RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2685
(992 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 149 bits (376), Expect = 2e-40
Identities = 71/305 (23%), Positives = 123/305 (40%), Gaps = 13/305 (4%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ V + FHP ++S+ + I++WDY H V+ I F + + S
Sbjct: 17 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 76
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 77 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV 136
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM 188
TGH +V + + ++ S S DQT+RVW ++ K I
Sbjct: 137 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPE 196
Query: 189 NDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERF 248
+ + ++S + DK+I++WD++ CL T
Sbjct: 197 SSYSSI------SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 250
Query: 249 WS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDA 301
+ I+S A+DK++R+WD + C+ T + L H T G
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 310
Query: 302 GMVVF 306
V
Sbjct: 311 QTVKV 315
Score = 123 bits (309), Expect = 2e-31
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ F V+ + + I S ++ +++W + EH V I +
Sbjct: 135 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA 194
Query: 61 NQQ--------------------PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 100
+ P +SG D IK+W+ C+ TL+GH +++R
Sbjct: 195 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 254
Query: 101 FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 160
FH +ILS +DD+T+R+W+++++ C+ L H H+V FH T VV+ S+DQT++
Sbjct: 255 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 314
Query: 161 VWD 163
VW+
Sbjct: 315 VWE 317
Score = 54.4 bits (129), Expect = 2e-08
Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 13/170 (7%)
Query: 184 KLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRR 243
K W + E GH + V+ V+FHP V+VS +ED +I++WD T +
Sbjct: 1 KEW---IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 57
Query: 244 EQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLN--------LF 295
+ + + + DMT + + + +
Sbjct: 58 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIV 117
Query: 296 AAGHDAGMVVFKFERERPAYTV--HNNVMYYVKERFLHRLDLTNSKDSVV 343
+A D + +++ + T H + V+ L + S D V
Sbjct: 118 SASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 167
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 119 bits (297), Expect = 1e-29
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 2/154 (1%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
V LS P +S + +LWD R + F HE + ICF F +G D
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 72 DYKIKVWNYKQRKCIFTLLGHLDY--IRTTFFHHEYPWILSASDDQTIRIWNWQSRNCIC 129
D ++++ + + + T I + F +L+ DD +W+ +
Sbjct: 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG 306
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
VL GH++ V C V + S D +++W+
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 110 bits (276), Expect = 6e-27
Identities = 35/310 (11%), Positives = 84/310 (27%), Gaps = 76/310 (24%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
A++ + + ++S+ +G + +WD + V +
Sbjct: 55 LAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 69 GGD---------------------------------------------DYKIKVWNYKQR 83
GG D +W+ +
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG 174
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
+ T GH + + + +S + D + ++W+ + C TGH + F
Sbjct: 175 QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 144 HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHY 203
P + + S D T R+ + + +
Sbjct: 235 FPNGNAFATGSDDATCRL------------------------FDLRADQELMTYSHDNII 270
Query: 204 NNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-------EVIVSN 256
++ V F ++++ +D + +WD K R + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 257 AEDKSIRLWD 266
+ D +++W+
Sbjct: 331 SWDSFLKIWN 340
Score = 100 bits (250), Expect = 2e-23
Identities = 45/285 (15%), Positives = 96/285 (33%), Gaps = 32/285 (11%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H + + + + VS D K+ +W+ + + ++ T + ++
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113
Query: 110 SASDDQTIRIWNWQSRNCICVLTGH---NHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
D I+N ++R ++ + + D+ +V++S D T +WDI
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 167 LRKKNVAPGM------------------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSC 208
++ G GA D KLW + + F GH ++++
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM--CRQTFTGHESDINA 231
Query: 209 VLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---------SEVIVSNAED 259
+ F P + ++D + RL+D+ L T+ + ++++ +D
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 260 KSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMV 304
+ +WD K R L A G +
Sbjct: 292 FNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Score = 77.1 bits (188), Expect = 1e-15
Identities = 55/293 (18%), Positives = 104/293 (35%), Gaps = 31/293 (10%)
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCA 141
Q + TL GHL I + + ++SAS D + IW+ + N + + + +VM
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 142 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLW--------------- 186
+ P+ + V LD ++++ A
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 187 ----RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
+ + F GH +V + P + + VS A D S +LWD+ + C TF
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223
Query: 243 REQERFWS-------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWV--LVAHPTLN 293
+ + + ++D + RL+D+ L T+ + + + +
Sbjct: 224 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283
Query: 294 LFAAGHDAGMV-VFKFERERPAYTV--HNNVMYYVKERFLHRLDLTNSKDSVV 343
L AG+D V+ + A + H+N + + T S DS +
Sbjct: 284 LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Score = 58.6 bits (140), Expect = 1e-09
Identities = 40/230 (17%), Positives = 65/230 (28%), Gaps = 26/230 (11%)
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADD 180
L GH + + ++VSAS D + +WD K + P +
Sbjct: 41 GRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWV 100
Query: 181 RQIKLWRMNDSKAWEVDIFRGHYNNVS-------------------CVLFHPKSEVIVSN 221
+ A N+ IV++
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160
Query: 222 AEDKSIRLWDMTKRTCLNTF-------RREQERFWSEVIVSNAEDKSIRLWDMTKRTCLN 274
+ D + LWD+ TF + + VS A D S +LWD+ + C
Sbjct: 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ 220
Query: 275 TFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYY 324
TF + + P N FA G D R +++
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII 270
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 105 bits (261), Expect = 5e-25
Identities = 57/289 (19%), Positives = 104/289 (35%), Gaps = 30/289 (10%)
Query: 78 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHY 137
W + K L GH D++ T I+S SDD T+++W+ + C+ L GH
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 138 VMCAQFHPTDDIVVSASLDQTIRVWD--------------ISGLRKKNVAPGMGADDRQI 183
V +Q I S + + + + G+ D +
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 184 KLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF-- 241
++W + + V + + +VS A D +++WD TCL+T
Sbjct: 120 RVWDIETGQCLHVL----MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG 175
Query: 242 ---RREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
R +F +VS + D SIR+WD+ C++T Q + N+ +G
Sbjct: 176 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSG 233
Query: 299 HDAGMV----VFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVV 343
+ V + + + + + +F +T+S D V
Sbjct: 234 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 282
Score = 102 bits (254), Expect = 5e-24
Identities = 59/321 (18%), Positives = 110/321 (34%), Gaps = 39/321 (12%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
I+S + +++W L H G V + I S K+
Sbjct: 22 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKV 81
Query: 76 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHN 135
+ + H ++S S D T+R+W+ ++ C+ VL GH
Sbjct: 82 WNAETGECIHTL----YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHV 137
Query: 136 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM----------------GAD 179
V C VVS + D ++VWD + G G+
Sbjct: 138 AAVRC--VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSL 195
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
D I++W + + GH + S + ++VS D ++++WD+ CL
Sbjct: 196 DTSIRVWDVETGN--CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQ 251
Query: 240 TFRREQER--------FWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE-----RFWVL 286
T + + F ++++++D +++LWD+ + + W +
Sbjct: 252 TLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 311
Query: 287 VAHPTLNLFAAGHDAGMVVFK 307
A T + A G G K
Sbjct: 312 RASNTKLVCAVGSRNGTEETK 332
Score = 91.0 bits (224), Expect = 3e-20
Identities = 69/293 (23%), Positives = 107/293 (36%), Gaps = 31/293 (10%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDY 95
W + H+ V C VSG DD +KVW+ KC+ TL+GH
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 96 IRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 155
+ ++ + W + C+ T + H H + VVS S
Sbjct: 60 VWSSQMRDNIIIS----GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 115
Query: 156 DQTIRVWDISGLRKKNVAPGMG----------------ADDRQIKLWRMNDSKAWEVDIF 199
D T+RVWDI + +V G A D +K+W + +
Sbjct: 116 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW--DPETETCLHTL 173
Query: 200 RGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWS-----EVIV 254
+GH N V + F +VS + D SIR+WD+ C++T Q ++V
Sbjct: 174 QGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILV 231
Query: 255 SNAEDKSIRLWDMTKRTCLNTFRREQER-FWVLVAHPTLNLFAAGHDAGMVVF 306
S D ++++WD+ CL T + + V N D G V
Sbjct: 232 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 284
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 105 bits (262), Expect = 9e-25
Identities = 70/368 (19%), Positives = 137/368 (37%), Gaps = 73/368 (19%)
Query: 15 LSFHPKR-PWILSSLHNGVIQLWD----YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
L + P L N L++ ++ L K +H V + F N +G
Sbjct: 21 LDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG 80
Query: 70 GDDYKIKVWNYKQRKCIFTL------------------LGHLDYIRTTFFHHEYPWILSA 111
+ +V+ + L YIR+ F + ++ +
Sbjct: 81 CNK-TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 139
Query: 112 SDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI------- 164
++D+ IRIW+ ++R + +L GH + + P+ D +VS S D+T+R+WD+
Sbjct: 140 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL 199
Query: 165 -----SGLRKKNVAPGM------GADDRQIKLWRMNDSKAW-----EVDIFRGHYNNVSC 208
G+ V+PG G+ DR +++W E + GH ++V
Sbjct: 200 TLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 259
Query: 209 VLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW------------------- 249
V+F + +VS + D+S++LW++ + +
Sbjct: 260 VVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN 319
Query: 250 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVA------HPTLNLFAAGHDAGM 303
E I+S ++D+ + WD L + + + P N+FA G
Sbjct: 320 DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 379
Query: 304 V-VFKFER 310
++K+++
Sbjct: 380 ARIWKYKK 387
Score = 62.9 bits (151), Expect = 7e-11
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 6/88 (6%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC-- 58
+ V ++ +ILS + + WD + L H V +
Sbjct: 300 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 359
Query: 59 ----FHNQQPIFVSGGDDYKIKVWNYKQ 82
+ +F +G D K ++W YK+
Sbjct: 360 NGSSLGPEYNVFATGSGDCKARIWKYKK 387
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 95.7 bits (236), Expect = 4e-22
Identities = 57/291 (19%), Positives = 99/291 (34%), Gaps = 43/291 (14%)
Query: 44 LEKFDEHEGPVRGI-CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 102
L++ +G+ C VSG D IK+W+ +C L GH + +
Sbjct: 5 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 162
S+ + N + + D++I VW
Sbjct: 65 ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK----DRSIAVW 120
Query: 163 DISGLRKKNVAPGM-------------------GADDRQIKLWRMNDSKAWEVDIFRGHY 203
D++ + + + DR IK+W + + V GH
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE--FVRTLNGHK 178
Query: 204 NNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFR-----REQERFWSEVIVSNAE 258
++C+ + + ++VS + D +IRLWD+ CL RF ++ IVS A
Sbjct: 179 RGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY 236
Query: 259 DKSIRLWDMTK---------RTCLNTFRREQERFWVLVAHPTLNLFAAGHD 300
D I++WD+ CL T R + L + ++ HD
Sbjct: 237 DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ-IVSSSHD 286
Score = 95.3 bits (235), Expect = 5e-22
Identities = 58/298 (19%), Positives = 93/298 (31%), Gaps = 40/298 (13%)
Query: 1 MLTKFETKSARVKG-LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
L + +S KG I+S L + I++WD H G V + +
Sbjct: 4 SLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 119
+ I S ++ N + D++I +
Sbjct: 64 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCS----KDRSIAV 119
Query: 120 WNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-- 176
W+ S I H D +VSAS D+TI+VW+ S G
Sbjct: 120 WDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 179
Query: 177 --------------GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA 222
G+ D I+LW + + + ++ IVS A
Sbjct: 180 GIACLQYRDRLVVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRFDNKRIVSGA 235
Query: 223 EDKSIRLWDMTK---------RTCLNTFRREQERFWS-----EVIVSNAEDKSIRLWD 266
D I++WD+ CL T R + IVS++ D +I +WD
Sbjct: 236 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 95.7 bits (236), Expect = 1e-21
Identities = 47/331 (14%), Positives = 92/331 (27%), Gaps = 24/331 (7%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSG 69
+ +++ R I +N + +++ N + + EH G V G+ + V+
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69
Query: 70 GDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRN- 126
G D VW K R K +L R + S + I I ++ N
Sbjct: 70 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND 129
Query: 127 ---CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQI 183
C + V+ +HP ++ + S D R++ +
Sbjct: 130 WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEE--------RPAP 181
Query: 184 KLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRR 243
W + V V F + + D ++ L D K+ + T
Sbjct: 182 TPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 241
Query: 244 EQERFWSEV------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFW--VLVAHPTLNLF 295
E + +V+ D L+ +F + F
Sbjct: 242 ETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 301
Query: 296 AAGHDAGMVVFKFERERPAYTVHNNVMYYVK 326
++H N + +
Sbjct: 302 QNLDKKASSEGSAAAGAGLDSLHKNSVSQIS 332
Score = 81.4 bits (199), Expect = 6e-17
Identities = 28/265 (10%), Positives = 75/265 (28%), Gaps = 9/265 (3%)
Query: 53 PVRGICFHNQQPIFVSGGDDYKIKVWNY--KQRKCIFTLLGHLDYIRTTFFHHEYPWILS 110
P+ ++ + +++++ ++ + + L H + + + I++
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 111 ASDDQTIRIWNWQSRN--CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
D+ +W + R V+ N C ++ P + S + I +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ-E 127
Query: 169 KKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
+ + ++ + + K +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 187
Query: 229 LWD----MTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
+ + + + D ++ L D K+ + T E
Sbjct: 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 247
Query: 285 VLVAHPTLNLFAAGHDAGMVVFKFE 309
+ +L AAGHD V+F ++
Sbjct: 248 AVTFITESSLVAAGHDCFPVLFTYD 272
Score = 76.8 bits (187), Expect = 2e-15
Identities = 21/170 (12%), Positives = 49/170 (28%), Gaps = 6/170 (3%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+ + V G+ F + H+ + L D + P+ + F +
Sbjct: 196 ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES 255
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
+ +G D ++ Y + G LD + + + D+
Sbjct: 256 SLVAAGHDC-FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 314
Query: 124 SRNCICVLTGHNHYVMCAQFHPTDDI----VVSASLDQTIRVWDISGLRK 169
+ + + H + V + +D + +WD+ L
Sbjct: 315 AAG-AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 363
Score = 68.3 bits (165), Expect = 1e-12
Identities = 27/208 (12%), Positives = 52/208 (25%), Gaps = 32/208 (15%)
Query: 29 HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFT 88
L+ + G V G+CF D + + + ++ + T
Sbjct: 179 PAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT 238
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDD 148
L + F E + + D ++ + S G P
Sbjct: 239 LASETLPLLAVTFITESSLVAAGHDC-FPVLFTYDSAAGKLSFGGRLD-------VPKQS 290
Query: 149 IVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSC 208
+ + + D K S A + H N+VS
Sbjct: 291 SQRGLTARERFQNLD--------------------KKASSEGSAAAGAGLDSLHKNSVSQ 330
Query: 209 VLFHP----KSEVIVSNAEDKSIRLWDM 232
+ K + D + +WD+
Sbjct: 331 ISVLSGGKAKCSQFCTTGMDGGMSIWDV 358
Score = 62.2 bits (149), Expect = 1e-10
Identities = 28/285 (9%), Positives = 71/285 (24%), Gaps = 15/285 (5%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL--EKFDEHEGPVRGICF 59
+ + + + +V G+ + P I++ + +W + T R + +
Sbjct: 44 VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW 103
Query: 60 HNQQPIFVSGGDDYKIKVWNYKQRK----CIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 115
+ F G I + ++Q C + + +H + + S D
Sbjct: 104 APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 163
Query: 116 TIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
RI++ + + S V + +
Sbjct: 164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG-----WVHGVCFSANGSRVAW 218
Query: 176 MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
+ D + L + A F +S ++ + D L+
Sbjct: 219 VS-HDSTVCLADADKKMAVATLASETLPLLAVT--FITESSLVAA-GHDCFPVLFTYDSA 274
Query: 236 TCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQ 280
+F + + + D + +
Sbjct: 275 AGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 319
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 92.2 bits (227), Expect = 1e-20
Identities = 28/333 (8%), Positives = 82/333 (24%), Gaps = 58/333 (17%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL---LEKFDEHEGPVRGICFHNQQPIFVS 68
+ + P + +L + +G + ++ + + L + ++ P+ F + + +
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
G + F L + + +Y + I RN
Sbjct: 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133
Query: 129 CVLT--------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---- 176
+ ++ + ++ + + N
Sbjct: 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193
Query: 177 ------------------GADDRQIKLWRMNDSKA-------------WEVDIFRGHYNN 205
+ D ++ + +D
Sbjct: 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253
Query: 206 VSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER------FWSEVIVSNAED 259
V+ + F P+ + + + D I W++ R + F + E ++ D
Sbjct: 254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSD 313
Query: 260 KSIRLWDMTKRTCLNTFRREQERFWVL--VAHP 290
+ + T +++ +P
Sbjct: 314 DTFKTN----AAIDQTIELNASSIYIIFDYENP 342
Score = 68.0 bits (164), Expect = 1e-12
Identities = 27/340 (7%), Positives = 81/340 (23%), Gaps = 57/340 (16%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL---LGHLDYIRTT 99
+++ + + I + + + D + V+ + + L L + +
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 100 FFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTI 159
F + Q + + +N + +
Sbjct: 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDG 122
Query: 160 RVWDISGLRKKNVAPGMG--------------------------ADDRQIKLWRMNDSKA 193
+ I + + ++ Q++ +R+ +
Sbjct: 123 LIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCED 182
Query: 194 WEVDIFR--GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSE 251
I Y L + E ++ D + + + +
Sbjct: 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242
Query: 252 V----------------------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVA- 288
+ + + D I W++ R + F + E V +A
Sbjct: 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIAC 302
Query: 289 HPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKER 328
+ A D ++ ++ + +Y + +
Sbjct: 303 SDNILCLATSDDTFKTNAAIDQTIE---LNASSIYIIFDY 339
Score = 61.8 bits (148), Expect = 1e-10
Identities = 19/204 (9%), Positives = 55/204 (26%), Gaps = 14/204 (6%)
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL---TGHNHYVMC 140
+ + DYI +L S D ++ ++ + + L + H ++C
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 141 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFR 200
F D+ + + ++ + + + L +
Sbjct: 62 CNFIDNTDLQIY-----------VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKY 110
Query: 201 GHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDK 260
G ++ + N D I + ++ + S ++ +
Sbjct: 111 GDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNS 170
Query: 261 SIRLWDMTKRTCLNTFRREQERFW 284
++ + + N E +
Sbjct: 171 QVQWFRLPLCEDDNGTIEESGLKY 194
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 84.5 bits (207), Expect = 7e-18
Identities = 35/367 (9%), Positives = 86/367 (23%), Gaps = 96/367 (26%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL------------LGHLDYIR 97
H+ + + N VS D +KVW+ K L H+D ++
Sbjct: 13 HDADIFSVSACNSF--TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ 70
Query: 98 TT-FFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTD--------- 147
E + + S + + + + ++ +
Sbjct: 71 AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS 130
Query: 148 ------DIVVSASLDQTIRVWDISGLRKKNVAPGM------------------------- 176
+V+ + T +W ++ + +
Sbjct: 131 NDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSV 190
Query: 177 ----------GADDRQIKL----WRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNA 222
G ++ +++ + N++ V F P+ ++
Sbjct: 191 DISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 250
Query: 223 EDKSI---RLWDMTKRTCLNTFRREQERF--------------------WSEVIVSNAED 259
+ S L++ + + E + S D
Sbjct: 251 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 310
Query: 260 KSIRLWDMTKRTCLNTFRREQE----RFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAY 315
+R WD+ + + T + +L + A + K
Sbjct: 311 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 370
Query: 316 TVHNNVM 322
N +
Sbjct: 371 ADLNESL 377
Score = 78.7 bits (192), Expect = 6e-16
Identities = 26/318 (8%), Positives = 78/318 (24%), Gaps = 87/318 (27%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRM------NTLLEKFDEHEGPVRGICF--- 59
A + +S + +S +G +++WD ++ H+ + +
Sbjct: 14 DADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQA 71
Query: 60 ----HNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH------------- 102
+ + + + + + ++ + +
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 131
Query: 103 --HEYPWILSASDDQTIRIWNWQS------------------RNCICVLTGHNHYVMCAQ 142
+++ T IW + + + + +
Sbjct: 132 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVD 191
Query: 143 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM------------------------GA 178
++ + + T+++ ++S LR
Sbjct: 192 ISE-RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 250
Query: 179 DDRQIKLWRMNDSKAWE--------------VDIFRGHYNNVSCVLFHPKSEVIVSNAED 224
D + +++ E H + V + F+ E + S D
Sbjct: 251 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 310
Query: 225 KSIRLWDMTKRTCLNTFR 242
+R WD+ + + T
Sbjct: 311 GKLRFWDVKTKERITTLN 328
Score = 71.0 bits (172), Expect = 2e-13
Identities = 28/218 (12%), Positives = 65/218 (29%), Gaps = 36/218 (16%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD------YRMNTLLEKFDEHEGPVR 55
+ T S + + I + +NG +Q+ + + +R
Sbjct: 177 VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 235
Query: 56 GICFHNQQPIFVSGGDD---YKIKVWNYKQRKCIFT-------------LLGHLDYIRTT 99
+ F Q + D I ++ + + I + H ++ +
Sbjct: 236 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL 295
Query: 100 FFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ----FHPTDDIVVSASL 155
F+ + SA D +R W+ +++ I L H + + D + +
Sbjct: 296 SFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV 355
Query: 156 DQTIRVWDISGLRKKNVAPGMG------ADDRQIKLWR 187
V + + + + DR I+ +R
Sbjct: 356 F---DVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 390
Score = 53.3 bits (126), Expect = 9e-08
Identities = 11/117 (9%), Positives = 29/117 (24%), Gaps = 22/117 (18%)
Query: 194 WEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW---- 249
+ + H ++ V VS + D +++WD N + F
Sbjct: 5 ATANAGKAHDADIFSVSACNSF--TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG 62
Query: 250 ----------------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHP 290
++ + + + + +T+ E+
Sbjct: 63 LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKK 119
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 82.3 bits (201), Expect = 2e-17
Identities = 33/297 (11%), Positives = 65/297 (21%), Gaps = 37/297 (12%)
Query: 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIF 66
T L P I V T E + EH
Sbjct: 15 TARGTAVVLGNTPAGDKIQYCNGTSVY-TVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYC 73
Query: 67 VSGGDDYKIKVWNYK--------------------------QRKCIFTLLGHLDYIRTTF 100
SG +++W+ +R F
Sbjct: 74 ASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLF 133
Query: 101 FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 160
L+ + SR + ++ V + P + +
Sbjct: 134 DTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVH 193
Query: 161 VWDISGLRKKNVAPGMGADDRQIKL--WRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVI 218
+ + G + H +V + + P I
Sbjct: 194 SVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI 253
Query: 219 VSNAEDKSIRLWDMTKRTCLNTFRREQE--------RFWSEVIVSNAEDKSIRLWDM 267
S + DK+I++W++ T + + +VS + + I +
Sbjct: 254 ASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 58.0 bits (138), Expect = 2e-09
Identities = 25/276 (9%), Positives = 60/276 (21%), Gaps = 16/276 (5%)
Query: 108 ILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 167
I + ++ S + T H+H A+ P+ S + +R+WD +
Sbjct: 32 IQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT 90
Query: 168 RKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSI 227
+ ++SK + S ++
Sbjct: 91 THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMN 150
Query: 228 RLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLV 287
+ R + + +
Sbjct: 151 SVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD 210
Query: 288 AHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVM--- 344
L G G+ + + + + + S D +
Sbjct: 211 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI----ASASADKTIKIWN 266
Query: 345 --------QLRGGGRIPAHSISYNATEHSILVTTRN 372
+ G RI + T+ +++ + N
Sbjct: 267 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 302
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 81.0 bits (198), Expect = 7e-17
Identities = 34/285 (11%), Positives = 75/285 (26%), Gaps = 28/285 (9%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-----TLLEKFDEHEGPVRGICFHNQQ 63
V ++ + + G +++WD + +R
Sbjct: 51 GEVVCAVTISNPTRHVYTG-GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG 109
Query: 64 PIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF--HHEYPWILSASDDQTIRIWN 121
+ GG+ + +W+ + S D I +W+
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 122 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA--- 178
++ + GH C + + LD T+R WD+ R+
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFS 229
Query: 179 -----------DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSI 227
+ + + H + V + F + VS +D +
Sbjct: 230 LGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLL 289
Query: 228 RLWDMTKRTCLNTFRREQERF---WS---EVIVSNAEDKSIRLWD 266
W + + S + IV+ + DK +++
Sbjct: 290 NAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 77.2 bits (188), Expect = 1e-15
Identities = 15/129 (11%), Positives = 41/129 (31%), Gaps = 2/129 (1%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDY 95
+ + + + + +++ G + + + + L H
Sbjct: 209 SWDLREGRQLQQHDFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPDKYQLHLHESC 267
Query: 96 IRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 155
+ + F + W +S D + W I + + V+ D +V+ S
Sbjct: 268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISVDDKYIVTGSG 326
Query: 156 DQTIRVWDI 164
D+ V+++
Sbjct: 327 DKKATVYEV 335
Score = 67.9 bits (164), Expect = 1e-12
Identities = 36/286 (12%), Positives = 68/286 (23%), Gaps = 30/286 (10%)
Query: 49 EHEGPVRGICFHNQQPIFVSGGDDYKIKVWN-----YKQRKCIFTLLGHLDYIRTTFFHH 103
H V + N +GG +KVW+ K L +YIR+
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGGKG-CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 104 EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 163
+ ++ + T+ IW+ + + C + D V S +
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 164 ISGLRKKNVAPGMGADDRQI-----------------KLWRMNDSKAWEVDIFRGHYNNV 206
+ V G D R D + + +
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW------SEVIVSNAEDK 260
+ + P E + E ++ + + K E + VS +D
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287
Query: 261 SIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVF 306
+ W + +E G
Sbjct: 288 LLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATV 332
Score = 53.7 bits (127), Expect = 5e-08
Identities = 21/194 (10%), Positives = 53/194 (27%), Gaps = 7/194 (3%)
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ Q V D I + + I TL H + + + + + +++W
Sbjct: 20 DGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGGKG-CVKVW 77
Query: 121 NWQSRNCICVLT-----GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 175
+ ++ ++Y+ + P ++ T+ +WD++ + A
Sbjct: 78 DISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137
Query: 176 MGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKR 235
+ L DSK G+ + I + + +
Sbjct: 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK 197
Query: 236 TCLNTFRREQERFW 249
+
Sbjct: 198 LWTGGLDNTVRSWD 211
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 78.8 bits (192), Expect = 4e-16
Identities = 51/237 (21%), Positives = 94/237 (39%), Gaps = 9/237 (3%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 109
H V C + ++G DD I+V++ +K + L GH + + H ++
Sbjct: 11 HMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILV 68
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHN--HYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 167
S S D+T+R+W+ + C V GHN + + +V+ S D T+ VW L
Sbjct: 69 SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK---L 125
Query: 168 RKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSI 227
K++ P G + ++ + + V + RGH +V ++VS + D ++
Sbjct: 126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT--VSGHGNIVVSGSYDNTL 183
Query: 228 RLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
+WD+ + CL +R +S + + D T R
Sbjct: 184 IVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240
Score = 76.9 bits (187), Expect = 2e-15
Identities = 39/328 (11%), Positives = 96/328 (29%), Gaps = 44/328 (13%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK 74
L F ++++ + +I+++D L + H+G V + + + + D
Sbjct: 19 LQFEDN--YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTV 76
Query: 75 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWNWQSRNCI----- 128
K + ++ +I++ S D T+ +W + +
Sbjct: 77 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGE 136
Query: 129 ----------------CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV 172
V H +IVVS S D T+ VWD++ ++ +
Sbjct: 137 EHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYI 196
Query: 173 APGMGADDRQIK--------LWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAED 224
G + D+ D+ G + +S+
Sbjct: 197 LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFL 256
Query: 225 KSIRLWDMTKRTCLNTFRREQERFWSEV-----------IVSNAEDKSIRLWDMTKRTCL 273
S + N + R+ + + I+ + + ++++ +
Sbjct: 257 VSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLV 316
Query: 274 -NTFRREQERFWVLVAHPTLNLFAAGHD 300
++ ++ W + + A D
Sbjct: 317 HANILKDADQIWSVNFKGKTLVAAVEKD 344
Score = 57.6 bits (137), Expect = 3e-09
Identities = 45/238 (18%), Positives = 77/238 (32%), Gaps = 18/238 (7%)
Query: 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV 67
+ V L P ++ + H VR I V
Sbjct: 118 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR--TVSGHGNIVV 175
Query: 68 SGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC 127
SG D + VW+ Q KC++ L GH D I +T + HE +SAS D TIRIW+ ++
Sbjct: 176 SGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 235
Query: 128 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM----------- 176
+ L GH V + + +A + + +
Sbjct: 236 MYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDN 295
Query: 177 ---GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
+ Q ++ + K + + V F K+ ++ + +D L
Sbjct: 296 ILVSGSENQFNIYNLRSGKLVHA-NILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEI 351
Score = 56.8 bits (135), Expect = 5e-09
Identities = 12/109 (11%), Positives = 26/109 (23%), Gaps = 3/109 (2%)
Query: 58 CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 117
F+ H + T F+ IL + +
Sbjct: 247 GLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVS-DNILVSGSENQF 305
Query: 118 RIWNWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 165
I+N +S + + + F +V + D + +
Sbjct: 306 NIYNLRSGKLVHANILKDADQIWSVNFKG-KTLVAAVEKDGQSFLEILD 353
Score = 56.8 bits (135), Expect = 5e-09
Identities = 24/210 (11%), Positives = 53/210 (25%), Gaps = 35/210 (16%)
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMN 189
L GH V+ D+ V++ + D+ IRV+D +
Sbjct: 7 TLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKK--------------------- 44
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 249
+ GH V + + ++ + +
Sbjct: 45 -----FLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRC 99
Query: 250 S--------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDA 301
+ IV+ + D ++ +W + K + + E + V F
Sbjct: 100 LDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 159
Query: 302 GMVVFKFERERPAYTVHNNVMYYVKERFLH 331
M + V + + +
Sbjct: 160 HMASVRTVSGHGNIVVSGSYDNTLIVWDVA 189
Score = 51.8 bits (122), Expect = 2e-07
Identities = 13/88 (14%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCI-FTLLGHLD 94
+ N KF H + I + G + + ++N + K + +L D
Sbjct: 266 RGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDAD 325
Query: 95 YIRTTFFHHEYPWILSASDDQTIRIWNW 122
I + F + + + D +
Sbjct: 326 QIWSVNFKGKT-LVAAVEKDGQSFLEIL 352
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 77.6 bits (189), Expect = 6e-16
Identities = 41/311 (13%), Positives = 95/311 (30%), Gaps = 50/311 (16%)
Query: 7 TKSARVKGLSFHPKRPWILS-SLHNGVIQLWDYRMNTL--LEKFDEHEG-PVRGICFHNQ 62
T+ LS+ P I + ++ D + + + +F H V + F
Sbjct: 15 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI 74
Query: 63 QP--IFVSGGDDYKIKVWNYKQRKCIFTLL--------GHLDYIRTTFFHHE--YPWILS 110
+ SG + K+ VW + K ++ I + E ++
Sbjct: 75 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134
Query: 111 ASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK- 169
D +W S N + ++GH+ + + + D V+ K
Sbjct: 135 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF 194
Query: 170 -----------------------KNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNV 206
+G+D + + ++ +
Sbjct: 195 SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG 254
Query: 207 SCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW----------SEVIVSN 256
L S+ + D +IR+WD+T C+ + ++++ + I+S
Sbjct: 255 IFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL 314
Query: 257 AEDKSIRLWDM 267
+ D ++ +++
Sbjct: 315 SLDGTLNFYEL 325
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 76.3 bits (186), Expect = 2e-15
Identities = 20/322 (6%), Positives = 70/322 (21%), Gaps = 33/322 (10%)
Query: 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFH-NQQPIFVSGGD 71
G + +++ + + + + D +T+ + + + + +V
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 72 DYKIKVWNYKQRKCIFTL------LGHLDYIRTTFFHHEYPWILSASDDQT--------- 116
I + K F + + + + + +
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120
Query: 117 ---IRIWNWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 171
+ +++ + V + + V+ + V
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALP 180
Query: 172 VAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
+ +R+ + F + + D
Sbjct: 181 L----RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 236
Query: 232 MTKRTCLNTFRREQERFWSEVI-------VSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
+ + + + + +D+ +R + + +
Sbjct: 237 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYC 296
Query: 285 VLVAHPTLNLFAAGHDAGMVVF 306
V L+ G + VF
Sbjct: 297 VAFDKKGDKLYLGGTFNDLAVF 318
Score = 61.3 bits (147), Expect = 2e-10
Identities = 23/261 (8%), Positives = 59/261 (22%), Gaps = 29/261 (11%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT----LLEKFDEHEGPVRG 56
+ + + + P + ++++ Y + + D E
Sbjct: 80 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR 139
Query: 57 ICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
+Q + DD + V K + ++
Sbjct: 140 TFPMPRQVYLMRAADDGSLYVAGPDIYKMDV----KTGKYTVALPLRNWNRKGYSAP-DV 194
Query: 117 IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 176
+ W QS A+F +A L D+ +
Sbjct: 195 LYFWPHQSPRHEFS-----MLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD 249
Query: 177 G----------ADDRQIKLWRMNDSKAWEVDIFR-----GHYNNVSCVLFHPKSEVIVSN 221
D +N +++ + + CV F K + +
Sbjct: 250 LTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLG 309
Query: 222 AEDKSIRLWDMTKRTCLNTFR 242
+ +++ + +
Sbjct: 310 GTFNDLAVFNPDTLEKVKNIK 330
Score = 59.0 bits (141), Expect = 1e-09
Identities = 21/179 (11%), Positives = 41/179 (22%), Gaps = 7/179 (3%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ K + K+ + S + + E F
Sbjct: 164 DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPR------HEFSMLYTIARFK 217
Query: 61 NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
+ + + Y + K K L + T + +
Sbjct: 218 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKY 277
Query: 121 NWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGAD 179
+ + R I +H C F D + + V++ L K G D
Sbjct: 278 DLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGD 335
Score = 40.5 bits (93), Expect = 7e-04
Identities = 25/316 (7%), Positives = 56/316 (17%), Gaps = 58/316 (18%)
Query: 143 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGH 202
+ ++ + + V D+ A D K M
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDV-------------ASDTVYKSCVM------------PD 38
Query: 203 YNNVSCVLFHP-KSEVIVSNAEDKSIRLWDMTKRTCLN------------------TFRR 243
+ P V N I D+
Sbjct: 39 KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP 98
Query: 244 EQERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFA 296
+ + + + + ++ R V + +
Sbjct: 99 DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL 158
Query: 297 AGHDAGMVVFKFERERPAYTV--HNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPA 354
+ + + + N + S L R
Sbjct: 159 YVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 218
Query: 355 HSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNR 414
+ + + T + + + + ++ NR
Sbjct: 219 DKQDPATADLLYGYLSVDL-----KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR 273
Query: 415 FAVLDRNHTILIKNLK 430
A D LIK
Sbjct: 274 LAKYDLKQRKLIKAAN 289
Score = 28.6 bits (62), Expect = 4.3
Identities = 3/45 (6%), Positives = 13/45 (28%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPV 54
++F K + + +++ ++ G +
Sbjct: 292 HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM 336
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 73.5 bits (178), Expect = 1e-14
Identities = 37/287 (12%), Positives = 81/287 (28%), Gaps = 27/287 (9%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFV 67
+ + LS + S+ G I WD F D H + GI ++ +F
Sbjct: 12 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71
Query: 68 SGGDDY--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 125
DD+ + + ++A + +
Sbjct: 72 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 131
Query: 126 ---------------NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 170
+ V G + + ++ + ++
Sbjct: 132 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG 191
Query: 171 NVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLW 230
+ I N+ + + + H V+CV + P + + + + D S+ +W
Sbjct: 192 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 251
Query: 231 DMTKRTCLNTFRREQER-------FWS--EVIVSNAEDKSIRLWDMT 268
+M K + + W IVS +D +I+ W++
Sbjct: 252 NMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
Score = 66.2 bits (159), Expect = 3e-12
Identities = 27/282 (9%), Positives = 61/282 (21%), Gaps = 27/282 (9%)
Query: 50 HEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWI 108
H + + S + I W+ H I +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF 70
Query: 109 LSASDDQTIRIWNWQS--RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
+ DD + S + V + + DI V+A
Sbjct: 71 TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL 130
Query: 167 LRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKS----------- 215
K + + +V +++ +VS V
Sbjct: 131 TEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNN 190
Query: 216 -----------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRL 264
+VI + + + + + + + D S+ +
Sbjct: 191 GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV 250
Query: 265 WDMTKRTCLNTFRREQERFWVL--VAHPTLNLFAAGHDAGMV 304
W+M K + + + V + +
Sbjct: 251 WNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNI 292
Score = 59.2 bits (141), Expect = 7e-10
Identities = 18/203 (8%), Positives = 41/203 (20%), Gaps = 1/203 (0%)
Query: 84 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLT-GHNHYVMCAQ 142
GH I + + SA + I W+ + V H + +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 143 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGH 202
D+ + D V + A + + L D ++
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 203 YNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSI 262
L S + + + + + + I
Sbjct: 123 AIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 182
Query: 263 RLWDMTKRTCLNTFRREQERFWV 285
+ + +
Sbjct: 183 TSVAFSNNGAFLVATDQSRKVIP 205
Score = 50.4 bits (118), Expect = 5e-07
Identities = 16/127 (12%), Positives = 34/127 (26%)
Query: 198 IFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNA 257
+ GH ++ + + + S + I WD++ F + + ++
Sbjct: 7 VRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 66
Query: 258 EDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTV 317
D WD + V + L A G + + A
Sbjct: 67 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 126
Query: 318 HNNVMYY 324
H +
Sbjct: 127 HGKLTEV 133
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 73.3 bits (178), Expect = 2e-14
Identities = 25/294 (8%), Positives = 64/294 (21%), Gaps = 32/294 (10%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR---------GICFHNQQPIFVSGGDD 72
I ++++D + + P + + +F
Sbjct: 69 SRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 128
Query: 73 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL- 131
+ V + + + L Y F D ++ + + +
Sbjct: 129 PAVGVVDLEGKAFKRMLDVPDCYHI---FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH 185
Query: 132 -----TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLW 186
+ + +V + I D+S K + + +
Sbjct: 186 TEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADG 245
Query: 187 RMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQE 246
H L + + + + + D L F
Sbjct: 246 WRPG----GWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH- 300
Query: 247 RFWS---------EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
S + + DK++ + D L + + V+
Sbjct: 301 EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354
Score = 67.1 bits (162), Expect = 3e-12
Identities = 21/236 (8%), Positives = 54/236 (22%), Gaps = 14/236 (5%)
Query: 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDY 73
L+ K + + D D + + + G
Sbjct: 112 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLA 171
Query: 74 KIKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC--I 128
K+ + T I + + ++ + I + S + +
Sbjct: 172 KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFL 231
Query: 129 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRM 188
+ + P V+ + + R + +
Sbjct: 232 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRH----KTASRFVVVL-- 285
Query: 189 NDSKAWEVDIFRGHYNNVSCVLFHP--KSEVIVSNAEDKSIRLWDMTKRTCLNTFR 242
D+K E + + + K + + DK++ + D L +
Sbjct: 286 -DAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 340
Score = 45.2 bits (105), Expect = 3e-05
Identities = 15/168 (8%), Positives = 38/168 (22%), Gaps = 25/168 (14%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFH 60
+ ++ K ++ + G I D L + R +
Sbjct: 188 VFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWR 247
Query: 61 NQQPIFVSGGDDYK--------------------IKVWNYKQRKCIFTLLGHLDYIRTTF 100
V+ + V + K + + I +
Sbjct: 248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSIN 306
Query: 101 FHH--EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPT 146
+ ++ D+T+ I + +S + + H
Sbjct: 307 VSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354
Score = 33.6 bits (75), Expect = 0.11
Identities = 30/313 (9%), Positives = 62/313 (19%), Gaps = 59/313 (18%)
Query: 110 SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHP----------TDDIVVSASLDQTI 159
+ + + ++ I ++ G + +
Sbjct: 23 HFAAVTQQFVIDGEAGRVIGMIDGGFLPNP--VVADDGSFIAHASTVFSRIARGERTDYV 80
Query: 160 RVWDISGLRKKNVAP--------------GMGADDRQIKLWRMNDSKAW----------- 194
V+D L L S A
Sbjct: 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 140
Query: 195 -------EVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQER 247
+ + + + T+
Sbjct: 141 FKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHP 200
Query: 248 FWSE---VIVSNAEDKSIRLWDMT--KRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAG 302
+S+ +V I D++ L E P A H A
Sbjct: 201 AYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 260
Query: 303 MVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNAT 362
++ +R + RF+ LD + + + G I SI+ +
Sbjct: 261 DRIYLLVDQRDEWRHKTA------SRFVVVLDAKTGE--RLAKFEMGHEI--DSINVSQD 310
Query: 363 EHSILVTTRNANN 375
E +L +
Sbjct: 311 EKPLLYALSTGDK 323
Score = 30.9 bits (68), Expect = 0.69
Identities = 6/41 (14%), Positives = 14/41 (34%)
Query: 816 ADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKH 856
+ D + R + + + V + D + +A S
Sbjct: 27 VTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTV 67
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 69.5 bits (168), Expect = 5e-13
Identities = 23/269 (8%), Positives = 58/269 (21%), Gaps = 30/269 (11%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
+ + + L G + + ++ F + + G I
Sbjct: 103 ANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 162
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNC-------IC 129
V++ + RK + F + + S + N
Sbjct: 163 VYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPF 221
Query: 130 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMN 189
V+ + P + D + ++
Sbjct: 222 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYK-------------------RSSPINVD 262
Query: 190 DSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 249
+ S + + E + +D+ R +
Sbjct: 263 PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRL 322
Query: 250 S---EVIVSNAEDKSIRLWDMTKRTCLNT 275
S + ++ +D I + + K T
Sbjct: 323 SADRKTVMVRKDDGKIYTFPLEKPEDERT 351
Score = 48.3 bits (113), Expect = 2e-06
Identities = 7/109 (6%), Positives = 25/109 (22%), Gaps = 4/109 (3%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
+ D ++ + + + + ++ K
Sbjct: 248 DLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT 307
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
RK + + + + ++ DD I + + +
Sbjct: 308 RK----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
Score = 46.8 bits (109), Expect = 9e-06
Identities = 20/260 (7%), Positives = 52/260 (20%), Gaps = 24/260 (9%)
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLD--QTIRVWDI 164
I S Q I + + + + + + ++D
Sbjct: 17 LIAFVSRGQ-AFIQDVSGTYV--LKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDY 73
Query: 165 SGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAED 224
G ++ + + + + N + E +
Sbjct: 74 RT----------GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 123
Query: 225 KSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
+S N+ ++I ++DM R +
Sbjct: 124 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYA 183
Query: 285 VLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVM 344
+ NL+ + + P+ + + L +
Sbjct: 184 PAFDADSKNLYYLSYRSLD---------PSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTK 234
Query: 345 QLRGGGRIPAHSISYNATEH 364
+ A N
Sbjct: 235 LVPRSMTSEAGEYDLNDMYK 254
Score = 45.2 bits (105), Expect = 3e-05
Identities = 24/234 (10%), Positives = 49/234 (20%), Gaps = 31/234 (13%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
FVS G + + + + + IR + + + +
Sbjct: 19 AFVSRG---QAFIQDVSGTYVL--KVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDY 73
Query: 125 RN-CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQI 183
R + V V A+ I D
Sbjct: 74 RTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTV----------------DLETG 117
Query: 184 KLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRR 243
K + S+ + F N+ P ++I ++DM R
Sbjct: 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 177
Query: 244 EQERFWSEV------IVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT 291
+ + + D + +V+ P
Sbjct: 178 NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNF---SFEVVSKPFVIPLIPG 228
Score = 41.4 bits (95), Expect = 5e-04
Identities = 9/78 (11%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGD 71
+ + GV+ +D + + E + + + + + D
Sbjct: 279 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVKNNLTDLRLSADRKTVMVRKD 334
Query: 72 DYKIKVWNYKQRKCIFTL 89
D KI + ++ + T+
Sbjct: 335 DGKIYTFPLEKPEDERTV 352
Score = 32.5 bits (72), Expect = 0.21
Identities = 28/286 (9%), Positives = 63/286 (22%), Gaps = 35/286 (12%)
Query: 141 AQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIF 199
F P D D++ S Q + D+SG V
Sbjct: 8 EDFSPLDGDLIAFVSRGQ-AFIQDVSGTYVLKV--------------------------- 39
Query: 200 RGHYNNVSCVLFHPKSEVIV--SNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNA 257
+ V ++V E + ++D E + V
Sbjct: 40 -PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA--EKFEENLGNVFAMGVDRN 96
Query: 258 EDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTV 317
++ D + ++ + + + + + +
Sbjct: 97 GKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY 156
Query: 318 HNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFE 377
++ T + +SY + + S N +
Sbjct: 157 VMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV 216
Query: 378 NS-TYDLYMIPKEESERKEVADGKRSTGISAVWVARNRFAVLDRNH 422
S + + +IP + K V S + +
Sbjct: 217 VSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVD 262
Score = 28.7 bits (62), Expect = 4.0
Identities = 6/38 (15%), Positives = 11/38 (28%)
Query: 817 DHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLS 854
+ DV L + + R+V D +
Sbjct: 24 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHG 61
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 67.3 bits (162), Expect = 1e-12
Identities = 15/108 (13%), Positives = 30/108 (27%), Gaps = 2/108 (1%)
Query: 58 CFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 117
+ + + I + E + + S D I
Sbjct: 180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 239
Query: 118 RIWNWQS-RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 164
I++ + I L H V + +VS+ D I+ W++
Sbjct: 240 FIYSVKRPMKIIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWNV 286
Score = 59.6 bits (142), Expect = 4e-10
Identities = 28/282 (9%), Positives = 67/282 (23%), Gaps = 33/282 (11%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ + L+ +P ++S ++G I W +H + + Q
Sbjct: 13 NKGITALTVNP----LISGSYDGRIMEWS-----SSSMHQDHSNLIVSLDNSKAQEYSSI 63
Query: 69 GGDDYKIKVWNYKQRKCIFT-----------LLGHLDYIRTTFFHHEYPWILSASDDQTI 117
DD K + D I S +
Sbjct: 64 SWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPG 123
Query: 118 RIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG 177
+ L N + + L IS A +
Sbjct: 124 SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVM 183
Query: 178 ADDRQIKL------WRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWD 231
L + +++ + +++ + + D +I ++
Sbjct: 184 GKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYS 243
Query: 232 M-TKRTCLNTFRREQERFWS------EVIVSNAEDKSIRLWD 266
+ + ++ + +VS+ D I+ W+
Sbjct: 244 VKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWN 285
Score = 58.0 bits (138), Expect = 2e-09
Identities = 28/285 (9%), Positives = 70/285 (24%), Gaps = 34/285 (11%)
Query: 41 NTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 100
+ +L+ H + + + +SG D +I W+ H + I +
Sbjct: 3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLD 53
Query: 101 FHHE------YPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS 154
+ T + Q + G +
Sbjct: 54 NSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDI 113
Query: 155 LDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK 214
+ S + +G ++ D+ S + P
Sbjct: 114 IKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS 173
Query: 215 SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW------------------SEVIVSN 256
I + I L+D+ R + + +++ +
Sbjct: 174 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 233
Query: 257 AEDKSIRLWDM-TKRTCLNTFRREQERFWVLVAHPTLNLFAAGHD 300
+ D +I ++ + + ++ L+ L ++G D
Sbjct: 234 SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGAD 278
Score = 49.2 bits (115), Expect = 1e-06
Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 9/69 (13%)
Query: 82 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCA 141
+ + T+ GH I + ++S S D I W+ S + H++ ++
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS-----MHQDHSNLIVSL 52
Query: 142 QFHPTDDIV 150
+
Sbjct: 53 DNSKAQEYS 61
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 63.7 bits (153), Expect = 3e-11
Identities = 21/311 (6%), Positives = 70/311 (22%), Gaps = 30/311 (9%)
Query: 21 RPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFH-NQQPIFVSGGDDYKIKV 77
R +IL+ + + D + + + + + + +
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 78 WNYKQRKCIFTLLGHLDYIRTTF-----FHHEYPWILSASDDQTIRIWNWQSRNCICVLT 132
+ + + + R + + + + +++ + L
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 133 -----------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDR 181
+ + + D + + L +
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVED-----KPIQSW 175
Query: 182 QIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTF 241
+ + + D A + A + D+
Sbjct: 176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235
Query: 242 RREQERFWSEVIVSNAE------DKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLF 295
R + F+ V+ A+ + +D+ K + + V V+ ++
Sbjct: 236 VRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVW 295
Query: 296 AAGHDAGMVVF 306
G + +
Sbjct: 296 LGGALGDLAAY 306
Score = 58.7 bits (140), Expect = 1e-09
Identities = 20/295 (6%), Positives = 55/295 (18%), Gaps = 25/295 (8%)
Query: 4 KFETKSARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-- 60
P + + + D L + D R
Sbjct: 28 TIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGA 87
Query: 61 ----NQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 116
+ + + + Q + R F +L+ + D +
Sbjct: 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS 147
Query: 117 --------IRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
+ + + ++ + + P V + + R
Sbjct: 148 KLYGLGRDLHVMDPEAGTLVEDKPIQSWEAET-YAQPDVLAVWNQHESSGVMATPFYTAR 206
Query: 169 KKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
K A + + + + R +P +
Sbjct: 207 KDIDPADPTAYRTGLLTMDLETGEMAMRE-VRIMDVFYFSTAVNPAKTRAFGA--YNVLE 263
Query: 229 LWDMTKRTCLNTFRREQERFW------SEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
+D+ K + + + + +D
Sbjct: 264 SFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318
Score = 43.3 bits (100), Expect = 1e-04
Identities = 11/123 (8%), Positives = 24/123 (19%), Gaps = 15/123 (12%)
Query: 216 EVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW----------SEVIVSNAEDKSIRLW 265
+ I++ A + + D K + + +S+
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 266 DMTKRTCLNTFRREQERFWV-----LVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNN 320
D+ L V P A + +P +
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 321 VMY 323
Sbjct: 122 AET 124
Score = 41.7 bits (96), Expect = 3e-04
Identities = 21/274 (7%), Positives = 58/274 (21%), Gaps = 63/274 (22%)
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNH--YVMCAQFHPTDDIV-VSASLDQTIRVWD 163
+IL+ + + + + + V+T + M P I + + +++ D
Sbjct: 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62
Query: 164 ISGLRKKNVAPGMGA--------------------------------DDRQIKLWRMNDS 191
+ + Q + D+
Sbjct: 63 LVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDA 122
Query: 192 KAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSE 251
+ ++ + + + D + + + + +++
Sbjct: 123 ETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQ 182
Query: 252 V----------------------------IVSNAEDKSIRLWDMTKRTCLNTFRREQERF 283
A + D+ R + F
Sbjct: 183 PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242
Query: 284 WVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTV 317
+ A A G + F E+ V
Sbjct: 243 YFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRV 276
Score = 40.6 bits (93), Expect = 7e-04
Identities = 4/128 (3%), Positives = 27/128 (21%), Gaps = 2/128 (1%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ + + + D + + N
Sbjct: 197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA- 255
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
G ++ ++ ++ I + + + + + ++ ++
Sbjct: 256 FGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314
Query: 129 CVLTGHNH 136
+ +
Sbjct: 315 GQVDLPGN 322
Score = 38.2 bits (87), Expect = 0.003
Identities = 21/246 (8%), Positives = 55/246 (22%), Gaps = 49/246 (19%)
Query: 148 DIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVS 207
D +++ + + V D K+ + D
Sbjct: 2 DYILAPARPDKLVVIDT-------------EKMAVDKVITIAD-----------AGPTPM 37
Query: 208 CVLFHP-KSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNA--------- 257
+ P + + +S+ D+ L + + A
Sbjct: 38 VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLA 97
Query: 258 ---------------EDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAG 302
+ + L+D + F ++ + A L+ G D
Sbjct: 98 IYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLH 157
Query: 303 MVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNAT 362
++ + + + + + + + V+ R A
Sbjct: 158 VMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAY 217
Query: 363 EHSILV 368
+L
Sbjct: 218 RTGLLT 223
Score = 27.5 bits (59), Expect = 8.4
Identities = 3/49 (6%), Positives = 10/49 (20%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
++ + G + +D + D +
Sbjct: 279 PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSL 327
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 62.7 bits (151), Expect = 5e-11
Identities = 16/233 (6%), Positives = 48/233 (20%), Gaps = 19/233 (8%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYK-IKVWNYK 81
+ + + + E + + + F + + K + V
Sbjct: 88 RLYVANITPAASVTVIDAVSKK-MLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDA 146
Query: 82 QRKCI---FTLLGHLDYIRTTFFHHEY--PWILSASDDQTIRIWNWQSRN--CICVLTGH 134
K + F + L + +R ++ +
Sbjct: 147 NGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLL 206
Query: 135 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRKKNVAPGMGADDRQIKLWRMNDSKA 193
+ P + Q + G + PG ++ + +
Sbjct: 207 TDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVW-----VYDLKSKQR 261
Query: 194 WEVDIFRGHY-NNVSCVLFHP--KSEVIVSNAEDKSIRLWDMTKRTCLNTFRR 243
+ + K A + + D + ++
Sbjct: 262 VARWDLAQQKVEPLVSIQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQ 313
Score = 49.6 bits (117), Expect = 1e-06
Identities = 16/228 (7%), Positives = 46/228 (20%), Gaps = 50/228 (21%)
Query: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMC---AQFHPTDD---IVVSASLD 156
+ + + I + + + + + + A++
Sbjct: 36 TYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANIT 95
Query: 157 QTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSE 216
V I + KK ++ + +CVL +P +
Sbjct: 96 PAASVTVIDAVSKKMLS----------------------------EIDTAACVLAYPAGD 127
Query: 217 -VIVSNAED-KSIRLWDMTKRTCLNT-FRREQERFWSEV-----------IVSNAEDKSI 262
+ E K++ + + + ++
Sbjct: 128 DRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNV 187
Query: 263 RLWDMTKRT--CLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKF 308
R D + + + P A +
Sbjct: 188 RSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVL 235
Score = 29.2 bits (64), Expect = 2.6
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 821 LFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLS 854
++D K+ L Q+ +PD + +
Sbjct: 2 VYDADAKKLLGQIDGGFGPGFAIAPDRKASVVAT 35
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 61.9 bits (149), Expect = 2e-10
Identities = 11/242 (4%), Positives = 48/242 (19%), Gaps = 20/242 (8%)
Query: 10 ARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
RV + +L + + +
Sbjct: 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI---HPGAAATHYL 180
Query: 69 GGDDYKIKVWNYKQRKCI------FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 122
G + + + ++ + + +
Sbjct: 181 GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPA 240
Query: 123 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQ 182
+ G+ F +V+ + + + +A
Sbjct: 241 AGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA-----EN 295
Query: 183 IKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP--KSEVIVSNAEDKSIRLWDMTKRTCLNT 240
+ + + ++ ++ S+ ++A + + ++D ++
Sbjct: 296 TSSV---TASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSS 352
Query: 241 FR 242
Sbjct: 353 VE 354
Score = 54.6 bits (130), Expect = 3e-08
Identities = 14/269 (5%), Positives = 53/269 (19%), Gaps = 32/269 (11%)
Query: 31 GVIQLWDYRMNTLLEKFDEHEGPV-------RGICFH-NQQPIFVSGGDDYKIKVWNYKQ 82
++++D + + + P I + + +
Sbjct: 96 DYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPG 155
Query: 83 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
+ S ++ + + V
Sbjct: 156 ASDDQLTKSASCF---HIHPGAAATHYLGSCPASLAASDLAAA------PAAAGIVGAQC 206
Query: 143 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGH 202
+ +A + + + A N+S +
Sbjct: 207 TGAQNCSSQAAQANYPGMLV-WAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265
Query: 203 YNNVSC------VLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW------- 249
+ V+ ++ A ++ + +
Sbjct: 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDG 325
Query: 250 -SEVIVSNAEDKSIRLWDMTKRTCLNTFR 277
S+ ++A + + ++D ++
Sbjct: 326 ASDNYANSAGTEVLDIYDAASDQDQSSVE 354
Score = 33.4 bits (75), Expect = 0.13
Identities = 17/256 (6%), Positives = 52/256 (20%), Gaps = 48/256 (18%)
Query: 139 MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDI 198
A + D A R P A + + +
Sbjct: 15 AAASDGSSCDHGPGAI-----------SRRSHITLPAYFAGTTENWVSCAGCGVT--LGH 61
Query: 199 FRGHYNNVSCVLFHPKSEVIVSN---------AEDKSIRLWDMTKRTCLNTFRREQERFW 249
G + +++ V H S+ +++ + ++D + +
Sbjct: 62 SLGAFLSLA-VAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 120
Query: 250 ---------------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNL 294
+ ++ + + + + + +
Sbjct: 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKS--ASCFHIHPGAAATH 178
Query: 295 FAAGHDAGMVVFKFERER--------PAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQL 346
+ A + N + + L + + +
Sbjct: 179 YLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDI 238
Query: 347 RGGGRIPAHSISYNAT 362
G +I N +
Sbjct: 239 PAAGATMKAAIDGNES 254
Score = 28.4 bits (62), Expect = 5.0
Identities = 6/45 (13%), Positives = 8/45 (17%)
Query: 816 ADHVILFDVQQKRALAQVKVAKCRHVVWSPDMTHLALLSKHTLHI 860
+ L A V + AL S
Sbjct: 45 TTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARS 89
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 61.1 bits (147), Expect = 3e-10
Identities = 28/287 (9%), Positives = 75/287 (26%), Gaps = 21/287 (7%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL-----LEKFDEHEGPVRG 56
+ +T A V ++L + I + D ++ E
Sbjct: 55 VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESS 113
Query: 57 ICFHNQ-QPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE-YPWILSASDD 114
+ + + + + + + + + T +H E + AS +
Sbjct: 114 KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 173
Query: 115 QTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 174
I N + + ++ + + + D + R + + VA
Sbjct: 174 HPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAV 233
Query: 175 GMGADDRQIKLWRMNDSKAWE--VDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDM 232
D R L + + + Y V + + + K+ +
Sbjct: 234 IDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAW 293
Query: 233 TKRTCLNT---------FRREQERFWSEVIVSN--AEDKSIRLWDMT 268
K L + + + + +S+ ++D+
Sbjct: 294 KKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 340
Score = 49.2 bits (116), Expect = 2e-06
Identities = 22/228 (9%), Positives = 55/228 (24%), Gaps = 30/228 (13%)
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
V+ D +I + + +K + + + + ++L D I + +
Sbjct: 31 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMID 89
Query: 122 WQSRNC-----ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 176
++ I + D ++ + M
Sbjct: 90 LWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAI-------------M 136
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRT 236
+ + K + + + + H E IV+ E + L +
Sbjct: 137 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 196
Query: 237 CLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW 284
L F ++ WD + R + +
Sbjct: 197 NLTVTSIGAAPFLADG-----------GWDSSHRYFMTAANNSNKVAV 233
Score = 41.9 bits (97), Expect = 3e-04
Identities = 32/250 (12%), Positives = 69/250 (27%), Gaps = 34/250 (13%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKI 75
S + V+ + ++ L + + + F++ ++
Sbjct: 171 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNK 230
Query: 76 KVW-----NYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWNWQSRN--- 126
H P W S D +I + +N
Sbjct: 231 VAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ 290
Query: 127 ----CICVLTGHNHYVMCAQFHPTDDIVV-------SASLDQTIRVWDISGLRK----KN 171
+ L G + + HP + A + Q++ V+D+ L
Sbjct: 291 YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP 350
Query: 172 VAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFH-PKSEVIVSNAEDKSIRLW 230
+A + ++ + +K G S S ++V + DK+++L
Sbjct: 351 IAEWADLGEGAKRVVQPEYNKR-------GDEVWFSVWNGKNDSSALVVVD--DKTLKLK 401
Query: 231 DMTKRTCLNT 240
+ K L T
Sbjct: 402 AVVKDPRLIT 411
Score = 38.4 bits (88), Expect = 0.004
Identities = 23/231 (9%), Positives = 47/231 (20%), Gaps = 30/231 (12%)
Query: 145 PTDDIVVSASLDQTIRVWDISGLRKKNVAPG-----------------MGADDRQIKLWR 187
+ V+ I + D + V + D +I +
Sbjct: 30 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMID 89
Query: 188 MNDSK---AWEVDIFRGHYNNVSCVLFHPKS-EVIVSNAEDKSIRLWDMTKRTCLNTFRR 243
+ + E+ I + S + I + D
Sbjct: 90 LWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST 149
Query: 244 EQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG----- 298
++ +I +N +E + ++ NL
Sbjct: 150 RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV--KETGKVLLVNYKDIDNLTVTSIGAAP 207
Query: 299 --HDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLR 347
D G A + + K+R L L
Sbjct: 208 FLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN 258
Score = 34.5 bits (78), Expect = 0.056
Identities = 16/160 (10%), Positives = 35/160 (21%), Gaps = 15/160 (9%)
Query: 186 WRMNDSKA-WEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRRE 244
W M + + W+V + + V+ + I L D + +
Sbjct: 2 WGMPEMRESWKVLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG 61
Query: 245 QERFW-------SEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL----- 292
++V D I + D+ + + V
Sbjct: 62 YAVHISRMSASGRYLLVIG-RDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYED 120
Query: 293 -NLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLH 331
A + + + V + H
Sbjct: 121 RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYH 160
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 59.4 bits (143), Expect = 1e-09
Identities = 27/234 (11%), Positives = 59/234 (25%), Gaps = 32/234 (13%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
V+ D +I + + + L + + ++ D + + +
Sbjct: 34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWM 92
Query: 125 RNC-----ICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGA 178
+ I + + D + A + D
Sbjct: 93 KEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD--------------G 138
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+ + K + ++ + + + H + E IV+ E I L D T L
Sbjct: 139 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL 198
Query: 239 NTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTL 292
T ERF + D + R + + + L
Sbjct: 199 KTTEISAERFLHDG-----------GLDGSHRYFITAANARNKLVVIDTKEGKL 241
Score = 47.5 bits (112), Expect = 5e-06
Identities = 24/215 (11%), Positives = 54/215 (25%), Gaps = 23/215 (10%)
Query: 30 NGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGDDY--KIKVWNYKQR--K 84
G I L D + D + + +FV G D I +W +
Sbjct: 41 AGQIALIDGSTYEIKTVLDTGYAV-HISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 99
Query: 85 CIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQF 143
I + E + + A I + ++ + + ++
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 159
Query: 144 HPTDDIV-VSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGH 202
HP + + AS + + ++ + +I L D +
Sbjct: 160 HPEPRVAAILASHYRPEFIVNVK-------------ETGKILLVDYTDLNNLKTTEIS-A 205
Query: 203 YNNVSCVLFHP-KSEVIVSNAEDKSIRLWDMTKRT 236
+ I + + + D +
Sbjct: 206 ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 240
Score = 38.6 bits (89), Expect = 0.003
Identities = 39/419 (9%), Positives = 91/419 (21%), Gaps = 84/419 (20%)
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
+ ++ D I + + + VL + V ++ + + D + + D+
Sbjct: 34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWM 92
Query: 167 LRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
VA E+ I + + + +
Sbjct: 93 KEPTTVA---------------------EIKIGSEARSIETSKMEGWED----------- 120
Query: 227 IRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVL 286
I + D +
Sbjct: 121 -----------------------KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQ 157
Query: 287 VAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVM-- 344
HP ++ R V + + DL N K + +
Sbjct: 158 EYHP-------EPRVAAILASHYRPEFIVNVKETGKILL----VDYTDLNNLKTTEISAE 206
Query: 345 -QLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRST 403
L GG +H A + + + + R
Sbjct: 207 RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFG 266
Query: 404 GISAVWVARNRFAVLDRNHTILIKNLKNEYLWRM-----GNDRQESALCGWPGTGYPEVA 458
+ A + L + W++ + P + Y V
Sbjct: 267 PVWATSHMGDDSVALIGTDPEGHP----DNAWKILDSFPALGGGSLFIKTHPNSQYLYVD 322
Query: 459 LHFVKDDRTRLTLALECGNIDIA-LEAARVLEDKSVWERLGHAALMQGNHQIVEMCYQR 516
+ ++A+ DI + + A + +G ++V+ + +
Sbjct: 323 ATLNPEAEISGSVAV----FDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNK 377
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 57.2 bits (136), Expect = 3e-09
Identities = 18/278 (6%), Positives = 56/278 (20%), Gaps = 29/278 (10%)
Query: 26 SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGDDYKIKVWNYKQRK 84
++ + I + D N + P G + ++V+ + + +
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 85 CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFH 144
I T+ ++ T+ + + S +
Sbjct: 66 VIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT-VKTGKSPLGLALS 124
Query: 145 PTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYN 204
P + + + + +G + I +
Sbjct: 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISV 184
Query: 205 NVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW--------------- 249
+ + + + ++
Sbjct: 185 IDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP 244
Query: 250 -----------SEVIVSNAEDKSIRLWDMTKRTCLNTF 276
+V V+ + ++ + D T T
Sbjct: 245 DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
Score = 49.9 bits (117), Expect = 6e-07
Identities = 25/252 (9%), Positives = 69/252 (27%), Gaps = 21/252 (8%)
Query: 10 ARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ G P +++ H+ + + D N ++ P + + ++V+
Sbjct: 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVT 91
Query: 69 GGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCI 128
+ V + T+ + ++ + D+T+ + N ++ I
Sbjct: 92 NMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151
Query: 129 CVLTGHNH------------------YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 170
++ M T V ++ I+ +
Sbjct: 152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEG 211
Query: 171 NVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPK-SEVIVSNAEDKSIRL 229
A D + ++ + + + P +V V+ + ++ +
Sbjct: 212 TKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSV 270
Query: 230 WDMTKRTCLNTF 241
D T T
Sbjct: 271 IDTATNTITATM 282
Score = 42.2 bits (97), Expect = 2e-04
Identities = 29/248 (11%), Positives = 66/248 (26%), Gaps = 6/248 (2%)
Query: 65 IFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 124
+++ + I V + K T+ + + ++ + + I + +
Sbjct: 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT 63
Query: 125 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-----ISGLRKKNVAPGMGAD 179
N I + + A + V+ T+ V D ++G K +P A
Sbjct: 64 NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLAL 123
Query: 180 DRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLN 239
K + ++ V + V + +S ++ D + ++
Sbjct: 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSIS 183
Query: 240 TFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPT-LNLFAAG 298
V V A + TK N + + G
Sbjct: 184 VIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG 243
Query: 299 HDAGMVVF 306
D +
Sbjct: 244 PDPAGIAV 251
Score = 30.2 bits (66), Expect = 1.1
Identities = 9/132 (6%), Positives = 28/132 (21%), Gaps = 13/132 (9%)
Query: 18 HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKV 77
+ P ++ +G + + D V P ++ +
Sbjct: 156 VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAY 215
Query: 78 WNYKQRKCIFTLLGHLD--YIRTTFFHHEYPW-----------ILSASDDQTIRIWNWQS 124
+ + I P ++ S T+ + + +
Sbjct: 216 VTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTAT 275
Query: 125 RNCICVLTGHNH 136
+ +
Sbjct: 276 NTITATMAVGKN 287
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 49.4 bits (116), Expect = 1e-06
Identities = 32/292 (10%), Positives = 69/292 (23%), Gaps = 13/292 (4%)
Query: 177 GADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHP-KSEVIVSNAEDKSIRLWDMTKR 235
+ +QI +W +N A + V ++ P K + V + + + +
Sbjct: 10 SPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD 69
Query: 236 TCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLF 295
TF E S +S ++ R E +V
Sbjct: 70 DGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV----- 124
Query: 296 AAGHDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAH 355
+ F D G P H
Sbjct: 125 ---EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH 181
Query: 356 SISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNRF 415
+ + +++ V N++ D + + + + T W A
Sbjct: 182 MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR----WAADIHI 237
Query: 416 AVLDRNHTILIKNLKNEYLWRMGNDRQESALCGWPGTGYPEVALHFVKDDRT 467
R+ + ++ + D + G+ T + +
Sbjct: 238 TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKY 289
Score = 46.0 bits (107), Expect = 2e-05
Identities = 21/353 (5%), Positives = 82/353 (23%), Gaps = 30/353 (8%)
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCI--FTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIR 118
+Q ++++ + +I VWN + ++ ++ + ++ + +
Sbjct: 3 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 62
Query: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGA 178
+ + + P +S +V
Sbjct: 63 AYRIAPDDGALTFAAESA-------LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG 115
Query: 179 DDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCL 238
+ +I + L + + + + + T
Sbjct: 116 LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE 175
Query: 239 NTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAG 298
R ++ E + + ++ + + + + +
Sbjct: 176 GAGPR-------HMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSD 228
Query: 299 HDAGMVVFKFERERPAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSIS 358
+ + ++ + + +
Sbjct: 229 TRWAA------DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFN 282
Query: 359 YNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVA 411
+ + ++ + +++ +Y I E+ E G+ + G +WV
Sbjct: 283 VDHSGKYLIAAGQKSHHIS-----VYEIVGEQGLLHEK--GRYAVGQGPMWVV 328
Score = 37.1 bits (84), Expect = 0.009
Identities = 10/78 (12%), Positives = 23/78 (29%), Gaps = 10/78 (12%)
Query: 213 PKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFW----------SEVIVSNAEDKSI 262
K V +++ E + I +W++ L + + V + +
Sbjct: 2 LKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV 61
Query: 263 RLWDMTKRTCLNTFRREQ 280
+ + TF E
Sbjct: 62 LAYRIAPDDGALTFAAES 79
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 36.2 bits (82), Expect = 0.013
Identities = 22/241 (9%), Positives = 58/241 (24%), Gaps = 39/241 (16%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
+F + +P R ++ + + ++ + G
Sbjct: 56 KFQFGECG-KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQ 114
Query: 62 QQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 121
I V R IF G++ + H E+P + +D Q I I +
Sbjct: 115 HPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 174
Query: 122 WQ-SRNCICVLTGHNHYVM-----------CAQFHPTDDIVVSASLDQTIRVWDISGLRK 169
+ + G + + ++ + + ++ G
Sbjct: 175 NRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLI 234
Query: 170 KNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIRL 229
+ + V V++++ D + +
Sbjct: 235 SALESK-------------------------VKHAQCFDVALMDDGSVVLASK-DYRLYI 268
Query: 230 W 230
+
Sbjct: 269 Y 269
Score = 30.8 bits (68), Expect = 0.66
Identities = 19/233 (8%), Positives = 63/233 (27%), Gaps = 6/233 (2%)
Query: 145 PTDDIVVSASLDQTIRVWDISG--LRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGH 202
+DI+V+ + + I+++D G + + + + + R
Sbjct: 32 AQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP 91
Query: 203 YNNVSCVLFHPKSEVIVSNAEDKSIRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSI 262
+ + + + + R + + + + R N K
Sbjct: 92 THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFG 151
Query: 263 RLWDMTKRTCLNTFRREQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYTVHNNV- 321
+ + +++ AH G + + P N+
Sbjct: 152 CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNG 211
Query: 322 -MYYVKERFLHRLDLTNSKDSVVMQLRGGGRIP-AHSISYNATEHSILVTTRN 372
+ L + ++ L + ++ + S+++ +++
Sbjct: 212 EILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVAL-MDDGSVVLASKD 263
Score = 30.4 bits (67), Expect = 1.1
Identities = 25/264 (9%), Positives = 76/264 (28%), Gaps = 28/264 (10%)
Query: 55 RGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLG--------HLDYIRTTFFHHEYP 106
G+ + Q I V+ ++++I++++ K+ + F +
Sbjct: 26 SGVAVNAQNDIIVADTNNHRIQIFD-KEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDI 84
Query: 107 WILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
+ S I+I+N + + I+V + ++D +G
Sbjct: 85 IVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG 144
Query: 167 LRKKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKS 226
+ + + + + V V N E +
Sbjct: 145 ---------------NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY 189
Query: 227 IRLWDMTKRTCLNTFRREQERFWSEVIVSNAEDKSIRLWDMTKRTCLNTF--RREQERFW 284
+R T +I N + ++ ++ ++ + + + +
Sbjct: 190 LRQIGGEGITN-YPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISALESKVKHAQCF 247
Query: 285 VLVAHPTLNLFAAGHDAGMVVFKF 308
+ ++ A D + ++++
Sbjct: 248 DVALMDDGSVVLASKDYRLYIYRY 271
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 35.3 bits (81), Expect = 0.041
Identities = 24/178 (13%), Positives = 43/178 (24%), Gaps = 43/178 (24%)
Query: 30 NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTL 89
+ V + + + P + + +G + V K
Sbjct: 237 SKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAI--DKLDDLF 294
Query: 90 LGHLDYIRTTFF---------HHEYP-------------WILSASDDQTIRIWNWQSRNC 127
++ T H + + + I+ +N N
Sbjct: 295 EDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNY 354
Query: 128 I----CV--LTGHNHYVMCAQFHPTDDIVVSA---SLDQTIRV----------WDISG 166
I V GHNH + +V S D+ + V DISG
Sbjct: 355 IRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRFLPVGPLHPENDQLIDISG 412
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase,
small subunit C-terminal domain {Escherichia coli
[TaxId: 562]}
Length = 228
Score = 32.9 bits (74), Expect = 0.16
Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 2/104 (1%)
Query: 42 TLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 101
T ++KF E + PV GIC +Q SG K+K ++ + + ++ I
Sbjct: 101 TAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNH 160
Query: 102 HHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHP 145
+ + + + Q +P
Sbjct: 161 GFAVDE--ATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGNP 202
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 32.5 bits (72), Expect = 0.20
Identities = 17/218 (7%), Positives = 58/218 (26%), Gaps = 16/218 (7%)
Query: 26 SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKC 85
++ V++L T + F+ P +G+ ++V+ ++ + + +
Sbjct: 32 EGMYGRVVKLATGSTGTTVLPFNGLYQP-QGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT 90
Query: 86 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ--- 142
+ G ++ +++ +++ + TG N A
Sbjct: 91 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNS 150
Query: 143 ------------FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGADDRQIKLWRMND 190
+ + + + G+ + ++ ++
Sbjct: 151 GNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 210
Query: 191 SKAWEVDIFRGHYNNVSCVLFHPKSEVIVSNAEDKSIR 228
+ N V V V++ + +
Sbjct: 211 GSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 248
Score = 30.6 bits (67), Expect = 0.73
Identities = 8/150 (5%), Positives = 33/150 (22%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIK 76
+ ++ N + T G+ N ++V+ D+ ++
Sbjct: 105 VDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVV 164
Query: 77 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
+ + + ++ + + S + +
Sbjct: 165 KLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLN 224
Query: 137 YVMCAQFHPTDDIVVSASLDQTIRVWDISG 166
+ + V+ + +
Sbjct: 225 TPLAVAVDSDRTVYVADRGNDRVVKLTSLE 254
>g1mhm.1 d.156.1.1 (B:,A:) S-adenosylmethionine decarboxylase
{Potato (Solanum tuberosum) [TaxId: 4113]}
Length = 323
Score = 29.9 bits (67), Expect = 1.3
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 593 EKLKKMMKIA--EIRRDISGQYQAALLLGE----VGERIKILKSCGQTSL 636
+L +++ A I ++S Y + +L E V I+K+CG T L
Sbjct: 29 AQLDEILGPAECTIVDNLSNDYVDSYVLSEXSLFVYSYKIIIKTCGTTKL 78
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ
{Enterobacter aerogenes [TaxId: 548]}
Length = 271
Score = 29.7 bits (65), Expect = 1.6
Identities = 19/157 (12%), Positives = 39/157 (24%), Gaps = 10/157 (6%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+ + P L ++ L+ + L + +R +
Sbjct: 62 VARQILGSLNYPLYLIPGNHDDKALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDS 121
Query: 71 DDYKI--KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW------ 122
+ + L T F H P L + I N
Sbjct: 122 SRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLAL 181
Query: 123 --QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ 157
+ + + GHNH + Q+ + ++ Q
Sbjct: 182 VERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQ 218
>d1jl0a_ d.156.1.1 (A:) S-adenosylmethionine decarboxylase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 325
Score = 29.9 bits (67), Expect = 1.6
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 593 EKLKKMMKIA--EIRRDISGQYQAALLLGE----VGERIKILKSCGQTSL 636
+ ++K I Q A +L E V +R ILK+CG T L
Sbjct: 34 SEWDILLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLL 83
>d1l1ya_ a.102.1.2 (A:) Processive endocellulase CelF (Cel48F)
{Clostridium thermocellum [TaxId: 1515]}
Length = 642
Score = 28.6 bits (64), Expect = 4.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 268 TKRTCLNTFRR-EQERFWVLVAHPTLNLFAAG 298
T+ T +NTF+R EQE W + HP++ F G
Sbjct: 171 TRATFINTFQRGEQESTWETIPHPSIEEFKYG 202
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli
[TaxId: 562]}
Length = 205
Score = 27.6 bits (60), Expect = 5.5
Identities = 15/119 (12%), Positives = 28/119 (23%), Gaps = 9/119 (7%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQRKCIFTLLGHLDY 95
+ + E PV G+C+ Q GG + + L
Sbjct: 62 TEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSALVR 121
Query: 96 IRTTFFHHEYP--------WILSASDDQTIRIWNWQSRNCICVLTGHNHY-VMCAQFHP 145
+ + + I + +C + + QFHP
Sbjct: 122 GIEDALTADGKPLLDVWMSHGDKVTAIPSDFITVASTESCPFAIMANEEKRFYGVQFHP 180
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG
{Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 195
Score = 27.6 bits (60), Expect = 5.9
Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 5/128 (3%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGDDYKIKVWNYKQ 82
I+S + D ++ + K+ P+ G+C +Q + G + + + +
Sbjct: 49 LIISPGPGTPEKREDIGVSLDVIKYLGKRTPILGVCLGHQAIGYAFGAKIRRARKVFHGK 108
Query: 83 RKCIFTLLGHLDYIRTTF-----FHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHY 137
I + + + ++ I N I + +
Sbjct: 109 ISNIILVNNSPLSLYYGIAKEFKATRYHSLVVDEVHRPLIVDAISAEDNEIMAIHHEEYP 168
Query: 138 VMCAQFHP 145
+ QFHP
Sbjct: 169 IYGVQFHP 176
>d1g9ga_ a.102.1.2 (A:) Processive endocellulase CelF (Cel48F)
{Clostridium cellulolyticum [TaxId: 1521]}
Length = 629
Score = 28.2 bits (63), Expect = 6.1
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 268 TKRTCLNTFRR-EQERFWVLVAHPTLNLFAAGHDAGMVVFKFERERPAYT 316
+K + +NTF+R EQE W + P + G G + F ++
Sbjct: 172 SKPSYINTFQRGEQESTWETIPQPCWDEHKFGGQYGFLDL-FTKDTGTPA 220
>d1uuja_ a.221.1.1 (A:) Lissencephaly-1 protein (Lis-1, PAF-AH
alpha) N-terminal domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 76
Score = 25.8 bits (57), Expect = 6.7
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 948 QSIIAYLQQKGYPEVALHFVKD 969
++I YL+ GY E F K+
Sbjct: 12 RAIADYLRSNGYEEAYSVFKKE 33
>d1hg8a_ b.80.1.3 (A:) Polygalacturonase {Fusarium moniliforme
[TaxId: 117187]}
Length = 349
Score = 27.8 bits (61), Expect = 7.5
Identities = 21/160 (13%), Positives = 42/160 (26%), Gaps = 12/160 (7%)
Query: 54 VRGICFHN--QQPIFVSGGDDYKIKVW---NYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 108
+ + N ++G I N K T F I
Sbjct: 117 ITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFD-----I 171
Query: 109 LSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 168
S+ + +C+ V +G N V + + + ++ V + G++
Sbjct: 172 SSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSGGHGLSIGSVGGKSDNV--VDGVQ 229
Query: 169 KKNVAPGMGADDRQIKLWRMNDSKAWEVDIFRGHYNNVSC 208
+ + +IK V N+S
Sbjct: 230 FLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNIST 269
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 288
Score = 27.6 bits (60), Expect = 8.5
Identities = 21/159 (13%), Positives = 43/159 (27%), Gaps = 30/159 (18%)
Query: 17 FHPKRPWILSSL-----HNGVIQLWDYRMNTLLEKFDEHEG-PVRGICFHNQQPIFVSGG 70
F + + ++ N ++ FD+ + PV G C ++ + G
Sbjct: 57 FKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISG 116
Query: 71 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSA------SDDQTIRIWNWQS 124
+ + G L F E L+ ++ + N+
Sbjct: 117 ECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTM 176
Query: 125 R------------------NCICVLTGHNHYVMCAQFHP 145
I + G+ + V Q+HP
Sbjct: 177 NEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHP 215
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.136 0.421
Gapped
Lambda K H
0.267 0.0591 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,781,124
Number of extensions: 180131
Number of successful extensions: 934
Number of sequences better than 10.0: 1
Number of HSP's gapped: 618
Number of HSP's successfully gapped: 146
Length of query: 992
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 898
Effective length of database: 1,116,976
Effective search space: 1003044448
Effective search space used: 1003044448
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.4 bits)