL 473
+ A+++R + ++ ++N L +G +S + GYPEVALHFVKD++TR +LAL
Sbjct: 600 KLALINRKYDEVLHMVRNAKL--VG----QSIIAYLQKKGYPEVALHFVKDEKTRFSLAL 653
Query: 474 ECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNL 533
ECGNI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEMCYQRTKNFDKL+FLYLITGNL
Sbjct: 654 ECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNL 713
Query: 534 EKLKKMMKIAEIRRDISGQYQAA 556
EKL+KMMKIAEIR+D+SG YQ A
Sbjct: 714 EKLRKMMKIAEIRKDMSGHYQNA 736
Score = 368 (134.6 bits), Expect = 6.2e-223, Sum P(3) = 6.2e-223
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN VY LDREC P VL IDPTEFKFKLALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGY
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGY 634
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR +LALECGNI
Sbjct: 635 PEVALHFVKDEKTRFSLALECGNI 658
Score = 340 (124.7 bits), Expect = 1.1e-196, Sum P(2) = 1.1e-196
Identities = 74/134 (55%), Positives = 89/134 (66%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CGQ SLAYLTAATHG
Sbjct: 709 ITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLD 768
Query: 648 XXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEEI 706
T DP T+P + P A+LL+PPAP+ +TNWPLLTV+K G I
Sbjct: 769 EEAESLK---ETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFE-G--SI 822
Query: 707 FYAGTGALLCREAD 720
G G L + D
Sbjct: 823 ASKGKGGALAADID 836
Score = 237 (88.5 bits), Expect = 6.2e-223, Sum P(3) = 6.2e-223
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+WS DM+H+ALL+KH + I
Sbjct: 454 DEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVI 513
Query: 861 CNRKME 866
CNRK++
Sbjct: 514 CNRKLD 519
Score = 172 (65.6 bits), Expect = 4.5e-216, Sum P(3) = 4.5e-216
Identities = 31/61 (50%), Positives = 46/61 (75%)
Query: 738 VAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVLY 797
+ ++ +TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V++
Sbjct: 437 IKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIW 496
Query: 798 N 798
+
Sbjct: 497 S 497
Score = 170 (64.9 bits), Expect = 7.3e-216, Sum P(3) = 7.3e-216
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Score = 60 (26.2 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 58/293 (19%), Positives = 117/293 (39%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ I++W M SK V FR ++ + HP + + + I +R
Sbjct: 268 SEDKSIRVWDM--SKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 238 L----NTFRREQERFWSEVIVSNAEDKSI-RLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
N ++RF ++ ++++D ++ +L +K N E VL+
Sbjct: 326 YAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENA-VLLCTRAS 384
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVHNN-----VMYYVKERF-----LHRLDLTNSKDSV 342
NL + +D + + + P ++ + RF +H L + N K+ +
Sbjct: 385 NLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEI 444
Query: 343 VMQLRGGGRIP-AHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKR 401
+++ +P I Y T + +L R+A++ + +D+ +++ +A K
Sbjct: 445 TKKIQ----VPNCDEIFYAGTGNLLL---RDADSI--TLFDV-------QQKRTLASVKI 488
Query: 402 STGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMG-NDRQESALCGWPGTG 453
S +W A L H I+I N K + L + N R +S W +G
Sbjct: 489 SKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSG--AWDESG 539
Score = 47 (21.6 bits), Expect = 2.2e-212, Sum P(3) = 2.2e-212
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 869 GLMKSDVINNIDSSLAATEVDV-----QGWGDDADL 899
G + + + A ++D+ +GWG+DA+L
Sbjct: 816 GFFEGSIASKGKGGALAADIDIDTVGTEGWGEDAEL 851
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 1587 (563.7 bits), Expect = 6.2e-223, Sum P(3) = 6.2e-223
Identities = 293/444 (65%), Positives = 356/444 (80%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGAD 179
NWQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG + +D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 180 DRQIK-LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR--- 235
R I + + A + GH V+ FHP +IVS A+D+ +++W M +
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 236 ---TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
TC + + E+I+SN+EDKSIR+WDM+KRT + TFRR+ +RFWVL AH
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300
Query: 290 PTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGG 349
P LNLFAAGHD GM+VFK ERERPAY VH N+++YVK+RFL +LD +SKD VMQLR G
Sbjct: 301 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 350 GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE-ESERKEVADGKRSTGISAV 408
+ P ++SYN E+++L+ TR A+N ENSTYDLY IPK+ +S+ + +GKRS+G++AV
Sbjct: 361 SKFPVFNMSYNPAENAVLLCTR-ASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAV 419
Query: 409 WVARNRFAVLDRNHTILIKNLKNE 432
WVARNRFAVLDR H++LIKNLKNE
Sbjct: 420 WVARNRFAVLDRMHSLLIKNLKNE 443
Score = 458 (166.3 bits), Expect = 2.2e-212, Sum P(3) = 2.2e-212
Identities = 90/143 (62%), Positives = 115/143 (80%)
Query: 414 RFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLAL 473
+ A+++R + ++ ++N L +G +S + GYPEVALHFVKD++TR +LAL
Sbjct: 600 KLALINRKYDEVLHMVRNAKL--VG----QSIIAYLQKKGYPEVALHFVKDEKTRFSLAL 653
Query: 474 ECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNL 533
ECGNI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEMCYQRTKNFDKL+FLYLITGNL
Sbjct: 654 ECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNL 713
Query: 534 EKLKKMMKIAEIRRDISGQYQAA 556
EKL+KMMKIAEIR+D+SG YQ A
Sbjct: 714 EKLRKMMKIAEIRKDMSGHYQNA 736
Score = 368 (134.6 bits), Expect = 6.2e-223, Sum P(3) = 6.2e-223
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN VY LDREC P VL IDPTEFKFKLALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGY
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGY 634
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR +LALECGNI
Sbjct: 635 PEVALHFVKDEKTRFSLALECGNI 658
Score = 336 (123.3 bits), Expect = 2.9e-196, Sum P(2) = 2.9e-196
Identities = 73/134 (54%), Positives = 89/134 (66%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CGQ SLAYL+AATHG
Sbjct: 709 ITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLSAATHGLD 768
Query: 648 XXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEEI 706
T DP T+P + P A+LL+PPAP+ +TNWPLLTV+K G I
Sbjct: 769 EEAESLK---ETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFE-G--SI 822
Query: 707 FYAGTGALLCREAD 720
G G L + D
Sbjct: 823 ASKGKGGALAADID 836
Score = 237 (88.5 bits), Expect = 6.2e-223, Sum P(3) = 6.2e-223
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+WS DM+H+ALL+KH + I
Sbjct: 454 DEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVI 513
Query: 861 CNRKME 866
CNRK++
Sbjct: 514 CNRKLD 519
Score = 172 (65.6 bits), Expect = 4.5e-216, Sum P(3) = 4.5e-216
Identities = 31/61 (50%), Positives = 46/61 (75%)
Query: 738 VAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVLY 797
+ ++ +TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V++
Sbjct: 437 IKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIW 496
Query: 798 N 798
+
Sbjct: 497 S 497
Score = 170 (64.9 bits), Expect = 7.3e-216, Sum P(3) = 7.3e-216
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+AD + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Score = 60 (26.2 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 58/293 (19%), Positives = 117/293 (39%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ I++W M SK V FR ++ + HP + + + I +R
Sbjct: 268 SEDKSIRVWDM--SKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 238 L----NTFRREQERFWSEVIVSNAEDKSI-RLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
N ++RF ++ ++++D ++ +L +K N E VL+
Sbjct: 326 YAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENA-VLLCTRAS 384
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVHNN-----VMYYVKERF-----LHRLDLTNSKDSV 342
NL + +D + + + P ++ + RF +H L + N K+ +
Sbjct: 385 NLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEI 444
Query: 343 VMQLRGGGRIP-AHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKR 401
+++ +P I Y T + +L R+A++ + +D+ +++ +A K
Sbjct: 445 TKKIQ----VPNCDEIFYAGTGNLLL---RDADSI--TLFDV-------QQKRTLASVKI 488
Query: 402 STGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMG-NDRQESALCGWPGTG 453
S +W A L H I+I N K + L + N R +S W +G
Sbjct: 489 SKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSG--AWDESG 539
Score = 47 (21.6 bits), Expect = 2.2e-212, Sum P(3) = 2.2e-212
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 869 GLMKSDVINNIDSSLAATEVDV-----QGWGDDADL 899
G + + + A ++D+ +GWG+DA+L
Sbjct: 816 GFFEGSIASKGKGGALAADIDIDTVGTEGWGEDAEL 851
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 1587 (563.7 bits), Expect = 7.9e-223, Sum P(3) = 7.9e-223
Identities = 293/444 (65%), Positives = 356/444 (80%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGAD 179
NWQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG + +D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 180 DRQIK-LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR--- 235
R I + + A + GH V+ FHP +IVS A+D+ +++W M +
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 236 ---TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
TC + + E+I+SN+EDKSIR+WDM+KRT + TFRR+ +RFWVL AH
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300
Query: 290 PTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGG 349
P LNLFAAGHD GM+VFK ERERPAY VH N+++YVK+RFL +LD +SKD VMQLR G
Sbjct: 301 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 350 GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE-ESERKEVADGKRSTGISAV 408
+ P ++SYN E+++L+ TR A+N ENSTYDLY IPK+ +S+ + +GKRS+G++AV
Sbjct: 361 SKFPVFNMSYNPAENAVLLCTR-ASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAV 419
Query: 409 WVARNRFAVLDRNHTILIKNLKNE 432
WVARNRFAVLDR H++LIKNLKNE
Sbjct: 420 WVARNRFAVLDRMHSLLIKNLKNE 443
Score = 458 (166.3 bits), Expect = 2.2e-212, Sum P(3) = 2.2e-212
Identities = 90/143 (62%), Positives = 115/143 (80%)
Query: 414 RFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLAL 473
+ A+++R + ++ ++N L +G +S + GYPEVALHFVKD++TR +LAL
Sbjct: 600 KLALINRKYDEVLHMVRNAKL--VG----QSIIAYLQKKGYPEVALHFVKDEKTRFSLAL 653
Query: 474 ECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNL 533
ECGNI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEMCYQRTKNFDKL+FLYLITGNL
Sbjct: 654 ECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNL 713
Query: 534 EKLKKMMKIAEIRRDISGQYQAA 556
EKL+KMMKIAEIR+D+SG YQ A
Sbjct: 714 EKLRKMMKIAEIRKDMSGHYQNA 736
Score = 368 (134.6 bits), Expect = 7.9e-223, Sum P(3) = 7.9e-223
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN VY LDREC P VL IDPTEFKFKLALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGY
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGY 634
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR +LALECGNI
Sbjct: 635 PEVALHFVKDEKTRFSLALECGNI 658
Score = 343 (125.8 bits), Expect = 5.3e-197, Sum P(2) = 5.3e-197
Identities = 76/135 (56%), Positives = 92/135 (68%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CGQ SLAYLTAATHG
Sbjct: 709 ITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLD 768
Query: 648 XXXXXXXXNLR-TADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEE 705
NL+ T DP T+P + P A+LL+PPAP+ +TNWPLLTV+K G
Sbjct: 769 EEAE----NLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFE-G--S 821
Query: 706 IFYAGTGALLCREAD 720
I G G L + D
Sbjct: 822 IASKGKGGALAADID 836
Score = 236 (88.1 bits), Expect = 7.9e-223, Sum P(3) = 7.9e-223
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V+WS DM+H+ALL+KH + I
Sbjct: 454 DEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVI 513
Query: 861 CNRKME 866
CNRK+E
Sbjct: 514 CNRKLE 519
Score = 169 (64.5 bits), Expect = 9.3e-216, Sum P(3) = 9.3e-216
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 738 VAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVLY 797
+ ++ +TKK+ C+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V++
Sbjct: 437 IKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIW 496
Query: 798 NKGEEIFYAGTGALLCREADHVILFDVQQKRALAQV-KVAKCRHVVWSPDMTHLALLSKH 856
+ ++ + ALL A H I+ ++ AL + + + + W + S H
Sbjct: 497 SA--DMSHV---ALL---AKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYTTSNH 548
Score = 166 (63.5 bits), Expect = 1.9e-215, Sum P(3) = 1.9e-215
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Score = 61 (26.5 bits), Expect = 1.2e-40, Sum P(3) = 1.2e-40
Identities = 59/293 (20%), Positives = 116/293 (39%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ I++W M SK V FR ++ + HP + + + I +R
Sbjct: 268 SEDKSIRVWDM--SKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 238 L----NTFRREQERFWSEVIVSNAEDKSI-RLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
N ++RF ++ ++++D ++ +L +K N E VL+
Sbjct: 326 YAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENA-VLLCTRAS 384
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVHNN-----VMYYVKERF-----LHRLDLTNSKDSV 342
NL + +D + + + P ++ + RF +H L + N K+ +
Sbjct: 385 NLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEI 444
Query: 343 VMQLRGGGRIP-AHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKR 401
+++ +P I Y T + +L R+A + + +D+ +++ +A K
Sbjct: 445 TKKVQ----VPNCDEIFYAGTGNLLL---RDAESI--TLFDV-------QQKRTLASVKI 488
Query: 402 STGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMG-NDRQESALCGWPGTG 453
S +W A L H I+I N K E L + N R +S W +G
Sbjct: 489 SKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSG--AWDESG 539
Score = 47 (21.6 bits), Expect = 2.2e-212, Sum P(3) = 2.2e-212
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 869 GLMKSDVINNIDSSLAATEVDV-----QGWGDDADL 899
G + + + A ++D+ +GWG+DA+L
Sbjct: 816 GFFEGSIASKGKGGALAADIDIDTVGTEGWGEDAEL 851
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 1587 (563.7 bits), Expect = 7.9e-223, Sum P(3) = 7.9e-223
Identities = 293/444 (65%), Positives = 356/444 (80%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGAD 179
NWQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG + +D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 180 DRQIK-LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR--- 235
R I + + A + GH V+ FHP +IVS A+D+ +++W M +
Sbjct: 181 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240
Query: 236 ---TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
TC + + E+I+SN+EDKSIR+WDM+KRT + TFRR+ +RFWVL AH
Sbjct: 241 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300
Query: 290 PTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGG 349
P LNLFAAGHD GM+VFK ERERPAY VH N+++YVK+RFL +LD +SKD VMQLR G
Sbjct: 301 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 350 GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE-ESERKEVADGKRSTGISAV 408
+ P S+SYN E+++L+ TR A+N ENSTYDLY IPK+ +++ + +GKRS+G++AV
Sbjct: 361 SKFPVFSMSYNPAENAVLLCTR-ASNLENSTYDLYTIPKDADTQNPDAPEGKRSSGLTAV 419
Query: 409 WVARNRFAVLDRNHTILIKNLKNE 432
WVARNRFAVLDR H++LIKNLKNE
Sbjct: 420 WVARNRFAVLDRMHSLLIKNLKNE 443
Score = 458 (166.3 bits), Expect = 2.2e-212, Sum P(3) = 2.2e-212
Identities = 90/143 (62%), Positives = 115/143 (80%)
Query: 414 RFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLAL 473
+ A+++R + ++ ++N L +G +S + GYPEVALHFVKD++TR +LAL
Sbjct: 600 KLALINRKYDEVLHMVRNAKL--VG----QSIIAYLQKKGYPEVALHFVKDEKTRFSLAL 653
Query: 474 ECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNL 533
ECGNI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEMCYQRTKNFDKL+FLYLITGNL
Sbjct: 654 ECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNL 713
Query: 534 EKLKKMMKIAEIRRDISGQYQAA 556
EKL+KMMKIAEIR+D+SG YQ A
Sbjct: 714 EKLRKMMKIAEIRKDMSGHYQNA 736
Score = 368 (134.6 bits), Expect = 7.9e-223, Sum P(3) = 7.9e-223
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN VY LDREC P VL IDPTEFKFKLALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGY
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGY 634
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR +LALECGNI
Sbjct: 635 PEVALHFVKDEKTRFSLALECGNI 658
Score = 340 (124.7 bits), Expect = 1.1e-196, Sum P(2) = 1.1e-196
Identities = 74/134 (55%), Positives = 89/134 (66%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CGQ SLAYLTAATHG
Sbjct: 709 ITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLD 768
Query: 648 XXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEEI 706
T DP T+P + P A+LL+PPAP+ +TNWPLLTV+K G I
Sbjct: 769 EEAESLK---ETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFE-G--SI 822
Query: 707 FYAGTGALLCREAD 720
G G L + D
Sbjct: 823 ASKGKGGALAADID 836
Score = 236 (88.1 bits), Expect = 7.9e-223, Sum P(3) = 7.9e-223
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V+WS DM+H+ALL+KH + I
Sbjct: 454 DEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVI 513
Query: 861 CNRKME 866
CNRK+E
Sbjct: 514 CNRKLE 519
Score = 169 (64.5 bits), Expect = 9.3e-216, Sum P(3) = 9.3e-216
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 738 VAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVLY 797
+ ++ +TKK+ C+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V++
Sbjct: 437 IKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIW 496
Query: 798 NKGEEIFYAGTGALLCREADHVILFDVQQKRALAQV-KVAKCRHVVWSPDMTHLALLSKH 856
+ ++ + ALL A H I+ ++ AL + + + + W + S H
Sbjct: 497 SA--DMSHV---ALL---AKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYTTSNH 548
Score = 166 (63.5 bits), Expect = 1.9e-215, Sum P(3) = 1.9e-215
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 444 ITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIWSADMSHV 503
Score = 56 (24.8 bits), Expect = 3.9e-40, Sum P(3) = 3.9e-40
Identities = 58/293 (19%), Positives = 116/293 (39%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ I++W M SK V FR ++ + HP + + + I +R
Sbjct: 268 SEDKSIRVWDM--SKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 238 L----NTFRREQERFWSEVIVSNAEDKSI-RLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
N ++RF ++ ++++D ++ +L +K + E VL+
Sbjct: 326 YAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFSMSYNPAENA-VLLCTRAS 384
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVHNN-----VMYYVKERF-----LHRLDLTNSKDSV 342
NL + +D + + + P ++ + RF +H L + N K+ +
Sbjct: 385 NLENSTYDLYTIPKDADTQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEI 444
Query: 343 VMQLRGGGRIP-AHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKR 401
+++ +P I Y T + +L R+A + + +D+ +++ +A K
Sbjct: 445 TKKVQ----VPNCDEIFYAGTGNLLL---RDAESI--TLFDV-------QQKRTLASVKI 488
Query: 402 STGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMG-NDRQESALCGWPGTG 453
S +W A L H I+I N K E L + N R +S W +G
Sbjct: 489 SKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSG--AWDESG 539
Score = 47 (21.6 bits), Expect = 2.2e-212, Sum P(3) = 2.2e-212
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 869 GLMKSDVINNIDSSLAATEVDV-----QGWGDDADL 899
G + + + A ++D+ +GWG+DA+L
Sbjct: 816 GFFEGSIASKGKGGALAADIDIDTVGTEGWGEDAEL 851
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 1590 (564.8 bits), Expect = 4.4e-220, Sum P(3) = 4.4e-220
Identities = 302/467 (64%), Positives = 369/467 (79%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QQP+FVSGGDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGAD 179
NWQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG + +
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE 180
Query: 180 DRQIK---LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
R I L+ +D+ V + +GH V+ FHP +IVS A+D+ +++W M +
Sbjct: 181 VRGISGVDLFGASDAVVKHV-LEQGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESK 239
Query: 237 C--LNTFRREQER-----FW--SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
L+T R F E+I+SN+EDKSIR+WDM+KRT + TFRR+ +RFWVL
Sbjct: 240 AWELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLG 299
Query: 288 AHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLR 347
AHP LNLFAAGHD+GM+VFK ERERPAY V+ N++YYVK+RFL +LD +SKD+ VMQLR
Sbjct: 300 AHPNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLR 359
Query: 348 GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE-ESERKEVADGKRSTGIS 406
G + P S+SYN E+++L+ TR A N ENSTYDLY IP+E +S+ + +GKRS+G++
Sbjct: 360 SGSKFPVFSMSYNPAENAVLLCTR-ATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLT 418
Query: 407 AVWVARNRFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTG 453
AVWVARNRFAVLDR H++LIKNLKNE + ++ E + GTG
Sbjct: 419 AVWVARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIF--YAGTG 463
Score = 450 (163.5 bits), Expect = 2.0e-211, Sum P(3) = 2.0e-211
Identities = 88/145 (60%), Positives = 115/145 (79%)
Query: 412 RNRFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTL 471
R + A+++R + ++ ++N L +G +S + GYPEVALHFVKD++TR +L
Sbjct: 600 RFKLALVNRKYEEVLHMVRNAKL--VG----QSIIAYLQKKGYPEVALHFVKDEKTRFSL 653
Query: 472 ALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITG 531
ALECGNI++ALEAA+ L+++S WERLG AAL+QG+HQ+VEMCYQRTKNFDKL FLYLITG
Sbjct: 654 ALECGNIEVALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITG 713
Query: 532 NLEKLKKMMKIAEIRRDISGQYQAA 556
NL KL+KMMKIAEIR+D+SG YQ A
Sbjct: 714 NLTKLRKMMKIAEIRKDMSGHYQGA 738
Score = 363 (132.8 bits), Expect = 4.4e-220, Sum P(3) = 4.4e-220
Identities = 67/84 (79%), Positives = 77/84 (91%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN VY LDREC P VL IDPTE++FKLAL+N KYEEVLH+VRN++LVGQSIIAYLQ+KGY
Sbjct: 577 GNSVYCLDRECRPRVLDIDPTEYRFKLALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGY 636
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR +LALECGNI
Sbjct: 637 PEVALHFVKDEKTRFSLALECGNI 660
Score = 319 (117.4 bits), Expect = 1.3e-197, Sum P(3) = 1.3e-197
Identities = 66/110 (60%), Positives = 78/110 (70%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNL KL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CGQ SLAYLTAATHG
Sbjct: 711 ITGNLTKLRKMMKIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMD 770
Query: 648 XXXXXXXXNLRTAD-PNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVTK 696
T D +P V P AQLL+PP P+ +TNWPLLTV+K
Sbjct: 771 EEAEALK---ETFDLEKEMVPEVDPNAQLLQPPPPINPLDTNWPLLTVSK 817
Score = 212 (79.7 bits), Expect = 4.4e-220, Sum P(3) = 4.4e-220
Identities = 47/96 (48%), Positives = 63/96 (65%)
Query: 772 HVILFDVQQKRALAQVKVAKCRHVLYNKGEEIFYAGTGALLCREADHVILFDVQQKRALA 831
H +L + + +V+V C EEIFYAGTG+LL R+A+ V LFDVQQKR+LA
Sbjct: 434 HSLLIKNLKNEIVKKVQVPSC--------EEIFYAGTGSLLLRDAEGVTLFDVQQKRSLA 485
Query: 832 QVKVAKCRHVVWSPD-MTHLALLSKHTLHICNRKME 866
VK+AK ++VVWS D LL+KH + ICN+K+E
Sbjct: 486 TVKIAKVKYVVWSSDCQPREPLLAKHAIMICNKKLE 521
Score = 171 (65.3 bits), Expect = 9.3e-216, Sum P(3) = 9.3e-216
Identities = 32/61 (52%), Positives = 47/61 (77%)
Query: 738 VAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVLY 797
+ ++ + KK+ CEEIFYAGTG+LL R+A+ V LFDVQQKR+LA VK+AK ++V++
Sbjct: 438 IKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDAEGVTLFDVQQKRSLATVKIAKVKYVVW 497
Query: 798 N 798
+
Sbjct: 498 S 498
Score = 169 (64.5 bits), Expect = 1.5e-215, Sum P(3) = 1.5e-215
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV 745
+ KK+ CEEIFYAGTG+LL R+A+ V LFDVQQKR+LA VK+AK ++VV
Sbjct: 445 IVKKVQVPSCEEIFYAGTGSLLLRDAEGVTLFDVQQKRSLATVKIAKVKYVV 496
Score = 43 (20.2 bits), Expect = 2.0e-211, Sum P(3) = 2.0e-211
Identities = 6/9 (66%), Positives = 9/9 (100%)
Query: 891 QGWGDDADL 899
+GWG+DA+L
Sbjct: 845 EGWGEDAEL 853
Score = 39 (18.8 bits), Expect = 5.2e-211, Sum P(3) = 5.2e-211
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 875 VINNI-DSSLAATEVDVQGWGDDADLGNQVYYLDRECSPHV 914
++ N SLA G ++A+ + + L++E P V
Sbjct: 750 ILKNCGQKSLAYLTAATHGMDEEAEALKETFDLEKEMVPEV 790
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 1572 (558.4 bits), Expect = 1.3e-216, Sum P(3) = 1.3e-216
Identities = 295/446 (66%), Positives = 345/446 (77%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLT FE+KSARVKGLSFHPKRPWIL SLH+GVIQLWDYRM+TLLEKFDEH+GPVRG+ FH
Sbjct: 1 MLTNFESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
Q P+FVSGGDDYKIKVWNYKQR+CIFTLL HLDY+RT FHHEYPWILSASDDQTIRIW
Sbjct: 61 QQMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
NWQSRNCICVLTGHNHYVMCAQFHPT+D +VSASLDQT+RVWDISGLRKKNVAPG G D
Sbjct: 121 NWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDISGLRKKNVAPGPGGLD 180
Query: 181 RQIK-----LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
+K + A + GH + FHP +IVS A+D+ ++LW M +
Sbjct: 181 DHLKGHPGATDLFGQADAVVKHVLEGHDRGFNWASFHPTLPLIVSGADDRLVKLWRMNEY 240
Query: 236 ------TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
TC + + ++I+SN ED+SIR+WDMTKR CL TFRR+ ERFW+L
Sbjct: 241 KAWEVDTCRGHYNNVSSVLFHPRQDLILSNGEDRSIRVWDMTKRQCLFTFRRDNERFWIL 300
Query: 287 VAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQL 346
AHPTLNLFAAGHD GMVVFK ERERPAY VH N++YYVKERFL +LD T +KD+VVMQL
Sbjct: 301 TAHPTLNLFAAGHDGGMVVFKLERERPAYAVHGNILYYVKERFLRKLDFTTTKDTVVMQL 360
Query: 347 RGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGIS 406
R G + P +S+SYN +++L+ TR NN ENSTYDL IPK+ + E +D KRS+GI+
Sbjct: 361 RPG-KSPVYSMSYNPALNAVLICTRT-NNLENSTYDLCQIPKDTESQSE-SDSKRSSGIT 417
Query: 407 AVWVARNRFAVLDRNHTILIKNLKNE 432
A+WVARNRFAVLDRN ++IKN KNE
Sbjct: 418 AIWVARNRFAVLDRNQQLVIKNFKNE 443
Score = 455 (165.2 bits), Expect = 1.8e-210, Sum P(3) = 1.8e-210
Identities = 90/134 (67%), Positives = 107/134 (79%)
Query: 425 LIKNLKNEYLWRMGNDRQ--ESALCGWPGTGYPEVALHFVKDDRTRLTLALECGNIDIAL 482
LI+ +E L + N R +S + GYPEVALHFVKD++TR LALECGNI+IAL
Sbjct: 602 LIQRKYDEVLHMVRNARLVGQSIIAYLQQKGYPEVALHFVKDEKTRFGLALECGNIEIAL 661
Query: 483 EAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKI 542
EAA+ L+DK W+RLG +AL+QGNHQ+VEMCYQRTKNFDKL+FLYLITGNLEKLKKM KI
Sbjct: 662 EAAKALDDKDCWDRLGQSALLQGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLKKMNKI 721
Query: 543 AEIRRDISGQYQAA 556
AEIR+D+S QYQ A
Sbjct: 722 AEIRKDVSAQYQGA 735
Score = 357 (130.7 bits), Expect = 1.3e-216, Sum P(3) = 1.3e-216
Identities = 68/84 (80%), Positives = 75/84 (89%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GNQV+ LDREC VL IDPTE+KFKLALI KY+EVLH+VRN+RLVGQSIIAYLQQKGY
Sbjct: 574 GNQVFCLDRECRTRVLHIDPTEYKFKLALIQRKYDEVLHMVRNARLVGQSIIAYLQQKGY 633
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR LALECGNI
Sbjct: 634 PEVALHFVKDEKTRFGLALECGNI 657
Score = 343 (125.8 bits), Expect = 1.2e-198, Sum P(3) = 1.2e-198
Identities = 69/109 (63%), Positives = 84/109 (77%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNLEKLKKM KIAEIR+D+S QYQ ALLLG+V ER+ ILK+CGQ SLAYLTAATHG
Sbjct: 708 ITGNLEKLKKMNKIAEIRKDVSAQYQGALLLGDVKERVNILKNCGQLSLAYLTAATHGFD 767
Query: 648 XXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVTK 696
++ T+ N+ LP V+P AQLL+PP P+ + ETNWPLL+V+K
Sbjct: 768 ELTESLGESI-TSQGNS-LPEVNPNAQLLQPPVPIQQLETNWPLLSVSK 814
Score = 203 (76.5 bits), Expect = 1.3e-216, Sum P(3) = 1.3e-216
Identities = 36/66 (54%), Positives = 54/66 (81%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
EEIFYAGTG LL R+ + V L++VQ+ ++ +K+AKCR+VVWSPDM+ +ALL KH++ I
Sbjct: 453 EEIFYAGTGMLLIRDPEFVTLYEVQRLVSVGSIKLAKCRYVVWSPDMSLVALLCKHSVTI 512
Query: 861 CNRKME 866
C+R+++
Sbjct: 513 CDRRLQ 518
Score = 152 (58.6 bits), Expect = 3.2e-211, Sum P(3) = 3.2e-211
Identities = 41/124 (33%), Positives = 69/124 (55%)
Query: 735 QVKVAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRH 794
Q+ + ++ VTKK+ + CEEIFYAGTG LL R+ + V L++VQ+ ++ +K+AKCR+
Sbjct: 434 QLVIKNFKNEVTKKLPTF-CEEIFYAGTGMLLIRDPEFVTLYEVQRLVSVGSIKLAKCRY 492
Query: 795 VLYNKGEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCR--HVVWSPDMTHLAL 852
V+++ + ALLC+ + V + D ++ + L V+ CR W +
Sbjct: 493 VVWSPDMSLV-----ALLCKHS--VTICD-RRLQYLCTVQ-ENCRVKSGAWDESGVFIYT 543
Query: 853 LSKH 856
S H
Sbjct: 544 TSNH 547
Score = 143 (55.4 bits), Expect = 2.9e-210, Sum P(3) = 2.9e-210
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
VTKK+ + CEEIFYAGTG LL R+ + V L++VQ+ ++ +K+AKCR+VV + MS V
Sbjct: 444 VTKKLPTF-CEEIFYAGTGMLLIRDPEFVTLYEVQRLVSVGSIKLAKCRYVVWSPDMSLV 502
Score = 50 (22.7 bits), Expect = 9.5e-168, Sum P(3) = 9.5e-168
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 464 DDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGN 506
D + R+ + CG + +A A + E LG + QGN
Sbjct: 740 DVKERVNILKNCGQLSLAYLTAATHGFDELTESLGESITSQGN 782
Score = 47 (21.6 bits), Expect = 1.8e-210, Sum P(3) = 1.8e-210
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 892 GWGDDADLG 900
GWG DADLG
Sbjct: 853 GWGADADLG 861
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 1497 (532.0 bits), Expect = 2.5e-213, Sum P(3) = 2.5e-213
Identities = 277/433 (63%), Positives = 340/433 (78%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+K LSFHPKRPWILSSLHNGVIQLW TL++KFDEH+GPVRGI FH QQP+FVSGGD
Sbjct: 2 LKRLSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 61
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
DYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+WNWQSR C+CVL
Sbjct: 62 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 121
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGADDRQIK-LWRMN 189
TGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG + +D R I +
Sbjct: 122 TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 181
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR------TCLNTFRR 243
+ A + GH V+ FHP +IVS A+D+ +++W M + TC +
Sbjct: 182 TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 241
Query: 244 EQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHD 300
+ E+I+SN+EDKSIR+WDM+KRT + TFRR+ +RFWVL AHP LNLFAAGHD
Sbjct: 242 VSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHD 301
Query: 301 AGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYN 360
GM+VFK ERERPAY VH N+++YVK+RFL +LD +SKD VMQLR G + P ++SYN
Sbjct: 302 GGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYN 361
Query: 361 ATEHSILVTTRNANNFENSTYDLYMIPKE-ESERKEVADGKRSTGISAVWVARNRFAVLD 419
E+++L+ TR A+N ENSTYDLY IPK+ +S+ + +GKRS+G++AVWVARNRFAVLD
Sbjct: 362 PAENAVLLCTR-ASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLD 420
Query: 420 RNHTILIKNLKNE 432
R H++LIKNLKNE
Sbjct: 421 RMHSLLIKNLKNE 433
Score = 507 (183.5 bits), Expect = 8.4e-88, Sum P(3) = 8.4e-88
Identities = 100/253 (39%), Positives = 148/253 (58%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ KF+ V+G+ FH ++P +S + I++W+Y++ L H +R FH
Sbjct: 33 LIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH 92
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
++ P +S DD I+VWN++ R C+ L GH Y+ FH ++SAS DQT+R+W
Sbjct: 93 HEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 152
Query: 121 N---WQSRNCIC-VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 176
+ + +N + + T D VV L+ R + +
Sbjct: 153 DISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVS 212
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GADDRQ+K+WRMN+SKAWEVD RGHYNNVSC +FHP+ E+I+SN+EDKSIR+WDM+KRT
Sbjct: 213 GADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRT 272
Query: 237 CLNTFRREQERFW 249
+ TFRR+ +RFW
Sbjct: 273 GVQTFRRDHDRFW 285
Score = 458 (166.3 bits), Expect = 7.0e-203, Sum P(3) = 7.0e-203
Identities = 90/143 (62%), Positives = 115/143 (80%)
Query: 414 RFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLAL 473
+ A+++R + ++ ++N L +G +S + GYPEVALHFVKD++TR +LAL
Sbjct: 590 KLALINRKYDEVLHMVRNAKL--VG----QSIIAYLQKKGYPEVALHFVKDEKTRFSLAL 643
Query: 474 ECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNL 533
ECGNI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEMCYQRTKNFDKL+FLYLITGNL
Sbjct: 644 ECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNL 703
Query: 534 EKLKKMMKIAEIRRDISGQYQAA 556
EKL+KMMKIAEIR+D+SG YQ A
Sbjct: 704 EKLRKMMKIAEIRKDMSGHYQNA 726
Score = 368 (134.6 bits), Expect = 2.5e-213, Sum P(3) = 2.5e-213
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN VY LDREC P VL IDPTEFKFKLALIN KY+EVLH+VRN++LVGQSIIAYLQ+KGY
Sbjct: 565 GNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGY 624
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PEVALHFVKD++TR +LALECGNI
Sbjct: 625 PEVALHFVKDEKTRFSLALECGNI 648
Score = 340 (124.7 bits), Expect = 3.6e-187, Sum P(2) = 3.6e-187
Identities = 74/134 (55%), Positives = 89/134 (66%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CGQ SLAYLTAATHG
Sbjct: 699 ITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLD 758
Query: 648 XXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEEI 706
T DP T+P + P A+LL+PPAP+ +TNWPLLTV+K G I
Sbjct: 759 EEAESLK---ETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFE-G--SI 812
Query: 707 FYAGTGALLCREAD 720
G G L + D
Sbjct: 813 ASKGKGGALAADID 826
Score = 236 (88.1 bits), Expect = 2.5e-213, Sum P(3) = 2.5e-213
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 801 EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V+WS DM+H+ALL+KH + I
Sbjct: 444 DEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVI 503
Query: 861 CNRKME 866
CNRK+E
Sbjct: 504 CNRKLE 509
Score = 169 (64.5 bits), Expect = 2.9e-206, Sum P(3) = 2.9e-206
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 738 VAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVLY 797
+ ++ +TKK+ C+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V++
Sbjct: 427 IKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIW 486
Query: 798 NKGEEIFYAGTGALLCREADHVILFDVQQKRALAQV-KVAKCRHVVWSPDMTHLALLSKH 856
+ ++ + ALL A H I+ ++ AL + + + + W + S H
Sbjct: 487 SA--DMSHV---ALL---AKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYTTSNH 538
Score = 166 (63.5 bits), Expect = 6.1e-206, Sum P(3) = 6.1e-206
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
+TKK+ C+EIFYAGTG LL R+A+ + LFDVQQKR LA VK++K ++V+ + MS V
Sbjct: 434 ITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIWSADMSHV 493
Score = 61 (26.5 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 59/293 (20%), Positives = 116/293 (39%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ I++W M SK V FR ++ + HP + + + I +R
Sbjct: 258 SEDKSIRVWDM--SKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 315
Query: 238 L----NTFRREQERFWSEVIVSNAEDKSI-RLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
N ++RF ++ ++++D ++ +L +K N E VL+
Sbjct: 316 YAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENA-VLLCTRAS 374
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVHNN-----VMYYVKERF-----LHRLDLTNSKDSV 342
NL + +D + + + P ++ + RF +H L + N K+ +
Sbjct: 375 NLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEI 434
Query: 343 VMQLRGGGRIP-AHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKR 401
+++ +P I Y T + +L R+A + + +D+ +++ +A K
Sbjct: 435 TKKVQ----VPNCDEIFYAGTGNLLL---RDAESI--TLFDV-------QQKRTLASVKI 478
Query: 402 STGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMG-NDRQESALCGWPGTG 453
S +W A L H I+I N K E L + N R +S W +G
Sbjct: 479 SKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSG--AWDESG 529
Score = 47 (21.6 bits), Expect = 7.0e-203, Sum P(3) = 7.0e-203
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 869 GLMKSDVINNIDSSLAATEVDV-----QGWGDDADL 899
G + + + A ++D+ +GWG+DA+L
Sbjct: 806 GFFEGSIASKGKGGALAADIDIDTVGTEGWGEDAEL 841
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 1370 (487.3 bits), Expect = 8.7e-186, Sum P(3) = 8.7e-186
Identities = 267/469 (56%), Positives = 341/469 (72%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L KFE+KSARVKG+SFHP RPW+L+SLH+GVIQLWDYRM LLEKFDEH+GPVRGICFH
Sbjct: 3 LLIKFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFH 62
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ QPIFVSGGDDYKIKVWNYKQ++CIFTLLGHLDYIRTTFFHH+YPWI+SASDDQT+RIW
Sbjct: 63 HDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIW 122
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
NWQSRN I +LTGHNHYVMCAQFHPT+D+V SASLDQT+RVWDISGLRKK + PG GA
Sbjct: 123 NWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLRKKQM-PGGGAPS 181
Query: 181 R-----QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW--DMT 233
R Q +L+ D+ V GH V+ V FH + ++VS ++D+ +++W + T
Sbjct: 182 RPTGGQQAELFGQPDAVVKHV--LEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNET 239
Query: 234 KRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
K L++ R S ++I+SN+EDKSIR+WDM KRT L+ FR E ERFWVL
Sbjct: 240 KAWELDSCRGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVL 299
Query: 287 VAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQL 346
AHP+LN+FAAGHD GMVVFK +RERPAY V +N+++YVK + + +LDLT +KD + +L
Sbjct: 300 AAHPSLNMFAAGHDNGMVVFKIQRERPAYCVSDNLVFYVKGQQIRKLDLTTNKDVALCKL 359
Query: 347 RGGGRI--PAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTG 404
R P +S+S+N E + L+T+R N + ++LY + E A K STG
Sbjct: 360 RYPQPFMQPYYSLSFNPAEGTFLLTSRTHNK-DLCAFELYKVASNSDGTTEAACVK-STG 417
Query: 405 ISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTG 453
I+A+WVARNRFAVLD+ + +++L N+ L ++ N + GTG
Sbjct: 418 INALWVARNRFAVLDKAQNVSLRDLTNKELRKLENINTAVDDIFYAGTG 466
Score = 388 (141.6 bits), Expect = 8.1e-179, Sum P(2) = 8.1e-179
Identities = 70/104 (67%), Positives = 87/104 (83%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GYPE+ALHFVKD++TR LA+ECGN++IALEAA+ L++ +VWE LG AL+QGNHQIVEM
Sbjct: 637 GYPEIALHFVKDEKTRFGLAIECGNLEIALEAAKKLDEPAVWEALGETALLQGNHQIVEM 696
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAA 556
YQRTKNF+KL+FLY +TGN +KL KMMKIA+ R D G +Q A
Sbjct: 697 SYQRTKNFEKLSFLYFVTGNTDKLVKMMKIAQARNDAHGHFQTA 740
Score = 275 (101.9 bits), Expect = 7.1e-167, Sum P(2) = 7.1e-167
Identities = 55/105 (52%), Positives = 67/105 (63%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
+TGN +KL KMMKIA+ R D G +Q AL G+V ER+K+L++CGQTSLAYL AATHG
Sbjct: 713 VTGNTDKLVKMMKIAQARNDAHGHFQTALYTGDVEERVKVLRNCGQTSLAYLAAATHGYS 772
Query: 648 XXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLL 692
L + +P V P A+LL PP PVA E NWPLL
Sbjct: 773 AEAEELKAELESRQQ--PIPPVDPNARLLVPPPPVARLEENWPLL 815
Score = 272 (100.8 bits), Expect = 8.7e-186, Sum P(3) = 8.7e-186
Identities = 49/84 (58%), Positives = 71/84 (84%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN +Y L+R+ +P + ID +++KFKLALIN + +EV+++VR++ LVGQSII YL++KGY
Sbjct: 579 GNVLYCLNRDATPVEVPIDNSDYKFKLALINKRIDEVVNMVRSANLVGQSIIGYLEKKGY 638
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PE+ALHFVKD++TR LA+ECGN+
Sbjct: 639 PEIALHFVKDEKTRFGLAIECGNL 662
Score = 213 (80.0 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 42 TLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 101
+LL KF+ V+GI FH +P ++ I++W+Y+ + H +R F
Sbjct: 2 SLLIKFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICF 61
Query: 102 HHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 161
HH+ P +S DD I++WN++ + CI L GH Y+ FH ++SAS DQT+R+
Sbjct: 62 HHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRI 121
Query: 162 WD 163
W+
Sbjct: 122 WN 123
Score = 198 (74.8 bits), Expect = 8.7e-186, Sum P(3) = 8.7e-186
Identities = 51/120 (42%), Positives = 67/120 (55%)
Query: 749 MSSVGCEEIFYAGTGALLCREADHVILFDVQQK--RALAQVKVAKCRHVLYNKGEEIFYA 806
+ S G ++ A + +A +V L D+ K R L + A ++IFYA
Sbjct: 413 VKSTGINALWVARNRFAVLDKAQNVSLRDLTNKELRKLENINTAV---------DDIFYA 463
Query: 807 GTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHICNRKME 866
GTG LL R D + LFDVQQK A VKV+K R+V+WS M ALLSKHTL + NRK+E
Sbjct: 464 GTGMLLLRNDDGLQLFDVQQKIVTASVKVSKVRYVIWSKSMEFAALLSKHTLTLVNRKLE 523
Score = 124 (48.7 bits), Expect = 5.6e-178, Sum P(3) = 5.6e-178
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 696 KKMSSVGC--EEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVTKK 748
+K+ ++ ++IFYAGTG LL R D + LFDVQQK A VKV+K R+V+ K
Sbjct: 448 RKLENINTAVDDIFYAGTGMLLLRNDDGLQLFDVQQKIVTASVKVSKVRYVIWSK 502
Score = 49 (22.3 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 62/281 (22%), Positives = 110/281 (39%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF-HPKSEVIVSNAEDKSIRLWDMTKRT 236
++D+ I++W M K + +FR H N VL HP + + D + ++ +
Sbjct: 270 SEDKSIRVWDMQ--KRTSLHVFR-HENERFWVLAAHPSLNMFAAG-HDNGMVVFKI---- 321
Query: 237 CLNTFRREQERFW-SEVIVSNAEDKSIRLWDMT--KRTCLNTFRREQ---ERFWVLVAHP 290
+RE+ + S+ +V + + IR D+T K L R Q + ++ L +P
Sbjct: 322 -----QRERPAYCVSDNLVFYVKGQQIRKLDLTTNKDVALCKLRYPQPFMQPYYSLSFNP 376
Query: 291 ---TLNLFAAGHDAGMVVFKFER-------ERPAYTVHN---NVMYYVKERF--LHRLDL 335
T L + H+ + F+ + A V + N ++ + RF L +
Sbjct: 377 AEGTFLLTSRTHNKDLCAFELYKVASNSDGTTEAACVKSTGINALWVARNRFAVLDKAQN 436
Query: 336 TNSKDSVVMQLRGGGRI--PAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESER 393
+ +D +LR I I Y T +L RN + + +D+ ++
Sbjct: 437 VSLRDLTNKELRKLENINTAVDDIFYAGTGMLLL---RNDDGLQ--LFDV-------QQK 484
Query: 394 KEVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKNEYL 434
A K S +W FA L HT+ + N K E L
Sbjct: 485 IVTASVKVSKVRYVIWSKSMEFAALLSKHTLTLVNRKLEIL 525
Score = 49 (22.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 41/169 (24%), Positives = 67/169 (39%)
Query: 332 RLDLTNSK-DSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEE 390
+L L N + D VV +R + I Y + + + E + + L + E
Sbjct: 604 KLALINKRIDEVVNMVRSANLVGQSIIGYLEKKGYPEIALHFVKD-EKTRFGLAI----E 658
Query: 391 SERKEVA-DGKRSTGISAVWVARNRFAVLDRNHTIL------IKNL-KNEYLWRM-GN-D 440
E+A + + AVW A A+L NH I+ KN K +L+ + GN D
Sbjct: 659 CGNLEIALEAAKKLDEPAVWEALGETALLQGNHQIVEMSYQRTKNFEKLSFLYFVTGNTD 718
Query: 441 R----QESALCGWPGTGYPEVALHFVKDDRTRLTLALECGNIDIALEAA 485
+ + A G+ + AL + D R+ + CG +A AA
Sbjct: 719 KLVKMMKIAQARNDAHGHFQTAL-YTGDVEERVKVLRNCGQTSLAYLAA 766
Score = 40 (19.1 bits), Expect = 3.3e-35, Sum P(3) = 3.3e-35
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 792 CRHVLYNKGEEIFYAGTGALLCREADHVI-LFDVQQKRAL 830
CR N IF+ +L D I ++D+Q++ +L
Sbjct: 247 CRGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSL 286
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 1371 (487.7 bits), Expect = 7.0e-182, Sum P(3) = 7.0e-182
Identities = 264/453 (58%), Positives = 335/453 (73%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
N QP+FVSGGDDYKIKVWNYK +C+FTLLGHLDYIRT FHHEYPWI+SASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
NWQSR C+ VLTGHNHYVMCA FHP +D+VVSASLDQT+RVWDI LRKK V+P ADD
Sbjct: 121 NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSP---ADD 177
Query: 181 RQIKLWRMNDSKAWEVD-----IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM--T 233
++L +MN VD + GH V+ FHP +IVS A+D+ ++LW M T
Sbjct: 178 I-MRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
Query: 234 KRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
K ++T R S ++IVSN+EDKSIR+WD TKRT L TFRRE +RFW+L
Sbjct: 237 KAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWIL 296
Query: 287 VAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQL 346
HP +NL AAGHD+GM+VFK ERERPA+ + + ++Y K+RFL + + +DS V+ +
Sbjct: 297 AVHPEMNLLAAGHDSGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQRDSQVIPI 356
Query: 347 RGGGRIPA-----HSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA-DGK 400
R G P+ ++SY+ TE+++L+ ++ + +Y+LY+IPK+ R +V D K
Sbjct: 357 RRPGT-PSLNQSPRTLSYSPTENAVLI----CSDLDGGSYELYIIPKDSVGRSDVVQDAK 411
Query: 401 RSTGISAVWVARNRFAVLDRNHT-ILIKNLKNE 432
R TG SAV++ARNRFAVL+++ + +L+KNLKNE
Sbjct: 412 RGTGGSAVFIARNRFAVLEKSTSQVLVKNLKNE 444
Score = 325 (119.5 bits), Expect = 2.9e-172, Sum P(2) = 2.9e-172
Identities = 61/104 (58%), Positives = 80/104 (76%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+PEVALHFV+D+R R LALE GNI +A+ +A + +K W RLG AL QGN IVE
Sbjct: 635 GFPEVALHFVEDERIRFNLALESGNISVAVASATQINEKDHWYRLGVEALRQGNSGIVEF 694
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAA 556
YQ+TKNF++L+FLYLITGNL+KL K+MKIAE++ ++ GQ+ A
Sbjct: 695 AYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFHNA 738
Score = 247 (92.0 bits), Expect = 7.0e-182, Sum P(3) = 7.0e-182
Identities = 51/106 (48%), Positives = 74/106 (69%)
Query: 878 NIDSSLAATEVDVQGWGDDADLGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVL 937
N DS + T +DV + GN ++ LDR+ + I+ TE+ FKL+L+ +Y+ V+
Sbjct: 557 NGDSGIIRT-LDVPIYITKVS-GNTIFCLDRDGKNKAITINATEYIFKLSLLRKRYDHVM 614
Query: 938 HIVRNSRLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
+++NS+L GQ++IAYLQQKG+PEVALHFV+D+R R LALE GNI
Sbjct: 615 SMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI 660
Score = 223 (83.6 bits), Expect = 1.8e-161, Sum P(2) = 1.8e-161
Identities = 52/124 (41%), Positives = 70/124 (56%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNL+KL K+MKIAE++ ++ GQ+ AL LG+V ER+KIL++ G LAY+TA+ HG
Sbjct: 711 ITGNLDKLSKLMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLN 770
Query: 648 XXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEEIF 707
L D +LP + LL PP P+ +WPLL V K + G E
Sbjct: 771 DIAERLATEL--GDNVPSLPEGKTPS-LLMPPTPIM-CGGDWPLLRVMKGIFEGGLESAD 826
Query: 708 YAGT 711
GT
Sbjct: 827 RGGT 830
Score = 185 (70.2 bits), Expect = 7.0e-182, Sum P(3) = 7.0e-182
Identities = 41/96 (42%), Positives = 61/96 (63%)
Query: 776 FDVQQKRALAQVKVAKCRHVLYNKG------EEIFYAGTGALLCREADHVILFDVQQKRA 829
F V +K + +QV V ++ + K + IFYAGTG LLCR D V++FD+QQ+
Sbjct: 426 FAVLEK-STSQVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLV 484
Query: 830 LAQVKVAKCRHVVWSPDMTHLALLSKHTLHICNRKM 865
L +++ R+VVWS DM +ALLSKHT+ I ++K+
Sbjct: 485 LGELQTPFVRYVVWSSDMESVALLSKHTIIIASKKL 520
Score = 132 (51.5 bits), Expect = 2.7e-176, Sum P(3) = 2.7e-176
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 725 FDVQQKRALAQVKVAKCRHVVTKKMS-SVGCEEIFYAGTGALLCREADHVILFDVQQKRA 783
F V +K + +QV V ++ V KK + + IFYAGTG LLCR D V++FD+QQ+
Sbjct: 426 FAVLEK-STSQVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLV 484
Query: 784 LAQVKVAKCRHVLYNKGEE 802
L +++ R+V+++ E
Sbjct: 485 LGELQTPFVRYVVWSSDME 503
Score = 120 (47.3 bits), Expect = 5.0e-175, Sum P(3) = 5.0e-175
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 694 VTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSSV 752
V K + + IFYAGTG LLCR D V++FD+QQ+ L +++ R+VV + M SV
Sbjct: 446 VKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSSDMESV 505
Score = 39 (18.8 bits), Expect = 4.9e-142, Sum P(2) = 4.9e-142
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 625 IKILKSCGQTSLAYL 639
IK + CGQ +AYL
Sbjct: 617 IKNSQLCGQAMIAYL 631
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 1351 (480.6 bits), Expect = 2.1e-180, Sum P(3) = 2.1e-180
Identities = 265/474 (55%), Positives = 340/474 (71%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
N QP+FVSGGDDYKIKVWNYK +C+FTLLGHLDYIRT FHHE PWI+SASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
NWQSR CI VLTGHNHYVMCA FHP +D+VVSASLDQT+RVWDI L+KK+ +P ADD
Sbjct: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASP---ADD 177
Query: 181 RQIKLWRMNDSKAWEVD-----IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM--T 233
++ +MN VD + GH V+ FHP +IVS A+D+ ++LW M T
Sbjct: 178 L-MRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNET 236
Query: 234 KRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
K ++T R S ++IVSN+EDKSIR+WD TKRT + TFRRE +RFW+L
Sbjct: 237 KAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWIL 296
Query: 287 VAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQL 346
HP +NL AAGHD GM+VFK ERERPA+ + + ++Y K+RFL + + KDS V+ +
Sbjct: 297 AVHPEINLLAAGHDNGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQKDSQVIPI 356
Query: 347 RGGGRIPA-----HSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA-DGK 400
R G P+ ++SY+ TE+++L+ ++ + +Y+LY+IPK+ R +V D K
Sbjct: 357 RRPGT-PSLNQSPRTLSYSPTENAVLI----CSDLDGGSYELYIIPKDSVGRSDVVQDAK 411
Query: 401 RSTGISAVWVARNRFAVLDRNHT-ILIKNLKNEYLWRMGNDRQESALCGWPGTG 453
R TG SAV++ARNRFAVL+++ + +L+KNLKNE + + A+ + GTG
Sbjct: 412 RGTGGSAVFIARNRFAVLEKSTSQVLVKNLKNEVVKKSSLPIPTDAIF-YAGTG 464
Score = 330 (121.2 bits), Expect = 2.7e-174, Sum P(3) = 2.7e-174
Identities = 73/160 (45%), Positives = 105/160 (65%)
Query: 398 DGK-RSTGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPE 456
DGK R+ I+A + A+L + + ++ +KN L G ++ + G+PE
Sbjct: 586 DGKNRAITINATEYIF-KLALLRKKYDHVMSMIKNSQL--CG----QAMIAYLQQKGFPE 638
Query: 457 VALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQR 516
VALHFV+D+R R LALE GNI +A+ +A + +K W RLG AL QGN +IVE YQ+
Sbjct: 639 VALHFVEDERIRFNLALESGNISVAVASATEINEKDHWYRLGVEALRQGNSRIVEFAYQQ 698
Query: 517 TKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAA 556
TKNF++L+FLYLITGNL+KL K+MKIAE++ ++ GQ+ A
Sbjct: 699 TKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFHNA 738
Score = 254 (94.5 bits), Expect = 2.1e-180, Sum P(3) = 2.1e-180
Identities = 53/106 (50%), Positives = 74/106 (69%)
Query: 878 NIDSSLAATEVDVQGWGDDADLGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVL 937
N DS + T +DV + GN ++ LDR+ + I+ TE+ FKLAL+ KY+ V+
Sbjct: 557 NGDSGIIRT-LDVPIYITKVS-GNTIFCLDRDGKNRAITINATEYIFKLALLRKKYDHVM 614
Query: 938 HIVRNSRLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
+++NS+L GQ++IAYLQQKG+PEVALHFV+D+R R LALE GNI
Sbjct: 615 SMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI 660
Score = 222 (83.2 bits), Expect = 6.7e-163, Sum P(3) = 6.7e-163
Identities = 55/133 (41%), Positives = 75/133 (56%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNL+KL K+MKIAE++ ++ GQ+ AL LG+V ER+KIL++ G LAY+TA+ HG
Sbjct: 711 ITGNLDKLSKLMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLT 770
Query: 648 XXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEEIF 707
L D +LP + LL PP+P+ +WPLL V K + G E
Sbjct: 771 DIAERLAIEL--GDNVPSLPEGKTPS-LLMPPSPIM-CGGDWPLLRVMKGIFEGGLES-- 824
Query: 708 YAGTGALLCREAD 720
A GA+ E D
Sbjct: 825 -ANRGAVDEEEED 836
Score = 184 (69.8 bits), Expect = 2.1e-180, Sum P(3) = 2.1e-180
Identities = 41/96 (42%), Positives = 61/96 (63%)
Query: 776 FDVQQKRALAQVKVAKCRHVLYNKG------EEIFYAGTGALLCREADHVILFDVQQKRA 829
F V +K + +QV V ++ + K + IFYAGTG LLCR D V++FD+QQ+
Sbjct: 426 FAVLEK-STSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLV 484
Query: 830 LAQVKVAKCRHVVWSPDMTHLALLSKHTLHICNRKM 865
L +++ R+VVWS DM +ALLSKHT+ I ++K+
Sbjct: 485 LGELQTPFVRYVVWSNDMESVALLSKHTIIIASKKL 520
Score = 137 (53.3 bits), Expect = 1.9e-175, Sum P(3) = 1.9e-175
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 725 FDVQQKRALAQVKVAKCRHVVTKKMS-SVGCEEIFYAGTGALLCREADHVILFDVQQKRA 783
F V +K + +QV V ++ V KK S + + IFYAGTG LLCR D V++FD+QQ+
Sbjct: 426 FAVLEK-STSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLV 484
Query: 784 LAQVKVAKCRHVLYNKGEE 802
L +++ R+V+++ E
Sbjct: 485 LGELQTPFVRYVVWSNDME 503
Score = 124 (48.7 bits), Expect = 4.4e-174, Sum P(3) = 4.4e-174
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 694 VTKKMS-SVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-TKKMSS 751
V KK S + + IFYAGTG LLCR D V++FD+QQ+ L +++ R+VV + M S
Sbjct: 445 VVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSNDMES 504
Query: 752 V 752
V
Sbjct: 505 V 505
Score = 50 (22.7 bits), Expect = 2.7e-174, Sum P(3) = 2.7e-174
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 864 KMEGAGLMKSDVINNIDSSLAATEVDVQ--GWGDDADL 899
K + G+ +D+ +D + A E D + GWG D DL
Sbjct: 847 KFDVDGMENTDIEAILDGAEAGEEEDDEEGGWGLDLDL 884
Score = 40 (19.1 bits), Expect = 1.0e-143, Sum P(3) = 1.0e-143
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 612 YQAALLLGEVGERIKILKS---CGQTSLAYL 639
++ ALL + + ++K+ CGQ +AYL
Sbjct: 601 FKLALLRKKYDHVMSMIKNSQLCGQAMIAYL 631
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 1142 (407.1 bits), Expect = 3.0e-169, Sum P(4) = 3.0e-169
Identities = 224/450 (49%), Positives = 309/450 (68%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
ML KFETK++RVKGLSFHP RPWIL+SLH+G I L+DYR+ TLLEKFDEHEGPVRGI FH
Sbjct: 1 MLYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QP+FVSGGDDYKIKVWNYKQR+C+FTL GH DYIR+ FH E PWI+S+SDD IRIW
Sbjct: 61 MTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK--NVAPGMGA 178
NWQSR CI L GHNHYVM A FHP DD+VVSASLDQTIR+WDISGL+KK V P
Sbjct: 121 NWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMTTVKPYREN 180
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
D +++ + + + GH V+ FHP IVS ++D ++LW M +
Sbjct: 181 DPMRLQDELFGTDISVRLSL-EGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMND-PIV 238
Query: 239 NTFRREQER-----FW--SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
+TFR F ++I+SN+EDK+IR+WD+ K++ ++ RR+ +RFW L +HP
Sbjct: 239 DTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPN 298
Query: 292 LNLFAAGHDAGMVVFKFERERPAYTVHNNV-MYYVKERFLHRLDLTNSKDSVVMQLRGGG 350
NLFAAGHD+GM+VFK ERERP + + + ++++K++ + D + + +
Sbjct: 299 QNLFAAGHDSGMIVFKLERERPLFVQNGDSGVFFLKKKNFNSFDFQAGRTVSLFHI---S 355
Query: 351 RIPAHS----ISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGIS 406
++P+++ +SYN TE +ILV++ + E +Y LY IP ++S + K+ TG++
Sbjct: 356 KLPSNNGTQTMSYNQTERAILVSS----DAEGGSYHLYKIPPKDSN---TVNTKKGTGVA 408
Query: 407 AVWVARNRFAVLDRNHTILIKNLKNEYLWR 436
A++V R+RFAVLD+ + ++I++L+NE + R
Sbjct: 409 AIFVGRDRFAVLDKGNNVVIRDLENEEIKR 438
Score = 306 (112.8 bits), Expect = 3.0e-169, Sum P(4) = 3.0e-169
Identities = 57/88 (64%), Positives = 70/88 (79%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GYP+V +HFVKDDRTR LAL+ GNIDIAL +A++L+DK W RLG AL QGN+Q+VEM
Sbjct: 626 GYPDV-VHFVKDDRTRFNLALDAGNIDIALSSAKILDDKDCWNRLGVEALKQGNYQVVEM 684
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMM 540
Y RT FD+L+FLYL+ GNL LKKM+
Sbjct: 685 AYSRTSEFDRLSFLYLLVGNLSTLKKMI 712
Score = 244 (91.0 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 46/83 (55%), Positives = 64/83 (77%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGYP 960
N+V+ +DRE ++ ID TE+ KL+L+ Y +V+ I+R +RLVG++IIAYLQ+KGYP
Sbjct: 569 NKVFAIDREFKNRIIEIDTTEYVLKLSLLQQNYNQVMTILRENRLVGKAIIAYLQKKGYP 628
Query: 961 EVALHFVKDDRTRLTLALECGNI 983
+V +HFVKDDRTR LAL+ GNI
Sbjct: 629 DV-VHFVKDDRTRFNLALDAGNI 650
Score = 210 (79.0 bits), Expect = 3.0e-169, Sum P(4) = 3.0e-169
Identities = 51/122 (41%), Positives = 68/122 (55%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
+ GNL LKKM+ DI ++ +L LG+V ERIKIL+ G LAY+TA+ HG
Sbjct: 701 LVGNLSTLKKMISYES--SDIMSRFHFSLYLGDVEERIKILQEAGLHQLAYITASIHGLT 758
Query: 648 XXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVA--EAETNWPLLTVTKKMSSVGCEE 705
NL T+D + LP + ++ LL PP+P+ E NWPLLT TK +S V E
Sbjct: 759 EKAESIG-NLITSDGKSQLPQLPKQSYLLVPPSPINCNPNELNWPLLTTTKSVSDVMGEN 817
Query: 706 IF 707
F
Sbjct: 818 RF 819
Score = 130 (50.8 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 34/134 (25%), Positives = 75/134 (55%)
Query: 744 VVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVLYNKGEEI 803
V TKK G IF + + ++V++ D++ + ++K +C+ + + + I
Sbjct: 399 VNTKK--GTGVAAIFVGRDRFAVLDKGNNVVIRDLENE----EIK--RCQ-IPFTI-DWI 448
Query: 804 FYAGT-GALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHICN 862
+ +G+ G +L + D + +FD+QQK+ L +++V R+V+WS D ++A L++ + + N
Sbjct: 449 YPSGSPGTILIQSEDKIHMFDIQQKKMLCEIQVHGVRYVIWSKDRNYVAFLTRDFIVLAN 508
Query: 863 RKMEGAGLMKSDVI 876
+K+E ++ V+
Sbjct: 509 KKLEQICMIHETVL 522
Score = 78 (32.5 bits), Expect = 2.5e-124, Sum P(3) = 2.5e-124
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 706 IFYAGT-GALLCREADHVILFDVQQKRALAQVKVAKCRHVVTKK 748
I+ +G+ G +L + D + +FD+QQK+ L +++V R+V+ K
Sbjct: 448 IYPSGSPGTILIQSEDKIHMFDIQQKKMLCEIQVHGVRYVIWSK 491
Score = 37 (18.1 bits), Expect = 3.0e-169, Sum P(4) = 3.0e-169
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 706 IFYAGTGALLCREADHVILFDVQQKRA 732
IF A +L C + +L +Q+K A
Sbjct: 962 IFMATRSSLGCNASTPSLLMPIQRKSA 988
Score = 37 (18.1 bits), Expect = 3.0e-169, Sum P(4) = 3.0e-169
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 757 IFYAGTGALLCREADHVILFDVQQKRA 783
IF A +L C + +L +Q+K A
Sbjct: 962 IFMATRSSLGCNASTPSLLMPIQRKSA 988
Score = 37 (18.1 bits), Expect = 3.0e-169, Sum P(4) = 3.0e-169
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 803 IFYAGTGALLCREADHVILFDVQQKRA 829
IF A +L C + +L +Q+K A
Sbjct: 962 IFMATRSSLGCNASTPSLLMPIQRKSA 988
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 1148 (409.2 bits), Expect = 3.3e-159, Sum P(3) = 3.3e-159
Identities = 225/449 (50%), Positives = 300/449 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE+KS+R KG++FHPKRPWIL SLH+ IQLWDYRM TL+++F+EH+GPVRGI FH
Sbjct: 1 MLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QP+FVSGGDDYKIKVWNY+ R+C+FTL GHLDY+RT FFH E PWILSASDDQTIRIW
Sbjct: 61 PTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIW 120
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGAD 179
NWQ+R+ IC +TGHNHYVMCAQFHPT+D++ SASLDQ++R+WDISGLRKK+ AP M +
Sbjct: 121 NWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGLRKKHSAPTTMSFE 180
Query: 180 DRQIKLWRMNDSKAWEVD-----IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-- 232
D+ + D + GH V+ V FHP +IVS +D+ I+LW M
Sbjct: 181 DQMARANNAQADMFGNTDAVVKFVLEGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWRMSD 240
Query: 233 TKR----TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWV 285
TK TC F+ + ++I+S EDK+IR WD+ KRT + +F+R+ +RFWV
Sbjct: 241 TKAWEVDTCRGHFQNASACLFHPHQDLILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWV 300
Query: 286 LVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYV-KERFLHRLDLTNSKDSVVM 344
+ AHP +NLFAAGHD G++VFK ERERPA V+ N ++Y+ KE+ + D + +S M
Sbjct: 301 IAAHPEINLFAAGHDTGVMVFKLERERPASAVYQNQLFYITKEKHVKSFDFAKNVESPSM 360
Query: 345 QLRGGGRIPAHSISYNATEHSILVTTRNANN-FENSTYDLYMIPKEESERKEVADGKRST 403
++ + + ++ + + Y+L +P++ + E D KR
Sbjct: 361 LSLR--KLGSPWVPPRTLSYNPAERAVLVTSPADGGVYELINLPRDATGAIEPTDVKRGQ 418
Query: 404 GISAVWVARNRFAVLDR-NHTILIKNLKN 431
SAV+VARNRFAV + N + IK+L N
Sbjct: 419 ASSAVFVARNRFAVFSQANQQVDIKDLSN 447
Score = 334 (122.6 bits), Expect = 1.2e-149, Sum P(2) = 1.2e-149
Identities = 70/145 (48%), Positives = 98/145 (67%)
Query: 412 RNRFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTL 471
R + A++ RN+ +++ +K L +G +S + GYPE+AL FV+D +TR L
Sbjct: 604 RFKLALVKRNYDEMLQIIKTSSL--VG----QSIISYLQKKGYPEIALQFVQDPQTRFEL 657
Query: 472 ALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITG 531
ALECGN+D+A+E AR L+ ++W RLG AL GNHQIVEM YQ+ +NFDKL+FLYL G
Sbjct: 658 ALECGNLDVAIEMARELDRPNLWNRLGIEALAHGNHQIVEMAYQKQRNFDKLSFLYLSIG 717
Query: 532 NLEKLKKMMKIAEIRRDISGQYQAA 556
+ EKL +M KIAE R D + ++Q A
Sbjct: 718 DQEKLSRMAKIAEHRGDFTSRFQNA 742
Score = 290 (107.1 bits), Expect = 3.3e-159, Sum P(3) = 3.3e-159
Identities = 62/136 (45%), Positives = 85/136 (62%)
Query: 854 SKH-TLHICNRKMEGAGLMKSDVINNIDSSLAATEVDVQGWGDDADL-----GNQVYYLD 907
S H T+ I + + AG++ +N++ SL + + D G VY LD
Sbjct: 529 SLHETIRIKSAAWDDAGVLLYSTLNHVKYSLLNGDNGIIRTLDQTVYLVKVKGRSVYCLD 588
Query: 908 RECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGYPEVALHFV 967
R P L IDPTE++FKLAL+ Y+E+L I++ S LVGQSII+YLQ+KGYPE+AL FV
Sbjct: 589 RNAKPRTLEIDPTEYRFKLALVKRNYDEMLQIIKTSSLVGQSIISYLQKKGYPEIALQFV 648
Query: 968 KDDRTRLTLALECGNI 983
+D +TR LALECGN+
Sbjct: 649 QDPQTRFELALECGNL 664
Score = 153 (58.9 bits), Expect = 1.6e-130, Sum P(2) = 1.6e-130
Identities = 35/102 (34%), Positives = 55/102 (53%)
Query: 590 GNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXXXX 649
G+ EKL +M KIAE R D + ++Q A+ G+V +RI++ K LAYLTA HG
Sbjct: 717 GDQEKLSRMAKIAEHRGDFTSRFQNAIYRGDVEDRIQMFKEVDLYPLAYLTAKAHGLTEE 776
Query: 650 XXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPL 691
+ ++ +LPT+ Q+ +P VA + +WP+
Sbjct: 777 AESILEVVGLSEDQVSLPTIEAPPQIPQPI--VATYKASWPV 816
Score = 150 (57.9 bits), Expect = 3.3e-159, Sum P(3) = 3.3e-159
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 802 EIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHIC 861
+I++ GTG+LL V+LFD+QQK+ LA++ V+ ++VVWS D + ALLSKH + I
Sbjct: 461 DIYFGGTGSLLFITPTSVVLFDIQQKKQLAELAVSGVKYVVWSNDGLYAALLSKHNVTIV 520
Query: 862 NRKME 866
+ +E
Sbjct: 521 TKTLE 525
Score = 111 (44.1 bits), Expect = 4.2e-155, Sum P(3) = 4.2e-155
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 731 RALAQVKVAKCRHVVTKKMSS-VGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKV 789
+A QV + + TK + G +I++ GTG+LL V+LFD+QQK+ LA++ V
Sbjct: 435 QANQQVDIKDLSNSTTKSIKPPAGTTDIYFGGTGSLLFITPTSVVLFDIQQKKQLAELAV 494
Query: 790 AKCRHVLY-NKGEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVW 843
+ ++V++ N G YA ALL + ++ ++Q +L + + + W
Sbjct: 495 SGVKYVVWSNDG---LYA---ALLSKHNVTIVTKTLEQVSSLHET--IRIKSAAW 541
Score = 101 (40.6 bits), Expect = 4.8e-154, Sum P(3) = 4.8e-154
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 693 TVTKKMSS-VGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV 745
+ TK + G +I++ GTG+LL V+LFD+QQK+ LA++ V+ ++VV
Sbjct: 448 STTKSIKPPAGTTDIYFGGTGSLLFITPTSVVLFDIQQKKQLAELAVSGVKYVV 501
Score = 41 (19.5 bits), Expect = 9.0e-31, Sum P(3) = 9.0e-31
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 141 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
A F + V + +Q + + D+S K++ P G D
Sbjct: 422 AVFVARNRFAVFSQANQQVDIKDLSNSTTKSIKPPAGTTD 461
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 1100 (392.3 bits), Expect = 7.8e-152, Sum P(3) = 7.8e-152
Identities = 222/454 (48%), Positives = 292/454 (64%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE++S+R KG++FHP +PWIL+SLHNG IQLWDYRM TLL++FD H+GPVRGI FH
Sbjct: 3 MLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFH 62
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QP+FVSGGDDYK+ VWNYK RK +F+L GH+DY+R FHHEYPWILS SDDQTIRIW
Sbjct: 63 PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIW 122
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGAD 179
NWQSRNCI +LTGH+HYVMCA FHP++D++VSASLDQT+RVWDISGLR KN AP M +
Sbjct: 123 NWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLE 182
Query: 180 DRQIKLWRM--ND----SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
D+ + ND + A + GH V+ FHP +I+S +D+ ++LW MT
Sbjct: 183 DQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMT 242
Query: 234 KR------TCLNTFRREQERFW---SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
TC F + E+I+S +EDK+IR+WD+ +RT + TFRR+ +RFW
Sbjct: 243 ASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFW 302
Query: 285 VLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVM 344
+ HP LNLFAA HD+G++VFK ERERPA+ ++ N + YV + S D +
Sbjct: 303 FITVHPKLNLFAAAHDSGVMVFKLERERPAHALNINTLLYVNKE-----KSIVSYDLLRA 357
Query: 345 QLRGGGRIPAHSISYNATEHSILVTTRN-----ANNFENSTYDLYMIPKEESERKEVADG 399
Q + H S S+ ++ +N Y+L + S + D
Sbjct: 358 QSTTVASVK-HLGSAWLPPRSLSYNPAEKVALLTSSADNGVYELVNV-SSRSNSLPLKDN 415
Query: 400 KRSTGISAVWVARNRFAVLDRN-HTILIKNLKNE 432
+ G A++VARNRFAV R+ TI IK+L N+
Sbjct: 416 IKGPGDDAIFVARNRFAVFSRSDQTIEIKDLSNK 449
Score = 291 (107.5 bits), Expect = 7.1e-143, Sum P(3) = 7.1e-143
Identities = 56/102 (54%), Positives = 72/102 (70%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GYPE+AL FV+D TR LALECGN++ ALE AR ++ VW RL A+ GNH+I E+
Sbjct: 640 GYPEIALQFVEDPSTRFELALECGNLETALELARTIDRPEVWSRLASDAMSYGNHKIAEI 699
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQ 554
+Q+ + F+KL+FLYLITGN EKL+KM IAE R D +Q
Sbjct: 700 TFQKLRYFEKLSFLYLITGNAEKLQKMAIIAEKRNDTLSLFQ 741
Score = 279 (103.3 bits), Expect = 7.8e-152, Sum P(3) = 7.8e-152
Identities = 52/84 (61%), Positives = 65/84 (77%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
GN V+ L+R P IDPTE+ FKLAL+ YE+VLH+++NS LVGQ+IIAYLQ+KGY
Sbjct: 582 GNMVFALNRAAEPVSFEIDPTEYLFKLALLRKDYEQVLHLIQNSNLVGQAIIAYLQKKGY 641
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PE+AL FV+D TR LALECGN+
Sbjct: 642 PEIALQFVEDPSTRFELALECGNL 665
Score = 166 (63.5 bits), Expect = 1.0e-129, Sum P(3) = 1.0e-129
Identities = 42/106 (39%), Positives = 53/106 (50%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGN EKL+KM IAE R D +Q +L L EV RI IL+ G +AYLTA ++G
Sbjct: 716 ITGNAEKLQKMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYPIAYLTAKSNGLE 775
Query: 648 XXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAET-NWPLL 692
+ + LP++ P PV E T NWPLL
Sbjct: 776 EKAQQILSHCNKTEEEIKLPSL---GSAFTTPVPVNETYTHNWPLL 818
Score = 139 (54.0 bits), Expect = 7.8e-152, Sum P(3) = 7.8e-152
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 788 KVAKCRHVLYNKGEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDM 847
KV K L K +IF+AG G +L A V LFD+QQK+ ++ + ++VVWS D
Sbjct: 449 KVTKTIQ-LPEKTRDIFFAGMGHVLLSTATQVHLFDLQQKKIVSSFNANRVKYVVWSNDN 507
Query: 848 THLALLSKHTLHICNRKME 866
+ ALL KH ++I + +E
Sbjct: 508 SQAALLGKHYVYIVKKNLE 526
Score = 80 (33.2 bits), Expect = 1.3e-145, Sum P(3) = 1.3e-145
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 736 VKVAKCRHVVTKKMS-SVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRH 794
+++ + VTK + +IF+AG G +L A V LFD+QQK+ ++ + ++
Sbjct: 441 IEIKDLSNKVTKTIQLPEKTRDIFFAGMGHVLLSTATQVHLFDLQQKKIVSSFNANRVKY 500
Query: 795 VLYN 798
V+++
Sbjct: 501 VVWS 504
Score = 79 (32.9 bits), Expect = 1.7e-145, Sum P(3) = 1.7e-145
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 705 EIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVV 745
+IF+AG G +L A V LFD+QQK+ ++ + ++VV
Sbjct: 462 DIFFAGMGHVLLSTATQVHLFDLQQKKIVSSFNANRVKYVV 502
Score = 47 (21.6 bits), Expect = 2.2e-127, Sum P(3) = 2.2e-127
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 925 KLALINHKYEEVLHIVRNSRLVGQ--SIIAYLQQKG-YP 960
K+A+I K + L + +NS + + S I L+Q G YP
Sbjct: 725 KMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYP 763
Score = 42 (19.8 bits), Expect = 7.1e-143, Sum P(3) = 7.1e-143
Identities = 39/177 (22%), Positives = 72/177 (40%)
Query: 744 VVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHV-LYNKGEE 802
VV + VG +EIF + L ADH+ D + + +V L + E
Sbjct: 893 VVDDASAFVGADEIFLWKRNSPLA--ADHIAAGDFESAMKILNKQVGAINFSPLKTRFLE 950
Query: 803 IFYAGTGAL-LCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMT-HLALLSKHTLHI 860
I+ A L D ++ + V++ A+ A P +T +LA + H LH
Sbjct: 951 IYTASRVYLPTISGLDPLVSY-VRRNAETAERSQAL-------PFITRNLASIKSHELHE 1002
Query: 861 CNRKMEGAGLMKSDVINNIDSSLAATEVDVQGWGDDADLGNQVYYLDRECSPHVLRI 917
R ++ ++++ + LA T V ++AD ++ L EC +++ +
Sbjct: 1003 AYRLVKANKILEAQICFRSIIYLALTTV--ANSEEEAD---EISALIDECCRYIVAL 1054
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 768 (275.4 bits), Expect = 1.1e-144, Sum P(4) = 1.1e-144
Identities = 144/252 (57%), Positives = 184/252 (73%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE+KS+R KG++FHPKRPW L SLH+ IQLWDYRM TL+++F++H GPVR + FH
Sbjct: 3 MLTKFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFH 62
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QP+FVSGGDDY IKVW+ RKCIFTL GHLDYIR FHH+ PWI+S SDDQTIRIW
Sbjct: 63 PTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIW 122
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP--GMGA 178
NWQ+R I LTGHNHYVM AQFHP++D++VSASLDQT+RVWDISGLRKK+ AP + A
Sbjct: 123 NWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLRKKHSAPTSSVRA 182
Query: 179 DDRQIKLWRMNDSKAW-EVD-----IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
+ Q++ ++ + ++ + GH V+ FHP +IVS +D+ ++LW M
Sbjct: 183 FEDQLQRQQLPQQDIFGNINAVVKYVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRM 242
Query: 233 --TKRTCLNTFR 242
TK ++T R
Sbjct: 243 SDTKAWEVDTCR 254
Score = 416 (151.5 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 97/293 (33%), Positives = 154/293 (52%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ +FE V+ + FHP +P +S + I++W + + H +RG+ FH
Sbjct: 45 LIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFH 104
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ P +S DD I++WN++ R+ I L GH Y+ + FH I+SAS DQT+R+W
Sbjct: 105 HDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVW 164
Query: 121 NWQS-RNCICVLTGHNHYV---MCAQFHPTDDIV--VSASLDQTIRVWDISGLRKKNVAP 174
+ R T + Q P DI ++A + + D G+ + P
Sbjct: 165 DISGLRKKHSAPTSSVRAFEDQLQRQQLPQQDIFGNINAVVKYVLEGHD-KGVNYASFHP 223
Query: 175 GM-----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRL 229
+ DDR +KLWRM+D+KAWEVD RGH NV +FHP ++I+S ++DK+IR+
Sbjct: 224 TLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRV 283
Query: 230 WDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 282
WD+ KR + FRRE +RFW +I S+ +I L+ + + F+ E+ER
Sbjct: 284 WDLNKRVPVKQFRREHDRFW--LIASHP---TISLFAACHDSGIMVFKLERER 331
Score = 389 (142.0 bits), Expect = 1.1e-144, Sum P(4) = 1.1e-144
Identities = 92/269 (34%), Positives = 151/269 (56%)
Query: 198 IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM--TKRTCLNTFRREQERFWS----- 250
+ GH V+ FHP +IVS +D+ ++LW M TK ++T R S
Sbjct: 208 VLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHP 267
Query: 251 --EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKF 308
++I+S ++DK+IR+WD+ KR + FRRE +RFW++ +HPT++LFAA HD+G++VFK
Sbjct: 268 HQDLILSVSDDKTIRVWDLNKRVPVKQFRREHDRFWLIASHPTISLFAACHDSGIMVFKL 327
Query: 309 ERERPAYTVHNNVMYYVK-ERFLHRLDLTNSKDSVVM-QLRGGGRIPA--HSISYNATEH 364
ERERPA+T+ N +YYV E+ + D+ ++S+ M L+ G+ + ++SYN +++
Sbjct: 328 ERERPAHTIFQNKLYYVNGEKQIQTFDINKQENSLPMLSLKKIGKTWSFMRTLSYNQSDN 387
Query: 365 SILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNRFAVLDRN-HT 423
S+LV +N Y L +PK + E D ++ A +++RNRF ++ T
Sbjct: 388 SVLVVHGEG---DNGNYALITLPKHVTGAIEPTDIRQGEANFAAFISRNRFVTFVKSTKT 444
Query: 424 ILIKNLKNEYLWRMGNDRQ-ESALCGWPG 451
+ +K+L N + D L G PG
Sbjct: 445 LQVKDLNNNITKTVQLDSSIVDVLPGSPG 473
Score = 294 (108.6 bits), Expect = 7.9e-104, Sum P(2) = 7.9e-104
Identities = 64/144 (44%), Positives = 94/144 (65%)
Query: 412 RNRFAVLDRNHTILIKNLKNEYLWRMGNDRQESALCGW-PGTGYPEVALHFVKDDRTRLT 470
R + A++++N +++ +KN L +G + + G+ G+PEVALHFV+D TR
Sbjct: 609 RFKRALVNKNFGEVLRLIKNSTL--VGQN-----IIGYLQKKGFPEVALHFVQDPETRFE 661
Query: 471 LALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLIT 530
LALEC N+ +ALE A++L + +WE+LG AL+QGN +IVE YQ+ +FDKL+FLYL
Sbjct: 662 LALECSNLQVALEQAKILNNNQIWEKLGEEALLQGNIEIVEYIYQQLHHFDKLSFLYLYK 721
Query: 531 GNLEKLKKMMKIAEIRRDISGQYQ 554
G+ E+L KM IA+ R D S Q
Sbjct: 722 GDDERLDKMSTIAQHRDDTSSLVQ 745
Score = 265 (98.3 bits), Expect = 1.1e-144, Sum P(4) = 1.1e-144
Identities = 58/151 (38%), Positives = 89/151 (58%)
Query: 839 RHVVWSPDMTHLALLSKH-TLHICNRKMEGAGLMKSDVINNIDSSLAATEVDVQGWGDDA 897
+H + D + S H T+ I + + G++ +N+I +L + + ++
Sbjct: 519 KHTITIADKDLKLITSMHETIRIKSAAWDDTGVLLYSTLNHIKYTLLNGDNGIIKTLENT 578
Query: 898 DL-----GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIA 952
GN +Y L+R+ + IDPTE++FK AL+N + EVL +++NS LVGQ+II
Sbjct: 579 LYITKVQGNLIYCLNRQGQVETITIDPTEYRFKRALVNKNFGEVLRLIKNSTLVGQNIIG 638
Query: 953 YLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
YLQ+KG+PEVALHFV+D TR LALEC N+
Sbjct: 639 YLQKKGFPEVALHFVQDPETRFELALECSNL 669
Score = 122 (48.0 bits), Expect = 1.8e-124, Sum P(3) = 1.8e-124
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 802 EIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHIC 861
++ G +L +A VI +DVQQ++ LA++ V ++V WS + +LALLSKHT+ I
Sbjct: 466 DVLPGSPGRILLVKAHSVINYDVQQRKELAEISVNNVKYVSWSSNGQYLALLSKHTITIA 525
Query: 862 NRKME 866
++ ++
Sbjct: 526 DKDLK 530
Score = 104 (41.7 bits), Expect = 1.4e-122, Sum P(3) = 1.4e-122
Identities = 29/102 (28%), Positives = 44/102 (43%)
Query: 590 GNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXXXX 649
G+ E+L KM IA+ R D S Q L ++ +R ++ G LAY A ++G
Sbjct: 722 GDDERLDKMSTIAQHRDDTSSLVQNTLYNNDIKKRCQVYIQNGMLPLAYTLAKSNGLNEL 781
Query: 650 XXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPL 691
++ + LP + L P P+ E NWPL
Sbjct: 782 AEQILQEANISEKDVELPELGDVVPL---PKPIGEPVGNWPL 820
Score = 67 (28.6 bits), Expect = 1.1e-144, Sum P(4) = 1.1e-144
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 692 LTVTKKMSSVGCEEIFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHV 744
+T T ++ S ++ G +L +A VI +DVQQ++ LA++ V ++V
Sbjct: 454 ITKTVQLDS-SIVDVLPGSPGRILLVKAHSVINYDVQQRKELAEISVNNVKYV 505
Score = 66 (28.3 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 23/89 (25%), Positives = 40/89 (44%)
Query: 246 ERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMV- 304
+R W+ +VS +I+LWD T ++ F + HPT LF +G D +
Sbjct: 22 KRPWA--LVS-LHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIK 78
Query: 305 VFKFERERPAYTVHNNVMYYVKERFLHRL 333
V+ + +T++ ++ Y F H L
Sbjct: 79 VWSLNTRKCIFTLNGHLDYIRGVSFHHDL 107
Score = 47 (21.6 bits), Expect = 1.3e-86, Sum P(3) = 1.3e-86
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 385 MIPKEESERKEVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKNEYLWRMGND-RQE 443
+I + +RKE+A+ + W + ++ L HTI I + + + M R +
Sbjct: 483 VINYDVQQRKELAEISVNNVKYVSWSSNGQYLALLSKHTITIADKDLKLITSMHETIRIK 542
Query: 444 SALCGWPGTG 453
SA W TG
Sbjct: 543 SA--AWDDTG 550
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 1056 (376.8 bits), Expect = 3.1e-142, Sum P(3) = 3.1e-142
Identities = 209/449 (46%), Positives = 290/449 (64%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE+KS R KG++FHP RPW+L +L + IQLWDYRM TLL +F++HEGPVRG+ FH
Sbjct: 3 MLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
QPIFVS GDDY IKVW+ KC++TL GHLDY+RT FFH E PWI+SASDDQTIRIW
Sbjct: 63 PTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIW 122
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
NWQ+R I LTGHNH+VMCAQFHPTDD++VSASLD+TIR+WDISGLRK++ APG + +
Sbjct: 123 NWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFE 182
Query: 181 RQIKLWR-MNDSKAWEVD---IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM--TK 234
Q+ + + D + I GH V+ FHP +IVS ++D+ ++LW M TK
Sbjct: 183 EQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATK 242
Query: 235 RTCLNTFRREQERFWSEV-------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
++T R S + I+S EDK++R+WD+ KRT + F+RE +RFW++
Sbjct: 243 AWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIA 302
Query: 288 AHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVK-ERFLHRLDLTNSKDSV-VMQ 345
AHP +NLF A HD+G++VFK +RERP +H N +++V E+ + + S+
Sbjct: 303 AHPHINLFGAAHDSGIMVFKLDRERPCSFIHQNQLFFVNAEKQIQSFNFQKRVASLPYAS 362
Query: 346 LRGGGRIPAHSI-SYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTG 404
L+G G+ P + S + V AN + L ++PK+ E + TG
Sbjct: 363 LKGIGQ-PWDAFRSISYNPSQHSVLVNEANG----KFALVILPKQPVGAVEPTSVTQDTG 417
Query: 405 ISAVWVARNRFAVLDRN-HTILIKNLKNE 432
A +V RNRF V ++N ++ +++L+N+
Sbjct: 418 NFATFVGRNRFVVYNKNTESVEVRSLENK 446
Score = 282 (104.3 bits), Expect = 4.4e-137, Sum P(3) = 4.4e-137
Identities = 54/97 (55%), Positives = 68/97 (70%)
Query: 452 TGYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVE 511
+GYPE+AL FV+D R LALE GN+D+AL+ A+ L D S WERL AL QGN + E
Sbjct: 636 SGYPEIALQFVQDPHIRFDLALEYGNLDVALDEAKKLNDSSTWERLIQEALAQGNASLAE 695
Query: 512 MCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRD 548
M YQ +FDKL+FLYL+TG++ KL KM IA+ R D
Sbjct: 696 MIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTRED 732
Score = 242 (90.2 bits), Expect = 3.1e-142, Sum P(3) = 3.1e-142
Identities = 46/84 (54%), Positives = 62/84 (73%)
Query: 900 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQKGY 959
G VY L+RE +L IDPTE++FK AL+N + EVL ++++S LVGQ+II+YLQ+ GY
Sbjct: 579 GKLVYCLNREGEIEILTIDPTEYRFKKALVNKNFPEVLRLIKDSNLVGQNIISYLQKSGY 638
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
PE+AL FV+D R LALE GN+
Sbjct: 639 PEIALQFVQDPHIRFDLALEYGNL 662
Score = 129 (50.5 bits), Expect = 3.1e-142, Sum P(3) = 3.1e-142
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 803 IFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHICN 862
I AG G++L VIL+DVQQ + ++Q+ V ++V WS D ++AL+SKHT+ +
Sbjct: 460 IVAAGPGSVLVIHPREVILYDVQQGKKVSQLAVKNVKYVSWSLDGQYVALMSKHTITLAT 519
Query: 863 RKME 866
+K+E
Sbjct: 520 KKLE 523
Score = 104 (41.7 bits), Expect = 2.5e-118, Sum P(3) = 2.5e-118
Identities = 26/104 (25%), Positives = 39/104 (37%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
+TG++ KL KM IA+ R D ER I G LAY A +G
Sbjct: 713 VTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANGDE 772
Query: 648 XXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPL 691
+ + TLP + ++ P +++ WPL
Sbjct: 773 AAASAFLEQAEVDEQDVTLPDQMDASNFVQRPV-ISKPLEKWPL 815
Score = 71 (30.1 bits), Expect = 3.9e-136, Sum P(3) = 3.9e-136
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 725 FDVQQKRALAQVKVAKCRHVVTKKMS-SVGCEEIFYAGTGALLCREADHVILFDVQQKRA 783
F V K V+V + VT+ + I AG G++L VIL+DVQQ +
Sbjct: 428 FVVYNKNT-ESVEVRSLENKVTRNIKVEETVRTIVAAGPGSVLVIHPREVILYDVQQGKK 486
Query: 784 LAQVKVAKCRHVLYN 798
++Q+ V ++V ++
Sbjct: 487 VSQLAVKNVKYVSWS 501
Score = 66 (28.3 bits), Expect = 1.3e-135, Sum P(3) = 1.3e-135
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 706 IFYAGTGALLCREADHVILFDVQQKRALAQVKVAKCRHV 744
I AG G++L VIL+DVQQ + ++Q+ V ++V
Sbjct: 460 IVAAGPGSVLVIHPREVILYDVQQGKKVSQLAVKNVKYV 498
Score = 40 (19.1 bits), Expect = 4.4e-137, Sum P(3) = 4.4e-137
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 409 WVARNRFAVLDRNHTILIKNLKNEYLWRMGND-RQESALCGWPGTG 453
W ++ L HTI + K E + M R +SA W TG
Sbjct: 500 WSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSA--AWDETG 543
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 408 (148.7 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 101/327 (30%), Positives = 172/327 (52%)
Query: 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV 67
+S RVKG+ FHP PWIL++L++G + +W Y ++++ F+ + PVR F ++ V
Sbjct: 12 RSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRAGRFIARKNWIV 71
Query: 68 SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR-N 126
G DD++++++NY + I + H DYIR+ H P++L+ASDD TI++W+W+
Sbjct: 72 CGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWK 131
Query: 127 CICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL 185
C+ V GH+HYVM +P D + SA LD+T+++W + G+ L
Sbjct: 132 CVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSL------------GSPHANFTL 179
Query: 186 WRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE--VIVSNAEDKSIRLWDMTKRTCLNTFRR 243
+A E +G N+V ++P+++ +++ ++DK++++WD T + + T
Sbjct: 180 ------EAHET---KG-VNHVD---YYPQADKPYLLTTSDDKTVKVWDYTTKALIATLEG 226
Query: 244 EQER-----FWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQ------ERFWVLVAHP 290
+ E VI+S +ED +I++W NT+R EQ ER W +
Sbjct: 227 HTSNVSFACYHPELPVIISGSEDGTIKIWHA------NTYRLEQSLSYGLERAWCVSYQR 280
Query: 291 TLNLFAAGHDAGMVVFKFERERPAYTV 317
A G D G VV K RE PA ++
Sbjct: 281 GKQGVALGFDDGAVVVKMGREEPAVSM 307
Score = 219 (82.2 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 47/185 (25%), Positives = 98/185 (52%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH 60
+ FE ++ ++ HP +P++L++ + I+LWD+ ++ ++ H V G+ +
Sbjct: 90 IASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGLAIN 149
Query: 61 NQQP-IFVSGGDDYKIKVWNYKQRKCIFTL-------LGHLDYIRTTFFHHEYPWILSAS 112
+ F S D +K+W+ FTL + H+DY + + P++L+ S
Sbjct: 150 PKDTNTFASACLDRTVKIWSLGSPHANFTLEAHETKGVNHVDY----YPQADKPYLLTTS 205
Query: 113 DDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKN 171
DD+T+++W++ ++ I L GH V A +HP +++S S D TI++W + R +++
Sbjct: 206 DDKTVKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKIWHANTYRLEQS 265
Query: 172 VAPGM 176
++ G+
Sbjct: 266 LSYGL 270
Score = 180 (68.4 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 42/168 (25%), Positives = 82/168 (48%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ WI+ + +++++Y + + F+ H +R I H
Sbjct: 47 IIKTFELTDVPVRAGRFIARKNWIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVH 106
Query: 61 NQQPIFVSGGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++++ KC+ GH Y+ + + SA D+T++
Sbjct: 107 PTQPFVLTASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVK 166
Query: 119 IWNWQSRNCICVLTGHNHY-VMCAQFHPTDD--IVVSASLDQTIRVWD 163
IW+ S + L H V ++P D +++ S D+T++VWD
Sbjct: 167 IWSLGSPHANFTLEAHETKGVNHVDYYPQADKPYLLTTSDDKTVKVWD 214
Score = 159 (61.0 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 53/185 (28%), Positives = 83/185 (44%)
Query: 358 SYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNRFAV 417
S N + + T ++F+ Y L +P++ R VAD ++AV A + V
Sbjct: 539 STNRLNYLVGDQTYTISHFDQPMYVLGYLPRDG--RVYVAD----KDVNAVSFALSLSMV 592
Query: 418 LDRNHTILIKN---LKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLALE 474
T++++ L E L + D+ G GY E+AL D R LAL
Sbjct: 593 --EYQTVVLRGDMELAAELLQDIPQDQMNKVARFLEGQGYKELALEVATDQEHRFELALA 650
Query: 475 CGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNLE 534
N+DIALE AR + W+ +G AAL N + + C+ K+ L L+ +GN E
Sbjct: 651 LNNLDIALEIARAANAEHKWKVVGDAALSAWNLSLAQECFISAKDVGSLLLLHTASGNRE 710
Query: 535 KLKKM 539
L+ +
Sbjct: 711 GLQAL 715
Score = 64 (27.6 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 18/85 (21%), Positives = 39/85 (45%)
Query: 902 QVYYLDRECSPHVLRIDPTEFKFKLALINHKYE---EVLHIVRNSRLVGQSIIAYLQQKG 958
+VY D++ + + + +++ ++ E E+L + ++ + +L+ +G
Sbjct: 572 RVYVADKDVNAVSFALSLSMVEYQTVVLRGDMELAAELLQDIPQDQM--NKVARFLEGQG 629
Query: 959 YPEVALHFVKDDRTRLTLALECGNI 983
Y E+AL D R LAL N+
Sbjct: 630 YKELALEVATDQEHRFELALALNNL 654
Score = 64 (27.6 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 17/81 (20%), Positives = 37/81 (45%)
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDD 148
L + ++ FH PWIL+ + IW++++++ I + V +F +
Sbjct: 9 LFARSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRAGRFIARKN 68
Query: 149 IVVSASLDQTIRVWDISGLRK 169
+V S D +R+++ + K
Sbjct: 69 WIVCGSDDFQLRIYNYNTSEK 89
Score = 61 (26.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD---YRMNTLL 44
++ E ++ V +HP+ P I+S +G I++W YR+ L
Sbjct: 220 LIATLEGHTSNVSFACYHPELPVIISGSEDGTIKIWHANTYRLEQSL 266
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 383 (139.9 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 86/319 (26%), Positives = 154/319 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K + + RVK + FHP PW+++S +NG + +W+Y TL+ FD ++ P+R F ++
Sbjct: 9 KLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARK 68
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
FV G DD++++V+NY + + H DYIR H P++L++SDD TI+ +NW
Sbjct: 69 NWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWD 128
Query: 124 -SRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
S C+ GH+ YVM +P D + S+ LD T++VW G N + A DR
Sbjct: 129 MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSF-GSSVANFT--LQAHDR 185
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
+ + I G N + + K+ V + ++ +F
Sbjct: 186 GVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNV------------SF 233
Query: 242 RREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDA 301
+F +I+S +ED ++++W + + ++ +R W + + L G D
Sbjct: 234 AFFHSKF--PIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDN 291
Query: 302 GMVVFKFERERPAYTVHNN 320
G++ F R+ P+ T+ ++
Sbjct: 292 GLITFSLGRDEPSVTMDSS 310
Score = 178 (67.7 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ F+ ++ +F ++ W + + +++++Y + +F+ H +R + H
Sbjct: 48 LVRSFDINDVPIRACAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVH 107
Query: 61 NQQPIFVSGGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK +N+ KC+ T GH Y+ + + + S+ D T++
Sbjct: 108 PTQPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVK 167
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W++ S L H+ V ++P D +++A D I+VWD
Sbjct: 168 VWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWD 214
Score = 151 (58.2 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
GY E AL D R LAL+ +DIA + A+ L+D W LG AAL + + +
Sbjct: 629 GYKEAALELSGDSVQRFELALDAQRLDIASQIAQELDDPLKWRSLGDAALNAWDFVLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C+++ K++ L LY T N E LK++ ++ +
Sbjct: 689 CFEKGKDYGSLVLLYTATNNHEGLKELSQLTK 720
Score = 47 (21.6 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 953 YLQQKGYPEVALHFVKDDRTRLTLALE 979
+L + GY E AL D R LAL+
Sbjct: 624 FLSRLGYKEAALELSGDSVQRFELALD 650
Score = 46 (21.3 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 589 TGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATH 644
T N E LK++ ++ + + + + + L + E + IL S + A L AAT+
Sbjct: 706 TNNHEGLKELSQLTKSTKINNTAFICSWLTNQPAECVNILTSTQRYPEANLFAATY 761
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 420 (152.9 bits), Expect = 3.5e-42, Sum P(2) = 3.5e-42
Identities = 121/446 (27%), Positives = 211/446 (47%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+ ++S RVK + HP PW+L +L+NG + + +Y +++ F+ + PVR F ++
Sbjct: 10 RLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
++G DD +I+V+NY + + + H DY+R H P +L++SDD I++WNW+
Sbjct: 70 NWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWE 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQ 182
C V GH HYVM F+P D+ +++ + DR
Sbjct: 130 KMWACQRVFEGHTHYVMQIVFNPKDNNTFASA-----------------------SLDRT 166
Query: 183 IKLWRMNDSKAWEVDIFRGHYNNVSCV-LFHPKSE-VIVSNAEDKSIRLWDMTKRTCLNT 240
+K+W++ + A GH V+CV +H + ++S A+D+ +++WD +TC+ T
Sbjct: 167 VKVWQLGSNFANFT--LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
Query: 241 FRREQER-----FWSE--VIVSNAEDKSIRLWDM-TKR--TCLNTFRREQERFWVLVAHP 290
+ F E ++++ +ED ++R+W T R TCLN ER W + +
Sbjct: 225 LEGHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYRLETCLNY---GFERVWTISSMR 281
Query: 291 TLNLFAAGHDAGMVVFKFERERPAYT--VHNNVMYYVKERFLHRLDLTNSKDSVVMQLRG 348
N A G+D G ++ K RE PA + V + + + K + +++L D +++
Sbjct: 282 GTNNVALGYDEGSIIIKVGREEPAMSMDVVGSKIIWAKHSEMQQVNLKTIADGT--EIKD 339
Query: 349 GGRIPAHSISYNATEHSILVTTRNANN-FENSTYD-LYMIPKEESERKEVADGKRSTGIS 406
G R+P + A E N N F D Y+I + R + A G
Sbjct: 340 GERLPVATKDMGACEIYPQTIAHNPNGRFVVVCGDGEYIIYTSMALRNK-AFGSAQ---E 395
Query: 407 AVWVAR-NRFAVLDRNHTI-LIKNLK 430
VW N +A+ + N T+ L +N K
Sbjct: 396 FVWALESNEYAIRENNGTVRLFRNFK 421
Score = 202 (76.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
M+ FE V+ F ++ WIL+ + I++++Y + F+ H +R I H
Sbjct: 49 MVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP+ ++ DD IK+WN+ K C GH Y+ F+ + SAS D+T++
Sbjct: 109 PTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S L GH V C ++ D ++S + D+ +++WD
Sbjct: 169 VWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
Score = 111 (44.1 bits), Expect = 3.5e-42, Sum P(2) = 3.5e-42
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ AL D + LAL+ G+++IAL+ AR E+ W +L A + N +V+
Sbjct: 631 GFKSQALQVSTDADHKFDLALQIGDLEIALKLARESENSQKWSQLADVASSKNNMSLVKE 690
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLK 537
C Q+ + L L +G+ + L+
Sbjct: 691 CMQKANDLSGLLLLSTASGDAQLLE 715
Score = 56 (24.8 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 16/84 (19%), Positives = 42/84 (50%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIA-YLQQKGY 959
N++Y D+E + + + +++ A++ +E ++ ++ +A +L+++G+
Sbjct: 573 NRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEHRTRVAHFLEKQGF 632
Query: 960 PEVALHFVKDDRTRLTLALECGNI 983
AL D + LAL+ G++
Sbjct: 633 KSQALQVSTDADHKFDLALQIGDL 656
Score = 42 (19.8 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 688 NWPLLTVTKKMSSVGCEEIFYAGTGALLCREAD 720
+W L + +++ V + +F+ +G+L+C D
Sbjct: 453 DWETLQLVRRIE-VQPKNVFWNESGSLVCLATD 484
Score = 37 (18.1 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 462 VKDDRTRLTLALEC----GNIDIALEAARVLEDKSVWERLGHAALMQGNHQI 509
V + ++L EC ++ L + D + E +G A QG+H +
Sbjct: 678 VASSKNNMSLVKECMQKANDLSGLLLLSTASGDAQLLEVVGAAGSAQGHHNL 729
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 417 (151.9 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 108/337 (32%), Positives = 166/337 (49%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ +F T+S RVKG+ FHP PWIL++L+NG I++W Y N+L++ E PVR F
Sbjct: 5 VVKQFSTRSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRAGKFI 64
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
++ V G DD++I+V+NY + + H DYIR+ H P+IL++SDD TI++W
Sbjct: 65 ARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLW 124
Query: 121 NWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKK-----NVA 173
NW GH HYVM F+P D + SA LD+T+++W + + + A
Sbjct: 125 NWDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEA 184
Query: 174 PGMGADD---RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
G+ D + K + + S + ++ Y SCV E +SN S +
Sbjct: 185 KGVNYVDYYPQADKPYLITSSDDKTIKVW--DYQTKSCVA---TLEGHLSNV---SFAI- 235
Query: 231 DMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
F E +IVS +ED +IR W+ + ER W + P
Sbjct: 236 ----------FHPELP-----IIVSGSEDGTIRFWNSNTFKLEKSINYSLERAWCIGILP 280
Query: 291 TLNLFAAGHDAGMVVFKFERERPAYTVH-NNVMYYVK 326
N+ AAG D+G V+ K E P +++ NN + Y K
Sbjct: 281 KSNVIAAGFDSGFVIIKLGSEEPLFSMDSNNKLIYAK 317
Score = 88 (36.0 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 35/146 (23%), Positives = 65/146 (44%)
Query: 423 TILIKNLKNEY---LWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLALECGNID 479
TI ++NL EY + R + GY ++ +D ++ L+L GN+
Sbjct: 656 TITLENLSEEYSQLISRFTKTELNQLSRFFEKLGYLALSFSLSQDFDSKFQLSLSTGNLK 715
Query: 480 IALE--AARVLEDKSV-------WERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLIT 530
A + +A+ E S+ W++LG AL + N ++ + + K++ L L T
Sbjct: 716 QAYDLLSAQEKETPSLSLANSTKWKKLGDLALNKWNIKLAQESFWLAKDYSSLLLLLSST 775
Query: 531 GNLEKLKKMMKIAEIRRDISGQYQAA 556
N +L K+ ++ E + G+Y A
Sbjct: 776 QNKSQLIKLAEVCESK----GKYNIA 797
Score = 47 (21.6 bits), Expect = 4.5e-35, Sum P(2) = 4.5e-35
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 589 TGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHG 645
T N +L K+ ++ E + + +Q+ L+G+VG+ +L + + + A + +G
Sbjct: 775 TQNKSQLIKLAEVCESKGKYNIAWQSWWLVGDVGKCFDLLITSERYTEAVIFGKNYG 831
Score = 41 (19.5 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 9/55 (16%), Positives = 27/55 (49%)
Query: 929 INHKYEEVLHIVRNSRLVGQSIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
++ +Y +++ + L + + ++ GY ++ +D ++ L+L GN+
Sbjct: 662 LSEEYSQLISRFTKTEL--NQLSRFFEKLGYLALSFSLSQDFDSKFQLSLSTGNL 714
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 397 (144.8 bits), Expect = 8.0e-39, Sum P(3) = 8.0e-39
Identities = 104/337 (30%), Positives = 164/337 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
KF +S RVK + HP PWIL+SL++G + +W+Y+ T+++ FD E PVR F ++
Sbjct: 225 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 284
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD I+V+NY I H DYIR H P++LS+SDD I++W+W+
Sbjct: 285 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 344
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
C + GH+HYVM F+P D + SASLD+TI++W++ G N D
Sbjct: 345 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTL-----DA 398
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSI--RLWDMTKRTCLN 239
+K +N VD F G + + V + + KS L T
Sbjct: 399 HLK--GVNC-----VDYFTGG-DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV 450
Query: 240 TFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGH 299
+F E +I++ +ED ++R+W T NT ER W + G+
Sbjct: 451 SFHPELP-----IIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGY 505
Query: 300 DAGMVVFKFERERPAYTVHNN-VMYYVKERFLHRLDL 335
D G ++ K RE P ++ N+ + + K +H +++
Sbjct: 506 DEGSIMVKLGREIPVASMDNSGKIIWAKHNEIHTVNI 542
Score = 190 (71.9 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 45/167 (26%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
M+ F+ V+ F ++ W+++ + I++++Y ++ F+ H +R + H
Sbjct: 264 MVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVH 323
Query: 61 NQQPIFVSGGDDYKIKVWNYKQR-KCIFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIR 118
P +S DD IK+W++++ C GH Y+ + TF + SAS D+TI+
Sbjct: 324 PTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 383
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
IWN S + L H V C + D +++ S D T +VWD
Sbjct: 384 IWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 430
Score = 116 (45.9 bits), Expect = 8.0e-39, Sum P(3) = 8.0e-39
Identities = 29/114 (25%), Positives = 51/114 (44%)
Query: 431 NEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLED 490
NE L + + S G E AL D R LA++ G + +A + A ++
Sbjct: 822 NEVLPSIPKEHHNSVAHFLESRGMTEDALEVATDPDYRFELAIQLGRLAVAKDIAVEAQN 881
Query: 491 KSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
+S W++LG A+ G + E C + + L LY G+ + + K+ +A+
Sbjct: 882 ESKWKQLGELAMSSGKLDMAEECMRHAMDLSGLLLLYSSLGDADGMMKLAALAK 935
Score = 38 (18.4 bits), Expect = 8.0e-39, Sum P(3) = 8.0e-39
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 598 MMKIAEIRRDISGQYQAALL----LGEVGERIKILKSCGQTSLAYLTAATH 644
MMK+A + ++ G+ A L LG+V + + +L + A L A ++
Sbjct: 927 MMKLAALAKE-QGKNNVAFLCLFMLGQVEDCLHLLVESNRIPEAALMARSY 976
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 392 (143.0 bits), Expect = 5.6e-38, Sum P(2) = 5.6e-38
Identities = 101/348 (29%), Positives = 169/348 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
++G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W+
Sbjct: 70 NWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWE 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW + G
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVN 189
Query: 182 QIKLWRMND-----SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
I + D S A + + Y N +CV + + +A++ S
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCV------QTLEGHAQNVS---------- 233
Query: 237 CLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA 296
C+N F E +I++ +ED ++R+W + +T ER W + N A
Sbjct: 234 CVN-FHPELP-----IIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNSVA 287
Query: 297 AGHDAGMVVFKFERERPAYTVHNN-VMYYVKERFLHRLDLTNSKDSVV 343
G+D G ++ K RE PA ++ N + + K + + +L D+ +
Sbjct: 288 LGYDEGSIIIKLGREEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEI 335
Score = 190 (71.9 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 41/167 (24%), Positives = 82/167 (49%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 49 LVKTFEVCDLPVRASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W+++++ C GH Y+ + + SAS D+TI+
Sbjct: 109 PTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH+ V C ++ D ++S + D+ +++WD
Sbjct: 169 VWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 101 (40.6 bits), Expect = 5.6e-38, Sum P(2) = 5.6e-38
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALAVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVAKLAEGAE 720
Score = 49 (22.3 bits), Expect = 6.3e-32, Sum P(3) = 6.3e-32
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 953 YLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
+L+++G+ + AL D R LAL+ G +
Sbjct: 624 FLEKQGFKQQALAVSTDPEHRFELALQLGEL 654
Score = 39 (18.8 bits), Expect = 6.3e-32, Sum P(3) = 6.3e-32
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K A +Q
Sbjct: 466 KHIFWSDSGELVCIATEESFFILRYLSEKVAASQ 499
Score = 39 (18.8 bits), Expect = 6.3e-32, Sum P(3) = 6.3e-32
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K A +Q
Sbjct: 466 KHIFWSDSGELVCIATEESFFILRYLSEKVAASQ 499
Score = 39 (18.8 bits), Expect = 6.3e-32, Sum P(3) = 6.3e-32
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K A +Q
Sbjct: 466 KHIFWSDSGELVCIATEESFFILRYLSEKVAASQ 499
Score = 37 (18.1 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 918 DPTEFKFKLAL----INHKYEEVLHIVRNSRLVGQSIIAYLQ-QKGYPEVALHFVKDDRT 972
DP E +F+LAL + Y+ + + + +A + Q G + LH +D
Sbjct: 640 DP-EHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 698
Query: 973 RLTLALECGN 982
L LA GN
Sbjct: 699 LLLLATASGN 708
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 364 (133.2 bits), Expect = 6.0e-38, Sum P(3) = 6.0e-38
Identities = 96/365 (26%), Positives = 170/365 (46%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQ 62
K T+S RVK + HP PWIL+SL++G + +W+Y +++ F+ PVR F +
Sbjct: 10 KLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAK 69
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ V+G DD I+V+NY + I + H DYIR H P+ILS+SDD I++W++
Sbjct: 70 KQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDY 129
Query: 123 QSR-NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ + V GH+HYVM ++P D +Q + + L D+
Sbjct: 130 EKGWSNTQVFEGHSHYVMSIAWNPKDT-------NQ----FATASL------------DK 166
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE--VIVSNAEDKSIRLWDMTKRTCLN 239
+K+W +N GH ++ V + E ++S A+DK +++WD +TC+
Sbjct: 167 TVKVWSINSPHPHFT--LEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQ 224
Query: 240 TFRREQER-----FWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
T + E+ I+S +ED +++LW + T W +
Sbjct: 225 TLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTYRLERTLNYGMGFVWSMNFLRGS 284
Query: 293 NLFAAGHDAGMVVFKFERERPAYTV-HNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGR 351
N G+D G VV K + +P ++ + Y K + + ++N ++ +++ G +
Sbjct: 285 NFIGLGYDDGTVVLKIGKNKPPVSMDQGGKVIYAKH---NEIRISNISSTLEQEVQDGEK 341
Query: 352 IPAHS 356
+ S
Sbjct: 342 LSLQS 346
Score = 249 (92.7 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 59/193 (30%), Positives = 101/193 (52%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH 60
+ FE + ++ + HP P+ILSS + I+LWDY + + F+ H V I ++
Sbjct: 93 IKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWN 152
Query: 61 NQQPI-FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
+ F + D +KVW+ FTL GH I + F E P+++S +DD+ +
Sbjct: 153 PKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLV 212
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM 176
+IW++QS+ C+ L GH++ V +HP +++S S D T+++W S R ++ + GM
Sbjct: 213 KIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTYRLERTLNYGM 272
Query: 177 GADDRQIKLWRMN 189
G +W MN
Sbjct: 273 GF------VWSMN 279
Score = 224 (83.9 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 63/272 (23%), Positives = 117/272 (43%)
Query: 45 EKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHH 103
+K V+ + H +P ++ D + +WNY+ + + + + + +RT F
Sbjct: 9 KKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIA 68
Query: 104 EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
+ WI++ SDD IR++N+ + I H Y+ C HPT ++S+S D I++WD
Sbjct: 69 KKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWD 128
Query: 164 ISGLRKKNVAPGMGADDRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPKSEVIVSNA 222
K W +F GH + V + ++PK + A
Sbjct: 129 YE--------------------------KGWSNTQVFEGHSHYVMSIAWNPKDTNQFATA 162
Query: 223 E-DKSIRLWDMTKRTCLNTFRREQE-----RFWS----EVIVSNAEDKSIRLWDMTKRTC 272
DK++++W + T ++ ++S ++S A+DK +++WD +TC
Sbjct: 163 SLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTC 222
Query: 273 LNTFRREQERFWVLVAHPTLNLFAAGHDAGMV 304
+ T V+ HP L L +G + G V
Sbjct: 223 VQTLEGHSNNVSVVCYHPELPLILSGSEDGTV 254
Score = 135 (52.6 bits), Expect = 6.0e-38, Sum P(3) = 6.0e-38
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 416 AVLDRNHTILIKNLKN--EYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLAL 473
+V+ +IL +L+ L ++ D++ S GY E AL D R LA+
Sbjct: 592 SVISYQTSILRGDLEGAERILPKIPQDQRNSIAHFLESQGYKEKALEVSTDLDHRFELAI 651
Query: 474 ECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNL 533
+ N+D+A E A + ++ ++ LG AL G ++ E C ++ ++ L LY TG++
Sbjct: 652 QLENLDVAHEIALKSDSETKFKHLGDLALSIGEIKLAENCLKKAEDLPGLLLLYTSTGDI 711
Query: 534 EKLKKMMKIAE 544
E +K + K++E
Sbjct: 712 EGMKMLAKLSE 722
Score = 134 (52.2 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 31/153 (20%), Positives = 80/153 (52%)
Query: 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWN 79
++P+++S + ++++WDY+ T ++ + H V +C+H + P+ +SG +D +K+W+
Sbjct: 199 EKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWH 258
Query: 80 YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVM 139
+ TL + ++ + F +I DD T+ + +++ + + G V+
Sbjct: 259 SSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKIGKNKPPVSMDQGGK--VI 316
Query: 140 CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV 172
A+ + +S++L+Q ++ + L+ K++
Sbjct: 317 YAKHNEIRISNISSTLEQEVQDGEKLSLQSKDL 349
Score = 53 (23.7 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 949 SIIAYLQQKGYPEVALHFVKDDRTRLTLALECGNI 983
SI +L+ +GY E AL D R LA++ N+
Sbjct: 622 SIAHFLESQGYKEKALEVSTDLDHRFELAIQLENL 656
Score = 43 (20.2 bits), Expect = 6.0e-38, Sum P(3) = 6.0e-38
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 589 TGNLEKLKKMMKIAEIRRDISGQYQAALLL-GEVGERIKILKSCGQTSLAYLTAATH 644
TG++E +K + K++E + + + LLL + + L + G S A A T+
Sbjct: 708 TGDIEGMKMLAKLSEEKGQTNISFICNLLLPNSLLNCLNTLCASGDYSEAAFMARTY 764
Score = 38 (18.4 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 366 ILVTTRNANNFENST 380
I TT N NN N+T
Sbjct: 874 ITTTTTNTNNNTNNT 888
Score = 37 (18.1 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 9/53 (16%), Positives = 26/53 (49%)
Query: 809 GALL-CREADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
G+LL + D + + + +++ +++ WS + +LA+++ + I
Sbjct: 437 GSLLGVKSNDTLCFYSWDSADIIRRIEKTSPKNIFWSENGDYLAIVTDKSTFI 489
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 382 (139.5 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 101/348 (29%), Positives = 168/348 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW + G
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 189
Query: 182 QIKLWRMND-----SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
I + D S A + + Y N +CV + + +A++ S
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCV------QTLEGHAQNVS---------- 233
Query: 237 CLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA 296
C + F E +I++ +ED ++R+W + +T ER W + + N A
Sbjct: 234 CAS-FHPELP-----IIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 297 AGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVV 343
G+D G ++ K RE PA ++ N + + K + + +L D+ +
Sbjct: 288 LGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEI 335
Score = 189 (71.6 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++ K+ C GH Y+ + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH V C ++ D ++S + D+ +++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 104 (41.7 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVNKLAEGAE 720
Score = 52 (23.4 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGQSIIAYLQQK 957
N++Y D+E + + + +++ A++ + ++VL + + + +L+++
Sbjct: 571 NRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQ 628
Query: 958 GYPEVALHFVKDDRTRLTLALECGNI 983
G+ + AL D R LAL+ G +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGEL 654
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 181 RQIKLWRMNDSK 192
R +KLWR N SK
Sbjct: 768 RVVKLWRENLSK 779
Score = 37 (18.1 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 382 (139.5 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 98/343 (28%), Positives = 167/343 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW + G
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 189
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
I + D K + + G + + ++ +++ V E + + +C TF
Sbjct: 190 CIDYYSGGD-KPY---LISGADDRL-VKIWDYQNKTCVQTPEGHAQNV------SCA-TF 237
Query: 242 RREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDA 301
E +I++ +ED ++R+W + +T ER W + + N A G+D
Sbjct: 238 HPELP-----IIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDE 292
Query: 302 GMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVV 343
G ++ K RE PA ++ N + + K + + +L D+ +
Sbjct: 293 GSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEI 335
Score = 189 (71.6 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++ K+ C GH Y+ + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH V C ++ D ++S + D+ +++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 104 (41.7 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVNKLAEGAE 720
Score = 52 (23.4 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGQSIIAYLQQK 957
N++Y D+E + + + +++ A++ + ++VL + + + +L+++
Sbjct: 571 NRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQ 628
Query: 958 GYPEVALHFVKDDRTRLTLALECGNI 983
G+ + AL D R LAL+ G +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGEL 654
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 181 RQIKLWRMNDSK 192
R +KLWR N SK
Sbjct: 768 RVVKLWRENLSK 779
Score = 37 (18.1 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 384 (140.2 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 101/348 (29%), Positives = 169/348 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW + G
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 189
Query: 182 QIKLWRMND-----SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
I + D S A + + Y N +CV + + +A++ S
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCV------QTLEGHAQNVS---------- 233
Query: 237 CLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA 296
C++ F E +I++ +ED ++R+W + +T ER W + + N A
Sbjct: 234 CVS-FHPELP-----IIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 297 AGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVV 343
G+D G ++ K RE PA ++ N + + K + + +L D+ +
Sbjct: 288 LGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEI 335
Score = 189 (71.6 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++ K+ C GH Y+ + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH V C ++ D ++S + D+ +++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 102 (41.0 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALAVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 689 CLHHAQDYGGLLLLATASGNANMVNKLAEGAE 720
Score = 52 (23.4 bits), Expect = 2.6e-31, Sum P(3) = 2.6e-31
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGQSIIAYLQQK 957
N++Y D+E + + + +++ A++ + ++VL + + + +L+++
Sbjct: 571 NRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFGMADKVLPTIPKEQRT--RVAHFLEKQ 628
Query: 958 GYPEVALHFVKDDRTRLTLALECGNI 983
G+ + AL D R LAL+ G +
Sbjct: 629 GFKQQALAVSTDPEHRFELALQLGEL 654
Score = 38 (18.4 bits), Expect = 2.6e-31, Sum P(3) = 2.6e-31
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K + AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVSSAQ 499
Score = 38 (18.4 bits), Expect = 2.6e-31, Sum P(3) = 2.6e-31
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K + AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVSSAQ 499
Score = 38 (18.4 bits), Expect = 2.6e-31, Sum P(3) = 2.6e-31
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K + AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVSSAQ 499
Score = 37 (18.1 bits), Expect = 9.5e-30, Sum P(3) = 9.5e-30
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 918 DPTEFKFKLAL----INHKYEEVLHIVRNSRLVGQSIIAYLQ-QKGYPEVALHFVKDDRT 972
DP E +F+LAL + Y+ + + + +A + Q G + LH +D
Sbjct: 640 DP-EHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 698
Query: 973 RLTLALECGN 982
L LA GN
Sbjct: 699 LLLLATASGN 708
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 292 (107.8 bits), Expect = 3.2e-37, Sum P(2) = 3.2e-37
Identities = 55/162 (33%), Positives = 95/162 (58%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F + S RVK + FH ++PWIL++LH G +Q+W+Y TL++ + E R F +++
Sbjct: 103 FVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKN 162
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ DD +I++++ + I H D+IR+ H P+++SASDD+ IR+W+W++
Sbjct: 163 WIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWEN 222
Query: 125 R-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDI 164
H HY+M +P D ++ VS SLD+T++VW +
Sbjct: 223 EWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKL 264
Score = 200 (75.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 47/166 (28%), Positives = 79/166 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ E + F ++ WI ++ + I+++D +L+ +F H +R + H
Sbjct: 141 LVKAMEVSEKSTRAAKFIHRKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVH 200
Query: 61 NQQPIFVSGGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIR 118
P +S DD KI+VW+++ + H YI + E P +S S D+T++
Sbjct: 201 PTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLK 260
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+W + IC L GH V C +F T +VS S D +I VWDI
Sbjct: 261 VWKLGEQESICTLEGHEKGVNCVEFL-TGGRIVSGSDDCSICVWDI 305
Score = 197 (74.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 48/166 (28%), Positives = 87/166 (52%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICF 59
++ +F S ++ L+ HP P+++S+ + I++WD+ +E+ F EH + I
Sbjct: 183 LINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAV 242
Query: 60 HNQQP-IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + P +FVSG D +KVW +++ I TL GH + F I+S SDD +I
Sbjct: 243 NPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFLTGGR-IVSGSDDCSIC 301
Query: 119 IWNWQSRNCICVL-TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
+W+ Q++ CI L H + V P ++S + D T+++W+
Sbjct: 302 VWDIQTQKCIETLKNAHKNNVTFVT--PFKTWIISGAEDSTVKIWN 345
Score = 183 (69.5 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 38/123 (30%), Positives = 63/123 (51%)
Query: 41 NTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 100
N F H V+ + FH+++P ++ +++WNY + + + R
Sbjct: 97 NRAAPNFVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAK 156
Query: 101 FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 160
F H WI +ASDDQ IRI++ ++ + I T H+ ++ HPT ++SAS D+ IR
Sbjct: 157 FIHRKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIR 216
Query: 161 VWD 163
VWD
Sbjct: 217 VWD 219
Score = 147 (56.8 bits), Expect = 3.2e-37, Sum P(2) = 3.2e-37
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ +K+W++ + ++ + GH V+CV F IVS ++D SI +WD+ +
Sbjct: 253 GSLDKTLKVWKLGEQES--ICTLEGHEKGVNCVEFLTGGR-IVSGSDDCSICVWDIQTQK 309
Query: 237 CLNTFRREQERFWSEV------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
C+ T + + + V I+S AED ++++W+ + E+ R W + A
Sbjct: 310 CIETLKNAHKNNVTFVTPFKTWIISGAEDSTVKIWNSQTFSLEKELNFEKGRAWCVAAGK 369
Query: 291 TLNLFAAGHDAGMV 304
+ + A G D+G V
Sbjct: 370 S-DAIAVGFDSGAV 382
Score = 130 (50.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 42/154 (27%), Positives = 71/154 (46%)
Query: 1 MLTKFETKSARVKGLSFHPKRP--WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
M +F+ + + ++ +P+ P ++ SL +++W + + HE V +
Sbjct: 226 MEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDK-TLKVWKLGEQESICTLEGHEKGVNCVE 284
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTI 117
F I VSG DD I VW+ + +KCI TL H + + TF WI+S ++D T+
Sbjct: 285 FLTGGRI-VSGSDDCSICVWDIQTQKCIETLKNAHKNNV--TFVTPFKTWIISGAEDSTV 341
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 151
+IWN Q+ + L C +D I V
Sbjct: 342 KIWNSQTFSLEKELNFEKGRAWCVAAGKSDAIAV 375
Score = 113 (44.8 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 27/107 (25%), Positives = 57/107 (53%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKS-EVIVSNAEDKSIRLWDMTKRT 236
+DDR+I++W + E + F+ H + + + +P+ E+ VS + DK++++W + ++
Sbjct: 210 SDDRKIRVWDWENEWRMEQE-FQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQE 268
Query: 237 CLNTFRREQ------ERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
+ T + E IVS ++D SI +WD+ + C+ T +
Sbjct: 269 SICTLEGHEKGVNCVEFLTGGRIVSGSDDCSICVWDIQTQKCIETLK 315
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 382 (139.5 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 101/348 (29%), Positives = 168/348 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW + G
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 189
Query: 182 QIKLWRMND-----SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
I + D S A + + Y N +CV + + +A++ S
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCV------QTLEGHAQNVS---------- 233
Query: 237 CLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA 296
C + F E +I++ +ED ++R+W + +T ER W + + N A
Sbjct: 234 CAS-FHPELP-----IIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 297 AGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVV 343
G+D G ++ K RE PA ++ N + + K + + +L D+ +
Sbjct: 288 LGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEI 335
Score = 189 (71.6 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++ K+ C GH Y+ + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH V C ++ D ++S + D+ +++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 102 (41.0 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVNKLAEGAE 720
Score = 52 (23.4 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGQSIIAYLQQK 957
N++Y D+E + + + +++ A++ + ++VL + + + +L+++
Sbjct: 571 NRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQ 628
Query: 958 GYPEVALHFVKDDRTRLTLALECGNI 983
G+ + AL D R LAL+ G +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGEL 654
Score = 40 (19.1 bits), Expect = 9.6e-09, Sum P(3) = 9.6e-09
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 181 RQIKLWRMNDSK 192
R +KLWR N SK
Sbjct: 768 RVVKLWRENLSK 779
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 361 ATEHSILVTTRNANNFENSTYDL 383
A+ ++VT++ AN E S +L
Sbjct: 858 ASPTPVIVTSQTANKEEKSLLEL 880
Score = 37 (18.1 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 918 DPTEFKFKLAL----INHKYEEVLHIVRNSRLVGQSIIAYLQ-QKGYPEVALHFVKDDRT 972
DP E +F+LAL + Y+ + + + +A + Q G + LH +D
Sbjct: 640 DP-EHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 698
Query: 973 RLTLALECGN 982
L LA GN
Sbjct: 699 LLLLATASGN 708
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 382 (139.5 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 101/348 (29%), Positives = 168/348 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW + G
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 189
Query: 182 QIKLWRMND-----SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
I + D S A + + Y N +CV + + +A++ S
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCV------QTLEGHAQNVS---------- 233
Query: 237 CLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA 296
C + F E +I++ +ED ++R+W + +T ER W + + N A
Sbjct: 234 CAS-FHPELP-----IIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 297 AGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVV 343
G+D G ++ K RE PA ++ N + + K + + +L D+ +
Sbjct: 288 LGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEI 335
Score = 189 (71.6 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++ K+ C GH Y+ + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH V C ++ D ++S + D+ +++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 102 (41.0 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 689 CLHHAQDYGGLLLLATASGNANMVNKLAEGAE 720
Score = 52 (23.4 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGQSIIAYLQQK 957
N++Y D+E + + + +++ A++ + ++VL + + + +L+++
Sbjct: 571 NRLYLGDKELNIISYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQ 628
Query: 958 GYPEVALHFVKDDRTRLTLALECGNI 983
G+ + AL D R LAL+ G +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGEL 654
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 181 RQIKLWRMNDSK 192
R +KLWR N SK
Sbjct: 768 RVVKLWRENLSK 779
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 589 TGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATH 644
+GN + K+ + AE + + + L G+V +++L G+ A A T+
Sbjct: 706 SGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTY 761
Score = 37 (18.1 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 918 DPTEFKFKLAL----INHKYEEVLHIVRNSRLVGQSIIAYLQ-QKGYPEVALHFVKDDRT 972
DP E +F+LAL + Y+ + + + +A + Q G + LH +D
Sbjct: 640 DP-EHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 698
Query: 973 RLTLALECGN 982
L LA GN
Sbjct: 699 LLLLATASGN 708
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 382 (139.5 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 101/348 (29%), Positives = 168/348 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW + G
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 189
Query: 182 QIKLWRMND-----SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
I + D S A + + Y N +CV + + +A++ S
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCV------QTLEGHAQNVS---------- 233
Query: 237 CLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA 296
C + F E +I++ +ED ++R+W + +T ER W + + N A
Sbjct: 234 CAS-FHPELP-----IIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 297 AGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVV 343
G+D G ++ K RE PA ++ N + + K + + +L D+ +
Sbjct: 288 LGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEI 335
Score = 189 (71.6 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++ K+ C GH Y+ + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH V C ++ D ++S + D+ +++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 102 (41.0 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVNKLAEGAE 720
Score = 52 (23.4 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGQSIIAYLQQK 957
N++Y D+E + + + +++ A++ + ++VL + + + +L+++
Sbjct: 571 NRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQ 628
Query: 958 GYPEVALHFVKDDRTRLTLALECGNI 983
G+ + AL D R LAL+ G +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGEL 654
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 181 RQIKLWRMNDSK 192
R +KLWR N SK
Sbjct: 768 RVVKLWRENLSK 779
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 918 DPTEFKFKLAL----INHKYEEVLHIVRNSRLVGQSIIAYLQ-QKGYPEVALHFVKDDRT 972
DP E +F+LAL + Y+ + + + +A + Q G + LH +D
Sbjct: 640 DP-EHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 698
Query: 973 RLTLALECGN 982
L LA GN
Sbjct: 699 LLLLATASGN 708
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 382 (139.5 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 101/348 (29%), Positives = 168/348 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + + H DYIR H P+IL++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ +C V GH HYVM +P D+ SASLD+TI+VW + G
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 189
Query: 182 QIKLWRMND-----SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
I + D S A + + Y N +CV + + +A++ S
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCV------QTLEGHAQNVS---------- 233
Query: 237 CLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA 296
C + F E +I++ +ED ++R+W + +T ER W + + N A
Sbjct: 234 CAS-FHPELP-----IIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 297 AGHDAGMVVFKFERERPAYTVH-NNVMYYVKERFLHRLDLTNSKDSVV 343
G+D G ++ K RE PA ++ N + + K + + +L D+ +
Sbjct: 288 LGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEI 335
Score = 189 (71.6 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++ K+ C GH Y+ + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH V C ++ D ++S + D+ +++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 102 (41.0 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVNKLAEGAE 720
Score = 52 (23.4 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGQSIIAYLQQK 957
N++Y D+E + + + +++ A++ + ++VL + + + +L+++
Sbjct: 571 NRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQ 628
Query: 958 GYPEVALHFVKDDRTRLTLALECGNI 983
G+ + AL D R LAL+ G +
Sbjct: 629 GFKQQALTVSTDPEHRFELALQLGEL 654
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 181 RQIKLWRMNDSK 192
R +KLWR N SK
Sbjct: 768 RVVKLWRENLSK 779
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K AQ
Sbjct: 466 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 499
Score = 37 (18.1 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 918 DPTEFKFKLAL----INHKYEEVLHIVRNSRLVGQSIIAYLQ-QKGYPEVALHFVKDDRT 972
DP E +F+LAL + Y+ + + + +A + Q G + LH +D
Sbjct: 640 DP-EHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 698
Query: 973 RLTLALECGN 982
L LA GN
Sbjct: 699 LLLLATASGN 708
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 374 (136.7 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 87/319 (27%), Positives = 153/319 (47%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +S RVKG+ FHP PW+L++L++G ++LW+Y + E PVR F ++
Sbjct: 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN 68
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ G DD++I+V+NY + + H DYIR+ H P++LS SDD T+++WNW++
Sbjct: 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128
Query: 125 RNCI-CVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKN--VAPGMGADD 180
+ GH H+VMC F+P D S LD+T++VW + G N + G
Sbjct: 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL-GQSTPNFTLTTGQERGV 187
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ + + D K + + ++++ ++ +++ V+ E + L
Sbjct: 188 NYVDYYPLPD-KPYMITAS----DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL-- 240
Query: 241 FRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT--LNLFAAG 298
+I+S +ED ++++W+ + T ER W + HPT N A+G
Sbjct: 241 ----------PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG 290
Query: 299 HDAGMVVFKFERERPAYTV 317
D G V + P ++
Sbjct: 291 FDNGFTVLSLGNDEPTLSL 309
Score = 90 (36.7 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 451 GTGYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSV---WERLGHAALMQGNH 507
G Y E AL+ D + LAL+ G + +A + +L D+S W LG A+L + N
Sbjct: 641 GQEYYEEALNISPDQDQKFELALKVGQLTLARD---LLTDESAEMKWRALGDASLQRFNF 697
Query: 508 QIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
++ + + + L L+ N E L + K AE
Sbjct: 698 KLAVEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAE 734
Score = 66 (28.3 bits), Expect = 7.5e-33, Sum P(3) = 7.5e-33
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQS----IIAYLQQ 956
N+VY DRE + I +F+ + + EE + V + + G+ I +L+
Sbjct: 583 NKVYLADREVHVYGYEISLEVLEFQTLTLRGEIEEAIENVLPN-VEGKDSLTKIARFLEG 641
Query: 957 KGYPEVALHFVKDDRTRLTLALECGNI 983
+ Y E AL+ D + LAL+ G +
Sbjct: 642 QEYYEEALNISPDQDQKFELALKVGQL 668
Score = 49 (22.3 bits), Expect = 7.5e-33, Sum P(3) = 7.5e-33
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 837 KCRHVVWSPDMTHLALLSK 855
KC+ VW PD AL+ +
Sbjct: 394 KCQDFVWGPDSNSYALIDE 412
Score = 41 (19.5 bits), Expect = 5.1e-32, Sum P(3) = 5.1e-32
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 808 TGALLCREAD-HVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALL 853
+GALL ++D V FD + ++ V + V+WS D L ++
Sbjct: 441 SGALLGVKSDGFVYFFDWDNGTLVRRIDV-NAKDVIWS-DNGELVMI 485
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 369 (135.0 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 115/441 (26%), Positives = 200/441 (45%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP W+L++L+NG + +W+Y TL++ F+ + PVR F ++
Sbjct: 10 KLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRK 69
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+G DD I+V+NY + + H DY+R+ H P+++S+SDD +++W+W
Sbjct: 70 SWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWD 129
Query: 124 SRNCICV-LTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVW----DISGLRKKNVAPGMG 177
++ + GH HYVM +P D+ +ASLD+T++VW ++ + G+
Sbjct: 130 NKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVN 189
Query: 178 ADDRQI---KLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
D K + ++ + V I+ Y N +CV + + +A++ S
Sbjct: 190 CVDYYHGGEKPYIISGADDHLVKIW--DYQNKTCV------QTLDGHAQNVS-------- 233
Query: 235 RTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNL 294
C F E +I++ +ED ++RLW T ER W + A N
Sbjct: 234 SVC---FHPELP-----LIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANT 285
Query: 295 FAAGHDAGMVVFKFERERPAYTVHNN-VMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIP 353
A G+D G V K RE PA ++ ++ + + K + + +L ++ G R+P
Sbjct: 286 IAIGYDEGSVTLKLGREEPAVSMDSSGKILWAKHSEIQQANLKTISTEESEAIQDGERLP 345
Query: 354 AHSISYNATEHSILVTTRNANN-FENSTYDLYMIPKEESERKEVADGKRSTGISAVW-VA 411
++E ++N F + D I + G+ G+ VW V
Sbjct: 346 LSVKDLGSSEIYPQTLAHSSNGRFVVACGDGEYIVYTAMALRNKDFGQ---GLEFVWAVD 402
Query: 412 RNRFAVLDRNHTILIK-NLKN 431
N FAV + + IK N K+
Sbjct: 403 PNMFAVRESATNVKIKKNFKD 423
Score = 175 (66.7 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 36/167 (21%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F P++ W+++ + I++++Y + +F+ H +R + H
Sbjct: 49 LVKSFEVCDVPVRAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVH 108
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
P +S DD +K+W++ + + + GH Y+ + + +AS D+T++
Sbjct: 109 PTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVK 168
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W + S L GH V C ++ + ++S + D +++WD
Sbjct: 169 VWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWD 215
Score = 81 (33.6 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 20/87 (22%), Positives = 41/87 (47%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL +D + L++ G++ A + A + + W+ L +AA ++ +
Sbjct: 628 GFKKQALAVSQDPDHKFDLSVALGDLKTAYDLALQSDSEEKWKALSNAATLKSELLLAGE 687
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKM 539
C R ++F L L G+ L+K+
Sbjct: 688 CLGRARDFGGLMLLATCAGSAPLLQKL 714
Score = 46 (21.3 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 592 LEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATH 644
L+KL AE +IS + ++LLLG++ + L S G+ A A TH
Sbjct: 711 LQKLADDSAAAE-SHNIS--FLSSLLLGDIDACLDKLISTGRLPEAAFLARTH 760
Score = 38 (18.4 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 387 PKEESERKEVADGKRSTGISA 407
P+EE E++E D ++ + A
Sbjct: 902 PEEEEEQEEFDDDQQEVHVPA 922
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 327 (120.2 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 92/328 (28%), Positives = 157/328 (47%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
+L+SL+NG + +W++ TL++ F+ + PVR F ++ V+G DD +I+V+NY
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR-NCICVLTGHNHYVMCAQ 142
+ + H DYIR H P+IL++SDD I++W+W + +C V GH HYVM
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 143 FHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND-----SKAWEV 196
+P D+ SASLD+TI+VW + G I + D S A +
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDR 180
Query: 197 DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSN 256
+ Y N +CV + + +A++ S C + F E +I++
Sbjct: 181 LVKIWDYQNKTCV------QTLEGHAQNVS----------CAS-FHPELP-----IIITG 218
Query: 257 AEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYT 316
+ED ++R+W + +T ER W + + N A G+D G ++ K RE PA +
Sbjct: 219 SEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMS 278
Query: 317 VH-NNVMYYVKERFLHRLDLTNSKDSVV 343
+ N + + K + + +L D+ +
Sbjct: 279 MDANGKIIWAKHSEVQQANLKAMGDAEI 306
Score = 189 (71.6 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 20 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 79
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++ K+ C GH Y+ + + SAS D+TI+
Sbjct: 80 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 139
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH V C ++ D ++S + D+ +++WD
Sbjct: 140 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 186
Score = 110 (43.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 15/59 (25%), Positives = 36/59 (61%)
Query: 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWN 79
+P+++S + ++++WDY+ T ++ + H V FH + PI ++G +D +++W+
Sbjct: 170 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Score = 102 (41.0 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 600 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 659
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 660 CLHHAQDYGGLLLLATASGNASMVNKLAEGAE 691
Score = 52 (23.4 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGQSIIAYLQQK 957
N++Y D+E + + + +++ A++ + ++VL + + + +L+++
Sbjct: 542 NRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQ 599
Query: 958 GYPEVALHFVKDDRTRLTLALECGNI 983
G+ + AL D R LAL+ G +
Sbjct: 600 GFKQQALTVSTDPEHRFELALQLGEL 625
Score = 37 (18.1 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K AQ
Sbjct: 437 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 470
Score = 37 (18.1 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K AQ
Sbjct: 437 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 470
Score = 37 (18.1 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K AQ
Sbjct: 437 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 470
Score = 37 (18.1 bits), Expect = 5.0e-24, Sum P(3) = 5.0e-24
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 918 DPTEFKFKLAL----INHKYEEVLHIVRNSRLVGQSIIAYLQ-QKGYPEVALHFVKDDRT 972
DP E +F+LAL + Y+ + + + +A + Q G + LH +D
Sbjct: 611 DP-EHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 669
Query: 973 RLTLALECGN 982
L LA GN
Sbjct: 670 LLLLATASGN 679
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 327 (120.2 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 92/328 (28%), Positives = 157/328 (47%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
+L+SL+NG + +W++ TL++ F+ + PVR F ++ V+G DD +I+V+NY
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR-NCICVLTGHNHYVMCAQ 142
+ + H DYIR H P+IL++SDD I++W+W + +C V GH HYVM
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 143 FHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND-----SKAWEV 196
+P D+ SASLD+TI+VW + G I + D S A +
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDR 180
Query: 197 DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSN 256
+ Y N +CV + + +A++ S C + F E +I++
Sbjct: 181 LVKIWDYQNKTCV------QTLEGHAQNVS----------CAS-FHPELP-----IIITG 218
Query: 257 AEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYT 316
+ED ++R+W + +T ER W + + N A G+D G ++ K RE PA +
Sbjct: 219 SEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMS 278
Query: 317 VH-NNVMYYVKERFLHRLDLTNSKDSVV 343
+ N + + K + + +L D+ +
Sbjct: 279 MDANGKIIWAKHSEVQQANLKAMGDAEI 306
Score = 189 (71.6 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ W+++ + I++++Y + F+ H +R I H
Sbjct: 20 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 79
Query: 61 NQQPIFVSGGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 118
QP ++ DD IK+W++ K+ C GH Y+ + + SAS D+TI+
Sbjct: 80 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 139
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 163
+W S + L GH V C ++ D ++S + D+ +++WD
Sbjct: 140 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 186
Score = 110 (43.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 15/59 (25%), Positives = 36/59 (61%)
Query: 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWN 79
+P+++S + ++++WDY+ T ++ + H V FH + PI ++G +D +++W+
Sbjct: 170 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Score = 102 (41.0 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 453 GYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEM 512
G+ + AL D R LAL+ G + IA + A E + W++L A+ + + +
Sbjct: 600 GFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 659
Query: 513 CYQRTKNFDKLAFLYLITGNLEKLKKMMKIAE 544
C +++ L L +GN + K+ + AE
Sbjct: 660 CLHHAQDYGGLLLLATASGNANMVNKLAEGAE 691
Score = 52 (23.4 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 901 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGQSIIAYLQQK 957
N++Y D+E + + + +++ A++ + ++VL + + + +L+++
Sbjct: 542 NRLYLGDKELNIISYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQ 599
Query: 958 GYPEVALHFVKDDRTRLTLALECGNI 983
G+ + AL D R LAL+ G +
Sbjct: 600 GFKQQALTVSTDPEHRFELALQLGEL 625
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 181 RQIKLWRMNDSK 192
R +KLWR N SK
Sbjct: 739 RVVKLWRENLSK 750
Score = 37 (18.1 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 704 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 735
+ IF++ +G L+C E IL + +K AQ
Sbjct: 437 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 470
Score = 37 (18.1 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 755 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 786
+ IF++ +G L+C E IL + +K AQ
Sbjct: 437 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 470
Score = 37 (18.1 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 801 EEIFYAGTGALLC--READHVILFDVQQKRALAQ 832
+ IF++ +G L+C E IL + +K AQ
Sbjct: 437 KHIFWSDSGELVCIATEESFFILKYLSEKVLAAQ 470
Score = 37 (18.1 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 589 TGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATH 644
+GN + K+ + AE + + + L G+V +++L G+ A A T+
Sbjct: 677 SGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTY 732
Score = 37 (18.1 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 918 DPTEFKFKLAL----INHKYEEVLHIVRNSRLVGQSIIAYLQ-QKGYPEVALHFVKDDRT 972
DP E +F+LAL + Y+ + + + +A + Q G + LH +D
Sbjct: 611 DP-EHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 669
Query: 973 RLTLALECGN 982
L LA GN
Sbjct: 670 LLLLATASGN 679
>RGD|1310525 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10116 "Rattus norvegicus" [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] InterPro:IPR006692 InterPro:IPR010714
Pfam:PF04053 Pfam:PF06957 RGD:1310525 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 GO:GO:0005198 GO:GO:0030157 GO:GO:0030126
UniGene:Rn.203109 EMBL:BC091312 IPI:IPI00372458 STRING:Q5BJV4
PRIDE:Q5BJV4 HOVERGEN:HBG068904 InParanoid:Q5BJV4
ArrayExpress:Q5BJV4 Genevestigator:Q5BJV4 Uniprot:Q5BJV4
Length = 568
Score = 343 (125.8 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 64/80 (80%), Positives = 74/80 (92%)
Query: 477 NIDIALEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKL 536
NI+IALEAA+ L+DK+ WE+LG AL+QGNHQIVEMCYQRTKNFDKL+FLYLITGNLEKL
Sbjct: 1 NIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKL 60
Query: 537 KKMMKIAEIRRDISGQYQAA 556
+KMMKIAEIR+D+SG YQ A
Sbjct: 61 RKMMKIAEIRKDMSGHYQNA 80
Score = 340 (124.7 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 74/134 (55%), Positives = 89/134 (66%)
Query: 588 ITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGXX 647
ITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V ER++ILK+CGQ SLAYLTAATHG
Sbjct: 53 ITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLD 112
Query: 648 XXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPAPVAEAETNWPLLTVTKKMSSVGCEEI 706
T DP T+P + P A+LL+PPAP+ +TNWPLLTV+K G I
Sbjct: 113 EEAESLK---ETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFE-G--SI 166
Query: 707 FYAGTGALLCREAD 720
G G L + D
Sbjct: 167 ASKGKGGALAADID 180
Score = 47 (21.6 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 869 GLMKSDVINNIDSSLAATEVDV-----QGWGDDADL 899
G + + + A ++D+ +GWG+DA+L
Sbjct: 160 GFFEGSIASKGKGGALAADIDIDTVGTEGWGEDAEL 195
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 291 (107.5 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 75/281 (26%), Positives = 129/281 (45%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + + FHP ++S+ + I++WD+ H V+ + F Q + S
Sbjct: 109 ASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASC 168
Query: 70 GDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D IK+W+++Q +CI T+ GH + + F ++LSAS D+TI++W + C+
Sbjct: 169 SADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCV 228
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM 188
TGH +V + H I + S DQTIRVW ++ + V + W
Sbjct: 229 KTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAP 287
Query: 189 NDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF 248
++ A ++ G N H + + S + DK+IR+WD++ CL T
Sbjct: 288 -EAAASAINEAAGADNKKG----HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDN-- 340
Query: 249 W---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
W + +VS ++DK+IR+WD+ + C+ T Q
Sbjct: 341 WVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQ 381
Score = 259 (96.2 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 64/264 (24%), Positives = 126/264 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
V+ ++F + + S + I+LWD++ + ++ H+ V + F +S
Sbjct: 153 VQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSAS 212
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D IK+W C+ T GH +++R H E + S+DQTIR+W S++C
Sbjct: 213 RDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVE 272
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
L H H V C + P ++++++ + G + G+ D+ I++W ++
Sbjct: 273 LRDHEHTVECIAWAPE---AAASAINEAAGADNKKG-HHQGPFLASGSRDKTIRIWDVSV 328
Query: 191 SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS 250
+ GH N V + FHP + +VS ++DK+IR+WD+ + C+ T Q F +
Sbjct: 329 GLC--LLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQH-FCT 385
Query: 251 EV--------IVSNAEDKSIRLWD 266
+ ++S + D+++++W+
Sbjct: 386 SIDFHKAHPYVISGSVDQTVKVWE 409
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 78/316 (24%), Positives = 140/316 (44%)
Query: 45 EKFD--EHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
EKF H + + FH + VS +D I++W+++ + +L GH D ++ F
Sbjct: 100 EKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFD 159
Query: 103 HEYPWILSASDDQTIRIWNWQ-SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 161
+ + S S D +I++W++Q S CI + GH+H V F P D V+SAS D+TI++
Sbjct: 160 AQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKM 219
Query: 162 WDIS-GLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNN--VSCVLFHPKSEVI 218
W+++ G K G + +++ R++ E IF N+ + L + K +
Sbjct: 220 WEVATGYCVKTYT---GHRE-WVRMVRVHI----EGSIFATCSNDQTIRVWLTNSKDCKV 271
Query: 219 VSNAEDKSIRL--W-DMTKRTCLNTFR---REQERFWSEVIVSNAEDKSIRLWDMTKRTC 272
+ ++ W + +N ++ + S + DK+IR+WD++ C
Sbjct: 272 ELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLC 331
Query: 273 LNTFRREQERFWV--LVAHPTLN-LFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERF 329
L T WV L HP L +A D + V+ +R T++ + + F
Sbjct: 332 LLTLSGHDN--WVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDF 389
Query: 330 --LHRLDLTNSKDSVV 343
H ++ S D V
Sbjct: 390 HKAHPYVISGSVDQTV 405
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 220 (82.5 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 42/152 (27%), Positives = 77/152 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P W+ SS + +I++W + H+ + + + + + VS D
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 81
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW+ ++ C+ L
Sbjct: 82 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 141
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
H+ V F+ ++VS+S D R+WD
Sbjct: 142 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173
Score = 212 (79.7 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 49/157 (31%), Positives = 82/157 (52%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V + F+ I+SS ++G+ ++WD L+ D+ PV + F ++
Sbjct: 148 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 207
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IWN Q++
Sbjct: 208 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 267
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 268 VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 197 (74.4 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F S D IK+W K T+ GH I + + ++
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 77
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SASDD+T++IW+ S C+ L GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 78 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 132
Score = 196 (74.1 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 4 KFE-TKSARVKGLS---FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
KFE T S G+S + ++S+ + +++WD L+ H V F
Sbjct: 52 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 111
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ Q + VSG D +++W+ K KC+ TL H D + F+ + I+S+S D RI
Sbjct: 112 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 171
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ S C+ ++ N V +F P +++A+LD T+++WD S
Sbjct: 172 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 218
Score = 175 (66.7 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
+F+P+ I+S + +++WD + L+ H PV + F+ + VS D
Sbjct: 110 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 169
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
++W+ +C+ TL+ D +F F +IL+A+ D T+++W++ C+ TG
Sbjct: 170 RIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 228
Query: 134 HNH--YVMCAQFHPTDDI-VVSASLDQTIRVWDI 164
H + Y + A F T +VS S D + +W++
Sbjct: 229 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 262
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W ++ K + +GH N V C F+P+S +IVS + D+S+R+WD+ C
Sbjct: 80 SDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 137
Query: 238 LNTFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQER--FWVLVA 288
L T + F + +IVS++ D R+WD CL T + +V +
Sbjct: 138 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 197
Query: 289 HPTLNLFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERF 329
+ AA D + ++ + + + YT H N Y + F
Sbjct: 198 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 240
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 13 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 72
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMNDS-KAWEV 196
+++VSAS D+T+++WD+S + G I ++S + W+V
Sbjct: 73 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 132
Query: 197 DIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ H + VS V F+ +IVS++ D R+WD CL T
Sbjct: 133 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 182
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ IK+W D K +E I GH +S V + S ++VS ++DK++++WD++ CL
Sbjct: 40 DKLIKIWGAYDGK-FEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 97
Query: 240 TFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNT 275
T + + S +IVS + D+S+R+WD+ CL T
Sbjct: 98 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 140
Score = 129 (50.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + + V + F P +IL++ + ++LWDY L+ + H+ I F N
Sbjct: 182 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FANF 240
Query: 63 QPI----FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQT 116
VSG +D + +WN + ++ + L GH D + +T H I SA+ +D+T
Sbjct: 241 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 300
Query: 117 IRIW 120
I++W
Sbjct: 301 IKLW 304
Score = 119 (46.9 bits), Expect = 0.00063, P = 0.00063
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ----ERFWSE---VI 253
GH VS V F P E + S++ DK I++W T + + WS ++
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 76
Query: 254 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
VS ++DK++++WD++ CL T + + +P NL +G
Sbjct: 77 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 121
Score = 105 (42.0 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-REQERFW---------SEVIVS 255
VS V F P + I++ D +++LWD +K CL T+ + E++ + IVS
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
+ED + +W++ + + + + HPT N+ A+
Sbjct: 251 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 292
Score = 76 (31.8 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D + +W + + V +GH + V HP +I S A DK+I+LW
Sbjct: 251 GSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 273 (101.2 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 51 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 110
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 111 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 170
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 171 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 226
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 227 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 282
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 283 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 333
Score = 260 (96.6 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 88 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 147
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 148 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 207
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 208 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 259
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 260 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 316
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 317 FVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 224 (83.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 42 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 101
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 102 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 156
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 96
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 97 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 156
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 157 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 211
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 220 (82.5 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 42/152 (27%), Positives = 77/152 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P W+ SS + +I++W + H+ + + + + + VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
H+ V F+ ++VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 212 (79.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/157 (31%), Positives = 82/157 (52%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V + F+ I+SS ++G+ ++WD L+ D+ PV + F ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IWN Q++
Sbjct: 234 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 294 VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 197 (74.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F S D IK+W K T+ GH I + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SASDD+T++IW+ S C+ L GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 196 (74.1 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 4 KFE-TKSARVKGLS---FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
KFE T S G+S + ++S+ + +++WD L+ H V F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ Q + VSG D +++W+ K KC+ TL H D + F+ + I+S+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ S C+ ++ N V +F P +++A+LD T+++WD S
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Score = 175 (66.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
+F+P+ I+S + +++WD + L+ H PV + F+ + VS D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
++W+ +C+ TL+ D +F F +IL+A+ D T+++W++ C+ TG
Sbjct: 196 RIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 134 HNH--YVMCAQFHPTDDI-VVSASLDQTIRVWDI 164
H + Y + A F T +VS S D + +W++
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W ++ K + +GH N V C F+P+S +IVS + D+S+R+WD+ C
Sbjct: 106 SDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 238 LNTFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQER--FWVLVA 288
L T + F + +IVS++ D R+WD CL T + +V +
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 289 HPTLNLFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERF 329
+ AA D + ++ + + + YT H N Y + F
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMNDS-KAWEV 196
+++VSAS D+T+++WD+S + G I ++S + W+V
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 197 DIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ H + VS V F+ +IVS++ D R+WD CL T
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ IK+W D K +E I GH +S V + S ++VS ++DK++++WD++ CL
Sbjct: 66 DKLIKIWGAYDGK-FEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 240 TFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNT 275
T + + S +IVS + D+S+R+WD+ CL T
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Score = 129 (50.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + + V + F P +IL++ + ++LWDY L+ + H+ I F N
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FANF 266
Query: 63 QPI----FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQT 116
VSG +D + +WN + ++ + L GH D + +T H I SA+ +D+T
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 117 IRIW 120
I++W
Sbjct: 327 IKLW 330
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ----ERFWSE---VI 253
GH VS V F P E + S++ DK I++W T + + WS ++
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 254 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
VS ++DK++++WD++ CL T + + +P NL +G
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 105 (42.0 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-REQERFW---------SEVIVS 255
VS V F P + I++ D +++LWD +K CL T+ + E++ + IVS
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
+ED + +W++ + + + + HPT N+ A+
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 76 (31.8 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D + +W + + V +GH + V HP +I S A DK+I+LW
Sbjct: 277 GSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 220 (82.5 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 42/152 (27%), Positives = 77/152 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P W+ SS + +I++W + H+ + + + + + VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
H+ V F+ ++VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 212 (79.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/157 (31%), Positives = 82/157 (52%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V + F+ I+SS ++G+ ++WD L+ D+ PV + F ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IWN Q++
Sbjct: 234 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 294 VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 197 (74.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F S D IK+W K T+ GH I + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SASDD+T++IW+ S C+ L GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 196 (74.1 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 4 KFE-TKSARVKGLS---FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
KFE T S G+S + ++S+ + +++WD L+ H V F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ Q + VSG D +++W+ K KC+ TL H D + F+ + I+S+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ S C+ ++ N V +F P +++A+LD T+++WD S
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Score = 175 (66.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
+F+P+ I+S + +++WD + L+ H PV + F+ + VS D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
++W+ +C+ TL+ D +F F +IL+A+ D T+++W++ C+ TG
Sbjct: 196 RIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 134 HNH--YVMCAQFHPTDDI-VVSASLDQTIRVWDI 164
H + Y + A F T +VS S D + +W++
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W ++ K + +GH N V C F+P+S +IVS + D+S+R+WD+ C
Sbjct: 106 SDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 238 LNTFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQER--FWVLVA 288
L T + F + +IVS++ D R+WD CL T + +V +
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 289 HPTLNLFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERF 329
+ AA D + ++ + + + YT H N Y + F
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMNDS-KAWEV 196
+++VSAS D+T+++WD+S + G I ++S + W+V
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 197 DIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ H + VS V F+ +IVS++ D R+WD CL T
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ IK+W D K +E I GH +S V + S ++VS ++DK++++WD++ CL
Sbjct: 66 DKLIKIWGAYDGK-FEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 240 TFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNT 275
T + + S +IVS + D+S+R+WD+ CL T
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Score = 129 (50.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + + V + F P +IL++ + ++LWDY L+ + H+ I F N
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FANF 266
Query: 63 QPI----FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQT 116
VSG +D + +WN + ++ + L GH D + +T H I SA+ +D+T
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 117 IRIW 120
I++W
Sbjct: 327 IKLW 330
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ----ERFWSE---VI 253
GH VS V F P E + S++ DK I++W T + + WS ++
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 254 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
VS ++DK++++WD++ CL T + + +P NL +G
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 105 (42.0 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-REQERFW---------SEVIVS 255
VS V F P + I++ D +++LWD +K CL T+ + E++ + IVS
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
+ED + +W++ + + + + HPT N+ A+
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 76 (31.8 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D + +W + + V +GH + V HP +I S A DK+I+LW
Sbjct: 277 GSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 220 (82.5 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 42/152 (27%), Positives = 77/152 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P W+ SS + +I++W + H+ + + + + + VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
H+ V F+ ++VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 212 (79.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/157 (31%), Positives = 82/157 (52%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V + F+ I+SS ++G+ ++WD L+ D+ PV + F ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IWN Q++
Sbjct: 234 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 294 VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 197 (74.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F S D IK+W K T+ GH I + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SASDD+T++IW+ S C+ L GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 196 (74.1 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 4 KFE-TKSARVKGLS---FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
KFE T S G+S + ++S+ + +++WD L+ H V F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ Q + VSG D +++W+ K KC+ TL H D + F+ + I+S+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ S C+ ++ N V +F P +++A+LD T+++WD S
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Score = 175 (66.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
+F+P+ I+S + +++WD + L+ H PV + F+ + VS D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
++W+ +C+ TL+ D +F F +IL+A+ D T+++W++ C+ TG
Sbjct: 196 RIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 134 HNH--YVMCAQFHPTDDI-VVSASLDQTIRVWDI 164
H + Y + A F T +VS S D + +W++
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W ++ K + +GH N V C F+P+S +IVS + D+S+R+WD+ C
Sbjct: 106 SDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 238 LNTFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQER--FWVLVA 288
L T + F + +IVS++ D R+WD CL T + +V +
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 289 HPTLNLFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERF 329
+ AA D + ++ + + + YT H N Y + F
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMNDS-KAWEV 196
+++VSAS D+T+++WD+S + G I ++S + W+V
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 197 DIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ H + VS V F+ +IVS++ D R+WD CL T
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ IK+W D K +E I GH +S V + S ++VS ++DK++++WD++ CL
Sbjct: 66 DKLIKIWGAYDGK-FEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 240 TFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNT 275
T + + S +IVS + D+S+R+WD+ CL T
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Score = 129 (50.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + + V + F P +IL++ + ++LWDY L+ + H+ I F N
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FANF 266
Query: 63 QPI----FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQT 116
VSG +D + +WN + ++ + L GH D + +T H I SA+ +D+T
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 117 IRIW 120
I++W
Sbjct: 327 IKLW 330
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ----ERFWSE---VI 253
GH VS V F P E + S++ DK I++W T + + WS ++
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 254 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
VS ++DK++++WD++ CL T + + +P NL +G
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 105 (42.0 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-REQERFW---------SEVIVS 255
VS V F P + I++ D +++LWD +K CL T+ + E++ + IVS
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
+ED + +W++ + + + + HPT N+ A+
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 76 (31.8 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D + +W + + V +GH + V HP +I S A DK+I+LW
Sbjct: 277 GSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 220 (82.5 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 42/152 (27%), Positives = 77/152 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P W+ SS + +I++W + H+ + + + + + VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
H+ V F+ ++VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 212 (79.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/157 (31%), Positives = 82/157 (52%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V + F+ I+SS ++G+ ++WD L+ D+ PV + F ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IWN Q++
Sbjct: 234 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 294 VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 197 (74.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F S D IK+W K T+ GH I + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SASDD+T++IW+ S C+ L GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 196 (74.1 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 4 KFE-TKSARVKGLS---FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
KFE T S G+S + ++S+ + +++WD L+ H V F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ Q + VSG D +++W+ K KC+ TL H D + F+ + I+S+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ S C+ ++ N V +F P +++A+LD T+++WD S
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Score = 175 (66.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
+F+P+ I+S + +++WD + L+ H PV + F+ + VS D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
++W+ +C+ TL+ D +F F +IL+A+ D T+++W++ C+ TG
Sbjct: 196 RIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 134 HNH--YVMCAQFHPTDDI-VVSASLDQTIRVWDI 164
H + Y + A F T +VS S D + +W++
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W ++ K + +GH N V C F+P+S +IVS + D+S+R+WD+ C
Sbjct: 106 SDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 238 LNTFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQER--FWVLVA 288
L T + F + +IVS++ D R+WD CL T + +V +
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 289 HPTLNLFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERF 329
+ AA D + ++ + + + YT H N Y + F
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMNDS-KAWEV 196
+++VSAS D+T+++WD+S + G I ++S + W+V
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 197 DIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ H + VS V F+ +IVS++ D R+WD CL T
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ IK+W D K +E I GH +S V + S ++VS ++DK++++WD++ CL
Sbjct: 66 DKLIKIWGAYDGK-FEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 240 TFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNT 275
T + + S +IVS + D+S+R+WD+ CL T
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Score = 129 (50.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + + V + F P +IL++ + ++LWDY L+ + H+ I F N
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FANF 266
Query: 63 QPI----FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQT 116
VSG +D + +WN + ++ + L GH D + +T H I SA+ +D+T
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 117 IRIW 120
I++W
Sbjct: 327 IKLW 330
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ----ERFWSE---VI 253
GH VS V F P E + S++ DK I++W T + + WS ++
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 254 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
VS ++DK++++WD++ CL T + + +P NL +G
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 105 (42.0 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-REQERFW---------SEVIVS 255
VS V F P + I++ D +++LWD +K CL T+ + E++ + IVS
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
+ED + +W++ + + + + HPT N+ A+
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 76 (31.8 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D + +W + + V +GH + V HP +I S A DK+I+LW
Sbjct: 277 GSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 220 (82.5 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 42/152 (27%), Positives = 77/152 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P W+ SS + +I++W + H+ + + + + + VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
H+ V F+ ++VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 212 (79.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/157 (31%), Positives = 82/157 (52%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V + F+ I+SS ++G+ ++WD L+ D+ PV + F ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IWN Q++
Sbjct: 234 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 294 VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 197 (74.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F S D IK+W K T+ GH I + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SASDD+T++IW+ S C+ L GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 196 (74.1 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 4 KFE-TKSARVKGLS---FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
KFE T S G+S + ++S+ + +++WD L+ H V F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ Q + VSG D +++W+ K KC+ TL H D + F+ + I+S+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ S C+ ++ N V +F P +++A+LD T+++WD S
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Score = 175 (66.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
+F+P+ I+S + +++WD + L+ H PV + F+ + VS D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
++W+ +C+ TL+ D +F F +IL+A+ D T+++W++ C+ TG
Sbjct: 196 RIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 134 HNH--YVMCAQFHPTDDI-VVSASLDQTIRVWDI 164
H + Y + A F T +VS S D + +W++
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W ++ K + +GH N V C F+P+S +IVS + D+S+R+WD+ C
Sbjct: 106 SDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 238 LNTFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQER--FWVLVA 288
L T + F + +IVS++ D R+WD CL T + +V +
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 289 HPTLNLFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERF 329
+ AA D + ++ + + + YT H N Y + F
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMNDS-KAWEV 196
+++VSAS D+T+++WD+S + G I ++S + W+V
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 197 DIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ H + VS V F+ +IVS++ D R+WD CL T
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ IK+W D K +E I GH +S V + S ++VS ++DK++++WD++ CL
Sbjct: 66 DKLIKIWGAYDGK-FEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 240 TFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNT 275
T + + S +IVS + D+S+R+WD+ CL T
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Score = 129 (50.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + + V + F P +IL++ + ++LWDY L+ + H+ I F N
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FANF 266
Query: 63 QPI----FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQT 116
VSG +D + +WN + ++ + L GH D + +T H I SA+ +D+T
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 117 IRIW 120
I++W
Sbjct: 327 IKLW 330
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ----ERFWSE---VI 253
GH VS V F P E + S++ DK I++W T + + WS ++
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 254 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
VS ++DK++++WD++ CL T + + +P NL +G
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 105 (42.0 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-REQERFW---------SEVIVS 255
VS V F P + I++ D +++LWD +K CL T+ + E++ + IVS
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
+ED + +W++ + + + + HPT N+ A+
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 76 (31.8 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D + +W + + V +GH + V HP +I S A DK+I+LW
Sbjct: 277 GSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 220 (82.5 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 42/152 (27%), Positives = 77/152 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P W+ SS + +I++W + H+ + + + + + VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
H+ V F+ ++VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 203 (76.5 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 48/157 (30%), Positives = 81/157 (51%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V + F+ I+SS ++G+ ++WD L+ D+ PV + F ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W+Y + KC+ T H + Y I F WI+S S+D + IWN Q++
Sbjct: 234 LDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEV 293
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 294 VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 197 (74.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F S D IK+W K T+ GH I + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SASDD+T++IW+ S C+ L GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 196 (74.1 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 4 KFE-TKSARVKGLS---FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
KFE T S G+S + ++S+ + +++WD L+ H V F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ Q + VSG D +++W+ K KC+ TL H D + F+ + I+S+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ S C+ ++ N V +F P +++A+LD T+++WD S
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Score = 168 (64.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W ++ K + +GH N V C F+P+S +IVS + D+S+R+WD+ C
Sbjct: 106 SDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 238 LNTFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQER--FWVLVA 288
L T + F + +IVS++ D R+WD CL T + +V +
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 289 HPTLNLFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERF 329
+ AA D + ++ + + + YT H N Y + F
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANF 266
Score = 166 (63.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 39/154 (25%), Positives = 75/154 (48%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
+F+P+ I+S + +++WD + L+ H PV + F+ + VS D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
++W+ +C+ TL+ D +F F +IL+A+ D T+++W++ C+ T
Sbjct: 196 RIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTC 254
Query: 134 HNH--YVMCAQFHPTDDI-VVSASLDQTIRVWDI 164
H + Y + A F T +VS S D + +W++
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMNDS-KAWEV 196
+++VSAS D+T+++WD+S + G I ++S + W+V
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 197 DIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ H + VS V F+ +IVS++ D R+WD CL T
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ IK+W D K +E I GH +S V + S ++VS ++DK++++WD++ CL
Sbjct: 66 DKLIKIWGAYDGK-FEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 240 TFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNT 275
T + + S +IVS + D+S+R+WD+ CL T
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Score = 127 (49.8 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + + V + F P +IL++ + ++LWDY L+ + H+ I F N
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCI-FANF 266
Query: 63 QPI----FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQT 116
VSG +D + +WN + ++ + L GH D + +T H I SA+ +D+T
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 117 IRIW 120
I++W
Sbjct: 327 IKLW 330
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ----ERFWSE---VI 253
GH VS V F P E + S++ DK I++W T + + WS ++
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 254 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
VS ++DK++++WD++ CL T + + +P NL +G
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 105 (42.0 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-REQERFW---------SEVIVS 255
VS V F P + I++ D +++LWD +K CL T+ + E++ + IVS
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
+ED + +W++ + + + + HPT N+ A+
Sbjct: 277 GSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIAS 318
Score = 77 (32.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D + +W + + V +GH + V HP +I S A DK+I+LW
Sbjct: 277 GSEDNLVYIWNLQTKEV--VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 222 (83.2 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 41/149 (27%), Positives = 72/149 (48%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
+F P +L++ +G + +W + LL + H GPV+ CF + S D+ I
Sbjct: 33 AFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSI 92
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHN 135
++W+ + KC+ L GH + T F + + S D+ +W QS + +L GH
Sbjct: 93 RLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHC 152
Query: 136 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + F PT D + + S D T+ +WD+
Sbjct: 153 DSIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
VK F P I SS + I+LWD + L H+ V + F SGG
Sbjct: 71 VKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGW 130
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV- 130
D + VW + + + L+GH D I+++ F + + S D T+ IW+ ++ +
Sbjct: 131 DKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSY 190
Query: 131 --LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
L GH + C + + ++ S S D+TI VW
Sbjct: 191 HNLEGHTGNISCLCYSASG-LLASGSWDKTICVW 223
Score = 156 (60.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 34/129 (26%), Positives = 58/129 (44%)
Query: 47 FDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP 106
+ +H G V F ++ DD + VW K + ++ L GH +++ F +
Sbjct: 22 YGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGR 81
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
I S+S D +IR+W+ C+ VL GH V F P + S D+ VW++
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 167 LRKKNVAPG 175
R+ ++ G
Sbjct: 142 GRRVHLLVG 150
Score = 77 (32.2 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 25/111 (22%), Positives = 48/111 (43%)
Query: 177 GADDRQIKLWRMNDSK-AWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
G+ D + +W + S GH N+SC L + S ++ S + DK+I +W T
Sbjct: 170 GSWDSTVHIWDLRASTPVVSYHNLEGHTGNISC-LCYSASGLLASGSWDKTICVWKPTTN 228
Query: 236 TCLNTFRREQERFW--------SEVIVSNAE-DKSIRLWDMTKRTCLNTFR 277
+ + W E+ +++A +++++WD CL T +
Sbjct: 229 NL--PLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLK 277
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 189 (71.6 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 43/166 (25%), Positives = 73/166 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGG 70
+ + P ++S+ +++ WD++ + H PV + F + +GG
Sbjct: 66 ITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGG 125
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRIWNWQSRNCI 128
D IK+W+ ++ C L G + FH + + S+S D IRIW+ +S C+
Sbjct: 126 CDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCV 185
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 174
CVL H V F P +VS+ D+ VWD+ + K P
Sbjct: 186 CVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIP 231
Score = 156 (60.0 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ DR KLW ++D + + + RGH V V F P +++ S + D S+R+W + +
Sbjct: 502 GSQDRTAKLWALSDLRL--LGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFS 559
Query: 237 CLNTFRREQER-----FWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
CL TF F S +VS+ D ++LW + C+ T Q++ W L
Sbjct: 560 CLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWAL 616
Score = 135 (52.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 37/158 (23%), Positives = 62/158 (39%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + P + S + +LW LL H V + F I S
Sbjct: 487 VNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASA 546
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +++W+ + C+ T GH + F ++S+ D +++W ++ C+ L
Sbjct: 547 DGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTL 606
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
H V D+++V+ S D TI VW LRK
Sbjct: 607 DAHQDKVWALHGGCRDELMVTGSADSTITVWT-DKLRK 643
Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
Identities = 43/179 (24%), Positives = 75/179 (41%)
Query: 20 KRPWILSSLHNGVIQLWDYRMNTLLE-------KFDE--HEGPVRGICFHNQQPIFVSGG 70
K+ +++S + +++WD T E + E HE V +C + SG
Sbjct: 444 KQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGS 503
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D K+W + + GH + + F + SAS D ++RIW+ Q +C+
Sbjct: 504 QDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKT 563
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMN 189
GH+ V+ F +VS+ D +++W I K N D Q K+W ++
Sbjct: 564 FEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTI----KTNECVRT-LDAHQDKVWALH 617
Score = 126 (49.4 bits), Expect = 0.00056, P = 0.00056
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P + S+ +G +++W + + L+ F+ H+ V I F ++ VS G
Sbjct: 529 VWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGS 588
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +K+W K +C+ TL H D + +++ S D TI +W + R + +
Sbjct: 589 DGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVII 647
Score = 125 (49.1 bits), Expect = 0.00071, P = 0.00071
Identities = 52/246 (21%), Positives = 102/246 (41%)
Query: 50 HEGPVRGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 108
H V I C +Q VSG D +KVW+ + ++ + R+T HE
Sbjct: 431 HSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVM--MMKARSTERAHE---- 484
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGL 167
D ++ + S N + +G A+ D+ ++ VW +
Sbjct: 485 ---KDVNSVCV----SPNDKLLASGSQDRT--AKLWALSDLRLLGVCRGHRRGVWSVQFS 535
Query: 168 RKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSI 227
+ G + D +++W + D + F GH +V ++F + +VS+ D +
Sbjct: 536 PVDQIL-GSASADGSVRIWSIQDFSCLKT--FEGHDASVLKIIFVSRGTQLVSSGSDGLV 592
Query: 228 RLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLW-DMTKRTCL--NTFR 277
+LW + C+ T Q++ W+ E++V+ + D +I +W D ++T + +T +
Sbjct: 593 KLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVIIKSTKK 652
Query: 278 REQERF 283
+Q F
Sbjct: 653 VDQSLF 658
Score = 100 (40.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 32/142 (22%), Positives = 64/142 (45%)
Query: 32 VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLG 91
++Q+ ++ +E+ D+ + + + VS ++ W++KQ++C +
Sbjct: 46 ILQISTGKIIHSIEQEDQED--ITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRA 103
Query: 92 -HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDI- 149
H + + F + + D TI++W+ + C L G + V +FHP DI
Sbjct: 104 VHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHP--DIS 161
Query: 150 ---VVSASLDQTIRVWDISGLR 168
+ S+S D IR+WD+ R
Sbjct: 162 RLQLFSSSSDCAIRIWDLRSSR 183
Score = 98 (39.6 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 38/176 (21%), Positives = 70/176 (39%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH---NQQPI 65
S V +SF + + +G I+LWD G V + FH ++ +
Sbjct: 106 SVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQL 165
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
F S D I++W+ + +C+ L H + F + ++S+ D+ +W+ Q +
Sbjct: 166 F-SSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQ 224
Query: 126 NC------------ICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLR 168
+ +L+G Y +D + +V+A +RVWD S R
Sbjct: 225 KVKRTIPVYEAVEGVVLLSGSADYSEMGV--KSDALHLVTAGSKGVLRVWDSSSSR 278
Score = 94 (38.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 22/84 (26%), Positives = 40/84 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+ D I++W + S+ V + HY+ V+ + F P +VS+ DK +WD+ ++
Sbjct: 169 SSDCAIRIWDLRSSRC--VCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKV 226
Query: 238 LNTFRREQERFWSEVIVSNAEDKS 261
T E V++S + D S
Sbjct: 227 KRTIP-VYEAVEGVVLLSGSADYS 249
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 225 (84.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 51/157 (32%), Positives = 83/157 (52%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V + F+ I+SS ++G+ ++WD L+ D+ PV + F ++
Sbjct: 201 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 260
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IWN QS+
Sbjct: 261 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEV 320
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+C HPT++I+ SA+L D+TI++W
Sbjct: 321 VQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 215 (80.7 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 43/152 (28%), Positives = 76/152 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P W+ SS + +I++W + H+ + + + + + VSG D
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 134
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW K + TL GH +Y+ F+ + I+S S D+++RIW+ ++ C+ L
Sbjct: 135 DKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 194
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
H+ V F+ ++VS+S D R+WD
Sbjct: 195 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Score = 186 (70.5 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 46/167 (27%), Positives = 81/167 (48%)
Query: 4 KFE-TKSARVKGLS---FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
KFE T S G+S + ++S + +++W+ L+ H V F
Sbjct: 105 KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNF 164
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ Q + VSG D +++W+ + KC+ TL H D + F+ + I+S+S D RI
Sbjct: 165 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ S C+ ++ N V +F P +++A+LD T+++WD S
Sbjct: 225 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 271
Score = 179 (68.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F S D IK+W K T+ GH I + + ++
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 130
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S SDD+T+++W + + L GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 131 SGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Score = 178 (67.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 41/154 (26%), Positives = 76/154 (49%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
+F+P+ I+S + +++WD R L+ H PV + F+ + VS D
Sbjct: 163 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 222
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
++W+ +C+ TL+ D +F F +IL+A+ D T+++W++ C+ TG
Sbjct: 223 RIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 281
Query: 134 HNH--YVMCAQFHPTDDI-VVSASLDQTIRVWDI 164
H + Y + A F T +VS S D + +W++
Sbjct: 282 HKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNL 315
Score = 174 (66.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 46/164 (28%), Positives = 80/164 (48%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD+ +K+W ++ K+ + +GH N V C F+P+S +IVS + D+S+R+WD+
Sbjct: 132 GSDDKTLKVWELSTGKSLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 189
Query: 237 CLNTFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQER--FWVLV 287
CL T + F + +IVS++ D R+WD CL T + +V
Sbjct: 190 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 249
Query: 288 AHPTLNLFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERF 329
+ + AA D + ++ + + + YT H N Y + F
Sbjct: 250 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 293
Score = 139 (54.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 43/170 (25%), Positives = 71/170 (41%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
FTL GH + F W+ S+S D+ I+IW ++GH + +
Sbjct: 66 FTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 125
Query: 147 DDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMNDS-KAWEV 196
++VS S D+T++VW++S + G I ++S + W+V
Sbjct: 126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Query: 197 DIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ H + VS V F+ +IVS++ D R+WD CL T
Sbjct: 186 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 235
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/103 (31%), Positives = 56/103 (54%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ IK+W D K +E I GH +S V + S ++VS ++DK++++W+++ L
Sbjct: 93 DKLIKIWGAYDGK-FEKTI-SGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLK 150
Query: 240 TFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNT 275
T + + S +IVS + D+S+R+WD+ CL T
Sbjct: 151 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT 193
Score = 129 (50.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + + V + F P +IL++ + ++LWDY L+ + H+ I F N
Sbjct: 235 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FANF 293
Query: 63 QPI----FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQT 116
VSG +D + +WN + ++ + L GH D + T H I SA+ +D+T
Sbjct: 294 SVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKT 353
Query: 117 IRIW 120
I++W
Sbjct: 354 IKLW 357
Score = 111 (44.1 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-REQERFW---------SEVIVS 255
VS V F P + I++ D +++LWD +K CL T+ + E++ + IVS
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
+ED + +W++ + + + + HPT N+ A+
Sbjct: 304 GSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIAS 345
Score = 93 (37.8 bits), Expect = 9.7e-20, Sum P(2) = 9.7e-20
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D + +W + + V +GH + V C HP +I S A DK+I+LW
Sbjct: 304 GSEDNMVYIWNLQSKEV--VQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 216 (81.1 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
SA + + F P W+ SS + +I +W + H + + + + VS
Sbjct: 39 SAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVS 98
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
DD +KVW+ + KC+ TL GH D++ F+ I+S S D++++IW ++ C+
Sbjct: 99 ASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCL 158
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
L+ H+ + F+ ++VS S D R+WD
Sbjct: 159 KTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Score = 210 (79.0 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 49/167 (29%), Positives = 84/167 (50%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFH 60
L S + ++F+ I+S ++G+ ++WD L DE PV + F
Sbjct: 158 LKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFS 217
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTI 117
++ D +K+W+Y + +C+ T GH + Y + +F W++S S+D +
Sbjct: 218 PNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMV 277
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
IWN Q++ + L GH V+ A HPT +I+ SA+L D+TI+VW
Sbjct: 278 YIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 190 (71.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H + + F S D I +W C TL GH I + + ++
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLV 97
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SASDD+T+++W+ +S C+ L GH+ +V C F+P +++VS S D+++++W++
Sbjct: 98 SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Score = 188 (71.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 44/143 (30%), Positives = 69/143 (48%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
++S+ + +++WD R L+ H V F+ + VSG D +K+W K
Sbjct: 96 LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTG 155
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH-NHYVMCAQ 142
KC+ TL H D I F+ I+S S D RIW+ S C+ L N V +
Sbjct: 156 KCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVK 215
Query: 143 FHPTDDIVVSASLDQTIRVWDIS 165
F P +++A+LD T+++WD S
Sbjct: 216 FSPNGKYILTATLDNTLKLWDYS 238
Score = 166 (63.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F+P I+S + +++W+ + L+ H P+ + F+ + VSG D +
Sbjct: 131 FNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCR 190
Query: 77 VWNYKQRKCIFTLLGHLDY-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHN 135
+W+ +C+ TL + + F +IL+A+ D T+++W++ C+ TGH
Sbjct: 191 IWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHK 250
Query: 136 H--YVMCAQFHPTD-DIVVSASLDQTIRVWDI 164
+ Y + A F T VVS S D + +W++
Sbjct: 251 NEKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 47/180 (26%), Positives = 82/180 (45%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W M K + +GH + V C F+P S +IVS + D+S+++W++ C
Sbjct: 100 SDDKTLKVWDMRSGKCLKT--LKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKC 157
Query: 238 LNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQER--FWVLVA 288
L T + + +IVS + D R+WD CL T E +V +
Sbjct: 158 LKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFS 217
Query: 289 HPTLNLFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERFL---HRLDLTNSKDSVV 343
+ A D + ++ + R R YT H N Y + F + ++ S+D++V
Sbjct: 218 PNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMV 277
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 53/182 (29%), Positives = 75/182 (41%)
Query: 79 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYV 138
NY R TL GH I + F W+ S++ D I IW NC L GH+ +
Sbjct: 28 NYALR---LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEI 84
Query: 139 MCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAP--------GMGADDRQIKLWRMN 189
+ +VSAS D+T++VWD+ SG K + I +
Sbjct: 85 SDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 190 DS-KAWEVDIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+S K WEV + H + +S V F+ +IVS + D R+WD CL T
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA 204
Query: 243 RE 244
E
Sbjct: 205 DE 206
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 30/117 (25%), Positives = 56/117 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI-----F 66
V + F P +IL++ + ++LWDY L+ + H+ C +
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKN--EKYCLFASFSVTGRKWV 268
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQTIRIWN 121
VSG +D + +WN + ++ + L GH D + + H I SA+ +D+TI++W+
Sbjct: 269 VSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWS 325
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
A D I +W D + ++ GH +S V + S +VS ++DK++++WDM C
Sbjct: 58 AADALIIIWGAYDGNCKKT-LY-GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKC 115
Query: 238 LNTFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNT 275
L T + + + S +IVS + D+S+++W++ CL T
Sbjct: 116 LKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKT 160
Score = 103 (41.3 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 25/102 (24%), Positives = 50/102 (49%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-REQERF-----WSEV----IVS 255
VS V F P + I++ D +++LWD ++ CL T+ + E++ +S +VS
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVS 270
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAA 297
+ED + +W++ + + + + HPT N+ A+
Sbjct: 271 GSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIAS 312
Score = 76 (31.8 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 144 HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHY 203
H + + AS T R W +SG ++D + +W + + V +GH
Sbjct: 249 HKNEKYCLFASFSVTGRKWVVSG-----------SEDNMVYIWNLQTKEI--VQRLQGHT 295
Query: 204 NNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
+ V HP +I S A DK+I++W
Sbjct: 296 DVVISAACHPTKNIIASAALENDKTIKVW 324
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 273 (101.2 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 273 (101.2 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 273 (101.2 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 273 (101.2 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 273 (101.2 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 273 (101.2 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 273 (101.2 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 273 (101.2 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 272 (100.8 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 76/291 (26%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 TISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 259 (96.2 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 71/268 (26%), Positives = 123/268 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPG----MGADDRQIKLW 186
H H V C + P TI + +G KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY-------STIS--EATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 187 RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 246
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 324 DISTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAH-E 380
Query: 247 RFWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 223 (83.6 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 169 (64.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 47/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F T
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHT 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 272 (100.8 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 76/291 (26%), Positives = 129/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 223 (83.6 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 43/115 (37%), Positives = 62/115 (53%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D + F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 270 (100.1 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 75/291 (25%), Positives = 130/291 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + + S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SA+ D+TI++W Q+ C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W S +
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSYS- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE--R---FW 249
+ G S P ++S + DK+I++WD++ CL T R F
Sbjct: 292 SISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 250 S--EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
S + I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAAR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W + C+ T GH +++R + + I S S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGADDRQIKLWR 187
H H V C + P +S+ + KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
++ + GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 325 VSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 381
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 221 (82.9 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 42/115 (36%), Positives = 63/115 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D TI++W++Q CI + GH+H V P D +VSA+ D+TI++W++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Query: 197 DI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S + D+++R+W + + C R +
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 200 (75.5 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 47/160 (29%), Positives = 66/160 (41%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F A V +F P +L+ G + LW LL H GPV+ F +
Sbjct: 18 FSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGR 77
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+F S D ++ W KC TL H + T F + W+LS D IW+ QS
Sbjct: 78 LFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQS 137
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ L GHN V + F V + S D+ +RVW +
Sbjct: 138 GALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKL 177
Score = 80 (33.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
G+ DR +++W++ D +A E + +GH NV+C+ F
Sbjct: 166 GSWDRAVRVWKLRDRQA-EAVVLQGHLGNVACLCF 199
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 257 (95.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 73/268 (27%), Positives = 123/268 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W C+ T GH +++R + + I S+S+DQT+R+W ++ C L
Sbjct: 213 DKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPG----MGADDRQIKLW 186
H H V C + P S TI + +G KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPE-------SAHPTIL--EATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 187 RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 246
++ + GH N V VL HP + IVS A+DK++R+WD + C T E
Sbjct: 324 DVSIGMCLMTLV--GHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAH-E 380
Query: 247 RFWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 42/116 (36%), Positives = 64/116 (55%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+++ TL GH D ++ F H +
Sbjct: 107 HRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
S S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W+++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Score = 205 (77.2 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 43/149 (28%), Positives = 75/149 (50%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP I+S+ + I++WD+ H V+ I F + + S D IK
Sbjct: 116 FHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+TI++W + C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
+V + + ++ S+S DQT+RVW ++
Sbjct: 236 WVRMVRPNQDGTLIASSSNDQTVRVWVVA 264
Score = 171 (65.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 48/175 (27%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + I+SAS+D TI++W+ ++ + L GH V F T
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHT 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 197 ------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + +I S++ D+++R+W + + C R +
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHE 276
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 144 HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWE-VDIFRGH 202
H T D + T V DIS + AD IKLW D + +E + GH
Sbjct: 137 HETGDFERTLK-GHTDSVQDISFDHTGKLLASCSAD-MTIKLW---DFQGFECIRTMHGH 191
Query: 203 YNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF--RREQERFW-----SEVIVS 255
+NVS V P + IVS + DK+I++W++ C+ TF RE R +I S
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERF----WVLV-AHPTLNLFAAGHD 300
++ D+++R+W + + C R + W AHPT+ L A G +
Sbjct: 252 SSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTI-LEATGSE 300
Score = 129 (50.5 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D IK+W +++ +E + +GH ++V + F +++ S + D +I+LWD C
Sbjct: 127 SEDATIKVWD-HETGDFERTL-KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFEC 184
Query: 238 LNTFRREQERFWSEVIVSNAE-------DKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
+ T S I+ N + DK+I++W++ C+ TF +E WV + P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHRE--WVRMVRP 242
Score = 96 (38.9 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 218 IVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMT 268
++S + DK+I++WD++ CL T W + IVS A+DK++R+WD
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDN--WVRGVLVHPGGKYIVSCADDKTLRIWDYK 368
Query: 269 KRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ C T + L H T G
Sbjct: 369 NKRCTKTLSAHEHFVTSLDFHKTAPYVVTG 398
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 265 (98.3 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 69/229 (30%), Positives = 101/229 (44%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
I+LWD++ ++ H+ V + F +S D IKVW CI TL+GH
Sbjct: 172 IKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGH 231
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
D++R + I S S+DQTI+ WN C+ H+H V C F + I +
Sbjct: 232 EDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIP 291
Query: 153 ASLDQTIRVWDISGLRKKNVAPG-----------MGADDRQIKLWRMNDSKAWEVDIFRG 201
SL T G K PG G+ D+ IK+W + + I G
Sbjct: 292 GSLLSTPE-----GKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYI--G 344
Query: 202 HYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS 250
H N V V FHP + ++S +DK+IR+WD+ + C+ T F S
Sbjct: 345 HDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFIS 393
Score = 212 (79.7 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 39/114 (34%), Positives = 67/114 (58%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H + + FH + VS +D IKVW+++ + TL GH + ++ F +
Sbjct: 105 HRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLA 164
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
S S D TI++W++Q+ +C+ L GH+H V C +F P+ D ++S+S D+TI+VW+
Sbjct: 165 SCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
Score = 199 (75.1 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 42/153 (27%), Positives = 70/153 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ + FHP ++S+ + I++WD+ H V+ I F + S
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSA 168
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+++ C+ TL GH + F ++S+S D+TI++W + CI L
Sbjct: 169 DLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTL 228
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
GH +V + S S DQTI+ W+I
Sbjct: 229 VGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI 261
Score = 172 (65.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 49/170 (28%), Positives = 80/170 (47%)
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDD 148
L GH + I + FH + ++SAS+D TI++W+++S L GH + V F T +
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 149 IVVSASLDQTIRVWD------ISGLR--KKNVA--PGMGADDRQIKLWRMNDSKAWE--- 195
++ S S D TI++WD + L NV+ + D+ I R K WE
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Query: 196 ---VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ GH + V + I S + D++I+ W++ K CL T+R
Sbjct: 222 GYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYR 271
Score = 166 (63.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 47/148 (31%), Positives = 75/148 (50%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGA--D---DRQI 183
+LTGH + + +FHP+ ++VSAS D TI+VWD SG ++ + A D D+
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 184 KLWRMNDS----KAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
L + K W+ V GH +NVSCV F P + ++S++ DK+I++W+
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 234 KRTCLNTFRREQERFWSEVIVSNAEDKS 261
C+ T ++ W I + ED S
Sbjct: 221 TGYCIKTLVGHED--WVRKITVS-EDGS 245
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 54/189 (28%), Positives = 88/189 (46%)
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVV----SASLDQTIR-----VWDISGLRKKNVAPG 175
RNCI + H + + I V S ++T++ V DI + N+
Sbjct: 106 RNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLAS 165
Query: 176 MGADDRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
AD IKLW D + ++ V GH +NVSCV F P + ++S++ DK+I++W+
Sbjct: 166 CSAD-LTIKLW---DFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Query: 235 RTCLNTFRREQERFW------SE---VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWV 285
C+ T ++ W SE I S + D++I+ W++ K CL T+R E
Sbjct: 222 GYCIKTLVGHED--WVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYR-EHSHVVE 278
Query: 286 LVAHPTLNL 294
+A T N+
Sbjct: 279 CLAFSTANI 287
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 28/102 (27%), Positives = 47/102 (46%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
++ + + I++W+ L + H+ VR + FH +S GDD I+VW+ Q
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 83 RKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+CI T+ H +I F P I + D I++W Q
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 94 (38.1 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 218 IVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFW--SEVIVSNAEDKSIRLWDMTKR 270
+ + + DK+I++W++ CL T+ RF + ++S +DK+IR+WD+ +
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQG 378
Query: 271 TCLNTFRREQERF 283
C+ T F
Sbjct: 379 RCIKTINEAHTHF 391
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 269 (99.8 bits), Expect = 8.6e-20, P = 8.6e-20
Identities = 69/259 (26%), Positives = 121/259 (46%)
Query: 2 LTKFETKSARVKGLSF-HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
L E A V +S+ H R + S+ + +++WD +L + H VR + F
Sbjct: 289 LQALEGHEAAVLSVSYSHDSR-LLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ + S D +K+W+ TL GH D++R+ F H+ + SASDD T++IW
Sbjct: 348 HDSRLLASASDS-TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 406
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD---------ISGLRK-- 169
+ + + L GH +V F ++ SAS D T+++WD + G R
Sbjct: 407 DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWV 466
Query: 170 KNVA-------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA 222
++V +DDR +++W + K GH + V+ V F S ++ S +
Sbjct: 467 RSVIFSHDSRLLASASDDRTVRIW--DTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASAS 524
Query: 223 EDKSIRLWDMTKRTCLNTF 241
D+++R+WD+ R+ +TF
Sbjct: 525 NDQTVRIWDIEARSLQHTF 543
Score = 165 (63.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 46/192 (23%), Positives = 90/192 (46%)
Query: 85 CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFH 144
C+ L GH + + + H+ + SASDD+T++IW+ ++ + L GH+ V F
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 145 PTDDIVVSASLDQTIRVWDISGLRKKNVAPG--------MGADDRQIKLWRMNDS--KAW 194
++ SAS D T+++WD ++ G + + D Q+ +DS K W
Sbjct: 348 HDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 406
Query: 195 EVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF 248
+ GH + V V+F S+++ S ++D ++++WD + +T E R
Sbjct: 407 DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL--EGHRD 464
Query: 249 WSEVIVSNAEDK 260
W ++ + + +
Sbjct: 465 WVRSVIFSHDSR 476
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 45/199 (22%), Positives = 85/199 (42%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
A D +K+W GH + V V+F S+++ S ++D ++++WD +
Sbjct: 356 ASDSTVKIWDTGTGSLQHT--LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 413
Query: 238 LNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWV--- 285
+T E R W S+++ S ++D ++++WD + +T E R WV
Sbjct: 414 QHTL--EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL--EGHRDWVRSV 469
Query: 286 LVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLH--RLDLTNSKDSVV 343
+ +H + L +A D + ++ E+ +T+ + F H RL + S D V
Sbjct: 470 IFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTV 529
Query: 344 MQLRGGGRIPAHSISYNAT 362
R H+ +AT
Sbjct: 530 RIWDIEARSLQHTFDLDAT 548
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 271 (100.5 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 75/261 (28%), Positives = 127/261 (48%)
Query: 33 IQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLL 90
I+++DY+ + ++ HEGPV IC+ N Q +F SG D+ IKVW+ K+ +CIFTL
Sbjct: 482 IRVYDYKSQNMECVQTLKGHEGPVESICY-NDQYLF-SGSSDHSIKVWDLKKLRCIFTLE 539
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYV--MCAQFHPTDD 148
GH + T + +Y + S S D+TI++W+ ++ C L H V +C +
Sbjct: 540 GHDKPVHTVLLNDKY--LFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI----SGQ 593
Query: 149 IVVSASLDQTIRVWDISGLRKKNVAPG----------------MGADDRQIKLWRMNDSK 192
+ S S D+TI+VWD+ R G G+ D+ I++W + K
Sbjct: 594 YLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNL---K 650
Query: 193 AWEVDI-FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF--- 248
+ E RGH V ++ K ++ + ++D +I++WD+ C T
Sbjct: 651 SLECSATLRGHDRWVEHMVICDK--LLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCL 708
Query: 249 --WSE--VIVSNAEDKSIRLW 265
W + ++S + D+SIR+W
Sbjct: 709 AVWEDKKCVISCSHDQSIRVW 729
Score = 226 (84.6 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 64/222 (28%), Positives = 108/222 (48%)
Query: 26 SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKC 85
SS H+ I++WD + + + H+ PV + N + +F SG D IKVW+ K +C
Sbjct: 519 SSDHS--IKVWDLKKLRCIFTLEGHDKPVHTVLL-NDKYLF-SGSSDKTIKVWDLKTLEC 574
Query: 86 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHP 145
+TL H ++T +Y + S S+D+TI++W+ ++ C L GH +V
Sbjct: 575 KYTLESHARAVKTLCISGQY--LFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILG 632
Query: 146 TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIK--------LWRMNDS---KAW 194
T+ + S S D+TIRVW++ L G DR ++ L+ +D K W
Sbjct: 633 TN--LYSGSYDKTIRVWNLKSLECSATLRG---HDRWVEHMVICDKLLFTASDDNTIKIW 687
Query: 195 EVDIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+++ R GH V C+ + ++S + D+SIR+W
Sbjct: 688 DLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 215 (80.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
++ S + I++WD + + H V+ +C Q +F SG +D IKVW+ K
Sbjct: 554 YLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQY-LF-SGSNDKTIKVWDLKT 611
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
+C +TL GH ++ T + S S D+TIR+WN +S C L GH+ +V
Sbjct: 612 FRCNYTLKGHTKWVTTICILGTN--LYSGSYDKTIRVWNLKSLECSATLRGHDRWV--EH 667
Query: 143 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLW 186
D ++ +AS D TI++WD+ LR G A + + +W
Sbjct: 668 MVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVW 711
Score = 211 (79.3 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 74/296 (25%), Positives = 136/296 (45%)
Query: 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIF 66
T R K S ++P IL ++N + + L+E + +C + +
Sbjct: 419 TNKERSKSKSIDLEKPEIL--INNKKKESINLETIKLIETIKGYH-VTSHLCICDN--LL 473
Query: 67 VSGGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+G D I+V++YK + +C+ TL GH + + ++ +Y + S S D +I++W+ +
Sbjct: 474 FTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQY--LFSGSSDHSIKVWDLKK 531
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG--------- 175
CI L GH+ V + D + S S D+TI+VWD+ L K
Sbjct: 532 LRCIFTLEGHDKPVHTVLLN--DKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLC 589
Query: 176 -------MGADDRQIKLWRMNDSKAWEVDI-FRGHYNNVS--CVLFHPKSEVIVSNAEDK 225
G++D+ IK+W D K + + +GH V+ C+L + S + DK
Sbjct: 590 ISGQYLFSGSNDKTIKVW---DLKTFRCNYTLKGHTKWVTTICIL----GTNLYSGSYDK 642
Query: 226 SIRLWDMTKRTCLNTFRREQERFWSEVIVSN------AEDKSIRLWDMTKRTCLNT 275
+IR+W++ C T R +R+ +++ + ++D +I++WD+ C NT
Sbjct: 643 TIRVWNLKSLECSATLRGH-DRWVEHMVICDKLLFTASDDNTIKIWDLETLRC-NT 696
Score = 186 (70.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 52/160 (32%), Positives = 76/160 (47%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWD---YRMNTLLEKFDEHEGPVRGICFHNQ 62
E+ + VK L + ++ S ++ I++WD +R N L+ H V IC
Sbjct: 579 ESHARAVKTLCISGQ--YLFSGSNDKTIKVWDLKTFRCNYTLKG---HTKWVTTICILGT 633
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
SG D I+VWN K +C TL GH ++ + + +ASDD TI+IW+
Sbjct: 634 N--LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKL--LFTASDDNTIKIWDL 689
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
++ C L GHN V C V+S S DQ+IRVW
Sbjct: 690 ETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 263 (97.6 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 71/267 (26%), Positives = 122/267 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ +SF + S + I+LWD++ + H+ V + VS
Sbjct: 153 VQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W C+ T GH +++R + + + S S+DQT+R+W ++ C L
Sbjct: 213 DKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAEL 272
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPG----MGADDRQIKLW 186
H H V C + P S TI + +G KK+ PG G+ D+ IK+W
Sbjct: 273 REHEHVVECISWAPE-------SAHPTIS--EATGSENKKSGKPGPFLLSGSRDKTIKMW 323
Query: 187 RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 246
++ + GH N V VLFHP +VS A+DK++R+WD + C+ T +
Sbjct: 324 DISTGMCLMTLV--GHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEH 381
Query: 247 -----RFW--SEVIVSNAEDKSIRLWD 266
F S +V+ + D+++++W+
Sbjct: 382 FVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 256 (95.2 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 68/270 (25%), Positives = 120/270 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP ++S+ + I++WDY H V+ I F + S D IK
Sbjct: 116 FHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIK 175
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+++ +CI T+ GH + + I+SAS D+T+++W + C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE 235
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAW 194
+V + + ++ S S DQT+RVW ++ K + + ++ W +
Sbjct: 236 WVRMVRPNQDGTLLASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESAHP- 291
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW----- 249
+ G N S P ++S + DK+I++WD++ CL T W
Sbjct: 292 TISEATGSENKKSG---KP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDN--WVRGVL 345
Query: 250 ----SEVIVSNAEDKSIRLWDMTKRTCLNT 275
+VS A+DK++R+WD + C+ T
Sbjct: 346 FHPGGRFVVSCADDKTLRIWDYKNKRCMKT 375
Score = 212 (79.7 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 41/116 (35%), Positives = 63/116 (54%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H PV + FH + VS +D IKVW+Y+ TL GH D ++ F +
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLA 166
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
S S D TI++W++Q CI + GH+H V P D +VSAS D+T+++W+++
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Score = 169 (64.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ L GH + FH + ++SAS+D TI++W++++ + L GH V F T
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQT 161
Query: 147 DDIVVSASLDQTIRVWDISGLR--------KKNVAPG--MGADDRQIKLWRMNDSKAWEV 196
++ S S D TI++WD G NV+ M D + R K WEV
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEV 221
Query: 197 ------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
F GH V V + ++ S + D+++R+W + + C R +
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHE 276
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 43/149 (28%), Positives = 70/149 (46%)
Query: 158 TIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPKSE 216
T V DIS + + AD IKLW D + +E + GH +NVS V P +
Sbjct: 150 TDSVQDISFDQTGKLLASCSAD-MTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 217 VIVSNAEDKSIRLWDMTKRTCLNTF--RREQERFW-----SEVIVSNAEDKSIRLWDMTK 269
IVS + DK++++W++ C+ TF RE R ++ S + D+++R+W +
Sbjct: 206 HIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVAT 265
Query: 270 RTCLNTFRREQERF----WVLV-AHPTLN 293
+ C R + W AHPT++
Sbjct: 266 KECKAELREHEHVVECISWAPESAHPTIS 294
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 178 ADDRQIKLWRMNDSKAWEVD-IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
++D IK+W D +A + + +GH ++V + F +++ S + D +I+LWD
Sbjct: 127 SEDATIKVW---DYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFE 183
Query: 237 CLNTFRREQERFWSEVIVSNAE-------DKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ T S I+ N + DK++++W++ C+ TF +E WV +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE--WVRMVR 241
Query: 290 P 290
P
Sbjct: 242 P 242
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 273 (101.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 80/279 (28%), Positives = 126/279 (45%)
Query: 22 PWILSSLHNGVIQL-W---DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKV 77
PW + + +I++ W R +L+ D+H + + F + VSG DD +KV
Sbjct: 964 PWKAAYMRQHIIEMNWRSRPVRKPKVLKGHDDHV--ITCLQFSGNR--IVSGSDDNTLKV 1019
Query: 78 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHY 137
W+ KC+ TL+GH + ++ I+S S D+T+++W+ S C+ L GH
Sbjct: 1020 WSAVNGKCLRTLVGHTGGVWSSQMSGNI--IISGSTDRTLKVWDMDSGACVHTLQGHTST 1077
Query: 138 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------------MGADDR 181
V C H + VVS S D T+RVWDI +V G GA D
Sbjct: 1078 VRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDY 1135
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
+K+W + + +GH N V + F +VS + D SIR+WD+ C +T
Sbjct: 1136 MVKIWHPERQEC--LHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRVWDVETGNCKHTL 1191
Query: 242 RREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNT 275
Q ++VS D ++++WD+T CL T
Sbjct: 1192 MGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQT 1230
Score = 168 (64.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/174 (28%), Positives = 84/174 (48%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I+S ++ ++++W L H V + F VSG D I+VW+ +
Sbjct: 1128 IVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRVWDVETG 1185
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHN-HY--VMC 140
C TL+GH T+ ++S + D T+++W+ + C+ L+G N H+ V C
Sbjct: 1186 NCKHTLMGHQSL--TSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTC 1243
Query: 141 AQFHPTDDIVVSASLDQTIRVWDI-SGLRKKN-VAPGMGADDRQIKLWRMNDSK 192
QF+ VV++S D T+++WD+ +G +N VA G + R ND+K
Sbjct: 1244 LQFNSR--FVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTK 1295
Score = 167 (63.8 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 56/211 (26%), Positives = 93/211 (44%)
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFH---- 144
L GH D++ T I+S SDD T+++W+ + C+ L GH V +Q
Sbjct: 990 LKGHDDHV-ITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNII 1048
Query: 145 ---PTDDIVVSASLDQTIRVWDISG----LRKKNVAPGM---GADDRQIKLWRMNDSKAW 194
TD + +D V + G +R ++ G+ D +++W +
Sbjct: 1049 ISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCL 1108
Query: 195 EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV-- 252
V + GH V CV + K +IVS A D +++W ++ CL+T + R +S
Sbjct: 1109 HVLV--GHLAAVRCVQYDGK--LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFD 1164
Query: 253 ---IVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+VS + D SIR+WD+ C +T Q
Sbjct: 1165 GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQ 1195
Score = 152 (58.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 130 VLTGHN-HYVMCAQFHP------TDDIVV---SASLDQTIR--VWDISGLRKKNVAPGM- 176
VL GH+ H + C QF +DD + SA + +R V G+ ++ +
Sbjct: 989 VLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNII 1048
Query: 177 --GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G+ DR +K+W M DS A V +GH + V C+ H +VS + D ++R+WD+ +
Sbjct: 1049 ISGSTDRTLKVWDM-DSGAC-VHTLQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQ 1104
Query: 235 RTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
+CL+ ++ ++IVS A D +++W ++ CL+T + R + L
Sbjct: 1105 GSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSL-QF 1163
Query: 290 PTLNLFAAGHDAGMVVFKFERERPAYTV 317
L++ + D + V+ E +T+
Sbjct: 1164 DGLHVVSGSLDTSIRVWDVETGNCKHTL 1191
Score = 141 (54.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 59/279 (21%), Positives = 108/279 (38%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
L F R I+S + +++W L H G V I +SG D
Sbjct: 1001 LQFSGNR--IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN--IIISGSTDRT 1056
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-----------WILSASDDQTIRIWNWQ 123
+KVW+ C+ TL GH +R H W + + + +
Sbjct: 1057 LKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLA 1116
Query: 124 SRNCI-----CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS--GLRKKNVAPGM 176
+ C+ +++G Y M +HP + T RV+ + GL +
Sbjct: 1117 AVRCVQYDGKLIVSGAYDY-MVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVS----- 1170
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D I++W + GH + S + + ++VS D ++++WD+T
Sbjct: 1171 GSLDTSIRVWDVETGNCKHT--LMGHQSLTSGMEL--RQNILVSGNADSTVKVWDITTGQ 1226
Query: 237 CLNTFRREQE--------RFWSEVIVSNAEDKSIRLWDM 267
CL T + +F S +V++++D +++LWD+
Sbjct: 1227 CLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDV 1265
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 258 (95.9 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 65/243 (26%), Positives = 114/243 (46%)
Query: 33 IQLWDYRMN-TLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLG 91
I+LWD+ L+ HE V + F +S D+ IK W+ C++T G
Sbjct: 172 IKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRG 231
Query: 92 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 151
H D++R ++ SAS DQT+ +W++ +++ VL H H V C ++ P D
Sbjct: 232 HNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAP-DTAYT 290
Query: 152 SASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLF 211
+ + Q G ++ G+ DR IK W +N + H N V + F
Sbjct: 291 NVTGQQP------EG-NSTHILFS-GSRDRSIKAWNINTGDV--LFTLLAHENWVRGLAF 340
Query: 212 HPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIR 263
HPK + ++S A+DK++R+W+++ + C+ E F S V +++ + D S +
Sbjct: 341 HPKGKYLISVADDKTLRVWELSAQRCMKAIEAH-EHFVSTVAFHQTSPFVITGSVDMSCK 399
Query: 264 LWD 266
+W+
Sbjct: 400 VWE 402
Score = 243 (90.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 76/287 (26%), Positives = 122/287 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP + S + I++WDY L H V I VS D IK
Sbjct: 114 FHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIK 173
Query: 77 VWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHN 135
+W++ Q C+ +L GH + + F ++LSAS D TI+ W+ + C+ GHN
Sbjct: 174 LWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHN 233
Query: 136 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWE 195
+V + + SASLDQT+ VW + K V D + + + W
Sbjct: 234 DWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLR-----DHEHAV----ECVEWA 284
Query: 196 VDIFRGHYNNVSCVLFHPKS-EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW----- 249
D Y NV+ S ++ S + D+SI+ W++ L T + W
Sbjct: 285 PDTA---YTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHEN--WVRGLA 339
Query: 250 ----SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVA-HPT 291
+ ++S A+DK++R+W+++ + C+ E F VA H T
Sbjct: 340 FHPKGKYLISVADDKTLRVWELSAQRCMKAIEAH-EHFVSTVAFHQT 385
Score = 236 (88.1 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 75/274 (27%), Positives = 123/274 (44%)
Query: 45 EKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 104
+K H P+ + FH I S +D IKVW+Y+ + TL GH D +
Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAA 159
Query: 105 YPWILSASDDQTIRIWNW-QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
++S S D +I++W++ Q+ +C+ L GH H V F PT D V+SAS D TI+ WD
Sbjct: 160 GKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWD 219
Query: 164 ISGLRKKNVAPGMGADDRQIKLWRM-NDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA 222
IS V G +D +++ R+ ND + V+ F KS +V
Sbjct: 220 IS--TGYCVYTFRGHND-WVRMIRISNDGTLFASASLD---QTVTVWSFATKSAKLVLRD 273
Query: 223 EDKSIRLWDMTKRTCL-NTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 281
+ ++ + T N ++ E + ++ S + D+SI+ W++ L T +
Sbjct: 274 HEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHEN 333
Query: 282 RFWV--LVAHPTLN-LFAAGHDAGMVVFKFERER 312
WV L HP L + D + V++ +R
Sbjct: 334 --WVRGLAFHPKGKYLISVADDKTLRVWELSAQR 365
Score = 160 (61.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 43/172 (25%), Positives = 78/172 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V ++F P ++LS+ + I+ WD + F H VR I N +F S
Sbjct: 194 VSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASL 253
Query: 72 DYKIKVWNYKQRKCIFTLLGH------LDYIRTTFFHH---EYPW------ILSASDDQT 116
D + VW++ + L H +++ T + + + P + S S D++
Sbjct: 254 DQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRS 313
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
I+ WN + + + L H ++V FHP ++S + D+T+RVW++S R
Sbjct: 314 IKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQR 365
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/97 (25%), Positives = 48/97 (49%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
+ S + I+ W+ +L HE VRG+ FH + +S DD ++VW +
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQ 364
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+C+ + H ++ T FH P++++ S D + ++W
Sbjct: 365 RCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVW 401
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+GL+FHPK +++S + +++W+ ++ + HE V + FH P ++G
Sbjct: 335 VRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSV 394
Query: 72 DYKIKVW 78
D KVW
Sbjct: 395 DMSCKVW 401
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 241 (89.9 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 68/265 (25%), Positives = 116/265 (43%)
Query: 44 LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 103
+++F HE + + F + VS DD +K+W+ + I TL+GH +Y F+
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 104 EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
+ I+S S D+T+RIW+ + C+ VL H+ V F+ ++VS+S D R+WD
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Query: 164 ISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAE 223
G G + + ++D VS V F P + I+
Sbjct: 184 ----------SGTGHCVKTL----IDDENP-----------PVSFVRFSPNGKFILVGTL 218
Query: 224 DKSIRLWDMTKRTCLNTFRREQERFW----------SEVIVSNAEDKSIRLWDMTKRTCL 273
D ++RLW+++ L T+ + + IVS +ED + +W++ + L
Sbjct: 219 DNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLL 278
Query: 274 NTFRREQERFWVLVAHPTLNLFAAG 298
E + HPT NL A+G
Sbjct: 279 QKLEGHTETVMNVACHPTENLIASG 303
Score = 190 (71.9 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 60/261 (22%), Positives = 116/261 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ ++F +I+S+ + ++LWD +L++ H + F+ Q + VSG
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI-CV 130
D +++W+ KC+ L H D + F+ + I+S+S D RIW+ + +C+ +
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGADDRQIKLWRMN 189
+ N V +F P ++ +LD T+R+W+IS + G + A + +
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVT 253
Query: 190 DSKAWEVDIFRGHYNNVSCV-LFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF 248
+ K I G +N CV ++ S+ ++ E + T +N E
Sbjct: 254 NGKR----IVSGSEDN--CVHMWELNSKKLLQKLEGHT--------ETVMNVACHPTEN- 298
Query: 249 WSEVIVSNAEDKSIRLWDMTK 269
+I S + DK++R+W K
Sbjct: 299 ---LIASGSLDKTVRIWTQKK 316
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDD-----YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 104
H V + F + + S D Y I N + + GH + I F +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 105 YPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+I+SASDD+T+++W+ ++ + I L GH +Y C F+P +++VS S D+T+R+WD+
Sbjct: 83 ARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDV 142
Query: 165 SGLRKKNVAP 174
+ + V P
Sbjct: 143 TTGKCLKVLP 152
Score = 149 (57.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 67/268 (25%), Positives = 108/268 (40%)
Query: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC-----ICVLTGHNHYVMCAQ 142
TL H + + F + + SAS D+TIR + + N + TGH + +
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 143 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGH 202
F +VSAS D+T+++WD+ G+ IK GH
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVE----------TGS---LIKT-------------LIGH 112
Query: 203 YNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVS 255
N CV F+P+S +IVS + D+++R+WD+T CL + + +IVS
Sbjct: 113 TNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVS 172
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH-PTLNLFAAGH-DAGMVVFKFERER- 312
++ D R+WD C+ T ++ V P G D + ++ +
Sbjct: 173 SSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 313 -PAYTVHNNVMYYVKERFLHRLDLTNSK 339
YT H N Y + F +TN K
Sbjct: 233 LKTYTGHVNAQYCISSAF----SVTNGK 256
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 270 (100.1 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 74/300 (24%), Positives = 139/300 (46%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F PK + S + ++ +W+++ KF H+G V + + S G D +I+
Sbjct: 55 FDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIR 114
Query: 77 VW-NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHN 135
+W N Q KC + H IR+ F + ++LS+SDD+T+++W Q + +C GH
Sbjct: 115 LWQNTVQSKCSI-IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHK 173
Query: 136 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWE 195
++V P +V S S D+T+ +WD++ +K V+ DD +K+ ++N
Sbjct: 174 NWVRSGVISPDMRLVASGSDDKTVMLWDLNF--QKIVSKYSTLDDN-VKISQINS----- 225
Query: 196 VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVI-- 253
+ H + VS VLFHP ++S++ D I++ D+ + + + S I
Sbjct: 226 ---YSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHP 282
Query: 254 -----VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGM-VVFK 307
S D I++WD+ + + T + + + + + FA G + +V+K
Sbjct: 283 TGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVWK 342
Score = 164 (62.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 48/229 (20%), Positives = 96/229 (41%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
KF V + + P I S + I+LW + + H G +R + F
Sbjct: 84 KFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADG 143
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+S DD +K+W + +K + + GH +++R+ + + S SDD+T+ +W+
Sbjct: 144 GYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLN 203
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQI 183
+ + + + V +Q + D + + S Q + D + L + D +I
Sbjct: 204 FQKIVSKYSTLDDNVKISQINSYSDHMDTVS--QVLFHPDGTCLISSSF-------DHKI 254
Query: 184 KLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
K+ + +K + + H V+ + HP + S D I++WD+
Sbjct: 255 KITDIRSNKL--IQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDL 301
Score = 142 (55.0 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + FHP ++SS + I++ D R N L++ ++ H+ V I H S G
Sbjct: 233 VSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGS 292
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
D KIK+W+ +Q + I+TL + I T F+ + + +W
Sbjct: 293 DSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 137 (53.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 60/288 (20%), Positives = 121/288 (42%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
L F HE + F + S D + VWN+K ++ F +GH + +
Sbjct: 39 LSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYS 98
Query: 103 HEYPWILSASDDQTIRIW-NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 161
+ I S D+ IR+W N C ++ H + F ++S+S D+T+++
Sbjct: 99 PDGETIASCGQDRQIRLWQNTVQSKC-SIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKL 157
Query: 162 WDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
W + KK + G K W + + ++ + ++ + +L+ + IVS
Sbjct: 158 WRLQD--KKFMCSFAGH-----KNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVS- 209
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWSEVI--------VSNAEDKSIRLWDMTKRTCL 273
K L D K + +N++ + S+V+ +S++ D I++ D+ +
Sbjct: 210 ---KYSTLDDNVKISQINSYSDHMDTV-SQVLFHPDGTCLISSSFDHKIKITDIRSNKLI 265
Query: 274 NTFRREQERFWVLVAHPT-LNLFAAGHDAGMVVFKFERERPAYTVHNN 320
+ + + HPT L +AG D+ + ++ + R YT+++N
Sbjct: 266 QHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSN 313
Score = 39 (18.8 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 12/58 (20%), Positives = 21/58 (36%)
Query: 335 LTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESE 392
+ + DS+V P+ +A + + N +TY +PK E E
Sbjct: 472 IKSQNDSIVSNKNAIPFHPSSEFQQSAVQQQFSQQPKLVVNNGTATYPSNFVPKVEEE 529
Score = 37 (18.1 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 14/72 (19%), Positives = 27/72 (37%)
Query: 449 WPGTGYPEVALHFVKDDRTRLTLALECGNIDIALEAARVLEDKSVWERLGHAALMQGNHQ 508
+P P+V + + ++ +D + LE++ V + + NHQ
Sbjct: 518 YPSNFVPKVEEENIMTEAIAASMQQIYSRLDTMFQYMTNLENRVVQSEQLQKSFVSQNHQ 577
Query: 509 IVEMCYQRTKNF 520
Q+T NF
Sbjct: 578 NTLDPKQQTMNF 589
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 265 (98.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 80/281 (28%), Positives = 124/281 (44%)
Query: 22 PWILSSLHNGVIQL-W---DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKV 77
PW + + I W + R +L+ D+H C + VSG DD +KV
Sbjct: 272 PWKSAYIRQHRIDTNWRRGELRSPKVLKGHDDHVITCLQFCGNR----IVSGSDDNTLKV 327
Query: 78 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHY 137
W+ KC+ TL+GH + ++ I+S S D+T+++WN ++ CI L GH
Sbjct: 328 WSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTST 385
Query: 138 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------------MGADDR 181
V C H + VVS S D T+RVWDI + +V G GA D
Sbjct: 386 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDF 443
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
+K+W + +GH N V + F +VS + D SIR+WD+ C++T
Sbjct: 444 MVKVWDPETETC--LHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTL 499
Query: 242 RREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
Q ++VS D ++++WD+ CL T +
Sbjct: 500 TGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 540
Score = 168 (64.2 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 60/225 (26%), Positives = 99/225 (44%)
Query: 78 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
W + + L GH D++ T F I+S SDD T+++W+ + C+ L GH
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 137 YVMCAQFHP-------TDDI--VVSASLDQTIRVW--DISGLR-----KKNVAPGMGADD 180
V +Q TD V +A + I S +R +K V G + D
Sbjct: 345 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG--SRD 402
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+++W + + + + GH V CV + + +VS A D +++WD TCL+T
Sbjct: 403 ATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHT 458
Query: 241 FRREQERFWSEV-----IVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+ R +S +VS + D SIR+WD+ C++T Q
Sbjct: 459 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/268 (20%), Positives = 109/268 (40%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I+S + +++W L H G V + I +SG D +KVWN +
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG 373
Query: 84 KCIFTLLGHLDYIRTTFFHHEYP-----------WILSASDDQTIRIWNWQSRNCIC--- 129
+CI TL GH +R H + W + + + + + C+
Sbjct: 374 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 433
Query: 130 --VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWR 187
V++G + M + P + + T RV+ L+ + G+ D I++W
Sbjct: 434 RRVVSGAYDF-MVKVWDPETETCLHTLQGHTNRVYS---LQFDGIHVVSGSLDTSIRVWD 489
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR---RE 244
+ + GH + S + K ++VS D ++++WD+ CL T + +
Sbjct: 490 VETGNC--IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 245 QE-----RFWSEVIVSNAEDKSIRLWDM 267
Q +F ++++++D +++LWD+
Sbjct: 546 QSAVTCLQFNKNFVITSSDDGTVKLWDL 573
Score = 144 (55.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 130 VLTGHN-HYVMCAQF------HPTDDIVV---SASLDQTIR--VWDISGLRKKNVAPGM- 176
VL GH+ H + C QF +DD + SA + +R V G+ + +
Sbjct: 297 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII 356
Query: 177 --GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G+ DR +K+W + + GH + V C+ H K +VS + D ++R+WD+
Sbjct: 357 ISGSTDRTLKVWNAETGEC--IHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIET 412
Query: 235 RTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
CL+ ++ +VS A D +++WD TCL+T + R + L
Sbjct: 413 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Score = 40 (19.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 493 VWE-RLGHAA-LMQG--NHQIVEMCYQRTKNF 520
+W+ + G +QG HQ C Q KNF
Sbjct: 527 IWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF 558
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 263 (97.6 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 71/232 (30%), Positives = 108/232 (46%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
VSG DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++WN ++
Sbjct: 275 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 332
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------- 175
CI L GH V C H + VVS S D T+RVWDI + +V G
Sbjct: 333 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 390
Query: 176 -----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
GA D +K+W + +GH N V + F +VS + D SIR+W
Sbjct: 391 GRRVVSGAYDFMVKVWDPETETC--LHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVW 446
Query: 231 DMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
D+ C++T Q ++VS D ++++WD+ CL T +
Sbjct: 447 DVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 498
Score = 244 (91.0 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 68/268 (25%), Positives = 122/268 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I+S + +++W L H G V + I +SG D +KVWN +
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG 331
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+CI TL GH +R H + ++S S D T+R+W+ ++ C+ VL GH V C Q+
Sbjct: 332 ECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 389
Query: 144 HPTDDIVVSASLDQTIRVWD---------ISG-------LRKKNVAPGMGADDRQIKLWR 187
VVS + D ++VWD + G L+ + G+ D I++W
Sbjct: 390 DGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 447
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR---RE 244
+ + GH + S + K ++VS D ++++WD+ CL T + +
Sbjct: 448 VETGNC--IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 503
Query: 245 QE-----RFWSEVIVSNAEDKSIRLWDM 267
Q +F ++++++D +++LWD+
Sbjct: 504 QSAVTCLQFNKNFVITSSDDGTVKLWDL 531
Score = 171 (65.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 61/225 (27%), Positives = 99/225 (44%)
Query: 78 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
W + K L GH D++ T F I+S SDD T+++W+ + C+ L GH
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 302
Query: 137 YVMCAQFHP-------TDDI--VVSASLDQTIRVW--DISGLR-----KKNVAPGMGADD 180
V +Q TD V +A + I S +R +K V G + D
Sbjct: 303 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG--SRD 360
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+++W + + + + GH V CV + + +VS A D +++WD TCL+T
Sbjct: 361 ATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHT 416
Query: 241 FRREQERFWSEV-----IVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+ R +S +VS + D SIR+WD+ C++T Q
Sbjct: 417 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 461
Score = 144 (55.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 130 VLTGHN-HYVMCAQF------HPTDDIVV---SASLDQTIR--VWDISGLRKKNVAPGM- 176
VL GH+ H + C QF +DD + SA + +R V G+ + +
Sbjct: 255 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII 314
Query: 177 --GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G+ DR +K+W + + GH + V C+ H K +VS + D ++R+WD+
Sbjct: 315 ISGSTDRTLKVWNAETGEC--IHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIET 370
Query: 235 RTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
CL+ ++ +VS A D +++WD TCL+T + R + L
Sbjct: 371 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 427
Score = 40 (19.1 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 493 VWE-RLGHAA-LMQG--NHQIVEMCYQRTKNF 520
+W+ + G +QG HQ C Q KNF
Sbjct: 485 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 516
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 263 (97.6 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 71/232 (30%), Positives = 108/232 (46%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
VSG DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++WN ++
Sbjct: 315 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 372
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------- 175
CI L GH V C H + VVS S D T+RVWDI + +V G
Sbjct: 373 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 430
Query: 176 -----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
GA D +K+W + +GH N V + F +VS + D SIR+W
Sbjct: 431 GRRVVSGAYDFMVKVWDPETETC--LHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVW 486
Query: 231 DMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
D+ C++T Q ++VS D ++++WD+ CL T +
Sbjct: 487 DVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 538
Score = 244 (91.0 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 68/268 (25%), Positives = 122/268 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I+S + +++W L H G V + I +SG D +KVWN +
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG 371
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+CI TL GH +R H + ++S S D T+R+W+ ++ C+ VL GH V C Q+
Sbjct: 372 ECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 429
Query: 144 HPTDDIVVSASLDQTIRVWD---------ISG-------LRKKNVAPGMGADDRQIKLWR 187
VVS + D ++VWD + G L+ + G+ D I++W
Sbjct: 430 DGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 487
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR---RE 244
+ + GH + S + K ++VS D ++++WD+ CL T + +
Sbjct: 488 VETGNC--IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 543
Query: 245 QE-----RFWSEVIVSNAEDKSIRLWDM 267
Q +F ++++++D +++LWD+
Sbjct: 544 QSAVTCLQFNKNFVITSSDDGTVKLWDL 571
Score = 171 (65.3 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 61/225 (27%), Positives = 99/225 (44%)
Query: 78 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
W + K L GH D++ T F I+S SDD T+++W+ + C+ L GH
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 342
Query: 137 YVMCAQFHP-------TDDI--VVSASLDQTIRVW--DISGLR-----KKNVAPGMGADD 180
V +Q TD V +A + I S +R +K V G + D
Sbjct: 343 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG--SRD 400
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+++W + + + + GH V CV + + +VS A D +++WD TCL+T
Sbjct: 401 ATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHT 456
Query: 241 FRREQERFWSEV-----IVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+ R +S +VS + D SIR+WD+ C++T Q
Sbjct: 457 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 501
Score = 144 (55.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 130 VLTGHN-HYVMCAQF------HPTDDIVV---SASLDQTIR--VWDISGLRKKNVAPGM- 176
VL GH+ H + C QF +DD + SA + +R V G+ + +
Sbjct: 295 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII 354
Query: 177 --GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G+ DR +K+W + + GH + V C+ H K +VS + D ++R+WD+
Sbjct: 355 ISGSTDRTLKVWNAETGEC--IHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIET 410
Query: 235 RTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
CL+ ++ +VS A D +++WD TCL+T + R + L
Sbjct: 411 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 467
Score = 40 (19.1 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 493 VWE-RLGHAA-LMQG--NHQIVEMCYQRTKNF 520
+W+ + G +QG HQ C Q KNF
Sbjct: 525 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 556
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 263 (97.6 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 71/232 (30%), Positives = 108/232 (46%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
VSG DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++WN ++
Sbjct: 317 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 374
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------- 175
CI L GH V C H + VVS S D T+RVWDI + +V G
Sbjct: 375 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 432
Query: 176 -----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
GA D +K+W + +GH N V + F +VS + D SIR+W
Sbjct: 433 GRRVVSGAYDFMVKVWDPETETC--LHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVW 488
Query: 231 DMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
D+ C++T Q ++VS D ++++WD+ CL T +
Sbjct: 489 DVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 540
Score = 244 (91.0 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 68/268 (25%), Positives = 122/268 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I+S + +++W L H G V + I +SG D +KVWN +
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG 373
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+CI TL GH +R H + ++S S D T+R+W+ ++ C+ VL GH V C Q+
Sbjct: 374 ECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 431
Query: 144 HPTDDIVVSASLDQTIRVWD---------ISG-------LRKKNVAPGMGADDRQIKLWR 187
VVS + D ++VWD + G L+ + G+ D I++W
Sbjct: 432 DGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 489
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR---RE 244
+ + GH + S + K ++VS D ++++WD+ CL T + +
Sbjct: 490 VETGNC--IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 245 QE-----RFWSEVIVSNAEDKSIRLWDM 267
Q +F ++++++D +++LWD+
Sbjct: 546 QSAVTCLQFNKNFVITSSDDGTVKLWDL 573
Score = 171 (65.3 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 61/225 (27%), Positives = 99/225 (44%)
Query: 78 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
W + K L GH D++ T F I+S SDD T+++W+ + C+ L GH
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 137 YVMCAQFHP-------TDDI--VVSASLDQTIRVW--DISGLR-----KKNVAPGMGADD 180
V +Q TD V +A + I S +R +K V G + D
Sbjct: 345 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG--SRD 402
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+++W + + + + GH V CV + + +VS A D +++WD TCL+T
Sbjct: 403 ATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHT 458
Query: 241 FRREQERFWSEV-----IVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+ R +S +VS + D SIR+WD+ C++T Q
Sbjct: 459 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Score = 144 (55.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 130 VLTGHN-HYVMCAQF------HPTDDIVV---SASLDQTIR--VWDISGLRKKNVAPGM- 176
VL GH+ H + C QF +DD + SA + +R V G+ + +
Sbjct: 297 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII 356
Query: 177 --GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G+ DR +K+W + + GH + V C+ H K +VS + D ++R+WD+
Sbjct: 357 ISGSTDRTLKVWNAETGEC--IHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIET 412
Query: 235 RTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
CL+ ++ +VS A D +++WD TCL+T + R + L
Sbjct: 413 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Score = 40 (19.1 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 493 VWE-RLGHAA-LMQG--NHQIVEMCYQRTKNF 520
+W+ + G +QG HQ C Q KNF
Sbjct: 527 IWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF 558
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 266 (98.7 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 80/281 (28%), Positives = 124/281 (44%)
Query: 22 PWILSSLHNGVIQL-W---DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKV 77
PW + + I W D + +L+ D+H C + VSG DD +KV
Sbjct: 403 PWKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFCGNR----IVSGSDDNTLKV 458
Query: 78 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHY 137
W+ KC+ TL+GH + ++ I+S S D+T+++WN ++ CI L GH
Sbjct: 459 WSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTST 516
Query: 138 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------------MGADDR 181
V C H + VVS S D T+RVWDI + +V G GA D
Sbjct: 517 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDF 574
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
+K+W + +GH N V + F +VS + D SIR+WD+ C++T
Sbjct: 575 MVKVWDPETETC--LHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTL 630
Query: 242 RREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
Q ++VS D ++++WD+ CL T +
Sbjct: 631 TGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 671
Score = 178 (67.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/158 (28%), Positives = 81/158 (51%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A V+ + + +R ++S ++ ++++WD T L H V + F VSG
Sbjct: 555 AAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSG 610
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
D I+VW+ + CI TL GH T+ + ++S + D T++IW+ ++ C+
Sbjct: 611 SLDTSIRVWDVETGNCIHTLTGHQSL--TSGMELKDNILVSGNADSTVKIWDIKTGQCLQ 668
Query: 130 VLTG-HNHY--VMCAQFHPTDDIVVSASLDQTIRVWDI 164
L G H H V C QF+ + V+++S D T+++WD+
Sbjct: 669 TLQGPHKHQSAVTCLQFNK--NFVITSSDDGTVKLWDL 704
Score = 169 (64.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 61/225 (27%), Positives = 98/225 (43%)
Query: 78 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
W K L GH D++ T F I+S SDD T+++W+ + C+ L GH
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 475
Query: 137 YVMCAQFHP-------TDDI--VVSASLDQTIRVW--DISGLR-----KKNVAPGMGADD 180
V +Q TD V +A + I S +R +K V G + D
Sbjct: 476 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG--SRD 533
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+++W + + + + GH V CV + + +VS A D +++WD TCL+T
Sbjct: 534 ATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHT 589
Query: 241 FRREQERFWSEV-----IVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+ R +S +VS + D SIR+WD+ C++T Q
Sbjct: 590 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 634
Score = 149 (57.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 55/268 (20%), Positives = 109/268 (40%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I+S + +++W L H G V + I +SG D +KVWN +
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG 504
Query: 84 KCIFTLLGHLDYIRTTFFHHEYP-----------WILSASDDQTIRIWNWQSRNCIC--- 129
+CI TL GH +R H + W + + + + + C+
Sbjct: 505 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 564
Query: 130 --VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWR 187
V++G + M + P + + T RV+ L+ + G+ D I++W
Sbjct: 565 RRVVSGAYDF-MVKVWDPETETCLHTLQGHTNRVYS---LQFDGIHVVSGSLDTSIRVWD 620
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR---RE 244
+ + GH + S + K ++VS D ++++WD+ CL T + +
Sbjct: 621 VETGNC--IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKH 676
Query: 245 QE-----RFWSEVIVSNAEDKSIRLWDM 267
Q +F ++++++D +++LWD+
Sbjct: 677 QSAVTCLQFNKNFVITSSDDGTVKLWDL 704
Score = 144 (55.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 130 VLTGHN-HYVMCAQF------HPTDDIVV---SASLDQTIR--VWDISGLRKKNVAPGM- 176
VL GH+ H + C QF +DD + SA + +R V G+ + +
Sbjct: 428 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII 487
Query: 177 --GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G+ DR +K+W + + GH + V C+ H K +VS + D ++R+WD+
Sbjct: 488 ISGSTDRTLKVWNAETGEC--IHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIET 543
Query: 235 RTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
CL+ ++ +VS A D +++WD TCL+T + R + L
Sbjct: 544 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 600
Score = 40 (19.1 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 493 VWE-RLGHAA-LMQG--NHQIVEMCYQRTKNF 520
+W+ + G +QG HQ C Q KNF
Sbjct: 658 IWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNF 689
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 234 (87.4 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 44/160 (27%), Positives = 83/160 (51%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F V ++F P + S + +++W + F H VR + F +
Sbjct: 56 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ V+ DD +KVW+ +++ +F+L H++++R F + I+SASDD+T+++W+
Sbjct: 116 QLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
SR C+ H +V FHP+ + +A +D T++VWD
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 203 (76.5 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 56/240 (23%), Positives = 110/240 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVW--NYK 81
+ S + + +W + + +F H+ V + F + SG D +++W N K
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCA 141
+F H +R+ F + +++ASDD+T+++W+ + + LT H ++V CA
Sbjct: 94 GESTVFR--AHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCA 151
Query: 142 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA-----DDRQ----IKLWRMNDS- 191
+F P ++VSAS D+T+++WD + + G D I M+++
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 211
Query: 192 KAWEVDIFR--GHYN----NVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
K W+ R HY V+ + FHP +++ + D ++++ D+ + L T Q
Sbjct: 212 KVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQ 271
Score = 179 (68.1 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 37/162 (22%), Positives = 76/162 (46%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F +A V+ + F ++++ + +++W L +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD 156
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ VS DD +K+W+ R+C+ + H ++ FH I +A D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDT 216
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
++ + H+ V FHP+ + +++AS D T+++ D+
Sbjct: 217 RTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Score = 154 (59.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 36/151 (23%), Positives = 63/151 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S+ + ++LWD + + EH G V + FH + G
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + + + H + FH ++++AS D T++I + + L
Sbjct: 208 DNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
GH F T + S D+ + VW
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 39/152 (25%), Positives = 71/152 (46%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W + + + H N V C F P +IVS ++DK+++LWD T R C
Sbjct: 122 SDDKTVKVWSTHRQRF--LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++++ E F + V I + D ++++WD + ++ L H
Sbjct: 180 VHSYC-EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFH 238
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D+ + + R YT+H +
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/205 (24%), Positives = 83/205 (40%)
Query: 44 LEK-FDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
LE+ F H V + F SG D + +W+ K + + GH D + F
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ S S D+T+RIW + V H V F ++V+AS D+T++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 163 D-------ISGLRKKN-VAPGMGADDRQIKLWRMNDS--KAWE------VDIFRGHYNNV 206
S + N V + D ++ + +D K W+ V + H V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWD 231
+ V FHP I + D ++++WD
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ +++W N K E +FR H V V F +++V+ ++DK++++W ++
Sbjct: 79 GSRDKTVRIWVPN-VKG-ESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQR 136
Query: 237 CLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
L F Q W +IVS ++DK+++LWD T R C++++ E F V
Sbjct: 137 FL--FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC-EHGGFVTYV 193
Query: 288 A-HPTLN-LFAAGHDAGMVVFKFERERPA--YTVH----NNVMYYVKERFLHRLDLTNSK 339
HP+ + AAG D + V+ R Y +H N + ++ +L +T S
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYL----ITASS 249
Query: 340 DSVV 343
DS +
Sbjct: 250 DSTL 253
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ ++ SA V LSFHP +++++ + +++ D LL H+GP + F
Sbjct: 221 LVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Query: 61 NQQPIFVSGGDDYKIKVW 78
F SGG D ++ VW
Sbjct: 281 RTGEYFASGGSDEQVMVW 298
Score = 38 (18.4 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 177 GADDRQIKLWRMN 189
G D Q+ +W+ N
Sbjct: 289 GGSDEQVMVWKSN 301
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 263 (97.6 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 71/232 (30%), Positives = 108/232 (46%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
VSG DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++WN ++
Sbjct: 395 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 452
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------- 175
CI L GH V C H + VVS S D T+RVWDI + +V G
Sbjct: 453 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 510
Query: 176 -----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
GA D +K+W + +GH N V + F +VS + D SIR+W
Sbjct: 511 GRRVVSGAYDFMVKVWDPETETC--LHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVW 566
Query: 231 DMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
D+ C++T Q ++VS D ++++WD+ CL T +
Sbjct: 567 DVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 618
Score = 244 (91.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 68/268 (25%), Positives = 122/268 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I+S + +++W L H G V + I +SG D +KVWN +
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG 451
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+CI TL GH +R H + ++S S D T+R+W+ ++ C+ VL GH V C Q+
Sbjct: 452 ECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 509
Query: 144 HPTDDIVVSASLDQTIRVWD---------ISG-------LRKKNVAPGMGADDRQIKLWR 187
VVS + D ++VWD + G L+ + G+ D I++W
Sbjct: 510 DGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 567
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR---RE 244
+ + GH + S + K ++VS D ++++WD+ CL T + +
Sbjct: 568 VETGNC--IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 623
Query: 245 QE-----RFWSEVIVSNAEDKSIRLWDM 267
Q +F ++++++D +++LWD+
Sbjct: 624 QSAVTCLQFNKNFVITSSDDGTVKLWDL 651
Score = 171 (65.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 61/225 (27%), Positives = 99/225 (44%)
Query: 78 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
W + K L GH D++ T F I+S SDD T+++W+ + C+ L GH
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 422
Query: 137 YVMCAQFHP-------TDDI--VVSASLDQTIRVW--DISGLR-----KKNVAPGMGADD 180
V +Q TD V +A + I S +R +K V G + D
Sbjct: 423 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG--SRD 480
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+++W + + + + GH V CV + + +VS A D +++WD TCL+T
Sbjct: 481 ATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHT 536
Query: 241 FRREQERFWSEV-----IVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+ R +S +VS + D SIR+WD+ C++T Q
Sbjct: 537 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 581
Score = 144 (55.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 130 VLTGHN-HYVMCAQF------HPTDDIVV---SASLDQTIR--VWDISGLRKKNVAPGM- 176
VL GH+ H + C QF +DD + SA + +R V G+ + +
Sbjct: 375 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII 434
Query: 177 --GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G+ DR +K+W + + GH + V C+ H K +VS + D ++R+WD+
Sbjct: 435 ISGSTDRTLKVWNAETGEC--IHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIET 490
Query: 235 RTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
CL+ ++ +VS A D +++WD TCL+T + R + L
Sbjct: 491 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 547
Score = 40 (19.1 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 493 VWE-RLGHAA-LMQG--NHQIVEMCYQRTKNF 520
+W+ + G +QG HQ C Q KNF
Sbjct: 605 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 636
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 263 (97.6 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 71/232 (30%), Positives = 108/232 (46%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
VSG DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++WN ++
Sbjct: 400 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 457
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------- 175
CI L GH V C H + VVS S D T+RVWDI + +V G
Sbjct: 458 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 515
Query: 176 -----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
GA D +K+W + +GH N V + F +VS + D SIR+W
Sbjct: 516 GRRVVSGAYDFMVKVWDPETETC--LHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVW 571
Query: 231 DMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
D+ C++T Q ++VS D ++++WD+ CL T +
Sbjct: 572 DVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 623
Score = 244 (91.0 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 68/268 (25%), Positives = 122/268 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I+S + +++W L H G V + I +SG D +KVWN +
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG 456
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+CI TL GH +R H + ++S S D T+R+W+ ++ C+ VL GH V C Q+
Sbjct: 457 ECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 514
Query: 144 HPTDDIVVSASLDQTIRVWD---------ISG-------LRKKNVAPGMGADDRQIKLWR 187
VVS + D ++VWD + G L+ + G+ D I++W
Sbjct: 515 DGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 572
Query: 188 MNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR---RE 244
+ + GH + S + K ++VS D ++++WD+ CL T + +
Sbjct: 573 VETGNC--IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 628
Query: 245 QE-----RFWSEVIVSNAEDKSIRLWDM 267
Q +F ++++++D +++LWD+
Sbjct: 629 QSAVTCLQFNKNFVITSSDDGTVKLWDL 656
Score = 171 (65.3 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 61/225 (27%), Positives = 99/225 (44%)
Query: 78 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
W + K L GH D++ T F I+S SDD T+++W+ + C+ L GH
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 427
Query: 137 YVMCAQFHP-------TDDI--VVSASLDQTIRVW--DISGLR-----KKNVAPGMGADD 180
V +Q TD V +A + I S +R +K V G + D
Sbjct: 428 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG--SRD 485
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+++W + + + + GH V CV + + +VS A D +++WD TCL+T
Sbjct: 486 ATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHT 541
Query: 241 FRREQERFWSEV-----IVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+ R +S +VS + D SIR+WD+ C++T Q
Sbjct: 542 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 586
Score = 144 (55.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 130 VLTGHN-HYVMCAQF------HPTDDIVV---SASLDQTIR--VWDISGLRKKNVAPGM- 176
VL GH+ H + C QF +DD + SA + +R V G+ + +
Sbjct: 380 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII 439
Query: 177 --GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G+ DR +K+W + + GH + V C+ H K +VS + D ++R+WD+
Sbjct: 440 ISGSTDRTLKVWNAETGEC--IHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIET 495
Query: 235 RTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
CL+ ++ +VS A D +++WD TCL+T + R + L
Sbjct: 496 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 552
Score = 40 (19.1 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 493 VWE-RLGHAA-LMQG--NHQIVEMCYQRTKNF 520
+W+ + G +QG HQ C Q KNF
Sbjct: 610 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 641
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 229 (85.7 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 58/210 (27%), Positives = 106/210 (50%)
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 3 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 62
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMN 189
TGH +V + + ++ S S DQT+RVW ++ K + + ++ W
Sbjct: 63 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPE 119
Query: 190 DS-----KAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRRE 244
S +A ++ GH N V VLFH + I+S A+DK++R+WD + C+ T
Sbjct: 120 SSYSSISEATGSEV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 177
Query: 245 QERFWSEV--------IVSNAEDKSIRLWD 266
E F + + +V+ + D+++++W+
Sbjct: 178 -EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 191 (72.3 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 46/204 (22%), Positives = 93/204 (45%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
I+LWD++ + H+ V + VS D IK+W + C+ T GH
Sbjct: 6 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 65
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV-V 151
+++R + + I S S+DQT+R+W ++ C L H H V C + P +
Sbjct: 66 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 125
Query: 152 SASLDQTIRV--WDISGLRKKNVAPGM--GADDRQIKLWRMNDSKAWEVDIFRGHYNNVS 207
S + + W + G+ + + ADD+ +++W + + + H + V+
Sbjct: 126 SEATGSEVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT--LNAHEHFVT 182
Query: 208 CVLFHPKSEVIVSNAEDKSIRLWD 231
+ FH + +V+ + D+++++W+
Sbjct: 183 SLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 169 (64.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/206 (26%), Positives = 96/206 (46%)
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI------- 164
S D TI++W++Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 165 --SGLRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+G R+ + V P ++D+ +++W + +K + ++ R H + V C+ + P
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISWAP 118
Query: 214 KSEVI-VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTC 272
+S +S A + D R L F + I+S A+DK++R+WD + C
Sbjct: 119 ESSYSSISEATGSEVG-HDNWVRGVL--FHSG-----GKFILSCADDKTLRVWDYKNKRC 170
Query: 273 LNTFRREQERFWVLVAHPTLNLFAAG 298
+ T + L H T G
Sbjct: 171 MKTLNAHEHFVTSLDFHKTAPYVVTG 196
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+G+ FH +ILS + +++WDY+ ++ + HE V + FH P V+G
Sbjct: 139 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 198
Query: 72 DYKIKVW 78
D +KVW
Sbjct: 199 DQTVKVW 205
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 251 (93.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 80/276 (28%), Positives = 126/276 (45%)
Query: 17 FHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI-CFHNQQPIFVSGGDDYK 74
F+ K P I+ +HN + W R N + + + +G+ C VSG D
Sbjct: 186 FYSKLYPKIIRDIHN-IDNNWK-RGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNT 243
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
IK+W+ K C L GH + + + I+S S D T+R+W+ ++ CI L H
Sbjct: 244 IKIWDRKDYSCSRILSGHTGSVLCLQYDNRV--IISGSSDATVRVWDVETGECIKTLIHH 301
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK---KNVAPGMGA-------DDRQIK 184
V+ +F + I+V+ S D++I VWD+ R + V G A DDR I
Sbjct: 302 CEAVLHLRF--ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYI- 358
Query: 185 LWRMNDS--KAWEVDIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
+ D K W +D GH ++C+ + + ++VS + D +IRLWD+
Sbjct: 359 VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGV 416
Query: 237 CLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM 267
CL +E RF + IVS A D I++WD+
Sbjct: 417 CLRVLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDL 452
Score = 222 (83.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 71/253 (28%), Positives = 116/253 (45%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
+T+ +S KG L + + I+S L + I++WD + + H G V +C
Sbjct: 212 MTRINCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LC 267
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ +SG D ++VW+ + +CI TL+ H + + F + +++ S D++I
Sbjct: 268 LQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGI--MVTCSKDRSIA 325
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW + L
Sbjct: 326 VWDMVSPRDITIRRVLVGHRAAVNVVDFD--DRYIVSASGDRTIKVWSMDTLEFVRTLAG 383
Query: 169 -KKNVA----PGM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
++ +A G G+ D I+LW ++ V GH V C+ F K IV
Sbjct: 384 HRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRV--LEGHEELVRCIRFDEKR--IV 439
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 440 SGAYDGKIKVWDL 452
Score = 153 (58.9 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/152 (32%), Positives = 74/152 (48%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI-CFHNQQPIFVSGGDDYKIKVWNYK 81
+I+S+ + I++W M+TL E G RGI C + + VSG D I++W+
Sbjct: 357 YIVSASGDRTIKVWS--MDTL-EFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIH 413
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ---------SRNCICVLT 132
C+ L GH + +R F + I+S + D I++W+ Q S C+C L
Sbjct: 414 SGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVWDLQAALDPRALSSEICLCSLV 471
Query: 133 GHNHYVMCAQFHPTDDI-VVSASLDQTIRVWD 163
H V QF DD +VS+S D TI +WD
Sbjct: 472 QHTGRVFRLQF---DDFQIVSSSHDDTILIWD 500
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 52/175 (29%), Positives = 79/175 (45%)
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-S 165
+I+SAS D+TI++W+ + + L GH + C Q+ +VVS S D TIR+WDI S
Sbjct: 357 YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR--LVVSGSSDNTIRLWDIHS 414
Query: 166 GLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDK 225
G+ + + GH V C+ F K IVS A D
Sbjct: 415 GVCLR---------------------------VLEGHEELVRCIRFDEKR--IVSGAYDG 445
Query: 226 SIRLWDM---------TKRTCL-----NTFRREQERFWSEVIVSNAEDKSIRLWD 266
I++WD+ + CL +T R + +F IVS++ D +I +WD
Sbjct: 446 KIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 251 (93.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 80/276 (28%), Positives = 126/276 (45%)
Query: 17 FHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI-CFHNQQPIFVSGGDDYK 74
F+ K P I+ +HN + W R N + + + +G+ C VSG D
Sbjct: 186 FYSKLYPKIIRDIHN-IDNNWK-RGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNT 243
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
IK+W+ K C L GH + + + I+S S D T+R+W+ ++ CI L H
Sbjct: 244 IKIWDRKDYSCSRILSGHTGSVLCLQYDNRV--IISGSSDATVRVWDVETGECIKTLIHH 301
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK---KNVAPGMGA-------DDRQIK 184
V+ +F + I+V+ S D++I VWD+ R + V G A DDR I
Sbjct: 302 CEAVLHLRF--ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYI- 358
Query: 185 LWRMNDS--KAWEVDIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
+ D K W +D GH ++C+ + + ++VS + D +IRLWD+
Sbjct: 359 VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGV 416
Query: 237 CLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM 267
CL +E RF + IVS A D I++WD+
Sbjct: 417 CLRVLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDL 452
Score = 222 (83.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 71/253 (28%), Positives = 116/253 (45%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
+T+ +S KG L + + I+S L + I++WD + + H G V +C
Sbjct: 212 MTRINCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LC 267
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ +SG D ++VW+ + +CI TL+ H + + F + +++ S D++I
Sbjct: 268 LQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGI--MVTCSKDRSIA 325
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW + L
Sbjct: 326 VWDMVSPRDITIRRVLVGHRAAVNVVDFD--DRYIVSASGDRTIKVWSMDTLEFVRTLAG 383
Query: 169 -KKNVA----PGM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
++ +A G G+ D I+LW ++ V GH V C+ F K IV
Sbjct: 384 HRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRV--LEGHEELVRCIRFDEKR--IV 439
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 440 SGAYDGKIKVWDL 452
Score = 153 (58.9 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/152 (32%), Positives = 74/152 (48%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI-CFHNQQPIFVSGGDDYKIKVWNYK 81
+I+S+ + I++W M+TL E G RGI C + + VSG D I++W+
Sbjct: 357 YIVSASGDRTIKVWS--MDTL-EFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIH 413
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ---------SRNCICVLT 132
C+ L GH + +R F + I+S + D I++W+ Q S C+C L
Sbjct: 414 SGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVWDLQAALDPRALSSEICLCSLV 471
Query: 133 GHNHYVMCAQFHPTDDI-VVSASLDQTIRVWD 163
H V QF DD +VS+S D TI +WD
Sbjct: 472 QHTGRVFRLQF---DDFQIVSSSHDDTILIWD 500
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 52/175 (29%), Positives = 79/175 (45%)
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-S 165
+I+SAS D+TI++W+ + + L GH + C Q+ +VVS S D TIR+WDI S
Sbjct: 357 YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR--LVVSGSSDNTIRLWDIHS 414
Query: 166 GLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDK 225
G+ + + GH V C+ F K IVS A D
Sbjct: 415 GVCLR---------------------------VLEGHEELVRCIRFDEKR--IVSGAYDG 445
Query: 226 SIRLWDM---------TKRTCL-----NTFRREQERFWSEVIVSNAEDKSIRLWD 266
I++WD+ + CL +T R + +F IVS++ D +I +WD
Sbjct: 446 KIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 233 (87.1 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 59/232 (25%), Positives = 100/232 (43%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
+ F P + S + + LW + F H VR + F + V+ DD
Sbjct: 68 VQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
IKVW ++K +F+L H++++R F + I SASDD+T+++W+ SR CI H
Sbjct: 128 IKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEH 187
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-----KKNVAPGMGAD---DRQIKLW 186
+ +FHP+ + +A D+T++VWD+ R + + A +
Sbjct: 188 GGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLIT 247
Query: 187 RMNDSKAWEVDIFRG--------HYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
NDS +D+ G H +CV F + S D+ + +W
Sbjct: 248 ASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 175 (66.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F+ +A V+ + F ++++ + I++W L +H VR F
Sbjct: 98 TVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPD 157
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ S DD +K+W+ R+CI + H + FH I +A D+T+++W+
Sbjct: 158 GRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDV 217
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + H V FHP+ + +++AS D T+++ D+
Sbjct: 218 RMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDL 259
Score = 174 (66.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 53/252 (21%), Positives = 108/252 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ + F + + S + +++W + H+ V + F + SG
Sbjct: 23 ITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSR 82
Query: 72 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
D + +W + K +F H +R+ F + +++ASDD+TI++W + +
Sbjct: 83 DKTVCLWVPSVKGESTVFK--AHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLF 140
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMN 189
L+ H ++V CA+F P ++ SAS D+T+++WD + + G ++
Sbjct: 141 SLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSG 200
Query: 190 --------DS--KAWEVDIFR--GHYN----NVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
D K W+V + R HY V+ + FHP +++ + D ++++ D+
Sbjct: 201 TCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLL 260
Query: 234 KRTCLNTFRREQ 245
+ L T Q
Sbjct: 261 EGRLLYTLHGHQ 272
Score = 172 (65.6 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 38/151 (25%), Positives = 64/151 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I S+ + ++LWD + F EH G + FH + G
Sbjct: 149 VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGT 208
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + + + H + + FH ++++AS+D T++I + + L
Sbjct: 209 DKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTL 268
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
GH C F T D S D+ + VW
Sbjct: 269 HGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 168 (64.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 43/152 (28%), Positives = 74/152 (48%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ IK+W ++ K + H N V C F P +I S ++DK+++LWD T R C
Sbjct: 123 SDDKTIKVWTVHRQKF--LFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSREC 180
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
+++F E F + V I + DK++++WD+ L ++ L H
Sbjct: 181 IHSFC-EHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFH 239
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A +D+ + + R YT+H +
Sbjct: 240 PSGNYLITASNDSTLKILDLLEGRLLYTLHGH 271
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 52/216 (24%), Positives = 89/216 (41%)
Query: 44 LEK-FDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
LE+ F H + + F + SG D +K+W+ K + + L+GH D + F
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ S S D+T+ +W + V H V F +V+AS D+TI+VW
Sbjct: 72 PSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 163 D-------------ISGLRKKNVAPG--MGADDRQIKLWRMNDSKAWE-VDIFRGHYNNV 206
I+ +R +P + A K ++ D + E + F H
Sbjct: 132 TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFA 191
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ V FHP I + DK++++WD+ L ++
Sbjct: 192 NHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQ 227
Score = 139 (54.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 51/184 (27%), Positives = 87/184 (47%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ + LW S E +F+ H V V F + +V+ ++DK+I++W + ++
Sbjct: 80 GSRDKTVCLWV--PSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQK 137
Query: 237 CLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
L F Q W +I S ++DK+++LWD T R C+++F E F V
Sbjct: 138 FL--FSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFC-EHGGFANHV 194
Query: 288 A-HPTLN-LFAAGHDAGMVVFKFERER--PAYTVH----NNVMYYVKERFLHRLDLTNSK 339
HP+ + AAG D + V+ R Y VH N++ ++ +L +T S
Sbjct: 195 EFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYL----ITASN 250
Query: 340 DSVV 343
DS +
Sbjct: 251 DSTL 254
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L ++ +A V LSFHP +++++ ++ +++ D LL H+GP + F
Sbjct: 222 LLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFS 281
Query: 61 NQQPIFVSGGDDYKIKVW 78
F SGG D ++ VW
Sbjct: 282 RTGDFFASGGSDEQVMVW 299
Score = 43 (20.2 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGH 202
G D Q+ +W+ N S A + + H
Sbjct: 290 GGSDEQVMVWKTNFSAADYDGVLKTH 315
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 243 (90.6 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 48/161 (29%), Positives = 84/161 (52%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F V ++F P + S + +++W + F H VR + F +
Sbjct: 87 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDG 146
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
FV+ DD IKVW+ ++K +F+L H++++R F + I+SASDD+T+++W+
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR C+ H +V FHP+ V +A +D T++VWD+
Sbjct: 207 SRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV 247
Score = 203 (76.5 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 59/248 (23%), Positives = 111/248 (44%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
SF+ K+ + S + + +W + + +F H+ V + F + SG D +
Sbjct: 59 SFNMKQ--LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTV 116
Query: 76 KVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
++W N K +F H +R+ F + ++ASDD+TI++W+ + + L+
Sbjct: 117 RIWVPNIKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQ 174
Query: 134 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM----- 188
H ++V CA+F P ++VSAS D+T+++WD + + G +
Sbjct: 175 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVA 234
Query: 189 -----NDSKAWEVDIFR--GHYN----NVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
N K W+V R HY V+ + FHP +V+ + D ++++ D+ +
Sbjct: 235 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRL 294
Query: 238 LNTFRREQ 245
L T Q
Sbjct: 295 LYTLHGHQ 302
Score = 176 (67.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 38/162 (23%), Positives = 75/162 (46%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F +A V+ + F +++ + I++W L +H VR F
Sbjct: 128 TVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPD 187
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ VS DD +K+W+ R+C+ + H ++ FH + +A D T+++W+
Sbjct: 188 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV 247
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
++ + H+ V FHP+ + +V+AS D T+++ D+
Sbjct: 248 RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 289
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ IK+W + K + H N V C F P +IVS ++DK+++LWD T R C
Sbjct: 153 SDDKTIKVWSTHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 210
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++++ E F + V + + D ++++WD+ L ++ L H
Sbjct: 211 VHSYC-EHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 269
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D+ + + R YT+H +
Sbjct: 270 PSGNYLVTASSDSTLKILDLMEGRLLYTLHGH 301
Score = 152 (58.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/151 (23%), Positives = 63/151 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S+ + ++LWD + + EH G V + FH + G
Sbjct: 179 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGM 238
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + + + H + FH ++++AS D T++I + + L
Sbjct: 239 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTL 298
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
GH F T + S D+ + VW
Sbjct: 299 HGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 139 (54.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 53/216 (24%), Positives = 86/216 (39%)
Query: 44 LEK-FDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
LE+ F H V + F SG D + VW+ K + + GH D + F
Sbjct: 42 LERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 101
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ S S D+T+RIW + V H V F V+AS D+TI+VW
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 163 D------ISGLRKK-N-VAPGMGADDRQIKLWRMNDS--KAWE------VDIFRGHYNNV 206
+ L + N V + D ++ + +D K W+ V + H V
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 221
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ V FHP + + D ++++WD+ L ++
Sbjct: 222 TYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQ 257
Score = 137 (53.3 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ +++W N K E +FR H V V F + V+ ++DK+I++W ++
Sbjct: 110 GSRDKTVRIWVPN-IKG-ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 167
Query: 237 CLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
L F Q W +IVS ++DK+++LWD T R C++++ E F V
Sbjct: 168 FL--FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC-EHGGFVTYV 224
Query: 288 A-HPTLN-LFAAGHDAGMVVFKFERER--PAYTVHN 319
HP+ + AAG D + V+ R Y +H+
Sbjct: 225 DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHS 260
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L ++ SA V LSFHP +++++ + +++ D LL H+GP + F
Sbjct: 252 LLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 311
Query: 61 NQQPIFVSGGDDYKIKVW 78
F SGG D ++ VW
Sbjct: 312 RTGEYFASGGSDEQVMVW 329
Score = 38 (18.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 177 GADDRQIKLWRMN 189
G D Q+ +W+ N
Sbjct: 320 GGSDEQVMVWKSN 332
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 225 (84.3 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 57/207 (27%), Positives = 105/207 (50%)
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL--WRMNDS- 191
+V + + ++ S S DQT+RVW ++ K + + ++ W S
Sbjct: 63 REWVRMVRPNQDGTLIASCSNDQTVRVWVVA---TKECKAELREHEHVVECISWAPESSY 119
Query: 192 ----KAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
+A ++ GH N V VLFH + I+S A+DK++R+WD + C+ T E
Sbjct: 120 SSISEATGSEV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EH 176
Query: 248 FWSEV--------IVSNAEDKSIRLWD 266
F + + +V+ + D+++++W+
Sbjct: 177 FVTSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 191 (72.3 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 46/204 (22%), Positives = 93/204 (45%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
I+LWD++ + H+ V + VS D IK+W + C+ T GH
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV-V 151
+++R + + I S S+DQT+R+W ++ C L H H V C + P +
Sbjct: 63 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 122
Query: 152 SASLDQTIRV--WDISGLRKKNVAPGM--GADDRQIKLWRMNDSKAWEVDIFRGHYNNVS 207
S + + W + G+ + + ADD+ +++W + + + H + V+
Sbjct: 123 SEATGSEVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT--LNAHEHFVT 179
Query: 208 CVLFHPKSEVIVSNAEDKSIRLWD 231
+ FH + +V+ + D+++++W+
Sbjct: 180 SLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 161 (61.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 53/202 (26%), Positives = 94/202 (46%)
Query: 116 TIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI---------SG 166
TI++W++Q CI + GH+H V P D +VSAS D+TI++W++ +G
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 167 LRK--KNVAPGMG-------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEV 217
R+ + V P ++D+ +++W + +K + ++ R H + V C+ + P+S
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAEL-REHEHVVECISWAPESSY 119
Query: 218 I-VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTF 276
+S A + D R L F + I+S A+DK++R+WD + C+ T
Sbjct: 120 SSISEATGSEVG-HDNWVRGVL--FHSG-----GKFILSCADDKTLRVWDYKNKRCMKTL 171
Query: 277 RREQERFWVLVAHPTLNLFAAG 298
+ L H T G
Sbjct: 172 NAHEHFVTSLDFHKTAPYVVTG 193
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+G+ FH +ILS + +++WDY+ ++ + HE V + FH P V+G
Sbjct: 136 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 195
Query: 72 DYKIKVW 78
D +KVW
Sbjct: 196 DQTVKVW 202
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 247 (92.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 82/289 (28%), Positives = 125/289 (43%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI-CFHNQQPIFVSGGDDYK 74
S H +I++SL N I ++D T E EG V G+ I VSGG D +
Sbjct: 258 SLHLTPKYIVASLDNAKIHVYD----TNGENQKTLEGHVMGVWAMVPWDNILVSGGCDRE 313
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
++VWN + I+ L GH +R + I S S D T+RIW+ ++ C VL GH
Sbjct: 314 VRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAI-SGSRDTTLRIWDLRTGTCRSVLVGH 372
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-------MGADDRQIKLWR 187
V C H DIVVS S D T RVW IS R G + D R+I
Sbjct: 373 QASVRCLAVH--GDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRRIATGS 430
Query: 188 MNDS-KAWEVD------IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
++ S + W+ + I +GH + V + + +V+ D S+R+W +T+ ++
Sbjct: 431 LDTSVRIWDPNTGQCHAILQGHTSLVGQLQM--SGDTLVTGGSDGSVRVWSLTRMAPIHR 488
Query: 241 FRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
+F + IVS D +++W + L + W
Sbjct: 489 LAAHDNSVTSLQFDNNRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVW 537
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 234 (87.4 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 65/290 (22%), Positives = 130/290 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ + F P W+ S+ + I++W + H+ + I + + S D
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASD 108
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ + K + TL GH +Y+ F+ + I+S S D+ +RIW+ + C ++
Sbjct: 109 DKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMI 168
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS 191
+ H+ V F+ +VVS S D T+R+WD + + N D +++ + + +
Sbjct: 169 SAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIST--EDGKEVSFVKFSPN 226
Query: 192 KAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK--RTCL-NTFRREQERF 248
+ + G +N + + N K ++ + K + C+ +TF +
Sbjct: 227 GKF---VLAGTLDNTLRLWSY--------NNNKKCLKTYTGHKNEKYCIFSTFSVTCGK- 274
Query: 249 WSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
W IV+ +ED I ++++ R + T ++ + HPT N+ A+G
Sbjct: 275 W---IVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321
Score = 203 (76.5 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 46/158 (29%), Positives = 83/158 (52%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP-VRGICFHNQQPIFVSGG 70
V G+ F+ ++S ++G +++WD LL +G V + F ++G
Sbjct: 175 VTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGT 234
Query: 71 DDYKIKVWNYKQ-RKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
D +++W+Y +KC+ T GH + Y I +TF WI++ S+D I I+N Q+R
Sbjct: 235 LDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTRE 294
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ HPT++I+ S +L D+++++W
Sbjct: 295 IVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 184 (69.8 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H + + F S D IK+W K TL GH + I + + I
Sbjct: 45 HLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLIC 104
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
SASDD+TI+IW+ +S + L GH YV F+P +++VS S D+ +R+WD++
Sbjct: 105 SASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVN 160
Score = 167 (63.8 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 49/174 (28%), Positives = 83/174 (47%)
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+TL GHL I + F + W+ SAS D+TI+IW L GH + +
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQD 99
Query: 147 DDIVVSASLDQTIRVWDI-SGLRKKNVAP------GMGADDRQ--IKLWRMNDS-KAWEV 196
++ SAS D+TI++WD+ SG K + G+ + + I +++ + W+V
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDV 159
Query: 197 D------IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRRE 244
+ + H + V+ V F+ ++VS + D ++R+WD T LNT E
Sbjct: 160 NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTE 213
Score = 71 (30.1 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D I ++ + + V GH + V V HP +I S A +D+S+++W
Sbjct: 279 GSEDNLIYIYNLQTREI--VQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 39 (18.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 172 VAPGMGADDRQIKLWR 187
+A G DR +K+W+
Sbjct: 318 IASGALEKDRSVKIWK 333
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 243 (90.6 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 85/328 (25%), Positives = 149/328 (45%)
Query: 16 SFHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI-CFHNQQPIFVSGGDDY 73
SFH + P I++ + + + W + +L + + +G+ C VSG D
Sbjct: 173 SFHRELFPKIMNDI-DSIENNWRTGRH-MLRRINCRSENSKGVYCLQYDDGKIVSGLRDN 230
Query: 74 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
IK+W+ +C+ TL+GH + + + I+S S D T+R+W+ + + L
Sbjct: 231 TIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKV--IISGSSDSTVRVWDVNTGEMVNTLIH 288
Query: 134 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDI---SGLRKKNVAPGMGA-----D------ 179
H V+ +F+ + ++V+ S D++I VWD+ S + + V G A D
Sbjct: 289 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYI 346
Query: 180 -----DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
DR IK+W + S V GH ++C+ + + ++VS + D SIRLWD+
Sbjct: 347 VSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNSIRLWDIEC 402
Query: 235 RTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM---------TKRTCLNTFRREQ 280
CL +E RF ++ IVS A D I++WD+ + CLNT
Sbjct: 403 GACLRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHT 462
Query: 281 ERFWVLVAHPTLNLFAAGHDAGMVVFKF 308
R + L + ++ HD ++++ F
Sbjct: 463 GRVFRL-QFDEFQIVSSSHDDTILIWDF 489
Score = 151 (58.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 55/179 (30%), Positives = 79/179 (44%)
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
+I+SAS D+TI++W+ + + L GH + C Q+ D +VVS S D +IR+WDI
Sbjct: 345 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNSIRLWDIE- 401
Query: 167 LRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
GA R + GH V C+ F K IVS A D
Sbjct: 402 ---------CGACLR----------------VLEGHEELVRCIRFDTKR--IVSGAYDGK 434
Query: 227 IRLWDM---------TKRTCLNTFRREQERFW----SEV-IVSNAEDKSIRLWDMTKRT 271
I++WD+ + CLNT R + E IVS++ D +I +WD T
Sbjct: 435 IKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHDDTILIWDFLNFT 493
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 240 (89.5 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 68/246 (27%), Positives = 110/246 (44%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F V + F P + SS + ++LW + F H G VR +CF
Sbjct: 55 RFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADG 114
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
++ DD IK+W+ ++K I TL H +++R F + ++S SDD+T+++W+
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Query: 124 SRNCI---CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKKNV-APGM 176
SR I C G++ YV FHP+ + +AS D T+RVWDI L+ V + +
Sbjct: 175 SRQLIHTFCEPGGYSSYV---DFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAV 231
Query: 177 GA----DDRQIKLWRMNDSKAWEVDIFRG--------HYNNVSCVLFHPKSEVIVSNAED 224
A L +DS +D+ G H + SCV F + S D
Sbjct: 232 NALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSD 291
Query: 225 KSIRLW 230
+ + +W
Sbjct: 292 QQVMVW 297
Score = 222 (83.2 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 57/252 (22%), Positives = 112/252 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ L F P I S + + +W+ + + +F H+ V + F + S
Sbjct: 21 ITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSR 80
Query: 72 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
D +++W + K +F H +R+ F + +L+ASDDQ+I++W+ + IC
Sbjct: 81 DKTVRLWVPSVKGESVLFR--AHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIIC 138
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM- 188
L HN++V CA+F P ++VS S D+T+++WD S + + G +
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSS 198
Query: 189 ---------NDSKAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
N + W++ ++ H V+ + FHP +++ + D ++++ D+
Sbjct: 199 TCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLL 258
Query: 234 KRTCLNTFRREQ 245
+ L T Q
Sbjct: 259 EGRLLYTLHGHQ 270
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/152 (28%), Positives = 76/152 (50%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ IKLW ++ K + R H N V C F P +++VS ++D++++LWD + R
Sbjct: 121 SDDQSIKLWSVHRQKI--ICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQL 178
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++TF E + S V I + + D ++R+WD+ T L ++ L H
Sbjct: 179 IHTFC-EPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFH 237
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D+ + + R YT+H +
Sbjct: 238 PSGNHLLTASSDSTLKILDLLEGRLLYTLHGH 269
Score = 169 (64.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 55/217 (25%), Positives = 89/217 (41%)
Query: 42 TLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 101
TL F H + + F SG D + VWN K + + GH D + F
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQF 68
Query: 102 HHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 161
+ S+S D+T+R+W + + H V F +++AS DQ+I++
Sbjct: 69 SPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKL 128
Query: 162 WD------ISGLRKKN--VAPGMGADDRQIKLWRMNDS--KAWE------VDIFRGHYNN 205
W I LR+ N V + D Q+ + +D K W+ + F
Sbjct: 129 WSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGY 188
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
S V FHP S I + + D ++R+WD+ T L ++
Sbjct: 189 SSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQ 225
Score = 130 (50.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 29/104 (27%), Positives = 59/104 (56%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ ++LW + K V +FR H +V V F + +++ ++D+SI+LW + ++ +
Sbjct: 81 DKTVRLW-VPSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIIC 138
Query: 240 TFRREQE-----RFW--SEVIVSNAEDKSIRLWDMTKRTCLNTF 276
T R RF +++VS ++D++++LWD + R ++TF
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTF 182
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 177 GADDRQIKLWRMN-DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
G+ D + +W M S+A+ F GH + V+CV F P + ++ S++ DK++RLW + +
Sbjct: 36 GSVDASVMVWNMKPQSRAYR---FTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVK 92
Query: 236 TCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVA 288
FR S + +++ ++D+SI+LW + ++ + T R WV A
Sbjct: 93 GESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNN--WVRCA 150
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 179 (68.1 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
+ S +G I++W L F+ H G V + F+ I VSG D ++ VW+
Sbjct: 74 LASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITE 133
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+F L GH D I + ++++S D I+IW+ ++++CI + GH + +
Sbjct: 134 SGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDV 193
Query: 144 HPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGM 176
+P + + S + D IR W I S R++ G+
Sbjct: 194 NPDETRLCSCTSDNQIRFWRIPSNERQREDGSGI 227
Score = 131 (51.2 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 30/131 (22%), Positives = 62/131 (47%)
Query: 167 LRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
L K G D I++W M+D + V F GH +V+ + F+ ++VS ++D
Sbjct: 67 LSKDGALLASGYSDGSIRIWSMSDYQLQAV--FNGHRGSVTTMTFNRLGNILVSGSKDTE 124
Query: 227 IRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRRE 279
+ +WD+ + L R +++ S ++++++D I++WD + C+ T
Sbjct: 125 VIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGH 184
Query: 280 QERFWVLVAHP 290
+ W + +P
Sbjct: 185 RNPIWGIDVNP 195
Score = 129 (50.5 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 31/135 (22%), Positives = 60/135 (44%)
Query: 33 IQLWDYRMNTLLEKFDEHE--GPVRGICFHNQQPIFVSGGDDYKIKVWNYK--QRKCIFT 88
I +WD R L + E + V +C + SG D I++W+ Q + +F
Sbjct: 39 ISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFN 98
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDD 148
GH + T F+ ++S S D + +W+ + + + L GH + + +
Sbjct: 99 --GHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSN 156
Query: 149 IVVSASLDQTIRVWD 163
++++S D I++WD
Sbjct: 157 HLITSSKDGFIKIWD 171
Score = 126 (49.4 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 40/177 (22%), Positives = 79/177 (44%)
Query: 150 VVSASLDQTIRVW-DISGLRKK--NVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
V++ SL +T++V D+ L+ N + D +K++ D+ + + ++ GH V
Sbjct: 519 VLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIF-YTDTVKFHLSLY-GHKLPV 576
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-------SEVIVSNAED 259
C+ S +I++ + DK+I++W + C +F + + +S ++D
Sbjct: 577 MCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKD 636
Query: 260 KSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG-HDAGMVVFKFERERPAY 315
K I+ WD K + T W L + F +G HD + +F + E P +
Sbjct: 637 KRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN-QTETPIF 692
Score = 118 (46.6 bits), Expect = 3.1e-16, Sum P(3) = 3.1e-16
Identities = 30/117 (25%), Positives = 56/117 (47%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ IK+W ++ + F H +++ V F P + +S ++DK I+ WD K
Sbjct: 591 GSADKNIKIWGLDYGDCHKS--FFAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADKFE 648
Query: 237 CLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCL--NTFRREQERFW 284
+ T WS + +S + D+SIR+++ T+ + +RE E+ W
Sbjct: 649 HIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFNQTETPIFVESDRQREMEQTW 705
Score = 85 (35.0 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 23/116 (19%), Positives = 49/116 (42%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F V ++F+ ++S + + +WD + L + H + + +
Sbjct: 97 FNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSN 156
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
++ D IK+W+ + + CI T++GH + I + + + S + D IR W
Sbjct: 157 HLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 73 (30.8 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
GH IR+ ++S S + ++++WN +S +CI + Y +C F P + V
Sbjct: 394 GHRSDIRSLSLSSNDQMLVSTSSE-SVKVWNMKSLSCIRSIACD--YGLCTVFAPGNLHV 450
Query: 151 VSASLDQTIRVWDIS 165
+ + TI V++++
Sbjct: 451 IVGTKTGTIEVFELA 465
Score = 44 (20.5 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 18/80 (22%), Positives = 33/80 (41%)
Query: 461 FVKDDRTR-LTLALECG-NIDIALEAARVLEDKSVWERLGHAALMQGNHQI--VEMCYQR 516
FV+ DR R + E D + +LE+ + + +M G + +E+C Q
Sbjct: 692 FVESDRQREMEQTWEATLEDDTRMRTKEMLEENAAAGKQTLETIMAGEDILDAIELCVQE 751
Query: 517 TKNFDKLAFLYLITGNLEKL 536
D+ L T N +++
Sbjct: 752 KFKIDEYEKLLKTTKNQDEI 771
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 239 (89.2 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 46/161 (28%), Positives = 83/161 (51%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F V ++F P + S + +++W + F H VR + F +
Sbjct: 18 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 77
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
FV+ DD +KVW ++K +F+L H++++R F + I+SASDD+T+++W+
Sbjct: 78 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 137
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR C+ H +V FHP+ + +A +D T++VWD+
Sbjct: 138 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 178
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 56/231 (24%), Positives = 105/231 (45%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVW--NYKQRKCIFTLL 90
+ +W + + +F H+ V + F + SG D +++W N K +F
Sbjct: 5 LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFR-- 62
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
H +R+ F + ++ASDD+T+++W + + L+ H ++V CA+F P ++
Sbjct: 63 AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 122
Query: 151 VSASLDQTIRVWDISGLRKKNVAPGMGA-----DDRQ----IKLWRMNDS-KAWEVDIFR 200
VSAS D+T+++WD S + G D I M+++ K W+V R
Sbjct: 123 VSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHR 182
Query: 201 --GHYNNVSCVL----FHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
HY S + FHP +++ + D ++++ D+ + L T Q
Sbjct: 183 LLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQ 233
Score = 171 (65.3 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 37/162 (22%), Positives = 75/162 (46%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F +A V+ + F +++ + +++W L +H VR F
Sbjct: 59 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 118
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ VS DD +K+W+ R+C+ + H ++ FH I +A D T+++W+
Sbjct: 119 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 178
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
++ + H+ V FHP+ + +++AS D T+++ D+
Sbjct: 179 RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 220
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W + K + H N V C F P +IVS ++DK+++LWD + R C
Sbjct: 84 SDDKTVKVWATHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC 141
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++++ E F + V I + D ++++WD+ L ++ L H
Sbjct: 142 VHSYC-EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFH 200
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D+ + + R YT+H +
Sbjct: 201 PSGNYLITASSDSTLKILDLMEGRLLYTLHGH 232
Score = 152 (58.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/151 (23%), Positives = 63/151 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S+ + ++LWD + + EH G V + FH + G
Sbjct: 110 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 169
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + + + H + FH ++++AS D T++I + + L
Sbjct: 170 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 229
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
GH F T + S D+ + VW
Sbjct: 230 HGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 134 (52.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ +++W N K E +FR H V V F + V+ ++DK++++W ++
Sbjct: 41 GSRDKTVRIWVPN-VKG-ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQK 98
Query: 237 CLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
L F Q W +IVS ++DK+++LWD + R C++++ E F V
Sbjct: 99 FL--FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYC-EHGGFVTYV 155
Query: 288 A-HPTLN-LFAAGHDAGMVVFKFERER--PAYTVH----NNVMYYVKERFLHRLDLTNSK 339
HP+ + AAG D + V+ R Y +H N + ++ +L +T S
Sbjct: 156 DFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYL----ITASS 211
Query: 340 DSVV 343
DS +
Sbjct: 212 DSTL 215
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L ++ SA V GLSFHP +++++ + +++ D LL H+GP + F
Sbjct: 183 LLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 242
Query: 61 NQQPIFVSGGDDYKIKVW 78
F SGG D ++ VW
Sbjct: 243 RTGEYFASGGSDEQVMVW 260
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 45/187 (24%), Positives = 76/187 (40%)
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D + VW+ K + + GH D + F + S S D+T+RIW + V
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD------ISGLRKK-N-VAPGMGADDRQI 183
H V F V+AS D+T++VW + L + N V + D ++
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 184 KLWRMNDS--KAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
+ +D K W+ V + H V+ V FHP I + D ++++WD+
Sbjct: 122 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 181
Query: 236 TCLNTFR 242
L ++
Sbjct: 182 RLLQHYQ 188
Score = 38 (18.4 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 177 GADDRQIKLWRMN 189
G D Q+ +W+ N
Sbjct: 251 GGSDEQVMVWKSN 263
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 248 (92.4 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 67/267 (25%), Positives = 117/267 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + F P ++S ++ +++WD LL+ D H G V + F + SG
Sbjct: 753 VESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSY 812
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D I +W+ + + T GH I + F + + SASDD TI+IW+ + L
Sbjct: 813 DNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTL 872
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMG--------ADDRQ 182
H+ V F P ++ S+SLD TI+VW+ +G ++++ G D ++
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK 932
Query: 183 IKLW-RMNDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
+ N K W + GH +V V F P + + S++ D +I+LW+ T
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG 992
Query: 236 TCLNTFRREQERFWSEVIVSNAEDKSI 262
TF+ W + + + K +
Sbjct: 993 ELQQTFKGHD--LWIRAVAFSPDGKHL 1017
Score = 244 (91.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 67/273 (24%), Positives = 126/273 (46%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
++ S V+ ++F P + SS + I++W+ L + + G V+ + F
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK 932
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
SG + +K+WN + + TL GH +R+ F + + S+S D TI++WN +
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG 992
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI--SGLRK------KNV-APGM 176
GH+ ++ F P +VS S D TI++WD+ S L++ ++V A
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAF 1052
Query: 177 GADDRQIKLWRMNDS-KAWEV---DIFR---GHYNNVSCVLFHPKSEVIVSNAEDKSIRL 229
DD+Q+ ++ + K W+ ++ R GH V V F P +++ SN+ D +I+L
Sbjct: 1053 SPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKL 1112
Query: 230 WDMTKRTCLNTFRREQERFWSEVIVSNAEDKSI 262
W+ T + W + + + + K +
Sbjct: 1113 WNPLTGELQQTLTGRSD--WVDSVAFSPDGKQL 1143
Score = 242 (90.2 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 75/281 (26%), Positives = 115/281 (40%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E +S VK ++F P + S ++LW+ LL+ + H VR + F
Sbjct: 915 EGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQ 974
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
S D IK+WN + T GH +IR F + ++S SDD TI++W+ +
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQI-- 183
L H+ V F P D + S+SLD TI++WD + + G R +
Sbjct: 1035 ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTF 1094
Query: 184 ----KLWRMN--DS--KAW-----EVD-IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRL 229
KL N D K W E+ G + V V F P + + S D +I+L
Sbjct: 1095 SPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKL 1154
Query: 230 WDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKR 270
WD L T +R S V + + + +D T +
Sbjct: 1155 WDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAK 1195
Score = 230 (86.0 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 65/276 (23%), Positives = 121/276 (43%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E S V+ ++F P + SS + I+LW+ L + F H+ +R + F
Sbjct: 952 LLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFS 1011
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
VSG DD IK+W+ + +L H + F + + S+S D TI++W
Sbjct: 1012 PDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLW 1071
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNV------- 172
+ + L GH+ V F P ++ S S D TI++W+ ++G ++ +
Sbjct: 1072 DSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWV 1131
Query: 173 -APGMGADDRQIKLWRMNDS-KAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAED 224
+ D +Q+ + + K W+ + GH + + V+F P +++ S + D
Sbjct: 1132 DSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYD 1191
Query: 225 KSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDK 260
++ +LWD L F + W E + + + K
Sbjct: 1192 QTAKLWDPATGELLQIFEGHSK--WVESVAFSPDGK 1225
Score = 225 (84.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 73/298 (24%), Positives = 124/298 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
++ ++F P ++S + I+LWD + L + ++H V + F S
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL 1064
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ + TL GH +R+ F + + S S D TI++WN + L
Sbjct: 1065 DSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTL 1124
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD---------ISGL--RKKNV--AP---- 174
TG + +V F P + S D TI++WD + G R ++V +P
Sbjct: 1125 TGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKL 1184
Query: 175 -GMGADDRQIKLWRMNDSKAWEV-DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
G+ D+ KLW D E+ IF GH V V F P +++ S++ ++I+LWD
Sbjct: 1185 LASGSYDQTAKLW---DPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDP 1241
Query: 233 TKRTCLNTFRREQERFWSEVI------VSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
L T E S +++ + ++WD L + + W
Sbjct: 1242 VTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKIWDPATGELLQALKGHSKWVW 1299
Score = 219 (82.2 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 62/248 (25%), Positives = 108/248 (43%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L + S V+ L+F P + S ++ I LWD LL+ F+ H + + F
Sbjct: 784 LLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFA 843
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
S DD IK+W+ + TL H +R+ F + + S+S D TI++W
Sbjct: 844 PDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD---------ISGLRKKN 171
N + L G + +V F P + S S T+++W+ + G +
Sbjct: 904 NPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSV 963
Query: 172 VAPGMGADDRQIKLWRMNDS-KAW-----EVD-IFRGHYNNVSCVLFHPKSEVIVSNAED 224
+ D +Q+ + + K W E+ F+GH + V F P + +VS ++D
Sbjct: 964 RSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDD 1023
Query: 225 KSIRLWDM 232
+I+LWD+
Sbjct: 1024 NTIKLWDL 1031
Score = 208 (78.3 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 58/247 (23%), Positives = 107/247 (43%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L FE + ++F P + S+ + I++WD L + D H VR + F
Sbjct: 826 LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFS 885
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ S D IKVWN + +L G ++++ F + + S S+ T+++W
Sbjct: 886 PDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLW 945
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNV------- 172
N + + L GH+ V F P + S+S D TI++W+ +G ++
Sbjct: 946 NPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWI 1005
Query: 173 -APGMGADDRQIKLWRMNDS-KAWEV------DIFRGHYNNVSCVLFHPKSEVIVSNAED 224
A D + + +++ K W++ H +V V F P + + S++ D
Sbjct: 1006 RAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLD 1065
Query: 225 KSIRLWD 231
+I+LWD
Sbjct: 1066 STIKLWD 1072
Score = 187 (70.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 44/162 (27%), Positives = 79/162 (48%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E S V+ ++F P + S+ ++G I+LW+ L + V + F
Sbjct: 1083 EGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQ 1142
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
SG D IK+W+ + + TL GH D I++ F + + S S DQT ++W+ +
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATG 1202
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISG 166
+ + GH+ +V F P ++ S+S +TI++WD ++G
Sbjct: 1203 ELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTG 1244
Score = 184 (69.8 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 65/268 (24%), Positives = 104/268 (38%)
Query: 32 VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLG 91
V Q W TL + H GPV + F VSG D +K+W+ + + TL G
Sbjct: 735 VEQTWSAEQQTL----ENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDG 790
Query: 92 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 151
H + + F + + S S D TI +W+ + + GH H + F P +
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELA 850
Query: 152 SASLDQTIRVWDISGLRKKNVAPGMGADDRQI------KLWRMN--DS--KAW-----EV 196
SAS D TI++WD++ + R + KL + DS K W E+
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 197 D-IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVS 255
G V V F P + + S +E +++LW+ L T + S
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP 970
Query: 256 NAEDKSIRLWDMTKRTCLNTFRREQERF 283
+ + + D T + +T Q+ F
Sbjct: 971 DGKQLASSSSDTTIKLWNSTTGELQQTF 998
Score = 141 (54.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/156 (21%), Positives = 68/156 (43%)
Query: 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV 67
+S V ++F P + S ++ I+LWD LL+ + H ++ + F +
Sbjct: 1127 RSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLA 1186
Query: 68 SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
SG D K+W+ + + GH ++ + F + + S+S +TI++W+ +
Sbjct: 1187 SGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGEL 1246
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
+ L + F P + + S + T ++WD
Sbjct: 1247 LQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIWD 1281
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 203 (76.5 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 48/165 (29%), Positives = 75/165 (45%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G+SF P ++LS + ++LW T L + H PV + F FV+
Sbjct: 517 SGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVT 576
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D ++W + GH++ + FH ++ + S D+T R+W+ + NC+
Sbjct: 577 ASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCV 636
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNV 172
V GH + V C P + S D I VWDI SG R K++
Sbjct: 637 RVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSM 681
Score = 169 (64.5 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV G+ F +S +D +++W+ + + GH + F + +
Sbjct: 516 HSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFV 575
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+AS DQT R+W + + GH + V C +FHP + V + S D+T R+WD+
Sbjct: 576 TASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDV 630
Score = 156 (60.0 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 52/214 (24%), Positives = 90/214 (42%)
Query: 59 FHNQQPIFVSGGDDYKIKVWNY--KQRKCIFT------------LLGHLDYIRTTFFHHE 104
F++ + +G D IK+W+ K K + L+GH + F +
Sbjct: 469 FNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPD 528
Query: 105 YPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
++LS S+D+T+R+W+ + + GH V +F P V+AS DQT R+W
Sbjct: 529 NKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWAT 588
Query: 165 SGLRKKNVAPGMGADDRQIK-------LWRMNDSKA---WEVD------IFRGHYNNVSC 208
+ + G D ++ ++ + K W+V +F GH N+V+C
Sbjct: 589 DHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNC 648
Query: 209 VLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ P + S ED I +WD+ L + R
Sbjct: 649 LAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMR 682
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 41/172 (23%), Positives = 74/172 (43%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH- 60
L ++ + V + F P + +++ H+ +LW L F H V + FH
Sbjct: 552 LVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHP 611
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
N +F +G D ++W+ C+ LGH + + + W+ S +D I +W
Sbjct: 612 NSNYVF-TGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVW 670
Query: 121 NWQSRNCICVLTGHNHYVMCA-QFHPTDDIVVSASLDQTIRVWDISGLRKKN 171
+ S + + GH + + F ++VS D ++RVWD+ KKN
Sbjct: 671 DIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV----KKN 718
Score = 128 (50.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ ++W ++ V +F GH N+V+C+ P + S ED I +WD+
Sbjct: 619 GSSDKTCRMWDVHTGNC--VRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGR 676
Query: 237 CLNTFR-REQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF 283
L + R + +S V+VS D S+R+WD+ K T N E E F
Sbjct: 677 RLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKNT--NDAGPEPEAF 729
Score = 126 (49.4 bits), Expect = 0.00048, P = 0.00048
Identities = 50/205 (24%), Positives = 86/205 (41%)
Query: 108 ILSASDDQT-IRIWNWQ-SRNCICVLTGHN--HYVMCAQFHPTDDIVVSASLDQTIRVWD 163
I+ D ++ I++ Q S +C+ T HN + + C +F+ +V + D I++W
Sbjct: 430 IIQVEDSRSKIKLGAIQASLPSVCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWS 489
Query: 164 ISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAE 223
+ G K+V DR + N K GH V V F P ++ ++S +E
Sbjct: 490 LDGKPLKSVLKR----DRHKP--QENTRK------LIGHSGPVYGVSFSPDNKYLLSCSE 537
Query: 224 DKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTF 276
DK++RLW + T L +++ + W V+ + D++ RLW L F
Sbjct: 538 DKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIF 597
Query: 277 RREQERFWVLVAHPTLN-LFAAGHD 300
+ HP N +F D
Sbjct: 598 AGHINDVDCVEFHPNSNYVFTGSSD 622
Score = 80 (33.2 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYN-NVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
G +D I +W + + + RGH ++ + F V+VS D S+R+WD+ K
Sbjct: 661 GGEDGIICVWDIGSGR--RLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKN 718
Query: 236 TCLNTFRREQERFWSEV 252
T N E E F + V
Sbjct: 719 T--NDAGPEPEAFNNNV 733
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 241 (89.9 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 46/161 (28%), Positives = 84/161 (52%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F V ++F P + S + +++W + F H VR + F +
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
FV+ DD +KVW+ ++K +F+L H++++R F + I+SASDD+T+++W+
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR C+ H +V FHP+ + +A +D T++VWD+
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Score = 204 (76.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 60/252 (23%), Positives = 113/252 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F + S + + +W + T +F H+ V + F + SG
Sbjct: 22 VTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSR 81
Query: 72 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
D +++W N K +F H +R+ F + ++ASDD+T+++W+ + +
Sbjct: 82 DKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLF 139
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA-----DDRQ-- 182
L+ H ++V CA+F P ++VSAS D+T+++WD + + G D
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 183 --IKLWRMNDS-KAWEVDIFR--GHYN----NVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
I M+++ K W+V R HY V+ + FHP +V+ + D ++++ D+
Sbjct: 200 TCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLM 259
Query: 234 KRTCLNTFRREQ 245
+ L T Q
Sbjct: 260 EGRLLYTLHGHQ 271
Score = 176 (67.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 38/162 (23%), Positives = 75/162 (46%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F +A V+ + F +++ + +++W L +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ VS DD +K+W+ R+C+ + H ++ FH I +A D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
++ + H+ V FHP+ + +V+AS D T+++ D+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258
Score = 159 (61.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W + K + H N V C F P +IVS ++DK+++LWD T R C
Sbjct: 122 SDDKTVKVWSTHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++++ E F + V I + D ++++WD+ L ++ L H
Sbjct: 180 VHSYC-EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 238
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D+ + + R YT+H +
Sbjct: 239 PSGNYLVTASSDSTLKILDLMEGRLLYTLHGH 270
Score = 153 (58.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 36/151 (23%), Positives = 63/151 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S+ + ++LWD + + EH G V + FH + G
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + + + H + FH ++++AS D T++I + + L
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTL 267
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
GH F T + S D+ + VW
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 140 (54.3 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 53/216 (24%), Positives = 86/216 (39%)
Query: 44 LEK-FDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
LE+ F H V + F SG D + VW+ K + + GH D + F
Sbjct: 11 LERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ S S D+T+RIW + V H V F V+AS D+T++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 163 D------ISGLRKK-N-VAPGMGADDRQIKLWRMNDS--KAWE------VDIFRGHYNNV 206
+ L + N V + D ++ + +D K W+ V + H V
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ V FHP I + D ++++WD+ L ++
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQ 226
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ +++W N K E +FR H V V F + V+ ++DK++++W ++
Sbjct: 79 GSRDKTVRIWVPN-VKG-ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQK 136
Query: 237 CLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
L F Q W +IVS ++DK+++LWD T R C++++ E F V
Sbjct: 137 FL--FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC-EHGGFVTYV 193
Query: 288 A-HPTLN-LFAAGHDAGMVVFKFERER--PAYTVHN 319
HP+ + AAG D + V+ R Y +H+
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L ++ SA V LSFHP +++++ + +++ D LL H+GP + F
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Query: 61 NQQPIFVSGGDDYKIKVW 78
F SGG D ++ VW
Sbjct: 281 RTGEYFASGGSDEQVMVW 298
Score = 38 (18.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 177 GADDRQIKLWRMN 189
G D Q+ +W+ N
Sbjct: 289 GGSDEQVMVWKSN 301
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 199 (75.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 59/226 (26%), Positives = 106/226 (46%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
++S + + +WD +L K H G V + F ++ + VSG D I +W+++ R
Sbjct: 234 MVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNR 293
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN----CICVLTGHNHYVM 139
+ + GH D + Y I+S+S D T R+W + + C+ VL GH V
Sbjct: 294 RPLKVYFGHTDNVLGVVVSENY--IISSSRDHTARVWRLDATSPAEACMHVLRGHLASVN 351
Query: 140 CAQFHPTDDIVVSASLDQTIRVWDIS-G--LR-----KKNVAPGM--G----ADDRQIKL 185
Q+ ++V+AS D+T+R WDI+ G +R ++ +A G + + +
Sbjct: 352 SVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGSSDLTI 411
Query: 186 WRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
S + + +GH + + V F+ E IVS D ++R+W+
Sbjct: 412 RIFEASSGKLLRMLQGHEDLIRTVRFN--DEKIVSGGYDGTVRIWN 455
Score = 185 (70.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 52/196 (26%), Positives = 92/196 (46%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L K S V L F +R ++S + I +WD++ L+ + H V G+
Sbjct: 253 ILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVV- 311
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRK----CIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
+ +S D+ +VW C+ L GHL + + + + I++AS D+T
Sbjct: 312 -SENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRT 370
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 176
+R W+ + +CI ++ H + CAQ++ +VS S D TIR+++ S + +
Sbjct: 371 LRTWDITTGHCIRIIHAHQRGIACAQYN--GKFIVSGSSDLTIRIFEASSGKLLRML--Q 426
Query: 177 GADDRQIKLWRMNDSK 192
G +D I+ R ND K
Sbjct: 427 GHEDL-IRTVRFNDEK 441
Score = 157 (60.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 58 CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 117
C I VSG D + VW+ R ++ L GH + F ++S S D TI
Sbjct: 226 CVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTI 285
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
IW+WQ+R + V GH V+ +++ ++S+S D T RVW
Sbjct: 286 IIWDWQNRRPLKVYFGHTDNVLGVVV--SENYIISSSRDHTARVW 328
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 46/161 (28%), Positives = 70/161 (43%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI-CFHNQQPIFVS 68
A V + + K I+++ + ++ WD + H+ RGI C VS
Sbjct: 348 ASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQ---RGIACAQYNGKFIVS 404
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
G D I+++ K + L GH D IRT F+ E I+S D T+RIWN+ +
Sbjct: 405 GSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEK--IVSGGYDGTVRIWNFNTGEQH 462
Query: 129 CVL-TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 167
CVL N V QF +++ + I VW+ GL
Sbjct: 463 CVLHNSRNSRVFGLQFDHRR--IIACTHSSEILVWNFDDGL 501
Score = 133 (51.9 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 40/180 (22%), Positives = 84/180 (46%)
Query: 180 DRQIKLWRMNDSKAWE--VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
D ++WR++ + E + + RGH +V+ V + K+ +IV+ + D+++R WD+T C
Sbjct: 322 DHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHC 381
Query: 238 LNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
+ Q ++ + IVS + D +IR+++ + L + ++ V
Sbjct: 382 IRIIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRT-VRFNDE 440
Query: 293 NLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKE-RFLHR--LDLTNSKDSVVMQLRGG 349
+ + G+D + ++ F +HN+ V +F HR + T+S + +V G
Sbjct: 441 KIVSGGYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQFDHRRIIACTHSSEILVWNFDDG 500
Score = 37 (18.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 936 VLHIVRNSRLVG 947
VLH RNSR+ G
Sbjct: 464 VLHNSRNSRVFG 475
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 239 (89.2 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 46/161 (28%), Positives = 84/161 (52%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F V ++F P + S + +++W + F H VR + F +
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+ DD +KVW+ ++K +F+L H++++R F + I+SASDD+T+++W+
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR C+ H +V FHP+ + +AS+D T++VWD+
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDV 216
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/252 (22%), Positives = 114/252 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ + F + S + + +W + + +F H+ V + F + SG
Sbjct: 22 ITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSR 81
Query: 72 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
D +++W N K +F H +R+ F + +++ASDD+T+++W+ + +
Sbjct: 82 DKTVRIWIPNVKGESTVFR--AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLF 139
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA-----DDRQ-- 182
L+ H ++V CA+F P ++VSAS D+T+++WD + + G D
Sbjct: 140 SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 183 --IKLWRMNDS-KAWEVDIFR--GHYN----NVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
I M+++ K W+V R HY V+ + FHP +++ + D ++++ D+
Sbjct: 200 TCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLM 259
Query: 234 KRTCLNTFRREQ 245
+ L T Q
Sbjct: 260 EGRLLYTLHGHQ 271
Score = 179 (68.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 38/162 (23%), Positives = 77/162 (47%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F +A V+ + F ++++ + +++W L +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPD 156
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ VS DD +K+W+ R+C+ + H ++ FH I +AS D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDV 216
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
++ + H+ V FHP+ + +++AS D T+++ D+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDL 258
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 41/152 (26%), Positives = 73/152 (48%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W + K + H N V C F P +IVS ++DK+++LWD T R C
Sbjct: 122 SDDKTVKVWSTHRQKF--LFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSREC 179
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++++ E F + V I + + D ++++WD+ L ++ L H
Sbjct: 180 VHSYC-EHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 238
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D+ + + R YT+H +
Sbjct: 239 PSGNYLLTASSDSTLKILDLMEGRLLYTLHGH 270
Score = 149 (57.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 36/151 (23%), Positives = 62/151 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S+ + ++LWD + + EH G V + FH +
Sbjct: 148 VRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASM 207
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + + + H + FH ++L+AS D T++I + + L
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTL 267
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
GH F T + S D+ + VW
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 52/216 (24%), Positives = 88/216 (40%)
Query: 44 LEK-FDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
LE+ F H + + F SG D + VW+ K + + GH D + F
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ S S D+T+RIW + V H V F +V+AS D+T++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 163 D------ISGLRKK-N-VAPGMGADDRQIKLWRMNDS--KAWE------VDIFRGHYNNV 206
+ L + N V + D ++ + +D K W+ V + H V
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ V FHP I + + D ++++WD+ L ++
Sbjct: 191 TYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQ 226
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 50/184 (27%), Positives = 86/184 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ +++W N K E +FR H V V F + +V+ ++DK++++W ++
Sbjct: 79 GSRDKTVRIWIPN-VKG-ESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQK 136
Query: 237 CLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
L F Q W +IVS ++DK+++LWD T R C++++ E F V
Sbjct: 137 FL--FSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC-EHGGFVTYV 193
Query: 288 A-HPTLNLFAAGH-DAGMVVFKFERER--PAYTVH----NNVMYYVKERFLHRLDLTNSK 339
HP+ AA D + V+ R Y +H N + ++ +L LT S
Sbjct: 194 DFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYL----LTASS 249
Query: 340 DSVV 343
DS +
Sbjct: 250 DSTL 253
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L ++ SA V LSFHP ++L++ + +++ D LL H+GP + F
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Query: 61 NQQPIFVSGGDDYKIKVW 78
F SGG D ++ VW
Sbjct: 281 RTGEYFASGGSDEQVMVW 298
Score = 38 (18.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 177 GADDRQIKLWRMN 189
G D Q+ +W+ N
Sbjct: 289 GGSDEQVMVWKSN 301
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 239 (89.2 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 46/161 (28%), Positives = 83/161 (51%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F V ++F P + S + +++W + F H VR + F +
Sbjct: 56 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
FV+ DD +KVW ++K +F+L H++++R F + I+SASDD+T+++W+
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR C+ H +V FHP+ + +A +D T++VWD+
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Score = 195 (73.7 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 57/240 (23%), Positives = 108/240 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVW--NYK 81
+ S + + +W + + +F H+ V + F + SG D +++W N K
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCA 141
+F H +R+ F + ++ASDD+T+++W + + L+ H ++V CA
Sbjct: 94 GESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCA 151
Query: 142 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA-----DDRQ----IKLWRMNDS- 191
+F P ++VSAS D+T+++WD S + G D I M+++
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 211
Query: 192 KAWEVDIFR--GHYNNVSCVL----FHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
K W+V R HY S + FHP +++ + D ++++ D+ + L T Q
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQ 271
Score = 171 (65.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 37/162 (22%), Positives = 75/162 (46%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F +A V+ + F +++ + +++W L +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ VS DD +K+W+ R+C+ + H ++ FH I +A D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
++ + H+ V FHP+ + +++AS D T+++ D+
Sbjct: 217 RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 258
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W + K + H N V C F P +IVS ++DK+++LWD + R C
Sbjct: 122 SDDKTVKVWATHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC 179
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++++ E F + V I + D ++++WD+ L ++ L H
Sbjct: 180 VHSYC-EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFH 238
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D+ + + R YT+H +
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Score = 152 (58.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 36/151 (23%), Positives = 63/151 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S+ + ++LWD + + EH G V + FH + G
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + + + H + FH ++++AS D T++I + + L
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
GH F T + S D+ + VW
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 53/216 (24%), Positives = 86/216 (39%)
Query: 44 LEK-FDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
LE+ F H V + F SG D + VW+ K + + GH D + F
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ S S D+T+RIW + V H V F V+AS D+T++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 163 D------ISGLRKK-N-VAPGMGADDRQIKLWRMNDS--KAWE------VDIFRGHYNNV 206
+ L + N V + D ++ + +D K W+ V + H V
Sbjct: 131 ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFV 190
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ V FHP I + D ++++WD+ L ++
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQ 226
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ +++W N K E +FR H V V F + V+ ++DK++++W ++
Sbjct: 79 GSRDKTVRIWVPN-VKG-ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQK 136
Query: 237 CLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
L F Q W +IVS ++DK+++LWD + R C++++ E F V
Sbjct: 137 FL--FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYC-EHGGFVTYV 193
Query: 288 A-HPTLN-LFAAGHDAGMVVFKFERER--PAYTVH----NNVMYYVKERFLHRLDLTNSK 339
HP+ + AAG D + V+ R Y +H N + ++ +L +T S
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYL----ITASS 249
Query: 340 DSVV 343
DS +
Sbjct: 250 DSTL 253
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L ++ SA V GLSFHP +++++ + +++ D LL H+GP + F
Sbjct: 221 LLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Query: 61 NQQPIFVSGGDDYKIKVW 78
F SGG D ++ VW
Sbjct: 281 RTGEYFASGGSDEQVMVW 298
Score = 38 (18.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 177 GADDRQIKLWRMN 189
G D Q+ +W+ N
Sbjct: 289 GGSDEQVMVWKSN 301
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 238 (88.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 54/207 (26%), Positives = 94/207 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS 191
GH V +FHP + ++ S S D+TIR WD+ + + G R W + S
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLS 245
Query: 192 KAWEV-------DIFRGHYNNVSCVLF 211
+V + R H+ SC LF
Sbjct: 246 PPPKVVGCRYGAGVSRSHHR--SCSLF 270
Score = 215 (80.7 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ +W+ + CI +L GH + + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD--RQ 182
+ L GH + FHP + V S S D I++WDI RK V G R
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRC 152
Query: 183 IKL-----WRMNDS-----KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
++ W + + K W++ F GH V+ V FHP ++ S + D++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 227 IRLWDMTK 234
IR WD+ K
Sbjct: 213 IRFWDLEK 220
Score = 205 (77.2 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ LW + H PV + + + + V+G I+VW+ + K + TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + C+ GH+ V C +F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDISGLRKKNVAPG 175
A+ D T+++WD++ + + PG
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPG 187
Score = 151 (58.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F S
Sbjct: 106 ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCI 128
DD+ +K+W+ K + GH + FH +EY + S S D+TIR W+ + +
Sbjct: 166 ADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVV 224
Query: 129 CVLTG 133
+ G
Sbjct: 225 SCIEG 229
Score = 150 (57.9 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K GH N+ + FHP E + S ++D +I+LWD+ ++
Sbjct: 81 GSQSGSIRVWDLEAAKILRT--LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ +R + RF + + S A+D +++LWD+T ++ F V+ H
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 290 PTLNLFAAG 298
P L A+G
Sbjct: 199 PNEYLLASG 207
Score = 137 (53.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/167 (25%), Positives = 71/167 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G DD ++ LW +N + GH + V V + E+IV+ ++ SIR+WD+
Sbjct: 39 GGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 237 CLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
L T + S E + S ++D +I+LWD+ ++ C+ +R + L
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 290 PTLNLFAAGHDAGMVVF------KFERERPAYTVHNNVMYYVKERFL 330
P A+ D V K E P +T NV+ + +L
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Score = 131 (51.2 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 38/139 (27%), Positives = 65/139 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D IKLW + V +RGH V C+ F P + + S A+D +++LWD+T
Sbjct: 123 GSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 237 CLNTFRREQ------ERFWSE-VIVSNAEDKSIRLWDMTKRTCLNTFRREQE--RF---W 284
++ F E +E ++ S + D++IR WD+ K ++ E R+ W
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSW 240
Query: 285 VLVAHPTLNLFAAGHDAGM 303
V+ P + + AG+
Sbjct: 241 VVGLSPPPKVVGCRYGAGV 259
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
++ S V+ L F P W+ S+ + ++LWD ++ +F H GPV + FH +
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIR 97
+ SG D I+ W+ ++ + + + G +R
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVR 235
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 239 (89.2 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 72/259 (27%), Positives = 114/259 (44%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
++S + I++W++R + + H G V G+ H I SG D +K+WN++
Sbjct: 402 LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGL--HFDASILASGSVDKTVKIWNFED- 458
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
K F+L GH D++ + SASDD T+R+W+ ++ CI T H H Q
Sbjct: 459 KSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCI--RTFHGHVGQVQQV 516
Query: 144 HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAW-EVDIFRGH 202
P D D+S P + A + + A+ + F
Sbjct: 517 VPLPREFEFEEHDAECENDDLSTTSGDADPPSIQAS------MGLEPNAAYSQSSAFGTS 570
Query: 203 YNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS---EV--IVSNA 257
++N P+ +V++A D +IRLW+ T CL TF E W+ + IVS A
Sbjct: 571 FDNGRAA--PPR--YMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTLRIVSGA 626
Query: 258 EDKSIRLWDMTKRTCLNTF 276
ED+ I++WD C TF
Sbjct: 627 EDRMIKIWDPRTGKCERTF 645
Score = 228 (85.3 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 71/273 (26%), Positives = 119/273 (43%)
Query: 29 HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFT 88
++ I++WD L HE +R + F + + +SG D IKVWN++ +CI T
Sbjct: 367 YDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTK--LISGSMDRTIKVWNWRTGECIST 424
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDD 148
GH + H + + S S D+T++IWN++ ++ L GH +V + +
Sbjct: 425 YTGHRGGV--IGLHFDASILASGSVDKTVKIWNFEDKSTFS-LRGHTDWVNAVRVDTSSR 481
Query: 149 IVVSASLDQTIRVWDISGLRKKNVAPG-MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVS 207
V SAS D T+R+WD+ G +G + + L R + + + + + S
Sbjct: 482 TVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTS 541
Query: 208 CVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDM 267
P + + E + T + R R+ +V++A D +IRLW+
Sbjct: 542 GDADPPSIQASMG-LEPNAAYSQSSAFGTSFDNGRAAPPRY----MVTSALDSTIRLWET 596
Query: 268 TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHD 300
T CL TF E W L A TL + + D
Sbjct: 597 TTGRCLRTFFGHLEGVWALGAD-TLRIVSGAED 628
Score = 200 (75.5 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 55/188 (29%), Positives = 91/188 (48%)
Query: 71 DDYKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
D +K+ N+K +C I T GH + + F + + S D TI+IW+ ++ +
Sbjct: 327 DRFKVGT-NWKYGRCSIKTFKGHTNGVMCLQFEDNI--LATGSYDTTIKIWDTETGEELR 383
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD------IS----------GLRKKNVA 173
L GH + C QF T ++S S+D+TI+VW+ IS GL
Sbjct: 384 TLRGHESGIRCLQFDDTK--LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASI 441
Query: 174 PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
G+ D+ +K+W D + + RGH + V+ V S + S ++D ++RLWD+
Sbjct: 442 LASGSVDKTVKIWNFEDKSTFSL---RGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLD 498
Query: 234 KRTCLNTF 241
+TC+ TF
Sbjct: 499 TKTCIRTF 506
Score = 176 (67.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 53/196 (27%), Positives = 93/196 (47%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDY 95
W Y ++ + F H V +C + I +G D IK+W+ + + + TL GH
Sbjct: 335 WKYGRCSI-KTFKGHTNGV--MCLQFEDNILATGSYDTTIKIWDTETGEELRTLRGHESG 391
Query: 96 IRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 155
IR F ++S S D+TI++WNW++ CI TGH V+ F + I+ S S+
Sbjct: 392 IRCLQFDDTK--LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDAS--ILASGSV 447
Query: 156 DQTIRVWD---------------ISGLRKKNVAPGM--GADDRQIKLWRMNDSKAWEVDI 198
D+T+++W+ ++ +R + + +DD ++LW + D+K +
Sbjct: 448 DKTVKIWNFEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDL-DTKTC-IRT 505
Query: 199 FRGHYNNVSCVLFHPK 214
F GH V V+ P+
Sbjct: 506 FHGHVGQVQQVVPLPR 521
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 238 (88.8 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 85/342 (24%), Positives = 148/342 (43%)
Query: 57 ICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
+C + I SG D I++WN + + L GH + T + ++S S D+T
Sbjct: 277 MCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGV--TCLQFDQCKLISGSMDKT 334
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK----KNV 172
IRIWN+++ CI +L GH V+C F T ++VS S D T+++W SG ++ +
Sbjct: 335 IRIWNYRTSECISILHGHTDSVLCLTFDST--LLVSGSADCTVKLWHFSGGKRITLRGHT 392
Query: 173 AP----------GM---GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
P G+ G+DD IK+W + + + F H V + +
Sbjct: 393 GPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTC--LHTFSAHIGPVQSLALADSR--LF 448
Query: 220 SNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV-----IVSNAEDKSIRLWDMTKRTCLN 274
S + D +I+ WD+ K+ C++T E W ++S A D +++W+ + C++
Sbjct: 449 SCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEACE--CVH 506
Query: 275 TFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLD 334
T + E VA + + D + ++ F P N + + L+
Sbjct: 507 TLKNHSEPV-TSVALGDCEVVSGSEDGKIYLWLFNNA-P-----NESPVSTQSVPISSLN 559
Query: 335 LTNSKDSVVMQLRGGGRIPAHSISY-NATEHSILVTTRNANN 375
S SV L +P +S S N + ++ + NANN
Sbjct: 560 GQRSNSSVQRALSS---VPNYSSSLSNISTRNLNIPPSNANN 598
Score = 193 (73.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 70/239 (29%), Positives = 104/239 (43%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E S+ V L F + ++S + I++W+YR + + H V +C +
Sbjct: 310 EGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRTSECISILHGHTDSV--LCLTFDSTL 365
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
VSG D +K+W++ K I TL GH + + + +LS SDD TI+IW+ ++
Sbjct: 366 LVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETN 424
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG-------- 177
C+ + H V D + S SLD TI+ WDI +KK V G
Sbjct: 425 TCLHTFSAHIGPVQSLAL--ADSRLFSCSLDGTIKQWDIE--KKKCVHTLFGHIEGVWEI 480
Query: 178 ADDRQIKLWRMNDS--KAWE----VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
A D + +D K WE V + H V+ V EV VS +ED I LW
Sbjct: 481 AADHLRLISGAHDGVVKVWEACECVHTLKNHSEPVTSVALGD-CEV-VSGSEDGKIYLW 537
Score = 186 (70.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 57/224 (25%), Positives = 108/224 (48%)
Query: 121 NWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG---- 175
NW+ C VL+GH+ VMC Q +I+ S S D TIR+W+++ ++ + G
Sbjct: 258 NWRHGRCRQVVLSGHSDGVMCLQL--VRNILASGSYDATIRLWNLATFQQVALLEGHSSG 315
Query: 176 ------------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAE 223
G+ D+ I++W S+ + I GH ++V C+ F S ++VS +
Sbjct: 316 VTCLQFDQCKLISGSMDKTIRIWNYRTSEC--ISILHGHTDSVLCLTFD--STLLVSGSA 371
Query: 224 DKSIRLWDMT--KRTCL--NTFRREQERFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFR 277
D +++LW + KR L +T R + +++S ++D +I++W + TCL+TF
Sbjct: 372 DCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFS 431
Query: 278 REQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNV 321
L + LF+ D + + E+++ +T+ ++
Sbjct: 432 AHIGPVQSLALADS-RLFSCSLDGTIKQWDIEKKKCVHTLFGHI 474
Score = 141 (54.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 44/183 (24%), Positives = 83/183 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
++S + ++LW + + H GPV + + + +SG DD IK+W+ +
Sbjct: 366 LVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETN 424
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVM-CAQ 142
C+ T H+ +++ + S S D TI+ W+ + + C+ L GH V A
Sbjct: 425 TCLHTFSAHIGPVQSLALADSR--LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAA 482
Query: 143 FHPTDDIVVSASLDQTIRVWD----ISGLRKKN-----VAPG-----MGADDRQIKLWRM 188
H ++S + D ++VW+ + L+ + VA G G++D +I LW
Sbjct: 483 DHLR---LISGAHDGVVKVWEACECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLWLF 539
Query: 189 NDS 191
N++
Sbjct: 540 NNA 542
Score = 39 (18.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 770 ADHVILFDVQQKRALAQVKVAKCRHVLYNKGEEIFYAGTG 809
ADH+ L + + +C H L N E + G
Sbjct: 482 ADHLRLISGAHDGVVKVWEACECVHTLKNHSEPVTSVALG 521
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 219 (82.2 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 68/253 (26%), Positives = 107/253 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ L F ++ ++S + I++W+Y + + HE V + F N+ VSG
Sbjct: 426 VRALVFDNQK--LISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSA 481
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D+ ++VW+ R C +TL GH D++ H I SASDD TIR+W+ S CI V
Sbjct: 482 DHTVRVWHVDSRTC-YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVF 540
Query: 132 -----TGHNHYVMCA-QFHPTDDIVV------SASLDQTIRVWDISGLRKKNVAPGMGAD 179
GH V C F ++++ S + + + A MGA
Sbjct: 541 GGMENNGHIGQVQCIIPFTYKEELIEDESESDSENNQNSTTTTTTTSAAATATATAMGAT 600
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEV--IVSNAEDKSIRLWDMTKRTC 237
+ ND+ F NN + P S +++A D +I+LWD+ C
Sbjct: 601 LGTNNISLPNDTATINRSTFTPSNNNTATTATTPNSYPTHFLTSALDNTIKLWDVATGKC 660
Query: 238 LNTFRREQERFWS 250
+ T E WS
Sbjct: 661 IRTQFGHIEGVWS 673
Score = 208 (78.3 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 64/231 (27%), Positives = 105/231 (45%)
Query: 20 KRPWILSSLHNGVIQLW-DYRMNT-LLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKV 77
KRPW S+++ +L ++R T ++ F H V C + ++G D IK+
Sbjct: 352 KRPW--KSVYSERFKLEKNWRKGTHTIKTFTGHSDGVT--CLQFNRKYLMTGSYDTTIKI 407
Query: 78 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHY 137
W +C+ TL GH +R F ++ ++S D TI++WN+ + CI GH
Sbjct: 408 WKIDSGECVKTLTGHTKGVRALVFDNQK--LISGGLDSTIKVWNYHTGQCIATYRGHEDA 465
Query: 138 VMCAQFHPTDDIVVSASLDQTIRVWDISG-----LR---------KKNVAPGM---GADD 180
V+ F T+ +VS S D T+RVW + LR K + A +DD
Sbjct: 466 VVSVDF--TNKSIVSGSADHTVRVWHVDSRTCYTLRGHTDWVNHVKIHSASNTIFSASDD 523
Query: 181 RQIKLWRMNDSKAWEVDIF-----RGHYNNVSCVLFHPKSEVIVSNAEDKS 226
I++W MN ++ + +F GH V C++ E ++ ED+S
Sbjct: 524 TTIRMWDMNSNEC--IKVFGGMENNGHIGQVQCIIPFTYKEELI---EDES 569
Score = 199 (75.1 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 63/219 (28%), Positives = 96/219 (43%)
Query: 39 RMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI-KVWNYKQRKCIFTLLGHLDYIR 97
R L+ D H+ V ++P + +K+ K W K I T GH D +
Sbjct: 329 RKKVKLDTEDNHQKVVPTSVVVRKRPWKSVYSERFKLEKNWR-KGTHTIKTFTGHSDGVT 387
Query: 98 TTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ 157
F+ +Y +++ S D TI+IW S C+ LTGH V F + ++S LD
Sbjct: 388 CLQFNRKY--LMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFD--NQKLISGGLDS 443
Query: 158 TIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS----------KAWEVD-----IFRGH 202
TI+VW+ + +A G +D + + N S + W VD RGH
Sbjct: 444 TIKVWNYH--TGQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWHVDSRTCYTLRGH 501
Query: 203 YNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
+ V+ V H S I S ++D +IR+WDM C+ F
Sbjct: 502 TDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVF 540
Score = 140 (54.3 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 56/209 (26%), Positives = 87/209 (41%)
Query: 92 HLDYIRTTFFHHEYPWILSASDDQTI-RIWNWQSRNCICVLTGHNHYVMCAQFHPT---- 146
H + T+ + PW S+ + + W + + I TGH+ V C QF+
Sbjct: 340 HQKVVPTSVVVRKRPWKSVYSERFKLEKNWR-KGTHTIKTFTGHSDGVTCLQFNRKYLMT 398
Query: 147 ---DDIVVSASLDQTIRVWDISGLRK-------KNVAPGMGADDRQIKLWRMNDSKAWEV 196
D + +D V ++G K N G D IK+W + + +
Sbjct: 399 GSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQKLISGGLDSTIKVWNYHTGQC--I 456
Query: 197 DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW------- 249
+RGH + V V F KS IVS + D ++R+W + RTC T R + W
Sbjct: 457 ATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVWHVDSRTCY-TLRGHTD--WVNHVKIH 511
Query: 250 --SEVIVSNAEDKSIRLWDMTKRTCLNTF 276
S I S ++D +IR+WDM C+ F
Sbjct: 512 SASNTIFSASDDTTIRMWDMNSNECIKVF 540
Score = 82 (33.9 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 254 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERP 313
+++A D +I+LWD+ C+ T E W + A T + + HD + V+ + +
Sbjct: 642 LTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAAD-TFRIISGAHDRLIKVWDLQNGKC 700
Query: 314 AYTVHNN 320
+T NN
Sbjct: 701 LHTFSNN 707
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 236 (88.1 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 215 (80.7 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ +W+ + CI +L GH + + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD--RQ 182
+ L GH + FHP + V S S D I++WDI RK V G R
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRC 152
Query: 183 IKL-----WRMNDS-----KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
++ W + + K W++ F GH V+ V FHP ++ S + D++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 227 IRLWDMTK 234
IR WD+ K
Sbjct: 213 IRFWDLEK 220
Score = 212 (79.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 53/223 (23%), Positives = 99/223 (44%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ LW + H PV + + + + V+G I+VW+ + K + TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + C+ GH+ V C +F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDISGLRKKNVAPGMGADDRQIK------LWRMNDS----KAWEVDIFR-- 200
A+ D T+++WD++ + + PG ++ L S + W+++ F+
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 201 ----GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
G V VLF+P + S +D S+R++ C +
Sbjct: 225 SCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFD 266
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
++ S V+ L F P W+ S+ + ++LWD ++ +F H GPV + FH +
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ SG D I+ W+ ++ + + + G +R+ F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRNCICVL 131
C V+
Sbjct: 261 PERCFDVV 268
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F S
Sbjct: 106 ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCI 128
DD+ +K+W+ K + GH + FH +EY + S S D+TIR W+ + +
Sbjct: 166 ADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVV 224
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ G V F+P D + + ++RV+
Sbjct: 225 SCIEGEPGPVRSVLFNP-DGCCLYSGCQDSLRVY 257
Score = 150 (57.9 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K GH N+ + FHP E + S ++D +I+LWD+ ++
Sbjct: 81 GSQSGSIRVWDLEAAKILRT--LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ +R + RF + + S A+D +++LWD+T ++ F V+ H
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 290 PTLNLFAAG 298
P L A+G
Sbjct: 199 PNEYLLASG 207
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/167 (25%), Positives = 71/167 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G DD ++ LW +N + GH + V V + E+IV+ ++ SIR+WD+
Sbjct: 39 GGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 237 CLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
L T + S E + S ++D +I+LWD+ ++ C+ +R + L
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 290 PTLNLFAAGHDAGMVVF------KFERERPAYTVHNNVMYYVKERFL 330
P A+ D V K E P +T NV+ + +L
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Score = 132 (51.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D IKLW + V +RGH V C+ F P + + S A+D +++LWD+T
Sbjct: 123 GSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 237 CLNTFRREQ------ERFWSE-VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++ F E +E ++ S + D++IR WD+ K ++ E ++ +
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN 240
Query: 290 PTLNLFAAGHDAGMVVFKFERER 312
P +G + V+ +E ER
Sbjct: 241 PDGCCLYSGCQDSLRVYGWEPER 263
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 236 (88.1 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 215 (80.7 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ +W+ + CI +L GH + + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD--RQ 182
+ L GH + FHP + V S S D I++WDI RK V G R
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRC 152
Query: 183 IKL-----WRMNDS-----KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
++ W + + K W++ F GH V+ V FHP ++ S + D++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 227 IRLWDMTK 234
IR WD+ K
Sbjct: 213 IRFWDLEK 220
Score = 212 (79.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 53/223 (23%), Positives = 99/223 (44%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ LW + H PV + + + + V+G I+VW+ + K + TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + C+ GH+ V C +F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDISGLRKKNVAPGMGADDRQIK------LWRMNDS----KAWEVDIFR-- 200
A+ D T+++WD++ + + PG ++ L S + W+++ F+
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 201 ----GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
G V VLF+P + S +D S+R++ C +
Sbjct: 225 SCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFD 266
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
++ S V+ L F P W+ S+ + ++LWD ++ +F H GPV + FH +
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ SG D I+ W+ ++ + + + G +R+ F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRNCICVL 131
C V+
Sbjct: 261 PERCFDVV 268
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F S
Sbjct: 106 ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCI 128
DD+ +K+W+ K + GH + FH +EY + S S D+TIR W+ + +
Sbjct: 166 ADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVV 224
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ G V F+P D + + ++RV+
Sbjct: 225 SCIEGEPGPVRSVLFNP-DGCCLYSGCQDSLRVY 257
Score = 150 (57.9 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K GH N+ + FHP E + S ++D +I+LWD+ ++
Sbjct: 81 GSQSGSIRVWDLEAAKILRT--LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ +R + RF + + S A+D +++LWD+T ++ F V+ H
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 290 PTLNLFAAG 298
P L A+G
Sbjct: 199 PNEYLLASG 207
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/167 (25%), Positives = 71/167 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G DD ++ LW +N + GH + V V + E+IV+ ++ SIR+WD+
Sbjct: 39 GGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 237 CLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
L T + S E + S ++D +I+LWD+ ++ C+ +R + L
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 290 PTLNLFAAGHDAGMVVF------KFERERPAYTVHNNVMYYVKERFL 330
P A+ D V K E P +T NV+ + +L
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Score = 132 (51.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D IKLW + V +RGH V C+ F P + + S A+D +++LWD+T
Sbjct: 123 GSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 237 CLNTFRREQ------ERFWSE-VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++ F E +E ++ S + D++IR WD+ K ++ E ++ +
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN 240
Query: 290 PTLNLFAAGHDAGMVVFKFERER 312
P +G + V+ +E ER
Sbjct: 241 PDGCCLYSGCQDSLRVYGWEPER 263
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 236 (88.1 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 215 (80.7 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ +W+ + CI +L GH + + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD--RQ 182
+ L GH + FHP + V S S D I++WDI RK V G R
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRC 152
Query: 183 IKL-----WRMNDS-----KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
++ W + + K W++ F GH V+ V FHP ++ S + D++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 227 IRLWDMTK 234
IR WD+ K
Sbjct: 213 IRFWDLEK 220
Score = 212 (79.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 53/223 (23%), Positives = 99/223 (44%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ LW + H PV + + + + V+G I+VW+ + K + TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + C+ GH+ V C +F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDISGLRKKNVAPGMGADDRQIK------LWRMNDS----KAWEVDIFR-- 200
A+ D T+++WD++ + + PG ++ L S + W+++ F+
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 201 ----GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
G V VLF+P + S +D S+R++ C +
Sbjct: 225 SCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFD 266
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
++ S V+ L F P W+ S+ + ++LWD ++ +F H GPV + FH +
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ SG D I+ W+ ++ + + + G +R+ F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRNCICVL 131
C V+
Sbjct: 261 PERCFDVV 268
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F S
Sbjct: 106 ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCI 128
DD+ +K+W+ K + GH + FH +EY + S S D+TIR W+ + +
Sbjct: 166 ADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVV 224
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ G V F+P D + + ++RV+
Sbjct: 225 SCIEGEPGPVRSVLFNP-DGCCLYSGCQDSLRVY 257
Score = 150 (57.9 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K GH N+ + FHP E + S ++D +I+LWD+ ++
Sbjct: 81 GSQSGSIRVWDLEAAKILRT--LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ +R + RF + + S A+D +++LWD+T ++ F V+ H
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 290 PTLNLFAAG 298
P L A+G
Sbjct: 199 PNEYLLASG 207
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/167 (25%), Positives = 71/167 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G DD ++ LW +N + GH + V V + E+IV+ ++ SIR+WD+
Sbjct: 39 GGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 237 CLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
L T + S E + S ++D +I+LWD+ ++ C+ +R + L
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 290 PTLNLFAAGHDAGMVVF------KFERERPAYTVHNNVMYYVKERFL 330
P A+ D V K E P +T NV+ + +L
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Score = 132 (51.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D IKLW + V +RGH V C+ F P + + S A+D +++LWD+T
Sbjct: 123 GSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 237 CLNTFRREQ------ERFWSE-VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++ F E +E ++ S + D++IR WD+ K ++ E ++ +
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN 240
Query: 290 PTLNLFAAGHDAGMVVFKFERER 312
P +G + V+ +E ER
Sbjct: 241 PDGCCLYSGCQDSLRVYGWEPER 263
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 236 (88.1 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 215 (80.7 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ +W+ + CI +L GH + + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD--RQ 182
+ L GH + FHP + V S S D I++WDI RK V G R
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRC 152
Query: 183 IKL-----WRMNDS-----KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
++ W + + K W++ F GH V+ V FHP ++ S + D++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 227 IRLWDMTK 234
IR WD+ K
Sbjct: 213 IRFWDLEK 220
Score = 212 (79.7 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 53/223 (23%), Positives = 99/223 (44%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ LW + H PV + + + + V+G I+VW+ + K + TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + C+ GH+ V C +F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDISGLRKKNVAPGMGADDRQIK------LWRMNDS----KAWEVDIFR-- 200
A+ D T+++WD++ + + PG ++ L S + W+++ F+
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 201 ----GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
G V VLF+P + S +D S+R++ C +
Sbjct: 225 SCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFD 266
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
++ S V+ L F P W+ S+ + ++LWD ++ +F H GPV + FH +
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ SG D I+ W+ ++ + + + G +R+ F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRNCICVL 131
C V+
Sbjct: 261 PERCFDVV 268
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F S
Sbjct: 106 ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCI 128
DD+ +K+W+ K + GH + FH +EY + S S D+TIR W+ + +
Sbjct: 166 ADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVV 224
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ G V F+P D + + ++RV+
Sbjct: 225 SCIEGEPGPVRSVLFNP-DGCCLYSGCQDSLRVY 257
Score = 150 (57.9 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K GH N+ + FHP E + S ++D +I+LWD+ ++
Sbjct: 81 GSQSGSIRVWDLEAAKILRT--LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ +R + RF + + S A+D +++LWD+T ++ F V+ H
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 290 PTLNLFAAG 298
P L A+G
Sbjct: 199 PNEYLLASG 207
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/167 (25%), Positives = 71/167 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G DD ++ LW +N + GH + V V + E+IV+ ++ SIR+WD+
Sbjct: 39 GGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 237 CLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
L T + S E + S ++D +I+LWD+ ++ C+ +R + L
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 290 PTLNLFAAGHDAGMVVF------KFERERPAYTVHNNVMYYVKERFL 330
P A+ D V K E P +T NV+ + +L
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Score = 132 (51.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D IKLW + V +RGH V C+ F P + + S A+D +++LWD+T
Sbjct: 123 GSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 237 CLNTFRREQ------ERFWSE-VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++ F E +E ++ S + D++IR WD+ K ++ E ++ +
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN 240
Query: 290 PTLNLFAAGHDAGMVVFKFERER 312
P +G + V+ +E ER
Sbjct: 241 PDGCCLYSGCQDSLRVYGWEPER 263
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 236 (88.1 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 215 (80.7 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ +W+ + CI +L GH + + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD--RQ 182
+ L GH + FHP + V S S D I++WDI RK V G R
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRC 152
Query: 183 IKL-----WRMNDS-----KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
++ W + + K W++ F GH V+ V FHP ++ S + D++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 227 IRLWDMTK 234
IR WD+ K
Sbjct: 213 IRFWDLEK 220
Score = 211 (79.3 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 52/223 (23%), Positives = 99/223 (44%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ LW + H PV + + + + V+G I+VW+ + K + TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + C+ GH+ V C +F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDISGLRKKNVAPGMGADDRQIK------LWRMNDS----KAWEVDIFR-- 200
A+ D T+++WD++ + + PG ++ L S + W+++ F+
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 201 ----GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
G V +LF+P + S +D S+R++ C +
Sbjct: 225 SCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWEPERCFD 266
Score = 168 (64.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/131 (24%), Positives = 64/131 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
++ S V+ L F P W+ S+ + ++LWD ++ +F H GPV + FH +
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ SG D I+ W+ ++ + + + G +R+ F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRNCICVLTGH 134
C V+ H
Sbjct: 261 PERCFDVVLVH 271
Score = 164 (62.8 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F S
Sbjct: 106 ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCI 128
DD+ +K+W+ K + GH + FH +EY + S S D+TIR W+ + +
Sbjct: 166 ADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVV 224
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ G V F+P D + + ++RV+
Sbjct: 225 SCIEGEPGPVRSILFNP-DGCCLYSGCQDSLRVY 257
Score = 150 (57.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K GH N+ + FHP E + S ++D +I+LWD+ ++
Sbjct: 81 GSQSGSIRVWDLEAAKILRT--LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ +R + RF + + S A+D +++LWD+T ++ F V+ H
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 290 PTLNLFAAG 298
P L A+G
Sbjct: 199 PNEYLLASG 207
Score = 137 (53.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/167 (25%), Positives = 71/167 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G DD ++ LW +N + GH + V V + E+IV+ ++ SIR+WD+
Sbjct: 39 GGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 237 CLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
L T + S E + S ++D +I+LWD+ ++ C+ +R + L
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 290 PTLNLFAAGHDAGMVVF------KFERERPAYTVHNNVMYYVKERFL 330
P A+ D V K E P +T NV+ + +L
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Score = 133 (51.9 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D IKLW + V +RGH V C+ F P + + S A+D +++LWD+T
Sbjct: 123 GSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 237 CLNTFRREQ------ERFWSE-VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++ F E +E ++ S + D++IR WD+ K ++ E ++ +
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFN 240
Query: 290 PTLNLFAAGHDAGMVVFKFERER 312
P +G + V+ +E ER
Sbjct: 241 PDGCCLYSGCQDSLRVYGWEPER 263
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 247 (92.0 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 43/150 (28%), Positives = 77/150 (51%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
+ F+ +++ +G ++LWD +L H+ + + FH SG D
Sbjct: 69 IQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSN 128
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
IK+W+ +++ C+F GH +R F + W+ SASDD T+++W+ + I T H
Sbjct: 129 IKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSH 188
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
V QFHP + ++ S S D+T+++WD+
Sbjct: 189 TSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Score = 214 (80.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 73/314 (23%), Positives = 140/314 (44%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GG+D ++ +W + CI +L GH + F+ +++ S ++R+W+ ++
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI--SG--LRKKNVAPGMG--- 177
+ L GH + FHP + + S S+D I++WD+ G R K +
Sbjct: 95 AKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLA 154
Query: 178 -ADDRQIKLWRMNDS--KAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
+ D + +DS K W+ + F H + V+ V FHP ++ S + D++++
Sbjct: 155 FSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVK 214
Query: 229 LWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVA 288
LWD+ K + + E E ++ N + L+ ++ T L + E +R + +V
Sbjct: 215 LWDLEKFNMIGS--SEGETGVVRSVLFNPDGSC--LYSGSENT-LRVYGWEPDRCFDVV- 268
Query: 289 HPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRG 348
H G + + + + +Y+ H NV +YV + L+R+ SV+ L
Sbjct: 269 H-----VGWGKVSDLAISNNQMIAVSYS-HTNVSWYVVD--LNRV---KKSGSVIQGLIQ 317
Query: 349 GGRIPAHSISYNAT 362
IPA S + T
Sbjct: 318 DKPIPAPSSALGTT 331
Score = 174 (66.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ +W + H V I F++ + V+G +++W+ + K + TL+GH
Sbjct: 45 VNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + C+ GH V C F P + S
Sbjct: 105 KASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDI 164
AS D T+++WD+
Sbjct: 165 ASDDSTVKLWDL 176
Score = 174 (66.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F S
Sbjct: 106 ASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCI 128
DD +K+W+ K I H + FH +EY + S S D+T+++W+ + N I
Sbjct: 166 SDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEY-LLASGSADRTVKLWDLEKFNMI 224
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
G V F+P + S S + T+RV+
Sbjct: 225 GSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY 257
Score = 167 (63.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 39/180 (21%), Positives = 88/180 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+++ + V+ L+F P W+ S+ + ++LWD ++ +F H V + FH +
Sbjct: 142 RYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE 201
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ SG D +K+W+ ++ I + G +R+ F+ + + S S++ T+R++ W+
Sbjct: 202 YLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVYGWE 260
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW---DISGLRKK-NVAPGMGAD 179
C V+ H + + +++ +++ S T W D++ ++K +V G+ D
Sbjct: 261 PDRCFDVV--HVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVKKSGSVIQGLIQD 318
Score = 39 (18.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 804 FYAGTGALLCREADHVI-LFDVQQKRAL--AQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
F+ L AD + L+D+++ + ++ + R V+++PD + L S++TL +
Sbjct: 197 FHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRV 256
Score = 38 (18.4 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 507 HQIVEMCYQRTKNFDKL 523
HQ + CY++ KN +
Sbjct: 651 HQKCKACYKQLKNLSNV 667
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 198 (74.8 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 43/150 (28%), Positives = 81/150 (54%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
W+++ H G ++ W MN + + + H+ +RGI F FVSG DD +++W++ +
Sbjct: 202 WMVTGDHGGYVKYWQSNMNNV-KMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMR 260
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDD--QTIRIWNWQSRNCICVLTGHNHYVMC 140
+ L GH ++ +H + I+S S D Q I+IW+ +S + L H VM
Sbjct: 261 CQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMD 320
Query: 141 AQFHPTDDIVVSASLDQTIRVWDISGLRKK 170
+++ + +V+AS D ++++DI LR++
Sbjct: 321 LKWNDNGNWLVTASRDHLLKLFDIRNLREE 350
Score = 160 (61.4 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 39/165 (23%), Positives = 80/165 (48%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICFHNQQ 63
++ ++G+SF P +S +G +++WD+ M E+ H V+ + +H Q+
Sbjct: 225 YQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDF-MRCQEERVLRGHGADVKCVHWHPQK 283
Query: 64 PIFVSGGDDYK--IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ VSG D + IK+W+ K + TL H + ++ W+++AS D +++++
Sbjct: 284 GMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFD 343
Query: 122 WQS-RNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDI 164
++ R + V GH +HP + + S D +I W++
Sbjct: 344 IRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNV 388
Score = 141 (54.7 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 42/159 (26%), Positives = 73/159 (45%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGV--IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV 67
A VK + +HP++ I+S + I++WD + L H+ V + +++ V
Sbjct: 272 ADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLV 331
Query: 68 SGGDDYKIKVWNYKQ-RKCIFTLLGHLDYIRTTFFH--HEYPWILSASDDQTIRIWNWQS 124
+ D+ +K+++ + R+ + GH + +H HE S D +I WN +
Sbjct: 332 TASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHE-GLFCSGGSDGSILFWNVGT 390
Query: 125 RNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
I CV T H+ V +HP I+ S S D TI+ W
Sbjct: 391 DKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 131 (51.2 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 39/167 (23%), Positives = 69/167 (41%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
V+G + +WN L H +RT + H W+++ ++ W + N
Sbjct: 162 VTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQ-SNMN 220
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLW 186
+ + H + F PTD VS S D T+R+WD +++ V G GAD +K
Sbjct: 221 NVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGAD---VKCV 277
Query: 187 RMNDSKAWEVDIFRGHYNNVSCV-LFHPKSEVIVSNAEDKSIRLWDM 232
+ K I G +N + ++ PKS + ++ + D+
Sbjct: 278 HWHPQKGM---IVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDL 321
Score = 89 (36.4 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE-VIVSNAEDKSIRLWDM-TKRT- 236
D +KL+ + + + EV +FRGH S V +HP E + S D SI W++ T +
Sbjct: 336 DHLLKLFDIRNLRE-EVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEI 394
Query: 237 -CLNTFRRE--QERFW---SEVIVSNAEDKSIRLW 265
C+ T W ++ S + D +I+ W
Sbjct: 395 GCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 52 (23.4 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 35/132 (26%), Positives = 55/132 (41%)
Query: 765 LLCREADHVI-LFDVQQKRALAQVKVAKCRHVLYNKGEEIFYAGTGALLCRE-ADHVILF 822
L+ DH++ LFD++ R QV + I + G L C +D ILF
Sbjct: 330 LVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPI-HEG---LFCSGGSDGSILF 385
Query: 823 -DVQQKRALAQVKVAKCRHV---VWSPDMTHLALLSK--HTLHICNRKMEGAGLMKSDV- 875
+V + + V+ A V W P + H+ HT+ R G LM+
Sbjct: 386 WNVGTDKEIGCVETAHDSIVWTLAWHP-LGHILCSGSNDHTIKFWTRNRPG-DLMRDKYN 443
Query: 876 INNIDSSLAATE 887
+N + +SLAA +
Sbjct: 444 LNTLPASLAALD 455
Score = 41 (19.5 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYN 204
G++D IK W N D+ R YN
Sbjct: 420 GSNDHTIKFWTRNRPG----DLMRDKYN 443
Score = 38 (18.4 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 172 VAPGMGADDR 181
+ PGMG +DR
Sbjct: 463 IIPGMGPEDR 472
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 231 (86.4 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 74/288 (25%), Positives = 128/288 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ + +C+ L GH + + I++ S
Sbjct: 226 KGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 283
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ S + L HN V+ +F + ++V+ S D++I VWD++ + +
Sbjct: 284 DSTVRVWDVSSGEVLNTLIHHNEAVLHLRF--CNGLMVTCSKDRSIAVWDMASATDISLR 341
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 342 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 397
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 398 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 457
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKF 308
CL T R + L + ++ HD ++++ F
Sbjct: 458 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDF 504
Score = 207 (77.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + + I+S L + I++WD + L+ H G V +C
Sbjct: 215 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKQSLECLKVLTGHTGSV--LC 270
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 271 LQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNGL--MVTCSKDRSIA 328
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 329 VWDMASATDISLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 386
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 387 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 442
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 443 SGAYDGKIKVWDL 455
Score = 143 (55.4 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI-CFHNQQPIFVS 68
A V + F K +I+S+ + I++W + + H+ RGI C + + VS
Sbjct: 349 AAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHK---RGIACLQYRDRLVVS 403
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ----- 123
G D I++W+ + C+ L GH + +R F ++ I+S + D I++W+ Q
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDP 461
Query: 124 ----SRNCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPG 175
S C+ L H+ V QF D+ ++S+S D TI +WD + + G
Sbjct: 462 RAPASTLCLRTLVEHSGRVFRLQF---DEFQIISSSHDDTILIWDFLNVSSNGQSDG 515
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 230 (86.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 192 KGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 249
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 250 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLR 307
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 308 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 363
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 364 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 423
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 424 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 476
Score = 206 (77.6 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 70/253 (27%), Positives = 112/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + + I+S L + I++WD L+ H G V +C
Sbjct: 181 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LC 236
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 237 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 294
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 295 VWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 352
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 353 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 408
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 409 SGAYDGKIKVWDL 421
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 228 (85.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 69/288 (23%), Positives = 126/288 (43%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L E S ++ ++F P + S ++ I+LWD L + + H V+ + F
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ SG D IK+WN T+ GH D + + F + + Q +WN
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAF---------SPNGQ---LWN 141
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS--GLRK-----KN-VA 173
+ + GH+ +V+ F P ++ S S ++TI++WD + GL+ N V
Sbjct: 142 PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVL 201
Query: 174 PGMGADDRQIKLWRMNDS--KAWEVD------IFRGHYNNVSCVLFHPKSEVIVSNAEDK 225
P + + D ++ ND+ K W+ GH N + + F P +++ S + D
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDA 261
Query: 226 SIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
+I+LWD + +T + + S +++ S + D +I+LWD
Sbjct: 262 TIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 204 (76.9 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 66/269 (24%), Positives = 111/269 (41%)
Query: 44 LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 103
L+ + H + + F + SG +D IK+W+ TL GH +++ F
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 104 EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA--SLDQTIRV 161
+ S S D TI++WN S + + GH+ V F P + A SL TI
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEG 153
Query: 162 ---WDIS-GLRKKNVAPGMGADDRQIKLWRMNDSKAWEVD-IFRGHYNNVSCVLFHPKSE 216
W +S G+ ++ IKLW DS + GH N V ++F P
Sbjct: 154 HSDWVLSVAFSPDGQLLASGSAEKTIKLW---DSATCGLKHTLGGHSNWVLPLVFSPDGR 210
Query: 217 VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTK 269
++ S + D +I+LWD + +T + S +++ S + D +I+LWD
Sbjct: 211 LLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTAT 270
Query: 270 RTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ +T + + +V P L +G
Sbjct: 271 GSFRHTLKGHSDMVLSVVFSPDSQLLESG 299
Score = 178 (67.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 49/173 (28%), Positives = 77/173 (44%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E S V ++F P + S I+LWD L H V + F +
Sbjct: 152 EGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRL 211
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
SG +D IK+W+ TL GH + I + F + S S D TI++W+ +
Sbjct: 212 LASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATG 271
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNV-APGM 176
+ L GH+ V+ F P ++ S S D TI++WD +G+ K ++ PG+
Sbjct: 272 SFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMRTPGI 324
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 194 (73.4 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 56/235 (23%), Positives = 104/235 (44%)
Query: 34 QLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHL 93
+LW F H + + F+ Q + +G D K+W+ + + + TL GH
Sbjct: 160 KLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHF 219
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
I + F+ +++ S D T +W+ S + VL+GH + C QF+ ++ +A
Sbjct: 220 AEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATA 279
Query: 154 SLDQTIRVWDISGLRKKNVAPGMGADDR----------QIKLWRMND--SKAWEVDIFR- 200
SLD++ +VWD G + +A +G +D Q+ D S+ + D F+
Sbjct: 280 SLDKSCKVWDAEG--GQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQC 337
Query: 201 -----GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS 250
GH +S V F+ + +++ + DK+ R+W + CL + +S
Sbjct: 338 LCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFS 392
Score = 191 (72.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 51/242 (21%), Positives = 106/242 (43%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +A + L+F+P+ + + + +LWD + H + +CF+
Sbjct: 173 FRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGD 232
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
V+G D+ +W+ + + L GH I F+ + I +AS D++ ++W+ +
Sbjct: 233 RLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEG 292
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD---------ISGLRKKNVAPG 175
C+ L GHN V+ F+ T ++ +AS D T RV+ + G + +
Sbjct: 293 GQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVC 352
Query: 176 MGADDRQIKLWRMND-SKAWEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
A ++ ++ S+ W V + GH + + F+ + + I++ ++D + R
Sbjct: 353 FNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCR 412
Query: 229 LW 230
+W
Sbjct: 413 IW 414
Score = 187 (70.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 56/241 (23%), Positives = 105/241 (43%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD-DY 73
++F+ ++ ++ ++WD L + H V I F+N V+ G D
Sbjct: 98 VAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDK 157
Query: 74 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
K+W+ + KC +T GH I F+ + + + S D T ++W+ +S + L G
Sbjct: 158 TCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAG 217
Query: 134 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL-W------ 186
H ++ F+ T D +V+ S D T +WD+ RK +V G + ++ W
Sbjct: 218 HFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIA 277
Query: 187 --RMNDS-KAWEVD------IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++ S K W+ + GH + V V F+ ++I + + D + R++ C
Sbjct: 278 TASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQC 337
Query: 238 L 238
L
Sbjct: 338 L 338
Score = 178 (67.7 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 37 DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYI 96
D R L H P+ + F+ F++G D K+W+ + + TL GH + +
Sbjct: 78 DERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVV 137
Query: 97 RTTFFHHEY-PWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 155
F++ Y + + S D+T ++W+ ++ C GH ++C F+P +V + S+
Sbjct: 138 YAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSM 197
Query: 156 DQTIRVWDI-SG 166
D T ++WD+ SG
Sbjct: 198 DTTAKLWDVESG 209
Score = 99 (39.9 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT--- 233
G+ D KLW + + EV GH+ + + F+ + +V+ + D + LWD+
Sbjct: 195 GSMDTTAKLWDVESGE--EVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGR 252
Query: 234 KRTCLNTFRREQE--RF-WSEVIVSNAE-DKSIRLWDMTKRTCLNT 275
K L+ R E +F W +++ A DKS ++WD CL T
Sbjct: 253 KVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLAT 298
Score = 79 (32.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVI 253
GH +S V F+ + +++ + DK+ R+W + CL + +S + I
Sbjct: 343 GHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTI 402
Query: 254 VSNAEDKSIRLW 265
++ ++D + R+W
Sbjct: 403 ITGSKDNTCRIW 414
Score = 53 (23.7 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 21/113 (18%), Positives = 45/113 (39%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ K+W + + GH + V V F+ ++I + + D + R++ CL
Sbjct: 282 DKSCKVWDAEGGQC--LATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLC 339
Query: 240 TFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
+ S+V +++ + DK+ R+W + CL + +
Sbjct: 340 QLEGHKGEI-SKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIF 391
Score = 49 (22.3 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 477 NIDIALEAARVLEDKS--VWERLGH---AALMQGNHQIVEMCYQRT 517
N D +L A L DKS VW+ G A L+ N +++++C+ T
Sbjct: 270 NWDCSLIATASL-DKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYT 314
Score = 41 (19.5 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 750 SSVGCEEIFYAGTGALLCREADHV-----ILFDVQQKRALAQ----------VKVAKCRH 794
S+ G +F T LC+ H + F+ Q R L VK C
Sbjct: 322 SADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQ 381
Query: 795 VLYNKGEEIF 804
VL +EIF
Sbjct: 382 VLEGHSDEIF 391
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 226 KGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 283
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 284 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLR 341
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 342 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 397
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 398 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 457
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 458 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 510
Score = 206 (77.6 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 70/253 (27%), Positives = 112/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + + I+S L + I++WD L+ H G V +C
Sbjct: 215 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LC 270
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 271 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 328
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 329 VWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 386
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 387 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 442
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 443 SGAYDGKIKVWDL 455
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 230 (86.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 241 KGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 298
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 299 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLR 356
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 357 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 412
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 413 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 472
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 473 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 525
Score = 206 (77.6 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 70/253 (27%), Positives = 112/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + + I+S L + I++WD L+ H G V +C
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LC 285
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 286 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 343
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 344 VWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 401
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 402 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 457
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 458 SGAYDGKIKVWDL 470
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 229 (85.7 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 209 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 266
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 267 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLR 324
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 325 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 380
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 381 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 440
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 441 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 493
Score = 208 (78.3 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 253
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 254 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 311
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 312 VWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 369
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 370 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 425
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 426 SGAYDGKIKVWDL 438
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 229 (85.7 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 209 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 266
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 267 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLR 324
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 325 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 380
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 381 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 440
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 441 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 493
Score = 208 (78.3 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 253
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 254 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 311
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 312 VWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 369
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 370 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 425
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 426 SGAYDGKIKVWDL 438
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 229 (85.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 214 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 271
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 272 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASPTDITLR 329
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 330 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 385
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 386 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 445
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 446 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 498
Score = 207 (77.9 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 203 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 258
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 259 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 316
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 317 VWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 374
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 375 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 430
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 431 SGAYDGKIKVWDL 443
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 175 (66.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 35/143 (24%), Positives = 69/143 (48%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
++++ + ++ +++ ++ HE PV + + +GG + +KVW+
Sbjct: 76 LIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGA 135
Query: 84 KCIFTLLGHLDYIRTTFF-HHEYPWIL-SASDDQTIRIWNWQSRNCICVLTGHNHYVMCA 141
+ GH I F H+ W+L S +DD +R+W+ S + V GH+ +
Sbjct: 136 YVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGL 195
Query: 142 QFHPTDDIVVSASLDQTIRVWDI 164
F PT ++S S D+T++VW+I
Sbjct: 196 TFEPTGSFLLSGSRDKTVQVWNI 218
Score = 165 (63.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 59/273 (21%), Positives = 113/273 (41%)
Query: 86 IFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN----CICVLTGHNHYVMC 140
+F +L GH D + T + W+ + + D T+R+WN + CI V TGH V
Sbjct: 356 VFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTA 415
Query: 141 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFR 200
P D L + + D + L++ N+ + D ++ W + +
Sbjct: 416 VALGPLDVNGYPTFLASSSQ--DRT-LKRFNLGSQLNKSD-------FSNRAVWTI---K 462
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW-------SEVI 253
H +V+ + +I S ++DK+I+LWD + + R + W S +
Sbjct: 463 AHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQL 522
Query: 254 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV-AHPTLNLFAAGHDAGMVVFKFERER 312
S + D++IR+W++ + C+ T L+ + +A D + V+
Sbjct: 523 ASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGE 582
Query: 313 PAYTV--HNNVMYYVKERFLHRLDLTNSKDSVV 343
T+ H + ++ + RF L ++ D+VV
Sbjct: 583 CVATLDNHEDRVWALASRFDGSLLVSGGADAVV 615
Score = 164 (62.8 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 45/184 (24%), Positives = 81/184 (44%)
Query: 1 MLTKFETKSAR-VKGLSFH----------PKRPWILSSLHNGVIQLWDYRMNTLLEKFDE 49
+LT +E S R +K + H P + + G++++WD + F
Sbjct: 84 LLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRG 143
Query: 50 HEGPVRGICF--HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW 107
H G + +CF H + SG DD ++++W+ + + GH IR F +
Sbjct: 144 HGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSF 203
Query: 108 ILSASDDQTIRIWNWQSRNCICVL-TGHN-HYVMCAQFHPTDDIVVSASLDQTIRVWDI- 164
+LS S D+T+++WN + R+ + + H+ + P + I+ +A I WD
Sbjct: 204 LLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWK 263
Query: 165 SGLR 168
SG R
Sbjct: 264 SGSR 267
Score = 157 (60.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/143 (25%), Positives = 62/143 (43%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
I S+ + I+LWD ++ H V F+ SG D I++WN +
Sbjct: 480 IASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQ 539
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+C+ TL GH I + + ++SA+ D +++W+ S C+ L H V
Sbjct: 540 QCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALAS 599
Query: 144 HPTDDIVVSASLDQTIRVW-DIS 165
++VS D + VW D++
Sbjct: 600 RFDGSLLVSGGADAVVSVWKDVT 622
Score = 147 (56.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 52/204 (25%), Positives = 84/204 (41%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H+ V I I S D IK+W+ + + L GH + F+ +
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLA 523
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S S D+TIRIWN ++ C+ L GH ++ + VVSA+ D ++VW +S
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSS--G 581
Query: 170 KNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRL 229
+ VA D+ + ++W + + + G + V V E I AE+ R+
Sbjct: 582 ECVAT---LDNHEDRVWALASRFDGSL-LVSGGADAVVSVWKDVTEEYIAKQAEELERRV 637
Query: 230 WDMTKRTCLNTFRREQERFWSEVI 253
L+ F EQ W + I
Sbjct: 638 ---EAEQLLSNF--EQTEDWQQAI 656
Score = 127 (49.8 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GADD +++LW +N S++ V F GH + + + F P ++S + DK++++W++ KR+
Sbjct: 165 GADDSRVRLWDLNSSRSMAV--FEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRS 222
Query: 237 CLNT---FRREQERFW------SEVIVSNAEDKSIRLWD 266
+ T F + W +++ + E I WD
Sbjct: 223 AVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWD 261
Score = 110 (43.8 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 161 VWDIS-GLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
VW S + +A G G DR I++W ++ + V GH + +++ + +V
Sbjct: 510 VWACSFNPFSRQLASGSG--DRTIRIWNVDTQQC--VQTLEGHTGAILKLIYISQGTQVV 565
Query: 220 SNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLW-DMTK 269
S A D +++W ++ C+ T ++R W+ ++VS D + +W D+T+
Sbjct: 566 SAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTE 623
Score = 67 (28.6 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 15/73 (20%), Positives = 33/73 (45%)
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
DY+ + +++A + + I+ S I + H V+ PT+ ++ +
Sbjct: 62 DYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATG 121
Query: 154 SLDQTIRVWDISG 166
+ ++VWDI+G
Sbjct: 122 GAEGLVKVWDIAG 134
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 229 (85.7 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 74/288 (25%), Positives = 128/288 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ + +C+ L GH + + I++ S
Sbjct: 226 KGVYCLQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERV--IVTGSS 283
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ S + L HN V+ +F + ++V+ S D++I VWD++ + +
Sbjct: 284 DSTVRVWDVNSGEVLNTLIHHNEAVLHLRF--CNGLMVTCSKDRSIAVWDMASPTDISLR 341
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 342 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 397
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 398 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 457
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKF 308
CL T R + L + ++ HD ++++ F
Sbjct: 458 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDF 504
Score = 207 (77.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 70/253 (27%), Positives = 114/253 (45%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD + L+ H G V +C
Sbjct: 215 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKQTLECLKILTGHTGSV--LC 270
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 271 LQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNGL--MVTCSKDRSIA 328
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 329 VWDMASPTDISLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 386
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 387 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 442
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 443 SGAYDGKIKVWDL 455
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 229 (85.7 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 228 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 285
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 286 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLR 343
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 344 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 399
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 400 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 459
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 460 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 512
Score = 208 (78.3 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 217 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 272
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 273 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 330
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 331 VWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 388
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 389 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 444
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 445 SGAYDGKIKVWDL 457
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 229 (85.7 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 229 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 286
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 287 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLR 344
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 345 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 400
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 401 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 460
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 461 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 513
Score = 208 (78.3 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 218 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 273
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 274 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 331
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 332 VWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 389
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 390 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 445
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 446 SGAYDGKIKVWDL 458
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 229 (85.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 241 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 298
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 299 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLR 356
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 357 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 412
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 413 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 472
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 473 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 525
Score = 208 (78.3 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 285
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 286 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 343
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 344 VWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 401
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 402 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 457
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 458 SGAYDGKIKVWDL 470
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 229 (85.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 74/294 (25%), Positives = 130/294 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 241 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 298
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ + +
Sbjct: 299 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLR 356
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W + S V GH ++C+ + +
Sbjct: 357 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY--R 412
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM-- 267
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 413 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 472
Query: 268 -------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 473 ALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 525
Score = 208 (78.3 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 285
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + V+G D ++VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 286 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 343
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 344 VWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG 401
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 402 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 457
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 458 SGAYDGKIKVWDL 470
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 231 (86.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 45/160 (28%), Positives = 82/160 (51%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F V ++F P + S + +++W + F H VR + F +
Sbjct: 56 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+ DD +KVW+ +++ +F+L H++++R F + I+SASDD+T+++W+
Sbjct: 116 QSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
SR CI H +V FHP+ + +A +D T++VWD
Sbjct: 176 SRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 201 (75.8 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 56/240 (23%), Positives = 110/240 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVW--NYK 81
+ S + + +W + + +F H+ V + F + SG D +++W N K
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCA 141
+F H +R+ F + +++ASDD+T+++W+ + + LT H ++V CA
Sbjct: 94 GESTVFR--AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCA 151
Query: 142 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA-----DDRQ----IKLWRMNDS- 191
+F P ++VSAS D+T+++WD + + G D I M+++
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 211
Query: 192 KAWEVDIFR--GHYN----NVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 245
K W+ R HY V+ + FHP +++ + D ++++ D+ + L T Q
Sbjct: 212 KVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQ 271
Score = 177 (67.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 38/162 (23%), Positives = 76/162 (46%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F +A V+ + F ++++ + +++W L +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD 156
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ VS DD +K+W+ R+CI + H ++ FH I +A D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDA 216
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
++ + H+ V FHP+ + +++AS D T+++ D+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Score = 156 (60.0 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 40/152 (26%), Positives = 71/152 (46%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W + + + H N V C F P +IVS ++DK+++LWD T R C
Sbjct: 122 SDDKTVKVWSTHRQRF--LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
++++ E F + V I + D ++++WD L ++ L H
Sbjct: 180 IHSYC-EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFH 238
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D+ + + R YT+H +
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Score = 154 (59.3 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 36/151 (23%), Positives = 63/151 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S+ + ++LWD + + EH G V + FH + G
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + + + H + FH ++++AS D T++I + + L
Sbjct: 208 DNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
GH F T + S D+ + VW
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 139 (54.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 50/184 (27%), Positives = 88/184 (47%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ +++W N K E +FR H V V F + +V+ ++DK++++W ++
Sbjct: 79 GSRDKTVRIWVPN-VKG-ESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQR 136
Query: 237 CLNTFRREQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
L F Q W +IVS ++DK+++LWD T R C++++ E F V
Sbjct: 137 FL--FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYC-EHGGFVTYV 193
Query: 288 A-HPTLN-LFAAGHDAGMVVFKFERER--PAYTVH----NNVMYYVKERFLHRLDLTNSK 339
HP+ + AAG D + V+ R Y +H N + ++ +L +T S
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYL----ITASS 249
Query: 340 DSVV 343
DS +
Sbjct: 250 DSTL 253
Score = 138 (53.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 44 LEK-FDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
LE+ F H V + F SG D + +W+ K + + GH D + F
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ S S D+T+RIW + V H V F +V+AS D+T++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 163 D-------ISGLRKKN-VAPGMGADDRQIKLWRMNDS--KAWE------VDIFRGHYNNV 206
S + N V + D ++ + +D K W+ + + H V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFV 190
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ V FHP I + D ++++WD L ++
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQ 226
Score = 122 (48.0 bits), Expect = 0.00049, P = 0.00049
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L ++ SA V LSFHP +++++ + +++ D LL H+GP + F
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Query: 61 NQQPIFVSGGDDYKIKVW 78
F SGG D ++ VW
Sbjct: 281 RTGEYFASGGSDEQVMVW 298
Score = 38 (18.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 177 GADDRQIKLWRMN 189
G D Q+ +W+ N
Sbjct: 289 GGSDEQVMVWKSN 301
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 183 (69.5 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 44/157 (28%), Positives = 77/157 (49%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V +SF+ I S ++G++++WD ++ D+ PV + F +S
Sbjct: 208 VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSN 267
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W++ + K + GH + Y I F WI+S S+D I +WN Q++
Sbjct: 268 LDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEV 327
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ + HP +++ S +L D TIR+W
Sbjct: 328 VQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 181 (68.8 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
L+ + H + + F + D +K+WN C TL GH + +
Sbjct: 71 LISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWS 130
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ I++ASDD+T++I+ + L GH +YV C F+P +VVS S D+++R+W
Sbjct: 131 ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 163 DI-SGLRKKNV 172
D+ +G+ K +
Sbjct: 191 DVRTGMCVKTL 201
Score = 166 (63.5 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 35/163 (21%), Positives = 75/163 (46%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+++ E + + + F P ++ +S + +++W+ + H+ V +
Sbjct: 71 LISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWS 130
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
V+ DD +K++ K TL GH +Y+ F+ + ++S S D+++RIW
Sbjct: 131 ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
+ ++ C+ L H+ V F+ ++ S S D +R+WD
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 162 (62.1 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 32/106 (30%), Positives = 55/106 (51%)
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
F+ Q + VSG D +++W+ + C+ TL H D + F+ + I S S D +R
Sbjct: 171 FNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVR 230
Query: 119 IWNWQSRNCICVLTG-HNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
IW+ + C+ L N V +F P ++S++LD T+++WD
Sbjct: 231 IWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K++ + K + +GH N V C F+P+S ++VS + D+S+R+WD+ C
Sbjct: 140 SDDKTLKIYEVPTVKMAKT--LKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMC 197
Query: 238 LNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNT 275
+ T + + +I S + D +R+WD C+ T
Sbjct: 198 VKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKT 242
Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 41/173 (23%), Positives = 74/173 (42%)
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
K I T+ GH I F ++ ++S D+T++IWN +C LTGH V +
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 144 HPTDDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMNDS-KA 193
+V+AS D+T++++++ ++ G + ++S +
Sbjct: 130 SADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 194 WEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
W+V H + VS V F+ +I S + D +R+WD C+ T
Sbjct: 190 WDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKT 242
Score = 131 (51.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + ++ V + F P +ILSS + ++LWD+ L+++ HE I F N
Sbjct: 242 TLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCI-FANF 300
Query: 63 QPI----FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQT 116
+SG +D KI VWN + ++ + +L GH + + H I S + D T
Sbjct: 301 SVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNT 360
Query: 117 IRIWNWQS 124
IRIW S
Sbjct: 361 IRIWRSDS 368
Score = 91 (37.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 27/132 (20%), Positives = 58/132 (43%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D +++W + + + + V+ V F P + I+S+ D +++LWD K
Sbjct: 223 GSYDGLVRIWDTANGQCVKT-LVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGK 281
Query: 237 CLNTFR-REQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
L ++ E ++ + I+S +ED I +W++ + + + +
Sbjct: 282 TLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIAS 341
Query: 287 VAHPTLNLFAAG 298
HP N+ A+G
Sbjct: 342 DCHPMQNMIASG 353
Score = 68 (29.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA--EDKSIRLW 230
G++D +I +W + + V GH V HP +I S A D +IR+W
Sbjct: 311 GSEDCKIYVWNLQTKEV--VQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 240 (89.5 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 45/153 (29%), Positives = 79/153 (51%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
++ L K I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ CIF H +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
TGH+ V +FHP++ ++ S S D+TIR WD+
Sbjct: 186 TGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
Score = 218 (81.8 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 50/189 (26%), Positives = 87/189 (46%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ VW+ + C+ +L GH I + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIK 184
+ L GH + FHP V S SLD I++WD+ R+K + + ++
Sbjct: 95 AKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV---RRKGCIFKYKSHTQAVR 151
Query: 185 LWRMNDS-------------KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDK 225
R + K W++ F GH V+ V FHP ++ S + D+
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDR 211
Query: 226 SIRLWDMTK 234
+IR WD+ K
Sbjct: 212 TIRFWDLEK 220
Score = 181 (68.8 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ +W + H P+ + ++ + V+G I+VW+ + K + TLLGH
Sbjct: 45 VNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + CI H V C +F P + S
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDIS 165
A+ D T+++WD++
Sbjct: 165 AADDHTVKLWDLT 177
Score = 177 (67.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 41/153 (26%), Positives = 67/153 (43%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + K+ H VR + F S
Sbjct: 106 ANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
DD+ +K+W+ K +F GH + FH + S S D+TIR W+ + + +
Sbjct: 166 ADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVS 225
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ V C F+P D + ++RV+
Sbjct: 226 CIEEEATPVRCILFNP-DGCCLYGGFQDSLRVY 257
Score = 150 (57.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/128 (22%), Positives = 61/128 (47%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K+++ + V+ L F P W+ S+ + ++LWD ++ +F H GPV + FH +
Sbjct: 142 KYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSE 201
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ SG D I+ W+ ++ + + +R F+ + + D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWE 260
Query: 124 SRNCICVL 131
C V+
Sbjct: 261 PERCFDVV 268
Score = 135 (52.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 33/129 (25%), Positives = 62/129 (48%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K + GH N+ + FHP + S + D I+LWD+ ++
Sbjct: 81 GSQSGSIRVWDLEAAKILRTLL--GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ ++ + RF + + S A+D +++LWD+T + F V+ H
Sbjct: 139 CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFH 198
Query: 290 PTLNLFAAG 298
P+ L A+G
Sbjct: 199 PSEYLLASG 207
Score = 38 (18.4 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 873 SDVINNIDSSLAATEVDV 890
SD+ N++D+++A ++ V
Sbjct: 521 SDMKNSVDAAVATNDLSV 538
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 205 (77.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ LW + H PV + + + + V+G I+VW+ + K + TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + C+ GH+ V C +F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDISGLRKKNVAPG 175
A+ D T+++WD++ + + PG
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPG 187
Score = 203 (76.5 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLD 156
GH V +FHP + ++ S S D
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 47/178 (26%), Positives = 80/178 (44%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ +W+ + CI +L GH + + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD--RQ 182
+ L GH + FHP + V S S D I++WDI RK V G R
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRC 152
Query: 183 IKL-----WRMNDS-----KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAED 224
++ W + + K W++ F GH V+ V FHP ++ S + D
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 150 (57.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K GH N+ + FHP E + S ++D +I+LWD+ ++
Sbjct: 81 GSQSGSIRVWDLEAAKILRT--LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ +R + RF + + S A+D +++LWD+T ++ F V+ H
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 290 PTLNLFAAG 298
P L A+G
Sbjct: 199 PNEYLLASG 207
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/167 (25%), Positives = 71/167 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G DD ++ LW +N + GH + V V + E+IV+ ++ SIR+WD+
Sbjct: 39 GGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 237 CLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
L T + S E + S ++D +I+LWD+ ++ C+ +R + L
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 290 PTLNLFAAGHDAGMVVF------KFERERPAYTVHNNVMYYVKERFL 330
P A+ D V K E P +T NV+ + +L
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F S
Sbjct: 106 ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDD 114
DD+ +K+W+ K + GH + FH +EY + S S D
Sbjct: 166 ADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSD 210
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 205 (77.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ LW + H PV + + + + V+G I+VW+ + K + TL+GH
Sbjct: 49 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 108
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + C+ GH+ V C +F P + S
Sbjct: 109 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 168
Query: 153 ASLDQTIRVWDISGLRKKNVAPG 175
A+ D T+++WD++ + + PG
Sbjct: 169 AADDHTVKLWDLTAGKMMSEFPG 191
Score = 194 (73.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ +W+ + CI +L GH + + + I++ S +IR+W+ ++
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 98
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-------------SGLRKKN 171
+ L GH + FHP + V S S D I++WDI +R
Sbjct: 99 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 158
Query: 172 VAP-----GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
+P ADD +KLW + K + F GH V+ V FHP ++
Sbjct: 159 FSPDGKWLASAADDHTVKLWDLTAGKM--MSEFPGHTGPVNVVEFHPNEYLL 208
Score = 191 (72.3 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 35/136 (25%), Positives = 65/136 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 70 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 129
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W+ + +
Sbjct: 130 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 189
Query: 132 TGHNHYVMCAQFHPTD 147
GH V +FHP +
Sbjct: 190 PGHTGPVNVVEFHPNE 205
Score = 140 (54.3 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 32/121 (26%), Positives = 60/121 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K GH N+ + FHP E + S ++D +I+LWD+ ++
Sbjct: 85 GSQSGSIRVWDLEAAKILRT--LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 142
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ +R + RF + + S A+D +++LWD+T ++ F V+ H
Sbjct: 143 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 202
Query: 290 P 290
P
Sbjct: 203 P 203
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 27/97 (27%), Positives = 43/97 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F S
Sbjct: 110 ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA 169
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEY 105
DD+ +K+W+ K + GH + FH +EY
Sbjct: 170 ADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 206
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 226 (84.6 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 48/154 (31%), Positives = 77/154 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++F P W + + I++WD L H VRG+ N+ S GD
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ +Q K I + GHL + H +L+ D R+W+ +++ I L
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFAL 298
Query: 132 TGHNHYVMCAQF-HPTDDIVVSASLDQTIRVWDI 164
+GH++ V C+ F PTD VV+ S D TI+ WD+
Sbjct: 299 SGHDNTV-CSVFTRPTDPQVVTGSHDTTIKFWDL 331
Score = 185 (70.2 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 38/148 (25%), Positives = 71/148 (47%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+V+GL+ + ++ S+ + ++ WD N ++ + H V + H + ++GG
Sbjct: 220 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGG 279
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +VW+ + + IF L GH + + + F P +++ S D TI+ W+ + +
Sbjct: 280 RDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMST 339
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQT 158
LT H V HP ++ SAS D T
Sbjct: 340 LTHHKKSVRAMTLHPKENAFASASADNT 367
Score = 184 (69.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR + F F +G D IK+W+ TL GH++ +R + + ++
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMF 234
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SA DD+ ++ W+ + I GH V C HPT D++++ D RVWDI
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/128 (26%), Positives = 64/128 (50%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRKKNVAP------GMGADDRQ 182
V+ GH +V F P+++ + S D+TI++WD++ G+ K + G+ +R
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 183 IKLWRMNDSK---AWEVD---IFR---GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
++ D K W+++ + R GH + V C+ HP +V+++ D R+WD+
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI- 289
Query: 234 KRTCLNTF 241
RT + F
Sbjct: 290 -RTKMQIF 296
Score = 132 (51.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 62/287 (21%), Positives = 119/287 (41%)
Query: 198 IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSN- 256
+ +GH V V F P +E + + D++I++WD+ T E+ + VSN
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRG-LAVSNR 229
Query: 257 -------AEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLN-LFAAGHDAGMVVFKF 308
+DK ++ WD+ + + ++ + L HPTL+ L G D+ V+
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
Query: 309 ERERPAYTV--HNNVMYYVKERFLHRLDLTNSKDSVVM--QLRGGGRIPAHSISYNATEH 364
+ + + H+N + V R +T S D+ + LR G + +++++
Sbjct: 290 RTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMS--TLTHHKKSV 347
Query: 365 SILVTTRNANNFENSTYD---LYMIPKEESERKEVADGKRSTGISAVWVARNRFAVLDR- 420
+ N F +++ D + +PK E ++ K T I+A+ V + V
Sbjct: 348 RAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQK--TIINAMAVNEDGVMVTGGD 405
Query: 421 NHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRT 467
N +I + W+ G+ Q+S PG+ E ++ D T
Sbjct: 406 NGSIWFWD------WKSGHSFQQSETIVQPGSLESEAGIYAACYDNT 446
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 42/172 (24%), Positives = 70/172 (40%)
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
GHL ++R+ F W + S D+TI+IW+ + LTGH V +
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM 233
Query: 151 VSASLDQTIRVWDISGLRKKNVAPG--MGA------DDRQIKLWRMNDS--KAWEV---- 196
SA D+ ++ WD+ + G G + L DS + W++
Sbjct: 234 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKM 293
Query: 197 DIFR--GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 246
IF GH N V V P +V+ + D +I+ WD+ ++T ++
Sbjct: 294 QIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 226 (84.6 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 56/237 (23%), Positives = 102/237 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ G++F P + SS + ++LW + F H VR + F V+ D
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASD 122
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW +++K +++L H +++R F + I S DD+T+R+W+ S CI +
Sbjct: 123 DKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIF 182
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-------------SGLRKKNVAPG--- 175
T + F+ + + S+ D TI++WDI +G+ + P
Sbjct: 183 TDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNY 242
Query: 176 --MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
G+ D IK+ + + + + GH V V F ++ S D + +W
Sbjct: 243 LISGSSDSTIKILDLLEGRL--IYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 208 (78.3 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 50/242 (20%), Positives = 105/242 (43%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F+P + + + + +W+ +F H + G+ F + S D ++
Sbjct: 26 FNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVR 85
Query: 77 VW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
+W + K +F H +R+ F + +++ASDD+++++W + + + L H
Sbjct: 86 LWTPSIKGESTVFK--AHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRH 143
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM------ 188
++V CA+F P ++ S D+T+R+WD S + N+ G +
Sbjct: 144 TNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIAS 203
Query: 189 ----NDSKAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
N K W++ ++ H V+C FHP ++S + D +I++ D+ + +
Sbjct: 204 SGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLI 263
Query: 239 NT 240
T
Sbjct: 264 YT 265
Score = 169 (64.5 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F+ +A V+ + F ++++ + +++W L + H VR F
Sbjct: 96 TVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPD 155
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCI--FTLLGHLDYIRTTF--FHHEYPWILSASDDQTIR 118
+ S GDD +++W+ +CI FT G TF F+ I S+ D TI+
Sbjct: 156 GRLIASCGDDRTVRLWDTSSHQCINIFTDYGG----SATFVDFNSSGTCIASSGADNTIK 211
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
IW+ ++ I HN V C FHP+ + ++S S D TI++ D+
Sbjct: 212 IWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDL 257
Score = 159 (61.0 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 41/169 (24%), Positives = 81/169 (47%)
Query: 133 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK-------------NVAPG---- 175
GH + CA F+P + + + S D+++ +W+++ + N AP
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLV 75
Query: 176 -MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
+ D+ ++LW S E +F+ H +V V F + +V+ ++DKS+++W + +
Sbjct: 76 ASSSRDQTVRLW--TPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVER 133
Query: 235 RTCLNTFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTF 276
+ L + R RF + +I S +D+++RLWD + C+N F
Sbjct: 134 KKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIF 182
Score = 152 (58.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 50/219 (22%), Positives = 90/219 (41%)
Query: 42 TLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 101
TL F H+ + F+ +G D + +WN + F +GH D I F
Sbjct: 9 TLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNF 68
Query: 102 HHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 161
+ S+S DQT+R+W + V H V F +V+AS D++++V
Sbjct: 69 APSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKV 128
Query: 162 WDISGLRKKNV-----------APGMGADDRQI------KLWRMNDSKAWE-VDIFRGHY 203
W + RKK + D R I + R+ D+ + + ++IF +
Sbjct: 129 WGVE--RKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYG 186
Query: 204 NNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ + V F+ I S+ D +I++WD+ + ++
Sbjct: 187 GSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYK 225
Score = 148 (57.2 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 39/151 (25%), Positives = 69/151 (45%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD+ +K+W + + K + + R H N V C F P +I S +D+++RLWD + C
Sbjct: 121 SDDKSVKVWGV-ERKKFLYSLNR-HTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQC 178
Query: 238 LNTFRREQER-----FWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
+N F F S I S+ D +I++WD+ + ++ HP
Sbjct: 179 INIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHP 238
Query: 291 TLNLFAAGH-DAGMVVFKFERERPAYTVHNN 320
+ N +G D+ + + R YT+H +
Sbjct: 239 SGNYLISGSSDSTIKILDLLEGRLIYTLHGH 269
Score = 37 (18.1 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 177 GADDRQIKLWRMN-DSKAWEVDIFRGHYNNVS 207
G D Q+ +W+ N DS + ++ H V+
Sbjct: 288 GGADSQVLMWKTNFDSLNYR-ELLSKHSKRVT 318
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 227 (85.0 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 303 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 362
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
GG D ++W + + GHL + T FH ++ + S D+T+R+W+ + NC+
Sbjct: 363 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 422
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 167
+ TGH + F P + + + D + +WDI GL
Sbjct: 423 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 462
Score = 190 (71.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 49/201 (24%), Positives = 86/201 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV G F + +S +D +++W+ + C+ GH + T F + +
Sbjct: 302 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 361
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S D+ R+W + + GH V C +FHP + V + S D+T+R+WD+
Sbjct: 362 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 421
Query: 170 KNVAPG-MG-------ADDRQIKLWRMNDSKA--WE------VDIFRGHYNNVSCVLFHP 213
+ G G + + + D + W+ V +GH + V + F
Sbjct: 422 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 481
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
E++ S + D ++RLWD K
Sbjct: 482 DGEILASGSMDNTVRLWDAVK 502
Score = 170 (64.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 50/181 (27%), Positives = 85/181 (46%)
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------ 165
SDD RI + ++ + + +L GH+ V A F P + ++S+S D T+R+W +
Sbjct: 280 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 339
Query: 166 GLRKKNV-------AP-GM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
G + N +P G G DR +LW + + + IF GH +V+C FHP
Sbjct: 340 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP--LRIFAGHLADVNCTRFHP 397
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
S + + + D+++RLWD+ C+ F + S + + A D + LWD
Sbjct: 398 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 457
Query: 267 M 267
+
Sbjct: 458 I 458
Score = 152 (58.6 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 45/178 (25%), Positives = 75/178 (42%)
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
DD ++ + K + L GH + F + ++LS+S+D T+R+W+ Q+ C+
Sbjct: 281 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 340
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
GHN+ V QF P VS D+ R+W + + G AD + ++
Sbjct: 341 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 400
Query: 191 SKA----------WEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
A W+V IF GH + + F P + + A D + LWD+
Sbjct: 401 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 458
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 36/147 (24%), Positives = 61/147 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F P + +S H+ V +LW L F H V FH +G D ++
Sbjct: 353 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 412
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ C+ GH I + F ++ + + D + +W+ + L GH
Sbjct: 413 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 472
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWD 163
V +F +I+ S S+D T+R+WD
Sbjct: 473 TVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 51/186 (27%), Positives = 74/186 (39%)
Query: 128 ICVLTGHNHYVM-CAQFHPTDD--IVVSASLDQTIRVWDISGLRKKNV--APGMGADDRQ 182
IC T N Y TDD ++ D T+RVW ++ + ++V A + D++
Sbjct: 220 ICFYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKE 279
Query: 183 IK--LWRMNDSK-AWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
L R+ D K A E+ I GH V F P ++S++ED ++RLW + TCL
Sbjct: 280 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 339
Query: 240 TFRREQERFWSE-------VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
++ W VS D+ RLW L F HP
Sbjct: 340 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 399
Query: 293 NLFAAG 298
N A G
Sbjct: 400 NYVATG 405
Score = 135 (52.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A V FHP ++ + + ++LWD + F H+GP+ + F +G
Sbjct: 388 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 447
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
D ++ +W+ + L GH D + + F + + S S D T+R+W+
Sbjct: 448 ATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 183 (69.5 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 46/139 (33%), Positives = 65/139 (46%)
Query: 37 DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYI 96
+YR LL H V + F + SGG D +KVW K I+T GHL I
Sbjct: 165 NYRQKFLLRG---HLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGI 221
Query: 97 RTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV-LTGHNHYVMCAQFHPTDDIVVSASL 155
T + + I S SDD+TIR+WN + GH++YV F P +++VS S
Sbjct: 222 STISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSY 281
Query: 156 DQTIRVWDISGLRKKNVAP 174
D+ + +WD+ R P
Sbjct: 282 DEAVFLWDVRSARVMKSLP 300
Score = 151 (58.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 38/155 (24%), Positives = 67/155 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P I S +G +++W L+ F+ H + I + SG D
Sbjct: 179 VSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSD 238
Query: 72 DYKIKVWNYKQRKCIFT-LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D I++WN K T +GH +Y+ F + ++S S D+ + +W+ +S +
Sbjct: 239 DKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKS 298
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
L H+ V ++ S + D +R+WD S
Sbjct: 299 LPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTS 333
Score = 150 (57.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 57/238 (23%), Positives = 99/238 (41%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICF 59
++ FE A + +S+ P I S + I+LW+ F H V I F
Sbjct: 210 LIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAF 269
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ + VSG D + +W+ + + + +L H D + + I S + D +RI
Sbjct: 270 SPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRI 329
Query: 120 WNWQSRNCICVLTGH-NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA 178
W+ + C+ L N V +F P V++ +LD +R+WD
Sbjct: 330 WDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDY-------------V 376
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKR 235
+ R +K ++ + +K + + G Y S P VS +ED +I WD+ TK+
Sbjct: 377 EGRCLKTYQGHSNKKYSLSGAFGVYGQ-SIPGRTPGYAFAVSGSEDGAILCWDVVTKK 433
Score = 149 (57.5 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD+ I+LW + KA F GH+N V + F PK ++VS + D+++ LWD+
Sbjct: 236 GSDDKTIRLWNVLTGKAHPTP-FIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSAR 294
Query: 237 CLNTFRREQERF------WSEVIVSN-AEDKSIRLWDMTKRTCLNTFRRE 279
+ + + W ++++ A D +R+WD + CL T E
Sbjct: 295 VMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHE 344
Score = 93 (37.8 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 31/118 (26%), Positives = 50/118 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D + LW + ++ + H + VS + +I S A D +R+WD +
Sbjct: 279 GSYDEAVFLWDVRSARVMKS--LPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQ 336
Query: 237 CLNTFRREQERFWSEVIVS-NAE-------DKSIRLWDMTKRTCLNTFRREQERFWVL 286
CL T E S V S N + D +RLWD + CL T++ + + L
Sbjct: 337 CLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSL 394
Score = 41 (19.5 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 254 VSNAEDKSIRLWDM-TKR 270
VS +ED +I WD+ TK+
Sbjct: 416 VSGSEDGAILCWDVVTKK 433
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 220 (82.5 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 69/264 (26%), Positives = 120/264 (45%)
Query: 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC----FHNQQPI--FVSGGDDYK 74
R ++ + H + +L+D +N + + H GPV C + +G D+
Sbjct: 57 RLFVCEASH--ICKLYDLEINKTCKTYKGHSGPVT-CCQIESLRKDGKVRHIYTGSWDHT 113
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR--NCICVLT 132
IK WN +C+ TL+GH DY++ E +LS S D ++ +W+ S+ + LT
Sbjct: 114 IKKWNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLYKLT 173
Query: 133 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSK 192
GH+ + C P DI + + +IR W I+ + G ++ +
Sbjct: 174 GHSRGIECITRQPNTDIFWTCGSESSIRCWHITKV---------GGS-------QLEEEG 217
Query: 193 AWEVDIFRGHYNNVSCVLFHPK-SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSE 251
W GH +NV C+LF P+ SE + + + DK++R W + + T R E ++
Sbjct: 218 FW------GHQSNVYCLLFDPQDSEALWTASADKTVREWSLYQGIHEET-RMEHPDVCTD 270
Query: 252 VI------VSNA-EDKSIRLWDMT 268
V+ ++ A D+ IR+WD T
Sbjct: 271 VLTLADGNIATACRDEEIRVWDTT 294
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 221 (82.9 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 64/245 (26%), Positives = 111/245 (45%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F S + L F P I +S + + LW+ +F H PV G+ + +
Sbjct: 14 FTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGN 73
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ S G D +K+W K R + H +R+ F +L+ASDD++ +IW
Sbjct: 74 LVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVAR 133
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGADDRQI 183
R + N++V A+F P +V +AS D+++R++D+ SG + A RQ+
Sbjct: 134 RQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAP-RQL 192
Query: 184 KL--W-RM-------NDSKAWEVD------IFRGHYNNVSCVLFHPKSEVIVSNAEDKSI 227
W M N K ++V ++ H V+ V FHP ++S ++D++I
Sbjct: 193 AWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTI 252
Query: 228 RLWDM 232
R+ D+
Sbjct: 253 RILDL 257
Score = 189 (71.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 57/275 (20%), Positives = 121/275 (44%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F + SA V G+++ PK + S+ H+ +++W+ ++ + +F H VR + F +
Sbjct: 55 RFASHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTG 114
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ ++ DD K+W +R+ + + +++R+ F + +ASDD+++RI++
Sbjct: 115 HLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVD 174
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG--LRKKNVAPGMGADDR 181
S C+ T +HP +++ A I+++D+SG L + V +D
Sbjct: 175 SGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDV 234
Query: 182 QIK-----LWRMNDSKAWEV-DIFRG--------HYNNVSCVLFHPKSEVIVSNAEDKSI 227
L +D + + D+ G H + V+ V F + + D+ +
Sbjct: 235 AFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQL 294
Query: 228 RLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSI 262
+W L+T+ Q S + S+ E +
Sbjct: 295 LVWQSN----LHTYDASQFEAKSALASSSCESSGV 325
Score = 138 (53.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 53/234 (22%), Positives = 106/234 (45%)
Query: 169 KKNVAPGMGADDRQIKLWRMNDSKAWEVD-IFRGHYNNVSCVLFHPKSEVIVSNAEDKSI 227
K N+ G DR +K+W + K V F H V V F ++++ ++DKS
Sbjct: 71 KGNLVASAG-HDRTVKIW---EPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSA 126
Query: 228 RLWDMTKRTCLNTFRREQE-----RFW--SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
++W + +R +++F ++ +F +++ + ++DKS+R++D+ C+ TF E+
Sbjct: 127 KIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEER 186
Query: 281 ERFWVLVAHPTLNLFAAGHDAGMV-VFKFERER--PAYTVH----NNVMYYVKERFLHRL 333
L HP N+ A + +F + Y VH N+V ++ FL
Sbjct: 187 AAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFL--- 243
Query: 334 DLTNSKDSVVMQLRG-GGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMI 386
L+ S D + L GR P ++++ + + + +R+ + F D ++
Sbjct: 244 -LSGSDDRTIRILDLLEGR-PIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLL 295
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 227 (85.0 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 541 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 600
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
GG D ++W + + GHL + T FH ++ + S D+T+R+W+ + NC+
Sbjct: 601 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 660
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 167
+ TGH + F P + + + D + +WDI GL
Sbjct: 661 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 700
Score = 189 (71.6 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 49/201 (24%), Positives = 86/201 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV G F + +S +D +++W+ + C+ GH + T F + +
Sbjct: 540 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 599
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S D+ R+W + + GH V C +FHP + V + S D+T+R+WD+
Sbjct: 600 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 659
Query: 170 KNVAPG-MG-------ADDRQIKLWRMNDSKA--WE------VDIFRGHYNNVSCVLFHP 213
+ G G + + + D + W+ V +GH + V + F
Sbjct: 660 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 719
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
E++ S + D ++RLWD K
Sbjct: 720 DGEILASGSMDNTVRLWDAIK 740
Score = 170 (64.9 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 50/181 (27%), Positives = 85/181 (46%)
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------ 165
SDD RI + ++ + + +L GH+ V A F P + ++S+S D T+R+W +
Sbjct: 518 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 577
Query: 166 GLRKKNV-------AP-GM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
G + N +P G G DR +LW + + + IF GH +V+C FHP
Sbjct: 578 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP--LRIFAGHLADVNCTRFHP 635
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
S + + + D+++RLWD+ C+ F + S + + A D + LWD
Sbjct: 636 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 695
Query: 267 M 267
+
Sbjct: 696 I 696
Score = 152 (58.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 45/178 (25%), Positives = 75/178 (42%)
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
DD ++ + K + L GH + F + ++LS+S+D T+R+W+ Q+ C+
Sbjct: 519 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 578
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
GHN+ V QF P VS D+ R+W + + G AD + ++
Sbjct: 579 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 638
Query: 191 SKA----------WEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
A W+V IF GH + + F P + + A D + LWD+
Sbjct: 639 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 696
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/147 (24%), Positives = 61/147 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F P + +S H+ V +LW L F H V FH +G D ++
Sbjct: 591 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 650
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ C+ GH I + F ++ + + D + +W+ + L GH
Sbjct: 651 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 710
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWD 163
V +F +I+ S S+D T+R+WD
Sbjct: 711 TVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 135 (52.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A V FHP ++ + + ++LWD + F H+GP+ + F +G
Sbjct: 626 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 685
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
D ++ +W+ + L GH D + + F + + S S D T+R+W+
Sbjct: 686 ATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 227 (85.0 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
GG D ++W + + GHL + T FH ++ + S D+T+R+W+ + NC+
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 167
+ TGH + F P + + + D + +WDI GL
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 702
Score = 190 (71.9 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 49/201 (24%), Positives = 86/201 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV G F + +S +D +++W+ + C+ GH + T F + +
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 601
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S D+ R+W + + GH V C +FHP + V + S D+T+R+WD+
Sbjct: 602 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 661
Query: 170 KNVAPG-MG-------ADDRQIKLWRMNDSKA--WE------VDIFRGHYNNVSCVLFHP 213
+ G G + + + D + W+ V +GH + V + F
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
E++ S + D ++RLWD K
Sbjct: 722 DGEILASGSMDNTVRLWDAVK 742
Score = 170 (64.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/181 (27%), Positives = 85/181 (46%)
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------ 165
SDD RI + ++ + + +L GH+ V A F P + ++S+S D T+R+W +
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 579
Query: 166 GLRKKNV-------AP-GM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
G + N +P G G DR +LW + + + IF GH +V+C FHP
Sbjct: 580 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP--LRIFAGHLADVNCTRFHP 637
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
S + + + D+++RLWD+ C+ F + S + + A D + LWD
Sbjct: 638 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 697
Query: 267 M 267
+
Sbjct: 698 I 698
Score = 152 (58.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 45/178 (25%), Positives = 75/178 (42%)
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
DD ++ + K + L GH + F + ++LS+S+D T+R+W+ Q+ C+
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
GHN+ V QF P VS D+ R+W + + G AD + ++
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 191 SKA----------WEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
A W+V IF GH + + F P + + A D + LWD+
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/147 (24%), Positives = 61/147 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F P + +S H+ V +LW L F H V FH +G D ++
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ C+ GH I + F ++ + + D + +W+ + L GH
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWD 163
V +F +I+ S S+D T+R+WD
Sbjct: 713 TVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 135 (52.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A V FHP ++ + + ++LWD + F H+GP+ + F +G
Sbjct: 628 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 687
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
D ++ +W+ + L GH D + + F + + S S D T+R+W+
Sbjct: 688 ATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 227 (85.0 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
GG D ++W + + GHL + T FH ++ + S D+T+R+W+ + NC+
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 167
+ TGH + F P + + + D + +WDI GL
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 702
Score = 189 (71.6 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 49/201 (24%), Positives = 86/201 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV G F + +S +D +++W+ + C+ GH + T F + +
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 601
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S D+ R+W + + GH V C +FHP + V + S D+T+R+WD+
Sbjct: 602 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 661
Query: 170 KNVAPG-MG-------ADDRQIKLWRMNDSKA--WE------VDIFRGHYNNVSCVLFHP 213
+ G G + + + D + W+ V +GH + V + F
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
E++ S + D ++RLWD K
Sbjct: 722 DGEILASGSMDNTVRLWDAIK 742
Score = 170 (64.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/181 (27%), Positives = 85/181 (46%)
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------ 165
SDD RI + ++ + + +L GH+ V A F P + ++S+S D T+R+W +
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 579
Query: 166 GLRKKNV-------AP-GM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
G + N +P G G DR +LW + + + IF GH +V+C FHP
Sbjct: 580 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP--LRIFAGHLADVNCTRFHP 637
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
S + + + D+++RLWD+ C+ F + S + + A D + LWD
Sbjct: 638 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 697
Query: 267 M 267
+
Sbjct: 698 I 698
Score = 152 (58.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 45/178 (25%), Positives = 75/178 (42%)
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
DD ++ + K + L GH + F + ++LS+S+D T+R+W+ Q+ C+
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
GHN+ V QF P VS D+ R+W + + G AD + ++
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 191 SKA----------WEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
A W+V IF GH + + F P + + A D + LWD+
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/147 (24%), Positives = 61/147 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F P + +S H+ V +LW L F H V FH +G D ++
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ C+ GH I + F ++ + + D + +W+ + L GH
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWD 163
V +F +I+ S S+D T+R+WD
Sbjct: 713 TVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 135 (52.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A V FHP ++ + + ++LWD + F H+GP+ + F +G
Sbjct: 628 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 687
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
D ++ +W+ + L GH D + + F + + S S D T+R+W+
Sbjct: 688 ATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 227 (85.0 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 603
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
GG D ++W + + GHL + T FH ++ + S D+T+R+W+ + NC+
Sbjct: 604 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 663
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 167
+ TGH + F P + + + D + +WDI GL
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 703
Score = 190 (71.9 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 49/201 (24%), Positives = 86/201 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV G F + +S +D +++W+ + C+ GH + T F + +
Sbjct: 543 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 602
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S D+ R+W + + GH V C +FHP + V + S D+T+R+WD+
Sbjct: 603 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 662
Query: 170 KNVAPG-MG-------ADDRQIKLWRMNDSKA--WE------VDIFRGHYNNVSCVLFHP 213
+ G G + + + D + W+ V +GH + V + F
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
E++ S + D ++RLWD K
Sbjct: 723 DGEILASGSMDNTVRLWDAVK 743
Score = 170 (64.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/181 (27%), Positives = 85/181 (46%)
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------ 165
SDD RI + ++ + + +L GH+ V A F P + ++S+S D T+R+W +
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 580
Query: 166 GLRKKNV-------AP-GM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
G + N +P G G DR +LW + + + IF GH +V+C FHP
Sbjct: 581 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP--LRIFAGHLADVNCTRFHP 638
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
S + + + D+++RLWD+ C+ F + S + + A D + LWD
Sbjct: 639 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 698
Query: 267 M 267
+
Sbjct: 699 I 699
Score = 152 (58.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 45/178 (25%), Positives = 75/178 (42%)
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
DD ++ + K + L GH + F + ++LS+S+D T+R+W+ Q+ C+
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 581
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
GHN+ V QF P VS D+ R+W + + G AD + ++
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 641
Query: 191 SKA----------WEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
A W+V IF GH + + F P + + A D + LWD+
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/147 (24%), Positives = 61/147 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F P + +S H+ V +LW L F H V FH +G D ++
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 653
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ C+ GH I + F ++ + + D + +W+ + L GH
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWD 163
V +F +I+ S S+D T+R+WD
Sbjct: 714 TVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 135 (52.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A V FHP ++ + + ++LWD + F H+GP+ + F +G
Sbjct: 629 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 688
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
D ++ +W+ + L GH D + + F + + S S D T+R+W+
Sbjct: 689 ATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 213 (80.0 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 40/158 (25%), Positives = 81/158 (51%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
+T+ + +++ P ++ S +G+I ++D LL + H P+R + F +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ + F + +S+S D++I++W+ SR
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSR 264
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
+C+ H V +++PT +VSA D+ I ++D
Sbjct: 265 SCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 174 (66.3 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
++F P +I + H G + ++ D + I + SG D
Sbjct: 112 VAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
I +++ K + TL GH IR+ F + +++ASDD I+I++ Q N L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
+V+ F P D VS+S D++I+VWD S
Sbjct: 232 GSWVLSVAFSPDDTHFVSSSSDKSIKVWDTS 262
Score = 158 (60.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 60/255 (23%), Positives = 109/255 (42%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL-LGHLD 94
W L + H+ V + I S D I++W+ + K I ++ G +D
Sbjct: 49 WSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVD 108
Query: 95 YIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS 154
T F + +I + S + I+ +S L +++ + P + S +
Sbjct: 109 -AWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGA 167
Query: 155 LDQTIRVWDISGLRKKNVAPGMG--------ADDRQIKLWRMNDS--KAWEVD------I 198
+D I ++DI+ + + G + D Q+ + +D K ++V
Sbjct: 168 IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 227
Query: 199 FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------E 251
GH + V V F P VS++ DKSI++WD + R+C+NTF Q++ WS
Sbjct: 228 LSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGS 287
Query: 252 VIVSNAEDKSIRLWD 266
IVS +D++I ++D
Sbjct: 288 KIVSAGDDRAIHIYD 302
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E + ++ L+F P ++++ +G I+++D + L H V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFS 241
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
FVS D IKVW+ R C+ T H D + + ++ I+SA DD+ I I+
Sbjct: 242 PDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Query: 121 N 121
+
Sbjct: 302 D 302
Score = 139 (54.0 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 36/138 (26%), Positives = 68/138 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GA D I ++ + K + GH + + F P S+++V+ ++D I+++D+
Sbjct: 166 GAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 237 CLNTFRREQERFWSEVI-------VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
T S VS++ DKSI++WD + R+C+NTF Q++ W + +
Sbjct: 224 LAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYN 283
Query: 290 PT-LNLFAAGHDAGMVVF 306
PT + +AG D + ++
Sbjct: 284 PTGSKIVSAGDDRAIHIY 301
Score = 127 (49.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 51/224 (22%), Positives = 93/224 (41%)
Query: 26 SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRG--ICFHNQQPIFVSGGDDYKIKVWNYKQR 83
SSL + I+LWD ++ D GPV + F +G K+ ++ +
Sbjct: 82 SSL-DAHIRLWDLETGKQIKSMDA--GPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESG 138
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
K +L +I + + + ++ S + D I I++ + + L GH + F
Sbjct: 139 KKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 144 HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA---------DDRQIKLWRMNDS-KA 193
P ++V+AS D I+++D+ G G+ DD + S K
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKV 258
Query: 194 WE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
W+ V+ F H + V V ++P IVS +D++I ++D
Sbjct: 259 WDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 88 (36.0 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 108 ILSASDDQTIRIWNWQSRNCIC--VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI- 164
I++ S D +++W W L GH V+ I S+SLD IR+WD+
Sbjct: 35 IVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLE 94
Query: 165 SGLRKKNVAPG 175
+G + K++ G
Sbjct: 95 TGKQIKSMDAG 105
Score = 58 (25.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/107 (20%), Positives = 43/107 (40%)
Query: 67 VSGGDDYKIKVWNYKQRKCI--FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
V+G D +KVW + K +TL GH + + S+S D IR+W+ ++
Sbjct: 36 VTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLET 95
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 171
I + F P + + S + ++ + +K++
Sbjct: 96 GKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEH 142
Score = 42 (19.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 148 DIVVSASLDQTIRVW 162
+ +V+ SLD ++VW
Sbjct: 33 ETIVTGSLDDLVKVW 47
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 150 (57.9 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 44/166 (26%), Positives = 76/166 (45%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
+ E S V ++F P ++ S + ++ WD T H V I +
Sbjct: 59 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPD 118
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFH--HEYP---WILSASDDQT 116
SG + +I +W+ K + +L GH +I + H P ++ S+S D +
Sbjct: 119 GKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGS 178
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+R+W+ + C +LTGH V C ++ D ++ SAS D+TI+VW
Sbjct: 179 VRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVW 223
Score = 141 (54.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 67 VSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
VSG DD+ + +W+ + +K + + GH I F + I SAS D++I++W+ ++
Sbjct: 296 VSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTG 355
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
+ L GH V + ++VS S D T++VWD+ + PG AD+
Sbjct: 356 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGH-ADE 409
Score = 134 (52.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 44 LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 103
L + H+ + + F I S D IK+W+ + K + +L GH+ + +
Sbjct: 316 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 375
Query: 104 EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ ++S S D T+++W+ +++ L GH V + P V S D+ +R+W
Sbjct: 376 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 33/119 (27%), Positives = 50/119 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L + A + + F P I S+ + I+LWD R L H V I +
Sbjct: 316 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 375
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ VSG D +KVW+ K +K L GH D + + + + S D+ +RIW
Sbjct: 376 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 122 (48.0 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 143 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG-------ADDRQIKLWRMNDSKAWE 195
F P + + + L +++ LR+ N+ G G +DD + +W + K
Sbjct: 257 FEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKK-P 315
Query: 196 VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRRE----QERFWS- 250
+ GH ++ VLF P S +I S + DKSI+LWD L + R + WS
Sbjct: 316 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 375
Query: 251 --EVIVSNAEDKSIRLWDM 267
++VS + D ++++WD+
Sbjct: 376 DSRLLVSGSSDSTLKVWDV 394
Score = 109 (43.4 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 43/186 (23%), Positives = 74/186 (39%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICFH--NQQP---I 65
V +S+ P + S NG I LWD + + H + G+ + + P
Sbjct: 110 VLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRY 169
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
S D ++VW+ +C L GH + + + + SAS D+TI++W
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGD-GLLYSASQDRTIKVWRAHD- 227
Query: 126 NCIC-VLTGHNHYV--MCAQ---------FHPTDDIVVSASLDQTIRVWDISGLRKKNVA 173
+C L GH H+V M F P + + + L +++ LR+ N+
Sbjct: 228 GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLV 287
Query: 174 PGMGAD 179
G G +
Sbjct: 288 RGQGPE 293
Score = 100 (40.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+C +L GH + + + F ++ S S D T+R W+ + GH H+V+ +
Sbjct: 56 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 115
Query: 144 HPTDDIVVSASLDQTIRVWDIS 165
P + S + I +WD S
Sbjct: 116 SPDGKTLASGCKNGQILLWDPS 137
Score = 99 (39.9 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 108 ILSASDDQTIRIWN-WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
++S SDD T+ +W+ + + + +TGH + F P I+ SAS D++I++WD
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 351
Score = 90 (36.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKRTCL 238
D+ IKLW K + RGH V + + S ++VS + D ++++WD+ ++
Sbjct: 344 DKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAA 401
Query: 239 NTFRREQERF---WS---EVIVSNAEDKSIRLW 265
+ E + WS + + S +DK +R+W
Sbjct: 402 DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 177 GADDRQIKLWRMNDSKAWEVD-IFRGH---YNNVSCVLFH--PKSEVIVSNAEDKSIRLW 230
G + QI LW + K +V + GH +S H P+ + S+++D S+R+W
Sbjct: 125 GCKNGQILLWDPSTGK--QVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVW 182
Query: 231 DMTKRTCLNTFRREQERF----WSE--VIVSNAEDKSIRLW 265
D T C + W ++ S ++D++I++W
Sbjct: 183 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW 223
Score = 55 (24.4 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 24/97 (24%), Positives = 41/97 (42%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCV---------LFHPKSEVIVSNAEDKSIR 228
+ DR IK+WR +D GH+ N + F P I NA+D
Sbjct: 215 SQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASI--NAQDLQGS 272
Query: 229 LWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLW 265
L ++ R L + + + E +VS ++D ++ +W
Sbjct: 273 LQELKDRA-LRRYNLVRGQ-GPERLVSGSDDFTLFMW 307
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 236 (88.1 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 53/160 (33%), Positives = 79/160 (49%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G+SF P R ++LSS +G I+LW + T L + H PV F FVS
Sbjct: 499 SGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVS 558
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
GG D ++W + + GHL + T FH ++ + S D+T+R+W+ + NC+
Sbjct: 559 GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCV 618
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 167
+ TGH + F P + S S D + +WDI GL
Sbjct: 619 RIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGL 658
Score = 189 (71.6 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 48/201 (23%), Positives = 87/201 (43%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV G+ F + +S +D I++W+ + C+ GH + T F + +
Sbjct: 498 HSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFV 557
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S D+ R+W + + GH V C +FHP + V + S D+T+R+WD+
Sbjct: 558 SGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNC 617
Query: 170 KNVAPG-MG-------ADDRQIKLWRMNDSKA--WEVDI------FRGHYNNVSCVLFHP 213
+ G G + + + D + W++ +GH + + F
Sbjct: 618 VRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSR 677
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
E+I S + D ++RLWD+ +
Sbjct: 678 DGEIIASGSIDNTVRLWDVMR 698
Score = 165 (63.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 50/181 (27%), Positives = 84/181 (46%)
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------ 165
SDD RI + ++ + +L GH+ V F P + ++S+S D TIR+W +
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 166 GLRKKNV-------AP-GM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
G + N +P G G DR +LW + + + IF GH +V+C FHP
Sbjct: 536 GYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQP--LRIFAGHLADVTCTRFHP 593
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
S + + + D+++RLWD+ C+ F + S + + S + D + LWD
Sbjct: 594 NSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWD 653
Query: 267 M 267
+
Sbjct: 654 I 654
Score = 161 (61.7 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 38/148 (25%), Positives = 62/148 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F P + +S H+ V +LW L F H V FH +G D ++
Sbjct: 549 FSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVR 608
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ C+ GH I + F ++ S S D + +W+ I L GH
Sbjct: 609 LWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTG 668
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ +F +I+ S S+D T+R+WD+
Sbjct: 669 TIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 148 (57.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 46/178 (25%), Positives = 75/178 (42%)
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
DD ++ + K L GH + F + ++LS+S+D TIR+W+ Q+ C+
Sbjct: 477 DDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVG 536
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGAD--------DRQ 182
GHN+ V QF P VS D+ R+W + + G AD +
Sbjct: 537 YKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 596
Query: 183 IKLWRMNDS--KAWEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
+D + W+V IF GH + + F P + + S + D + LWD+
Sbjct: 597 YVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
Score = 39 (18.8 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 609 SGQYQAALLLGEVGERIKILKSCGQTSLAY 638
SG +LL ++G + I + G T Y
Sbjct: 642 SGSTDGRVLLWDIGHGLMIAELKGHTGTIY 671
Score = 39 (18.8 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 434 LWRMGNDRQESALCGWPGTGYPEVALHFVKD 464
LW +G+ + L G GT Y AL F +D
Sbjct: 651 LWDIGHGLMIAELKGHTGTIY---ALKFSRD 678
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 224 (83.9 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 61/236 (25%), Positives = 102/236 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ L+ P W S + I++W+ L H VRG+ + P S G+
Sbjct: 146 VRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGE 205
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K W+ + K I GHL + T H +++ D R+W+ ++R+ I VL
Sbjct: 206 DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVL 265
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-----GL---RKKNVAPGMGADDRQI 183
+GH V Q D V++ SLD T+R+WD++ G+ KK + + R+
Sbjct: 266 SGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIR-SLATHPREF 324
Query: 184 KLWRMNDS--KAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
+ K W+ + F GH N + L + V+ S ++ S+ WD
Sbjct: 325 TFASASTGSIKQWKCPGGEFMQNFEGH-NAIINTLSVNEDNVLFSGGDNGSMSFWD 379
Score = 182 (69.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 61/258 (23%), Positives = 111/258 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+GL+ P+ P++ S + +++ WD N ++ + H V + H + + V+GG
Sbjct: 188 VRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGR 247
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +VW+ + R I L GH + P +++ S D T+R+W+ + + VL
Sbjct: 248 DGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVL 307
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS 191
T H + HP + SAS +I+ W G G A I +N+
Sbjct: 308 THHKKGIRSLATHPREFTFASASTG-SIKQWKCPGGEFMQNFEGHNAI---INTLSVNED 363
Query: 192 KAWEVDIFRGHYNNVSCVLFHPKS----EVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
+F G +N S + K+ + I + A+ S+ + +TF R R
Sbjct: 364 NV----LFSGG-DNGSMSFWDWKTGYRYQTIDTTAQPGSL---EAEAGIMTSTFDRTGLR 415
Query: 248 FWSEVIVSNAEDKSIRLW 265
+++ DK+I++W
Sbjct: 416 -----LITGEADKTIKVW 428
Score = 173 (66.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 50/204 (24%), Positives = 85/204 (41%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
L+ H G VR + F SG D IK+WN TL GH+ +R
Sbjct: 135 LMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVS 194
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+P++ S +D+ ++ W+ ++ I GH V HP D++V+ D RVW
Sbjct: 195 PRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVW 254
Query: 163 DI---SGLRKKNVAPGMGAD------DRQIKLWRMNDS-KAWEV------DIFRGHYNNV 206
D+ S + + G AD D Q+ ++ + + W++ + H +
Sbjct: 255 DMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGI 314
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLW 230
+ HP+ E ++A SI+ W
Sbjct: 315 RSLATHPR-EFTFASASTGSIKQW 337
Score = 142 (55.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 44/203 (21%), Positives = 88/203 (43%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-------------ISGLRKKNVAPGM 176
V++GH +V P ++ S + D+TI++W+ IS +R V+P
Sbjct: 138 VISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRH 197
Query: 177 G-----ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
+D+ +K W + +K + + GH + V + HP+ +++V+ D R+WD
Sbjct: 198 PYLFSCGEDKMVKCWDLETNKV--IRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWD 255
Query: 232 MTKRTCLN-------TFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
M R+ ++ T Q + +++ + D ++RLWD+ + ++
Sbjct: 256 MRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIR 315
Query: 285 VLVAHPTLNLFAAGHDAGMVVFK 307
L HP FA+ + +K
Sbjct: 316 SLATHPREFTFASASTGSIKQWK 338
Score = 42 (19.8 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 517 TKNFDKLAFLYLITGNLEKLKKMMK 541
T FD+ L LITG +K K+ K
Sbjct: 406 TSTFDRTG-LRLITGEADKTIKVWK 429
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 56/242 (23%), Positives = 109/242 (45%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +A + LSF+P+ + + + +LWD + + H + + F
Sbjct: 173 FRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGD 232
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
++G D+ + VW+ + + TL+GH I + F + IL+ S D+T +W+ S
Sbjct: 233 RIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATS 292
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIK 184
C+ LTGH+ ++ + F T ++ +AS D T RV++ + + G + +I
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS 352
Query: 185 --------LWRMNDSKA--WEVD------IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
L +D A W+V + GH + + F+ K ++++ ++D S R
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCR 412
Query: 229 LW 230
+W
Sbjct: 413 IW 414
Score = 189 (71.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 52/257 (20%), Positives = 106/257 (41%)
Query: 34 QLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHL 93
+LW F H + + F+ Q + +G D K+W+ + + + TL GHL
Sbjct: 160 KLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHL 219
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
I + F I++ S D T+ +W+ + + L GH + A F ++++
Sbjct: 220 AEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTG 279
Query: 154 SLDQTIRVWDISGLRKKNVAPG------------------MGADDRQIKLWRMNDSKAWE 195
S+D+T +WD + + G + D +++ K
Sbjct: 280 SMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKC-- 337
Query: 196 VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS----- 250
+ GH +S + F+P+ +++ + DK+ R+WD+ CL + +S
Sbjct: 338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 251 --EVIVSNAEDKSIRLW 265
++++ ++D S R+W
Sbjct: 398 KGNIVITGSKDNSCRIW 414
Score = 183 (69.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 56/231 (24%), Positives = 99/231 (42%)
Query: 25 LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD-DYKIKVWNYKQR 83
++ ++ ++WD L + H V I F+N ++ G D K+W+ +
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETG 167
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
KC T GH I F+ + + + S D T ++W+ QS + LTGH ++ F
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSF 227
Query: 144 HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGAD--------DRQIKLWRMNDSKA-- 193
+ D +++ S D T+ VWD S RK + G A+ D + L D
Sbjct: 228 DTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCML 287
Query: 194 WE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
W+ V GH + + F ++I + + D + R+++ T R C+
Sbjct: 288 WDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCI 338
Score = 169 (64.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 34/119 (28%), Positives = 61/119 (51%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWI 108
H P+ + + F++G D KVW+ + + TL GH + + F++ Y I
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SG 166
+ S D+T ++W+ ++ C GH ++C F+P +V + S+D T ++WDI SG
Sbjct: 151 ATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG 209
Score = 99 (39.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 33/175 (18%), Positives = 72/175 (41%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D + +W + + +V GH +S LF +I++ + DK+ LWD T
Sbjct: 237 GSFDHTVVVWDASTGR--KVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGK 294
Query: 237 CLNTFRREQER-------FWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ T + + ++I + + D + R+++ T R C+ + + +
Sbjct: 295 CVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFN 354
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTV--HNNVMYYVKERFLHRLDLTNSKDS 341
P N L D ++ + + + H + ++ + + +T SKD+
Sbjct: 355 PQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN 409
Score = 90 (36.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D KLW + + EV GH + + F + I++ + D ++ +WD +
Sbjct: 195 GSMDTTAKLWDIQSGE--EVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGR 252
Query: 237 CLNTF-----RREQERF-WS-EVIVSNAEDKSIRLWDMTKRTCLNT 275
++T F W +I++ + DK+ LWD T C+ T
Sbjct: 253 KVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVAT 298
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 53/242 (21%), Positives = 111/242 (45%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +A + LSF+P+ + + + +LWD + + H + + F+
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGN 232
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
++G D+ + VW + ++TL+GH I + F+ + IL+ S D+T ++W+ +
Sbjct: 233 RIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVN 292
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIK 184
C+ LTGH+ ++ + F T ++ +AS D T R++ + G + +I
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKIS 352
Query: 185 --------LWRMNDSKA--WE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
L +D A W+ + + GH + + F+ K ++I++ ++D + R
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCR 412
Query: 229 LW 230
+W
Sbjct: 413 IW 414
Score = 193 (73.0 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 60/258 (23%), Positives = 110/258 (42%)
Query: 12 VKGLSFH-PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
V ++F+ P I + + +LW F H + + F+ Q + +G
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGS 196
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D K+W+ + + +FTL GH I + F+ I++ S D T+ +W + +
Sbjct: 197 MDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYT 256
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQI------- 183
L GH + A F+ ++++ S+D+T ++WD + K VA G DD +
Sbjct: 257 LIGHCAEISSAVFNWDCSLILTGSMDKTCKLWD--AVNGKCVATLTGHDDEILDSCFDYT 314
Query: 184 -KLW---------RMNDSKAWE-VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
KL R+ + E V GH +S + F+P+ +++ + DK+ R+WD
Sbjct: 315 GKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDA 374
Query: 233 TKRTCLNTFRREQERFWS 250
CL + +S
Sbjct: 375 QTGQCLQVLEGHTDEIFS 392
Score = 167 (63.8 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 37/145 (25%), Positives = 72/145 (49%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
++ L N + Q +++ L + H P+ + + F++G D K+W+
Sbjct: 66 LIQRLQNKLGQHSNHKFY-LFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASG 124
Query: 84 KCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
+ + TL GH + + F++ Y I + S D+T ++W+ ++ C GH ++C
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 143 FHPTDDIVVSASLDQTIRVWDI-SG 166
F+P +V + S+D T ++WDI SG
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQSG 209
Score = 98 (39.6 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 17/72 (23%), Positives = 37/72 (51%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVI 253
GH +S + F+P+ +++ + DK+ R+WD CL + +S ++I
Sbjct: 343 GHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDII 402
Query: 254 VSNAEDKSIRLW 265
++ ++D + R+W
Sbjct: 403 ITGSKDNTCRIW 414
Score = 82 (33.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKR 235
G+ D KLW + + EV GH + + F+ I++ + D ++ +W+ T R
Sbjct: 195 GSMDTTAKLWDIQSGE--EVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGR 252
Query: 236 TCLNTFRREQER----F-WS-EVIVSNAEDKSIRLWDMTKRTCLNT 275
E F W +I++ + DK+ +LWD C+ T
Sbjct: 253 KVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVAT 298
Score = 76 (31.8 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 23/105 (21%), Positives = 45/105 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ KLW + K V GH + + F ++I + + D + R++ R
Sbjct: 279 GSMDKTCKLWDAVNGKC--VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRE 336
Query: 237 CLNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCL 273
C+ + S++ +++ + DK+ R+WD CL
Sbjct: 337 CVTKLEGHEGEI-SKISFNPQGNRLLTGSSDKTARIWDAQTGQCL 380
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 220 (82.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 54/254 (21%), Positives = 118/254 (46%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + L P + ++ + + LW+++ + ++ H+ V + F
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ S D +++W +R H +R+ F + ++ +AS+D++I++W+
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMG----AD 179
+ + L H H+V CA+F P ++VS S D+TI++WD + + N + +G D
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 180 DRQ----IKLWRMNDS-KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
I + + K W+V + ++ H V+C+ FHP +V+ + D +++
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLK 253
Query: 229 LWDMTKRTCLNTFR 242
+ D+ + + T +
Sbjct: 254 ILDLLEGRLIYTLQ 267
Score = 208 (78.3 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 54/237 (22%), Positives = 102/237 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P + S+ + ++LW +F H PVR + F + +
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IKVW+ +++ +++L H ++R F + I+S S+D+TI+IW+ ++ C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-------------SGLRKKNVAPG--- 175
+ + F+P+ + SA DQT++VWD+ G+ + P
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNY 242
Query: 176 --MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+ D +K+ + + + + +GH V V F E+ S D + LW
Sbjct: 243 LVTASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 178 (67.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 41/163 (25%), Positives = 80/163 (49%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHN 61
++F+ +A V+ + F ++ ++ + I++W YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ VS +D IK+W+ ++C+ + + F+ I SA DQT+++W+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + H+ V C FHP+D+ +V+AS D T+++ D+
Sbjct: 215 VRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDL 257
Score = 152 (58.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 41/152 (26%), Positives = 73/152 (48%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ IK+W M + + ++R H + V C F P +IVS +EDK+I++WD T + C
Sbjct: 121 SEDKSIKVWSMYRQR-FLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
+N F + F + V I S D+++++WD+ L ++ + H
Sbjct: 179 VNNFS-DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFH 237
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D + + R YT+ +
Sbjct: 238 PSDNYLVTASSDGTLKILDLLEGRLIYTLQGH 269
Score = 140 (54.3 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 39/168 (23%), Positives = 67/168 (39%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S + I++WD + F + G + F+ S G
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGS 206
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + K + H + FH ++++AS D T++I + I L
Sbjct: 207 DQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTL 266
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-------GLRKKNV 172
GH V F ++ S D + +W + GL K+N+
Sbjct: 267 QGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLNKRNL 314
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
DR ++LW + D + + F+ H V V F + + + +EDKSI++W M ++ L
Sbjct: 81 DRTVRLW-IPDKRG-KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLY 138
Query: 240 TFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTF 276
+ R +F + +IVS +EDK+I++WD T + C+N F
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Score = 40 (19.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 177 GADDRQIKLWRMN 189
G D Q+ LWR N
Sbjct: 288 GGADTQVLLWRTN 300
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 220 (82.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 58/286 (20%), Positives = 127/286 (44%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + F P I ++ + + LW + + ++ H+ V + F Q
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ S D +++W ++ H +R+ F + +++AS+D++I++W+
Sbjct: 74 LLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFR 133
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMG------ 177
+ + L H H+V CA+F P ++VS S D+TI++WD + + N + +G
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 178 -----------ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
D +K+W + +K + ++ H V+C+ FHP +V+ + D +
Sbjct: 194 FNPNGTCIASAGSDHAVKIWDIRMNKL--LQHYQVHSCGVNCLSFHPLGNSLVTASSDGT 251
Query: 227 IRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLW 265
+++ D+ + + T + ++ E++ S D + +W
Sbjct: 252 VKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 154 (59.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/162 (22%), Positives = 73/162 (45%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
++F+ +A V+ + F ++++ + I++W L H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPD 155
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ VS +D IK+W+ ++C+ + + F+ I SA D ++IW+
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDI 215
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + H+ V C FHP + +V+AS D T+++ D+
Sbjct: 216 RMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDL 257
Score = 148 (57.2 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 51/178 (28%), Positives = 85/178 (47%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
DR ++LW + D K + F+ H V V F +++V+ +EDKSI++W M ++ L
Sbjct: 81 DRTVRLWVL-DRKGKSSE-FKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLY 138
Query: 240 TFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVA-HPT 291
+ R +F + +IVS +EDK+I++WD T + C+N F + F V +P
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS-DSVGFANFVDFNPN 197
Query: 292 LNLFA-AGHDAGMVVFKFERER--PAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQL 346
A AG D + ++ + Y VH+ + + L +T S D V L
Sbjct: 198 GTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKML 255
Score = 132 (51.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 49/218 (22%), Positives = 92/218 (42%)
Query: 43 LLEK-FDEHEGPVRGICFH-NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 100
+LE+ F H+ + F N + I + D + + +W+ K + +GH D + +
Sbjct: 9 ILERSFKGHKAAITSADFSPNCKQIATASWDTF-LMLWSLKPHARAYRYVGHKDVVTSLQ 67
Query: 101 FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 160
F + + SAS D+T+R+W + H V F ++V+AS D++I+
Sbjct: 68 FSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIK 127
Query: 161 VWDI-------SGLRKKN-VAPGMGADDRQIKLWRMNDS--KAWE------VDIFRGHYN 204
VW + S R + V + D ++ + D K W+ V+ F
Sbjct: 128 VWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 205 NVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ V F+P I S D ++++WD+ L ++
Sbjct: 188 FANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQ 225
Score = 53 (23.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 30/149 (20%), Positives = 58/149 (38%)
Query: 253 IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLN-LFAAGHDAGMVVFKFERE 311
I S D ++++WD+ L ++ L HP N L A D + +
Sbjct: 201 IASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG 260
Query: 312 RPAYTV--HNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGG-----RIPAHSIS---YNA 361
R YT+ H ++ V L + D+ V+ R + P ++ + A
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRLHFEA 320
Query: 362 TEHSILVTTRNANNFENSTYDLYMIPKEE 390
+ H + + R+ ++ E+ + + PK E
Sbjct: 321 SPHLLDIYPRSPHSHEDRKETIEINPKRE 349
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 177 GADDRQIKLWRMN 189
G D Q+ +WR N
Sbjct: 288 GGADAQVLIWRTN 300
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 224 (83.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 57/219 (26%), Positives = 103/219 (47%)
Query: 58 CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 117
C + ++G DD I+V++ +K + L GH + + H ++S S D+T+
Sbjct: 387 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTV 445
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDI--VVSASLDQTIRVWDISGLRKKNVAPG 175
R+W+ + C V GHN V C +I +V+ S D T+ VW L K++ P
Sbjct: 446 RVWDIKKGCCTHVFKGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK---LPKESSVPD 502
Query: 176 MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
G + ++ + + V + RGH +V V H ++VS + D ++ +WD+ +
Sbjct: 503 HGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGH--GNIVVSGSYDNTLIVWDVAQM 560
Query: 236 TCLNTFRREQERFWSEVI-------VSNAEDKSIRLWDM 267
CL +R +S + +S + D +IR+WD+
Sbjct: 561 KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 599
Score = 161 (61.7 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H VR + H I VSG D + VW+ Q KC++ L GH D I +T + HE +
Sbjct: 529 HMASVRTVSGHGN--IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI 586
Query: 110 SASDDQTIRIWN----WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
SAS D TIRIW+ W + C N CA+ + +L + +
Sbjct: 587 SASMDTTIRIWDLENIWNNGECSYAT---NSASPCAKI-----LGAMYTLQGHTALVGLL 638
Query: 166 GLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVL-FHPKSEVIVSNAED 224
L K + A D I+ W ND F H+ N+S + F+ ++VS +E+
Sbjct: 639 RLSDKFLVSA--AADGSIRGWDANDYSRK----FSYHHTNLSAITTFYVSDNILVSGSEN 692
Query: 225 KSIRLWDMTKRTCLNT-FRREQERFWS 250
+ ++++ ++ ++ ++ WS
Sbjct: 693 Q-FNIYNLRSGKLVHANILKDADQIWS 718
Score = 134 (52.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 53/231 (22%), Positives = 99/231 (42%)
Query: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTD 147
TL GH+ + T E ++++ +DD+ IR+++ ++ + L+GH+ V ++
Sbjct: 376 TLRGHMTSV-ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKY-AHG 433
Query: 148 DIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVS 207
I+VS S D+T+RVWDI +V G + R + + + K I G +N
Sbjct: 434 GILVSGSTDRTVRVWDIKKGCCTHVFKGHNSTVRCLDIVEYKNIKY----IVTGSRDNTL 489
Query: 208 CVLFHPKSEVIVSNAEDKSIRLWDMTKRT---CLNTFRREQE--RFWS---EVIVSNAED 259
V PK + + E+ L T + R R S ++VS + D
Sbjct: 490 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD 549
Query: 260 KSIRLWDMTKRTCLNTFRREQERFW-VLVAHPTLNLFAAGHDAGMVVFKFE 309
++ +WD+ + CL +R + + H +A D + ++ E
Sbjct: 550 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 600
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 224 (83.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 49/160 (30%), Positives = 78/160 (48%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 603
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
GG D ++W + + GHL + T +H ++ + S D+T+R+W+ + NC+
Sbjct: 604 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCV 663
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 167
+ TGH + F P + + + D + +WDI GL
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 703
Score = 187 (70.9 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 48/201 (23%), Positives = 86/201 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV G F + +S +D +++W+ + C+ GH + T F + +
Sbjct: 543 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 602
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S D+ R+W + + GH V C ++HP + V + S D+T+R+WD+
Sbjct: 603 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNC 662
Query: 170 KNVAPG-MG-------ADDRQIKLWRMNDSKA--WE------VDIFRGHYNNVSCVLFHP 213
+ G G + + + D + W+ V +GH + V + F
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
E++ S + D ++RLWD K
Sbjct: 723 DGEILASGSMDNTVRLWDAVK 743
Score = 167 (63.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 49/181 (27%), Positives = 85/181 (46%)
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------ 165
SDD RI + ++ + + +L GH+ V A F P + ++S+S D T+R+W +
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 580
Query: 166 GLRKKNV-------AP-GM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
G + N +P G G DR +LW + + + IF GH +V+C +HP
Sbjct: 581 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP--LRIFAGHLADVNCTRYHP 638
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
S + + + D+++RLWD+ C+ F + S + + A D + LWD
Sbjct: 639 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 698
Query: 267 M 267
+
Sbjct: 699 I 699
Score = 153 (58.9 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 45/179 (25%), Positives = 76/179 (42%)
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
DD ++ + K + L GH + F + ++LS+S+D T+R+W+ Q+ C+
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 581
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
GHN+ V QF P VS D+ R+W + + G AD + + N
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTR-YHPNS 640
Query: 191 S-----------KAWEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
+ + W+V IF GH + + F P + + A D + LWD+
Sbjct: 641 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 143 (55.4 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 35/147 (23%), Positives = 61/147 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F P + +S H+ V +LW L F H V +H +G D ++
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVR 653
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ C+ GH I + F ++ + + D + +W+ + L GH
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWD 163
V +F +I+ S S+D T+R+WD
Sbjct: 714 TVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 26/112 (23%), Positives = 50/112 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A V +HP ++ + + ++LWD + F H+GP+ + F +G
Sbjct: 629 ADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 688
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
D ++ +W+ + L GH D + + F + + S S D T+R+W+
Sbjct: 689 ATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 221 (82.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 57/216 (26%), Positives = 92/216 (42%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
W+LS NG ++ W N + H VR I F F++ GDD IK+WN+
Sbjct: 191 WLLSGDQNGTVKYWQPNFNNV-NNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNN 249
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
K TL GH +++ +H I+S S D +++W+ +S NC+ L G H V +
Sbjct: 250 GKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTR 309
Query: 143 FHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFR 200
F P T ++ S S D++ R++D+ ++ V D W + +
Sbjct: 310 FQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRD-SETDLSCVAWHPIHASMVTTAAYN 368
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G +N + P S V + + L T T
Sbjct: 369 GSISNFLLDSYIPDSNESVPKRSNNNSNLSTNTNNT 404
Score = 167 (63.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/169 (26%), Positives = 78/169 (46%)
Query: 3 TKF-ETKSARVKG----LSFHPKRPWILSSLHNGVIQLWD---YRMNTLLEKFDEHEGPV 54
TKF S +VK + + P+ +L + H+G LW+ + T+++ HE P+
Sbjct: 124 TKFVHLSSNKVKHTINTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQA---HESPI 180
Query: 55 RGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD 114
+ + N +SG + +K W + + H + +R F L+ DD
Sbjct: 181 LTMKYSNHDEWLLSGDQNGTVKYWQPNFNN-VNNISAHANGVRDIAFSPNDSKFLTCGDD 239
Query: 115 QTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
I+IWN+ + L+GH+ V A +HP ++VS S D +++WD
Sbjct: 240 SAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWD 288
Score = 150 (57.9 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 49/209 (23%), Positives = 91/209 (43%)
Query: 108 ILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW----- 162
+L AS +WN + N ++ H ++ ++ D+ ++S + T++ W
Sbjct: 150 LLVASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFN 209
Query: 163 ---DIS----GLRKKNVAPGMG-----ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVL 210
+IS G+R +P DD IK+W N+ K E GH+ V
Sbjct: 210 NVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGK--EERTLSGHHWEVKSAD 267
Query: 211 FHPKSEVIVSNAEDKSIRLWDMTKRTCLNT---FRR--EQERFW----SEVIVSNAEDKS 261
+HP +IVS ++D ++LWD C++T F+ + RF + ++ S + D+S
Sbjct: 268 WHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRS 327
Query: 262 IRLWDMTKRTCLNTFRREQERFWVLVAHP 290
R++D+ + R + + HP
Sbjct: 328 CRIFDLRTMKDMLVIRDSETDLSCVAWHP 356
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 47/228 (20%), Positives = 96/228 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++F P L+ + I++W++ H V+ +H + VSG
Sbjct: 221 VRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSK 280
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRIWNWQSRNCIC 129
D +K+W+ + C+ TL G + T F + S S D++ RI++ ++ +
Sbjct: 281 DNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDML 340
Query: 130 VLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDI-SGLRKKNVA-PGMGADDRQIKLW 186
V+ + C +HP +V +A+ + +I + + S + N + P ++ +
Sbjct: 341 VIRDSETDLSCVAWHPIHASMVTTAAYNGSISNFLLDSYIPDSNESVPKRSNNNSNLSTN 400
Query: 187 RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
N A + I H + V +HP ++ + DK+ R W +
Sbjct: 401 TNNTIDAVQ-KIPYAHEKAIHAVEYHPLGHLLCTAGSDKTARFWSRAR 447
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 221 (82.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 57/216 (26%), Positives = 92/216 (42%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
W+LS NG ++ W N + H VR I F F++ GDD IK+WN+
Sbjct: 191 WLLSGDQNGTVKYWQPNFNNV-NNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNN 249
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
K TL GH +++ +H I+S S D +++W+ +S NC+ L G H V +
Sbjct: 250 GKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTR 309
Query: 143 FHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFR 200
F P T ++ S S D++ R++D+ ++ V D W + +
Sbjct: 310 FQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRD-SETDLSCVAWHPIHASMVTTAAYN 368
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G +N + P S V + + L T T
Sbjct: 369 GSISNFLLDSYIPDSNESVPKRSNNNSNLSTNTNNT 404
Score = 167 (63.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/169 (26%), Positives = 78/169 (46%)
Query: 3 TKF-ETKSARVKG----LSFHPKRPWILSSLHNGVIQLWD---YRMNTLLEKFDEHEGPV 54
TKF S +VK + + P+ +L + H+G LW+ + T+++ HE P+
Sbjct: 124 TKFVHLSSNKVKHTINTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQA---HESPI 180
Query: 55 RGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD 114
+ + N +SG + +K W + + H + +R F L+ DD
Sbjct: 181 LTMKYSNHDEWLLSGDQNGTVKYWQPNFNN-VNNISAHANGVRDIAFSPNDSKFLTCGDD 239
Query: 115 QTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
I+IWN+ + L+GH+ V A +HP ++VS S D +++WD
Sbjct: 240 SAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWD 288
Score = 150 (57.9 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 49/209 (23%), Positives = 91/209 (43%)
Query: 108 ILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW----- 162
+L AS +WN + N ++ H ++ ++ D+ ++S + T++ W
Sbjct: 150 LLVASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFN 209
Query: 163 ---DIS----GLRKKNVAPGMG-----ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVL 210
+IS G+R +P DD IK+W N+ K E GH+ V
Sbjct: 210 NVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGK--EERTLSGHHWEVKSAD 267
Query: 211 FHPKSEVIVSNAEDKSIRLWDMTKRTCLNT---FRR--EQERFW----SEVIVSNAEDKS 261
+HP +IVS ++D ++LWD C++T F+ + RF + ++ S + D+S
Sbjct: 268 WHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRS 327
Query: 262 IRLWDMTKRTCLNTFRREQERFWVLVAHP 290
R++D+ + R + + HP
Sbjct: 328 CRIFDLRTMKDMLVIRDSETDLSCVAWHP 356
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 47/228 (20%), Positives = 96/228 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++F P L+ + I++W++ H V+ +H + VSG
Sbjct: 221 VRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSK 280
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRIWNWQSRNCIC 129
D +K+W+ + C+ TL G + T F + S S D++ RI++ ++ +
Sbjct: 281 DNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDML 340
Query: 130 VLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDI-SGLRKKNVA-PGMGADDRQIKLW 186
V+ + C +HP +V +A+ + +I + + S + N + P ++ +
Sbjct: 341 VIRDSETDLSCVAWHPIHASMVTTAAYNGSISNFLLDSYIPDSNESVPKRSNNNSNLSTN 400
Query: 187 RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
N A + I H + V +HP ++ + DK+ R W +
Sbjct: 401 TNNTIDAVQ-KIPYAHEKAIHAVEYHPLGHLLCTAGSDKTARFWSRAR 447
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 212 (79.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 46/156 (29%), Positives = 80/156 (51%)
Query: 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV 67
+ ++++GLSF P + S + +I++WD+ T + H V+ + +H Q+ + V
Sbjct: 208 EQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIV 267
Query: 68 SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
SGG D IK+W+ K + I TL GH + ++ WI+SAS DQ +++++ ++
Sbjct: 268 SGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKE 327
Query: 128 ICVLTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVW 162
+ GH V HP +D+ VS D I W
Sbjct: 328 MQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYW 363
Score = 192 (72.6 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 48/178 (26%), Positives = 86/178 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHN 61
T + + V+ + + W++S +G I+ W MN + + F HE +RG+ F
Sbjct: 161 TILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNV-KIFKAHEQSKIRGLSFSP 219
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
S DD IK+W++ + L+GH ++ +H + I+S D I+IW+
Sbjct: 220 TDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWD 279
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGAD 179
+S I L GH V +++ + +VSAS DQ ++V+DI +++ G G +
Sbjct: 280 AKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKE 337
Score = 162 (62.1 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 52/222 (23%), Positives = 89/222 (40%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWD---YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+S+ P+ +++ +G LW+ + T+L+ H+ VR I + + + VSG D
Sbjct: 131 VSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQA---HDSAVRSIIWSHNEDWMVSGDD 187
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
IK W IR F + S +DD+ I+IW++ L
Sbjct: 188 SGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQL 247
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS 191
GH V C +HP ++VS D I++WD + G + +++ W N +
Sbjct: 248 VGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVE-WNQNGN 306
Query: 192 -----------KAW------EVDIFRGHYNNVSCVLFHPKSE 216
K + E+ F+GH V+ + HP E
Sbjct: 307 WIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHE 348
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/137 (27%), Positives = 69/137 (50%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
ADD+ IK+W ++ E + GH +V CV +HP+ +IVS +D +I++WD
Sbjct: 228 ADDKIIKIWDF--ARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQN 285
Query: 238 LNTFRREQERF----WSEV---IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
+ T + W++ IVS + D+ ++++D+ + TF+ + L HP
Sbjct: 286 ITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHP 345
Query: 291 TL-NLFAAGHDAGMVVF 306
+LF +G G +++
Sbjct: 346 YHEDLFVSGDKDGKILY 362
Score = 143 (55.4 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 45/208 (21%), Positives = 87/208 (41%)
Query: 53 PVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS 112
P+ + + + V+G + +WN L H +R+ + H W++S
Sbjct: 127 PINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGD 186
Query: 113 DDQTIRIWNWQSRNCICVLTGHNHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 171
D I+ W + N + + H + F PTD + S + D+ I++WD + + N
Sbjct: 187 DSGNIKYWQ-PNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDN 245
Query: 172 VAPGMGADDRQIKLW-----------RMNDSKAWE------VDIFRGHYNNVSCVLFHPK 214
G G D + + W + N+ K W+ + GH + VS V ++
Sbjct: 246 QLVGHGWDVKCVS-WHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQN 304
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
IVS + D+ ++++D+ + TF+
Sbjct: 305 GNWIVSASSDQLLKVFDIRTMKEMQTFK 332
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 40/154 (25%), Positives = 69/154 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
VK +S+HP++ I+S + I++WD + + + H+ V + ++ VS
Sbjct: 254 VKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASS 313
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC---I 128
D +KV++ + K + T GH + T H Y L S D+ +I W N
Sbjct: 314 DQLLKVFDIRTMKEMQTFKGHGKEV-TALALHPYHEDLFVSGDKDGKILYWIVGNPEPQA 372
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ + H+ V +HP I+ S S D T + W
Sbjct: 373 EIHSAHDADVWSLSWHPIGHILASGSNDHTTKFW 406
Score = 60 (26.2 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G D +I W + + + + +I H +V + +HP ++ S + D + + W +
Sbjct: 354 GDKDGKILYWIVGNPEP-QAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFWSRNR 410
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 220 (82.5 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 74/295 (25%), Positives = 130/295 (44%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C +SG D IK+W+ +C+ L GH + + I++ S
Sbjct: 221 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSS 278
Query: 114 DQTI-RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRK 169
D T+ R+W+ + + L HN V+ +F ++ ++V+ S D++I VWD++ +
Sbjct: 279 DSTVSRVWDVNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASPTDITL 336
Query: 170 KNVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+ V G A D DR IK+W + S V GH ++C+ +
Sbjct: 337 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-- 392
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDM- 267
+ ++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 393 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 452
Query: 268 --------TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F P+
Sbjct: 453 AALDPRAPASTLCLRTLVEHSGRVFRL-QFDEFQIISSSHDDTILIWDFLNVPPS 506
Score = 198 (74.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 70/254 (27%), Positives = 113/254 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 210 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 265
Query: 59 FHNQQPIFVSGGDDYKI-KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 117
+ + V+G D + +VW+ + + TL+ H + + F + +++ S D++I
Sbjct: 266 LQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSI 323
Query: 118 RIWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------ 168
+W+ S I VL GH V F D +VSAS D+TI+VW S
Sbjct: 324 AVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLN 381
Query: 169 --KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
K+ +A G+ D I+LW + V GH V C+ F K I
Sbjct: 382 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--I 437
Query: 219 VSNAEDKSIRLWDM 232
VS A D I++WD+
Sbjct: 438 VSGAYDGKIKVWDL 451
>CGD|CAL0005179 [details] [associations]
symbol:orf19.5410 species:5476 "Candida albicans" [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005179 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000922 GO:GO:0005874 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K01062 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 RefSeq:XP_717688.1
RefSeq:XP_717782.1 ProteinModelPortal:Q5A7Q6 STRING:Q5A7Q6
GeneID:3640588 GeneID:3640622 KEGG:cal:CaO19.12865
KEGG:cal:CaO19.5410 Uniprot:Q5A7Q6
Length = 486
Score = 158 (60.7 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 26 SSLHNGVIQLWDYRMNTL----LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYK 81
+S +NG+I D ++N + +++ + E V + H P+ ++G +D + +WN
Sbjct: 93 NSDNNGIILSKD-KINWIPKGAVKQSYQCENIVTTVKLHPNLPLVLNGCNDGNLYIWNIS 151
Query: 82 QRKCIFT---LLGHLDYIRTTFFHHEYPWILSA-SDDQTIRIWNWQSRNCICVLTGHNHY 137
+ H I F ++ P+ L+ S D TI+IW+ + N I L GH H
Sbjct: 152 NDDNTIPEKMIKAHTRAINKICFTYKKPYYLATCSSDLTIKIWD-EKFNHIRTLNGHEHT 210
Query: 138 VMCAQFHPTDD-IVVSASLDQTIRVWDI-SGLRKKN 171
V QF P D+ I+ S S D+ IRVWDI G+ K+
Sbjct: 211 VSSIQFSPVDNSILYSVSRDKNIRVWDIFQGISLKS 246
Score = 140 (54.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRM--NTLLEKFDE-HEGPVRGICFHNQQPIFVS 68
V + HP P +L+ ++G + +W+ NT+ EK + H + ICF ++P +++
Sbjct: 124 VTTVKLHPNLPLVLNGCNDGNLYIWNISNDDNTIPEKMIKAHTRAINKICFTYKKPYYLA 183
Query: 69 G-GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRN 126
D IK+W+ K I TL GH + + F IL S S D+ IR+W+
Sbjct: 184 TCSSDLTIKIWDEKFNH-IRTLNGHEHTVSSIQFSPVDNSILYSVSRDKNIRVWDIFQGI 242
Query: 127 CICVLTGHNHYVMCAQFHPTD---DIVVSASLDQTIRV 161
+ GH+ + +D D V++ S DQ+ R+
Sbjct: 243 SLKSFVGHSEWCRDLDIISSDTYGDFVLTCSNDQSARL 280
Score = 130 (50.8 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 41/163 (25%), Positives = 80/163 (49%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGV-IQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ K T++ + + F K+P+ L++ + + I++WD + N + + HE V I F
Sbjct: 161 MIKAHTRA--INKICFTYKKPYYLATCSSDLTIKIWDEKFNHI-RTLNGHEHTVSSIQFS 217
Query: 61 N-QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTT--FFHHEY-PWILSASDDQT 116
I S D I+VW+ Q + + +GH ++ R Y ++L+ S+DQ+
Sbjct: 218 PVDNSILYSVSRDKNIRVWDIFQGISLKSFVGHSEWCRDLDIISSDTYGDFVLTCSNDQS 277
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTI 159
R+ + S + ++ GH+H V +F P+ + + LD+ I
Sbjct: 278 ARLSHANSGAGVAMIVGHSHVVETVKFLPS--LQANKILDEYI 318
Score = 112 (44.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 25/83 (30%), Positives = 46/83 (55%)
Query: 151 VSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVL 210
++AS D TI++W I +AP R + N+S++W + +GH + V +
Sbjct: 347 ITASRDNTIKLWLIP---PPTIAP-----HRPPLPSKYNNSQSWLIAELKGHSSWVKSLC 398
Query: 211 FHPKSEVIVSNAEDKSIRLWDMT 233
HP + I+S ++DK+I+ WD++
Sbjct: 399 VHPNGKFIISGSDDKTIKFWDLS 421
Score = 56 (24.8 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 22/92 (23%), Positives = 45/92 (48%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK--SEVIVSNAEDKSIRLWDMTK 234
G+DD+ IK W + S E G+ N V ++ H +++ + ++ S D+++
Sbjct: 409 GSDDKTIKFWDL--SGLLET----GYVNVVKTIIGHDGFINDIDFARLKEAS----DVSE 458
Query: 235 RTCLNTFRREQERFWSEVIVSNAEDKSIRLWD 266
L ++ E+ + +S + D SI+LW+
Sbjct: 459 EDLL----KQVEKRMRCLFISGSADNSIKLWN 486
Score = 45 (20.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 253 IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERER 312
I+S ++DK+I+ WD++ E +V V + GHD + F R +
Sbjct: 406 IISGSDDKTIKFWDLSGLL---------ETGYVNVVKTII-----GHDGFINDIDFARLK 451
Query: 313 PAYTVHNNVMYYVKERFLHRLDLTNSKDSVV 343
A V + E+ + L ++ S D+ +
Sbjct: 452 EASDVSEEDLLKQVEKRMRCLFISGSADNSI 482
Score = 39 (18.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 516 RTKNFDKLAFLYLITGNLEKLKKMMKI 542
+ K +++L F Y IT + + K+ I
Sbjct: 334 KDKTYNQLGFKYCITASRDNTIKLWLI 360
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 219 (82.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 53/254 (20%), Positives = 118/254 (46%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + L P + ++ + + LW+++ + ++ H+ V + F
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ S D +++W +R H +R+ F + ++ +AS+D++I++W+
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMG----AD 179
+ + L H H+V CA+F P ++VS S D+TI++WD + + N + +G D
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 180 DRQ----IKLWRMNDS-KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
I + + K W+V + ++ H V+C+ FHP +++ + D +++
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLK 253
Query: 229 LWDMTKRTCLNTFR 242
+ D+ + + T +
Sbjct: 254 ILDLLEGRLIYTLQ 267
Score = 170 (64.9 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 39/163 (23%), Positives = 79/163 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHN 61
++F+ +A V+ + F ++ ++ + I++W YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ VS +D IK+W+ ++C+ + + F+ I SA DQT+++W+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + H+ V C FHP+ + +++AS D T+++ D+
Sbjct: 215 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 257
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 58/235 (24%), Positives = 92/235 (39%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S + I++WD + F + G + F+ S G
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGS 206
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + K + H + FH ++++AS D T++I + I L
Sbjct: 207 DQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTL 266
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW--DISGLRKKNVAPGMGADDRQIKLWRMN 189
GH V F ++ S D + +W + L K G R +K R++
Sbjct: 267 QGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCK------GLTKRNLK--RLH 318
Query: 190 -DSKAWEVDIF----RGHYNNVSCVLFHPKSEVI---VSNAEDKSIRLWDMTKRT 236
DS +DI+ H V V +PK EVI +S I +D T T
Sbjct: 319 FDSPPHLLDIYPRTPHPHEEKVETVEINPKLEVIDLQISTPPVMDILSFDSTTTT 373
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 41/152 (26%), Positives = 73/152 (48%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ IK+W M + + ++R H + V C F P +IVS +EDK+I++WD T + C
Sbjct: 121 SEDKSIKVWSMYRQR-FLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
+N F + F + V I S D+++++WD+ L ++ + H
Sbjct: 179 VNNFS-DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFH 237
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D + + R YT+ +
Sbjct: 238 PSGNYLITASSDGTLKILDLLEGRLIYTLQGH 269
Score = 138 (53.6 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
DR ++LW + D + + F+ H V V F + + + +EDKSI++W M ++ L
Sbjct: 81 DRTVRLW-IPDKRG-KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLY 138
Query: 240 TFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTF 276
+ R +F + +IVS +EDK+I++WD T + C+N F
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Score = 38 (18.4 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 48/201 (23%), Positives = 77/201 (38%)
Query: 736 VKVAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVI-LFDVQQKRAL--AQVKVAKC 792
V+V K V C F+ L+ +D + + D+ + R + Q
Sbjct: 215 VRVNKLLQHYQVHSGGVNCIS-FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Query: 793 RHVLYNKGEEIFYAG---TGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-WSPDMT 848
V ++KG E+F +G T LL R + KR L ++ H++ P
Sbjct: 274 FTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDSPPHLLDIYPRTP 333
Query: 849 HLALLSKHTLHICNRKMEGAGL-MKSDVINNIDSSLAATEVDVQGWGDDADLGNQV--YY 905
H T+ I N K+E L + + + +I S + T + G D G + Y+
Sbjct: 334 HPHEEKVETVEI-NPKLEVIDLQISTPPVMDILSFDSTTTTETSG-RTLPDKGEEACGYF 391
Query: 906 LDREC-SPHVLRIDPTEFKFK 925
L+ SP L PT K K
Sbjct: 392 LNPSLMSPECL---PTTTKKK 409
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 219 (82.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 62/249 (24%), Positives = 110/249 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ P W + + VI++WD L H VRG+ + P S G+
Sbjct: 175 VRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGE 234
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ + K I GHL + + H + ++ D T RIW+ +++ + L
Sbjct: 235 DRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTL 294
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQI----KLWR 187
TGH + V T+ +++ S D T+R+WD++ + R I L+
Sbjct: 295 TGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYM 354
Query: 188 M-----NDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
++ K W V GH + V+C+ + + V+VS ++ ++ WD RT
Sbjct: 355 FASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAANSEG-VLVSGGDNGTMFFWDW--RT 411
Query: 237 CLNTFRREQ 245
N F+R Q
Sbjct: 412 GYN-FQRFQ 419
Score = 168 (64.2 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR I F +G D IK+W+ K +L GH+ +R ++P++
Sbjct: 171 HLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLF 230
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S +D+ ++ W+ + I GH V HPT D++ ++ D T R+WD+ K
Sbjct: 231 SCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMR--TK 288
Query: 170 KNVAPGMG-----------ADDRQIKLWRMNDS--KAWE------VDIFRGHYNNVSCVL 210
NV G A + QI + +DS + W+ V H +V ++
Sbjct: 289 ANVHTLTGHTNTVASVVAQATNPQI-ITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIV 347
Query: 211 FHPKSEVIVSNAEDKSIRLW 230
HP + S + D +I+ W
Sbjct: 348 LHPSLYMFASASPD-NIKQW 366
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 37/128 (28%), Positives = 65/128 (50%)
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+DRQ+K W + +K + + GH + V + HP +V+ ++ D + R+WDM + +
Sbjct: 234 EDRQVKCWDLEYNKV--IRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANV 291
Query: 239 NTFRREQERFWSEV-------IVSNAEDKSIRLWDMT--KRTCLNTFRREQERFWVLVAH 289
+T S V I++ + D ++RLWD+ K C T ++ R VL H
Sbjct: 292 HTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVL--H 349
Query: 290 PTLNLFAA 297
P+L +FA+
Sbjct: 350 PSLYMFAS 357
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 35/161 (21%), Positives = 69/161 (42%)
Query: 194 WEVD-IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC-------LNTFRREQ 245
W++ + GH V C+ P +E + A D+ I++WD+ ++T R
Sbjct: 162 WKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVA 221
Query: 246 ERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA-AGHDAGMV 304
+ S ED+ ++ WD+ + + + L HPT+++ A +G D+
Sbjct: 222 VSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTAR 281
Query: 305 VFKFERERPAYTV--HNNVMYYVKERFLHRLDLTNSKDSVV 343
++ + +T+ H N + V + + +T S DS V
Sbjct: 282 IWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTV 322
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 153 (58.9 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 46/166 (27%), Positives = 76/166 (45%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
+ E S V ++F P ++ S + ++ WD T H V I +
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 167
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFH--HEYP---WILSASDDQT 116
SG + +I +W+ K + TL GH +I + H P ++ S+S D +
Sbjct: 168 GRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGS 227
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+RIW+ + C +LTGH V C ++ D ++ SAS D+TI+VW
Sbjct: 228 VRIWDTTAGRCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVW 272
Score = 140 (54.3 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 67 VSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
VSG DD+ + +W+ + +K + + GH I F + + SAS D++I++W+ ++
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 404
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
+ L GH V + ++VS S D T++VWD+ + PG AD+
Sbjct: 405 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGH-ADE 458
Score = 134 (52.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 33/119 (27%), Positives = 51/119 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
LT+ A + + F P + S+ + I+LWD R L H V I +
Sbjct: 365 LTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ VSG D +KVW+ K +K L GH D + + + + S D+ +RIW
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 33/145 (22%), Positives = 65/145 (44%)
Query: 19 PKRPWILSSLHNGVIQLWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKV 77
P+R ++S + + LW + L + H+ + + F I S D IK+
Sbjct: 341 PER--LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKL 398
Query: 78 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHY 137
W+ + K + +L GH+ + + + ++S S D T+++W+ +++ L GH
Sbjct: 399 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADE 458
Query: 138 VMCAQFHPTDDIVVSASLDQTIRVW 162
V + P V S D+ +R+W
Sbjct: 459 VYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 117 (46.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD + LW + K + GH ++ VLF P S ++ S + DKSI+LWD
Sbjct: 347 GSDDFTLFLWSPAEDKK-PLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 405
Query: 237 CLNTFRRE----QERFWS---EVIVSNAEDKSIRLWDM 267
L + R + WS ++VS + D ++++WD+
Sbjct: 406 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Score = 109 (43.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 35/117 (29%), Positives = 55/117 (47%)
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD------ISGLRKKNVAP---GMGADDR 181
+TGH + F P IV SAS D++I++WD ++ LR A AD R
Sbjct: 368 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 182 QIKLWRMNDS--KAWEVDIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+ + +DS K W+V + GH + V V + P + + S +DK +R+W
Sbjct: 428 LL-VSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 107 (42.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 38/143 (26%), Positives = 62/143 (43%)
Query: 5 FETKSAR--VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICF-- 59
F K R V +S+ P + S NG I LWD + + H + G+ +
Sbjct: 150 FTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEP 209
Query: 60 -H-NQQPIFV-SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
H N + +V S D +++W+ +C L GH + + + + SAS D+T
Sbjct: 210 LHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGD-GLLYSASQDRT 268
Query: 117 IRIWNWQSRNCIC-VLTGHNHYV 138
I++W +C L GH H+V
Sbjct: 269 IKVWRAHD-GVLCRTLQGHGHWV 290
Score = 97 (39.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+C +L GH + + + F ++ S S D T+R W+ + GH H+V+ +
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 144 HPTDDIVVSASLDQTIRVWDIS 165
P + S + I +WD S
Sbjct: 165 SPDGRKLASGCKNGQILLWDPS 186
Score = 93 (37.8 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKRTCL 238
D+ IKLW K + RGH V + + S ++VS + D ++++WD+ ++ +
Sbjct: 393 DKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAM 450
Query: 239 NTFRREQERF---WS---EVIVSNAEDKSIRLW 265
+ E + WS + + S +DK +R+W
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 92 (37.4 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 27/132 (20%), Positives = 53/132 (40%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F SG D ++ W+ FT GH ++ + + + +
Sbjct: 113 HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLA 172
Query: 110 SASDDQTIRIWNWQSRNCIC-VLTGHNHYVMCAQFHPTDD-----IVVSASLDQTIRVWD 163
S + I +W+ + + L GH+ ++ + P V S+S D ++R+WD
Sbjct: 173 SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWD 232
Query: 164 ISGLRKKNVAPG 175
+ R + + G
Sbjct: 233 TTAGRCERILTG 244
Score = 74 (31.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 177 GADDRQIKLWRMNDSKAWEVD-IFRGH---YNNVSCVLFH--PKSEVIVSNAEDKSIRLW 230
G + QI LW + K +V GH +S H P+ + S+++D S+R+W
Sbjct: 174 GCKNGQILLWDPSTGK--QVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIW 231
Query: 231 DMTKRTCLNTFRREQERF----WSE--VIVSNAEDKSIRLW 265
D T C + W ++ S ++D++I++W
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW 272
Score = 69 (29.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/99 (24%), Positives = 39/99 (39%)
Query: 12 VKGLSFHP--KRP---WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIF 66
+ GLS+ P P ++ SS +G +++WD H V + + ++
Sbjct: 202 ITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLY 261
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 105
S D IKVW TL GH ++ T +Y
Sbjct: 262 -SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 299
Score = 56 (24.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCV---------LFHPKSEVIVSNAEDKSIR 228
+ DR IK+WR +D GH+ N + F P +E V N +D
Sbjct: 264 SQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEP-AEASV-NPQDLQGS 321
Query: 229 LWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLW 265
L ++ +R L+ + + + E +VS ++D ++ LW
Sbjct: 322 LQELKERA-LSRYNLVRGQ-GPERLVSGSDDFTLFLW 356
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 221 (82.9 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
++ L K I++ +G I++WD +L H+ + + FH SG
Sbjct: 65 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 124
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ CIF H +R F + W+ SA+DD T+++W+ + +
Sbjct: 125 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 184
Query: 132 TGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDI 164
TGH V +FHP+ + ++ S S TIR WD+
Sbjct: 185 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 218
Score = 175 (66.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 34/116 (29%), Positives = 60/116 (51%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H P+ + ++ + V+G I+VW+ + K + TLLGH I + FH ++
Sbjct: 61 HTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVA 120
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
S S D I++W+ + + CI H V C +F P + SA+ D T+++WD++
Sbjct: 121 SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLT 176
Score = 174 (66.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 41/154 (26%), Positives = 67/154 (43%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + K+ H VR + F S
Sbjct: 105 ANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASA 164
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRNCI 128
DD+ +K+W+ K +F GH + FH ++L S S TIR W+ + + +
Sbjct: 165 ADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV 224
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ V C F+P D + ++RV+
Sbjct: 225 SCIEEEATPVRCILFNP-DGCCLYGGFQDSLRVY 257
Score = 164 (62.8 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ VW+ Q + L GH I + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNVWSVAQLRHDL-LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 93
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIK 184
+ L GH + FHP V S SLD I++WD+ R+K + + ++
Sbjct: 94 AKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV---RRKGCIFKYKSHTQAVR 150
Query: 185 LWRMNDS-------------KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSN 221
R + K W++ F GHY V+ V FHP E ++++
Sbjct: 151 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLAS 206
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/143 (23%), Positives = 67/143 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K + GH N+ + FHP + S + D I+LWD+ ++
Sbjct: 80 GSQSGSIRVWDLEAAKILRTLL--GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 137
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ ++ + RF + + S A+D +++LWD+T + F V+ H
Sbjct: 138 CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFH 197
Query: 290 PTLNLFAAGHDAGMVVFKFERER 312
P++ A + M + ++ E+
Sbjct: 198 PSIEYLLASGSSSMTIRFWDLEK 220
Score = 134 (52.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 28/129 (21%), Positives = 60/129 (46%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ- 62
K+++ + V+ L F P W+ S+ + ++LWD ++ +F H GPV + FH
Sbjct: 141 KYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSI 200
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ + SG I+ W+ ++ + + +R F+ + + D ++R++ W
Sbjct: 201 EYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGW 259
Query: 123 QSRNCICVL 131
+ C V+
Sbjct: 260 EPERCFDVV 268
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 221 (82.9 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
++ L K I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ CIF H +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 132 TGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDI 164
TGH V +FHP+ + ++ S S TIR WD+
Sbjct: 186 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 219
Score = 187 (70.9 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 45/176 (25%), Positives = 80/176 (45%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ VW+ + C+ +L GH I + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIK 184
+ L GH + FHP V S SLD I++WD+ R+K + + ++
Sbjct: 95 AKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV---RRKGCIFKYKSHTQAVR 151
Query: 185 LWRMNDS-------------KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSN 221
R + K W++ F GHY V+ V FHP E ++++
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLAS 207
Score = 181 (68.8 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ +W + H P+ + ++ + V+G I+VW+ + K + TLLGH
Sbjct: 45 VNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + CI H V C +F P + S
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDIS 165
A+ D T+++WD++
Sbjct: 165 AADDHTVKLWDLT 177
Score = 174 (66.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 41/154 (26%), Positives = 67/154 (43%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + K+ H VR + F S
Sbjct: 106 ANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRNCI 128
DD+ +K+W+ K +F GH + FH ++L S S TIR W+ + + +
Sbjct: 166 ADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV 225
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ V C F+P D + ++RV+
Sbjct: 226 SCIEEEATPVRCILFNP-DGCCLYGGFQDSLRVY 258
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/143 (23%), Positives = 67/143 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ I++W + +K + GH N+ + FHP + S + D I+LWD+ ++
Sbjct: 81 GSQSGSIRVWDLEAAKILRTLL--GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C+ ++ + RF + + S A+D +++LWD+T + F V+ H
Sbjct: 139 CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFH 198
Query: 290 PTLNLFAAGHDAGMVVFKFERER 312
P++ A + M + ++ E+
Sbjct: 199 PSIEYLLASGSSSMTIRFWDLEK 221
Score = 134 (52.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 28/129 (21%), Positives = 60/129 (46%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ- 62
K+++ + V+ L F P W+ S+ + ++LWD ++ +F H GPV + FH
Sbjct: 142 KYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSI 201
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ + SG I+ W+ ++ + + +R F+ + + D ++R++ W
Sbjct: 202 EYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGW 260
Query: 123 QSRNCICVL 131
+ C V+
Sbjct: 261 EPERCFDVV 269
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 222 (83.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 50/160 (31%), Positives = 77/160 (48%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LS +G ++LW + T L + H PV F FVS
Sbjct: 523 SGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 582
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
GG D ++W + + GHL + T FH +I + S D+T+R+W+ + NC+
Sbjct: 583 GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCV 642
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 167
+ TGH + F P + + + D + +WDI GL
Sbjct: 643 RIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGL 682
Score = 186 (70.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/201 (23%), Positives = 86/201 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV G F + +S +D +++W+ + C+ GH + T F + +
Sbjct: 522 HSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 581
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S D+ R+W + + GH V C +FHP + + + S D+T+R+WD+
Sbjct: 582 SGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNC 641
Query: 170 KNVAPG-MG-------ADDRQIKLWRMNDSKA--WE------VDIFRGHYNNVSCVLFHP 213
+ G G + + + D + W+ V +GH + + + F
Sbjct: 642 VRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSR 701
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
E++ S + D ++RLWD K
Sbjct: 702 DGEILASGSMDNTVRLWDAVK 722
Score = 167 (63.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 58/228 (25%), Positives = 99/228 (43%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ V G D ++VW+ +K +R+ + I SDD RI + ++
Sbjct: 464 MIVGGFADSTVRVWSVTPKK-----------LRSVKAAADLSLIDKESDDVLERIMDEKT 512
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------GLRKKNV------ 172
+ + +L GH+ V F P + ++S S D T+R+W + G + N
Sbjct: 513 ASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 572
Query: 173 -AP-GM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
+P G G DR +LW + + + IF GH +V+C FHP S I + + D++
Sbjct: 573 FSPYGYYFVSGGHDRVARLWATDHYQP--LRIFAGHLADVTCTRFHPNSNYIATGSADRT 630
Query: 227 IRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDM 267
+RLWD+ C+ F + S + + A D + LWD+
Sbjct: 631 VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
Score = 146 (56.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/147 (23%), Positives = 61/147 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F P + +S H+ V +LW L F H V FH +G D ++
Sbjct: 573 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVR 632
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ C+ GH I + F ++ + + D + +W+ + L GH
Sbjct: 633 LWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 692
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWD 163
+ +F +I+ S S+D T+R+WD
Sbjct: 693 TIYALRFSRDGEILASGSMDNTVRLWD 719
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 164 (62.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 16 SFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
SF P ++S + ++WD T L H V + + + +G D
Sbjct: 155 SFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNT 214
Query: 75 IKVWNYKQRKCIFT-LLGHLDYIRTTF---FHHE---YPWILSASDDQTIRIWNWQSRNC 127
+++W+ K+ + + L GH+ +I + +H + +P + SAS D T+RIW+ S+
Sbjct: 215 VRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRA 274
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
VL+GH V C ++ T I S S D+TI+VW+
Sbjct: 275 DIVLSGHKGSVTCVRWGGTGKIYTS-SHDRTIKVWN 309
Score = 157 (60.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 24 ILSSLHNGVIQLWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
++S+ + + LWD ++ + + H+ V + F S G D +K+WN +
Sbjct: 377 LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRD 436
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
K I TL GH+ + F + ++S+S D T+++WN ++ L GH V
Sbjct: 437 GKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVD 496
Query: 143 FHPTDDIVVSASLDQTIRVW 162
+ P V S D+ IR+W
Sbjct: 497 WSPDGQKVGSGGKDKAIRIW 516
Score = 141 (54.7 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 54/234 (23%), Positives = 99/234 (42%)
Query: 59 FHNQQ---PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 115
+H QQ P S D +++W+ ++ L GH + + I ++S D+
Sbjct: 245 YHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDR 303
Query: 116 TIRIWNWQSRNCICVLTGH----NH------YVMCAQFHPTDDIVVSASLDQTI----RV 161
TI++WN Q+ I L+ H NH +++ +H V + D+ R
Sbjct: 304 TIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKRF 363
Query: 162 WDISGLRKKNVAPGMGA-DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVS 220
+ + K V + A DD + LW +S + V GH V+ V F P I S
Sbjct: 364 EKAATINNKIVEKLVSASDDFTMYLWDP-ESSSKPVARLLGHQKEVNHVTFSPDMAYIAS 422
Query: 221 NAEDKSIRLWDMTKRTCLNTFRREQERFW-------SEVIVSNAEDKSIRLWDM 267
D ++LW+ + T R + S ++VS+++D ++++W++
Sbjct: 423 AGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNV 476
Score = 136 (52.9 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 67 VSGGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
VS DD+ + +W+ + K + LLGH + F + +I SA D +++WN +
Sbjct: 378 VSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDG 437
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
I L GH V F ++VS+S D T++VW++ + PG
Sbjct: 438 KFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPG 487
Score = 130 (50.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 54/222 (24%), Positives = 89/222 (40%)
Query: 84 KCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
+C ++ GH + I T F ++S S D T RIW+ + + L GH +V+
Sbjct: 139 RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVS 198
Query: 143 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFR-- 200
+ P ++ + S+D T+R+WD KK A +GA + W S AWE +
Sbjct: 199 YSPNGAMIATGSMDNTVRIWDA----KKGQA--LGAPLKGHVKWIT--SLAWEPYHLQQS 250
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--IVSNAE 258
GH S S V + + K + + + R W I +++
Sbjct: 251 GHPRLASA---SKDSTVRIWDVISKRADIVLSGHKGSVTCVR------WGGTGKIYTSSH 301
Query: 259 DKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHD 300
D++I++W+ T + T R L L A HD
Sbjct: 302 DRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHD 343
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 31/109 (28%), Positives = 48/109 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V ++F P +I S+ + ++LW+ R + H G V CF + VS
Sbjct: 408 VNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSK 467
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
D +KVWN + K L GH D + + + + S D+ IRIW
Sbjct: 468 DTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 119 (46.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 31/116 (26%), Positives = 50/116 (43%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
VSG D ++W+ + TL GH ++ + I + S D T+RIW+ +
Sbjct: 165 VSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQ 224
Query: 127 CI-CVLTGHNHYVMCAQFHPTD------DIVVSASLDQTIRVWDISGLRKKNVAPG 175
+ L GH ++ + P + SAS D T+R+WD+ R V G
Sbjct: 225 ALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSG 280
Score = 112 (44.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 38/157 (24%), Positives = 67/157 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL-EKFDEHEGPVRGIC---FHNQQ---P 64
V +S+ P I + + +++WD + L H + + +H QQ P
Sbjct: 194 VLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHP 253
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
S D +++W+ ++ L GH + + I ++S D+TI++WN Q+
Sbjct: 254 RLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRTIKVWNSQT 312
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 161
I L+ H H V TD I+ +A D T +V
Sbjct: 313 GTLIQTLSAHAHRVNHLALS-TDFILRTAYHDHTGKV 348
Score = 105 (42.0 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKRTCL 238
D +KLW D K + RGH V F S ++VS+++D ++++W++ T +
Sbjct: 426 DNHVKLWNGRDGKF--ITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSE 483
Query: 239 NTFRREQERF---WS---EVIVSNAEDKSIRLW 265
+ + E F WS + + S +DK+IR+W
Sbjct: 484 DLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 43 (20.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 840 HVVWSPDMTHLA 851
HV +SPDM ++A
Sbjct: 410 HVTFSPDMAYIA 421
Score = 41 (19.5 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 175 GMGADDRQIKLWR 187
G G D+ I++WR
Sbjct: 505 GSGGKDKAIRIWR 517
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 220 (82.5 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 61/229 (26%), Positives = 97/229 (42%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYK 81
P + S N +DY++N + F HE PV I H + +S +D K+
Sbjct: 334 PNVTSCTENVSAAKFDYKLNNI---FRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLP 390
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCA 141
Q + T GH D++ FH + ++S D TI++W+ C L GHNH V
Sbjct: 391 QGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSC 450
Query: 142 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS---------- 191
+H D V SASLD T ++WD++ R + G I+ + ++
Sbjct: 451 TWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTL 510
Query: 192 KAWEVDIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
W+ + GH ++V+ F P+ +I S +LWD K
Sbjct: 511 SVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRK 559
Score = 218 (81.8 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 61/234 (26%), Positives = 99/234 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ G FHP + +S + I+LWD + H V +H+ S
Sbjct: 405 LSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASL 464
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D K+W+ +C +TL GH D + + F +L+AS D+T+ +W+ ++ C L
Sbjct: 465 DMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSL 524
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR---KKNVAPGMGAD---DRQIKL 185
GH H V A F P I+ S ++WD L +V P G + D+ ++
Sbjct: 525 YGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRV 584
Query: 186 W---------RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+ D K+ ++ GH + V V+F E + S D +IRLW
Sbjct: 585 LAQASANGIIHLLDLKSGQIHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 197 (74.4 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F V + HP R +++S + + ++ +L H + G CFH
Sbjct: 356 FRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGS 415
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ D IK+W+ + +C TL GH + + +H ++ SAS D T +IW+ S
Sbjct: 416 KLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNS 475
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
C L GH V +F P +I+++AS D+T+ VWD
Sbjct: 476 ERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWD 514
Score = 68 (29.0 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 28/128 (21%), Positives = 50/128 (39%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ + +W K E ++ GH ++V+ F P+ +I S +LWD K +
Sbjct: 507 DKTLSVWDARTGKC-EQSLY-GHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIV 564
Query: 240 TF-----RREQERF--WSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
+ + F V+ + + I L D+ E E V+ +H
Sbjct: 565 SIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDLKSGQIHKLVGHESEVHSVVFSHLGE 624
Query: 293 NLFAAGHD 300
NL++ G D
Sbjct: 625 NLYSGGSD 632
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 219 (82.2 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 59/201 (29%), Positives = 95/201 (47%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
HE V C + V+G DD +KVW + + ++TL+GH + T+ +I+
Sbjct: 254 HEDHVI-TCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIV 312
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SG-- 166
S S D+T+++W+ + + L GH V C I+V+ S D T+RVWD+ SG
Sbjct: 313 SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRH 370
Query: 167 ---LRKKNVA------PGM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
L + A G G D +K+W + + + GH N V +LF
Sbjct: 371 LATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFES 428
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
+ ++ S + D SIR+WD T+
Sbjct: 429 ERSIVCSGSLDTSIRVWDFTR 449
Score = 196 (74.1 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 47/143 (32%), Positives = 71/143 (49%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
+I+S + +++W +LL H VR C I V+G D ++VW+ +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDVES 367
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
+ + TL GH +R F + ++S D T++IWN + CI LTGHN+ V
Sbjct: 368 GRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 143 FHPTDDIVVSASLDQTIRVWDIS 165
F IV S SLD +IRVWD +
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFT 448
Score = 171 (65.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 54/227 (23%), Positives = 104/227 (45%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
VSG D +KVW+ + TL GH +R +++ S D T+R+W+ +S
Sbjct: 312 VSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI--LVTGSRDTTLRVWDVESGR 369
Query: 127 CICVLTGHNHYVMCAQFHPTD------DIVV---SASLDQTIR--------VWDISGLRK 169
+ L GH+ V C QF T D V +A + IR V+ + +
Sbjct: 370 HLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 170 KNVAPGMGADDRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
+++ G+ D I++W + E V + +GH + S + + ++VS D +R
Sbjct: 430 RSIVCS-GSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVSCNADSHVR 486
Query: 229 LWDMTKRTCLNTFRREQERF----W--SEVIVSNAEDKSIRLWDMTK 269
+WD+ + TC++ + W ++ ++++D +++LWD+ +
Sbjct: 487 VWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIER 533
Score = 154 (59.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 33/144 (22%), Positives = 72/144 (50%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ- 82
++S ++ +++W+ + H V + F +++ I SG D I+VW++ +
Sbjct: 391 VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRP 450
Query: 83 --RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMC 140
++C+ L GH T+ ++S + D +R+W+ C+ +L+GH +
Sbjct: 451 EGQECVALLQGHTSL--TSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITS 508
Query: 141 AQFHPTDDIVVSASLDQTIRVWDI 164
Q+ + +V ++S D T+++WDI
Sbjct: 509 LQWFGRN-MVATSSDDGTVKLWDI 531
Score = 154 (59.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 46/191 (24%), Positives = 81/191 (42%)
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHN 135
K WN L GH D++ T H+ +++ SDD T+++W + L GH
Sbjct: 238 KNWNANPIMGSAVLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHT 296
Query: 136 HYVMCAQFHPTDDIVVSASLDQTIRVWD-ISG------------LRKKNVAPGM---GAD 179
V +Q +VS S D+T++VW + G +R +A + G+
Sbjct: 297 GGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSR 356
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D +++W + + + GH+ V CV F +VS D ++++W+ C+
Sbjct: 357 DTTLRVWDVESGR--HLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIR 412
Query: 240 TFRREQERFWS 250
T R +S
Sbjct: 413 TLTGHNNRVYS 423
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK-- 234
G D +K+W + + + GH N V +LF + ++ S + D SIR+WD T+
Sbjct: 394 GGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 451
Query: 235 -RTCL-----NTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVA 288
+ C+ +T + ++VS D +R+WD+ + TC++ + L
Sbjct: 452 GQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW 511
Query: 289 HPTLNLFAAGHDAGMV-VFKFER 310
N+ A D G V ++ ER
Sbjct: 512 FGR-NMVATSSDDGTVKLWDIER 533
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 14/39 (35%), Positives = 14/39 (35%)
Query: 371 RNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVW 409
R N Y L ESER V G T I VW
Sbjct: 412 RTLTGHNNRVYSLLF----ESERSIVCSGSLDTSIR-VW 445
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 219 (82.2 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 59/201 (29%), Positives = 95/201 (47%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
HE V C + V+G DD +KVW + + ++TL+GH + T+ +I+
Sbjct: 254 HEDHVI-TCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIV 312
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SG-- 166
S S D+T+++W+ + + L GH V C I+V+ S D T+RVWD+ SG
Sbjct: 313 SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRH 370
Query: 167 ---LRKKNVA------PGM----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
L + A G G D +K+W + + + GH N V +LF
Sbjct: 371 LATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFES 428
Query: 214 KSEVIVSNAEDKSIRLWDMTK 234
+ ++ S + D SIR+WD T+
Sbjct: 429 ERSIVCSGSLDTSIRVWDFTR 449
Score = 196 (74.1 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 47/143 (32%), Positives = 71/143 (49%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
+I+S + +++W +LL H VR C I V+G D ++VW+ +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDVES 367
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
+ + TL GH +R F + ++S D T++IWN + CI LTGHN+ V
Sbjct: 368 GRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 143 FHPTDDIVVSASLDQTIRVWDIS 165
F IV S SLD +IRVWD +
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFT 448
Score = 171 (65.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 54/227 (23%), Positives = 104/227 (45%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
VSG D +KVW+ + TL GH +R +++ S D T+R+W+ +S
Sbjct: 312 VSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI--LVTGSRDTTLRVWDVESGR 369
Query: 127 CICVLTGHNHYVMCAQFHPTD------DIVV---SASLDQTIR--------VWDISGLRK 169
+ L GH+ V C QF T D V +A + IR V+ + +
Sbjct: 370 HLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 170 KNVAPGMGADDRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
+++ G+ D I++W + E V + +GH + S + + ++VS D +R
Sbjct: 430 RSIVCS-GSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVSCNADSHVR 486
Query: 229 LWDMTKRTCLNTFRREQERF----W--SEVIVSNAEDKSIRLWDMTK 269
+WD+ + TC++ + W ++ ++++D +++LWD+ +
Sbjct: 487 VWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIER 533
Score = 154 (59.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 33/144 (22%), Positives = 72/144 (50%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ- 82
++S ++ +++W+ + H V + F +++ I SG D I+VW++ +
Sbjct: 391 VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRP 450
Query: 83 --RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMC 140
++C+ L GH T+ ++S + D +R+W+ C+ +L+GH +
Sbjct: 451 EGQECVALLQGHTSL--TSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITS 508
Query: 141 AQFHPTDDIVVSASLDQTIRVWDI 164
Q+ + +V ++S D T+++WDI
Sbjct: 509 LQWFGRN-MVATSSDDGTVKLWDI 531
Score = 154 (59.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 46/191 (24%), Positives = 81/191 (42%)
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHN 135
K WN L GH D++ T H+ +++ SDD T+++W + L GH
Sbjct: 238 KNWNANPIMGSAVLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHT 296
Query: 136 HYVMCAQFHPTDDIVVSASLDQTIRVWD-ISG------------LRKKNVAPGM---GAD 179
V +Q +VS S D+T++VW + G +R +A + G+
Sbjct: 297 GGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSR 356
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D +++W + + + GH+ V CV F +VS D ++++W+ C+
Sbjct: 357 DTTLRVWDVESGR--HLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIR 412
Query: 240 TFRREQERFWS 250
T R +S
Sbjct: 413 TLTGHNNRVYS 423
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK-- 234
G D +K+W + + + GH N V +LF + ++ S + D SIR+WD T+
Sbjct: 394 GGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 451
Query: 235 -RTCL-----NTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVA 288
+ C+ +T + ++VS D +R+WD+ + TC++ + L
Sbjct: 452 GQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW 511
Query: 289 HPTLNLFAAGHDAGMV-VFKFER 310
N+ A D G V ++ ER
Sbjct: 512 FGR-NMVATSSDDGTVKLWDIER 533
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 14/39 (35%), Positives = 14/39 (35%)
Query: 371 RNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVW 409
R N Y L ESER V G T I VW
Sbjct: 412 RTLTGHNNRVYSLLF----ESERSIVCSGSLDTSIR-VW 445
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 217 (81.4 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 54/254 (21%), Positives = 115/254 (45%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + + F P + ++ + + LW+ + ++ H+ V + F
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGN 73
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ S D +++W +R H +R+ F + ++ +AS+D++I++WN
Sbjct: 74 LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYR 133
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMG----AD 179
+ + L H H+V CA+F P ++VS S D+TI++WD + + N + +G D
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 180 DRQ-----IKLWRMNDSKAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
+ K W++ + ++ H V+CV FHP I++ + D +++
Sbjct: 194 FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLK 253
Query: 229 LWDMTKRTCLNTFR 242
+ D+ + + T +
Sbjct: 254 ILDLLEGRLIYTLQ 267
Score = 206 (77.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 57/256 (22%), Positives = 107/256 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P + S+ + ++LW +F H PVR + F + +
Sbjct: 63 VTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IKVWN +++ +++L H ++R F + I+S S+D+TI+IW+ ++ C+
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-------------SGLRKKNVAPG--- 175
+ + F+P + SA D T+++WDI G+ + P
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 176 --MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW--D 231
+ D +K+ + + + + +GH V V F E+ S D + LW +
Sbjct: 243 IITASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTN 300
Query: 232 MTKRTCLNTFRREQER 247
C + +R +R
Sbjct: 301 FDYLNCKDMIKRNLKR 316
Score = 170 (64.9 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 39/163 (23%), Positives = 79/163 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHN 61
++F+ +A V+ + F ++ ++ + I++W+ YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ VS +D IK+W+ ++C+ + + F+ I SA D T++IW+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWD 214
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + H+ V C FHP+ + +++AS D T+++ D+
Sbjct: 215 IRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDL 257
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 52/214 (24%), Positives = 87/214 (40%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S + I++WD + F + G + F+ S G
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGS 206
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D+ +K+W+ + K + H + FH +I++AS D T++I + I L
Sbjct: 207 DHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTL 266
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW--DISGLRKKNVAPGMGADDRQIKLWRMN 189
GH V F ++ S D + +W + L K++ R +K R++
Sbjct: 267 QGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMIK------RNLK--RLH 318
Query: 190 -DSKAWEVDIF----RGHYNNVSCVLFHPKSEVI 218
DS VDI+ H + V +PK EVI
Sbjct: 319 FDSSPHLVDIYPRTPHPHEGKIETVEINPKLEVI 352
Score = 150 (57.9 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ IK+W M + + ++R H + V C F P +IVS +EDK+I++WD T + C
Sbjct: 121 SEDKSIKVWNMYRQR-FLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
+N F + F + V I S D ++++WD+ L ++ + H
Sbjct: 179 VNNFS-DSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N + A D + + R YT+ +
Sbjct: 238 PSGNYIITASSDGTLKILDLLEGRLIYTLQGH 269
Score = 139 (54.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
DR ++LW + D + + F+ H V V F + + + +EDKSI++W+M ++ L
Sbjct: 81 DRTVRLW-IPDKRGKSSE-FKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLY 138
Query: 240 TFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTF 276
+ R +F + +IVS +EDK+I++WD T + C+N F
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Score = 56 (24.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 49/214 (22%), Positives = 89/214 (41%)
Query: 719 ADHVI-LFDVQQKRALAQVKVAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVI-LF 776
+DH + ++D++ + L +V H V C F+ ++ +D + +
Sbjct: 206 SDHTVKIWDIRVNKLLQHYQV----H-----SGGVNCVS-FHPSGNYIITASSDGTLKIL 255
Query: 777 DVQQKRAL--AQVKVAKCRHVLYNKGEEIFYAG---TGALLCR-EADHVILFDVQQKRAL 830
D+ + R + Q V ++KG E+F +G T LL R D++ D+ KR L
Sbjct: 256 DLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMI-KRNL 314
Query: 831 AQVKVAKCRHVV-WSPDMTHLALLSKHTLHICNRKMEGAGLMKSD--VINNID-SSLAAT 886
++ H+V P H T+ I N K+E L + V++ + S T
Sbjct: 315 KRLHFDSSPHLVDIYPRTPHPHEGKIETVEI-NPKLEVIDLQTASPPVVDILSFDSTTTT 373
Query: 887 EVDVQGWGDDADLGNQVYY----LDRECSPHVLR 916
+ V+ D + N+ + L +CSP L+
Sbjct: 374 DTTVRTLPDKGEEINRYFLNPSLLSPDCSPAALK 407
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 217 (81.4 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 46/153 (30%), Positives = 73/153 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++F P W + + I++WD L H G VRG+ N+ S GD
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGD 232
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ +Q K I + GHL + H +L+ D R+W+ +++ I VL
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVL 292
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
H+ V PTD V++ S D TI+ WD+
Sbjct: 293 P-HDSDVFSVLARPTDPQVITGSHDSTIKFWDL 324
Score = 199 (75.1 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 58/214 (27%), Positives = 92/214 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR + F F +G D IK+W+ TL GH+ +R + + ++
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMF 228
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
SA DD+ ++ W+ + I GH H V C HPT D+V++ D RVWDI +
Sbjct: 229 SAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQ 288
Query: 170 KNVAPGMG--------ADDRQIKLWRMNDS--KAWEVDIFRG------HYNNVSCVLFHP 213
V P D Q+ + +DS K W++ + H V + HP
Sbjct: 289 IFVLPHDSDVFSVLARPTDPQV-ITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHP 347
Query: 214 KSEVIVSNAEDKSIRLWDMTK-RTCLNTFRREQE 246
K VS + D +I+ + + K C N +++
Sbjct: 348 KENDFVSASAD-NIKKFSLPKGEFCHNMLSLQRD 380
Score = 160 (61.4 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 35/146 (23%), Positives = 69/146 (47%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+V+GL+ + ++ S+ + ++ WD N ++ + H V + H + ++GG
Sbjct: 214 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGG 273
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +VW+ + + IF +L H + + P +++ S D TI+ W+ + +
Sbjct: 274 RDSVCRVWDIRTKMQIF-VLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMAT 332
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLD 156
+T H V HP ++ VSAS D
Sbjct: 333 ITNHKKTVRAMALHPKENDFVSASAD 358
Score = 141 (54.7 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 35/128 (27%), Positives = 64/128 (50%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRKKNVAP------GMGADDRQ 182
VL GH +V F P+++ + S D+TI++WD++ G+ K + G+ +R
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 183 IKLWRMNDSK---AWEVD---IFR---GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT 233
++ D K W+++ + R GH + V C+ HP +V+++ D R+WD+
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDI- 283
Query: 234 KRTCLNTF 241
RT + F
Sbjct: 284 -RTKMQIF 290
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 49/227 (21%), Positives = 100/227 (44%)
Query: 180 DRQIKLWRMNDSKA-WE-VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT---- 233
+R W + A W+ + +GH V V F P +E + + D++I++WD+
Sbjct: 145 ERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVL 204
Query: 234 KRTCLNTFRREQERFWSE---VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
K T + + S + S +DK ++ WD+ + + ++ + L HP
Sbjct: 205 KLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHP 264
Query: 291 TLNL-FAAGHDAGMVVFKFERERPAYTV-HNNVMYYVKERFLHRLDLTNSKDSVVM--QL 346
TL++ G D+ V+ + + + H++ ++ V R +T S DS + L
Sbjct: 265 TLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDL 324
Query: 347 RGGGRIPAHSISYNATEHSILVTTRNANNFENSTYD---LYMIPKEE 390
R G + A ++ T ++ + + N+F +++ D + +PK E
Sbjct: 325 RYGKSM-ATITNHKKTVRAMALHPKE-NDFVSASADNIKKFSLPKGE 369
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 151 (58.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 44/166 (26%), Positives = 75/166 (45%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
+ E S V ++F P ++ S + ++ WD T H V I +
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPD 167
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFH--HEYP---WILSASDDQT 116
SG + +I +W+ K + L GH +I + H P ++ S+S D +
Sbjct: 168 GKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGS 227
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+R+W+ + C +LTGH V C ++ D ++ SAS D+TI+VW
Sbjct: 228 VRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVW 272
Score = 141 (54.7 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 67 VSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
VSG DD+ + +W+ + +K + + GH I F + I SAS D++I++W+ ++
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTG 404
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
+ L GH V + ++VS S D T++VWD+ + PG AD+
Sbjct: 405 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGH-ADE 458
Score = 134 (52.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 44 LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 103
L + H+ + + F I S D IK+W+ + K + +L GH+ + +
Sbjct: 365 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 104 EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ ++S S D T+++W+ +++ L GH V + P V S D+ +R+W
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 33/119 (27%), Positives = 50/119 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L + A + + F P I S+ + I+LWD R L H V I +
Sbjct: 365 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ VSG D +KVW+ K +K L GH D + + + + S D+ +RIW
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 117 (46.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD + LW + K + GH ++ VLF P S +I S + DKSI+LWD
Sbjct: 347 GSDDFTLFLWSPAEDKK-PLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGK 405
Query: 237 CLNTFRRE----QERFWS---EVIVSNAEDKSIRLWDM 267
L + R + WS ++VS + D ++++WD+
Sbjct: 406 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Score = 108 (43.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 34/117 (29%), Positives = 55/117 (47%)
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD------ISGLRKKNVAP---GMGADDR 181
+TGH + F P I+ SAS D++I++WD ++ LR A AD R
Sbjct: 368 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 182 QIKLWRMNDS--KAWEVDIFR------GHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+ + +DS K W+V + GH + V V + P + + S +DK +R+W
Sbjct: 428 LL-VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 102 (41.0 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 35/134 (26%), Positives = 58/134 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICF---H-NQQPIF 66
V +S+ P + S NG I LWD + + H + + + H N + +
Sbjct: 159 VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRY 218
Query: 67 V-SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V S D ++VW+ +C L GH + + + + SAS D+TI++W
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGD-GLLYSASQDRTIKVWRAHD- 276
Query: 126 NCIC-VLTGHNHYV 138
+C L GH H+V
Sbjct: 277 GVLCRTLQGHGHWV 290
Score = 100 (40.3 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 108 ILSASDDQTIRIWN-WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
++S SDD T+ +W+ + + + +TGH + F P I+ SAS D++I++WD
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 400
Score = 98 (39.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+C +L GH + + + F ++ S S D T+R W+ + GH H+V+ +
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 164
Query: 144 HPTDDIVVSASLDQTIRVWDIS 165
P + S + I +WD S
Sbjct: 165 SPDGKKLASGCKNGQILLWDPS 186
Score = 97 (39.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 28/132 (21%), Positives = 53/132 (40%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F SG D ++ W+ FT GH ++ + + + +
Sbjct: 113 HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLA 172
Query: 110 SASDDQTIRIWNWQSRNCIC-VLTGHNHYVMCAQFHPTDD-----IVVSASLDQTIRVWD 163
S + I +W+ + + L GH+ ++ + P V S+S D ++RVWD
Sbjct: 173 SGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWD 232
Query: 164 ISGLRKKNVAPG 175
+ R + + G
Sbjct: 233 TTAGRCERILTG 244
Score = 90 (36.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKRTCL 238
D+ IKLW K + RGH V + + S ++VS + D ++++WD+ ++
Sbjct: 393 DKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAA 450
Query: 239 NTFRREQERF---WS---EVIVSNAEDKSIRLW 265
+ E + WS + + S +DK +R+W
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 76 (31.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 38/177 (21%), Positives = 69/177 (38%)
Query: 177 GADDRQIKLWRMNDSKAWEVD-IFRGHYNNVSCVLF---H--PKSEVIVSNAEDKSIRLW 230
G + QI LW + K +V GH ++ + + H P+ + S+++D S+R+W
Sbjct: 174 GCKNGQILLWDPSTGK--QVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW 231
Query: 231 DMTKRTCLNTFRREQERF----WSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
D T C + W ++ S ++D++I++W T + W
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGH--W 289
Query: 285 VLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHN--NVMYYVKERFLHRLDLTNSK 339
V N A D + FE + + + +KER L R +L +
Sbjct: 290 V-------NTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGR 339
Score = 67 (28.6 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 21/91 (23%), Positives = 36/91 (39%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
L +P+ ++ SS +G +++WD H V + + ++ S D
Sbjct: 210 LHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRT 268
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 105
IKVW TL GH ++ T +Y
Sbjct: 269 IKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 299
Score = 63 (27.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCV---------LFHPKSEVIVSNAEDKSIR 228
+ DR IK+WR +D GH+ N + F P +E V NA+D
Sbjct: 264 SQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEP-AEASV-NAQDLRGS 321
Query: 229 LWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLW 265
L ++ +R L+ + + R E +VS ++D ++ LW
Sbjct: 322 LQELKERA-LSRYNLVRGR-GLERLVSGSDDFTLFLW 356
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 180 (68.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 64/233 (27%), Positives = 108/233 (46%)
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+P S D IK+W+ R C +T+ GH + + + + + S S D+T+R+W+
Sbjct: 248 KPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQ-GLLYSGSHDRTVRVWDI 306
Query: 123 QSRN-CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR------------VWDISGLRK 169
S+ CI +L H H+V TD + + D T + + + + K
Sbjct: 307 NSQGRCINILKSHAHWVNHLSLS-TDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICK 365
Query: 170 KNV-APGM---GADDRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPKSEVIVSNAED 224
KN + M +DD + LW N K+ + + GH V+ V F P IVS + D
Sbjct: 366 KNGNSEEMMVTASDDYTMFLW--NPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFD 423
Query: 225 KSIRLWDMTKRTCLNTFRRE----QERFWSE---VIVSNAEDKSIRLWDMTKR 270
SI+LWD ++TFR + WS ++VS ++D ++++WD+ R
Sbjct: 424 NSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTR 476
Score = 156 (60.0 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 40/140 (28%), Positives = 69/140 (49%)
Query: 34 QLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLL-GH 92
++WD T + H V + + + +G D I++W+ K +C+ L GH
Sbjct: 169 RIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGH 228
Query: 93 LDYIRTTFFH--H-----EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHP 145
+I + + H P + S+S D TI+IW+ SR C ++GH + V C ++
Sbjct: 229 SKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGG 288
Query: 146 TDDIVVSASLDQTIRVWDIS 165
++ S S D+T+RVWDI+
Sbjct: 289 -QGLLYSGSHDRTVRVWDIN 307
Score = 149 (57.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 37/117 (31%), Positives = 59/117 (50%)
Query: 61 NQQPIFVSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
N + + V+ DDY + +WN K K I + GH + F + +I+SAS D +I++
Sbjct: 369 NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKL 428
Query: 120 WNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APG 175
W+ + I GH V + ++VS S D T++VWD+ RK +V PG
Sbjct: 429 WDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVR-TRKLSVDLPG 484
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 56/235 (23%), Positives = 105/235 (44%)
Query: 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNY 80
+P + SS +G I++WD H V + + Q ++ SG D ++VW+
Sbjct: 248 KPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLY-SGSHDRTVRVWDI 306
Query: 81 K-QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVM 139
Q +CI L H ++ +Y + A D + + + N+ +
Sbjct: 307 NSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKAL---ENYEKI 363
Query: 140 CAQFHPTDDIVVSASLDQTIRVWD----------ISGLRK--KNVA--PG----MGAD-D 180
C + +++++V+AS D T+ +W+ ++G +K +VA P + A D
Sbjct: 364 CKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFD 423
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
IKLW D K + FRGH +V V + ++VS ++D ++++WD+ R
Sbjct: 424 NSIKLWDGRDGKF--ISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTR 476
Score = 137 (53.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 34/114 (29%), Positives = 54/114 (47%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GA D ++W D++ + +GHYN V CV + P EVI + + D +IRLWD
Sbjct: 162 GAGDNTARIWDC-DTQT-PMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQ 219
Query: 237 CLNTFRREQERF-----WSEV----------IVSNAEDKSIRLWDMTKRTCLNT 275
CL R ++ W + + S+++D +I++WD R C T
Sbjct: 220 CLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYT 273
Score = 131 (51.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V ++F P +I+S+ + I+LWD R + F H V + + + + VS
Sbjct: 405 VNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSK 464
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
D +KVW+ + RK L GH D + T + + + S D+ +R+W
Sbjct: 465 DTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 32/129 (24%), Positives = 57/129 (44%)
Query: 35 LWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHL 93
LW+ +T + + H+ V + F VS D IK+W+ + K I T GH+
Sbjct: 385 LWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHV 444
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
+ + + ++S S D T+++W+ ++R L GH V + V S
Sbjct: 445 ASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSG 504
Query: 154 SLDQTIRVW 162
D+ +R+W
Sbjct: 505 GKDKMVRLW 513
Score = 126 (49.4 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 89 LLGHLDYIR-TTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTD 147
+ GH I + F H +++ + D T RIW+ ++ + L GH ++V+C + P
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG 198
Query: 148 DIVVSASLDQTIRVWD 163
+++ + S+D TIR+WD
Sbjct: 199 EVIATGSMDNTIRLWD 214
Score = 119 (46.9 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
V+G D ++W+ + + TL GH +++ + + I + S D TIR+W+ +S
Sbjct: 160 VTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQ 219
Query: 127 CIC-VLTGHNHYVMCAQFHPTDDI-------VVSASLDQTIRVWD 163
C+ L GH+ ++ + P + + S+S D TI++WD
Sbjct: 220 CLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD 264
Score = 112 (44.5 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKRTCL 238
D IKLW D K + FRGH +V V + ++VS ++D ++++WD+ T++ +
Sbjct: 423 DNSIKLWDGRDGKF--ISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSV 480
Query: 239 NTFRREQERF---WS---EVIVSNAEDKSIRLW 265
+ + E + WS + + S +DK +RLW
Sbjct: 481 DLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 59 (25.8 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 216 EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWDM 267
E++V+ ++D ++ LW+ K T ++ + V IVS + D SI+LWD
Sbjct: 372 EMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDG 431
Query: 268 TKRTCLNTFR 277
++TFR
Sbjct: 432 RDGKFISTFR 441
Score = 38 (18.4 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 10/23 (43%), Positives = 10/23 (43%)
Query: 835 VAKCRHVVWSPDMTHLALLSKHT 857
VA V WS D L SK T
Sbjct: 444 VASVYQVAWSSDCRLLVSCSKDT 466
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 216 (81.1 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 55/256 (21%), Positives = 115/256 (44%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + + F P + + + + LW R ++ H+ + + F
Sbjct: 14 FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGN 73
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ S D I++W +R H +R+ F + ++ SAS+D++I++WN
Sbjct: 74 LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYR 133
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMGADDRQI 183
+ + L H H+V CA+F P ++VS S D+TI++WD + + N + +G +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFAN--F 191
Query: 184 KLWRMNDS-----------KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
+ N + K W++ + ++ H V+CV FHP +++ + D +
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGT 251
Query: 227 IRLWDMTKRTCLNTFR 242
+++ D+ + + T +
Sbjct: 252 LKILDLLEGRLIYTLQ 267
Score = 207 (77.9 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 55/237 (23%), Positives = 100/237 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ + F P + S+ + I+LW +F H PVR + F S +
Sbjct: 63 ITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASE 122
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IKVWN +++ +++L H ++R F + I+S S+D+TI+IW+ ++ C+
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-------------SGLRKKNVAPG--- 175
+ + F+P + SA D T+++WDI G+ + P
Sbjct: 183 SDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 176 --MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+ D +K+ + + + + +GH V V F E+ S D + LW
Sbjct: 243 LITASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 40/163 (24%), Positives = 79/163 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHN 61
++F+ +A V+ + F ++ S+ + I++W+ YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ VS +D IK+W+ ++C+ + + F+ I SA D T++IW+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWD 214
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + H+ V C FHP+ + +++AS D T+++ D+
Sbjct: 215 IRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDL 257
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 49/213 (23%), Positives = 87/213 (40%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S + I++WD + F + G + F+ S G
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGS 206
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D+ +K+W+ + K + H + FH ++++AS D T++I + I L
Sbjct: 207 DHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTL 266
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW--DISGLRKKNVAPGMGADDRQIKLWRMN 189
GH V F ++ S D + +W + L K+V+ R +K R++
Sbjct: 267 QGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFDELNYKDVSK------RNLK--RLH 318
Query: 190 -DSKAWEVDIF----RGHYNNVSCVLFHPKSEV 217
DS +DI+ H + V +PK +V
Sbjct: 319 FDSPPHLLDIYPRTPHPHEGRIDTVEINPKLDV 351
Score = 149 (57.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ IK+W M + + ++R H + V C F P +IVS +EDK+I++WD T + C
Sbjct: 121 SEDKSIKVWNMYRQR-FLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
+N F + F + V I S D ++++WD+ L ++ + H
Sbjct: 179 VNNFS-DFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D + + R YT+ +
Sbjct: 238 PSGNYLITASSDGTLKILDLLEGRLIYTLQGH 269
Score = 143 (55.4 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
DR I+LW + D + + F+ H V V F + + S +EDKSI++W+M ++ L
Sbjct: 81 DRTIRLW-IPDKRGKSSE-FKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLY 138
Query: 240 TFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTF 276
+ R +F + +IVS +EDK+I++WD T + C+N F
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Score = 54 (24.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 54/218 (24%), Positives = 92/218 (42%)
Query: 719 ADHVI-LFDVQQKRALAQVKVAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVI-LF 776
+DH + ++D++ + L +V H V C F+ L+ +D + +
Sbjct: 206 SDHTVKIWDIRVNKLLQHYQV----H-----SGGVNCVS-FHPSGNYLITASSDGTLKIL 255
Query: 777 DVQQKRAL--AQVKVAKCRHVLYNKGEEIFYAGTGA----LLCR-EADHVILFDVQQKRA 829
D+ + R + Q V ++KG E+F +G GA LL R D + DV KR
Sbjct: 256 DLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSG-GADAQVLLWRTNFDELNYKDVS-KRN 313
Query: 830 LAQVKVAKCRHVV-WSPDMTHLALLSKHTLHICNRKMEGAGLMKSD--VINNID-SSLAA 885
L ++ H++ P H T+ I N K++ L S V++ + S
Sbjct: 314 LKRLHFDSPPHLLDIYPRTPHPHEGRIDTVEI-NPKLDVTDLQTSTPPVVDILSFDSTTT 372
Query: 886 TEVDVQGWGDDADLGNQV--YYLD-----RECSPHVLR 916
TE V+ D G ++ Y+L+ ECSP +L+
Sbjct: 373 TETTVRTLPDK---GEEICGYFLNPSLMSSECSPTILK 407
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 217 (81.4 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C VSG D IK+W+ +C L GH + + I++ S
Sbjct: 263 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--IITGSS 320
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L H V+ +F+ + ++V+ S D++I VWD++ + +
Sbjct: 321 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 378
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W N S V GH ++C+ + +
Sbjct: 379 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQY--R 434
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTK 269
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 435 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 494
Query: 270 RT---------CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F + PA
Sbjct: 495 ALDPRAPAGTLCLRTLVEHSGRVFRL-QFDEFQIVSSSHDDTILIWDFLND-PA 546
Score = 205 (77.2 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 72/255 (28%), Positives = 116/255 (45%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRG 56
L + +S KG L + ++ I+S L + I++WD NTL K H G V
Sbjct: 252 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWD--KNTLECKRILTGHTGSV-- 305
Query: 57 ICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
+C + + ++G D ++VW+ + + TL+ H + + F++ +++ S D++
Sbjct: 306 LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRS 363
Query: 117 IRIWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR----- 168
I +W+ S I VL GH V F D +VSAS D+TI+VW+ S
Sbjct: 364 IAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTL 421
Query: 169 ---KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEV 217
K+ +A G+ D I+LW + V GH V C+ F K
Sbjct: 422 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR-- 477
Query: 218 IVSNAEDKSIRLWDM 232
IVS A D I++WD+
Sbjct: 478 IVSGAYDGKIKVWDL 492
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 216 (81.1 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C VSG D IK+W+ +C L GH + + I++ S
Sbjct: 205 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSS 262
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L H V+ +F+ + ++V+ S D++I VWD++ + +
Sbjct: 263 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 320
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W N S V GH ++C+ + +
Sbjct: 321 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQY--R 376
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTK 269
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 377 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLIA 436
Query: 270 RT---------CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F + PA
Sbjct: 437 ALDPRAPAGTLCLRTLVEHSGRVFRL-QFDEFQIVSSSHDDTILIWDFLND-PA 488
Score = 201 (75.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 68/253 (26%), Positives = 112/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 194 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 249
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + ++G D ++VW+ + + TL+ H + + F++ +++ S D++I
Sbjct: 250 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 307
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW+ S
Sbjct: 308 VWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNG 365
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 366 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 421
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 422 SGAYDGKIKVWDL 434
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 216 (81.1 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C VSG D IK+W+ +C L GH + + I++ S
Sbjct: 205 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSS 262
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L H V+ +F+ + ++V+ S D++I VWD++ + +
Sbjct: 263 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 320
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W N S V GH ++C+ + +
Sbjct: 321 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQY--R 376
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTK 269
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 377 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMA 436
Query: 270 RT---------CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F + PA
Sbjct: 437 ALDPRAPAGTLCLRTLVEHSGRVFRL-QFDEFQIVSSSHDDTILIWDFLND-PA 488
Score = 201 (75.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 68/253 (26%), Positives = 112/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 194 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 249
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + ++G D ++VW+ + + TL+ H + + F++ +++ S D++I
Sbjct: 250 LQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 307
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW+ S
Sbjct: 308 VWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNG 365
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 366 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 421
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 422 SGAYDGKIKVWDL 434
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 217 (81.4 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C VSG D IK+W+ +C L GH + + I++ S
Sbjct: 268 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSS 325
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L H V+ +F+ + ++V+ S D++I VWD++ + +
Sbjct: 326 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 383
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W N S V GH ++C+ + +
Sbjct: 384 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQY--R 439
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTK 269
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 440 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 499
Query: 270 RT---------CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F + PA
Sbjct: 500 ALDPRAPAGTLCLRTLVEHSGRVFRL-QFDEFQIVSSSHDDTILIWDFLND-PA 551
Score = 201 (75.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 68/253 (26%), Positives = 112/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 257 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 312
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + ++G D ++VW+ + + TL+ H + + F++ +++ S D++I
Sbjct: 313 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 370
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW+ S
Sbjct: 371 VWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNG 428
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 429 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 484
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 485 SGAYDGKIKVWDL 497
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 208 (78.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 54/244 (22%), Positives = 112/244 (45%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +A + LSF+P+ + + + +LWD + + H + + F+
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGD 232
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
++G D+ + VW+ + + L+GH I + F+ + IL+ S D+T ++W+ +
Sbjct: 233 RIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATN 292
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIK 184
C+ LTGH+ ++ + F T ++ +AS D T R++ S +K +A G + K
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF--SAATRKCIAKLEGHEGEISK 350
Query: 185 ----------LWRMNDSKA--WE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
L +D A W+ + + GH + + F+ K ++++ ++D +
Sbjct: 351 ISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNT 410
Query: 227 IRLW 230
R+W
Sbjct: 411 CRIW 414
Score = 190 (71.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 54/255 (21%), Positives = 110/255 (43%)
Query: 34 QLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHL 93
+LW F H + + F+ Q + +G D K+W+ + + ++TL GH
Sbjct: 160 KLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHS 219
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
I + F+ I++ S D T+ +W+ + + +L GH + A F+ ++++
Sbjct: 220 AEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTG 279
Query: 154 SLDQTIRVWDISGLRKKNVAPGMGAD------DRQIKLWRMND--------SKAWEVDIF 199
S+D+T ++WD + + G + D KL S A I
Sbjct: 280 SMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIA 339
Query: 200 R--GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS------- 250
+ GH +S + F+P+ +++ + DK+ R+WD CL + +S
Sbjct: 340 KLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKG 399
Query: 251 EVIVSNAEDKSIRLW 265
++++ ++D + R+W
Sbjct: 400 NIVITGSKDNTCRIW 414
Score = 187 (70.9 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 55/231 (23%), Positives = 99/231 (42%)
Query: 25 LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD-DYKIKVWNYKQR 83
++ ++ +LWD L + H V I F+N ++ G D K+W+ +
Sbjct: 108 ITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
KC T GH I F+ + + + S D T ++W+ Q+ + L GH+ ++ F
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
Query: 144 HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGAD--------DRQIKLWRMNDS--KA 193
+ + D +++ S D T+ VWD RK N+ G A+ D + L D K
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKL 287
Query: 194 WE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
W+ V GH + + F ++I + + D + R++ R C+
Sbjct: 288 WDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCI 338
Score = 164 (62.8 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
L + H P+ + + F++G D K+W+ + + TL GH + + F+
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 103 HEY-PWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 161
+ Y I + S D+T ++W+ ++ C GH ++C F+P +V + S+D T ++
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 162 WDI 164
WDI
Sbjct: 204 WDI 206
Score = 99 (39.9 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 27/106 (25%), Positives = 49/106 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D KLW + + + EV RGH + + F+ + I++ + D ++ +WD
Sbjct: 195 GSMDTTAKLWDIQNGE--EVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGR 252
Query: 237 CLNTF-----RREQERF-WS-EVIVSNAEDKSIRLWDMTKRTCLNT 275
+N F W +I++ + DK+ +LWD T C+ T
Sbjct: 253 KVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVAT 298
Score = 78 (32.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 23/105 (21%), Positives = 45/105 (42%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ KLW + K V GH + + F ++I + + D + R++ R
Sbjct: 279 GSMDKTCKLWDATNGKC--VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRK 336
Query: 237 CLNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCL 273
C+ + S++ +++ + DK+ R+WD CL
Sbjct: 337 CIAKLEGHEGEI-SKISFNPQGNHLLTGSSDKTARIWDAQTGQCL 380
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 217 (81.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C VSG D IK+W+ +C L GH + + I++ S
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--IITGSS 361
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L H V+ +F+ + ++V+ S D++I VWD++ + +
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 419
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W N S V GH ++C+ + +
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQY--R 475
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTK 269
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 535
Query: 270 RT---------CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F + PA
Sbjct: 536 ALDPRAPAGTLCLRTLVEHSGRVFRL-QFDEFQIVSSSHDDTILIWDFLND-PA 587
Score = 205 (77.2 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 72/255 (28%), Positives = 116/255 (45%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRG 56
L + +S KG L + ++ I+S L + I++WD NTL K H G V
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWD--KNTLECKRILTGHTGSV-- 346
Query: 57 ICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
+C + + ++G D ++VW+ + + TL+ H + + F++ +++ S D++
Sbjct: 347 LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRS 404
Query: 117 IRIWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR----- 168
I +W+ S I VL GH V F D +VSAS D+TI+VW+ S
Sbjct: 405 IAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 169 ---KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEV 217
K+ +A G+ D I+LW + V GH V C+ F K
Sbjct: 463 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR-- 518
Query: 218 IVSNAEDKSIRLWDM 232
IVS A D I++WD+
Sbjct: 519 IVSGAYDGKIKVWDL 533
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 217 (81.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C VSG D IK+W+ +C L GH + + I++ S
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--IITGSS 361
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L H V+ +F+ + ++V+ S D++I VWD++ + +
Sbjct: 362 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 419
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W N S V GH ++C+ + +
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQY--R 475
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTK 269
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 535
Query: 270 RT---------CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F + PA
Sbjct: 536 ALDPRAPAGTLCLRTLVEHSGRVFRL-QFDEFQIVSSSHDDTILIWDFLND-PA 587
Score = 205 (77.2 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 72/255 (28%), Positives = 116/255 (45%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRG 56
L + +S KG L + ++ I+S L + I++WD NTL K H G V
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWD--KNTLECKRILTGHTGSV-- 346
Query: 57 ICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
+C + + ++G D ++VW+ + + TL+ H + + F++ +++ S D++
Sbjct: 347 LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRS 404
Query: 117 IRIWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR----- 168
I +W+ S I VL GH V F D +VSAS D+TI+VW+ S
Sbjct: 405 IAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 169 ---KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEV 217
K+ +A G+ D I+LW + V GH V C+ F K
Sbjct: 463 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR-- 518
Query: 218 IVSNAEDKSIRLWDM 232
IVS A D I++WD+
Sbjct: 519 IVSGAYDGKIKVWDL 533
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 217 (81.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C VSG D IK+W+ +C L GH + + I++ S
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSS 361
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L H V+ +F+ + ++V+ S D++I VWD++ + +
Sbjct: 362 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 419
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W N S V GH ++C+ + +
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQY--R 475
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTK 269
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 535
Query: 270 RT---------CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F + PA
Sbjct: 536 ALDPRAPAGTLCLRTLVEHSGRVFRL-QFDEFQIVSSSHDDTILIWDFLND-PA 587
Score = 201 (75.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 68/253 (26%), Positives = 112/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 348
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + ++G D ++VW+ + + TL+ H + + F++ +++ S D++I
Sbjct: 349 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 406
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW+ S
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 465 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 520
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 521 SGAYDGKIKVWDL 533
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 217 (81.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 75/295 (25%), Positives = 129/295 (43%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C VSG D IK+W+ +C L GH + + I++ S
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSS 361
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L H V+ +F+ + ++V+ S D++I VWD++ + +
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 419
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W N S V GH ++C+ + +
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQY--R 475
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTK 269
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMA 535
Query: 270 RT---------CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAY 315
CL T R + L + ++ HD ++++ F + A+
Sbjct: 536 ALDPRAPAGTLCLRTLVEHSGRVFRL-QFDEFQIVSSSHDDTILIWDFLNDPAAH 589
Score = 201 (75.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 68/253 (26%), Positives = 112/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 348
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + ++G D ++VW+ + + TL+ H + + F++ +++ S D++I
Sbjct: 349 LQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 406
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW+ S
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 465 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 520
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 521 SGAYDGKIKVWDL 533
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 239 (89.2 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 67/259 (25%), Positives = 114/259 (44%)
Query: 5 FETKSARVKGLSF-HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
FE V +SF H R + S+ G +++WD R +L + H+ V + F
Sbjct: 385 FEDHEDSVMAVSFAHDSRR-LASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS 443
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ S DD +K+W+ TL GH D++R+ F H+ I SASDD T++IW+
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG------ 177
+ L H+++V F ++ SAS D T+++WD + +N G
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSV 563
Query: 178 --ADDRQIKLWRMNDS--KAWEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSI 227
+ D ++ +D K W F G + F S ++ S +D ++
Sbjct: 564 SFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTV 623
Query: 228 RLWDMTKRTCLNTFRREQE 246
++WDM + +TF + E
Sbjct: 624 KIWDMEIYSLRHTFDLDHE 642
Score = 238 (88.8 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 62/247 (25%), Positives = 115/247 (46%)
Query: 12 VKGLSF-HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
V+ + F H R I S ++ +++W+ L F++HE V + F + S
Sbjct: 350 VRSVVFSHDSR-LIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASAS 408
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +K+W+ + L GH D + + F + + SASDD+T++IW+ + +
Sbjct: 409 DGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRT 468
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN--------VAPGMGADDRQ 182
L GHN +V F ++ SAS D T+++WD + + +N V + + D +
Sbjct: 469 LEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSR 528
Query: 183 IKLWRMNDS--KAWEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
+ +D K W+ + GH + V+ V F P S ++ S ++D ++++W
Sbjct: 529 LLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAAT 588
Query: 235 RTCLNTF 241
T +TF
Sbjct: 589 GTVQHTF 595
Score = 227 (85.0 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 64/253 (25%), Positives = 113/253 (44%)
Query: 12 VKGLSF-HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
VK + F H R + S+ +G +++WD TL H VR + F + + SG
Sbjct: 308 VKSVVFSHDSR-LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGS 366
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
+D +++W T H D + F H+ + SASD ++IW+ ++ + V
Sbjct: 367 NDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNV 426
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-G-----LRKKN--VAPGMGADDRQ 182
L GH+ V F P ++ SAS D+T+++W + G L N V + + D +
Sbjct: 427 LEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSR 486
Query: 183 IKLWRMNDS--KAWEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
+ +D K W+ + H N V V+F S ++ S ++D ++++WD
Sbjct: 487 LIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTAT 546
Query: 235 RTCLNTFRREQER 247
+ NT +R
Sbjct: 547 GSLENTLEGHDDR 559
Score = 224 (83.9 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 58/256 (22%), Positives = 116/256 (45%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
W +S + +Q++ + +F H+ V + F + + S D +K+W+
Sbjct: 235 WNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTAT 294
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
TL GH +++++ F H+ + SASDD T++IW+ + +L GHN V
Sbjct: 295 SFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVV 354
Query: 143 FHPTDDIVVSASLDQTIRVWDIS-GLRKKN--------VAPGMGADDRQIKLWRMNDS-K 192
F ++ S S D+T+R+W+ + GL + +A D R++ + K
Sbjct: 355 FSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVK 414
Query: 193 AWEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 246
W+ ++ GH + V+ V F P S ++ S ++D+++++W + T +
Sbjct: 415 IWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHND 474
Query: 247 RFWSEVIVSNAEDKSI 262
W +V + + + I
Sbjct: 475 --WVRSVVFSHDSRLI 488
Score = 207 (77.9 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 65/274 (23%), Positives = 112/274 (40%)
Query: 4 KFETKSARVKGLSF-HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
+F+ V +SF H R + S+ +G +++WD + L + H V+ + F +
Sbjct: 258 QFKGHDRAVGSVSFSHDSR-LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHD 316
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ S DD +K+W+ L GH D +R+ F H+ I S S+D+T+RIW
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWET 376
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG----- 177
+ H VM F + SAS +++WD +NV G
Sbjct: 377 TTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNS 436
Query: 178 ---ADDRQIKLWRMNDS--KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
+ D ++ +D K W GH + V V+F S +I S ++D +
Sbjct: 437 VSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMT 496
Query: 227 IRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDK 260
+++WD N E W +V + + +
Sbjct: 497 VKIWDTATVPLQNNL--ESHDNWVRSVVFSHDSR 528
Score = 159 (61.0 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 60/250 (24%), Positives = 103/250 (41%)
Query: 71 DDYKIKVWNYKQRKC----IFT--LL-------GHLDYIRTTFFHHEYPWILSASDDQTI 117
D Y+ +WN KC ++ LL GH + + F H+ + SAS D T+
Sbjct: 228 DSYRFALWNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTV 287
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG 177
+IW+ + L GHN +V F ++ SAS D T+++WD A G
Sbjct: 288 KIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWD--------TATGT- 338
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
L RM +GH ++V V+F S +I S + D+++R+W+ T
Sbjct: 339 -------LQRM----------LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLL 381
Query: 238 LNTFRREQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
+TF ++ S + S ++ ++++WD + N + + P
Sbjct: 382 RHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP 441
Query: 291 TLNLFAAGHD 300
L A+ D
Sbjct: 442 DSRLLASASD 451
Score = 46 (21.3 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 9/40 (22%), Positives = 21/40 (52%)
Query: 482 LEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQRTKNFD 521
LE + + ++WE + H A + G +++ ++ N+D
Sbjct: 834 LERSDLRNQDNIWETMAHEAAVNGYELLLDKLVKQP-NWD 872
Score = 39 (18.8 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 327 ERFLHRLDLTNSKDSVVMQLRGGGRIPAHSI-SYNATEHSILVTTRNAN 374
E+ L RLD + K + + ++ H+ +YNA H + + ++AN
Sbjct: 1572 EKIL-RLDNSRPKRILEQYMADVKKMDEHAKDTYNALNHLLDLKQKHAN 1619
Score = 38 (18.4 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 958 GYPEVALHFVKDDRTRLTLALECGNIPPHRSYS-GR 992
G+ +V +HF+ ++ ++ + G +P H + + GR
Sbjct: 926 GHDDV-VHFLLENGAKVDEGDKAGRVPLHEAAAHGR 960
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/160 (23%), Positives = 72/160 (45%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL-LEKFDEHEGPVRGICFHNQ 62
K + + +V+G P+R ++S + + LW + LE+ H+ + + F
Sbjct: 341 KAQQRYDKVRGQG--PER--LVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPD 396
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
I S D IK+W + K + +L GH+ + + + ++S S D T+++W+
Sbjct: 397 TRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDA 456
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+++ L GH V + P V S D+ +R+W
Sbjct: 457 ETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 141 (54.7 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 45/166 (27%), Positives = 74/166 (44%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
+ E + V ++F P ++ S + ++ WD T H V I +
Sbjct: 121 SSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPD 180
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFH--HEYP---WILSASDDQT 116
SG + +I +W+ I +L GH +I + H P ++ SAS D +
Sbjct: 181 GKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGS 240
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
IRIW+ C +LTGH V C ++ D ++ S+S D+TI+VW
Sbjct: 241 IRIWDTLMGRCDKILTGHTQSVTCVKWGG-DGLLYSSSQDRTIKVW 285
Score = 132 (51.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 41/140 (29%), Positives = 65/140 (46%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPI-FVSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTF 100
L +K + VRG Q P VSG DD+ + +W + +K + + GH I
Sbjct: 338 LKDKAQQRYDKVRG-----QGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVL 392
Query: 101 FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 160
F + I SAS D++I++W ++ + L GH V + ++VS S D T++
Sbjct: 393 FSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLK 452
Query: 161 VWDISGLRKKNVAPGMGADD 180
VWD + PG AD+
Sbjct: 453 VWDAETKKLAIDLPGH-ADE 471
Score = 125 (49.1 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 32/106 (30%), Positives = 55/106 (51%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD + LWR + K ++ GH ++ VLF P + +I S + DKSI+LW+
Sbjct: 360 GSDDFTLFLWRPAEDKK-PLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGK 418
Query: 237 CLNTFRREQERF----WS---EVIVSNAEDKSIRLWDM-TKRTCLN 274
L + R WS ++VS + D ++++WD TK+ ++
Sbjct: 419 YLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAID 464
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 32/119 (26%), Positives = 51/119 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L + A + + F P I S+ + I+LW+ R L H V I +
Sbjct: 378 LERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSA 437
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ VSG D +KVW+ + +K L GH D + T + + + S D+ +RIW
Sbjct: 438 DSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 110 (43.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 4 KFETKSAR--VKGLSFHPKRPWILSSLHNGVIQLWDYRM-NTLLEKFDEHEGPVRGICF- 59
+F K R V +++ P + S N I LWD N + H + +C+
Sbjct: 162 QFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWE 221
Query: 60 --H-NQQPIFV-SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 115
H N + ++ S D I++W+ +C L GH + + + + S+S D+
Sbjct: 222 PLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGD-GLLYSSSQDR 280
Query: 116 TIRIWNWQSRNCIC-VLTGHNHYVMCAQFHPTDDIVVSASLDQ---TIRVWDISG 166
TI++W Q +C L GH H+V TD ++ + + + TI D+SG
Sbjct: 281 TIKVWRSQD-GILCRTLQGHAHWVNTMALS-TDYVLRTGAFEPAEATINPQDMSG 333
Score = 109 (43.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKRTCL 238
D+ IKLW K + RGH + V + + S ++VS + D ++++WD TK+ +
Sbjct: 406 DKSIKLWEGRTGKY--LTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAI 463
Query: 239 NTFRREQERF---WS---EVIVSNAEDKSIRLW 265
+ E F WS + + S +DK +R+W
Sbjct: 464 DLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 98 (39.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+C +L GH + + + F ++ S S D T+R W+ + GH H+V+ +
Sbjct: 118 RCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAW 177
Query: 144 HPTDDIVVSASLDQTIRVWD 163
P + S + I +WD
Sbjct: 178 SPDGKKLASGCKNSQIFLWD 197
Score = 82 (33.9 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
C L GH V+ F PT + S S D T+R WD+S
Sbjct: 119 CTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLS 157
Score = 76 (31.8 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 23/101 (22%), Positives = 48/101 (47%)
Query: 177 GADDRQIKLWRMNDSKAWEVD-IFRGHYNNVSCVLF---H--PKSEVIVSNAEDKSIRLW 230
G + QI LW + + ++ + GH ++C+ + H P+ + S ++D SIR+W
Sbjct: 187 GCKNSQIFLW--DPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIW 244
Query: 231 DMTKRTCLNTFRREQERF----WSE--VIVSNAEDKSIRLW 265
D C + W ++ S+++D++I++W
Sbjct: 245 DTLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVW 285
Score = 47 (21.6 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 473 LECGNIDIALEAARVLEDKSVWERL-GHAALM 503
L G+ D L R EDK ER+ GH AL+
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKPLERMTGHQALI 388
Score = 46 (21.3 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 25/97 (25%), Positives = 40/97 (41%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSC-----VL----FHPKSEVIVSNAEDKSIR 228
+ DR IK+WR D H+ N VL F P I N +D S
Sbjct: 277 SQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATI--NPQDMSGS 334
Query: 229 LWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLW 265
L ++ K + + + + E +VS ++D ++ LW
Sbjct: 335 LAEL-KDKAQQRYDKVRGQ-GPERLVSGSDDFTLFLW 369
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 216 (81.1 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 55 RGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+G+ C VSG D IK+W+ +C L GH + + I++ S
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSS 361
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKK 170
D T+R+W+ + + L H V+ +F+ + ++V+ S D++I VWD++ + +
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 419
Query: 171 NVAPGMGA-----D-----------DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
V G A D DR IK+W N S V GH ++C+ + +
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQY--R 475
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWSEVIVSNAEDKSIRLWDMTK 269
++VS + D +IRLWD+ CL +E RF ++ IVS A D I++WD+
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMA 535
Query: 270 RT---------CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPA 314
CL T R + L + ++ HD ++++ F + PA
Sbjct: 536 ALDPRAPAGTLCLRTLVEHSGRVFRL-QFDEFQIVSSSHDDTILIWDFLND-PA 587
Score = 201 (75.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 68/253 (26%), Positives = 112/253 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 348
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
+ + ++G D ++VW+ + + TL+ H + + F++ +++ S D++I
Sbjct: 349 LQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 406
Query: 119 IWNWQSRNCIC---VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR------- 168
+W+ S I VL GH V F D +VSAS D+TI+VW+ S
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 169 -KKNVA--------PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIV 219
K+ +A G+ D I+LW + V GH V C+ F K IV
Sbjct: 465 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR--IV 520
Query: 220 SNAEDKSIRLWDM 232
S A D I++WD+
Sbjct: 521 SGAYDGKIKVWDL 533
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 213 (80.0 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 59/250 (23%), Positives = 105/250 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + P W S + +I++WD L H VR + + P SGG+
Sbjct: 187 VRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGE 246
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ + K I GHL ++ H +++ + D T R+W+ +++ +
Sbjct: 247 DKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCF 306
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLW-RMN- 189
GH + V D V++AS D T+R+WD++ R R + + R+N
Sbjct: 307 AGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNM 366
Query: 190 ------DS-KAWEV------DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
D+ K W++ GH N + L V+VS A++ S+ WD
Sbjct: 367 FASASPDNIKQWKLPKGEFMQNLSGH-NAIINTLSSNDDGVVVSGADNGSLCFWDWRSGF 425
Query: 237 CLNTFRREQE 246
C + + +
Sbjct: 426 CFQKIQTKPQ 435
Score = 180 (68.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 51/202 (25%), Positives = 90/202 (44%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR + F SGG D IK+W+ + +L GH+ +R +P++
Sbjct: 183 HTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLF 242
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S +D+ ++ W+ + I GH V HP+ D++V+ + D T RVWD+ +
Sbjct: 243 SGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQ 302
Query: 170 KNVAPGMG---AD------DRQIKLWRMNDS--KAWEVDIFRG------HYNNVSCVLFH 212
+ G AD D Q+ + +D+ + W++ R H +V + H
Sbjct: 303 VHCFAGHTNTVADVVCQSVDPQV-ITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIH 361
Query: 213 PKSEVIVSNAEDKSIRLWDMTK 234
P+ + S + D +I+ W + K
Sbjct: 362 PRLNMFASASPD-NIKQWKLPK 382
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 164 ISGLRKKNVAPG-----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
IS +R V+P G +D+Q+K W + +K + + GH + V + HP +V+
Sbjct: 226 ISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKV--IRHYHGHLSAVQALSVHPSLDVL 283
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV-------IVSNAEDKSIRLWDMTKRT 271
V+ A D + R+WDM + ++ F V +++ + D ++RLWD+
Sbjct: 284 VTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGR 343
Query: 272 CLNTFRREQERFWVLVAHPTLNLFAA 297
+ T ++ L HP LN+FA+
Sbjct: 344 SMCTLTHHKKSVRALTIHPRLNMFAS 369
Score = 130 (50.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 38/161 (23%), Positives = 67/161 (41%)
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
GH ++R W S D+ I+IW+ S LTGH V + P +
Sbjct: 182 GHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFL 241
Query: 151 VSASLDQTIRVWDI-------------SGLRKKNVAPGMGADDRQIKLWRMNDSKAWE-- 195
S D+ ++ WD+ S ++ +V P + D + R + ++ W+
Sbjct: 242 FSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSL---DVLVTCARDSTARVWDMR 298
Query: 196 ----VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
V F GH N V+ V+ +++ + D ++RLWD+
Sbjct: 299 TKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDL 339
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 48/225 (21%), Positives = 98/225 (43%)
Query: 167 LRKKNVAPG-----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
+R +V PG G DR IK+W + + ++ + GH ++V V P+ + S
Sbjct: 187 VRAVDVEPGNQWFASGGADRIIKIWDLASGQL-KLSL-TGHISSVRAVKVSPRHPFLFSG 244
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLN 274
EDK ++ WD+ + + + +V+V+ A D + R+WDM + ++
Sbjct: 245 GEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVH 304
Query: 275 TFRREQERFWVLVAHPT-LNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLH-R 332
F +V + A HDA + ++ R T+ ++ V+ +H R
Sbjct: 305 CFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKS-VRALTIHPR 363
Query: 333 LDL--TNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANN 375
L++ + S D++ ++P N + H+ ++ T ++N+
Sbjct: 364 LNMFASASPDNIKQW-----KLPKGEFMQNLSGHNAIINTLSSND 403
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 171 (65.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 40/132 (30%), Positives = 74/132 (56%)
Query: 37 DYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH-L 93
+Y + TL EK + H V I F++ + VSGGDD +++W+ +RKC+ TL GH
Sbjct: 32 NYAIETL-EKTELHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYGHST 90
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTD-DIVVS 152
+ T F +++ ++S +D IR ++ +++ C V H+ V+ PT + +S
Sbjct: 91 NVFATNFLNNDNRKVISGGNDADIRYYDIENQKCT-VYKHHSKKVLKLSVCPTQPQVFLS 149
Query: 153 ASLDQTIRVWDI 164
+S D ++R++D+
Sbjct: 150 SSSDGSVRLFDV 161
Score = 98 (39.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 156 DQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKS 215
+QTI+ + G + + G +DD ++ +W +K V I GH ++V+ V+ HP
Sbjct: 779 EQTIKSVNFYGPNSEYIVSG--SDDSKLFIWDKESAKI--VRILEGHDSHVNSVVCHPNE 834
Query: 216 EVIVSNAEDKSIRLWDMTK 234
I ++ D I LW+ TK
Sbjct: 835 PCIATSGIDPYICLWEPTK 853
Score = 59 (25.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 17/68 (25%), Positives = 29/68 (42%)
Query: 250 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA-AGHDAGMVVFKF 308
SE IVS ++D + +WD + +V HP A +G D + +++
Sbjct: 792 SEYIVSGSDDSKLFIWDKESAKIVRILEGHDSHVNSVVCHPNEPCIATSGIDPYICLWEP 851
Query: 309 ERERPAYT 316
+E P T
Sbjct: 852 TKEYPDET 859
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 77/331 (23%), Positives = 142/331 (42%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T + + V + + W++S +G+I++W + + E H +R + F +
Sbjct: 129 TLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTESIRDMAFSSN 188
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
FV+ DD +K+WN+ K L GH +++ +H E I SAS D +++W+
Sbjct: 189 DSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDP 248
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+S NCI + H V+ +F PT +++++ S D++ RV+DI K+ + D
Sbjct: 249 RSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMCVRDETDYM 308
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRL--WDMTKRTCLN 239
++ +N+S + + + G + + + + + A DK I ++
Sbjct: 309 TLEWHPINESM-FTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFAT 367
Query: 240 TFRREQERFWSEV--IVSNAED------KSIRLWDMTKRTCLNTFRREQERFWVLVAHP- 290
+ RFW+ I NA D K I W +N R + E F P
Sbjct: 368 AAKDRTIRFWTRARPIDPNAYDDPTYNNKKINGWFFGINNDINAVREKSE-FGAAPPPPA 426
Query: 291 TLNLFAAGHDAGMVVFKFERERPAYTVHNNV 321
TL A + G + K +E P + +N+
Sbjct: 427 TLEPHALPNMNGFINKKPRQEIPG--IDSNI 455
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/154 (25%), Positives = 71/154 (46%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ + + P+ ++ + ++G LW+ T H+ V + + + +SG
Sbjct: 96 IPAIQWTPEGRRLVVATYSGEFSLWNASSFTFETLMQAHDSAVTTMKYSHDSDWMISGDA 155
Query: 72 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
D IK+W N+ K I H + IR F ++ SDD ++IWN+ +
Sbjct: 156 DGMIKIWQPNFSMVKEIDA--AHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQER 213
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
VL+GH+ V +HP ++ SAS D +++WD
Sbjct: 214 VLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWD 247
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 146 (56.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 44/166 (26%), Positives = 75/166 (45%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
+ E S V ++F P ++ S + ++ WD T H V I +
Sbjct: 110 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 169
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFH--HEYP---WILSASDDQT 116
SG + +I +W+ + TL GH +I + H P ++ S+S D +
Sbjct: 170 GKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGS 229
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+R+W+ + C +LTGH V C ++ D ++ SAS D+TI+VW
Sbjct: 230 VRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVW 274
Score = 142 (55.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 67 VSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
VSG DD+ + +W+ + +K + + GH I F + + SAS D++I++W+ ++
Sbjct: 347 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 406
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
+ L GH V + ++VS S D T++VWD+ + PG AD+
Sbjct: 407 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGH-ADE 460
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 33/145 (22%), Positives = 65/145 (44%)
Query: 19 PKRPWILSSLHNGVIQLWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKV 77
P+R ++S + + LW + L + H+ + + F I S D IK+
Sbjct: 343 PER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKL 400
Query: 78 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHY 137
W+ + K + +L GH+ + + + ++S S D T+++W+ +++ L GH
Sbjct: 401 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADE 460
Query: 138 VMCAQFHPTDDIVVSASLDQTIRVW 162
V + P V S D+ +R+W
Sbjct: 461 VYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 32/119 (26%), Positives = 50/119 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L + A + + F P + S+ + I+LWD R L H V I +
Sbjct: 367 LARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 426
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ VSG D +KVW+ K +K L GH D + + + + S D+ +RIW
Sbjct: 427 DSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 118 (46.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 46/178 (25%), Positives = 76/178 (42%)
Query: 5 FETKSAR--VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICF-- 59
F K R V +S+ P + S NG I LWD T + + H + G+ +
Sbjct: 152 FTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEP 211
Query: 60 -H-NQQPIFV-SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
H N + +V S D ++VW+ +C L GH + + + + SAS D+T
Sbjct: 212 LHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGD-GLLYSASQDRT 270
Query: 117 IRIWNWQSRNCIC-VLTGHNHYVMCAQFHPTDDIVVSASLDQ---TIRVWDISGLRKK 170
I++W +C L GH H+V TD + + + + T+ D+ G K+
Sbjct: 271 IKVWRAHD-GVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEATVNAQDLQGSLKE 326
Score = 116 (45.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD + LW + K + GH ++ VLF P S ++ S + DKSI+LWD
Sbjct: 349 GSDDFTLFLWSPAEDKK-PLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 407
Query: 237 CLNTFRRE----QERFWS---EVIVSNAEDKSIRLWDM 267
L + R + WS ++VS + D ++++WD+
Sbjct: 408 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 445
Score = 99 (39.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 29/132 (21%), Positives = 54/132 (40%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F SG D ++ W+ FT GH ++ + + + +
Sbjct: 115 HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA 174
Query: 110 SASDDQTIRIWNWQSRNCIC-VLTGHNHYVMCAQFHPTD-----DIVVSASLDQTIRVWD 163
S + I +W+ + + LTGH+ ++ + P V S+S D ++RVWD
Sbjct: 175 SGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWD 234
Query: 164 ISGLRKKNVAPG 175
+ R + + G
Sbjct: 235 TTAGRCERILTG 246
Score = 98 (39.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+C +L GH + + + F ++ S S D T+R W+ + GH H+V+ +
Sbjct: 107 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 166
Query: 144 HPTDDIVVSASLDQTIRVWDIS 165
P + S + I +WD S
Sbjct: 167 SPDGKKLASGCKNGQILLWDPS 188
Score = 89 (36.4 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ IKLW K + RGH V + + S ++VS + D ++++WD+ +
Sbjct: 395 DKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTT 452
Query: 240 TFRREQERF----WS---EVIVSNAEDKSIRLW 265
+ WS + + S +DK +R+W
Sbjct: 453 DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 73 (30.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 177 GADDRQIKLWRMNDSKAWEVD-IFRGH---YNNVSCVLFH--PKSEVIVSNAEDKSIRLW 230
G + QI LW + S +V GH +S H P+ + S+++D S+R+W
Sbjct: 176 GCKNGQILLW--DPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW 233
Query: 231 DMTKRTCLNTFRREQERF----WSE--VIVSNAEDKSIRLW 265
D T C + W ++ S ++D++I++W
Sbjct: 234 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW 274
Score = 57 (25.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/99 (27%), Positives = 43/99 (43%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCV---------LFHPKSEVIVSNAEDKSIR 228
+ DR IK+WR +D GH+ N + F P +E V NA+D
Sbjct: 266 SQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEP-AEATV-NAQDLQGS 323
Query: 229 LWDMTKRTC--LNTFRREQERFWSEVIVSNAEDKSIRLW 265
L ++ +R N R + E +VS ++D ++ LW
Sbjct: 324 LKELKERASSRYNLVRGQGP----ERLVSGSDDFTLFLW 358
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 178 (67.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 58/255 (22%), Positives = 107/255 (41%)
Query: 65 IFVSGGDDYKIKVWNY-KQRK--CIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIW 120
+FVS D I+VW K + C+ LGH + + +++++S D TI++W
Sbjct: 400 MFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVW 459
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
N LT + + + D+ I +S K +A G + D
Sbjct: 460 NIPES-----LTSKAKAALISGPETLHAQMTERGHDKDINSVAVSP-NDKLIATG--SQD 511
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
R KLW D + +F GH + CV F P +++ +++ D +++LW + +CL T
Sbjct: 512 RLAKLWSCPDCSL--LGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKT 569
Query: 241 FRREQERFWSEVIVSNA-------EDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLN 293
F + VS D ++LW + C+ T +++ W L + +
Sbjct: 570 FEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDD 629
Query: 294 LFA-AGHDAGMVVFK 307
+ A D+ + ++K
Sbjct: 630 MVVTASSDSSITLWK 644
Score = 168 (64.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 32 VIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLL 90
+++ W++R N + + H PV + F + + +GG D IK+W+ ++ C L
Sbjct: 90 LLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLK 149
Query: 91 GHLDYIRTTFFHHEYP--WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDD 148
G + FH + + S+S D IRIW+ S C+ VL GH V F +
Sbjct: 150 GSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGN 209
Query: 149 IVVSASLDQTIRVWDI 164
++S+ D+ VW++
Sbjct: 210 TLISSGRDKICMVWNL 225
Score = 162 (62.1 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 62/288 (21%), Positives = 123/288 (42%)
Query: 74 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW-QSRNCICVLT 132
++KV+ C L GH + I + +S + D++IR+W + +CV
Sbjct: 368 QLKVFELSTSHCQI-LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQ 426
Query: 133 G--HNH---YVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGADDRQIKLW 186
G H H V C++ + VV++S D TI+VW+I L K A + +
Sbjct: 427 GLGHAHGVGAVSCSRLK--ESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHA-- 482
Query: 187 RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 246
+M + RGH +++ V P ++I + ++D+ +LW + L F +
Sbjct: 483 QMTE---------RGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKR 533
Query: 247 RFW-------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW--VLVAHPTLNLFAA 297
W +++ +++ D +++LW + +CL TF + V+ T L +
Sbjct: 534 GIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGT-QLLSG 592
Query: 298 GHDAGMVVFKFERERPAYTV--HNNVMYYVKERFLHRLDLTNSKDSVV 343
G D + ++ + T+ H + ++ + + +T S DS +
Sbjct: 593 GSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSI 640
Score = 154 (59.3 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 36/160 (22%), Positives = 71/160 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ ++ P I + + + +LW +LL F H+ + + F I +
Sbjct: 493 INSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSA 552
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K+W + C+ T GH + F +LS D +++W ++ C+ L
Sbjct: 553 DGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTL 612
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW-DISGLRKK 170
GH + + DD+VV+AS D +I +W D++ + ++
Sbjct: 613 DGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDVTEIEQE 652
Score = 151 (58.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 56/236 (23%), Positives = 98/236 (41%)
Query: 58 CFHNQQPIFVSGGDDYKIKVWNY------KQRKCIF----TL------LGHLDYIRTTFF 101
C ++ V+ D IKVWN K + + TL GH I +
Sbjct: 439 CSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAV 498
Query: 102 HHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 161
I + S D+ ++W+ + + V TGH + C QF P D I+ ++S D T+++
Sbjct: 499 SPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKL 558
Query: 162 WDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
W GL+ D +K F GH +V ++F + ++S
Sbjct: 559 W---GLQ----------DFSCLKT-------------FEGHDASVLKIIFVSRGTQLLSG 592
Query: 222 AEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLW-DMTK 269
D ++LW + C+ T +++ W +++V+ + D SI LW D+T+
Sbjct: 593 GSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDVTE 648
Score = 140 (54.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 44 LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFH 102
LE+ D+ + + + V+G +K WN+++ +C+ T H+ + T F
Sbjct: 62 LEQDDQED--ITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFD 119
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDI----VVSASLDQT 158
+ + D TI+IW+ + C L G + V +FHP DI + S+S+D
Sbjct: 120 STSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHP--DISRLQLFSSSMDYK 177
Query: 159 IRVWDISGLRKKNVAPG 175
IR+WD++ + V G
Sbjct: 178 IRIWDLNSSKCVAVLDG 194
Score = 89 (36.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 23/77 (29%), Positives = 34/77 (44%)
Query: 15 LSFHP--KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDD 72
+ FHP R + SS + I++WD + + D H V + F +S G D
Sbjct: 158 VEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRD 217
Query: 73 YKIKVWNYKQRKCIFTL 89
VWN K R+ I T+
Sbjct: 218 KICMVWNLKTRESIRTI 234
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 211 (79.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 62/235 (26%), Positives = 98/235 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ L+ P W S + I++WD L H VRG+ + P S +
Sbjct: 204 VRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAE 263
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K W+ + K I GHL + T H +++ D R+W+ ++R+ I VL
Sbjct: 264 DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVL 323
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-----GL---RKKNV-APGMGADDRQ 182
+GH V D V++ SLD T+R+WD++ G+ KK V A +
Sbjct: 324 SGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFT 383
Query: 183 IKLWRMNDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
K W+ + F GH N++ L V S A++ S+ WD
Sbjct: 384 FASGSAGSIKQWKCPEGAFMQNFEGH-NSIINTLSVNDQNVFFSGADNGSMSFWD 437
Score = 184 (69.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 57/255 (22%), Positives = 106/255 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+GL+ P+ P++ S + +++ WD N ++ + H V + H + V+GG
Sbjct: 246 VRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGR 305
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +VW+ + R I L GH + P +++ S D T+R+W+ + + VL
Sbjct: 306 DGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVL 365
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGADDRQIKLWRMND 190
T H V HPT+ S S +I+ W G +N + I +ND
Sbjct: 366 THHKKGVRALATHPTEFTFASGSAG-SIKQWKCPEGAFMQNFE----GHNSIINTLSVND 420
Query: 191 SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS 250
+ G + H + + + + A+ S++ +TF + R
Sbjct: 421 QNVFFSGADNGSMSFWDWKTGH-RFQSLDTTAQPGSLQA---ESGIFTSTFDQSGSR--- 473
Query: 251 EVIVSNAEDKSIRLW 265
++ DK+I++W
Sbjct: 474 --LICGEADKTIKIW 486
Score = 176 (67.0 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 52/222 (23%), Positives = 91/222 (40%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDY 95
W +R L+ H G VR + F SG D IK+W+ + TL GH+
Sbjct: 187 W-HRPWKLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHIST 245
Query: 96 IRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 155
+R +P++ S ++D+ ++ W+ ++ I GH V HPT D++V+
Sbjct: 246 VRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGR 305
Query: 156 DQTIRVWDISGLRKKNVAPG-MGA--------DDRQIKLWRMNDS-KAWEV------DIF 199
D RVWD+ +V G G D Q+ ++ + + W++ +
Sbjct: 306 DGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVL 365
Query: 200 RGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
H V + HP +E ++ SI+ W + + F
Sbjct: 366 THHKKGVRALATHP-TEFTFASGSAGSIKQWKCPEGAFMQNF 406
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 33/134 (24%), Positives = 62/134 (46%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
A+D+ +K W + +K + + GH + V + HP +V+V+ D R+WDM R+
Sbjct: 262 AEDKMVKCWDLETNKV--IRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSN 319
Query: 238 LNTFRRE----QERFWSEV---IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
++ E E +++ + D ++R+WD+ + ++ L HP
Sbjct: 320 IHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHP 379
Query: 291 TLNLFAAGHDAGMV 304
T FA+G AG +
Sbjct: 380 TEFTFASG-SAGSI 392
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 211 (79.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 66/249 (26%), Positives = 112/249 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ P W ++ + I++WD L H VRG+ N+ P S G+
Sbjct: 211 VRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGE 270
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ + K I GHL + H +++ S D T R+W+ +++ + L
Sbjct: 271 DKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTL 330
Query: 132 TGHNHYVMCAQFHPTDDIVVSA-SLDQTIRVWD-ISGL-------RKKNVAPGMGADDRQ 182
+GH + V + + VV+ S D TIR+WD ++G KK+V + RQ
Sbjct: 331 SGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVR-ALVLHPRQ 389
Query: 183 IKL--WRMNDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
++ K W+ + GH N + L V+VS A++ +I +WD
Sbjct: 390 YTFASGSPDNIKQWKFPDGNFIQNLSGH-NAIINTLAVNSDGVLVSGADNGTIHMWDW-- 446
Query: 235 RTCLNTFRR 243
RT N F+R
Sbjct: 447 RTGYN-FQR 454
Score = 181 (68.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 41/123 (33%), Positives = 59/123 (47%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR I FV+G D IK+W+ K +L GH+ +R + P++
Sbjct: 207 HLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLF 266
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
S +D+ ++ W+ + I GH V HPT D++V+ S D T RVWDI K
Sbjct: 267 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIR--TK 324
Query: 170 KNV 172
NV
Sbjct: 325 ANV 327
Score = 140 (54.3 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 39/164 (23%), Positives = 75/164 (45%)
Query: 155 LDQTIRVWDISGLRKKNVAPGMGA--DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFH 212
L T + + G+ N +P + + +D+Q+K W + +K + + GH + V + H
Sbjct: 244 LSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKV--IRHYHGHLSAVYDLDLH 301
Query: 213 PKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS--------EVIVSNAEDKSIRL 264
P +V+V+ + D + R+WD+ + ++T + +V+ + D +IRL
Sbjct: 302 PTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRL 361
Query: 265 WDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKF 308
WD+ T ++ LV HP FA+G + +KF
Sbjct: 362 WDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDNIKQWKF 405
Score = 133 (51.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 44/161 (27%), Positives = 71/161 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A VK S P+ + S H+ I+LWD H+ VR + H +Q F SG
Sbjct: 338 ATVKCQSAEPQVVTVGS--HDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASG 395
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS----- 124
D IK W + I L GH I T + + ++S +D+ TI +W+W++
Sbjct: 396 SPD-NIKQWKFPDGNFIQNLSGHNAIINTLAVNSDGV-LVSGADNGTIHMWDWRTGYNFQ 453
Query: 125 RNCICVLTGH---NHYVMCAQFHPTDDIVVSASLDQTIRVW 162
R V G + F ++ +++A D+TI+V+
Sbjct: 454 RIHAAVQPGSLDSESGIFSCVFDQSESRLITAEADKTIKVY 494
Score = 71 (30.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 27/109 (24%), Positives = 46/109 (42%)
Query: 176 MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
+G+ D I+LW + K H +V ++ HP+ S + D +I+ W
Sbjct: 352 VGSHDTTIRLWDLVAGKTRAT--LTNHKKSVRALVLHPRQYTFASGSPD-NIKQWKFPDG 408
Query: 236 TCLNTFRREQE-----RFWSE-VIVSNAEDKSIRLWDMTKRTCLNTFRR 278
+ S+ V+VS A++ +I +WD RT N F+R
Sbjct: 409 NFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMWDW--RTGYN-FQR 454
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 186 (70.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 39/153 (25%), Positives = 74/153 (48%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
RV ++FHP ++ ++ ++ +LWD T + + H PV + +H+ + V+GG
Sbjct: 355 RVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGG 414
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +VW+ + +CI L GHL + F I + S D T +IW+ + R +
Sbjct: 415 LDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYT 474
Query: 131 LTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVW 162
+ H + + ++ +V+ S D T ++W
Sbjct: 475 IPAHTNLISDVKYQQECGSFLVTCSYDSTTKIW 507
Score = 162 (62.1 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 34/149 (22%), Positives = 72/149 (48%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
LS+H +++ + ++WD R + + H G V G+ F +G D
Sbjct: 401 LSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNT 460
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWNWQSRNCICVLTG 133
K+W+ ++R+ ++T+ H + I + E ++++ S D T +IW+ ++ + L G
Sbjct: 461 CKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQG 520
Query: 134 HNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
H++ V+ P + + S D+T ++W
Sbjct: 521 HDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 157 (60.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 38/161 (23%), Positives = 72/161 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-----NQQPI- 65
V +F +L+S +G+ +LW L + H V G+ +++ +
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVV 323
Query: 66 -FVSGGDDYKIKVWNYKQRKCIFTLLGHLDY-IRTTFFHHEYPWILSASDDQTIRIWNWQ 123
SGG D +K+W + + I + GH+ + + FH ++ +A D + R+W+ +
Sbjct: 324 AMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLE 383
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + GH V C +H ++V+ LD RVWD+
Sbjct: 384 QKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDL 424
Score = 140 (54.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 30/137 (21%), Positives = 58/137 (42%)
Query: 29 HNGVIQLWDYRMNTLLEKFDEH-EGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIF 87
H+G ++LW + + H V + FH + D ++W+ +Q+ +
Sbjct: 330 HDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVL 389
Query: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTD 147
GH + +H + +++ D R+W+ ++ CI L GH V F P
Sbjct: 390 HQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNG 449
Query: 148 DIVVSASLDQTIRVWDI 164
+ + S D T ++WD+
Sbjct: 450 FHIATGSQDNTCKIWDL 466
Score = 130 (50.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 44/166 (26%), Positives = 73/166 (43%)
Query: 172 VAPGMGADDRQIKLWRMNDSKAWEVDIFRGHY-NNVSCVLFHPKSEVIVSNAEDKSIRLW 230
VA G D +KLW N+ ++ DI GH + VS V FHP + + D S RLW
Sbjct: 323 VAMASGGHDGAVKLWGFNNEESI-ADI-TGHMPHRVSKVAFHPSGRFLATACYDSSWRLW 380
Query: 231 DMTKRT-CLNTFRREQE----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTFRREQERF 283
D+ ++T L+ + + S+ V+V+ D R+WD+ C+
Sbjct: 381 DLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAV 440
Query: 284 WVLVAHPT-LNLFAAGHDAGMVVFKFERERPAYTV--HNNVMYYVK 326
+ + P ++ D ++ R +P YT+ H N++ VK
Sbjct: 441 FGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVK 486
Score = 108 (43.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 30/120 (25%), Positives = 50/120 (41%)
Query: 53 PVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYI-----RTTFFHHEYPW 107
PV F + ++ K+W+ + TL GH Y+ R E
Sbjct: 263 PVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENV 322
Query: 108 ILSASD--DQTIRIWNWQSRNCICVLTGHN-HYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ AS D +++W + + I +TGH H V FHP+ + +A D + R+WD+
Sbjct: 323 VAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDL 382
Score = 75 (31.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 180 DRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
D K+W +K W+ + +GH N V V P S+ I + + D++ +LW
Sbjct: 501 DSTTKIW---SNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 43 (20.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 11/53 (20%), Positives = 20/53 (37%)
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
QS +C G V A F +++++S ++W + K G
Sbjct: 249 QSLAPLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRG 301
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 144 (55.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
+ E S V ++F P ++ S + ++ WD T H V I +
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 167
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFH--HEYP---WILSASDDQT 116
SG + ++ +W+ + TL GH +I + H P ++ S+S D +
Sbjct: 168 GKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGS 227
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+R+W+ + C +LTGH V C ++ D ++ SAS D+TI+VW
Sbjct: 228 VRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVW 272
Score = 142 (55.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 67 VSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
VSG DD+ + +W+ + +K + + GH I F + + SAS D++I++W+ ++
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 404
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
+ L GH V + ++VS S D T++VWD+ + PG AD+
Sbjct: 405 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGH-ADE 458
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 33/145 (22%), Positives = 65/145 (44%)
Query: 19 PKRPWILSSLHNGVIQLWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKV 77
P+R ++S + + LW + L + H+ + + F I S D IK+
Sbjct: 341 PER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKL 398
Query: 78 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHY 137
W+ + K + +L GH+ + + + ++S S D T+++W+ +++ L GH
Sbjct: 399 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADE 458
Query: 138 VMCAQFHPTDDIVVSASLDQTIRVW 162
V + P V S D+ +R+W
Sbjct: 459 VYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 32/119 (26%), Positives = 50/119 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L + A + + F P + S+ + I+LWD R L H V I +
Sbjct: 365 LARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ VSG D +KVW+ K +K L GH D + + + + S D+ +RIW
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 116 (45.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD + LW + K + GH ++ VLF P S ++ S + DKSI+LWD
Sbjct: 347 GSDDFTLFLWSPAEDKK-PLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 405
Query: 237 CLNTFRRE----QERFWS---EVIVSNAEDKSIRLWDM 267
L + R + WS ++VS + D ++++WD+
Sbjct: 406 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Score = 111 (44.1 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 44/178 (24%), Positives = 75/178 (42%)
Query: 5 FETKSAR--VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICF-- 59
F K R V +S+ P + S NG + LWD + + H + G+ +
Sbjct: 150 FTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEP 209
Query: 60 -H-NQQPIFV-SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
H N + +V S D ++VW+ +C L GH + + + + SAS D+T
Sbjct: 210 LHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGD-GLLYSASQDRT 268
Query: 117 IRIWNWQSRNCIC-VLTGHNHYVMCAQFHPTDDIVVSASLDQ---TIRVWDISGLRKK 170
I++W +C L GH H+V TD + + + + T+ D+ G K+
Sbjct: 269 IKVWRAHD-GVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEATVNAQDLQGSLKE 324
Score = 99 (39.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+C +L GH + + + F ++ S S D T+R W+ + GH H+V+ +
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 144 HPTDDIVVSASLDQTIRVWDIS-GLR 168
P + S + + +WD S GL+
Sbjct: 165 SPDGKKLASGCKNGQVLLWDPSTGLQ 190
Score = 95 (38.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 28/132 (21%), Positives = 54/132 (40%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V + F SG D ++ W+ FT GH ++ + + + +
Sbjct: 113 HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA 172
Query: 110 SASDDQTIRIWNWQSRNCIC-VLTGHNHYVMCAQFHPTD-----DIVVSASLDQTIRVWD 163
S + + +W+ + + LTGH+ ++ + P V S+S D ++RVWD
Sbjct: 173 SGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWD 232
Query: 164 ISGLRKKNVAPG 175
+ R + + G
Sbjct: 233 TTAGRCERILTG 244
Score = 90 (36.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKRTCL 238
D+ IKLW K + RGH V + + S ++VS + D ++++WD+ ++
Sbjct: 393 DKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAT 450
Query: 239 NTFRREQERF---WS---EVIVSNAEDKSIRLW 265
+ E + WS + + S +DK +R+W
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 57 (25.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/99 (27%), Positives = 43/99 (43%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCV---------LFHPKSEVIVSNAEDKSIR 228
+ DR IK+WR +D GH+ N + F P +E V NA+D
Sbjct: 264 SQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEP-AEATV-NAQDLQGS 321
Query: 229 LWDMTKRTC--LNTFRREQERFWSEVIVSNAEDKSIRLW 265
L ++ +R N R + E +VS ++D ++ LW
Sbjct: 322 LKELKERASSRYNLVRGQGP----ERLVSGSDDFTLFLW 356
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 214 (80.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 39/153 (25%), Positives = 75/153 (49%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V ++F+ + +L+ +GVI+LWD + ++ F H + FH SG
Sbjct: 61 VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++VW+ +++ CI T GH I T F + W++S D +++W+ + +
Sbjct: 121 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 180
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
H + FHP + ++ + S D+T++ WD+
Sbjct: 181 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 210 (79.0 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 53/221 (23%), Positives = 98/221 (44%)
Query: 44 LEKFDEHEGPVRGICFHNQQP-IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
L++F H G V + + + ++GGDDYK+ +W+ + +L GH + + F+
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFN 67
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
E +L+ + I++W+ + + TGH +FHP + + S S D +RVW
Sbjct: 68 SEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVW 127
Query: 163 DISGLRKKNVAPGMGADDRQIKL--------WRMN---DS--KAWEVDI------FRGHY 203
D RKK R I W ++ D+ K W++ F+ H
Sbjct: 128 DT---RKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHE 184
Query: 204 NNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRRE 244
+ + FHP ++ + + D++++ WD+ + T R E
Sbjct: 185 GPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPE 225
Score = 158 (60.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 6 ETKSARVKGLS---FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
+T +G+S F P W++S + V+++WD LL +F HEGP+R + FH
Sbjct: 136 QTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPL 195
Query: 63 QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ + +G D +K W+ + + I T +R FH + + DD +++++W
Sbjct: 196 EFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDG-LKVYSW 254
Query: 123 QSRNC 127
+ C
Sbjct: 255 EPVIC 259
Score = 137 (53.3 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 32/140 (22%), Positives = 64/140 (45%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D +++W + K + ++GH +S + F P +VS D +++WD+T
Sbjct: 118 GSSDTNLRVW--DTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 175
Query: 237 CLNTFRREQERFWS------E-VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
L+ F+ + S E ++ + + D++++ WD+ + T R E + H
Sbjct: 176 LLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFH 235
Query: 290 PTLNLFAAGHDAGMVVFKFE 309
P G D G+ V+ +E
Sbjct: 236 PDGQTLFCGLDDGLKVYSWE 255
Score = 137 (53.3 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/162 (24%), Positives = 68/162 (41%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
M+ F + + FHP ++ S + +++WD R ++ + H + I F
Sbjct: 92 MVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS 151
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
VSGG D +KVW+ K + H IR+ FH + + S D+T++ W
Sbjct: 152 PDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFW 211
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ ++ I V FHP D + LD ++V+
Sbjct: 212 DLETFELIGTTRPEATGVRAIAFHP-DGQTLFCGLDDGLKVY 252
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 208 (78.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 40/153 (26%), Positives = 76/153 (49%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V + F P + S+ + ++LW +F H PVR + F + +
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 80
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IKVW+ +++ +++L H ++R F + I+S S+D+TI+IW+ ++ C+
Sbjct: 81 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 140
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + F+P+ + SA DQT++VWD+
Sbjct: 141 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV 173
Score = 206 (77.6 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 49/224 (21%), Positives = 107/224 (47%)
Query: 35 LWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLD 94
LW+++ + ++ H+ V + F + S D +++W +R H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 95 YIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS 154
+R+ F + ++ +AS+D++I++W+ + + L H H+V CA+F P ++VS S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 155 LDQTIRVWDISGLR-KKNVAPGMG----ADDRQ----IKLWRMNDS-KAWEVDI------ 198
D+TI++WD + + N + +G D I + + K W+V +
Sbjct: 122 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQH 181
Query: 199 FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
++ H V+C+ FHP +++ + D ++++ D+ + + T +
Sbjct: 182 YQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 225
Score = 170 (64.9 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/163 (23%), Positives = 79/163 (48%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHN 61
++F+ +A V+ + F ++ ++ + I++W YR L + H VR F
Sbjct: 54 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLY-RHTHWVRCAKFSP 112
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ VS +D IK+W+ ++C+ + + F+ I SA DQT+++W+
Sbjct: 113 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 172
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + H+ V C FHP+ + +++AS D T+++ D+
Sbjct: 173 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 215
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 58/235 (24%), Positives = 92/235 (39%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S + I++WD + F + G + F+ S G
Sbjct: 105 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGS 164
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +KVW+ + K + H + FH ++++AS D T++I + I L
Sbjct: 165 DQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTL 224
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW--DISGLRKKNVAPGMGADDRQIKLWRMN 189
GH V F ++ S D + +W + L K G R +K R++
Sbjct: 225 QGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCK------GLTKRNLK--RLH 276
Query: 190 -DSKAWEVDIF----RGHYNNVSCVLFHPKSEVI---VSNAEDKSIRLWDMTKRT 236
DS +DI+ H V V +PK EVI +S I +D T T
Sbjct: 277 FDSPPHLLDIYPRTPHPHEEKVETVEINPKLEVIDLQISTPPVMDILSFDSTTTT 331
Score = 153 (58.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 41/152 (26%), Positives = 73/152 (48%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ IK+W M + + ++R H + V C F P +IVS +EDK+I++WD T + C
Sbjct: 79 SEDKSIKVWSMYRQR-FLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 136
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
+N F + F + V I S D+++++WD+ L ++ + H
Sbjct: 137 VNNFS-DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFH 195
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D + + R YT+ +
Sbjct: 196 PSGNYLITASSDGTLKILDLLEGRLIYTLQGH 227
Score = 138 (53.6 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
DR ++LW + D + + F+ H V V F + + + +EDKSI++W M ++ L
Sbjct: 39 DRTVRLW-IPDKRG-KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLY 96
Query: 240 TFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTF 276
+ R +F + +IVS +EDK+I++WD T + C+N F
Sbjct: 97 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 140
Score = 38 (18.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 48/201 (23%), Positives = 77/201 (38%)
Query: 736 VKVAKCRHVVTKKMSSVGCEEIFYAGTGALLCREADHVI-LFDVQQKRAL--AQVKVAKC 792
V+V K V C F+ L+ +D + + D+ + R + Q
Sbjct: 173 VRVNKLLQHYQVHSGGVNCIS-FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 231
Query: 793 RHVLYNKGEEIFYAG---TGALLCREADHVILFDVQQKRALAQVKVAKCRHVV-WSPDMT 848
V ++KG E+F +G T LL R + KR L ++ H++ P
Sbjct: 232 FTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDSPPHLLDIYPRTP 291
Query: 849 HLALLSKHTLHICNRKMEGAGL-MKSDVINNIDSSLAATEVDVQGWGDDADLGNQV--YY 905
H T+ I N K+E L + + + +I S + T + G D G + Y+
Sbjct: 292 HPHEEKVETVEI-NPKLEVIDLQISTPPVMDILSFDSTTTTETSG-RTLPDKGEEACGYF 349
Query: 906 LDREC-SPHVLRIDPTEFKFK 925
L+ SP L PT K K
Sbjct: 350 LNPSLMSPECL---PTTTKKK 367
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 220 (82.5 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 42/153 (27%), Positives = 76/153 (49%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
++ L K I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ +++ CIF H +R F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
TGH V +FHP++ + + + +TIR WD+
Sbjct: 186 TGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDL 218
Score = 210 (79.0 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 49/189 (25%), Positives = 85/189 (44%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ +GGDD ++ VW+ + C+ +L GH I + + I++ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 94
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIK 184
+ L GH + FHP V S SLD I++WD+ R+K + + ++
Sbjct: 95 AKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV---RRKGCIFKYKSHTQAVR 151
Query: 185 LWRMNDS-------------KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDK 225
R + K W++ F GHY V+ V FHP + + +
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHR 211
Query: 226 SIRLWDMTK 234
+IR WD+ K
Sbjct: 212 TIRFWDLEK 220
Score = 181 (68.8 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ +W + H P+ + ++ + V+G I+VW+ + K + TLLGH
Sbjct: 45 VNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGH 104
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 152
I + FH ++ S S D I++W+ + + CI H V C +F P + S
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTIRVWDIS 165
A+ D T+++WD++
Sbjct: 165 AADDHTVKLWDLT 177
Score = 169 (64.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 41/154 (26%), Positives = 68/154 (44%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + K+ H VR + F S
Sbjct: 106 ANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASA 165
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCI 128
DD+ +K+W+ K +F GH + FH EYP + + +TIR W+ + + +
Sbjct: 166 ADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYP-LAGSPVHRTIRFWDLEKFHVV 224
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ V C F+P D + ++RV+
Sbjct: 225 SCIEEEATPVRCILFNP-DGCCLYGGFQDSLRVY 257
Score = 38 (18.4 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 873 SDVINNIDSSLAATEVDV 890
SD+ N++D+++A ++ V
Sbjct: 525 SDMKNSVDAAVATNDLSV 542
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 207 (77.9 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 63/247 (25%), Positives = 110/247 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 265
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ + K I GHL + H +++ S D T RIW+ +++ + L
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 325
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGL-------RKKNV-APGMGADDRQ 182
+GH + V + + +++ S D TIR+WD ++G KK+V A +
Sbjct: 326 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYT 385
Query: 183 IKLWRMNDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
++ K W+ + GH N + L V+VS A++ ++ LWD RT
Sbjct: 386 FASGSPDNIKQWKFPDGSFIQNLSGH-NAIINTLTVNSDGVLVSGADNGTMHLWDW--RT 442
Query: 237 CLNTFRR 243
N F+R
Sbjct: 443 GYN-FQR 448
Score = 178 (67.7 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 52/198 (26%), Positives = 85/198 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR I FV+G D IK+W+ K +L GH+ +R P++
Sbjct: 202 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 261
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S +D+ ++ W+ + I GH V HPT D++V+ S D T R+WD+
Sbjct: 262 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 321
Query: 165 ----SGLRKKNVAPGMGADDRQIKLWRMNDS--KAWEVDIFR------GHYNNVSCVLFH 212
SG A + QI + +D+ + W++ + H +V V+ H
Sbjct: 322 VHTLSGHTNAVATVRCQAAEPQI-ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLH 380
Query: 213 PKSEVIVSNAEDKSIRLW 230
P+ S + D +I+ W
Sbjct: 381 PRHYTFASGSPD-NIKQW 397
Score = 135 (52.6 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYK 81
P I++ H+ I+LWD H+ VR + H + F SG D IK W +
Sbjct: 342 PQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFP 400
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-----RNCICVLTG--- 133
I L GH I T + + ++S +D+ T+ +W+W++ R V G
Sbjct: 401 DGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLD 459
Query: 134 -HNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ CA F ++ +++A D+TI+V+
Sbjct: 460 SESGIFACA-FDQSESRLLTAEADKTIKVY 488
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+D+Q+K W + +K + + GH + V + HP +V+V+ + D + R+WD+ + +
Sbjct: 265 EDKQVKCWDLEYNKV--IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV 322
Query: 239 NTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
+T + I++ + D +IRLWD+ T ++ +V HP
Sbjct: 323 HTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPR 382
Query: 292 LNLFAAGHDAGMVVFKF 308
FA+G + +KF
Sbjct: 383 HYTFASGSPDNIKQWKF 399
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAP------GMGADDRQ 182
V++GH +V C P + V+ S D+TI++WD+ SG K ++ G+ R
Sbjct: 198 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 257
Query: 183 IKLWRMNDSK---AWEVD---IFRGHYNNVSCVL---FHPKSEVIVSNAEDKSIRLWDMT 233
L+ + K W+++ + R ++ ++S V HP +V+V+ + D + R+WD+
Sbjct: 258 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 317
Query: 234 KRTCLNT 240
+ ++T
Sbjct: 318 TKASVHT 324
Score = 123 (48.4 bits), Expect = 0.00055, P = 0.00055
Identities = 40/158 (25%), Positives = 67/158 (42%)
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
GHL ++R W ++ S D+TI+IW+ S LTGH V +
Sbjct: 201 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 260
Query: 151 VSASLDQTIRVWDISG---LRKKN--VAPGMGAD-----DRQIKLWRMNDSKAWEV---- 196
S D+ ++ WD+ +R + ++ G D D + R + ++ W+V
Sbjct: 261 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 320
Query: 197 --DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
GH N V+ V I++ + D +IRLWD+
Sbjct: 321 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 207 (77.9 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 61/247 (24%), Positives = 109/247 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 266
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ + K I GHL + H +++ S D T RIW+ +++ + L
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 326
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMN-- 189
+GH + V + + +++ S D TIR+WD+ + + R + L ++
Sbjct: 327 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYT 386
Query: 190 ------DS-KAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
D+ K W+ + GH N + L V+VS A++ ++ LWD RT
Sbjct: 387 FASGSPDNIKQWKFPDGGFIQNLSGH-NAIINTLAVNTDGVLVSGADNGTMHLWDW--RT 443
Query: 237 CLNTFRR 243
N F+R
Sbjct: 444 GYN-FQR 449
Score = 175 (66.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 36/115 (31%), Positives = 55/115 (47%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR I FV+G D IK+W+ K +L GH+ +R P++
Sbjct: 203 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 262
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S +D+ ++ W+ + I GH V HPT D++V+ S D T R+WD+
Sbjct: 263 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+D+Q+K W + +K + + GH + V + HP +V+V+ + D + R+WD+ + +
Sbjct: 266 EDKQVKCWDLEYNKV--IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV 323
Query: 239 NTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
+T + I++ + D +IRLWD+ T ++ +V HP
Sbjct: 324 HTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPL 383
Query: 292 LNLFAAGHDAGMVVFKF 308
FA+G + +KF
Sbjct: 384 HYTFASGSPDNIKQWKF 400
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 40/150 (26%), Positives = 67/150 (44%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYK 81
P I++ H+ I+LWD H+ VR + H F SG D IK W +
Sbjct: 343 PQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPD-NIKQWKFP 401
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-----RNCICVLTG--- 133
I L GH I T + + ++S +D+ T+ +W+W++ R V G
Sbjct: 402 DGGFIQNLSGHNAIINTLAVNTDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLD 460
Query: 134 -HNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ CA F ++ +++A D+TI+V+
Sbjct: 461 SESGIFACA-FDRSESRLLTAEADKTIKVY 489
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAP------GMGADDRQ 182
V++GH +V C P + V+ S D+TI++WD+ SG K ++ G+ R
Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 258
Query: 183 IKLWRMNDSK---AWEVD---IFRGHYNNVSCVL---FHPKSEVIVSNAEDKSIRLWDMT 233
L+ + K W+++ + R ++ ++S V HP +V+V+ + D + R+WD+
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 234 KRTCLNT 240
+ ++T
Sbjct: 319 TKASVHT 325
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 40/158 (25%), Positives = 67/158 (42%)
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
GHL ++R W ++ S D+TI+IW+ S LTGH V +
Sbjct: 202 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 261
Query: 151 VSASLDQTIRVWDISG---LRKKN--VAPGMGAD-----DRQIKLWRMNDSKAWEV---- 196
S D+ ++ WD+ +R + ++ G D D + R + ++ W+V
Sbjct: 262 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 321
Query: 197 --DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
GH N V+ V I++ + D +IRLWD+
Sbjct: 322 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
Score = 67 (28.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 28/108 (25%), Positives = 44/108 (40%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D I+LW + K V + H +V V+ HP S + D +I+ W
Sbjct: 348 GSHDTTIRLWDLVAGKT-RVTL-TNHKKSVRAVVLHPLHYTFASGSPD-NIKQWKFPDGG 404
Query: 237 CLNTFRREQERF------WSEVIVSNAEDKSIRLWDMTKRTCLNTFRR 278
+ V+VS A++ ++ LWD RT N F+R
Sbjct: 405 FIQNLSGHNAIINTLAVNTDGVLVSGADNGTMHLWDW--RTGYN-FQR 449
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 207 (77.9 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 63/247 (25%), Positives = 110/247 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 266
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ + K I GHL + H +++ S D T RIW+ +++ + L
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 326
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGL-------RKKNV-APGMGADDRQ 182
+GH + V + + +++ S D TIR+WD ++G KK+V A +
Sbjct: 327 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYT 386
Query: 183 IKLWRMNDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
++ K W+ + GH N + L V+VS A++ ++ LWD RT
Sbjct: 387 FASGSPDNIKQWKFPDGSFIQNLSGH-NAIINTLTVNSDGVLVSGADNGTMHLWDW--RT 443
Query: 237 CLNTFRR 243
N F+R
Sbjct: 444 GYN-FQR 449
Score = 178 (67.7 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 52/198 (26%), Positives = 85/198 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR I FV+G D IK+W+ K +L GH+ +R P++
Sbjct: 203 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 262
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S +D+ ++ W+ + I GH V HPT D++V+ S D T R+WD+
Sbjct: 263 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 322
Query: 165 ----SGLRKKNVAPGMGADDRQIKLWRMNDS--KAWEVDIFR------GHYNNVSCVLFH 212
SG A + QI + +D+ + W++ + H +V V+ H
Sbjct: 323 VHTLSGHTNAVATVRCQAAEPQI-ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLH 381
Query: 213 PKSEVIVSNAEDKSIRLW 230
P+ S + D +I+ W
Sbjct: 382 PRHYTFASGSPD-NIKQW 398
Score = 135 (52.6 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYK 81
P I++ H+ I+LWD H+ VR + H + F SG D IK W +
Sbjct: 343 PQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFP 401
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-----RNCICVLTG--- 133
I L GH I T + + ++S +D+ T+ +W+W++ R V G
Sbjct: 402 DGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLD 460
Query: 134 -HNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ CA F ++ +++A D+TI+V+
Sbjct: 461 SESGIFACA-FDQSESRLLTAEADKTIKVY 489
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+D+Q+K W + +K + + GH + V + HP +V+V+ + D + R+WD+ + +
Sbjct: 266 EDKQVKCWDLEYNKV--IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV 323
Query: 239 NTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
+T + I++ + D +IRLWD+ T ++ +V HP
Sbjct: 324 HTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPR 383
Query: 292 LNLFAAGHDAGMVVFKF 308
FA+G + +KF
Sbjct: 384 HYTFASGSPDNIKQWKF 400
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAP------GMGADDRQ 182
V++GH +V C P + V+ S D+TI++WD+ SG K ++ G+ R
Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 258
Query: 183 IKLWRMNDSK---AWEVD---IFRGHYNNVSCVL---FHPKSEVIVSNAEDKSIRLWDMT 233
L+ + K W+++ + R ++ ++S V HP +V+V+ + D + R+WD+
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 234 KRTCLNT 240
+ ++T
Sbjct: 319 TKASVHT 325
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 40/158 (25%), Positives = 67/158 (42%)
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
GHL ++R W ++ S D+TI+IW+ S LTGH V +
Sbjct: 202 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 261
Query: 151 VSASLDQTIRVWDISG---LRKKN--VAPGMGAD-----DRQIKLWRMNDSKAWEV---- 196
S D+ ++ WD+ +R + ++ G D D + R + ++ W+V
Sbjct: 262 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 321
Query: 197 --DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
GH N V+ V I++ + D +IRLWD+
Sbjct: 322 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 207 (77.9 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 63/247 (25%), Positives = 110/247 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 208 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 267
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ + K I GHL + H +++ S D T RIW+ +++ + L
Sbjct: 268 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 327
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGL-------RKKNV-APGMGADDRQ 182
+GH + V + + +++ S D TIR+WD ++G KK+V A +
Sbjct: 328 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYT 387
Query: 183 IKLWRMNDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
++ K W+ + GH N + L V+VS A++ ++ LWD RT
Sbjct: 388 FASGSPDNIKQWKFPDGSFIQNLSGH-NAIINTLTVNSDGVLVSGADNGTMHLWDW--RT 444
Query: 237 CLNTFRR 243
N F+R
Sbjct: 445 GYN-FQR 450
Score = 178 (67.7 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 52/198 (26%), Positives = 85/198 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR I FV+G D IK+W+ K +L GH+ +R P++
Sbjct: 204 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 263
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S +D+ ++ W+ + I GH V HPT D++V+ S D T R+WD+
Sbjct: 264 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 323
Query: 165 ----SGLRKKNVAPGMGADDRQIKLWRMNDS--KAWEVDIFR------GHYNNVSCVLFH 212
SG A + QI + +D+ + W++ + H +V V+ H
Sbjct: 324 VHTLSGHTNAVATVRCQAAEPQI-ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLH 382
Query: 213 PKSEVIVSNAEDKSIRLW 230
P+ S + D +I+ W
Sbjct: 383 PRHYTFASGSPD-NIKQW 399
Score = 135 (52.6 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYK 81
P I++ H+ I+LWD H+ VR + H + F SG D IK W +
Sbjct: 344 PQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFP 402
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-----RNCICVLTG--- 133
I L GH I T + + ++S +D+ T+ +W+W++ R V G
Sbjct: 403 DGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLD 461
Query: 134 -HNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ CA F ++ +++A D+TI+V+
Sbjct: 462 SESGIFACA-FDQSESRLLTAEADKTIKVY 490
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+D+Q+K W + +K + + GH + V + HP +V+V+ + D + R+WD+ + +
Sbjct: 267 EDKQVKCWDLEYNKV--IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV 324
Query: 239 NTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
+T + I++ + D +IRLWD+ T ++ +V HP
Sbjct: 325 HTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPR 384
Query: 292 LNLFAAGHDAGMVVFKF 308
FA+G + +KF
Sbjct: 385 HYTFASGSPDNIKQWKF 401
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAP------GMGADDRQ 182
V++GH +V C P + V+ S D+TI++WD+ SG K ++ G+ R
Sbjct: 200 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 259
Query: 183 IKLWRMNDSK---AWEVD---IFRGHYNNVSCVL---FHPKSEVIVSNAEDKSIRLWDMT 233
L+ + K W+++ + R ++ ++S V HP +V+V+ + D + R+WD+
Sbjct: 260 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 319
Query: 234 KRTCLNT 240
+ ++T
Sbjct: 320 TKASVHT 326
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 40/158 (25%), Positives = 67/158 (42%)
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
GHL ++R W ++ S D+TI+IW+ S LTGH V +
Sbjct: 203 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 262
Query: 151 VSASLDQTIRVWDISG---LRKKN--VAPGMGAD-----DRQIKLWRMNDSKAWEV---- 196
S D+ ++ WD+ +R + ++ G D D + R + ++ W+V
Sbjct: 263 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 322
Query: 197 --DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
GH N V+ V I++ + D +IRLWD+
Sbjct: 323 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 360
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 213 (80.0 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ + P W + + I++WD L H VRG+ + P S G+
Sbjct: 166 VRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGE 225
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +K W+ + K I GHL + H +++A D R+W+ ++R + VL
Sbjct: 226 DKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVL 285
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR--------KKNV-APGMGADDRQ 182
+GH V D VV+ S+D TIR+WD++ + KK V A + D+
Sbjct: 286 SGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFT 345
Query: 183 IKLWRMNDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
++ K W+ + F GH N + L V+ S A++ S+ WD
Sbjct: 346 FASGSSDNIKHWKFPEGAFMGNFEGH-NAIVNTLSINSDNVMFSGADNGSMCFWD 399
Score = 192 (72.6 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 40/153 (26%), Positives = 71/153 (46%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A V+GL+ P+ P++ S + +++ WD N ++ + H V + H + V+
Sbjct: 206 ATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTA 265
Query: 70 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
G D +VW+ + R+ + L GH + + P +++ S D TIR+W+ + +
Sbjct: 266 GRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLT 325
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
LT H V HP + S S D I+ W
Sbjct: 326 TLTHHKKTVRALSLHPDEFTFASGSSDN-IKHW 357
Score = 177 (67.4 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 54/217 (24%), Positives = 89/217 (41%)
Query: 42 TLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 101
TL+ H G VR + F +G D IK+W+ TL GH+ +R
Sbjct: 154 TLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAV 213
Query: 102 HHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 161
+P++ S +D+ ++ W+ ++ I GH V + HPT D++V+A D RV
Sbjct: 214 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARV 273
Query: 162 WD---------ISGLRKKNVAP-GMGADDRQIKLWRMNDS-KAWEV------DIFRGHYN 204
WD +SG K VA + D Q+ M+ + + W++ H
Sbjct: 274 WDMRTRQNVHVLSG-HKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKK 332
Query: 205 NVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
V + HP S + D +I+ W + + F
Sbjct: 333 TVRALSLHPDEFTFASGSSD-NIKHWKFPEGAFMGNF 368
Score = 141 (54.7 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 35/137 (25%), Positives = 61/137 (44%)
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+D+ +K W + +K + + GH + V + HP +V+V+ D R+WDM R +
Sbjct: 225 EDKMVKCWDLETNKV--IRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNV 282
Query: 239 NTFRREQERFWSEVI-------VSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
+ + S + V+ + D +IRLWD+ L T ++ L HP
Sbjct: 283 HVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPD 342
Query: 292 LNLFAAGHDAGMVVFKF 308
FA+G + +KF
Sbjct: 343 EFTFASGSSDNIKHWKF 359
Score = 39 (18.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 435 WRMGNDRQESALCGWPGTGYPEVALHFVKDDRTRLTLALEC 475
W+ G+ QE PG+ E + D+T L L + C
Sbjct: 400 WKSGHKYQELQSVVQPGSLDSEAGIFASSFDKTGLRL-ITC 439
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 206 (77.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 60/247 (24%), Positives = 108/247 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 265
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ + K I GHL + H +++ S D T RIW+ +++ + L
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTL 325
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM--- 188
+GH + V + + +++ S D TIR+WD+ + + R + L +
Sbjct: 326 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYT 385
Query: 189 ------NDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
++ K W+ + GH N + L V+VS A++ ++ LWD RT
Sbjct: 386 FASGSPDNIKQWKFPDGGFIQNLSGH-NAIINTLAVNADGVLVSGADNGTMHLWDW--RT 442
Query: 237 CLNTFRR 243
N F+R
Sbjct: 443 GYN-FQR 448
Score = 174 (66.3 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 36/115 (31%), Positives = 55/115 (47%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR I FV+G D IK+W+ K +L GH+ +R P++
Sbjct: 202 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 261
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S +D+ ++ W+ + I GH V HPT D++V+ S D T R+WD+
Sbjct: 262 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDV 316
Score = 141 (54.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 34/137 (24%), Positives = 65/137 (47%)
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+D+Q+K W + +K + + GH + V + HP +V+V+ + D + R+WD+ + +
Sbjct: 265 EDKQVKCWDLEYNKV--IRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASV 322
Query: 239 NTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
+T + I++ + D +IRLWD+ T ++ +V HP
Sbjct: 323 HTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPL 382
Query: 292 LNLFAAGHDAGMVVFKF 308
L FA+G + +KF
Sbjct: 383 LYTFASGSPDNIKQWKF 399
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAP------GMGADDRQ 182
V++GH +V C P + V+ S D+TI++WD+ SG K ++ G+ R
Sbjct: 198 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 257
Query: 183 IKLWRMNDSK---AWEVD---IFRGHYNNVSCVL---FHPKSEVIVSNAEDKSIRLWDMT 233
L+ + K W+++ + R ++ ++S V HP +V+V+ + D + R+WD+
Sbjct: 258 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVR 317
Query: 234 KRTCLNT 240
+ ++T
Sbjct: 318 TKASVHT 324
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 40/150 (26%), Positives = 67/150 (44%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYK 81
P I++ H+ I+LWD H+ VR + H F SG D IK W +
Sbjct: 342 PQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPD-NIKQWKFP 400
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-----RNCICVLTG--- 133
I L GH I T + + ++S +D+ T+ +W+W++ R V G
Sbjct: 401 DGGFIQNLSGHNAIINTLAVNADGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLD 459
Query: 134 -HNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ CA F ++ +++A D+TI+V+
Sbjct: 460 SESGIFACA-FDRSESRLLTAEADKTIKVY 488
Score = 123 (48.4 bits), Expect = 0.00055, P = 0.00055
Identities = 40/158 (25%), Positives = 67/158 (42%)
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
GHL ++R W ++ S D+TI+IW+ S LTGH V +
Sbjct: 201 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 260
Query: 151 VSASLDQTIRVWDISG---LRKKN--VAPGMGAD-----DRQIKLWRMNDSKAWEV---- 196
S D+ ++ WD+ +R + ++ G D D + R + ++ W+V
Sbjct: 261 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKA 320
Query: 197 --DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
GH N V+ V I++ + D +IRLWD+
Sbjct: 321 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
Score = 65 (27.9 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 28/108 (25%), Positives = 45/108 (41%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D I+LW + K V + H +V V+ HP S + D +I+ W
Sbjct: 347 GSHDTTIRLWDLVAGKT-RVTL-TNHKKSVRAVVLHPLLYTFASGSPD-NIKQWKFPDGG 403
Query: 237 CLNTFRREQERFWS------EVIVSNAEDKSIRLWDMTKRTCLNTFRR 278
+ + V+VS A++ ++ LWD RT N F+R
Sbjct: 404 FIQNLSGHNAIINTLAVNADGVLVSGADNGTMHLWDW--RTGYN-FQR 448
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 206 (77.6 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 65/247 (26%), Positives = 110/247 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 209 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGE 268
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++K W+ + K I GHL + H +++ S D T RIW+ +++ + L
Sbjct: 269 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 328
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGL-------RKKNV-APGMGADDRQ 182
+GH + V + + VV+ S D TIR+WD ++G KK+V A +
Sbjct: 329 SGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYT 388
Query: 183 IKLWRMNDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
++ K W+ + GH N + L V+VS A++ ++ LWD RT
Sbjct: 389 FASGSPDNIKQWKFPDGNFIQNLSGH-NAIINTLTVNSDGVLVSGADNGTMHLWDW--RT 445
Query: 237 CLNTFRR 243
N F+R
Sbjct: 446 GYN-FQR 451
Score = 177 (67.4 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 50/197 (25%), Positives = 83/197 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H G VR I FV+G D IK+W+ K +L GH+ +R P++
Sbjct: 205 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLF 264
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI----- 164
S +D+ ++ W+ + I GH V HPT D++V+ S D T R+WD+
Sbjct: 265 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 324
Query: 165 ----SGLRKKNVAPGMGADDRQIKLWRMNDS-KAWEVDIFR------GHYNNVSCVLFHP 213
SG A + Q+ + + + W++ + H +V V+ HP
Sbjct: 325 VHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHP 384
Query: 214 KSEVIVSNAEDKSIRLW 230
+ S + D +I+ W
Sbjct: 385 RHYTFASGSPD-NIKQW 400
Score = 133 (51.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 32/137 (23%), Positives = 64/137 (46%)
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+D+Q+K W + +K + + GH + V + HP +V+V+ + D + R+WD+ + +
Sbjct: 268 EDKQVKCWDLEYNKV--IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV 325
Query: 239 NTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
+T + +V+ + D +IRLWD+ T ++ ++ HP
Sbjct: 326 HTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPR 385
Query: 292 LNLFAAGHDAGMVVFKF 308
FA+G + +KF
Sbjct: 386 HYTFASGSPDNIKQWKF 402
Score = 131 (51.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYK 81
P +++ H+ I+LWD H+ VR + H + F SG D IK W +
Sbjct: 345 PQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPD-NIKQWKFP 403
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-----RNCICVLTGH-- 134
I L GH I T + + ++S +D+ T+ +W+W++ R V G
Sbjct: 404 DGNFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLD 462
Query: 135 -NHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ F ++ +++A D+TI+V+
Sbjct: 463 SESGIFACVFDQSESRLLTAEADKTIKVY 491
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAP------GMGADDRQ 182
V++GH +V C P + V+ S D+TI++WD+ SG K ++ G+ R
Sbjct: 201 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARS 260
Query: 183 IKLWRMNDSK---AWEVD---IFRGHYNNVSCVL---FHPKSEVIVSNAEDKSIRLWDMT 233
L+ + K W+++ + R ++ ++S V HP +V+V+ + D + R+WD+
Sbjct: 261 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 320
Query: 234 KRTCLNT 240
+ ++T
Sbjct: 321 TKASVHT 327
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 40/158 (25%), Positives = 67/158 (42%)
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIV 150
GHL ++R W ++ S D+TI+IW+ S LTGH V +
Sbjct: 204 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYL 263
Query: 151 VSASLDQTIRVWDISG---LRKKN--VAPGMGAD-----DRQIKLWRMNDSKAWEV---- 196
S D+ ++ WD+ +R + ++ G D D + R + ++ W+V
Sbjct: 264 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 323
Query: 197 --DIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
GH N V+ V +V+ + D +IRLWD+
Sbjct: 324 SVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDL 361
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 153 (58.9 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 32/106 (30%), Positives = 54/106 (50%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
++GG D + V++ ++ + + TL GH + + +H + SAS D TIR+W+ N
Sbjct: 239 LTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGN 298
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV 172
C+ V+ H V H T D ++S+S DQ W S ++ V
Sbjct: 299 CVQVVRAHESAVTGLSLHATGDYLLSSSEDQ---YWAFSDIQTGRV 341
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 37/147 (25%), Positives = 65/147 (44%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ ++D R ++ H V + +H Q + S D I+VW+ C+ + H
Sbjct: 247 VVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAH 306
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH--YVMCAQFHPTDDIV 150
+ H ++LS+S+DQ + Q+ + +T + CAQFHP I
Sbjct: 307 ESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIF 366
Query: 151 VSASLDQTIRVWDISGLRKKNVA--PG 175
+ + D I++WD+ + NVA PG
Sbjct: 367 GTGTGDSQIKIWDLK--ERTNVANFPG 391
Score = 124 (48.7 bits), Expect = 0.00042, P = 0.00042
Identities = 35/167 (20%), Positives = 71/167 (42%)
Query: 1 MLTKF--ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
+LTK ET + FHP + + I++WD + T + F H GPV I
Sbjct: 341 VLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIA 400
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDY-IRTTFFHHEYPWILSASDDQTI 117
F +G D +K+W+ ++ K T+ +Y +++ F ++ D I
Sbjct: 401 FSENGYYLATGAQDSSLKLWDLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSD--I 458
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
R++ + + + + H+ V F + S +D++++ + +
Sbjct: 459 RVYICKQWSEVLNFSDHSGLVTGVAFGEHAQFLASTGMDRSLKFYSL 505
Score = 108 (43.1 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 108 ILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
+L+ D+ + +++ + + L GH V +HP +V SAS D TIRVW ++G
Sbjct: 238 VLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTG 296
Score = 102 (41.0 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 175 GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G G D QIK+W + + V F GH V+ + F + + A+D S++LWD+ K
Sbjct: 367 GTGTGDSQIKIWDLKERT--NVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDLRK 424
Score = 92 (37.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF----WSE---VIVSNAE 258
++C FHP + + D I++WD+ +RT + F +SE + + A+
Sbjct: 354 LTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQ 413
Query: 259 DKSIRLWDMTK 269
D S++LWD+ K
Sbjct: 414 DSSLKLWDLRK 424
Score = 70 (29.7 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 22/108 (20%), Positives = 47/108 (43%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+ D I++W + V + R H + V+ + H + ++S++ED+ D+
Sbjct: 284 SSDSTIRVWSVTGGNC--VQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRV 341
Query: 238 LNTFRREQE-------RFWSEVIV--SNAEDKSIRLWDMTKRTCLNTF 276
L E +F + ++ + D I++WD+ +RT + F
Sbjct: 342 LTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANF 389
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 213 (80.0 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 54/254 (21%), Positives = 118/254 (46%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + F P I ++ + + LW + + ++ H+ V + F Q
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+ S D +++W ++ H +R+ F + ++++AS+D++I++W+
Sbjct: 74 LLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYR 133
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMG------ 177
+ + L H H+V CA+F P ++VS S D+TI++WD + + N + +G
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVD 193
Query: 178 -ADDRQIKLWRMNDS--KAWEVDIFR--GHYN----NVSCVLFHPKSEVIVSNAEDKSIR 228
+ + +D + W++ + R HY V+C+ FHP +V+ + D +++
Sbjct: 194 FSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVK 253
Query: 229 LWDMTKRTCLNTFR 242
+ D+ + + T +
Sbjct: 254 ILDLVEGRLIYTLQ 267
Score = 209 (78.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 55/237 (23%), Positives = 100/237 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V L F P+ + S+ + ++LW +F H PVR + F V+ +
Sbjct: 63 VTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASE 122
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IKVW+ +++ +++L H ++R F + I+S S+D+TI+IW+ S+ C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-------------GLRKKNVAPG--- 175
+ + F P + SA D +R+WDI G+ + P
Sbjct: 183 SDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNS 242
Query: 176 --MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+ D +K+ + + + + +GH V V F E+ S D + +W
Sbjct: 243 LVTASSDGTVKILDLVEGRL--IYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 165 (63.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 40/163 (24%), Positives = 77/163 (47%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHN 61
++F+ +A V+ + F +++++ + I++W YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ VS +D IK+W+ ++C+ + + F I SA D +RIW+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWD 214
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ + H+ V C FHP+ + +V+AS D T+++ D+
Sbjct: 215 IRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDL 257
Score = 155 (59.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 43/152 (28%), Positives = 72/152 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
++D+ IK+W M + + ++R H + V C F P +IVS +EDK+I++WD T + C
Sbjct: 121 SEDKSIKVWSMYRQR-FLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQC 178
Query: 238 LNTFRREQERFWSEV--------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
+N F + F + V I S D ++R+WD+ L ++ L H
Sbjct: 179 VNNFS-DSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFH 237
Query: 290 PTLN-LFAAGHDAGMVVFKFERERPAYTVHNN 320
P+ N L A D + + R YT+ +
Sbjct: 238 PSGNSLVTASSDGTVKILDLVEGRLIYTLQGH 269
Score = 141 (54.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ ++LW + D K + F+ H V V F + +V+ +EDKSI++W M ++ L
Sbjct: 81 DKTVRLWVL-DRKGKSSE-FKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLY 138
Query: 240 TFRREQE-----RFWSE--VIVSNAEDKSIRLWDMTKRTCLNTF 276
+ R +F + +IVS +EDK+I++WD T + C+N F
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Score = 139 (54.0 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 46/211 (21%), Positives = 80/211 (37%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ F P I+S + I++WD + F + G + F S G
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGS 206
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D+ +++W+ + + + H + FH +++AS D T++I + I L
Sbjct: 207 DHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTL 266
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS 191
GH V F ++ S D + VW S N R +K + S
Sbjct: 267 QGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSF----NQVHYRDPSKRNLKRLHLEAS 322
Query: 192 KAWEVDIF----RGHYNNVSCVLFHPKSEVI 218
+DI+ GH + + +PK EV+
Sbjct: 323 PHL-LDIYPRTPHGHEDKRETIEINPKLEVM 352
Score = 37 (18.1 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 906 LDRECSPHVLRIDPT-----EFKFKLALINHKYEEV-LH 938
L E SPH+L I P E K + IN K E + LH
Sbjct: 317 LHLEASPHLLDIYPRTPHGHEDKRETIEINPKLEVMDLH 355
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 202 (76.2 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 60/224 (26%), Positives = 113/224 (50%)
Query: 15 LSFHPKRP----WILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVS 68
L HP+ P IL++ L++G I++W+ + LL H+ VR + F N I VS
Sbjct: 112 LRHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVS 171
Query: 69 GGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +++W+ K K I L GHL ++ + + SA+ ++++ +W+ +S
Sbjct: 172 ASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTL 231
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGADDRQIKLW 186
I L GH V+ F P ++V+AS D ++ +WD +G R +++ Q++
Sbjct: 232 IRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSL------HHTQLEA- 284
Query: 187 RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
++DS D+ H +++ V F P+ + + A+D+ +R+W
Sbjct: 285 PVDDS-----DV---HMSSLRSVCFSPEGLYLATVADDRLLRIW 320
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 201 (75.8 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWD---YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+S P + WI +S +G I++W +R+ L F + G + + + S D
Sbjct: 60 VSVSPNKRWIATSSSDGTIKIWSALTFRLECTL--FGHYRG-ISQVKWATGSKYLASASD 116
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D I++W++++R + L GH +Y+ + F+ ++S S D+T+RIWN Q C+ +L
Sbjct: 117 DKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRML 176
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SG 166
H+ ++ + +AS D R+WD+ SG
Sbjct: 177 PAHSEPIISVSISADGTLCATASYDGMARIWDVLSG 212
Score = 176 (67.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 37/115 (32%), Positives = 60/115 (52%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
HE V + + + D IK+W+ + TL GH I + ++
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLA 112
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SASDD+TIRIW+++ R + L GH +YV F+P ++VS S D+T+R+W++
Sbjct: 113 SASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 46/172 (26%), Positives = 73/172 (42%)
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-------------SGLRKKNVAPG 175
C L GH V C P + ++S D TI++W G+ + A G
Sbjct: 48 CTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATG 107
Query: 176 M-----GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+DD+ I++W K V +GH N VS + F+P ++VS + D+++R+W
Sbjct: 108 SKYLASASDDKTIRIWDFE--KRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Query: 231 DMTKRTCLNTFRREQERFWSEVIVSNAE-------DKSIRLWDMTKRTCLNT 275
++ TCL E S I ++ D R+WD+ CL T
Sbjct: 166 NLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKT 217
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
++ S+ + I++WD+ + H V I F+ + VSG D +++WN +
Sbjct: 110 YLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQD 169
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH-NHYVMCA 141
C+ L H + I + + +AS D RIW+ S C+ L N +
Sbjct: 170 GTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNL 229
Query: 142 QFHPTDDIVVSASLDQTIRVWD 163
QF ++ ++L+ IR+WD
Sbjct: 230 QFTENRKYLLVSNLNSQIRLWD 251
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 31/111 (27%), Positives = 54/111 (48%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+ D IK+W + E +F GHY +S V + S+ + S ++DK+IR+WD KR
Sbjct: 73 SSDGTIKIWSALTFRL-ECTLF-GHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCS 130
Query: 238 LNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 281
+ + S ++VS + D+++R+W++ TCL E
Sbjct: 131 VRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSE 181
Score = 70 (29.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 23/109 (21%), Positives = 42/109 (38%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D +++W + D + + H + V + + + D R+WD+
Sbjct: 156 GSWDETVRIWNLQDGTC--LRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQ 213
Query: 237 CLNTFRR------EQERFWSE---VIVSNAEDKSIRLWDMTKRTCLNTF 276
CL T +F ++VSN + IRLWD + + F
Sbjct: 214 CLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQ-IRLWDYRRNRVVRIF 261
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 207 (77.9 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 44 LEKFDEHEGPVRGICFHNQQP-IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
L++F H V + + + V+GG+D+K+ +W + I +L GH I + F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ + + TI++W+ + + LTGH + FHP + S SLD +++W
Sbjct: 69 ASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIW 128
Query: 163 DISGLRKKNVAPGMGADDRQIKLWRM-------------NDSKAWEVDI------FRGHY 203
DI RKK R + + R N K W++ F+ H
Sbjct: 129 DI---RKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHE 185
Query: 204 NNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
+ + FHP ++ + + DK+++ WD+
Sbjct: 186 GKIQSLDFHPHEFLLATGSADKTVKFWDL 214
Score = 204 (76.9 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 36/156 (23%), Positives = 72/156 (46%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S+ + ++F + + +G I+LWD ++ H + FH F S
Sbjct: 59 SSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFAS 118
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
G D +K+W+ +++ CI T GH + F + WI+S +D +++W+ + +
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLL 178
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
H + FHP + ++ + S D+T++ WD+
Sbjct: 179 HEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 214
Score = 173 (66.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GA IKLW + ++K V GH +N V FHP E S + D ++++WD+ K+
Sbjct: 77 GAASGTIKLWDLEEAKV--VRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKG 134
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C++T++ RF + IVS ED +++WD+T L+ F+ + + L H
Sbjct: 135 CIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFH 194
Query: 290 PTLNLFAAG 298
P L A G
Sbjct: 195 PHEFLLATG 203
Score = 170 (64.9 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 2 LTKFETKSARVKGLSFHPKRPWIL-SSLHNGVIQLWDY-RMNTLLEKFDEHEGPVRGICF 59
L +F SA V L K +L + + + LW + N +L + H + + F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYG-HSSGIDSVTF 67
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ + +G IK+W+ ++ K + TL GH + FH + S S D ++I
Sbjct: 68 DASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKI 127
Query: 120 WNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ + + CI GH V +F P +VS D ++VWD++
Sbjct: 128 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT 173
Score = 142 (55.0 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
++FHP + S + +++WD R + + H V + F VSGG+D
Sbjct: 107 VNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNV 166
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
+KVW+ K + H I++ FH HE+ + + S D+T++ W+ ++ I
Sbjct: 167 VKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEF-LLATGSADKTVKFWDLETFELIGSGGT 225
Query: 134 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
V C F+P D V L ++++++ +R
Sbjct: 226 ETTGVRCLTFNP-DGKSVLCGLQESLKIFSWEPIR 259
Score = 124 (48.7 bits), Expect = 0.00084, P = 0.00084
Identities = 32/140 (22%), Positives = 63/140 (45%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D +K+W + K + ++GH V+ + F P IVS ED +++WD+T
Sbjct: 119 GSLDTNLKIWDIR--KKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGK 176
Query: 237 CLNTFRREQERFWS------E-VIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
L+ F+ + + S E ++ + + DK+++ WD+ + + E L +
Sbjct: 177 LLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFN 236
Query: 290 PTLNLFAAGHDAGMVVFKFE 309
P G + +F +E
Sbjct: 237 PDGKSVLCGLQESLKIFSWE 256
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/150 (28%), Positives = 68/150 (45%)
Query: 25 LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRK 84
LS +G ++LWD +F H V + F VS D IK+WN +
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGE 137
Query: 85 CIFTLL---GHLDYIRTTFFHHE--YPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVM 139
C +T+ GH +++ F P I+SAS D+T+++WN Q+ L GH+ Y+
Sbjct: 138 CKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLN 197
Query: 140 CAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
P + S D I +WD++ +K
Sbjct: 198 TVAVSPDGSLCASGGKDGVILLWDLAEGKK 227
Score = 161 (61.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 41/161 (25%), Positives = 76/161 (47%)
Query: 24 ILSSLHNGVIQLW-----DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVW 78
I++S + I LW D + H V+ + + +SG D ++++W
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 79 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW--QSRNCICVLTGHNH 136
+ + +GH + + F + I+SAS D+TI++WN + + I GH
Sbjct: 91 DLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKE 150
Query: 137 YVMCAQFHPTDDI--VVSASLDQTIRVWDISGLRKKNVAPG 175
+V C +F P + +VSAS D+T++VW++ + +N G
Sbjct: 151 WVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAG 191
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 44/181 (24%), Positives = 77/181 (42%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDY--RMNTLLEKFDEHEGPVRGICF-- 59
+F + V ++F I+S+ + I+LW+ + + D H+ V + F
Sbjct: 100 RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSP 159
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ P VS D +KVWN + K TL GH Y+ T + S D I +
Sbjct: 160 NTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILL 219
Query: 120 WNW-QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA 178
W+ + + + G + +C F P + + A+ + +IR+WD L K+V +
Sbjct: 220 WDLAEGKKLYSLEAGSIIHSLC--FSP-NRYWLCAATENSIRIWD---LESKSVVEDLKV 273
Query: 179 D 179
D
Sbjct: 274 D 274
Score = 103 (41.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 29/118 (24%), Positives = 52/118 (44%)
Query: 65 IFVSGGDDYKIKVWNY-KQRKCIFT----LLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ V+ D I +W K+ K + GH +++ + + LS S D +R+
Sbjct: 30 VIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRL 89
Query: 120 WNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG 177
W+ + GH V+ F + +VSAS D+TI++W+ G K ++ G
Sbjct: 90 WDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADG 147
Score = 84 (34.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT--KR-- 235
D+ +K+W + + K GH ++ V P + S +D I LWD+ K+
Sbjct: 172 DKTVKVWNLQNCKLRNT--LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLY 229
Query: 236 -----TCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
+ +++ R+W + A + SIR+WD+ ++ + +
Sbjct: 230 SLEAGSIIHSLCFSPNRYW----LCAATENSIRIWDLESKSVVEDLK 272
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 59/221 (26%), Positives = 112/221 (50%)
Query: 18 HPKRP----WILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGD 71
HP+ P IL++ L++G I++W+ + LL H+ VR + F + I VS
Sbjct: 115 HPQAPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASR 174
Query: 72 DYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +++W+ K K I L GHL ++ + + SA+ ++++ +W+ +S I
Sbjct: 175 DKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRK 234
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGADDRQIKLWRMN 189
L GH V+ F P ++V+AS D ++ +WD +G R +++ Q++ M+
Sbjct: 235 LEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSL------HHTQLEP-TMD 287
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
DS D+ H +++ V F P+ + + A+D+ +R+W
Sbjct: 288 DS-----DV---HMSSLRSVCFSPEGLYLATVADDRLLRIW 320
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 203 (76.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 56/229 (24%), Positives = 96/229 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
FHP + +S + ++LWD + F+ H V +H+ S D K
Sbjct: 402 FHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSK 461
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ +C TL GH D + + F +L++S D+T+ IW+ ++ C L GH H
Sbjct: 462 IWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMH 521
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLR---KKNVAPGMGAD---DRQIKLW---- 186
+ A F P ++ S ++WD L ++ P G + D ++
Sbjct: 522 SINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQAS 581
Query: 187 -----RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+ D K+ E+ GH N V+F E++ S D ++R W
Sbjct: 582 GNGVIHLLDLKSGEIHKLMGHENEAHTVVFSHDGEILFSGGSDGTVRTW 630
Score = 197 (74.4 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 54/215 (25%), Positives = 96/215 (44%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDY 95
+DY++ + F HE PV + + I VS G+D KV + + T GH D+
Sbjct: 340 FDYKLKNI---FRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDW 396
Query: 96 IRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 155
+ FH + ++S D T+++W+ +CI GH+ V +H + V S+SL
Sbjct: 397 LSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSL 456
Query: 156 DQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND----SKA------WEV------DIF 199
D+T ++WD++ R + G I+ + ++ S A W+
Sbjct: 457 DKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSL 516
Query: 200 RGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
GH ++++ +F P+ +I S +LWD K
Sbjct: 517 YGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRK 551
Score = 122 (48.0 bits), Expect = 0.00095, P = 0.00095
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVI 253
GH + +S FHP + + +++ D +++LWD+ K C+ TF WS +
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFV 451
Query: 254 VSNAEDKSIRLWDMTKRTC 272
S++ DK+ ++WD+ C
Sbjct: 452 ASSSLDKTSKIWDVNSERC 470
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 59/227 (25%), Positives = 113/227 (49%)
Query: 18 HPKRP----WILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGD 71
HP+ P +L++ L++G I++W+ + LL H+ VR + F + I VS
Sbjct: 115 HPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASR 174
Query: 72 DYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +++W+ K K I L GHL ++ + + SA+ ++++ +W+ +S I
Sbjct: 175 DKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRK 234
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGADDRQIKLWRMN 189
L GH V+ F P ++V+AS D + +WD +G R +++ Q+ M+
Sbjct: 235 LEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSL------HHTQVDP-AMD 287
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
DS D+ H +++ V F P+ + + A+D+ +R+W + +T
Sbjct: 288 DS-----DV---HISSLRSVCFSPEGLYLATVADDRLLRIWALELKT 326
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 60/227 (26%), Positives = 113/227 (49%)
Query: 18 HPKRP----WILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGD 71
HP+ P IL++ L++G I++W+ + LL H+ VR + F + I VS
Sbjct: 115 HPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASR 174
Query: 72 DYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +++W+ K K I L GHL ++ + + SA+ ++++ +W+ +S I
Sbjct: 175 DKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRK 234
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGADDRQIKLWRMN 189
L GH V+ F P ++V+AS D + +WD +G R +++ Q+ M+
Sbjct: 235 LEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSL------HHTQLSP-PMD 287
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
DS D+ H +++ V F P+ + + A+D+ +R+W + +T
Sbjct: 288 DS-----DV---HISSLRSVCFSPEGLYLATVADDRLLRIWALELKT 326
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 36/148 (24%), Positives = 74/148 (50%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
+++ P +I S +G+I ++D +++ + H PVR +CF + ++ DD
Sbjct: 176 IAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGH 235
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
+K+++ + TL GH ++ F + S+S D +++IW+ R C+ H
Sbjct: 236 MKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEH 295
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVW 162
V ++ P +D V SAS D+++ ++
Sbjct: 296 TDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 158 (60.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 37/152 (24%), Positives = 70/152 (46%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR-GICFHNQQPIFVSGGDDY 73
+ F P +++S L++G I ++ + D G I + SG D
Sbjct: 133 VQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDG 192
Query: 74 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
I +++ K + TL GH +R+ F +L+ASDD +++++ + + L+G
Sbjct: 193 IITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSG 252
Query: 134 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
H +V+C F S+S D ++++WD S
Sbjct: 253 HASWVLCVAFSEDGKHFASSSSDNSVKIWDTS 284
Score = 131 (51.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD +KL+ + S V GH + V CV F + S++ D S+++WD ++R C
Sbjct: 231 SDDGHMKLYDVTHSDV--VGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKC 288
Query: 238 LNTFRREQERFW-------SEVIVSNAEDKSIRLW 265
L+TF ++ W ++ + S +EDKS+ ++
Sbjct: 289 LHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 127 (49.8 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 27/109 (24%), Positives = 52/109 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ L F P +L++ +G ++L+D + ++ H V + F F S
Sbjct: 215 VRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSS 274
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
D +K+W+ +RKC+ T H D + + + SAS+D+++ I+
Sbjct: 275 DNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 72 (30.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 107 WILSASDDQTIRIWNWQSRNCICV---LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
++++ D +++W+ Q N + + L GH V+ + S+SLD T+ +WD
Sbjct: 54 FLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWD 113
Query: 164 ISGLRKKNV 172
KK++
Sbjct: 114 ARSGDKKHL 122
Score = 72 (30.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 25/101 (24%), Positives = 48/101 (47%)
Query: 67 VSGGDDYKIKVWNYKQRKCI---FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
V+GG D +KVW+ ++ + L GH + + + I S+S D T+ +W+ +
Sbjct: 56 VTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDAR 115
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S + +L+ + QF P + V+S D I ++ +
Sbjct: 116 SGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSV 156
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/226 (25%), Positives = 109/226 (48%)
Query: 18 HPKRP----WILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGD 71
HP+ P IL++ L++G I++W+ + LL H+ VR + F + I VS
Sbjct: 117 HPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASR 176
Query: 72 DYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +++W+ K K I L GHL ++ + + SA+ ++++ +W+ +S I
Sbjct: 177 DKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRK 236
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
L GH V+ F P ++V+AS D + +WD P G R + ++N
Sbjct: 237 LEGHQSSVVSCDFSPDSALLVTASYDTNVIMWD----------PYTGERLRSLHHTQLNP 286
Query: 191 SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
+ D+ H +++ V F P+ + + A+D+ +R+W + +T
Sbjct: 287 PMD-DSDV---HISSLRSVCFSPEGLYLATVADDRLLRIWALELKT 328
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 59/227 (25%), Positives = 113/227 (49%)
Query: 18 HPKRP----WILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGD 71
HP+ P +L++ L++G I++W+ + LL H+ VR + F + I VS
Sbjct: 117 HPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASR 176
Query: 72 DYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +++W+ K K I L GHL ++ + + SA+ ++++ +W+ +S I
Sbjct: 177 DKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRK 236
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGADDRQIKLWRMN 189
L GH V+ F P ++V+AS D + +WD +G R +++ Q+ M+
Sbjct: 237 LEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSL------HHTQVDP-AMD 289
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
DS D+ H +++ V F P+ + + A+D+ +R+W + +T
Sbjct: 290 DS-----DV---HISSLRSVCFSPEGLYLATVADDRLLRIWALELKT 328
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 198 (74.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 65/308 (21%), Positives = 128/308 (41%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ E + + F P ++ +S + +++W+ H+ V I +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ VS DD +K++ + TL GH +Y+ F+ + ++S S D+++RIW
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
+ ++ CI L H+ V F+ ++ S S D +R+WD A+
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDT-------------ANG 245
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ IK ++D V+ V F P + I+++ D +++LWD +K L
Sbjct: 246 QCIKTL-VDDENP-----------PVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQ 293
Query: 241 FR-REQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
+ E ++ + I+S +ED I +W++ R + + HP
Sbjct: 294 YTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHP 353
Query: 291 TLNLFAAG 298
N+ A+G
Sbjct: 354 VQNIIASG 361
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 44/157 (28%), Positives = 75/157 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V +SF+ I S ++G++++WD ++ D+ PV + F ++
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASN 275
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W++ + K + GH + Y I F WI+S S+D I IWN Q+R
Sbjct: 276 LDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREI 335
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ + HP +I+ S +L D I +W
Sbjct: 336 VQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/178 (26%), Positives = 75/178 (42%)
Query: 79 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYV 138
NYK C TL GH I + F ++ ++S D+T++IWN C LTGH V
Sbjct: 76 NYKLM-C--TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 139 MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMN 189
+ VVSAS D+T+++++I R G + +
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFD 192
Query: 190 DS-KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+S + W+V H + VS V F+ +I S + D +R+WD C+ T
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 198 (74.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 65/308 (21%), Positives = 128/308 (41%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ E + + F P ++ +S + +++W+ H+ V I +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ VS DD +K++ + TL GH +Y+ F+ + ++S S D+++RIW
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
+ ++ CI L H+ V F+ ++ S S D +R+WD A+
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDT-------------ANG 245
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ IK ++D V+ V F P + I+++ D +++LWD +K L
Sbjct: 246 QCIKTL-VDDENP-----------PVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQ 293
Query: 241 FR-REQERFW---------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
+ E ++ + I+S +ED I +W++ R + + HP
Sbjct: 294 YTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHP 353
Query: 291 TLNLFAAG 298
N+ A+G
Sbjct: 354 VQNIIASG 361
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 44/157 (28%), Positives = 75/157 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGG 70
V +SF+ I S ++G++++WD ++ D+ PV + F ++
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASN 275
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D +K+W++ + K + GH + Y I F WI+S S+D I IWN Q+R
Sbjct: 276 LDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREI 335
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 162
+ L GH V+ + HP +I+ S +L D I +W
Sbjct: 336 VQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/178 (26%), Positives = 75/178 (42%)
Query: 79 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYV 138
NYK C TL GH I + F ++ ++S D+T++IWN C LTGH V
Sbjct: 76 NYKLM-C--TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 139 MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG---------MGADDRQIKLWRMN 189
+ VVSAS D+T+++++I R G + +
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFD 192
Query: 190 DS-KAWEVDI------FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+S + W+V H + VS V F+ +I S + D +R+WD C+ T
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
>UNIPROTKB|P40765 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0005179 "hormone activity" evidence=IEA]
eggNOG:COG2319 PIR:A60412 STRING:P40765 Uniprot:P40765
Length = 35
Score = 179 (68.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 34/35 (97%), Positives = 35/35 (100%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQL 35
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQL
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQL 35
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 203 (76.5 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 40/142 (28%), Positives = 69/142 (48%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
W ++ ++ +++WD L H VR + ++ P S +D +K W+ ++
Sbjct: 154 WFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEK 213
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
+ I GHL +RT H I +A D I++W+ ++R + L GH + Q
Sbjct: 214 NQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQ 273
Query: 143 FHPTDDIVVSASLDQTIRVWDI 164
P D VVS+S D T+R+WD+
Sbjct: 274 CTPVDPQVVSSSTDATVRLWDV 295
Score = 200 (75.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 61/255 (23%), Positives = 110/255 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ + P++ S + ++ WD N ++ + H VR + H + + G
Sbjct: 185 VRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGR 244
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D IK+W+ + R + TL+GH I P ++S+S D T+R+W+ + + VL
Sbjct: 245 DSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVL 304
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS 191
T H V HP + V SA D IR W GL + ++ ++ I +N
Sbjct: 305 THHKRSVRATALHPKEFSVASACTDD-IRSW---GLAEGSLLTNFESEKTGI----INTL 356
Query: 192 KAWEVDI-FRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS 250
+ D+ F G N V + S A + + + + +TF + R
Sbjct: 357 SINQDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLR--- 413
Query: 251 EVIVSNAEDKSIRLW 265
+++ DKSI++W
Sbjct: 414 --LITGEADKSIKIW 426
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 130 VLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG-------MGADDR 181
V+ GH +V C P D + ++ S D T++VWD++ + K G + DR
Sbjct: 134 VINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDR 193
Query: 182 QIKLWRMNDSKA---WEVD---IFR---GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
L+ +++ K W+++ I R GH + V V HP ++I + D I+LWDM
Sbjct: 194 HPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDM 253
Query: 233 TKR 235
R
Sbjct: 254 RTR 256
Score = 40 (19.1 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 177 GADDRQIKLWRMNDSKAWE 195
G D+ IK+W+ +++ E
Sbjct: 417 GEADKSIKIWKQDETATKE 435
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 194 (73.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 37/158 (23%), Positives = 76/158 (48%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
+T+ + +++ P ++ S +G+I ++D LL + H P+R + F +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQL 204
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ F + +S+S D+++++W+ +R
Sbjct: 205 LVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSAR 264
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
C+ H V +++ +VS DQ I V+D
Sbjct: 265 TCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 164 (62.8 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 40/151 (26%), Positives = 71/151 (47%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
++F P + + H G + ++ D + I + SG D
Sbjct: 112 VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
I +++ K + TL GH IR+ F + +++ASDD I+I++ Q + L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGH 231
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
+V+ F P D VS+S D++++VWD+S
Sbjct: 232 GSWVLNVAFSPDDAHFVSSSSDKSVKVWDVS 262
Score = 138 (53.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 30/121 (24%), Positives = 56/121 (46%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E + ++ L+F ++++ +G I+++D + +L H V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFS 241
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
FVS D +KVW+ R C+ T L H D + ++ I+S DDQ I ++
Sbjct: 242 PDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Query: 121 N 121
+
Sbjct: 302 D 302
Score = 138 (53.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 51/226 (22%), Positives = 100/226 (44%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
I S D I++W+ + K I ++ G +D + F + + + S + I+ +
Sbjct: 78 IMASSSLDAHIRLWDLESGKQIRSIDAGPVD-AWSVAFSPDSQHLATGSHVGKVNIFGVE 136
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG------ 177
+ L +++ + P + S ++D I ++DI+ + + G
Sbjct: 137 TGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 178 --ADDRQIKLWRMNDS--KAWEVD------IFRGHYNNVSCVLFHPKSEVIVSNAEDKSI 227
+ D Q+ + +D K ++V GH + V V F P VS++ DKS+
Sbjct: 197 TFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSV 256
Query: 228 RLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
++WD++ RTC++TF Q++ W IVS +D+ I ++D
Sbjct: 257 KVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 110 (43.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 28/115 (24%), Positives = 57/115 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GA D I ++ + K + GH + + F S+++V+ ++D I+++D+ +
Sbjct: 166 GAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHAS 223
Query: 237 CLNTFRREQERFWSEVI-------VSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
T + VS++ DKS+++WD++ RTC++TF Q++ W
Sbjct: 224 LAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVW 278
Score = 105 (42.0 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 108 ILSASDDQTIRIWNWQSRNCIC--VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI- 164
++S S D +++W W L GH V+ P+ +I+ S+SLD IR+WD+
Sbjct: 35 VISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLE 94
Query: 165 SGLRKKNVAPG 175
SG + +++ G
Sbjct: 95 SGKQIRSIDAG 105
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 59/227 (25%), Positives = 113/227 (49%)
Query: 18 HPKRP----WILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGD 71
HP+ P +L++ L++G I++W+ + LL H+ VR + F + I VS
Sbjct: 132 HPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASR 191
Query: 72 DYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +++W+ K K I L GHL ++ + + SA+ ++++ +W+ +S I
Sbjct: 192 DKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRK 251
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGADDRQIKLWRMN 189
L GH V+ F P ++V+AS D + +WD +G R +++ Q+ M+
Sbjct: 252 LEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSL------HHTQVDP-AMD 304
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
DS D+ H +++ V F P+ + + A+D+ +R+W + +T
Sbjct: 305 DS-----DV---HISSLRSVCFSPEGLYLATVADDRLLRIWALELKT 343
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 193 (73.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 37/158 (23%), Positives = 76/158 (48%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
+T+ + +++ P ++ S +G+I ++D LL + H P+R + F +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V+ DD IK++ + TL GH ++ F + +S+S D+++++W+ +R
Sbjct: 205 LVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSAR 264
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
C+ H V +++ +VS + DQ I V+D
Sbjct: 265 TCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 164 (62.8 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
++F P + + H G + ++ D + I + SG D
Sbjct: 112 VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
I +++ K + TL GH IR+ F + +++ASDD I+I+ Q + L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGH 231
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
+V+ F P D VS+S D++++VWD+S
Sbjct: 232 GSWVLNVAFSPDDTHFVSSSSDKSVKVWDVS 262
Score = 146 (56.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 59/256 (23%), Positives = 110/256 (42%)
Query: 36 W-DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL-LGHL 93
W D R+ L + H+ V + I S D I++W+ + K I + G +
Sbjct: 49 WSDERLE-LQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPV 107
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
D + F + + + S + I+ ++ L +++ + P + S
Sbjct: 108 D-AWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 154 SLDQTIRVWDISGLRKKNVAPGMG--------ADDRQIKLWRMNDS--KAWEVD------ 197
++D I ++DI+ + + G + D Q+ + +D K +EV
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAA 226
Query: 198 IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS------- 250
GH + V V F P VS++ DKS+++WD++ RTC++TF Q++ W
Sbjct: 227 TLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNG 286
Query: 251 EVIVSNAEDKSIRLWD 266
IVS A+D+ I ++D
Sbjct: 287 SKIVSVADDQEIHVYD 302
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E + ++ L+F P ++++ +G I++++ + +L H V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFS 241
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
FVS D +KVW+ R C+ T L H D + ++ I+S +DDQ I ++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Query: 121 N 121
+
Sbjct: 302 D 302
Score = 114 (45.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 28/115 (24%), Positives = 58/115 (50%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GA D I ++ + K + GH + + F P S+++V+ ++D I+++++ +
Sbjct: 166 GAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHAS 223
Query: 237 CLNTFRREQERFWSEVI-------VSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
T + VS++ DKS+++WD++ RTC++TF Q++ W
Sbjct: 224 LAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVW 278
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 108 ILSASDDQTIRIWNWQSRNCIC--VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI- 164
++S S D +++W W L GH V+ P+ +I+ S+SLD IR+WD+
Sbjct: 35 VISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLE 94
Query: 165 SGLRKKNVAPG 175
SG + + + G
Sbjct: 95 SGKQIRAIDAG 105
Score = 55 (24.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIF--TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
+ +SG D +KVW + + TL GH + + + S+S D IR+W+
Sbjct: 34 LVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDL 93
Query: 123 QS 124
+S
Sbjct: 94 ES 95
Score = 49 (22.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 148 DIVVSASLDQTIRVWDISGLR 168
++V+S SLD ++VW S R
Sbjct: 33 ELVISGSLDDLVKVWKWSDER 53
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 195 (73.7 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 66/275 (24%), Positives = 118/275 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
FHP + S+ + +I LW+ Y H G V + ++ + S D +
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 134
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRNCICVLTGH 134
VW+ + + + L GH ++ + + P ++ + SDD T+++W+ + + V T
Sbjct: 135 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK--AAVQTFQ 192
Query: 135 NHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKA 193
N Y V+ F+ T D ++S +D I+VWD+ RQ KL
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL----------------RQNKL-------- 228
Query: 194 WEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF- 248
RGH ++V+ + + ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 229 --TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 249 -------WS---EVIVSNAEDKSIRLWDMTKRTCL 273
WS I + + D+ + +WD T R L
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVL 321
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDD 72
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG D
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGID 215
Query: 73 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ----SRNCI 128
IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W+ + C+
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 129 CVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
+ G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 276 KIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPG 326
Score = 174 (66.3 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 56/203 (27%), Positives = 90/203 (44%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWI 108
HEG V FH S G D I +WN Y TL GH + ++ + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYV-MCAQFHPTDDIVVSASLDQTIRVWDISGL 167
SAS D+T+ +W+ ++ + L GH +V C +V + S D T+++WDI
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI--- 182
Query: 168 RKK-------NVAPGMGA-----DDRQIKLWRMNDSKAWEVD------IFRGHYNNVSCV 209
RKK N + D+ I ND K W++ RGH ++V+ +
Sbjct: 183 RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 210 LFHPKSEVIVSNAEDKSIRLWDM 232
+ ++SNA D ++R+WD+
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDV 265
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+V ++F+ I+S + I++WD R N L H V G+ ++ +S
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 71 DDYKIKVWNYK----QRKCIFTLLGHLDYIRTTFFHHEY-P---WILSASDDQTIRIWNW 122
D ++VW+ + + +C+ G++ + P I + S D+ + +W+
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR + L GH + FHP + I++SAS D+ + + +I
Sbjct: 316 TSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 137 (53.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 34/158 (21%), Positives = 69/158 (43%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ-PIFV 67
S V L ++ + S+ + + +WD +++ H V C+ ++ P V
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLV 168
Query: 68 -SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
+G DD +K+W+ +++ + T + TF + I+S D I++W+ +
Sbjct: 169 CTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTF-NDTSDQIISGGIDNDIKVWDLRQNK 227
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ GH V ++S ++D T+RVWD+
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 124 (48.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD +KLW + A V F+ Y V V F+ S+ I+S D I++WD+ +
Sbjct: 171 GSDDGTVKLWDIRKKAA--VQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Query: 237 CLNTFRREQERFW-----SE--VIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF 283
T R + SE ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
Score = 101 (40.6 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 29/90 (32%), Positives = 43/90 (47%)
Query: 86 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC--ICVLTGHNHYVMCAQF 143
I L GH + FH + SA D+ I +WN +C L GH+ VM +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 118
Query: 144 HPTDDIVVSASLDQTIRVWDI-SGLRKKNV 172
+ ++ SAS D+T+ VWD +G R K +
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRL 148
Score = 67 (28.6 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFR--GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
G+ DR + +W D+ + V +++ GH +++ V FHP +I+S + DK + + ++
Sbjct: 304 GSADRFVYVW---DTTSRRV-LYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 201 (75.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 71/292 (24%), Positives = 120/292 (41%)
Query: 54 VRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+ + H + I SG I++ N L GH + + H ++S S
Sbjct: 354 ITSLLLHKDRIITTSGSGT--IQIHNAITGVLEARLEGHKEGVWAVKIHENT--LVSGSI 409
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQF--------H------PTDDIVVSASLDQTI 159
D+T+R+WN + C + GH + C + H P +VS S D T+
Sbjct: 410 DKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTL 469
Query: 160 RVWDISGLRKKNVAPGMGADD-RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
RVW + KN P D+ I W N + V GH ++V + + +++
Sbjct: 470 RVWKLP----KNTDPPYLPDNTNSIDRWEKNP---YFVHTLIGHTDSVRTISGY--GDIL 520
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRT 271
VS + D SIR+W ++ CL R R +S + +S + DKSIR+WD++ T
Sbjct: 521 VSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGT 580
Query: 272 CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMY 323
C + F L+ L + D+ + ++ +P + +N Y
Sbjct: 581 CKYVLEGH-DAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGY 631
Score = 170 (64.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 55/205 (26%), Positives = 91/205 (44%)
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
N P ++ + I W K + TL+GH D +RT + + ++S S D +IRIW
Sbjct: 477 NTDPPYLPDNTN-SIDRWE-KNPYFVHTLIGHTDSVRTISGYGDI--LVSGSYDSSIRIW 532
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----- 175
+ C+ L GH+ + + P +I +S S+D++IRVWD+S K V G
Sbjct: 533 RVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFV 592
Query: 176 -----------MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAED 224
G+ D I++W +N K V Y +S + + ++I N D
Sbjct: 593 TLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGY--ISSFV-SDEHKIISGN--D 647
Query: 225 KSIRLWDMTKRTCLNTFRREQERFW 249
S++LWD+ L + + W
Sbjct: 648 GSVKLWDVRTGKLLRFLLTDLTKIW 672
Score = 166 (63.5 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 33 IQLWD---YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL 89
I W+ Y ++TL+ H VR I + I VSG D I++W +C++ L
Sbjct: 490 IDRWEKNPYFVHTLIG----HTDSVRTISGYGD--ILVSGSYDSSIRIWRVSTGECLYHL 543
Query: 90 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDI 149
GH I + + E +S S D++IR+W+ + C VL GH+ +V +
Sbjct: 544 RGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVF--QNR 601
Query: 150 VVSASLDQTIRVWDISGLRKKNVAP 174
++S S D TIR+WD++ + V P
Sbjct: 602 LISGSADSTIRIWDLNTGKPLMVLP 626
Score = 141 (54.7 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 33/141 (23%), Positives = 69/141 (48%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR 83
++S ++ I++W L H + + + ++ I +SG D I+VW+
Sbjct: 520 LVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTG 579
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
C + L GH ++ T + ++S S D TIRIW+ + + VL ++ Y+ + F
Sbjct: 580 TCKYVLEGHDAFV--TLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYI--SSF 635
Query: 144 HPTDDIVVSASLDQTIRVWDI 164
+ ++S + D ++++WD+
Sbjct: 636 VSDEHKIISGN-DGSVKLWDV 655
Score = 43 (20.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 19 PKRPWILSSLHNGVIQLWDYRMNT 42
P +P+I+S + +++W NT
Sbjct: 455 PDQPYIVSGSRDHTLRVWKLPKNT 478
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 200 (75.5 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 55/218 (25%), Positives = 98/218 (44%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V +F P ++LSS + I+LW ++N L + H PV F F S
Sbjct: 418 SGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFAS 477
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D ++W+ + + + + GHL + +H +I + S D+T+R+W+ Q+ C+
Sbjct: 478 CSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECV 537
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM 188
+ GH V+ P + S D TI +WD+S R + P MG + +W +
Sbjct: 538 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARC--ITPLMGHNSC---VWSL 592
Query: 189 NDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
S + E + + + L+ S ++ AE+K+
Sbjct: 593 --SYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKN 628
Score = 183 (69.5 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 52/186 (27%), Positives = 83/186 (44%)
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ-SRNCICVLTGHNHYVMCA 141
R+ LLGH + + F ++LS+S D TIR+W+ + + N +C GHN+ V A
Sbjct: 408 RRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCY-KGHNYPVWDA 466
Query: 142 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMN---------DS- 191
QF P S S D+T R+W + ++ + G +D ++ W N D
Sbjct: 467 QFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ-WHPNCNYIATGSSDKT 525
Query: 192 -KAWEVD------IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRRE 244
+ W+V IF GH + V + P + S ED +I +WD++ C+
Sbjct: 526 VRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGH 585
Query: 245 QERFWS 250
WS
Sbjct: 586 NSCVWS 591
Score = 180 (68.4 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/205 (24%), Positives = 89/205 (43%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H GPV F +S D I++W+ K + GH + F +
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFA 476
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS---- 165
S S D+T RIW+ + ++ GH V C Q+HP + + + S D+T+R+WD+
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGEC 536
Query: 166 -----GLRKKNVAPGMGADDRQIKLWRMNDS-KAWEVDIFR------GHYNNVSCVLFHP 213
G R ++ M D R + + + W++ R GH + V + +
Sbjct: 537 VRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSG 596
Query: 214 KSEVIVSNAEDKSIRLWDMTKRTCL 238
+ ++ S + D +++LWD+T T L
Sbjct: 597 EGSLLASGSADCTVKLWDVTSSTKL 621
Score = 174 (66.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 40/190 (21%), Positives = 79/190 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
F P + S H+ ++W L H V + +H +G D ++
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVR 527
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+W+ + +C+ +GH + + + ++ S +D TI +W+ + CI L GHN
Sbjct: 528 LWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNS 587
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEV 196
V + ++ S S D T+++WD++ K A + +++ R +K+ V
Sbjct: 588 CVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPV 647
Query: 197 DIFRGHYNNV 206
R N+
Sbjct: 648 HALRFSRRNL 657
Score = 150 (57.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
L A +D + + R +L GH+ V A F P D V+S+S D TIR+W S
Sbjct: 392 LQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLW--STKL 449
Query: 169 KKNVAPGMGAD----DRQIKLWR------MNDSKA--WEVD------IFRGHYNNVSCVL 210
N+ G + D Q + +D A W +D I GH ++V CV
Sbjct: 450 NANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ 509
Query: 211 FHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
+HP I + + DK++RLWD+ C+ F
Sbjct: 510 WHPNCNYIATGSSDKTVRLWDVQTGECVRIF 540
Score = 149 (57.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 34/126 (26%), Positives = 57/126 (45%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
DR ++W M+ + + I GH ++V CV +HP I + + DK++RLWD+ C+
Sbjct: 481 DRTARIWSMD--RIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVR 538
Query: 240 TFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
F + S + S ED +I +WD++ C+ W L
Sbjct: 539 IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEG 598
Query: 293 NLFAAG 298
+L A+G
Sbjct: 599 SLLASG 604
Score = 38 (18.4 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 20/59 (33%), Positives = 26/59 (44%)
Query: 24 ILSSLHNGVIQLWDYRMNTL-LEKF-DEHEGPVRGICFHNQQPIFVSGG-DDYKIKVWN 79
IL L N V QL M ++ F + H G H+ V+GG D IKVW+
Sbjct: 325 ILEDLRNRV-QLSSVAMPSVSFYTFVNTHNGLNCSSISHDGS--LVAGGFSDSSIKVWD 380
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 198 (74.8 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 52/242 (21%), Positives = 103/242 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++ W + + I++WD L H +RG+ ++ P S G+
Sbjct: 210 VRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGE 269
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D K+ W+ + K + GH + + H + S D +R+W+ ++R I +
Sbjct: 270 DNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEM 329
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL-------RKKNVAPGMGADDRQI 183
GH ++ + D V+S S+D T+++WD++ G KK V M +++
Sbjct: 330 KGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVR-SMVIHEKEY 388
Query: 184 KL--WRMNDSKAWE------VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
++ K W+ + GH + ++ + + + V+VS ++ SI WD
Sbjct: 389 SFATGAADNIKQWKCPDGSFIKNLSGHNSIINAMALNADN-VLVSGGDNGSISFWDWKTG 447
Query: 236 TC 237
C
Sbjct: 448 YC 449
Score = 176 (67.0 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 37/122 (30%), Positives = 54/122 (44%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
L+ H G VR I F +G D IKVW+ + TL GH+ IR
Sbjct: 199 LMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVS 258
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+P++ S +D + W+ +S + GH V HPT D++ S D +RVW
Sbjct: 259 SRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVW 318
Query: 163 DI 164
D+
Sbjct: 319 DM 320
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 42/162 (25%), Positives = 71/162 (43%)
Query: 150 VVSASLDQTI--RVWDISGLRKKNVAPGMGA--DDRQIKLWRMNDSKAWEVDIFRGHYNN 205
+ S L T+ V I GL + P + + +D ++ W + +K +V + GH
Sbjct: 236 LASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNK--QVRNYYGHRQG 293
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER-----FWSE----VIVSN 256
V V HP +V+ S D +R+WDM RT N F + + S+ ++S
Sbjct: 294 VYSVALHPTLDVLFSGGRDNCVRVWDM--RTRANIFEMKGHKGTILSLKSQNADPQVISG 351
Query: 257 AEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
+ D +++LWD+ T T ++ +V H FA G
Sbjct: 352 SMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATG 393
Score = 68 (29.0 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 26/117 (22%), Positives = 44/117 (37%)
Query: 164 ISGLRKKNVAPGM--GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN 221
I L+ +N P + G+ D +KLW + + H V ++ H K +
Sbjct: 336 ILSLKSQNADPQVISGSMDTTVKLWDL--ATGTSAATLTNHKKGVRSMVIHEKEYSFATG 393
Query: 222 AEDKSIRLWDMTKRTCL------NTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTC 272
A D +I+ W + + N+ V+VS ++ SI WD C
Sbjct: 394 AAD-NIKQWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGDNGSISFWDWKTGYC 449
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 194 (73.4 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 66/275 (24%), Positives = 118/275 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
FHP + S+ + +I LW+ Y H G V + ++ + S D +
Sbjct: 74 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 133
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRNCICVLTGH 134
VW+ + + + L GH ++ + + P ++ + SDD T+++W+ + + I T
Sbjct: 134 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQ 191
Query: 135 NHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKA 193
N Y V+ F+ T D ++S +D I+VWD+ RQ KL
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL----------------RQNKL-------- 227
Query: 194 WEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF- 248
RGH ++V+ + + ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 228 --TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 249 -------WS---EVIVSNAEDKSIRLWDMTKRTCL 273
WS I + + D+ + +WD T R L
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL 320
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDD 72
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG D
Sbjct: 156 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 214
Query: 73 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ----SRNCI 128
IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W+ + C+
Sbjct: 215 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 129 CVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
+ G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 275 KIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 325
Score = 175 (66.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 53/200 (26%), Positives = 91/200 (45%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWI 108
HEG V FH S G D I +WN Y TL GH + ++ + +
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 124
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYV-MCAQFHPTDDIVVSASLDQTIRVWDI--- 164
SAS D+T+ +W+ ++ + L GH +V C +V + S D T+++WDI
Sbjct: 125 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 184
Query: 165 SGLRK-KNVAPGMGA-----DDRQIKLWRMNDSKAWEVD------IFRGHYNNVSCVLFH 212
+ ++ +N + D+ I ND K W++ RGH ++V+ +
Sbjct: 185 AAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLS 244
Query: 213 PKSEVIVSNAEDKSIRLWDM 232
+ ++SNA D ++R+WD+
Sbjct: 245 SEGSYLLSNAMDNTVRVWDV 264
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+V ++F+ I+S + I++WD R N L H V G+ ++ +S
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 254
Query: 71 DDYKIKVWNYK----QRKCIFTLLGHLDYIRTTFFHHEY-P---WILSASDDQTIRIWNW 122
D ++VW+ + + +C+ G++ + P I + S D+ + +W+
Sbjct: 255 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR + L GH + FHP + I++SAS D+ + + +I
Sbjct: 315 TSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Score = 138 (53.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 35/158 (22%), Positives = 69/158 (43%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ-PIFV 67
S V L ++ + S+ + + +WD +++ H V C+ ++ P V
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLV 167
Query: 68 -SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
+G DD +K+W+ +++ I T + TF + I+S D I++W+ +
Sbjct: 168 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF-NDTSDQIISGGIDNDIKVWDLRQNK 226
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ GH V ++S ++D T+RVWD+
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 123 (48.4 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD +KLW + A + F+ Y V V F+ S+ I+S D I++WD+ +
Sbjct: 170 GSDDGTVKLWDIRKKAA--IQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 226
Query: 237 CLNTFRREQERFW-----SE--VIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF 283
T R + SE ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 284
Score = 101 (40.6 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 29/90 (32%), Positives = 43/90 (47%)
Query: 86 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC--ICVLTGHNHYVMCAQF 143
I L GH + FH + SA D+ I +WN +C L GH+ VM +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 117
Query: 144 HPTDDIVVSASLDQTIRVWDI-SGLRKKNV 172
+ ++ SAS D+T+ VWD +G R K +
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRL 147
Score = 68 (29.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFR--GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
G+ DR + +W D+ + + +++ GH +++ V FHP +I+S + DK + + ++
Sbjct: 303 GSADRFVYVW---DTTSRRI-LYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 194 (73.4 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 66/275 (24%), Positives = 118/275 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
FHP + S+ + +I LW+ Y H G V + ++ + S D +
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 134
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRNCICVLTGH 134
VW+ + + + L GH ++ + + P ++ + SDD T+++W+ + + I T
Sbjct: 135 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQ 192
Query: 135 NHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKA 193
N Y V+ F+ T D ++S +D I+VWD+ RQ KL
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL----------------RQNKL-------- 228
Query: 194 WEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF- 248
RGH ++V+ + + ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 229 --TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 249 -------WS---EVIVSNAEDKSIRLWDMTKRTCL 273
WS I + + D+ + +WD T R L
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL 321
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDD 72
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG D
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 215
Query: 73 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ----SRNCI 128
IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W+ + C+
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 129 CVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
+ G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 276 KIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 326
Score = 175 (66.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 53/200 (26%), Positives = 91/200 (45%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWI 108
HEG V FH S G D I +WN Y TL GH + ++ + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYV-MCAQFHPTDDIVVSASLDQTIRVWDI--- 164
SAS D+T+ +W+ ++ + L GH +V C +V + S D T+++WDI
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 185
Query: 165 SGLRK-KNVAPGMGA-----DDRQIKLWRMNDSKAWEVD------IFRGHYNNVSCVLFH 212
+ ++ +N + D+ I ND K W++ RGH ++V+ +
Sbjct: 186 AAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLS 245
Query: 213 PKSEVIVSNAEDKSIRLWDM 232
+ ++SNA D ++R+WD+
Sbjct: 246 SEGSYLLSNAMDNTVRVWDV 265
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+V ++F+ I+S + I++WD R N L H V G+ ++ +S
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 71 DDYKIKVWNYK----QRKCIFTLLGHLDYIRTTFFHHEY-P---WILSASDDQTIRIWNW 122
D ++VW+ + + +C+ G++ + P I + S D+ + +W+
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR + L GH + FHP + I++SAS D+ + + +I
Sbjct: 316 TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 138 (53.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 35/158 (22%), Positives = 69/158 (43%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ-PIFV 67
S V L ++ + S+ + + +WD +++ H V C+ ++ P V
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLV 168
Query: 68 -SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
+G DD +K+W+ +++ I T + TF + I+S D I++W+ +
Sbjct: 169 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF-NDTSDQIISGGIDNDIKVWDLRQNK 227
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ GH V ++S ++D T+RVWD+
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 123 (48.4 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD +KLW + A + F+ Y V V F+ S+ I+S D I++WD+ +
Sbjct: 171 GSDDGTVKLWDIRKKAA--IQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Query: 237 CLNTFRREQERFW-----SE--VIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF 283
T R + SE ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
Score = 101 (40.6 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 29/90 (32%), Positives = 43/90 (47%)
Query: 86 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC--ICVLTGHNHYVMCAQF 143
I L GH + FH + SA D+ I +WN +C L GH+ VM +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 118
Query: 144 HPTDDIVVSASLDQTIRVWDI-SGLRKKNV 172
+ ++ SAS D+T+ VWD +G R K +
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRL 148
Score = 66 (28.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFR--GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
G+ DR + +W D+ + + +++ GH +++ V FHP +I+S + DK + + ++
Sbjct: 304 GSADRFVYVW---DTTSRRI-LYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 194 (73.4 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 66/275 (24%), Positives = 118/275 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
FHP + S+ + +I LW+ Y H G V + ++ + S D +
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 134
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRNCICVLTGH 134
VW+ + + + L GH ++ + + P ++ + SDD T+++W+ + + I T
Sbjct: 135 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQ 192
Query: 135 NHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKA 193
N Y V+ F+ T D ++S +D I+VWD+ RQ KL
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL----------------RQNKL-------- 228
Query: 194 WEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF- 248
RGH ++V+ + + ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 229 --TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFE 286
Query: 249 -------WS---EVIVSNAEDKSIRLWDMTKRTCL 273
WS I + + D+ + +WD T R L
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL 321
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDD 72
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG D
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 215
Query: 73 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ----SRNCI 128
IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W+ + C+
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 129 CVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
+ G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 276 RIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 326
Score = 175 (66.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 53/200 (26%), Positives = 91/200 (45%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWI 108
HEG V FH S G D I +WN Y TL GH + ++ + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYV-MCAQFHPTDDIVVSASLDQTIRVWDI--- 164
SAS D+T+ +W+ ++ + L GH +V C +V + S D T+++WDI
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 185
Query: 165 SGLRK-KNVAPGMGA-----DDRQIKLWRMNDSKAWEVD------IFRGHYNNVSCVLFH 212
+ ++ +N + D+ I ND K W++ RGH ++V+ +
Sbjct: 186 AAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLS 245
Query: 213 PKSEVIVSNAEDKSIRLWDM 232
+ ++SNA D ++R+WD+
Sbjct: 246 SEGSYLLSNAMDNTVRVWDV 265
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+V ++F+ I+S + I++WD R N L H V G+ ++ +S
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 71 DDYKIKVWNYK----QRKCIFTLLGHLDYIRTTFFHHEY-P---WILSASDDQTIRIWNW 122
D ++VW+ + + +C+ G++ + P I + S D+ + +W+
Sbjct: 256 MDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR + L GH + FHP + I++SAS D+ + + +I
Sbjct: 316 TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 138 (53.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 35/158 (22%), Positives = 69/158 (43%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ-PIFV 67
S V L ++ + S+ + + +WD +++ H V C+ ++ P V
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLV 168
Query: 68 -SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
+G DD +K+W+ +++ I T + TF + I+S D I++W+ +
Sbjct: 169 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF-NDTSDQIISGGIDNDIKVWDLRQNK 227
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ GH V ++S ++D T+RVWD+
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 123 (48.4 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD +KLW + A + F+ Y V V F+ S+ I+S D I++WD+ +
Sbjct: 171 GSDDGTVKLWDIRKKAA--IQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Query: 237 CLNTFRREQERFW-----SE--VIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF 283
T R + SE ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNF 285
Score = 101 (40.6 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 29/90 (32%), Positives = 43/90 (47%)
Query: 86 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC--ICVLTGHNHYVMCAQF 143
I L GH + FH + SA D+ I +WN +C L GH+ VM +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 118
Query: 144 HPTDDIVVSASLDQTIRVWDI-SGLRKKNV 172
+ ++ SAS D+T+ VWD +G R K +
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRL 148
Score = 66 (28.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFR--GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
G+ DR + +W D+ + + +++ GH +++ V FHP +I+S + DK + + ++
Sbjct: 304 GSADRFVYVW---DTTSRRI-LYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 194 (73.4 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 66/275 (24%), Positives = 118/275 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
FHP + S+ + +I LW+ Y H G V + ++ + S D +
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 134
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRNCICVLTGH 134
VW+ + + + L GH ++ + + P ++ + SDD T+++W+ + + I T
Sbjct: 135 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQ 192
Query: 135 NHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKA 193
N Y V+ F+ T D ++S +D I+VWD+ RQ KL
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL----------------RQNKL-------- 228
Query: 194 WEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF- 248
RGH ++V+ + + ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 229 --TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 249 -------WS---EVIVSNAEDKSIRLWDMTKRTCL 273
WS I + + D+ + +WD T R L
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL 321
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDD 72
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG D
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 215
Query: 73 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ----SRNCI 128
IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W+ + C+
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 129 CVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
+ G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 276 KIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 326
Score = 175 (66.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 53/200 (26%), Positives = 91/200 (45%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWI 108
HEG V FH S G D I +WN Y TL GH + ++ + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYV-MCAQFHPTDDIVVSASLDQTIRVWDI--- 164
SAS D+T+ +W+ ++ + L GH +V C +V + S D T+++WDI
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 185
Query: 165 SGLRK-KNVAPGMGA-----DDRQIKLWRMNDSKAWEVD------IFRGHYNNVSCVLFH 212
+ ++ +N + D+ I ND K W++ RGH ++V+ +
Sbjct: 186 AAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLS 245
Query: 213 PKSEVIVSNAEDKSIRLWDM 232
+ ++SNA D ++R+WD+
Sbjct: 246 SEGSYLLSNAMDNTVRVWDV 265
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+V ++F+ I+S + I++WD R N L H V G+ ++ +S
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 71 DDYKIKVWNYK----QRKCIFTLLGHLDYIRTTFFHHEY-P---WILSASDDQTIRIWNW 122
D ++VW+ + + +C+ G++ + P I + S D+ + +W+
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
SR + L GH + FHP + I++SAS D+ + + +I
Sbjct: 316 TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 138 (53.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 35/158 (22%), Positives = 69/158 (43%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ-PIFV 67
S V L ++ + S+ + + +WD +++ H V C+ ++ P V
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLV 168
Query: 68 -SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
+G DD +K+W+ +++ I T + TF + I+S D I++W+ +
Sbjct: 169 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF-NDTSDQIISGGIDNDIKVWDLRQNK 227
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ GH V ++S ++D T+RVWD+
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 123 (48.4 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD +KLW + A + F+ Y V V F+ S+ I+S D I++WD+ +
Sbjct: 171 GSDDGTVKLWDIRKKAA--IQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Query: 237 CLNTFRREQERFW-----SE--VIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF 283
T R + SE ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
Score = 101 (40.6 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 29/90 (32%), Positives = 43/90 (47%)
Query: 86 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC--ICVLTGHNHYVMCAQF 143
I L GH + FH + SA D+ I +WN +C L GH+ VM +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 118
Query: 144 HPTDDIVVSASLDQTIRVWDI-SGLRKKNV 172
+ ++ SAS D+T+ VWD +G R K +
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRL 148
Score = 66 (28.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFR--GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
G+ DR + +W D+ + + +++ GH +++ V FHP +I+S + DK + + ++
Sbjct: 304 GSADRFVYVW---DTTSRRI-LYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 195 (73.7 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 54/168 (32%), Positives = 75/168 (44%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL--------EKFDEHEGPVR 55
KF KS + F P ++ SS +G I++WDY L E F H+ PV
Sbjct: 209 KFGKKS-HAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVL 267
Query: 56 GICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 115
I F + SG D KIK+W + CI H + + F + +LS S DQ
Sbjct: 268 CIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQ 327
Query: 116 TIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
T RI +S + GH YV A F +++AS D T++VWD
Sbjct: 328 TARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 129 (50.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 26/114 (22%), Positives = 50/114 (43%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
+ F + S +G I++W R + +FD H V + F +S D
Sbjct: 269 IDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
++ K K + GH Y+ F + I++AS D T+++W+ ++ +C+
Sbjct: 329 ARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCL 382
Score = 50 (22.7 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 202 HYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
H +V + HP ++ + +ED +++LW
Sbjct: 481 HEKDVIGITHHPHRNLLATYSEDCTMKLW 509
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 195 (73.7 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 58/226 (25%), Positives = 109/226 (48%)
Query: 18 HPKRP----WILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGD 71
HP+ P IL++ L++G I++W+ + LL H+ VR + F + I VS
Sbjct: 117 HPQVPDISCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASR 176
Query: 72 DYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D +++W+ K K I L GHL ++ + + SA+ ++++ +W+ +S I
Sbjct: 177 DKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRK 236
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
L GH V+ F P ++V+AS D + +WD P G R + ++ D
Sbjct: 237 LEGHQSSVVSCDFSPDSALLVTASYDTNVIMWD----------PYTGERLRLLHHTQL-D 285
Query: 191 SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
+ D+ H +++ V F P+ + + A+D+ +R+W + +T
Sbjct: 286 PPMDDSDV---HISSLRSVCFSPEGLYLATVADDRLLRIWALELKT 328
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 197 (74.4 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 68/252 (26%), Positives = 108/252 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL-EKFDEHEGPVRGICF---H---NQQP 64
V +++ P I + + I+ WD + + + + H P+ +C+ H + P
Sbjct: 180 VSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGP 239
Query: 65 -IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ SG D +++WN K R +FTL GH I + + WI S+S D+TIRIW+ +
Sbjct: 240 YLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQN-WIYSSSYDKTIRIWDAK 298
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT-IRVWDISGLRKKNVA--------P 174
C+ +L GH V T+ ++ S + D T + S R+K
Sbjct: 299 DGKCLHILKGHAARVNHLSLS-TEHVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQS 357
Query: 175 G----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
G +DD Q+ LW S + GH V+ F P I + + D S+RLW
Sbjct: 358 GERLVSASDDLQLILWDPQKSTK-PITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLW 416
Query: 231 DMTKRTCLNTFR 242
D L T R
Sbjct: 417 DGKTGKFLATLR 428
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 53/206 (25%), Positives = 88/206 (42%)
Query: 84 KCIFTLLGHLD-YIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
+C ++ GH I F +++ S D T R+W+ ++ I + GH ++V C
Sbjct: 125 RCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
Query: 143 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGH 202
+ P I+ + S+D TIR WD K +P A R K + W+ H
Sbjct: 185 WAPDASIIATGSMDNTIRFWD-----PKKGSPIGDALRRHTKPIM---ALCWQPL----H 232
Query: 203 YNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF----WS--EVIVSN 256
S P ++ S ++D ++R+W++ RT L T W I S+
Sbjct: 233 LAPDS----GPY--LLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSS 286
Query: 257 AEDKSIRLWDMTKRTCLNTFRREQER 282
+ DK+IR+WD CL+ + R
Sbjct: 287 SYDKTIRIWDAKDGKCLHILKGHAAR 312
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 32/129 (24%), Positives = 59/129 (45%)
Query: 35 LWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHL 93
LWD + +T + K H+ V F + D +++W+ K K + TL GH+
Sbjct: 372 LWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHV 431
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
+ + + ++S+S D T+++W+ +S+ L GH V + P V S
Sbjct: 432 AAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASG 491
Query: 154 SLDQTIRVW 162
D+ +R+W
Sbjct: 492 GADKAVRIW 500
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 58 CFHNQQPIFVSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
C VS DD ++ +W+ K K I + GH + F + I +AS D +
Sbjct: 353 CLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSS 412
Query: 117 IRIWNWQSRNCICVLTGHNHYV-MCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAP 174
+R+W+ ++ + L GH V CA TD ++VS+S D T++VWD+ + K P
Sbjct: 413 VRLWDGKTGKFLATLRGHVAAVYQCAW--STDSRLLVSSSQDTTLKVWDVRSKKMKFDLP 470
Query: 175 G 175
G
Sbjct: 471 G 471
Score = 136 (52.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/160 (26%), Positives = 70/160 (43%)
Query: 34 QLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLG-H 92
+LWD T + H V + + I +G D I+ W+ K+ I L H
Sbjct: 160 RLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRH 219
Query: 93 LDYIRTTFFH--H----EYPWIL-SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHP 145
I + H P++L S S D T+RIWN + R + L+GH + C ++
Sbjct: 220 TKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGG 279
Query: 146 TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKL 185
+ + S+S D+TIR+WD + ++ G A + L
Sbjct: 280 -QNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSL 318
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 30/120 (25%), Positives = 50/120 (41%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
+TK V SF P I ++ + ++LWD + L H V +
Sbjct: 382 ITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWST 441
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ VS D +KVW+ + +K F L GH D + + + + S D+ +RIW+
Sbjct: 442 DSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 110 (43.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 50 HEGPVRGICFH-NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 108
H+G + F + V+G D+ ++W+ + I T+ GH +++ + + I
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASII 192
Query: 109 LSASDDQTIRIWNWQSRNCIC-VLTGHNHYVM--CAQ-FHPTDD----IVVSASLDQTIR 160
+ S D TIR W+ + + I L H +M C Q H D ++ S S D T+R
Sbjct: 193 ATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVR 252
Query: 161 VWDI 164
+W++
Sbjct: 253 IWNV 256
Score = 104 (41.7 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 178 ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+DD Q+ LW S + GH V+ F P I + + D S+RLWD
Sbjct: 365 SDDLQLILWDPQKSTK-PITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKF 423
Query: 238 LNTFRRE----QERFWS---EVIVSNAEDKSIRLWDMTKR 270
L T R + WS ++VS+++D ++++WD+ +
Sbjct: 424 LATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Score = 94 (38.1 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 25/94 (26%), Positives = 49/94 (52%)
Query: 180 DRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM-TKRTC 237
D ++LW D K + + RGH V + S ++VS+++D ++++WD+ +K+
Sbjct: 410 DSSVRLW---DGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMK 466
Query: 238 LNTFRREQERF---WS---EVIVSNAEDKSIRLW 265
+ E + F WS + + S DK++R+W
Sbjct: 467 FDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 72 (30.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ I++W D K + I +GH V+ + + V+ S A D + D ++ +
Sbjct: 289 DKTIRIWDAKDGKC--LHILKGHAARVNHLSLSTE-HVLRSGAYDHT----DFKPKSFSD 341
Query: 240 TFRREQERFWS------EVIVSNAEDKSIRLWDMTKRT 271
R+ +ER+ + E +VS ++D + LWD K T
Sbjct: 342 ERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKST 379
Score = 53 (23.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 216 EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEV--------IVSNAEDKSIRLWDM 267
E +VS ++D + LWD K T T ++ + I + + D S+RLWD
Sbjct: 359 ERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG 418
Query: 268 TKRTCLNTFR 277
L T R
Sbjct: 419 KTGKFLATLR 428
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 198 (74.8 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
++ + F P ++ + + I++WD T+ F HE + + F SG
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG 378
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D +++W+ + K ++TL D + T + ++ + S D+T+R+W+ + + L
Sbjct: 379 DKTVRLWDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERL 437
Query: 132 T---GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM 188
GH V F P +VS SLD+TI++W+++ R++ + G G K R
Sbjct: 438 ENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGG-----KCHRT 492
Query: 189 NDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
F GH + V V P ++S ++D+ ++ WD
Sbjct: 493 ----------FEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWD 525
Score = 150 (57.9 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 42/168 (25%), Positives = 74/168 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVS 68
V ++ P ++ + + +++WD L+E+ D H+ V + F VS
Sbjct: 402 VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVS 461
Query: 69 GGDDYKIKVWN-------Y----KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 117
G D IK+W Y K KC T GH D++ + + W++S S D+ +
Sbjct: 462 GSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGV 521
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
+ W+ + N +L GH + V+ PT ++ + S D R+W S
Sbjct: 522 QFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYS 569
Score = 147 (56.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 55/248 (22%), Positives = 100/248 (40%)
Query: 54 VRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
+R +CF +G +D +I+VW+ R GH I + F +I S S
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG 378
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRKKNV 172
D+T+R+W+ + L+ + A P V + SLD+T+RVWD + G + +
Sbjct: 379 DKTVRLWDIAEGKLVYTLSIEDGVTTVAM-SPDGLYVAAGSLDKTVRVWDTTTGYLVERL 437
Query: 173 APGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCV--LFHPKSEVIVSNAEDKSIRLW 230
G D + + K ++ G + + L P+ + + K R +
Sbjct: 438 ENPDGHKDSVYSVAFAPNGK----ELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTF 493
Query: 231 DMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
+ K L+ + W ++S ++D+ ++ WD + + + P
Sbjct: 494 EGHKDFVLSVCLTP-DGHW---VMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSP 549
Query: 291 TLNLFAAG 298
T NLFA G
Sbjct: 550 TGNLFATG 557
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVR 55
P + + H G++ + R+N LL++ E E R
Sbjct: 24 PLTMYNAHRGMVPAPNSRLNELLDQLRQEFENQSR 58
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 192 (72.6 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 64/297 (21%), Positives = 127/297 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L E +A + + F + S+ + + LW +L+ +++ H + + + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 62 QQPIFVSGGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
S DD +++W+ + +C+ L GH +++ F+ I+S S D+TIRIW
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
++ C+ ++ H+ + F+ ++VSAS D + ++WD K+
Sbjct: 156 EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA----KEGTC------- 204
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSN-AEDKSIRLWD--MTKRTC 237
L + D K+ V + N ++ S + +SN A K ++++ K C
Sbjct: 205 ----LKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFC 260
Query: 238 LNT-FRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLN 293
+ + F ++ IVS +ED + LWD+ R L + + HP N
Sbjct: 261 ITSAFSVTNGKY----IVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQN 313
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 39/128 (30%), Positives = 65/128 (50%)
Query: 38 YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIR 97
Y+ L+ + H + + F N + S D + +W+ I GH I
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGIS 89
Query: 98 TTFFHHEYPWILSASDDQTIRIWNWQSR-NCICVLTGHNHYVMCAQFHPTDDIVVSASLD 156
+ + + SASDD T+RIW+ +S C+ VL GH ++V C F+P +++VS S D
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 157 QTIRVWDI 164
+TIR+W++
Sbjct: 150 ETIRIWEV 157
Score = 186 (70.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 68/279 (24%), Positives = 122/279 (43%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICF 59
++ ++E S+ + L++ + S+ + +++WD R L+ H V + F
Sbjct: 77 LIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNF 136
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ + VSG D I++W K KC+ + H I + F+ + I+SAS D + +I
Sbjct: 137 NPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA 178
W+ + C+ ++ + V A+F P ++ A+LD T+++ N A G
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL--------SNYATG--- 245
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVL--FH-PKSEVIVSNAEDKSIRLWDMTKR 235
+ +K ++ GH N V C+ F + IVS +ED + LWD+ R
Sbjct: 246 --KFLK-------------VYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQAR 290
Query: 236 TCLNTFRREQERFWS--------EVIVS-NAEDKSIRLW 265
L + S E+ S N DK+IR+W
Sbjct: 291 NILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/176 (27%), Positives = 86/176 (48%)
Query: 178 ADDRQIKLWRMNDSKA-WE-VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
+DD +++W D+++ +E + + RGH N V CV F+P S +IVS + D++IR+W++
Sbjct: 104 SDDCTLRIW---DARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG 160
Query: 236 TCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVA 288
C+ + S +IVS + D S ++WD + TCL T ++ V A
Sbjct: 161 KCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPA-VSFA 219
Query: 289 HPTLN---LFAAGHDAGMVVFKFERER--PAYTVHNNVMYYVKERFLHRLDLTNSK 339
+ N + A D+ + + + + YT H N ++ + F +TN K
Sbjct: 220 KFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAF----SVTNGK 271
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 202 (76.2 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 71/282 (25%), Positives = 121/282 (42%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFHNQQPIFVSG 69
RV ++F + + + +G +++D N L + H + I N IF S
Sbjct: 871 RVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIAC-NSNYIFTSS 929
Query: 70 GDD-YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D+ K+ + KCI TL+GH + + +Y + S S D+TI++W+ + I
Sbjct: 930 PDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANEKY--LFSCSYDKTIKVWDLSTFKEI 987
Query: 129 CVLTG-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG------------ 175
G H Y+ + + S DQ I VWD L G
Sbjct: 988 KSFEGVHTKYIKTLAL--SGRYLFSGGNDQIIYVWDTETLSMLFNMQGHEDWVLSLHCTA 1045
Query: 176 ----MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVS-CVLFHPKSEVIVSNAEDKSIRLW 230
+ D IK+W +++ +D +GH+N+VS CV+ K + S +ED SI++W
Sbjct: 1046 SYLFSTSKDNVIKIWDLSNFSC--IDTLKGHWNSVSSCVV---KDRYLYSGSEDNSIKVW 1100
Query: 231 DMTKRTCLNTFRREQE------RFWSEVIVSNAEDKSIRLWD 266
D+ C+ T + ++ I+S A D SI++W+
Sbjct: 1101 DLDTLECVYTIPKSHSLGVKCLMVFNNQIISAAFDGSIKVWE 1142
Score = 175 (66.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 58/224 (25%), Positives = 103/224 (45%)
Query: 37 DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQR-KCIFTLLGHLDY 95
D + + ++ F E V I F + Q + +G D +V++ KC++T+ GH
Sbjct: 858 DLKCVSTIQSFRER---VNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKS 914
Query: 96 IRTTFFHHEYPWILSASDDQTIRIWNWQSRN--CICVLTGHNHYVMCAQFHPTDDIVVSA 153
I + + Y I ++S D TI++ +S N CI L GH V C + + + S
Sbjct: 915 IESIACNSNY--IFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVAN--EKYLFSC 970
Query: 154 SLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM---------NDS--KAWEVDIFRGH 202
S D+TI+VWD+S K + G + IK + ND W+ +
Sbjct: 971 SYDKTIKVWDLSTF--KEIKSFEGVHTKYIKTLALSGRYLFSGGNDQIIYVWDTETLSML 1028
Query: 203 YN---NVSCVL-FHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+N + VL H + + S ++D I++WD++ +C++T +
Sbjct: 1029 FNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLK 1072
Score = 132 (51.5 bits), Expect = 0.00017, P = 0.00017
Identities = 31/113 (27%), Positives = 60/113 (53%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
LS H ++ S+ + VI++WD + ++ H V C + ++ SG +D
Sbjct: 1039 LSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSS-CVVKDRYLY-SGSEDNS 1096
Query: 75 IKVWNYKQRKCIFTL-LGHLDYIRTTF-FHHEYPWILSASDDQTIRIWNWQSR 125
IKVW+ +C++T+ H ++ F+++ I+SA+ D +I++W WQS+
Sbjct: 1097 IKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQ---IISAAFDGSIKVWEWQSK 1146
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 170 (64.9 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 42/165 (25%), Positives = 72/165 (43%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V SF P ++LS + ++LW +T L + H PV + F F +
Sbjct: 525 SGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFAT 584
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D ++W+ + GHL+ + FH ++ + S D+T R+W+ + + +
Sbjct: 585 ASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSV 644
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNV 172
+ GH V+ P + + S D I VWDI +G R K +
Sbjct: 645 RLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQM 689
Score = 159 (61.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 23 WIL--SSLHNGVIQLW--DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVW 78
W L SSL+N I L D + + H G V F +SG +D +++W
Sbjct: 493 WSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLW 552
Query: 79 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYV 138
+ + + GH + F + +AS DQT R+W+ + + GH + V
Sbjct: 553 SMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDV 612
Query: 139 MCAQFHPTDDIVVSASLDQTIRVWDIS 165
C FHP V + S D+T R+WD+S
Sbjct: 613 DCVSFHPNGCYVFTGSSDKTCRMWDVS 639
Score = 142 (55.0 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 38/180 (21%), Positives = 74/180 (41%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L ++ + V +SF P + ++ H+ +LW L F H V + FH
Sbjct: 560 LVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHP 619
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+G D ++W+ + LGH + + + W+ + S+D I +W+
Sbjct: 620 NGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWD 679
Query: 122 WQSRNCICVLTGHN-HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
+ + + GH + + + ++++S D T+RVWD L+K P D+
Sbjct: 680 IGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWD---LKKATTEPSAEPDE 736
Score = 132 (51.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 40/162 (24%), Positives = 70/162 (43%)
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------GLRKKN-------VAP--- 174
L GH+ V F P + ++S S D+T+R+W + + N +P
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 175 --GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
+ D+ +LW + + + IF GH N+V CV FHP + + + DK+ R+WD+
Sbjct: 581 YFATASHDQTARLWSCDH--IYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 233 TKRTCLNTFRREQERFWSEVIV-------SNAEDKSIRLWDM 267
+ + F S + + +ED I +WD+
Sbjct: 639 STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDI 680
Score = 93 (37.8 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+ D+ ++W ++ + V +F GH V + P + + +ED I +WD+
Sbjct: 627 GSSDKTCRMWDVSTGDS--VRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGK 684
Query: 237 CLNTFRRE-QERFWS-------EVIVSNAEDKSIRLWDMTKRT 271
L R + +S V++S D ++R+WD+ K T
Sbjct: 685 RLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKAT 727
Score = 44 (20.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 345 QLRGGGRIPAHSISYNATEHSILVT 369
Q+RG G+ +S+SY+ E ++L++
Sbjct: 688 QMRGHGKNAIYSLSYSK-EGNVLIS 711
Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 622 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTAD-PNATL-PTVHPE 672
G+R+K ++ G+ ++ L+ + G +R D AT P+ P+
Sbjct: 683 GKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPD 735
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 190 (71.9 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 38/158 (24%), Positives = 76/158 (48%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
+T+ + +++ P ++ S +G+I ++D LL + H P+R + F +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ F + +S+S D+++++W+ +R
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
CI H V +++ +VS DQ I V+D
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 43/154 (27%), Positives = 73/154 (47%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
L+F P ++ + H G + ++ D + I + SG D
Sbjct: 112 LAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
I +++ K + TL GH IR+ F + +++ASDD I+I++ Q N L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
+V+ F P D VS+S D++++VWD+ G R
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDV-GTR 264
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 62/258 (24%), Positives = 111/258 (43%)
Query: 36 W-DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVW---NYKQRKCIFTLLG 91
W D R+ L + H+ V + + PI S D I++W N KQ K I G
Sbjct: 49 WRDERLE-LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDA--G 105
Query: 92 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 151
+D T F + ++ + + + I+ +S L +++ + P +
Sbjct: 106 PVD-AWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 152 SASLDQTIRVWDISGLRKKNVAPGMG--------ADDRQIKLWRMNDS--KAWEVD---- 197
S ++D I ++DI+ + + G + D Q+ + +D K ++V
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 198 --IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS----- 250
GH + V V F P VS++ DKS+++WD+ RTC++TF Q++ W
Sbjct: 225 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNG 284
Query: 251 --EVIVSNAEDKSIRLWD 266
IVS +D+ I ++D
Sbjct: 285 NGSKIVSVGDDQEIHVYD 302
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E + ++ L+F P ++++ +G I+++D + L H V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
FVS D +KVW+ R CI T H D + ++ I+S DDQ I ++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Query: 121 N 121
+
Sbjct: 302 D 302
Score = 118 (46.6 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 30/115 (26%), Positives = 57/115 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GA D I ++ + K + GH + + F P S+++V+ ++D I+++D+
Sbjct: 166 GAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
T F + VS++ DKS+++WD+ RTC++TF Q++ W
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVW 278
Score = 92 (37.4 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 108 ILSASDDQTIRIWNWQSRNCICV--LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI- 164
+++ S D +++W W+ L GH V+ T I S+SLD IR+WD+
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 165 SGLRKKNVAPG 175
+G + K++ G
Sbjct: 95 NGKQMKSIDAG 105
Score = 67 (28.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 67 VSGGDDYKIKVWNYKQRKCI--FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
V+G D +KVW ++ + ++L GH + + H P S+S D IR+W+ ++
Sbjct: 36 VTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN 95
Score = 43 (20.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 148 DIVVSASLDQTIRVW 162
+ VV+ SLD ++VW
Sbjct: 33 ETVVTGSLDDLVKVW 47
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 190 (71.9 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 38/158 (24%), Positives = 76/158 (48%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
+T+ + +++ P ++ S +G+I ++D LL + H P+R + F +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ F + +S+S D+++++W+ +R
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
CI H V +++ +VS DQ I V+D
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 165 (63.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 43/154 (27%), Positives = 72/154 (46%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
L+F P + + H G + ++ D + I + SG D
Sbjct: 112 LAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
I +++ K + TL GH IR+ F + +++ASDD I+I++ Q N L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
+V+ F P D VS+S D++++VWD+ G R
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDV-GTR 264
Score = 145 (56.1 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 62/258 (24%), Positives = 110/258 (42%)
Query: 36 W-DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVW---NYKQRKCIFTLLG 91
W D R+ L + H+ V + + PI S D I++W N KQ K I G
Sbjct: 49 WRDERLE-LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDA--G 105
Query: 92 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 151
+D T F + + + + + I+ +S L +++ + P +
Sbjct: 106 PVD-AWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 152 SASLDQTIRVWDISGLRKKNVAPGMG--------ADDRQIKLWRMNDS--KAWEVD---- 197
S ++D I ++DI+ + + G + D Q+ + +D K ++V
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 198 --IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS----- 250
GH + V V F P VS++ DKS+++WD+ RTC++TF Q++ W
Sbjct: 225 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNG 284
Query: 251 --EVIVSNAEDKSIRLWD 266
IVS +D+ I ++D
Sbjct: 285 NGSKIVSVGDDQEIHVYD 302
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E + ++ L+F P ++++ +G I+++D + L H V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
FVS D +KVW+ R CI T H D + ++ I+S DDQ I ++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Query: 121 N 121
+
Sbjct: 302 D 302
Score = 118 (46.6 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 30/115 (26%), Positives = 57/115 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GA D I ++ + K + GH + + F P S+++V+ ++D I+++D+
Sbjct: 166 GAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
T F + VS++ DKS+++WD+ RTC++TF Q++ W
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVW 278
Score = 92 (37.4 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 108 ILSASDDQTIRIWNWQSRNCICV--LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI- 164
+++ S D +++W W+ L GH V+ T I S+SLD IR+WD+
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 165 SGLRKKNVAPG 175
+G + K++ G
Sbjct: 95 NGKQMKSIDAG 105
Score = 67 (28.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 67 VSGGDDYKIKVWNYKQRKCI--FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
V+G D +KVW ++ + ++L GH + + H P S+S D IR+W+ ++
Sbjct: 36 VTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN 95
Score = 43 (20.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 148 DIVVSASLDQTIRVW 162
+ VV+ SLD ++VW
Sbjct: 33 ETVVTGSLDDLVKVW 47
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 188 (71.2 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 36/158 (22%), Positives = 76/158 (48%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
+T+ + +++ P ++ S +G+I ++D LL + H P+R + F +
Sbjct: 127 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 186
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ F + +S+S D+++++W+ +R
Sbjct: 187 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 246
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
C+ H V +++ +VS DQ I ++D
Sbjct: 247 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 43/154 (27%), Positives = 73/154 (47%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
L+F P ++ + H G + ++ D + I + SG D
Sbjct: 94 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 153
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
I +++ K + TL GH IR+ F + +++ASDD I+I++ Q N L+GH
Sbjct: 154 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 213
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
+V+ F P D VS+S D++++VWD+ G R
Sbjct: 214 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDV-GTR 246
Score = 136 (52.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E + ++ L+F P ++++ +G I+++D + L H V + F
Sbjct: 164 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 223
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
FVS D +KVW+ R C+ T H D + ++ I+S DDQ I I+
Sbjct: 224 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
Query: 121 N 121
+
Sbjct: 284 D 284
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/216 (22%), Positives = 97/216 (44%)
Query: 75 IKVWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
+++W+ + K I ++ G +D T F + ++ + + + I+ +S L
Sbjct: 70 VRLWDLENGKQIKSIDAGPVD-AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 128
Query: 134 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--------ADDRQIKL 185
+++ + P + S ++D I ++DI+ + + G + D Q+ +
Sbjct: 129 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 188
Query: 186 WRMNDS--KAWEVD------IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTC 237
+D K ++V GH + V V F P VS++ DKS+++WD+ RTC
Sbjct: 189 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 248
Query: 238 LNTFRREQERFWS-------EVIVSNAEDKSIRLWD 266
++TF Q++ W IVS +D+ I ++D
Sbjct: 249 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 56/237 (23%), Positives = 103/237 (43%)
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCI--FTLLGH-LDYIRTTFFHHEYPWILSASDDQTI 117
N + + V+G D +KVW ++ K ++L GH L + + E + + D +
Sbjct: 31 NSETV-VTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVRLWDLENGKQIKSIDAGPV 89
Query: 118 RIWNWQ-SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR-VWDIS-GLRKKNVAP 174
W S + + TG H V + SLD + + I+ K +A
Sbjct: 90 DAWTLAFSPDSQYLATG-TH-VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 147
Query: 175 GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G A D I ++ + K + GH + + F P S+++V+ ++D I+++D+
Sbjct: 148 G--AIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 203
Query: 235 RTCLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
T F + VS++ DKS+++WD+ RTC++TF Q++ W
Sbjct: 204 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 260
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 194 (73.4 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 66/275 (24%), Positives = 118/275 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWD-YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
FHP + S+ + +I LW+ Y H G V + ++ + S D +
Sbjct: 74 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 133
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRNCICVLTGH 134
VW+ + + + L GH ++ + + P ++ + SDD T+++W+ + + I T
Sbjct: 134 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQ 191
Query: 135 NHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKA 193
N Y V+ F+ T D ++S +D I+VWD+ RQ KL
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL----------------RQNKL-------- 227
Query: 194 WEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF- 248
RGH ++V+ + + ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 228 --TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 249 -------WS---EVIVSNAEDKSIRLWDMTKRTCL 273
WS I + + D+ + +WD T R L
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL 320
Score = 189 (71.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDD 72
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG D
Sbjct: 156 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 214
Query: 73 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ----SRNCI 128
IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W+ + C+
Sbjct: 215 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 129 CVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
+ G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 275 KIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 325
Score = 175 (66.7 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 53/200 (26%), Positives = 91/200 (45%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWI 108
HEG V FH S G D I +WN Y TL GH + ++ + +
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 124
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYV-MCAQFHPTDDIVVSASLDQTIRVWDI--- 164
SAS D+T+ +W+ ++ + L GH +V C +V + S D T+++WDI
Sbjct: 125 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 184
Query: 165 SGLRK-KNVAPGMGA-----DDRQIKLWRMNDSKAWEVD------IFRGHYNNVSCVLFH 212
+ ++ +N + D+ I ND K W++ RGH ++V+ +
Sbjct: 185 AAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLS 244
Query: 213 PKSEVIVSNAEDKSIRLWDM 232
+ ++SNA D ++R+WD+
Sbjct: 245 SEGSYLLSNAMDNTVRVWDV 264
Score = 138 (53.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 35/158 (22%), Positives = 69/158 (43%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ-PIFV 67
S V L ++ + S+ + + +WD +++ H V C+ ++ P V
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLV 167
Query: 68 -SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
+G DD +K+W+ +++ I T + TF + I+S D I++W+ +
Sbjct: 168 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF-NDTSDQIISGGIDNDIKVWDLRQNK 226
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ GH V ++S ++D T+RVWD+
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 123 (48.4 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G+DD +KLW + A + F+ Y V V F+ S+ I+S D I++WD+ +
Sbjct: 170 GSDDGTVKLWDIRKKAA--IQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 226
Query: 237 CLNTFRREQERFW-----SE--VIVSNAEDKSIRLWDMT----KRTCLNTFRREQERF 283
T R + SE ++SNA D ++R+WD+ K C+ F+ F
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 284
Score = 101 (40.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 29/90 (32%), Positives = 43/90 (47%)
Query: 86 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC--ICVLTGHNHYVMCAQF 143
I L GH + FH + SA D+ I +WN +C L GH+ VM +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 117
Query: 144 HPTDDIVVSASLDQTIRVWDI-SGLRKKNV 172
+ ++ SAS D+T+ VWD +G R K +
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRL 147
Score = 49 (22.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFR--GHYNNVSCVLFHPKSEVI 218
G+ DR + +W D+ + + +++ GH +++ V FHP +I
Sbjct: 303 GSADRFVYVW---DTTSRRI-LYKLPGHAGSINEVAFHPDEPII 342
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 184 (69.8 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 39/166 (23%), Positives = 78/166 (46%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
+ E S RV +++HP ++ ++ ++ +LWD + + + H V + FH
Sbjct: 301 IADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHP 360
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
+ +GG D +VW+ + +C+ L GH+ I + F + + S D ++W+
Sbjct: 361 DGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWD 420
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG 166
+ R CI + H + V +F P D +++ + D T ++W G
Sbjct: 421 LRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPG 466
Score = 171 (65.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E S V L FHP + + ++WD R + + H + I F
Sbjct: 347 EGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFH 406
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQS 124
+G D KVW+ +QR+CI+T+ H + + + F ++ ++L+ + D T +IW
Sbjct: 407 VATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPG 466
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ + L GH VM P ++ + S D+T ++W
Sbjct: 467 WSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 134 (52.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 37/156 (23%), Positives = 66/156 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD----- 71
F P ++++ +G+ +LW TL+ H V I FH Q + + D
Sbjct: 224 FSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMAS 283
Query: 72 ---DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D +K+W+ + I + GH + +H ++ + D + R+W+ + + I
Sbjct: 284 CAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEI 343
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
GH+ V FHP + + LD RVWD+
Sbjct: 344 LHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDL 379
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 45/213 (21%), Positives = 83/213 (38%)
Query: 9 SARVKGLSFHPKRPWIL--------SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ V +SFHP+ L S +G ++LW + + + H V + +H
Sbjct: 258 NTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWH 317
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ D+ ++W+ + ++ I GH + FH + + D R+W
Sbjct: 318 PSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVW 377
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
+ ++ C+ L GH + F P V + S D +VWD+ R P
Sbjct: 378 DLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLV 437
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP 213
+K ++ ND + G Y+N + + HP
Sbjct: 438 SSVK-FQPNDGHY----LLTGAYDNTAKIWTHP 465
Score = 96 (38.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 28/120 (23%), Positives = 48/120 (40%)
Query: 53 PVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS 112
P+ F + V+ K+W I TL GH + FH + L S
Sbjct: 218 PISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEES 277
Query: 113 D--------DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
D D ++++W+ S I + GH+ V +HP+ + + D + R+WD+
Sbjct: 278 DVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDL 337
Score = 90 (36.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 186 WRMNDSKAWEVDIFR-GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRRE 244
WR+ D + E + + GH V + FHP + + D R+WD+ C+
Sbjct: 332 WRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGH 391
Query: 245 QERFWSEV-------IVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+ +S + + + D + ++WD+ +R C+ T Q
Sbjct: 392 IKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQ 434
Score = 60 (26.2 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 177 GADDRQIKLWRMNDSKAWE-VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
GA D K+W W + GH V V P ++I + + D++ +LW
Sbjct: 453 GAYDNTAKIWT---HPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 189 (71.6 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 37/158 (23%), Positives = 76/158 (48%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
+T+ + +++ P ++ S +G+I ++D LL + H P+R + F +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ F + +S+S D+++++W+ +R
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
C+ H V +++ +VS DQ I V+D
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 43/154 (27%), Positives = 73/154 (47%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
L+F P ++ + H G + ++ D + I + SG D
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
I +++ K + TL GH IR+ F + +++ASDD I+I++ Q N L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
+V+ F P D VS+S D++++VWD+ G R
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDV-GTR 264
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 59/256 (23%), Positives = 112/256 (43%)
Query: 36 W-DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL-LGHL 93
W D R++ L + H+ V + + PI S D I++W+ K I ++ G +
Sbjct: 49 WCDERLD-LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPV 107
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
D T F + ++ + + + I+ +S L +++ + P + S
Sbjct: 108 D-AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 154 SLDQTIRVWDISGLRKKNVAPGMG--------ADDRQIKLWRMNDS--KAWEVD------ 197
++D I ++DI+ + + G + D Q+ + +D K ++V
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 198 IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS------- 250
GH + V V F P VS++ DKS+++WD+ RTC++TF Q++ W
Sbjct: 227 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG 286
Query: 251 EVIVSNAEDKSIRLWD 266
IVS +D+ I ++D
Sbjct: 287 SKIVSVGDDQEIHVYD 302
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E + ++ L+F P ++++ +G I+++D + L H V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
FVS D +KVW+ R C+ T H D + ++ I+S DDQ I ++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Query: 121 N 121
+
Sbjct: 302 D 302
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 206 (77.6 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 35/156 (22%), Positives = 72/156 (46%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S+ + ++F + + +G I+LWD ++ H + FH F S
Sbjct: 59 SSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFAS 118
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
G D +K+W+ +++ CI T GH + F + W++S +D +++W+ + +
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
H + FHP + ++ + S D+T++ WD+
Sbjct: 179 TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 204 (76.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 49/209 (23%), Positives = 91/209 (43%)
Query: 44 LEKFDEHEGPVRGICFHNQQP-IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
L++F H V + + + V+GG+D+K+ +W + I +L GH I + F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
+ + + TI++W+ + + LTGH + FHP + S SLD +++W
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 163 DISGLRKKNVAPGMGADDRQIKLWRM-------------NDSKAWEVDI------FRGHY 203
DI RKK R + + R N K W++ F+ H
Sbjct: 129 DI---RKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 204 NNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
+ + FHP ++ + + D++++ WD+
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 170 (64.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 44/166 (26%), Positives = 74/166 (44%)
Query: 2 LTKFETKSARVKGLSFHPKRPWIL-SSLHNGVIQLWDY-RMNTLLEKFDEHEGPVRGICF 59
L +F SA V L K +L + + + LW + N +L + H + + F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYG-HSSGIDSVTF 67
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ + +G IK+W+ ++ K + TL GH + FH + S S D ++I
Sbjct: 68 DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
Query: 120 WNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
W+ + + CI GH V +F P VVS D ++VWD++
Sbjct: 128 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
Score = 168 (64.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
GA IKLW + ++K V GH +N V FHP E S + D ++++WD+ K+
Sbjct: 77 GAASGTIKLWDLEEAKI--VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
Query: 237 CLNTFRREQE-----RFWSEV--IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAH 289
C++T++ RF + +VS ED +++WD+T L F+ + + L H
Sbjct: 135 CIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFH 194
Query: 290 PTLNLFAAG 298
P L A G
Sbjct: 195 PHEFLLATG 203
Score = 146 (56.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 48/196 (24%), Positives = 85/196 (43%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
+ FHP + S + +++WD R + + H V + F VSGG+D
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNI 166
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRNCICVLTG 133
+KVW+ K + H I++ FH HE+ + + S D+T++ W+ ++ I
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEF-LLATGSADRTVKFWDLETFELIGSGGP 225
Query: 134 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKA 193
V C F+P D V L ++++++ +R + G D + R++D
Sbjct: 226 ETAGVRCLSFNP-DGKTVLCGLQESLKIFSWEPIRCHD-----GVD---VGWSRLSDMNV 276
Query: 194 WEVDIFRGHYNNVSCV 209
E + YN SCV
Sbjct: 277 HEGKLLGCSYNQ-SCV 291
Score = 43 (20.2 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 716 CREADHVILFDVQQKRALAQVKVAKCRHVVTKKMSSVG 753
C D V+L D K L ++ V++ + K+ S+G
Sbjct: 321 CSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLG 358
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 184 (69.8 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 39/164 (23%), Positives = 79/164 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
++ + F P ++ + + +++WD + F HE + + + + VSG
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 72 DYKIKVWNYKQRKCIFTL----LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
D K K+W+ ++ KC FTL +G + + + + + + S D +R+W+ Q+
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 171
+ GH V F P + S SLD+++++WD+SG R ++
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRS 493
Score = 163 (62.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 36/143 (25%), Positives = 70/143 (48%)
Query: 27 SLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYK----Q 82
SL N +++LWD + LE+++ H V + F SG D +K+W+ +
Sbjct: 434 SLDN-IVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSR 492
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
+C T GH D++ + F + W++S S D++++ W+ ++ +L GH + V+
Sbjct: 493 SRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVA 552
Query: 143 FHPTDD---IVVSASLDQTIRVW 162
P ++ + + S D R+W
Sbjct: 553 LSPKNNSHGVFATGSGDFRSRLW 575
Score = 133 (51.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 35/160 (21%), Positives = 71/160 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHNQQP---IFV 67
+ L + +I+S + ++WD E GP G+ P +
Sbjct: 372 IYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVA 431
Query: 68 SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW---QS 124
+G D +++W+ + + GHLD + + F + + S S D+++++W+ +S
Sbjct: 432 AGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRS 491
Query: 125 RN-CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
R+ C GH +V+ F P ++S S D++++ WD
Sbjct: 492 RSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWD 531
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 47/205 (22%), Positives = 89/205 (43%)
Query: 95 YIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS 154
YIR+ F + ++ + ++D+T+++W+ ++ GH + + +VS S
Sbjct: 329 YIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGS 388
Query: 155 LDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
D+ ++WDI K A +G N+ EV G N V+ V P
Sbjct: 389 GDKKAKIWDIE---KGKCAFTLG-----------NE----EV----GPKNGVTSVAMSPD 426
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSNAEDKSIRLWDM 267
++ + + D +RLWD L + + +S + + S + DKS++LWD+
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Query: 268 T----KRTCLNTFRREQERFWVLVA 288
+ + C TF ++ F + VA
Sbjct: 487 SGSRSRSRCRATFNGHKD-FVLSVA 510
Score = 61 (26.5 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE---VIVSNAEDKSIRLW 230
G+ DR ++ W + + +GH N+V V PK+ V + + D RLW
Sbjct: 521 GSKDRSVQFWDPRNGTTHMM--LQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 196 (74.1 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 60/221 (27%), Positives = 102/221 (46%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V+ ++F P ++++ + I+LWD + F HE + + F + VSG
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D ++W+ + +CI L ++ +I S DQ IR+W+ S + L
Sbjct: 423 DRTARLWDVETGQCILKLEIENGVTAIAISPNDQ-FIAVGSLDQIIRVWS-VSGTLVERL 480
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS 191
GH V F P I++S SLD+TI+VW++ R + G+ A IK +
Sbjct: 481 EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATR----SVGLSA----IKPEGI--C 530
Query: 192 KAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
KA + GH + V V P S +S ++D+S++ WD+
Sbjct: 531 KA----TYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDL 567
Score = 165 (63.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 58/217 (26%), Positives = 92/217 (42%)
Query: 54 VRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 113
VR I F V+G +D +IK+W+ +K + GH I + F H +I+S S
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 114 DQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 173
D+T R+W+ ++ CI L N A P D + SLDQ IRVW +SG + +
Sbjct: 423 DRTARLWDVETGQCILKLEIENGVTAIA-ISPNDQFIAVGSLDQIIRVWSVSGTLVERLE 481
Query: 174 PGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVL-FHPKSEVIVSNAEDKSIRLWDM 232
G + + DS + G + V V +S + + I
Sbjct: 482 ---GHKESVYSIAFSPDSSI----LLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATY 534
Query: 233 TKRT--CLNTFRREQERFWSEVIVSNAEDKSIRLWDM 267
T T L+ R W +S ++D+S++ WD+
Sbjct: 535 TGHTDFVLSVAVSPDSR-WG---LSGSKDRSMQFWDL 567
Score = 162 (62.1 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 45/175 (25%), Positives = 75/175 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
+ K E ++ V ++ P +I + +I++W TL+E+ + H+ V I F
Sbjct: 437 ILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSP 494
Query: 62 QQPIFVSGGDDYKIKVWNYKQRK------------CIFTLLGHLDYIRTTFFHHEYPWIL 109
I +SG D IKVW + + C T GH D++ + + W L
Sbjct: 495 DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGL 554
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
S S D++++ W+ Q+ GH + V+ F P S S D R+W I
Sbjct: 555 SGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 150 (57.9 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 50/221 (22%), Positives = 89/221 (40%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ L F +I+S + +LWD + K + G V I G
Sbjct: 405 IYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSL 463
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
D I+VW+ + L GH + + + F + +LS S D+TI++W Q+ + +
Sbjct: 464 DQIIRVWSVSGT-LVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLS 522
Query: 132 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDS 191
+ A + D V+S ++ R W +SG + DR ++ W +
Sbjct: 523 AIKPEGICKATYTGHTDFVLSVAVSPDSR-WGLSGSK-----------DRSMQFWDLQTG 570
Query: 192 KAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
+++ +GH N+V V F P S + D R+W +
Sbjct: 571 QSYLT--CQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 123 (48.4 bits), Expect = 0.00072, P = 0.00072
Identities = 38/145 (26%), Positives = 69/145 (47%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
G +DRQIKLW ++ K V F GH ++ + F IVS + D++ RLWD+
Sbjct: 378 GTEDRQIKLWDLSTQKVRYV--FSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQ 435
Query: 237 CLNTFRREQERFWSEVIVS-NAE-------DKSIRLWDMTKRTCLNTFRREQERFWVLVA 288
C+ + E E + + +S N + D+ IR+W ++ T + +E + +
Sbjct: 436 CI--LKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSG-TLVERLEGHKESVYSIAF 492
Query: 289 HPTLNLFAAGH-DAGMVVFKFERER 312
P ++ +G D + V++ + R
Sbjct: 493 SPDSSILLSGSLDKTIKVWELQATR 517
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 188 (71.2 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 36/158 (22%), Positives = 76/158 (48%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
+T+ + +++ P ++ S +G+I ++D LL + H P+R + F +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ F + +S+S D+++++W+ +R
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
C+ H V +++ +VS DQ I ++D
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 43/154 (27%), Positives = 73/154 (47%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
L+F P ++ + H G + ++ D + I + SG D
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
I +++ K + TL GH IR+ F + +++ASDD I+I++ Q N L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
+V+ F P D VS+S D++++VWD+ G R
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDV-GTR 264
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 59/256 (23%), Positives = 113/256 (44%)
Query: 36 W-DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL-LGHL 93
W D R++ L + H+ V + + PI S D I++W+ + K I ++ G +
Sbjct: 49 WRDERLD-LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV 107
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
D T F + ++ + + + I+ +S L +++ + P + S
Sbjct: 108 D-AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 154 SLDQTIRVWDISGLRKKNVAPGMG--------ADDRQIKLWRMNDS--KAWEVD------ 197
++D I ++DI+ + + G + D Q+ + +D K ++V
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 198 IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS------- 250
GH + V V F P VS++ DKS+++WD+ RTC++TF Q++ W
Sbjct: 227 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG 286
Query: 251 EVIVSNAEDKSIRLWD 266
IVS +D+ I ++D
Sbjct: 287 SKIVSVGDDQEIHIYD 302
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E + ++ L+F P ++++ +G I+++D + L H V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
FVS D +KVW+ R C+ T H D + ++ I+S DDQ I I+
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Query: 121 N 121
+
Sbjct: 302 D 302
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 188 (71.2 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 36/158 (22%), Positives = 76/158 (48%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
+T+ + +++ P ++ S +G+I ++D LL + H P+R + F +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ F + +S+S D+++++W+ +R
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 126 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
C+ H V +++ +VS DQ I ++D
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 43/154 (27%), Positives = 73/154 (47%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
L+F P ++ + H G + ++ D + I + SG D
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGH 134
I +++ K + TL GH IR+ F + +++ASDD I+I++ Q N L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
+V+ F P D VS+S D++++VWD+ G R
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDV-GTR 264
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 58/256 (22%), Positives = 113/256 (44%)
Query: 36 W-DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL-LGHL 93
W D +++ L + H+ V + + PI S D I++W+ + K I ++ G +
Sbjct: 49 WRDEKLD-LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV 107
Query: 94 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 153
D T F + ++ + + + I+ +S L +++ + P + S
Sbjct: 108 D-AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 154 SLDQTIRVWDISGLRKKNVAPGMG--------ADDRQIKLWRMNDS--KAWEVD------ 197
++D I ++DI+ + + G + D Q+ + +D K ++V
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 198 IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS------- 250
GH + V V F P VS++ DKS+++WD+ RTC++TF Q++ W
Sbjct: 227 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG 286
Query: 251 EVIVSNAEDKSIRLWD 266
IVS +D+ I ++D
Sbjct: 287 SKIVSVGDDQEIHIYD 302
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L E + ++ L+F P ++++ +G I+++D + L H V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
FVS D +KVW+ R C+ T H D + ++ I+S DDQ I I+
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Query: 121 N 121
+
Sbjct: 302 D 302
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 147 (56.8 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 39/167 (23%), Positives = 72/167 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ L+ P ++ + +++++D ++++ F + PV + +F GG
Sbjct: 63 ITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNF-KLPSPVYISSVDSTSSLFAFGGS 121
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY---PWILSASDDQ-TIRIWNWQSRNC 127
D I VW+ + +L GH I + FH E W L++ D T++IW+ R C
Sbjct: 122 DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRC 181
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 174
I L HN V F D+ +S D + +++ + N P
Sbjct: 182 IHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFP 228
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/152 (21%), Positives = 65/152 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ + P + ++ ++ + ++W + H+ + I F+ + V+G
Sbjct: 481 INSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSG 540
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D IKVW+ C TL GH + + R FF+ E+P +LS D I++W+++ I
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
L H+ + + +A D + W
Sbjct: 601 LDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
Identities = 46/179 (25%), Positives = 74/179 (41%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDE------HEGPVRGICFHNQQ--PIF-VSGGDDY 73
WI ++ + +LW R N L+ F+ H G + I Q P F V+G D
Sbjct: 395 WIATASKDNEARLW--RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDL 452
Query: 74 KIKVW------NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
IK W N + +T H I + + +AS D+ ++W S
Sbjct: 453 TIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGET 512
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLW 186
I VL GH + F+ D ++V+ S D+TI+VW + K G +++K +
Sbjct: 513 IGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFF 571
Score = 103 (41.3 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 23/115 (20%), Positives = 56/115 (48%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ K+W+ + + + + +GH + + F+ ++IV+ + DK+I++W + +C
Sbjct: 499 DKLGKVWQTDSGET--IGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKK 556
Query: 240 TFRR-----EQERFWSEV---IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
T ++ +F++ ++S D I+LWD + + + +R W +
Sbjct: 557 TLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAM 611
Score = 98 (39.6 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 161 VWDISGLR-KKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCV-LFHPKSEVI 218
+WDI+ + K + G G D+ IK+W + D + GH N+V V F+ + +
Sbjct: 523 LWDINFYKFDKLIVTGSG--DKTIKVWSLLDFSCKKT--LEGHTNSVQRVKFFNREHPQL 578
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAE 258
+S D I+LWD + + + +R W+ + ++ E
Sbjct: 579 LSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGE 618
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 147 (56.8 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 39/167 (23%), Positives = 72/167 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ L+ P ++ + +++++D ++++ F + PV + +F GG
Sbjct: 63 ITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNF-KLPSPVYISSVDSTSSLFAFGGS 121
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY---PWILSASDDQ-TIRIWNWQSRNC 127
D I VW+ + +L GH I + FH E W L++ D T++IW+ R C
Sbjct: 122 DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRC 181
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 174
I L HN V F D+ +S D + +++ + N P
Sbjct: 182 IHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFP 228
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/152 (21%), Positives = 65/152 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ + P + ++ ++ + ++W + H+ + I F+ + V+G
Sbjct: 481 INSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSG 540
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
D IKVW+ C TL GH + + R FF+ E+P +LS D I++W+++ I
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
L H+ + + +A D + W
Sbjct: 601 LDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
Identities = 46/179 (25%), Positives = 74/179 (41%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDE------HEGPVRGICFHNQQ--PIF-VSGGDDY 73
WI ++ + +LW R N L+ F+ H G + I Q P F V+G D
Sbjct: 395 WIATASKDNEARLW--RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDL 452
Query: 74 KIKVW------NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
IK W N + +T H I + + +AS D+ ++W S
Sbjct: 453 TIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGET 512
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLW 186
I VL GH + F+ D ++V+ S D+TI+VW + K G +++K +
Sbjct: 513 IGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFF 571
Score = 103 (41.3 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 23/115 (20%), Positives = 56/115 (48%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D+ K+W+ + + + + +GH + + F+ ++IV+ + DK+I++W + +C
Sbjct: 499 DKLGKVWQTDSGET--IGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKK 556
Query: 240 TFRR-----EQERFWSEV---IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
T ++ +F++ ++S D I+LWD + + + +R W +
Sbjct: 557 TLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAM 611
Score = 98 (39.6 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 161 VWDISGLR-KKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCV-LFHPKSEVI 218
+WDI+ + K + G G D+ IK+W + D + GH N+V V F+ + +
Sbjct: 523 LWDINFYKFDKLIVTGSG--DKTIKVWSLLDFSCKKT--LEGHTNSVQRVKFFNREHPQL 578
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAE 258
+S D I+LWD + + + +R W+ + ++ E
Sbjct: 579 LSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGE 618
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 196 (74.1 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 62/247 (25%), Positives = 99/247 (40%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMN-------TLLEKFD------EHEGPVRGICFHNQQ 63
F P I I+LW + + T +E D H GPV G F
Sbjct: 332 FSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDN 391
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+S +D ++W+ + + GH + F + +AS DQT ++W+
Sbjct: 392 KYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCD 451
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS---GLRKKN--------- 171
+ V GH V C FHP V++ S D+T R+WD+ +R N
Sbjct: 452 HIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAV 511
Query: 172 -VAPG---MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSI 227
+AP M + D + + + + RGH N+ + F +S V+VS D ++
Sbjct: 512 AIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTV 571
Query: 228 RLWDMTK 234
R WD+ K
Sbjct: 572 RAWDVFK 578
Score = 194 (73.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 54/207 (26%), Positives = 87/207 (42%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G +F P ++LS + +LW T L + H GPV + F F +
Sbjct: 379 SGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFAT 438
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D ++W+ + GHL + FH ++L+ S D+T R+W+ + +
Sbjct: 439 ASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSV 498
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMG-----ADDRQ 182
V GH V P + SA + I +WDI +G R K + G + R+
Sbjct: 499 RVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRE 558
Query: 183 IKLWRMNDS----KAWEVDIFRGHYNN 205
+ S +AW D+F+ +YNN
Sbjct: 559 STVLVSGGSDCTVRAW--DVFKTNYNN 583
Score = 134 (52.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 55/245 (22%), Positives = 107/245 (43%)
Query: 131 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI---SGL--RKKNVAP----GMG---- 177
L H+ V F P + ++S S D + R+W + + L K + P G
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH 434
Query: 178 -----ADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
+ D+ +LW + + + +F GH ++V CV FHP S +++ + DK+ RLWD+
Sbjct: 435 YFATASHDQTAQLWSCDH--IYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV 492
Query: 233 TKRTCLNTFRREQERFWSEVI------VSNAEDKS-IRLWDMTKRTCLNTFRREQERFWV 285
+ + F + + I +++A+ + I LWD+ + T R + +
Sbjct: 493 HRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYS 552
Query: 286 L-VAHPTLNLFAAGHDAGMV---VFKFERERP-AYTVHNNVM--YYVKERFLHRLDLTNS 338
L + + L + G D + VFK P + ++ +V+ + K + ++ + S
Sbjct: 553 LSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGSVVTPFSAKTSTFNEVNWSTS 612
Query: 339 KDSVV 343
D +V
Sbjct: 613 PDQMV 617
Score = 133 (51.9 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 34/163 (20%), Positives = 64/163 (39%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L ++ + V ++F P + ++ H+ QLW L F H V + FH
Sbjct: 414 LVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHP 473
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
++G D ++W+ + + GH + + + SA + I +W+
Sbjct: 474 NSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWD 533
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
+ I + GH + F ++VS D T+R WD+
Sbjct: 534 IGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 155 (59.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 38/147 (25%), Positives = 65/147 (44%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGH 92
+ ++D +L H V + FH Q + S D I++W+ C+ + H
Sbjct: 246 VVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAH 305
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH--YVMCAQFHPTDDIV 150
+ H ++LS+SDDQ + Q+ + +T + CAQFHP I
Sbjct: 306 ESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIF 365
Query: 151 VSASLDQTIRVWDISGLRKKNVA--PG 175
+ ++D I++WD+ + NVA PG
Sbjct: 366 GTGTMDSQIKIWDLK--ERTNVANFPG 390
Score = 147 (56.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 67 VSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN 126
++GG D + V++ + + TL GH + + FH + SAS D TIRIW+ + +
Sbjct: 238 LTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNAS 297
Query: 127 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV 172
C+ V+ H V H T D ++S+S DQ W S ++ V
Sbjct: 298 CVQVVRAHESAVTGLSLHATGDYLLSSSDDQ---YWAFSDIQTGRV 340
Score = 122 (48.0 bits), Expect = 0.00069, P = 0.00069
Identities = 32/170 (18%), Positives = 71/170 (41%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L + + +V + FHP + + S+ + I++W + ++ HE V G+ H
Sbjct: 256 ILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLH 315
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSASDDQTIR 118
+S DD + + + + + T FH + + + D I+
Sbjct: 316 ATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIK 375
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
IW+ + R + GH+ + F + +A+ D ++++WD+ L+
Sbjct: 376 IWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLK 425
Score = 121 (47.7 bits), Expect = 0.00089, P = 0.00089
Identities = 37/168 (22%), Positives = 68/168 (40%)
Query: 1 MLTKF--ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
+LTK ET + FHP + + I++WD + T + F H GP+ I
Sbjct: 340 VLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIA 399
Query: 59 FHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWI-LSASDDQT 116
F + DD +K+W+ ++ K TL L + +++ F ++ L +D Q
Sbjct: 400 FSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQI 459
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
W I T H+ F + S +D++++ + +
Sbjct: 460 YICKQWTE---ILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 113 (44.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 108 ILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
IL+ D+ + +++ S + L GH V FHP+ D+V SAS D TIR+W +
Sbjct: 237 ILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSV 293
Score = 97 (39.2 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 175 GMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTK 234
G G D QIK+W + + V F GH ++ + F + + A+D S++LWD+ K
Sbjct: 366 GTGTMDSQIKIWDLKERT--NVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423
Score = 94 (38.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 205 NVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSN-------A 257
+++C FHP + + D I++WD+ +RT + F S N A
Sbjct: 352 SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAA 411
Query: 258 EDKSIRLWDMTKRTCLNTFRREQERFWV--LVAHPTLNLFA-AGHDAGMVVFKFERERPA 314
+D S++LWD+ K T + + F V L+ + A G D + + K E
Sbjct: 412 DDSSVKLWDLRKLKNFKTLQLDNN-FEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILH 470
Query: 315 YTVHNNV 321
+T H+ +
Sbjct: 471 FTEHSGL 477
Score = 69 (29.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 21/106 (19%), Positives = 48/106 (45%)
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D I++W + ++ V + R H + V+ + H + ++S+++D+ D+ L
Sbjct: 285 DATIRIWSVPNASC--VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 240 TFRREQE-------RFWSEVIV--SNAEDKSIRLWDMTKRTCLNTF 276
E +F + ++ + D I++WD+ +RT + F
Sbjct: 343 KVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANF 388
WARNING: HSPs involving 819 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 992 951 0.00094 122 3 11 22 0.49 33
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1069
No. of states in DFA: 623 (66 KB)
Total size of DFA: 504 KB (2230 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.00u 0.13s 85.13t Elapsed: 00:00:03
Total cpu time: 85.11u 0.14s 85.25t Elapsed: 00:00:03
Start: Thu Aug 15 14:02:10 2013 End: Thu Aug 15 14:02:13 2013
WARNINGS ISSUED: 2