Query psy2686
Match_columns 139
No_of_seqs 106 out of 174
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 22:37:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2686.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2686hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkr_B Coatomer subunit alpha; 100.0 3.1E-68 1.1E-72 449.4 12.8 139 1-139 158-296 (320)
2 3mv2_A Coatomer subunit alpha; 100.0 3.2E-67 1.1E-71 444.0 12.5 136 1-139 170-305 (325)
3 3o48_A Mitochondria fission 1 92.7 0.99 3.4E-05 33.5 9.2 68 14-84 53-121 (134)
4 1nzn_A CGI-135 protein, fissio 90.6 2.3 7.8E-05 31.0 9.1 69 15-84 49-117 (126)
5 1pc2_A Mitochondria fission pr 90.2 0.79 2.7E-05 34.3 6.5 67 17-85 48-115 (152)
6 1y8m_A FIS1; mitochondria, unk 89.1 0.48 1.6E-05 35.7 4.5 68 15-84 53-120 (144)
7 4ayb_P DNA-directed RNA polyme 88.1 0.13 4.6E-06 32.3 0.7 13 119-131 21-33 (48)
8 3gyz_A Chaperone protein IPGC; 85.5 1.5 5.3E-05 31.1 5.3 54 32-86 96-149 (151)
9 1yuz_A Nigerythrin; rubrythrin 84.4 4.2 0.00014 31.4 7.7 70 44-130 123-195 (202)
10 2jvm_A Uncharacterized protein 83.8 0.37 1.3E-05 33.2 1.2 14 119-132 51-64 (80)
11 2jrr_A Uncharacterized protein 80.9 0.48 1.6E-05 31.5 0.9 16 119-134 38-53 (67)
12 2jz8_A Uncharacterized protein 79.3 0.61 2.1E-05 32.6 1.0 15 118-132 45-59 (87)
13 3pwf_A Rubrerythrin; non heme 73.7 17 0.00058 27.2 7.9 72 45-130 88-162 (170)
14 2xev_A YBGF; tetratricopeptide 72.1 13 0.00043 23.4 6.0 39 50-88 85-123 (129)
15 1lko_A Rubrerythrin all-iron(I 71.4 8.9 0.0003 29.1 5.9 75 44-130 102-180 (191)
16 2vgx_A Chaperone SYCD; alterna 71.1 6.7 0.00023 26.8 4.8 40 52-91 100-143 (148)
17 3h0g_L DNA-directed RNA polyme 69.8 2.1 7.3E-05 28.0 1.7 15 118-132 35-49 (63)
18 2odx_A Cytochrome C oxidase po 68.5 1.8 6.2E-05 29.4 1.2 41 96-137 26-72 (80)
19 2v5f_A Prolyl 4-hydroxylase su 68.4 12 0.00041 24.3 5.4 38 49-86 54-91 (104)
20 2elx_A Zinc finger protein 406 68.0 2.4 8.1E-05 21.5 1.4 16 117-132 3-18 (35)
21 1p7a_A BF3, BKLF, kruppel-like 66.9 3.1 0.0001 21.5 1.8 17 116-132 6-22 (37)
22 1l8d_A DNA double-strand break 64.5 1.5 5.1E-05 30.2 0.2 12 123-134 49-60 (112)
23 3bee_A Putative YFRE protein; 61.5 17 0.00059 23.7 5.1 27 48-74 50-76 (93)
24 1twf_L ABC10-alpha, DNA-direct 60.0 3.8 0.00013 27.1 1.5 23 108-132 34-56 (70)
25 2elp_A Zinc finger protein 406 59.3 4.1 0.00014 21.0 1.4 17 117-133 5-21 (37)
26 1srk_A Zinc finger protein ZFP 58.6 4.6 0.00016 20.5 1.5 17 117-133 3-19 (35)
27 2kn9_A Rubredoxin; metalloprot 58.2 3.6 0.00012 28.1 1.2 24 107-130 32-69 (81)
28 2epz_A Zinc finger protein 28 56.7 6.3 0.00022 21.4 1.9 20 113-132 4-23 (46)
29 2elo_A Zinc finger protein 406 56.6 4.1 0.00014 21.0 1.1 16 117-132 5-20 (37)
30 2elz_A Zinc finger protein 224 55.8 6.9 0.00024 21.3 2.0 19 114-132 5-23 (46)
31 1gh9_A 8.3 kDa protein (gene M 55.4 4.2 0.00014 27.0 1.1 18 116-134 16-33 (71)
32 2kdx_A HYPA, hydrogenase/ureas 55.4 4.2 0.00014 28.6 1.2 22 108-132 79-101 (119)
33 2elm_A Zinc finger protein 406 54.8 5.1 0.00017 21.0 1.2 18 116-133 4-21 (37)
34 2els_A Zinc finger protein 406 54.1 5.3 0.00018 20.4 1.2 15 118-132 6-20 (36)
35 2emi_A Zinc finger protein 484 54.0 6.6 0.00023 21.3 1.7 19 114-132 5-23 (46)
36 2c2l_A CHIP, carboxy terminus 53.8 59 0.002 24.4 7.7 39 33-72 65-103 (281)
37 2elt_A Zinc finger protein 406 53.7 5.4 0.00019 20.2 1.2 16 117-132 5-20 (36)
38 4rxn_A Rubredoxin; electron tr 53.4 5.7 0.0002 25.0 1.5 8 123-130 38-45 (54)
39 1s24_A Rubredoxin 2; electron 52.7 4.7 0.00016 27.9 1.1 24 107-130 40-77 (87)
40 2eoh_A Zinc finger protein 28 52.7 7.4 0.00025 21.2 1.8 19 114-132 5-23 (46)
41 2em4_A Zinc finger protein 28 51.7 7.1 0.00024 21.3 1.6 19 114-132 5-23 (46)
42 2ytb_A Zinc finger protein 32; 51.7 7.1 0.00024 20.6 1.6 18 115-132 5-22 (42)
43 2emg_A Zinc finger protein 484 51.4 8.4 0.00029 20.9 1.9 18 115-132 6-23 (46)
44 1yk4_A Rubredoxin, RD; electro 51.4 7.2 0.00025 24.2 1.7 8 123-130 37-44 (52)
45 2epc_A Zinc finger protein 32; 51.2 6.5 0.00022 20.8 1.3 17 116-132 6-22 (42)
46 2ytm_A Zinc finger protein 28 50.7 8.1 0.00028 21.1 1.7 19 114-132 5-23 (46)
47 2yte_A Zinc finger protein 473 50.4 7.7 0.00026 20.4 1.6 17 116-132 5-21 (42)
48 2ytq_A Zinc finger protein 268 50.0 9.8 0.00034 20.6 2.0 18 115-132 6-23 (46)
49 2elr_A Zinc finger protein 406 49.8 7.3 0.00025 19.7 1.4 17 117-133 5-21 (36)
50 2eoj_A Zinc finger protein 268 49.7 7 0.00024 20.9 1.3 18 115-132 6-23 (44)
51 2ene_A Zinc finger protein 347 49.6 8.5 0.00029 20.8 1.7 18 115-132 6-23 (46)
52 2emf_A Zinc finger protein 484 49.5 8.3 0.00029 20.9 1.7 18 115-132 6-23 (46)
53 2elq_A Zinc finger protein 406 49.5 6.5 0.00022 20.1 1.1 17 117-133 5-21 (36)
54 2ept_A Zinc finger protein 32; 49.4 7.6 0.00026 20.5 1.4 17 116-132 5-21 (41)
55 2lcq_A Putative toxin VAPC6; P 49.3 6.1 0.00021 28.8 1.3 47 84-131 108-158 (165)
56 2gmg_A Hypothetical protein PF 49.1 7 0.00024 28.0 1.5 86 39-132 7-95 (105)
57 2elv_A Zinc finger protein 406 48.9 8.1 0.00028 19.7 1.5 16 117-132 5-20 (36)
58 2yu5_A Zinc finger protein 473 48.8 9 0.00031 20.5 1.7 19 115-133 6-24 (44)
59 2vkj_A TM1634; membrane protei 48.8 40 0.0014 23.9 5.4 63 26-88 31-100 (106)
60 2v3b_B Rubredoxin 2, rubredoxi 48.7 7.3 0.00025 24.5 1.4 8 123-130 38-45 (55)
61 3a43_A HYPD, hydrogenase nicke 48.5 4.5 0.00016 29.5 0.5 56 74-131 41-117 (139)
62 2emb_A Zinc finger protein 473 48.4 9.1 0.00031 20.5 1.7 18 115-132 6-23 (44)
63 2ysp_A Zinc finger protein 224 48.1 7.5 0.00026 21.1 1.3 18 115-132 6-23 (46)
64 1elr_A TPR2A-domain of HOP; HO 47.6 45 0.0015 20.2 7.1 41 48-88 86-126 (131)
65 2el5_A Zinc finger protein 268 47.6 8.3 0.00028 20.4 1.4 17 116-132 5-21 (42)
66 2em2_A Zinc finger protein 28 47.6 9.7 0.00033 20.7 1.7 18 115-132 6-23 (46)
67 2eos_A B-cell lymphoma 6 prote 47.5 9.4 0.00032 20.2 1.6 18 116-133 6-23 (42)
68 2enf_A Zinc finger protein 347 47.4 9.6 0.00033 20.6 1.7 18 115-132 6-23 (46)
69 3iuf_A Zinc finger protein UBI 47.3 7.6 0.00026 21.8 1.3 16 117-132 3-18 (48)
70 2eou_A Zinc finger protein 473 47.0 9.9 0.00034 20.4 1.7 18 115-132 6-23 (44)
71 1e8j_A Rubredoxin; iron-sulfur 46.5 9.6 0.00033 23.6 1.7 8 123-130 38-45 (52)
72 2eq4_A Zinc finger protein 224 46.4 11 0.00037 20.3 1.8 17 116-132 7-23 (46)
73 2ep1_A Zinc finger protein 484 46.3 11 0.00037 20.3 1.8 18 115-132 6-23 (46)
74 2epx_A Zinc finger protein 28 46.3 12 0.00041 20.1 2.0 17 116-132 7-23 (47)
75 2kvh_A Zinc finger and BTB dom 46.2 7.5 0.00025 18.4 1.0 12 121-132 3-14 (27)
76 2enh_A Zinc finger protein 28 46.1 12 0.00039 20.3 1.9 19 115-133 6-24 (46)
77 2ely_A Zinc finger protein 224 45.9 12 0.00042 20.2 2.0 19 115-133 6-24 (46)
78 4ga2_A E3 SUMO-protein ligase 45.8 40 0.0014 22.7 5.1 45 28-73 19-63 (150)
79 6rxn_A Rubredoxin; electron tr 45.7 6.8 0.00023 23.9 0.9 23 107-130 9-39 (46)
80 2eof_A Zinc finger protein 268 45.4 9.2 0.00032 20.3 1.4 19 115-133 6-24 (44)
81 2emj_A Zinc finger protein 28 45.4 11 0.00037 20.5 1.7 18 115-132 6-23 (46)
82 4gco_A Protein STI-1; structur 45.2 51 0.0017 21.6 5.4 23 51-73 57-79 (126)
83 2e2e_A Formate-dependent nitri 45.0 44 0.0015 22.3 5.2 24 50-73 124-147 (177)
84 2eq1_A Zinc finger protein 347 44.9 11 0.00038 20.3 1.7 18 115-132 6-23 (46)
85 2em7_A Zinc finger protein 224 44.9 12 0.00039 20.3 1.8 18 115-132 6-23 (46)
86 3gyz_A Chaperone protein IPGC; 44.8 46 0.0016 23.2 5.4 41 33-74 29-69 (151)
87 2xcb_A PCRH, regulatory protei 44.8 50 0.0017 21.6 5.4 39 34-73 12-50 (142)
88 2en7_A Zinc finger protein 268 44.7 11 0.00039 19.9 1.7 17 116-132 7-23 (44)
89 2enc_A Zinc finger protein 224 44.6 11 0.00039 20.3 1.7 18 115-132 6-23 (46)
90 1v54_F VI, cytochrome C oxidas 44.5 6.7 0.00023 27.5 0.8 17 115-132 74-90 (98)
91 2en2_A B-cell lymphoma 6 prote 44.5 10 0.00035 20.0 1.5 17 116-132 6-22 (42)
92 2emz_A ZFP-95, zinc finger pro 44.3 13 0.00043 20.2 1.9 18 115-132 6-23 (46)
93 2yrk_A Zinc finger homeobox pr 43.9 9.7 0.00033 24.4 1.4 17 119-135 11-27 (55)
94 2epv_A Zinc finger protein 268 43.8 12 0.00042 20.1 1.7 18 115-132 6-23 (44)
95 2eop_A Zinc finger protein 268 43.8 13 0.00046 19.9 1.9 17 116-132 7-23 (46)
96 2eov_A Zinc finger protein 484 43.7 14 0.00047 19.8 2.0 16 117-132 8-23 (46)
97 2eon_A ZFP-95, zinc finger pro 43.4 14 0.00047 20.1 2.0 17 116-132 7-23 (46)
98 2em8_A Zinc finger protein 224 43.3 12 0.00041 20.2 1.7 18 115-132 6-23 (46)
99 2yti_A Zinc finger protein 347 43.2 14 0.00046 20.0 1.9 17 116-132 7-23 (46)
100 2yts_A Zinc finger protein 484 43.1 10 0.00036 20.4 1.4 18 115-132 6-23 (46)
101 2eml_A Zinc finger protein 28 43.1 12 0.00042 20.1 1.7 17 116-132 7-23 (46)
102 3na7_A HP0958; flagellar bioge 42.9 3.8 0.00013 32.3 -0.8 52 73-132 174-233 (256)
103 2eoy_A Zinc finger protein 473 42.9 12 0.00043 20.2 1.7 18 116-133 7-24 (46)
104 2en3_A ZFP-95, zinc finger pro 42.6 11 0.00038 20.3 1.4 19 115-133 6-24 (46)
105 2ytr_A Zinc finger protein 347 42.5 13 0.00045 19.9 1.8 17 116-132 7-23 (46)
106 2yrj_A Zinc finger protein 473 42.5 13 0.00045 19.9 1.7 17 116-132 7-23 (46)
107 2eow_A Zinc finger protein 347 42.4 11 0.00037 20.3 1.4 17 116-132 7-23 (46)
108 2em6_A Zinc finger protein 224 42.2 15 0.00052 19.8 2.0 17 116-132 7-23 (46)
109 2eor_A Zinc finger protein 224 42.2 13 0.00044 20.0 1.7 18 115-132 6-23 (46)
110 3uk3_C Zinc finger protein 217 42.1 8.5 0.00029 21.6 0.9 12 120-131 3-14 (57)
111 2em9_A Zinc finger protein 224 42.0 13 0.00046 19.9 1.7 17 116-132 7-23 (46)
112 1njq_A Superman protein; zinc- 41.7 9.7 0.00033 19.9 1.1 15 118-132 3-17 (39)
113 2ytj_A Zinc finger protein 484 41.5 13 0.00046 20.0 1.7 18 115-132 6-23 (46)
114 2yth_A Zinc finger protein 224 41.5 13 0.00045 20.1 1.7 17 116-132 7-23 (46)
115 2ytp_A Zinc finger protein 484 41.4 14 0.00048 20.0 1.7 18 115-132 6-23 (46)
116 3qky_A Outer membrane assembly 41.2 67 0.0023 23.0 5.9 35 54-88 208-242 (261)
117 2ytn_A Zinc finger protein 347 41.1 16 0.00054 19.6 2.0 17 116-132 7-23 (46)
118 2emh_A Zinc finger protein 484 41.1 14 0.00047 19.9 1.7 17 116-132 7-23 (46)
119 2m0d_A Zinc finger and BTB dom 41.0 9.9 0.00034 17.9 1.0 12 121-132 3-14 (30)
120 2xcb_A PCRH, regulatory protei 41.0 27 0.00092 23.0 3.5 22 52-73 63-84 (142)
121 2ytf_A Zinc finger protein 268 41.0 14 0.00049 19.8 1.7 17 116-132 7-23 (46)
122 2eoz_A Zinc finger protein 473 40.9 11 0.00039 20.4 1.3 17 116-132 7-23 (46)
123 2ytg_A ZFP-95, zinc finger pro 40.8 14 0.00047 19.9 1.6 17 116-132 7-23 (46)
124 2emk_A Zinc finger protein 28 40.8 16 0.00054 19.7 1.9 17 116-132 7-23 (46)
125 2yto_A Zinc finger protein 484 40.5 12 0.00041 20.2 1.4 17 116-132 7-23 (46)
126 2em0_A Zinc finger protein 224 40.4 16 0.00054 19.7 1.9 17 116-132 7-23 (46)
127 2kvf_A Zinc finger and BTB dom 40.4 11 0.00036 17.8 1.0 13 121-133 3-15 (28)
128 2en9_A Zinc finger protein 28 40.3 15 0.00053 19.8 1.8 18 115-132 6-23 (46)
129 2el4_A Zinc finger protein 268 40.2 15 0.0005 19.7 1.7 17 116-132 7-23 (46)
130 2eoo_A ZFP-95, zinc finger pro 40.2 15 0.00052 19.8 1.8 18 115-132 6-23 (46)
131 2yso_A ZFP-95, zinc finger pro 40.1 15 0.0005 19.8 1.7 18 115-132 6-23 (46)
132 2ep3_A Zinc finger protein 484 40.0 15 0.00052 19.7 1.8 17 116-132 7-23 (46)
133 2eq3_A Zinc finger protein 347 40.0 11 0.00036 20.4 1.1 17 116-132 7-23 (46)
134 1dx8_A Rubredoxin; electron tr 39.7 12 0.00041 24.6 1.4 8 123-130 42-49 (70)
135 2epw_A Zinc finger protein 268 39.7 15 0.00053 19.6 1.7 18 116-133 7-24 (46)
136 4gcn_A Protein STI-1; structur 39.6 56 0.0019 21.3 4.9 25 49-73 16-40 (127)
137 2em3_A Zinc finger protein 28 39.2 16 0.00053 19.7 1.7 18 116-133 7-24 (46)
138 2ytt_A Zinc finger protein 473 39.2 14 0.00049 19.9 1.6 17 116-132 7-23 (46)
139 1ard_A Yeast transcription fac 39.1 11 0.00036 17.8 0.9 12 122-133 3-14 (29)
140 1na0_A Designed protein CTPR3; 38.9 61 0.0021 19.3 4.7 24 50-73 52-75 (125)
141 2en8_A Zinc finger protein 224 38.9 16 0.00053 19.6 1.7 17 116-132 7-23 (46)
142 2m0e_A Zinc finger and BTB dom 38.8 10 0.00035 17.7 0.8 12 122-133 3-14 (29)
143 2eq2_A Zinc finger protein 347 38.8 14 0.00047 19.9 1.4 17 116-132 7-23 (46)
144 3ma5_A Tetratricopeptide repea 38.7 16 0.00056 22.9 2.0 24 50-73 50-73 (100)
145 2epu_A Zinc finger protein 32; 38.4 13 0.00044 20.0 1.3 17 116-132 7-23 (45)
146 2ema_A Zinc finger protein 347 38.3 16 0.00054 19.6 1.7 17 116-132 7-23 (46)
147 2ep2_A Zinc finger protein 484 38.2 17 0.00057 19.5 1.8 17 116-132 7-23 (46)
148 2en6_A Zinc finger protein 268 38.2 13 0.00043 20.1 1.2 18 115-132 6-23 (46)
149 2eox_A Zinc finger protein 473 38.2 12 0.00039 20.0 1.0 18 116-133 7-24 (44)
150 2el6_A Zinc finger protein 268 38.2 16 0.00056 19.7 1.7 17 116-132 7-23 (46)
151 3u4t_A TPR repeat-containing p 38.1 71 0.0024 22.4 5.6 34 44-77 224-257 (272)
152 1znf_A 31ST zinc finger from X 38.1 12 0.0004 17.4 1.0 11 122-132 2-12 (27)
153 2kvg_A Zinc finger and BTB dom 38.0 9.6 0.00033 18.2 0.6 11 122-132 4-14 (27)
154 2eme_A Zinc finger protein 473 37.8 17 0.00058 19.4 1.7 17 116-132 7-23 (46)
155 2eoq_A Zinc finger protein 224 37.8 15 0.00051 19.8 1.5 17 116-132 7-23 (46)
156 2ytk_A Zinc finger protein 347 37.6 17 0.00057 19.6 1.7 17 116-132 7-23 (46)
157 1vd4_A Transcription initiatio 36.9 15 0.00051 21.7 1.5 28 106-133 18-51 (62)
158 1yui_A GAGA-factor; complex (D 36.8 12 0.00041 21.2 1.0 18 115-132 18-35 (54)
159 2emx_A Zinc finger protein 268 36.6 15 0.00051 19.5 1.4 16 117-132 6-21 (44)
160 2yu8_A Zinc finger protein 347 36.6 16 0.00054 19.7 1.4 18 116-133 7-24 (46)
161 2emy_A Zinc finger protein 268 36.4 15 0.00051 19.8 1.3 17 116-132 7-23 (46)
162 2eq0_A Zinc finger protein 347 36.1 15 0.00053 19.7 1.4 17 116-132 7-23 (46)
163 4ady_A RPN2, 26S proteasome re 36.0 19 0.00064 34.3 2.6 77 1-87 165-256 (963)
164 2em5_A ZFP-95, zinc finger pro 35.7 19 0.00064 19.4 1.7 16 117-132 8-23 (46)
165 2ytd_A Zinc finger protein 473 35.7 19 0.00067 19.3 1.7 17 116-132 7-23 (46)
166 2m0f_A Zinc finger and BTB dom 35.4 11 0.00038 17.6 0.6 11 122-132 3-13 (29)
167 1na3_A Designed protein CTPR2; 35.3 65 0.0022 18.5 4.9 22 52-73 54-75 (91)
168 1klr_A Zinc finger Y-chromosom 35.2 12 0.00042 17.5 0.8 12 122-133 3-14 (30)
169 2yrm_A B-cell lymphoma 6 prote 35.2 19 0.00064 19.2 1.6 16 117-132 6-21 (43)
170 2eom_A ZFP-95, zinc finger pro 35.1 18 0.00062 19.5 1.5 17 116-132 7-23 (46)
171 2xev_A YBGF; tetratricopeptide 34.7 81 0.0028 19.4 5.1 26 49-74 47-72 (129)
172 2emp_A Zinc finger protein 347 34.6 21 0.00071 19.1 1.8 17 116-132 7-23 (46)
173 2y69_F Cytochrome C oxidase su 34.2 12 0.00041 27.6 0.8 17 115-132 105-121 (129)
174 2emm_A ZFP-95, zinc finger pro 34.2 21 0.00074 19.0 1.8 16 117-132 8-23 (46)
175 1rik_A E6APC1 peptide; E6-bind 34.1 12 0.00043 17.6 0.7 12 122-133 3-14 (29)
176 2en1_A Zinc finger protein 224 33.7 18 0.00061 19.4 1.4 17 116-132 7-23 (46)
177 2lvu_A Zinc finger and BTB dom 39.3 9.1 0.00031 17.9 0.0 12 122-133 3-14 (26)
178 2eps_A POZ-, at HOOK-, and zin 32.8 25 0.00084 19.9 1.9 19 115-133 35-53 (54)
179 2dba_A Smooth muscle cell asso 32.7 91 0.0031 19.4 6.7 23 51-73 75-97 (148)
180 2drp_A Protein (tramtrack DNA- 32.5 17 0.00058 21.0 1.2 16 117-132 36-51 (66)
181 1paa_A Yeast transcription fac 32.2 16 0.00054 17.3 0.9 11 122-132 3-13 (30)
182 3plt_A Sphingolipid long chain 31.6 64 0.0022 25.8 4.8 49 42-90 160-224 (234)
183 2eoe_A Zinc finger protein 347 31.4 20 0.0007 19.1 1.3 17 116-132 7-23 (46)
184 2yhc_A BAMD, UPF0169 lipoprote 31.3 84 0.0029 22.2 5.1 29 48-76 48-76 (225)
185 4gcn_A Protein STI-1; structur 30.9 87 0.003 20.3 4.7 31 50-80 92-122 (127)
186 1bbo_A Human enhancer-binding 30.9 18 0.00061 20.2 1.1 17 116-132 24-40 (57)
187 2lvr_A Zinc finger and BTB dom 36.9 11 0.00036 17.9 0.0 11 122-132 4-14 (30)
188 2yhc_A BAMD, UPF0169 lipoprote 30.6 88 0.003 22.1 5.1 47 50-96 156-219 (225)
189 1x6e_A Zinc finger protein 24; 30.4 25 0.00086 20.8 1.8 26 107-132 19-53 (72)
190 1vzy_A 33 kDa chaperonin; chap 30.3 11 0.00039 30.6 0.1 16 117-132 261-276 (291)
191 2ep0_A Zinc finger protein 28 30.1 27 0.00092 18.6 1.7 17 116-132 7-23 (46)
192 1i7f_A Heat shock protein 33; 29.5 11 0.00039 30.6 0.0 16 117-132 256-271 (292)
193 1fv5_A First zinc finger of U- 29.4 17 0.00058 20.2 0.7 16 117-132 4-19 (36)
194 2lvt_A Zinc finger and BTB dom 35.5 11 0.00039 17.9 0.0 11 122-132 3-13 (29)
195 2lce_A B-cell lymphoma 6 prote 28.9 26 0.00087 20.8 1.6 26 107-132 22-56 (74)
196 1f2i_G Fusion of N-terminal 17 28.6 21 0.0007 21.1 1.1 26 107-132 26-60 (73)
197 2ds5_A CLPX, ATP-dependent CLP 28.6 21 0.00073 22.1 1.2 11 121-131 11-21 (51)
198 2kfq_A FP1; protein, de novo p 27.8 18 0.00061 18.0 0.6 11 122-132 3-13 (32)
199 2adr_A ADR1; transcription reg 27.8 21 0.00071 20.2 1.0 16 117-132 26-41 (60)
200 1hgv_A PH75 inovirus major coa 27.6 48 0.0016 20.1 2.6 21 40-69 25-45 (46)
201 3ieg_A DNAJ homolog subfamily 27.4 1.7E+02 0.0059 20.9 7.0 23 50-72 281-303 (359)
202 2ond_A Cleavage stimulation fa 27.2 31 0.001 26.0 2.1 19 52-70 214-232 (308)
203 2ct1_A Transcriptional repress 27.0 30 0.001 20.7 1.7 13 120-132 44-56 (77)
204 1vq8_Z 50S ribosomal protein L 26.5 19 0.00064 24.4 0.7 11 121-131 27-37 (83)
205 3mhs_C SAGA-associated factor 26.5 84 0.0029 22.1 4.1 39 91-131 42-80 (99)
206 2eod_A TNF receptor-associated 26.4 24 0.00082 20.7 1.1 12 120-131 9-20 (66)
207 2vgx_A Chaperone SYCD; alterna 26.4 1.4E+02 0.0049 19.8 5.4 22 52-73 32-53 (148)
208 1vq0_A 33 kDa chaperonin; TM13 26.1 18 0.00062 29.7 0.7 15 117-132 269-283 (302)
209 4gco_A Protein STI-1; structur 26.0 1.4E+02 0.0047 19.4 5.1 34 41-74 13-46 (126)
210 2epq_A POZ-, at HOOK-, and zin 25.9 21 0.00072 19.1 0.7 16 117-132 6-21 (45)
211 1lv3_A Hypothetical protein YA 25.3 21 0.00072 23.5 0.7 14 119-132 7-20 (68)
212 1rim_A E6APC2 peptide; E6-bind 25.2 24 0.0008 17.8 0.8 11 122-132 3-13 (33)
213 2gw1_A Mitochondrial precursor 24.8 2E+02 0.0067 22.1 6.4 38 49-86 457-494 (514)
214 1ovx_A ATP-dependent CLP prote 24.5 23 0.00077 23.3 0.8 11 121-131 18-28 (67)
215 3qky_A Outer membrane assembly 24.0 1.6E+02 0.0053 21.0 5.4 40 49-88 60-99 (261)
216 3upv_A Heat shock protein STI1 24.0 1.4E+02 0.0046 18.6 4.9 24 51-74 48-71 (126)
217 1m0d_A Endonuclease, endodeoxy 23.7 64 0.0022 24.0 3.2 35 79-122 63-97 (138)
218 2d9k_A FLN29 gene product; zin 23.6 29 0.001 21.6 1.2 14 118-131 14-27 (75)
219 2dlk_A Novel protein; ZF-C2H2 23.5 29 0.001 20.6 1.1 15 117-131 64-78 (79)
220 2xpi_A Anaphase-promoting comp 23.5 1.6E+02 0.0055 23.4 5.8 35 40-74 83-117 (597)
221 2xpi_A Anaphase-promoting comp 22.6 2.6E+02 0.009 22.2 7.0 38 36-73 511-548 (597)
222 2kc7_A BFR218_protein; tetratr 22.5 1.2E+02 0.0042 17.9 4.0 40 35-75 29-69 (99)
223 2ghf_A ZHX1, zinc fingers and 22.5 31 0.0011 23.2 1.2 16 117-132 14-29 (102)
224 1x5w_A Zinc finger protein 64, 22.2 34 0.0012 20.0 1.2 13 119-131 7-19 (70)
225 3r4i_A Citrate lyase; TIM beta 22.1 75 0.0026 26.0 3.7 27 71-97 267-293 (339)
226 3q49_B STIP1 homology and U bo 22.0 1.4E+02 0.005 18.4 4.4 24 50-73 52-75 (137)
227 2jvx_A NF-kappa-B essential mo 21.9 31 0.0011 18.9 0.9 11 120-130 2-12 (28)
228 2ctu_A Zinc finger protein 483 21.4 39 0.0013 19.4 1.4 18 116-133 13-30 (73)
229 3j21_i 50S ribosomal protein L 21.4 27 0.00094 23.8 0.7 10 121-130 35-44 (83)
230 3sz7_A HSC70 cochaperone (SGT) 21.2 1.7E+02 0.0058 19.2 4.9 41 34-75 39-79 (164)
231 2ho1_A Type 4 fimbrial biogene 21.2 1.5E+02 0.0053 20.4 4.8 28 46-73 180-207 (252)
232 2epr_A POZ-, at HOOK-, and zin 21.1 32 0.0011 18.7 0.9 16 117-132 8-23 (48)
233 2cot_A Zinc finger protein 435 21.1 42 0.0014 20.0 1.5 16 117-132 14-29 (77)
234 2gqj_A Zinc finger protein KIA 20.9 39 0.0013 21.5 1.4 16 117-132 20-35 (98)
235 2vq2_A PILW, putative fimbrial 20.9 1.5E+02 0.0051 19.7 4.5 29 44-72 150-178 (225)
236 1zu2_A Mitochondrial import re 20.7 2E+02 0.0069 20.9 5.5 31 55-85 105-135 (158)
237 1elw_A TPR1-domain of HOP; HOP 20.7 1.4E+02 0.0047 17.4 6.3 24 50-73 47-70 (118)
238 3k9i_A BH0479 protein; putativ 20.7 1.6E+02 0.0055 18.2 5.6 23 51-73 37-59 (117)
239 3rkv_A Putative peptidylprolyl 20.4 1.9E+02 0.0065 18.9 6.3 39 36-75 93-131 (162)
240 2q7f_A YRRB protein; TPR, prot 20.3 83 0.0029 21.5 3.1 25 49-73 167-191 (243)
241 1va1_A Transcription factor SP 20.2 43 0.0015 17.0 1.2 16 117-132 4-21 (37)
No 1
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=100.00 E-value=3.1e-68 Score=449.38 Aligned_cols=139 Identities=61% Similarity=1.028 Sum_probs=136.4
Q ss_pred CccchhhhhhhhccCCchhhhHHHHHHHHhhhcCCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHH
Q psy2686 1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQA 80 (139)
Q Consensus 1 ~gl~iEl~Rr~l~~~~~~~~kR~lELaAYFT~c~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qA 80 (139)
+||+||++||++++++++|+||+||||||||||+|||.|++||||+||+++||+|||+||++|||||||++|++++++||
T Consensus 158 lal~iEl~Rr~l~~~~~~~~kR~lELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~~~qA 237 (320)
T 3mkr_B 158 VGLSMETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEVAQQT 237 (320)
T ss_dssp HHHHHHHHHTTSCCCSHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHHHhcccCCchhHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 58999999999988778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeecCCCCCCeeeeccccccccCCCccccccCCCccccCCCCCCC
Q psy2686 81 RKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRESEACVYCGASYLPKYKGEL 139 (139)
Q Consensus 81 rkil~~~e~~~~da~~i~yD~~~~F~iC~~s~tPIy~g~~~v~Cp~cga~y~p~~kG~l 139 (139)
|||+++||++|+|+|+||||++|||+||++||||||+|+|+|+||||||+|+|+|||+|
T Consensus 238 rkil~~ce~~~~da~eidyD~~~~f~iCa~s~tPIY~g~~~v~Cp~cgA~y~~~~kG~l 296 (320)
T 3mkr_B 238 RKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI 296 (320)
T ss_dssp HHHHHHHHHSCCBSSCCSCCTTSCCCBBTTTCCBCCTTSCCEECTTTCCEECGGGTTSB
T ss_pred HHHHHHHhcCCCCccccCCCCCCccceecCCCccccCCCCCccCCCCCCeechhhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999986
No 2
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=100.00 E-value=3.2e-67 Score=443.97 Aligned_cols=136 Identities=36% Similarity=0.557 Sum_probs=133.4
Q ss_pred CccchhhhhhhhccCCchhhhHHHHHHHHhhhcCCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHH
Q psy2686 1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQA 80 (139)
Q Consensus 1 ~gl~iEl~Rr~l~~~~~~~~kR~lELaAYFT~c~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qA 80 (139)
+||+||++||++++++ ++|+||||||||||+|||+|++||||+||+++||+|||+||++||||||+++|++++++||
T Consensus 170 lal~iEl~Rr~l~~~~---~kR~lELAAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~qA 246 (325)
T 3mv2_A 170 LGLSIELERRSLKEGN---TVRMLELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQA 246 (325)
T ss_dssp HHHHHHHHHHTCCTTC---HHHHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHHHH
T ss_pred HHHHHHHHHHhcCccc---HHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 5899999999998866 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeecCCCCCCeeeeccccccccCCCccccccCCCccccCCCCCCC
Q psy2686 81 RKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRESEACVYCGASYLPKYKGEL 139 (139)
Q Consensus 81 rkil~~~e~~~~da~~i~yD~~~~F~iC~~s~tPIy~g~~~v~Cp~cga~y~p~~kG~l 139 (139)
|||+++||++|+|+|+||||++|||+||++||||||+|+|+|+||||||+|+|+|||+|
T Consensus 247 rkil~~ce~~~~Da~eidyD~~~~F~iCa~s~tPIY~g~~~v~Cp~cgA~y~~~~kG~l 305 (325)
T 3mv2_A 247 RKIKNKADSMASDAIPIDFDPYAKFDICAATYKPIYEDTPSVSDPLTGSKYVITEKDKI 305 (325)
T ss_dssp HHHHHHHHTSCCCSSCCSCCTTSCEEECTTTCCEEESSSCEEECTTTCCEEEGGGTTSB
T ss_pred HHHHHHHhcCCCCccccCCCCCCCceeecCCcccccCCCCCccCCCCCCeechhhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999986
No 3
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=92.67 E-value=0.99 Score=33.54 Aligned_cols=68 Identities=10% Similarity=0.146 Sum_probs=47.6
Q ss_pred cCCchhhhHHHHH-HHHhhhcCCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q psy2686 14 KSNESSQVRICEL-AAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLL 84 (139)
Q Consensus 14 ~~~~~~~kR~lEL-aAYFT~c~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil 84 (139)
..+.+|++|.++| ...|..- |.++.=.|=-----.||.|||..|-.++.+||+..|....+..=++.+
T Consensus 53 S~~~~d~~~GI~LLe~l~~~~---~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 53 STDVNDERLGVKILTDIYKEA---ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp SSCHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcC---cchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 3455678888887 5566543 545444443333446999999999999999999999877665544444
No 4
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=90.58 E-value=2.3 Score=30.97 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=48.0
Q ss_pred CCchhhhHHHHHHHHhhhcCCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q psy2686 15 SNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLL 84 (139)
Q Consensus 15 ~~~~~~kR~lELaAYFT~c~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil 84 (139)
.++.|++|.++|-----+-+ .|.++.-.|-.-=-..||.|||..|-.++.+||+..|....+..=++.+
T Consensus 49 ~~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 49 RYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp SSHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34566777777655333321 2556666666666667999999999999999999999876655544443
No 5
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=90.22 E-value=0.79 Score=34.34 Aligned_cols=67 Identities=15% Similarity=0.209 Sum_probs=46.4
Q ss_pred chhhhHHHHHHHHhhhcCCch-hhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q psy2686 17 ESSQVRICELAAYFTHSKLQP-VHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLA 85 (139)
Q Consensus 17 ~~~~kR~lELaAYFT~c~Lqp-~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~ 85 (139)
+.+++|.++|-----.-+ .| .|+---...|+.- ||.|||..|-.+.+++|++.|....+...++.+.
T Consensus 48 ~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~-~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 48 NDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGN-YRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHH-HHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHH-HHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 344555554432222211 24 4566666777777 9999999999999999999998888777776664
No 6
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=89.12 E-value=0.48 Score=35.67 Aligned_cols=68 Identities=10% Similarity=0.096 Sum_probs=43.9
Q ss_pred CCchhhhHHHHHHHHhhhcCCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q psy2686 15 SNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLL 84 (139)
Q Consensus 15 ~~~~~~kR~lELaAYFT~c~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil 84 (139)
.+.+|++|.++|-----+. .|.++.-.|------.||.|||..|-.++.+||+..|....+..=++.+
T Consensus 53 ~~~~di~~GI~LLe~l~~~--~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 53 TDVNDERLGVKILTDIYKE--AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp SSHHHHHHHHHHHHHHHHH--CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhc--CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3456677777765433331 2333333333333345999999999999999999999876655544444
No 7
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=88.14 E-value=0.13 Score=32.32 Aligned_cols=13 Identities=31% Similarity=0.718 Sum_probs=10.9
Q ss_pred CccccccCCCccc
Q psy2686 119 RESEACVYCGASY 131 (139)
Q Consensus 119 ~~~v~Cp~cga~y 131 (139)
-|.|+|||||-+.
T Consensus 21 lP~IrCpyCGyri 33 (48)
T 4ayb_P 21 LPGVRCPYCGYKI 33 (48)
T ss_dssp CSSSCCTTTCCSC
T ss_pred CCCcccCccCcEE
Confidence 5899999999654
No 8
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=85.48 E-value=1.5 Score=31.12 Aligned_cols=54 Identities=11% Similarity=0.054 Sum_probs=40.3
Q ss_pred hcCCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q psy2686 32 HSKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAI 86 (139)
Q Consensus 32 ~c~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~ 86 (139)
-..+.|.+-..-...|+ ..++.|++..|...-++.|++.|+++..++|++.+..
T Consensus 96 al~l~P~~~~~~~~lg~-~~~~lg~~~eA~~~~~~al~l~~~~~~~~~A~~ll~~ 149 (151)
T 3gyz_A 96 AFALGKNDYTPVFHTGQ-CQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDA 149 (151)
T ss_dssp HHHHSSSCCHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred HHhhCCCCcHHHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 33455555544444444 3468899999999999999999999999999988764
No 9
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=84.44 E-value=4.2 Score=31.39 Aligned_cols=70 Identities=17% Similarity=0.171 Sum_probs=41.7
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCCCCceeecCCCCCCeeee---ccccccccCCCc
Q psy2686 44 LRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQIC---ARSYTPIYHGRE 120 (139)
Q Consensus 44 Lr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~~e~~~~da~~i~yD~~~~F~iC---~~s~tPIy~g~~ 120 (139)
+...+.+|-..|++.++..|-. +++- -..-.+..++++..-+.. |+ ..+-+| +.. |.|.+
T Consensus 123 y~~~a~~A~eEgd~~~a~~f~~-i~~~--E~~H~~~~~~ll~~l~~~---------~~-~~~~~C~~CG~i----~~g~~ 185 (202)
T 1yuz_A 123 YPAFIRKAQEEGNSKAVHVFTR-AKLA--ESVHAERYLAAYNDIDAP---------DD-DKFHLCPICGYI----HKGED 185 (202)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH-HHHH--HHHHHHHHHHHHHTTTCC---------CS-CCEEECSSSCCE----EESSC
T ss_pred HHHHHHHHHHCCCHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHhcC---------CC-CcEEEECCCCCE----EcCcC
Confidence 5566777777787777766644 3321 022234466777666554 11 124444 444 44677
Q ss_pred cccccCCCcc
Q psy2686 121 SEACVYCGAS 130 (139)
Q Consensus 121 ~v~Cp~cga~ 130 (139)
...||.||+.
T Consensus 186 p~~CP~C~~~ 195 (202)
T 1yuz_A 186 FEKCPICFRP 195 (202)
T ss_dssp CSBCTTTCCB
T ss_pred CCCCCCCCCC
Confidence 7999999985
No 10
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=83.77 E-value=0.37 Score=33.17 Aligned_cols=14 Identities=29% Similarity=0.755 Sum_probs=12.1
Q ss_pred CccccccCCCcccc
Q psy2686 119 RESEACVYCGASYL 132 (139)
Q Consensus 119 ~~~v~Cp~cga~y~ 132 (139)
...+.|||||..|.
T Consensus 51 ~g~~~CpYCg~~f~ 64 (80)
T 2jvm_A 51 TGFVECGYCDRRYI 64 (80)
T ss_dssp TCEEECSSSSCEEE
T ss_pred CCeEECCCCCCEEE
Confidence 56799999999985
No 11
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=80.90 E-value=0.48 Score=31.54 Aligned_cols=16 Identities=31% Similarity=0.708 Sum_probs=13.1
Q ss_pred CccccccCCCccccCC
Q psy2686 119 RESEACVYCGASYLPK 134 (139)
Q Consensus 119 ~~~v~Cp~cga~y~p~ 134 (139)
...+.|||||..|.-+
T Consensus 38 ~g~~~CpYCg~~f~l~ 53 (67)
T 2jrr_A 38 TGWVECPYCDCKYVLK 53 (67)
T ss_dssp TSEEEETTTTEEEEET
T ss_pred CCeEECCCCCCEEEEC
Confidence 5679999999998643
No 12
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=79.28 E-value=0.61 Score=32.56 Aligned_cols=15 Identities=27% Similarity=0.822 Sum_probs=12.7
Q ss_pred CCccccccCCCcccc
Q psy2686 118 GRESEACVYCGASYL 132 (139)
Q Consensus 118 g~~~v~Cp~cga~y~ 132 (139)
....+.|||||..|.
T Consensus 45 ~~g~~~CpYCg~~y~ 59 (87)
T 2jz8_A 45 STDEKICPYCSTLYR 59 (87)
T ss_dssp TCCEECCTTTCCEEE
T ss_pred CCCeEECCCCCCEeE
Confidence 357789999999996
No 13
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=73.75 E-value=17 Score=27.23 Aligned_cols=72 Identities=18% Similarity=0.123 Sum_probs=36.8
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCCCCceeecCCCCCCeeee---ccccccccCCCcc
Q psy2686 45 RTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQIC---ARSYTPIYHGRES 121 (139)
Q Consensus 45 r~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~~e~~~~da~~i~yD~~~~F~iC---~~s~tPIy~g~~~ 121 (139)
.....+|-..|++.+|..|-. +++.. ..-.+.-++.|..-+. +++ |+ ...+-+| +..| .|.+.
T Consensus 88 ~~~a~~A~eeg~~~~a~~f~~-i~~~E--~~H~~~~~~~l~~l~~-~~~-----~~-~~~~~~C~~CG~i~----~~~~p 153 (170)
T 3pwf_A 88 PVYNKAAEFQGEKEAVRTTHY-ALEAE--KIHAELYRKAKEKAEK-GED-----IE-IKKVYICPICGYTA----VDEAP 153 (170)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH-HHHHH--HHHHHHHHHHHHHHTT-TCC-----CC-CSCEEECTTTCCEE----ESCCC
T ss_pred HHHHHHHHHCCCHHHHHHHHH-HHHHH--HHHHHHHHHHHHHHhc-CCc-----CC-CCCeeEeCCCCCee----CCCCC
Confidence 344555666666655554432 22211 1113334555555543 332 33 2345555 4444 36777
Q ss_pred ccccCCCcc
Q psy2686 122 EACVYCGAS 130 (139)
Q Consensus 122 v~Cp~cga~ 130 (139)
..||.||+.
T Consensus 154 ~~CP~Cg~~ 162 (170)
T 3pwf_A 154 EYCPVCGAP 162 (170)
T ss_dssp SBCTTTCCB
T ss_pred CCCCCCCCC
Confidence 899999974
No 14
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=72.10 E-value=13 Score=23.41 Aligned_cols=39 Identities=10% Similarity=0.035 Sum_probs=27.5
Q ss_pred HHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q psy2686 50 LFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAICN 88 (139)
Q Consensus 50 ~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~~e 88 (139)
..++.|++..|...-+++++..|....+..++..+....
T Consensus 85 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~ 123 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIR 123 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHH
Confidence 345777788888777888877777777777766665543
No 15
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=71.41 E-value=8.9 Score=29.06 Aligned_cols=75 Identities=9% Similarity=0.024 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCCCCceeecCCCCCCee---eeccccccccCC-C
Q psy2686 44 LRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQ---ICARSYTPIYHG-R 119 (139)
Q Consensus 44 Lr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~~e~~~~da~~i~yD~~~~F~---iC~~s~tPIy~g-~ 119 (139)
+...+.+|...|.+.++..|-. +++- -..-.+..++++..-+... +--. |+ ...- +|+..| .| .
T Consensus 102 y~~~~~~A~eegd~~~~~~f~~-~~~~--E~ehe~~~~~~l~~l~~~~-~~~~---~~-~~~~~C~~CG~~~----~g~~ 169 (191)
T 1lko_A 102 YPSFARIAREEGYEEIARVFAS-IAVA--EEFHEKRFLDFARNIKEGR-VFLR---EQ-ATKWRCRNCGYVH----EGTG 169 (191)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHTC-SSEE---EE-EEEEEETTTCCEE----EEEE
T ss_pred HHHHHHHHHHhCcHHHHHHHHH-HHHH--HHHHHHHHHHHHHhhhccc-cccc---CC-CceEEECCCCCEe----eCCC
Confidence 6677788888888887775543 3332 1233455788887776542 2110 11 0122 455444 46 5
Q ss_pred ccccccCCCcc
Q psy2686 120 ESEACVYCGAS 130 (139)
Q Consensus 120 ~~v~Cp~cga~ 130 (139)
+...||.||+.
T Consensus 170 ~p~~CP~C~~~ 180 (191)
T 1lko_A 170 APELCPACAHP 180 (191)
T ss_dssp CCSBCTTTCCB
T ss_pred CCCCCCCCcCC
Confidence 55699999985
No 16
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=71.09 E-value=6.7 Score=26.85 Aligned_cols=40 Identities=15% Similarity=0.093 Sum_probs=21.8
Q ss_pred HhhhcHHHHHHHHHHHHhcCCC----hHHHHHHHHHHHHhhcCC
Q psy2686 52 FKLKNYKTTASFAHRLLELGPS----MEVATQARKLLAICNANP 91 (139)
Q Consensus 52 ~K~kN~~tAa~fArRLLel~p~----~~~~~qArkil~~~e~~~ 91 (139)
.+.|++..|...-++.|++.|. ....+++++.+....+++
T Consensus 100 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~~~~ 143 (148)
T 2vgx_A 100 LQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEAIKLKK 143 (148)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC----
T ss_pred HHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHHHHhHH
Confidence 4566666666666666666554 344455666665555443
No 17
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=69.78 E-value=2.1 Score=27.99 Aligned_cols=15 Identities=27% Similarity=0.625 Sum_probs=12.3
Q ss_pred CCccccccCCCcccc
Q psy2686 118 GRESEACVYCGASYL 132 (139)
Q Consensus 118 g~~~v~Cp~cga~y~ 132 (139)
..+.++||+||.+.+
T Consensus 35 ~~~~iRC~~CG~RIL 49 (63)
T 3h0g_L 35 AKEVIRCRECGHRVM 49 (63)
T ss_dssp SSSCCCCSSSCCCCC
T ss_pred CCCceECCCCCcEEE
Confidence 357799999999876
No 18
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=68.53 E-value=1.8 Score=29.41 Aligned_cols=41 Identities=22% Similarity=0.109 Sum_probs=26.2
Q ss_pred eecCCCCCCeeeec--cccccc----cCCCccccccCCCccccCCCCC
Q psy2686 96 TIDYDEHNPFQICA--RSYTPI----YHGRESEACVYCGASYLPKYKG 137 (139)
Q Consensus 96 ~i~yD~~~~F~iC~--~s~tPI----y~g~~~v~Cp~cga~y~p~~kG 137 (139)
.--||++--=-+|. -+...+ .+| +..+||.||..|.=.+.|
T Consensus 26 pS~~~~RiVGC~g~p~d~h~v~W~~l~~g-~~~RC~eCG~~fkL~~vg 72 (80)
T 2odx_A 26 ESYDDYRYVGCTGSPAGSHTIMWLKPTVN-EVARCWECGSVYKLNPVG 72 (80)
T ss_dssp CCSSSSCCEEESSSTTCCSCCEEECCCTT-CEEECSSSCCEEEECCCC
T ss_pred cCCCCCeEEeeeCCCCCcceEEEEEecCC-CCeECCCCCeEEEEEEcC
Confidence 33455552222332 355554 478 788999999999877766
No 19
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=68.37 E-value=12 Score=24.27 Aligned_cols=38 Identities=18% Similarity=0.293 Sum_probs=30.1
Q ss_pred HHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q psy2686 49 NLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAI 86 (139)
Q Consensus 49 ~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~ 86 (139)
...+|.|++..|..+-++.|++.|....+..-.+.+..
T Consensus 54 ~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~~~~ 91 (104)
T 2v5f_A 54 YAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEY 91 (104)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHHHHHH
Confidence 45589999999999999999999987776554444443
No 20
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=68.05 E-value=2.4 Score=21.51 Aligned_cols=16 Identities=19% Similarity=0.615 Sum_probs=12.9
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 3 ~~~k~~~C~~C~k~f~ 18 (35)
T 2elx_A 3 SGSSGYVCALCLKKFV 18 (35)
T ss_dssp CCCCSEECSSSCCEES
T ss_pred CCCCCeECCCCcchhC
Confidence 4667789999998875
No 21
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=66.93 E-value=3.1 Score=21.50 Aligned_cols=17 Identities=24% Similarity=0.444 Sum_probs=13.7
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
..|....+|+.||..|.
T Consensus 6 h~~~k~~~C~~C~k~f~ 22 (37)
T 1p7a_A 6 STGIKPFQCPDCDRSFS 22 (37)
T ss_dssp TCCSSSBCCTTTCCCBS
T ss_pred CCCCCCccCCCCCcccC
Confidence 45777789999998875
No 22
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=64.46 E-value=1.5 Score=30.19 Aligned_cols=12 Identities=25% Similarity=0.697 Sum_probs=10.2
Q ss_pred cccCCCccccCC
Q psy2686 123 ACVYCGASYLPK 134 (139)
Q Consensus 123 ~Cp~cga~y~p~ 134 (139)
.||+||+..+|.
T Consensus 49 ~CPvCgs~l~~~ 60 (112)
T 1l8d_A 49 KCPVCGRELTDE 60 (112)
T ss_dssp ECTTTCCEECHH
T ss_pred CCCCCCCcCCHH
Confidence 599999988764
No 23
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=61.51 E-value=17 Score=23.66 Aligned_cols=27 Identities=15% Similarity=0.044 Sum_probs=24.1
Q ss_pred HHHHHhhhcHHHHHHHHHHHHhcCCCh
Q psy2686 48 TNLFFKLKNYKTTASFAHRLLELGPSM 74 (139)
Q Consensus 48 m~~~~K~kN~~tAa~fArRLLel~p~~ 74 (139)
-..+|+.|+|..|...=+++|+.+|..
T Consensus 50 g~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 50 ANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 457899999999999999999998873
No 24
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=59.96 E-value=3.8 Score=27.09 Aligned_cols=23 Identities=22% Similarity=0.566 Sum_probs=14.9
Q ss_pred eccccccccCCCccccccCCCcccc
Q psy2686 108 CARSYTPIYHGRESEACVYCGASYL 132 (139)
Q Consensus 108 C~~s~tPIy~g~~~v~Cp~cga~y~ 132 (139)
|...+.. .....+.||.||.+.+
T Consensus 34 CG~~~e~--~~~d~irCp~CG~RIL 56 (70)
T 1twf_L 34 CSSKLSL--SRTDAVRCKDCGHRIL 56 (70)
T ss_dssp SCCEECC--CTTSTTCCSSSCCCCC
T ss_pred CCCccee--CCCCCccCCCCCceEe
Confidence 3444433 2456789999999544
No 25
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.32 E-value=4.1 Score=21.03 Aligned_cols=17 Identities=18% Similarity=0.598 Sum_probs=13.5
Q ss_pred CCCccccccCCCccccC
Q psy2686 117 HGRESEACVYCGASYLP 133 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~p 133 (139)
.|....+|+.||..|..
T Consensus 5 ~~~k~~~C~~C~k~f~~ 21 (37)
T 2elp_A 5 SSGRAMKCPYCDFYFMK 21 (37)
T ss_dssp CCCCCEECSSSSCEECS
T ss_pred CCCCCeECCCCChhhcc
Confidence 46677899999998764
No 26
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=58.64 E-value=4.6 Score=20.49 Aligned_cols=17 Identities=18% Similarity=0.552 Sum_probs=13.2
Q ss_pred CCCccccccCCCccccC
Q psy2686 117 HGRESEACVYCGASYLP 133 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~p 133 (139)
.|+....|+.||..|..
T Consensus 3 ~~~k~~~C~~C~k~f~~ 19 (35)
T 1srk_A 3 SGKRPFVCRICLSAFTT 19 (35)
T ss_dssp SCCSCEECSSSCCEESS
T ss_pred CCCcCeeCCCCCcccCC
Confidence 46677899999998753
No 27
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=58.16 E-value=3.6 Score=28.12 Aligned_cols=24 Identities=33% Similarity=0.614 Sum_probs=15.6
Q ss_pred eecccccc--------ccCCCcc------ccccCCCcc
Q psy2686 107 ICARSYTP--------IYHGRES------EACVYCGAS 130 (139)
Q Consensus 107 iC~~s~tP--------Iy~g~~~------v~Cp~cga~ 130 (139)
+|...|.| |-.|++. -.||.||+.
T Consensus 32 vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 32 QCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp TTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred CCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 67777776 3344432 279999984
No 28
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.67 E-value=6.3 Score=21.40 Aligned_cols=20 Identities=20% Similarity=0.521 Sum_probs=13.9
Q ss_pred ccccCCCccccccCCCcccc
Q psy2686 113 TPIYHGRESEACVYCGASYL 132 (139)
Q Consensus 113 tPIy~g~~~v~Cp~cga~y~ 132 (139)
..+-.|.....|+.||..|.
T Consensus 4 ~~~H~~~k~~~C~~C~k~f~ 23 (46)
T 2epz_A 4 GSSGTGEKPFDCIDCGKAFS 23 (46)
T ss_dssp CSSCCCCCSBCCTTTCCCBS
T ss_pred CCCcCCCCCeECCCCCceeC
Confidence 33445677778888888764
No 29
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.59 E-value=4.1 Score=20.95 Aligned_cols=16 Identities=25% Similarity=0.507 Sum_probs=12.9
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 5 ~~~k~~~C~~C~k~f~ 20 (37)
T 2elo_A 5 SSGRSYSCPVCEKSFS 20 (37)
T ss_dssp CCCCCCEETTTTEECS
T ss_pred CCCCCcCCCCCCCccC
Confidence 4667789999998875
No 30
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.80 E-value=6.9 Score=21.30 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=13.8
Q ss_pred cccCCCccccccCCCcccc
Q psy2686 114 PIYHGRESEACVYCGASYL 132 (139)
Q Consensus 114 PIy~g~~~v~Cp~cga~y~ 132 (139)
.+-.|+....|+.||..|.
T Consensus 5 ~~h~~~k~~~C~~C~k~F~ 23 (46)
T 2elz_A 5 SSGSVEKPYKCEDCGKGYN 23 (46)
T ss_dssp SCCCCCSSCBCSSSCCBCS
T ss_pred CCCCCCCCeeCcccCchhC
Confidence 3456777788888888764
No 31
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=55.44 E-value=4.2 Score=27.02 Aligned_cols=18 Identities=33% Similarity=0.713 Sum_probs=14.7
Q ss_pred cCCCccccccCCCccccCC
Q psy2686 116 YHGRESEACVYCGASYLPK 134 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~p~ 134 (139)
-.|....+|| ||+....+
T Consensus 16 ~~~~kT~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 16 REGAKTRKCV-CGRTVNVK 33 (71)
T ss_dssp ETTCSEEEET-TTEEEECC
T ss_pred cCCCcEEECC-CCCeeeec
Confidence 3689999999 99987643
No 32
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=55.43 E-value=4.2 Score=28.56 Aligned_cols=22 Identities=18% Similarity=0.593 Sum_probs=15.6
Q ss_pred eccccccccCCCccc-cccCCCcccc
Q psy2686 108 CARSYTPIYHGRESE-ACVYCGASYL 132 (139)
Q Consensus 108 C~~s~tPIy~g~~~v-~Cp~cga~y~ 132 (139)
|...|.+ ..+.. .||.||+.-.
T Consensus 79 CG~~~e~---~~~~~~~CP~Cgs~~~ 101 (119)
T 2kdx_A 79 CSHVFKP---NALDYGVCEKCHSKNV 101 (119)
T ss_dssp SSCEECS---CCSTTCCCSSSSSCCC
T ss_pred CCCEEeC---CCCCCCcCccccCCCc
Confidence 5666655 35667 8999999743
No 33
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.78 E-value=5.1 Score=20.95 Aligned_cols=18 Identities=17% Similarity=0.159 Sum_probs=13.8
Q ss_pred cCCCccccccCCCccccC
Q psy2686 116 YHGRESEACVYCGASYLP 133 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~p 133 (139)
..|+...+|+.||..|..
T Consensus 4 H~~~k~~~C~~C~k~f~~ 21 (37)
T 2elm_A 4 GSSGHLYYCSQCHYSSIT 21 (37)
T ss_dssp SSSSCEEECSSSSCEEEC
T ss_pred cCCCcCeECCCCCcccCC
Confidence 356777899999998753
No 34
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.11 E-value=5.3 Score=20.44 Aligned_cols=15 Identities=20% Similarity=0.587 Sum_probs=12.0
Q ss_pred CCccccccCCCcccc
Q psy2686 118 GRESEACVYCGASYL 132 (139)
Q Consensus 118 g~~~v~Cp~cga~y~ 132 (139)
+.....|++||..|.
T Consensus 6 ~~k~~~C~~C~k~f~ 20 (36)
T 2els_A 6 SGKIFTCEYCNKVFK 20 (36)
T ss_dssp CCCCEECTTTCCEES
T ss_pred CCCCEECCCCCceeC
Confidence 556678999998875
No 35
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.04 E-value=6.6 Score=21.31 Aligned_cols=19 Identities=21% Similarity=0.585 Sum_probs=14.3
Q ss_pred cccCCCccccccCCCcccc
Q psy2686 114 PIYHGRESEACVYCGASYL 132 (139)
Q Consensus 114 PIy~g~~~v~Cp~cga~y~ 132 (139)
-+..|.....|+.||..|.
T Consensus 5 ~~H~~~~~~~C~~C~k~F~ 23 (46)
T 2emi_A 5 SSGTGERHYECSECGKAFI 23 (46)
T ss_dssp CSCSSCCCEECSSSCCEES
T ss_pred cccCCCCCCCCCCCCcccC
Confidence 3445777789999998775
No 36
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=53.82 E-value=59 Score=24.35 Aligned_cols=39 Identities=10% Similarity=0.095 Sum_probs=23.7
Q ss_pred cCCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCC
Q psy2686 33 SKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGP 72 (139)
Q Consensus 33 c~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p 72 (139)
.++.|.+...-.+.|.. .++.|+|..|...-++.++++|
T Consensus 65 l~~~p~~~~~~~~lg~~-~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 65 LELDGQSVKAHFFLGQC-QLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TTSCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHhCc
Confidence 45566555544444443 3467777777777777776654
No 37
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.70 E-value=5.4 Score=20.24 Aligned_cols=16 Identities=13% Similarity=0.281 Sum_probs=12.8
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 5 ~~~k~~~C~~C~k~f~ 20 (36)
T 2elt_A 5 SSGKPYKCPQCSYASA 20 (36)
T ss_dssp CCCCSEECSSSSCEES
T ss_pred CCCCCCCCCCCCcccC
Confidence 4666789999998875
No 38
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=53.39 E-value=5.7 Score=25.03 Aligned_cols=8 Identities=38% Similarity=1.182 Sum_probs=7.1
Q ss_pred cccCCCcc
Q psy2686 123 ACVYCGAS 130 (139)
Q Consensus 123 ~Cp~cga~ 130 (139)
.||.||+.
T Consensus 38 ~CP~Cg~~ 45 (54)
T 4rxn_A 38 VCPLCGVG 45 (54)
T ss_dssp BCTTTCCB
T ss_pred cCcCCCCc
Confidence 89999986
No 39
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=52.75 E-value=4.7 Score=27.87 Aligned_cols=24 Identities=33% Similarity=0.729 Sum_probs=16.1
Q ss_pred eecccccc--------ccCCCccc------cccCCCcc
Q psy2686 107 ICARSYTP--------IYHGRESE------ACVYCGAS 130 (139)
Q Consensus 107 iC~~s~tP--------Iy~g~~~v------~Cp~cga~ 130 (139)
+|...|.| |-.|++.. .||.||+.
T Consensus 40 vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 77 (87)
T 1s24_A 40 TCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGAT 77 (87)
T ss_dssp TTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCC
T ss_pred CCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCCC
Confidence 67777776 33455544 69999984
No 40
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.75 E-value=7.4 Score=21.16 Aligned_cols=19 Identities=16% Similarity=0.513 Sum_probs=14.1
Q ss_pred cccCCCccccccCCCcccc
Q psy2686 114 PIYHGRESEACVYCGASYL 132 (139)
Q Consensus 114 PIy~g~~~v~Cp~cga~y~ 132 (139)
-+..|....+|+.||..|.
T Consensus 5 ~~H~~~k~~~C~~C~k~f~ 23 (46)
T 2eoh_A 5 SSGSGKKPYECKECRKTFI 23 (46)
T ss_dssp CSCCCSCSCCCSSSCCCCS
T ss_pred CCcCCCCCcCCCCcCchhC
Confidence 3445777788999998775
No 41
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.73 E-value=7.1 Score=21.26 Aligned_cols=19 Identities=21% Similarity=0.600 Sum_probs=14.4
Q ss_pred cccCCCccccccCCCcccc
Q psy2686 114 PIYHGRESEACVYCGASYL 132 (139)
Q Consensus 114 PIy~g~~~v~Cp~cga~y~ 132 (139)
-+..|.....|+.||..|.
T Consensus 5 ~~H~~~k~~~C~~C~k~f~ 23 (46)
T 2em4_A 5 SSGTGQRPYECIECGKAFK 23 (46)
T ss_dssp CCCCCSSSEECSSSCCEES
T ss_pred cccCCCcCcCCCCCCCccC
Confidence 3456777789999998875
No 42
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.72 E-value=7.1 Score=20.59 Aligned_cols=18 Identities=22% Similarity=0.536 Sum_probs=14.0
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+..|.....|+.||..|.
T Consensus 5 ~H~~~k~~~C~~C~k~f~ 22 (42)
T 2ytb_A 5 SSGGEKPYRCDQCGKAFS 22 (42)
T ss_dssp CCCSCCSBCCTTTTCCBS
T ss_pred ccCCCCCeeCCCccchhC
Confidence 345677789999998875
No 43
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.43 E-value=8.4 Score=20.85 Aligned_cols=18 Identities=22% Similarity=0.479 Sum_probs=13.6
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+..|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2emg_A 6 SGTGENPFICSECGKVFT 23 (46)
T ss_dssp CCCSCCSCBCTTTCCBCS
T ss_pred CCCCCCCEECCccCcccC
Confidence 445677788999998775
No 44
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=51.38 E-value=7.2 Score=24.21 Aligned_cols=8 Identities=50% Similarity=1.277 Sum_probs=6.9
Q ss_pred cccCCCcc
Q psy2686 123 ACVYCGAS 130 (139)
Q Consensus 123 ~Cp~cga~ 130 (139)
.||.||+.
T Consensus 37 ~CP~Cg~~ 44 (52)
T 1yk4_A 37 VCPLCGAP 44 (52)
T ss_dssp BCTTTCCB
T ss_pred cCCCCCCC
Confidence 79999985
No 45
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=51.18 E-value=6.5 Score=20.75 Aligned_cols=17 Identities=29% Similarity=0.595 Sum_probs=13.6
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
..|+....|+.||..|.
T Consensus 6 H~~~~~~~C~~C~k~f~ 22 (42)
T 2epc_A 6 SGGETPYLCGQCGKSFT 22 (42)
T ss_dssp CCSSCCEECSSSCCEES
T ss_pred CCCCCCeECCCCCcccC
Confidence 45677789999998875
No 46
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.69 E-value=8.1 Score=21.07 Aligned_cols=19 Identities=21% Similarity=0.522 Sum_probs=13.6
Q ss_pred cccCCCccccccCCCcccc
Q psy2686 114 PIYHGRESEACVYCGASYL 132 (139)
Q Consensus 114 PIy~g~~~v~Cp~cga~y~ 132 (139)
.+-.|....+|+.||..|.
T Consensus 5 ~~h~~~k~~~C~~C~k~f~ 23 (46)
T 2ytm_A 5 SSGTGEKPYKCMECGKAFG 23 (46)
T ss_dssp CCCSSCCSSSBTTTTBCCS
T ss_pred cCCCCCCCcCCCCCCchhC
Confidence 3445677778999988765
No 47
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.42 E-value=7.7 Score=20.42 Aligned_cols=17 Identities=18% Similarity=0.563 Sum_probs=13.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|+...+|+.||..|.
T Consensus 5 H~~~k~~~C~~C~k~f~ 21 (42)
T 2yte_A 5 SSGEKPYSCAECKETFS 21 (42)
T ss_dssp SCSCCSCBCTTTCCBCS
T ss_pred cCCCCCeECCCCCCccC
Confidence 35677789999998875
No 48
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.00 E-value=9.8 Score=20.63 Aligned_cols=18 Identities=22% Similarity=0.545 Sum_probs=12.8
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2ytq_A 6 SGAGEKPYGCSECGKAFS 23 (46)
T ss_dssp CSSCCCSCBCSSSCCBCS
T ss_pred CcCCCCCcCCCccChhhC
Confidence 445667778888887764
No 49
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.84 E-value=7.3 Score=19.70 Aligned_cols=17 Identities=18% Similarity=0.602 Sum_probs=13.1
Q ss_pred CCCccccccCCCccccC
Q psy2686 117 HGRESEACVYCGASYLP 133 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~p 133 (139)
.|.....|+.||..|..
T Consensus 5 ~~~~~~~C~~C~k~f~~ 21 (36)
T 2elr_A 5 SSGKTHLCDMCGKKFKS 21 (36)
T ss_dssp CCCSSCBCTTTCCBCSS
T ss_pred CCCCCeecCcCCCCcCc
Confidence 45667899999988753
No 50
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.73 E-value=7 Score=20.90 Aligned_cols=18 Identities=22% Similarity=0.519 Sum_probs=13.9
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (44)
T 2eoj_A 6 SGTGENPYECCECGKVFS 23 (44)
T ss_dssp SSSSCCSCEETTTTEECS
T ss_pred ccCCCcCeeCCCCCCccC
Confidence 445777789999998765
No 51
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.59 E-value=8.5 Score=20.85 Aligned_cols=18 Identities=22% Similarity=0.475 Sum_probs=12.7
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|....+|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2ene_A 6 SGTGEKPYKCNECGKVFR 23 (46)
T ss_dssp SCCCSSSEECSSSCCEES
T ss_pred CCCCCCCeECCCCCchhC
Confidence 345666778888887764
No 52
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.54 E-value=8.3 Score=20.94 Aligned_cols=18 Identities=22% Similarity=0.519 Sum_probs=13.2
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|....+|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~F~ 23 (46)
T 2emf_A 6 SGTGGKHFECTECGKAFT 23 (46)
T ss_dssp SSSSSCCEECSSSCCEES
T ss_pred ccCCCCCeECCCCCchhC
Confidence 445677788999988764
No 53
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.51 E-value=6.5 Score=20.08 Aligned_cols=17 Identities=12% Similarity=0.255 Sum_probs=13.0
Q ss_pred CCCccccccCCCccccC
Q psy2686 117 HGRESEACVYCGASYLP 133 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~p 133 (139)
.|....+|+.||..|..
T Consensus 5 ~~~k~~~C~~C~k~f~~ 21 (36)
T 2elq_A 5 SSGKPFKCSLCEYATRS 21 (36)
T ss_dssp CCCCSEECSSSSCEESC
T ss_pred CCCCCccCCCCCchhCC
Confidence 35667899999988753
No 54
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.36 E-value=7.6 Score=20.49 Aligned_cols=17 Identities=29% Similarity=0.643 Sum_probs=13.4
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
..|+....|+.||..|.
T Consensus 5 h~~~k~~~C~~C~k~f~ 21 (41)
T 2ept_A 5 SSGQRVYECQECGKSFR 21 (41)
T ss_dssp CCCCCCEECSSSCCEES
T ss_pred cCCCCCeECCCCCCCcC
Confidence 35677789999998875
No 55
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=49.31 E-value=6.1 Score=28.85 Aligned_cols=47 Identities=13% Similarity=0.216 Sum_probs=24.1
Q ss_pred HHHhhcCCCCceeecC--CCCCCee-eeccccccccC-CCccccccCCCccc
Q psy2686 84 LAICNANPTDEHTIDY--DEHNPFQ-ICARSYTPIYH-GRESEACVYCGASY 131 (139)
Q Consensus 84 l~~~e~~~~da~~i~y--D~~~~F~-iC~~s~tPIy~-g~~~v~Cp~cga~y 131 (139)
-..|+..+..-+.+.. .....|. .|..-.+- |. ..+...||.||+..
T Consensus 108 ~~vA~~~Gv~v~~~~~~i~~~~~~~y~C~~Cg~~-~~~~~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 108 QNIASLLGLRFRTLKRGIKKVIKWRYVCIGCGRK-FSTLPPGGVCPDCGSKV 158 (165)
T ss_dssp HHHHHHTTCCEECCSCCCSSCCCCCEEESSSCCE-ESSCCGGGBCTTTCCBE
T ss_pred HHHHHHCCCeEEchhhhccccccEEEECCCCCCc-ccCCCCCCcCCCCCCcc
Confidence 3444555555555541 1112222 44444432 33 25667999999974
No 56
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=49.07 E-value=7 Score=27.95 Aligned_cols=86 Identities=12% Similarity=0.154 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcC--CChH-HHHHHHHHHHHhhcCCCCceeecCCCCCCeeeeccccccc
Q psy2686 39 HQILTLRTATNLFFKLKNYKTTASFAHRLLELG--PSME-VATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPI 115 (139)
Q Consensus 39 H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~--p~~~-~~~qArkil~~~e~~~~da~~i~yD~~~~F~iC~~s~tPI 115 (139)
|-.-+.|..+--... ++-.||..++.. |++. +..+ +.+--..|..--.+++ ..=+-|+.. =.-|+..| .
T Consensus 7 ~~~~T~Re~Ii~lL~-~~plta~ei~~~-l~i~~~~~ke~Vy~hLeHIaksl~r~g--~~L~v~p~~--C~~CG~~F--~ 78 (105)
T 2gmg_A 7 HGSATRREKIIELLL-EGDYSPSELARI-LDMRGKGSKKVILEDLKVISKIAKREG--MVLLIKPAQ--CRKCGFVF--K 78 (105)
T ss_dssp CCHHHHHHHHHHHTT-TSCBCTTHHHHS-SCCCSSCCHHHHHHHHHHHHHHHTTTT--EEEEECCCB--BTTTCCBC--C
T ss_pred cCcccHHHHHHHHHH-cCCCCHHHHHHH-hCCCCCChHHHHHHHHHHHHHHHhcCC--cEEEEECcC--hhhCcCee--c
Confidence 344566666666665 677777777764 4553 2233 5555444444444443 222233322 22477777 2
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
.+-....+||.|+|.-.
T Consensus 79 ~~~~kPsrCP~CkSe~I 95 (105)
T 2gmg_A 79 AEINIPSRCPKCKSEWI 95 (105)
T ss_dssp CCSSCCSSCSSSCCCCB
T ss_pred ccCCCCCCCcCCCCCcc
Confidence 34456689999998654
No 57
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.92 E-value=8.1 Score=19.67 Aligned_cols=16 Identities=13% Similarity=0.279 Sum_probs=12.5
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|....+|+.||..|.
T Consensus 5 ~~~k~~~C~~C~k~f~ 20 (36)
T 2elv_A 5 SSGLLYDCHICERKFK 20 (36)
T ss_dssp CCCCCEECSSSCCEES
T ss_pred CCCCCeECCCCCCccC
Confidence 4566778999998875
No 58
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.84 E-value=9 Score=20.52 Aligned_cols=19 Identities=16% Similarity=0.342 Sum_probs=14.3
Q ss_pred ccCCCccccccCCCccccC
Q psy2686 115 IYHGRESEACVYCGASYLP 133 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~p 133 (139)
+-.|+...+|+.||..|.-
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (44)
T 2yu5_A 6 SGAGENPFKCSKCDRVFTQ 24 (44)
T ss_dssp CCSCCCSEECSSSSCEESS
T ss_pred ccCCCCCeECCCCCchhCC
Confidence 3456777899999988753
No 59
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=48.80 E-value=40 Score=23.89 Aligned_cols=63 Identities=22% Similarity=0.330 Sum_probs=41.3
Q ss_pred HHHHhhhcCCchhhH-HH------HHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q psy2686 26 LAAYFTHSKLQPVHQ-IL------TLRTATNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAICN 88 (139)
Q Consensus 26 LaAYFT~c~Lqp~H~-~L------aLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~~e 88 (139)
.+-|-+.=+|.-.-. .| .|-.--..+|+.+||..|..|-+..+.+..++..-+-+.=.+..|.
T Consensus 31 F~~YV~kn~Lkel~~~ll~e~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~ 100 (106)
T 2vkj_A 31 FENYVKKEGLKIEGMELLKEKKARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECR 100 (106)
T ss_dssp HHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcchhhHHHHhhhHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHH
Confidence 445666666554433 22 2222346789999999999999999999988877554444444443
No 60
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=48.72 E-value=7.3 Score=24.45 Aligned_cols=8 Identities=38% Similarity=1.066 Sum_probs=6.9
Q ss_pred cccCCCcc
Q psy2686 123 ACVYCGAS 130 (139)
Q Consensus 123 ~Cp~cga~ 130 (139)
.||.||+.
T Consensus 38 ~CP~Cga~ 45 (55)
T 2v3b_B 38 VCPDCGVG 45 (55)
T ss_dssp CCTTTCCC
T ss_pred cCCCCCCC
Confidence 79999984
No 61
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=48.45 E-value=4.5 Score=29.49 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHhhcCCCCceeecCCCCCCeee---ecccccccc--------CCCc----------cccccCCCccc
Q psy2686 74 MEVATQARKLLAICNANPTDEHTIDYDEHNPFQI---CARSYTPIY--------HGRE----------SEACVYCGASY 131 (139)
Q Consensus 74 ~~~~~qArkil~~~e~~~~da~~i~yD~~~~F~i---C~~s~tPIy--------~g~~----------~v~Cp~cga~y 131 (139)
++....|=.++... ..-.--+|+.+..-..-. |+..|++-. ..++ ...||.||+.-
T Consensus 41 ~e~l~faf~~~~~g--t~~e~A~L~i~~~p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~~ 117 (139)
T 3a43_A 41 EDIVKFAMEQLFAG--TIAEGAEIEFVEEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHD 117 (139)
T ss_dssp HHHHHHHHHHHHTT--STTTTCEEEEEEECCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCCC
T ss_pred HHHHHHHHHHHHcC--CcccCCEEEEEecCCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCCc
Confidence 66666666655321 122222555544444444 456665421 0114 78999999863
No 62
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.38 E-value=9.1 Score=20.50 Aligned_cols=18 Identities=28% Similarity=0.501 Sum_probs=13.8
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (44)
T 2emb_A 6 SGHTRKRYECSKCQATFN 23 (44)
T ss_dssp CCCCCSSEECTTTCCEES
T ss_pred ccCCCCCeECCCCCCccC
Confidence 345677789999998875
No 63
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.09 E-value=7.5 Score=21.07 Aligned_cols=18 Identities=28% Similarity=0.552 Sum_probs=13.1
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|....+|+.||..|.
T Consensus 6 ~h~~~k~~~C~~C~k~f~ 23 (46)
T 2ysp_A 6 SGTGEKPYKCEKCGKGYN 23 (46)
T ss_dssp CCSSCCSEEETTTTEEES
T ss_pred CCCCCCCeECCCCCCccC
Confidence 445677788888887764
No 64
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=47.63 E-value=45 Score=20.19 Aligned_cols=41 Identities=22% Similarity=0.320 Sum_probs=31.6
Q ss_pred HHHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q psy2686 48 TNLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAICN 88 (139)
Q Consensus 48 m~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~~e 88 (139)
-...++.|+|..|..+-++.+++.|++.......++...-.
T Consensus 86 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 86 GNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 34467899999999999999999998777666555555443
No 65
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=47.63 E-value=8.3 Score=20.37 Aligned_cols=17 Identities=24% Similarity=0.632 Sum_probs=13.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 5 H~~~k~~~C~~C~k~f~ 21 (42)
T 2el5_A 5 SSGENPYECSECGKAFN 21 (42)
T ss_dssp SSSCCSEECSSSCCEES
T ss_pred CCCCCCccCCCcChhhC
Confidence 35677789999998875
No 66
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.62 E-value=9.7 Score=20.65 Aligned_cols=18 Identities=22% Similarity=0.503 Sum_probs=13.8
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+..|....+|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2em2_A 6 SGSGEKPFKCKECGKAFR 23 (46)
T ss_dssp SCCCCCSEECSSSCCEES
T ss_pred CCCCCCCEECCcCCchhC
Confidence 445777788999998775
No 67
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.50 E-value=9.4 Score=20.22 Aligned_cols=18 Identities=22% Similarity=0.595 Sum_probs=14.0
Q ss_pred cCCCccccccCCCccccC
Q psy2686 116 YHGRESEACVYCGASYLP 133 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~p 133 (139)
..|+....|+.||..|..
T Consensus 6 H~~~k~~~C~~C~k~f~~ 23 (42)
T 2eos_A 6 SGGEKPYPCEICGTRFRH 23 (42)
T ss_dssp CSSSCCBCCSSSCCCBSS
T ss_pred cCCCCCEECCCCCCccCC
Confidence 356777899999988753
No 68
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.44 E-value=9.6 Score=20.60 Aligned_cols=18 Identities=22% Similarity=0.492 Sum_probs=14.1
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|....+|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~F~ 23 (46)
T 2enf_A 6 SGTGEKPYKCNECGKVFT 23 (46)
T ss_dssp CCCCCCSCBCSSSCCBCS
T ss_pred CCCCCcCeECCCCCcccC
Confidence 345677789999998875
No 69
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=47.28 E-value=7.6 Score=21.82 Aligned_cols=16 Identities=31% Similarity=0.657 Sum_probs=12.9
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|....+|+.||..|.
T Consensus 3 t~~kp~~C~~C~k~F~ 18 (48)
T 3iuf_A 3 DRDKPYACDICGKRYK 18 (48)
T ss_dssp TTTSCEECTTTCCEES
T ss_pred CCCcCEECCCcCcccC
Confidence 4667789999998875
No 70
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.00 E-value=9.9 Score=20.40 Aligned_cols=18 Identities=17% Similarity=0.451 Sum_probs=13.7
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~h~~~~~~~C~~C~k~f~ 23 (44)
T 2eou_A 6 SGAAKTTSECQECGKIFR 23 (44)
T ss_dssp SCSSSCCCCCTTTCCCCS
T ss_pred CCCCCcCeECCCCCcccC
Confidence 345677788999998875
No 71
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=46.48 E-value=9.6 Score=23.63 Aligned_cols=8 Identities=75% Similarity=1.402 Sum_probs=7.1
Q ss_pred cccCCCcc
Q psy2686 123 ACVYCGAS 130 (139)
Q Consensus 123 ~Cp~cga~ 130 (139)
.||.||+.
T Consensus 38 ~CP~Cg~~ 45 (52)
T 1e8j_A 38 ACPVCGAS 45 (52)
T ss_dssp CCSSSCCC
T ss_pred cCCCCCCc
Confidence 79999984
No 72
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.37 E-value=11 Score=20.29 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=12.0
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2eq4_A 7 GTGEKLYNCKECGKSFS 23 (46)
T ss_dssp SSCCCCCCBTTTTBCCS
T ss_pred CCCCCCeECCCCCCccC
Confidence 34666678888887764
No 73
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.33 E-value=11 Score=20.28 Aligned_cols=18 Identities=28% Similarity=0.654 Sum_probs=13.5
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2ep1_A 6 SGTGEKPYECSDCGKSFI 23 (46)
T ss_dssp CCSSCCSSCCSSSCCCCS
T ss_pred CCCCCCCcCCCCCCchhC
Confidence 345677788999998764
No 74
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.30 E-value=12 Score=20.11 Aligned_cols=17 Identities=24% Similarity=0.833 Sum_probs=12.1
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (47)
T 2epx_A 7 GTGKKPYECIECGKAFI 23 (47)
T ss_dssp CCCCCSBCCSSSCCCBS
T ss_pred cCCCCCEECCccCchhC
Confidence 34666678888887764
No 75
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=46.15 E-value=7.5 Score=18.41 Aligned_cols=12 Identities=17% Similarity=0.376 Sum_probs=9.5
Q ss_pred cccccCCCcccc
Q psy2686 121 SEACVYCGASYL 132 (139)
Q Consensus 121 ~v~Cp~cga~y~ 132 (139)
...|+.||..|.
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvh_A 3 PFSCSLCPQRSR 14 (27)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCcChhhC
Confidence 357999998875
No 76
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.06 E-value=12 Score=20.33 Aligned_cols=19 Identities=16% Similarity=0.359 Sum_probs=14.1
Q ss_pred ccCCCccccccCCCccccC
Q psy2686 115 IYHGRESEACVYCGASYLP 133 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~p 133 (139)
+..|.....|+.||..|.-
T Consensus 6 ~h~~~k~~~C~~C~k~F~~ 24 (46)
T 2enh_A 6 SGTGEKPYECDVCRKAFSH 24 (46)
T ss_dssp CCCCSSSCBCTTTCCBCSS
T ss_pred CcCCCCCcCCCCcCchhCC
Confidence 3456777889999988753
No 77
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=45.90 E-value=12 Score=20.19 Aligned_cols=19 Identities=26% Similarity=0.538 Sum_probs=13.3
Q ss_pred ccCCCccccccCCCccccC
Q psy2686 115 IYHGRESEACVYCGASYLP 133 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~p 133 (139)
+-.|+...+|+.||..|.-
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ely_A 6 SGTGEKPFKCVECGKGFSR 24 (46)
T ss_dssp CCCCCCSBCCSSSCCCBSS
T ss_pred CCCCCCCcccCccCcccCC
Confidence 3456667788888887753
No 78
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=45.75 E-value=40 Score=22.69 Aligned_cols=45 Identities=11% Similarity=0.204 Sum_probs=24.9
Q ss_pred HHhhhcCCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 28 AYFTHSKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 28 AYFT~c~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
.|-......|.+-..-+..| .+.++.|+|..|...-++.|+++|.
T Consensus 19 ~~~~a~~~~p~~~~~~~~la-~~y~~~~~~~~A~~~~~~al~~~p~ 63 (150)
T 4ga2_A 19 SVQGSTPSPRQKSIKGFYFA-KLYYEAKEYDLAKKYICTYINVQER 63 (150)
T ss_dssp HHHHHSCSHHHHHTTHHHHH-HHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHhcccCcccHHHHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34444455555444333333 2345667777777777777776665
No 79
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=45.65 E-value=6.8 Score=23.91 Aligned_cols=23 Identities=30% Similarity=0.774 Sum_probs=14.3
Q ss_pred eeccccccccCCCc--------cccccCCCcc
Q psy2686 107 ICARSYTPIYHGRE--------SEACVYCGAS 130 (139)
Q Consensus 107 iC~~s~tPIy~g~~--------~v~Cp~cga~ 130 (139)
||...|.|- .|.| .-+||.||+.
T Consensus 9 vCGyvyd~~-~Gd~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 9 VCGYEYDPA-EHDNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp TTCCEECGG-GGTTCCGGGSCTTCBCTTTCCB
T ss_pred CCCeEEeCC-cCCCcchhhCCCCCcCcCCCCc
Confidence 566666553 2431 2489999985
No 80
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.45 E-value=9.2 Score=20.31 Aligned_cols=19 Identities=16% Similarity=0.349 Sum_probs=14.5
Q ss_pred ccCCCccccccCCCccccC
Q psy2686 115 IYHGRESEACVYCGASYLP 133 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~p 133 (139)
+-.|.....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (44)
T 2eof_A 6 SGTGEKPYECNECQKAFNT 24 (44)
T ss_dssp CCSCCCSEECTTTCCEESC
T ss_pred CCCCCCCeECCCCCcccCC
Confidence 3457777899999988753
No 81
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=45.43 E-value=11 Score=20.46 Aligned_cols=18 Identities=28% Similarity=0.564 Sum_probs=13.8
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~F~ 23 (46)
T 2emj_A 6 SGTGEKPFECAECGKSFS 23 (46)
T ss_dssp CCCCCCSEECSSSSCEES
T ss_pred CCCCCCCEECCCCCcccC
Confidence 345677788999998875
No 82
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=45.17 E-value=51 Score=21.63 Aligned_cols=23 Identities=13% Similarity=0.223 Sum_probs=15.1
Q ss_pred HHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 51 FFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 51 ~~K~kN~~tAa~fArRLLel~p~ 73 (139)
.++.|+|..|....++.|+++|.
T Consensus 57 ~~~~~~~~~A~~~~~~al~~~p~ 79 (126)
T 4gco_A 57 LTKLMEFQRALDDCDTCIRLDSK 79 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHhhccHHHHHHHHHHHHHhhhh
Confidence 35666777777777777766665
No 83
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=45.00 E-value=44 Score=22.34 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=13.5
Q ss_pred HHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 50 LFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 50 ~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
..++.|+|..|...-++.+++.|.
T Consensus 124 ~~~~~g~~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 124 DAFMQANYAQAIELWQKVMDLNSP 147 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCT
T ss_pred HHHHcccHHHHHHHHHHHHhhCCC
Confidence 344555666666666666665554
No 84
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.94 E-value=11 Score=20.31 Aligned_cols=18 Identities=22% Similarity=0.514 Sum_probs=13.5
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2eq1_A 6 SGTGEKPYKCNECGKAFR 23 (46)
T ss_dssp CCCCSCCCCCTTTTCCCS
T ss_pred ccCCCCCeECCcCChhhC
Confidence 345677788999998774
No 85
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.92 E-value=12 Score=20.25 Aligned_cols=18 Identities=22% Similarity=0.599 Sum_probs=12.5
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|....+|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2em7_A 6 SGTGEKPYKCEECGKGFI 23 (46)
T ss_dssp SSSCCCSEECSSSCCEES
T ss_pred CCCCCcCccCCCccchhC
Confidence 345666778888887764
No 86
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=44.82 E-value=46 Score=23.15 Aligned_cols=41 Identities=10% Similarity=-0.100 Sum_probs=31.0
Q ss_pred cCCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCCh
Q psy2686 33 SKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSM 74 (139)
Q Consensus 33 c~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~ 74 (139)
.++.|.|...-...|+ ..++.|+|..|...-+++++++|..
T Consensus 29 l~l~p~~~~~~~~lg~-~~~~~g~~~eA~~~~~~al~~~P~~ 69 (151)
T 3gyz_A 29 NAIPDDMMDDIYSYAY-DFYNKGRIEEAEVFFRFLCIYDFYN 69 (151)
T ss_dssp CCSCHHHHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hCCCHHHHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4566777666556664 4478899999999999999998863
No 87
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=44.82 E-value=50 Score=21.58 Aligned_cols=39 Identities=8% Similarity=-0.048 Sum_probs=22.8
Q ss_pred CCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 34 KLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 34 ~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
++.|.+...-+..|+ ..++.|+|..|..+.+++++++|.
T Consensus 12 ~~~p~~~~~~~~~a~-~~~~~g~~~~A~~~~~~al~~~p~ 50 (142)
T 2xcb_A 12 GLSEDTLEQLYALGF-NQYQAGKWDDAQKIFQALCMLDHY 50 (142)
T ss_dssp TCCHHHHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHH-HHHHHccHHHHHHHHHHHHHhCCc
Confidence 344544444444443 335667777777777777777665
No 88
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.70 E-value=11 Score=19.92 Aligned_cols=17 Identities=24% Similarity=0.548 Sum_probs=13.0
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (44)
T 2en7_A 7 GTGMKPYVCNECGKAFR 23 (44)
T ss_dssp SSSSSSSCCTTTCCCCS
T ss_pred CCCCcCeECCCCCCccC
Confidence 35667788999998765
No 89
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.61 E-value=11 Score=20.26 Aligned_cols=18 Identities=22% Similarity=0.527 Sum_probs=12.8
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2enc_A 6 SGSGEKPFKCEECGKGFY 23 (46)
T ss_dssp CCCCCCSEECSSSCCEES
T ss_pred CCCCCCCcCCCCCCCcCC
Confidence 345667778888887764
No 90
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...
Probab=44.54 E-value=6.7 Score=27.51 Aligned_cols=17 Identities=29% Similarity=0.831 Sum_probs=13.9
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+.+|. ..+||.||..|.
T Consensus 74 l~~g~-~~RC~eCG~~fk 90 (98)
T 1v54_F 74 LHKGE-AQRCPSCGTHYK 90 (98)
T ss_dssp EESSS-CEECTTTCCEEE
T ss_pred EeCCC-ceECCCCCeEEE
Confidence 35787 779999999886
No 91
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.49 E-value=10 Score=19.98 Aligned_cols=17 Identities=29% Similarity=0.727 Sum_probs=13.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|+....|+.||..|.
T Consensus 6 H~~~k~~~C~~C~k~f~ 22 (42)
T 2en2_A 6 SGGEKPYKCETCGARFV 22 (42)
T ss_dssp CCSSCSEECTTTCCEES
T ss_pred cCCCCCEeCCCcChhhC
Confidence 35677789999998875
No 92
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.28 E-value=13 Score=20.15 Aligned_cols=18 Identities=22% Similarity=0.425 Sum_probs=13.8
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+..|+...+|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2emz_A 6 SGSGERPFKCNECGKGFG 23 (46)
T ss_dssp CSSCCCSCCCSSSCCCCS
T ss_pred CCCCCCCeECCCCCcccC
Confidence 345777789999998775
No 93
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=43.89 E-value=9.7 Score=24.38 Aligned_cols=17 Identities=24% Similarity=0.726 Sum_probs=13.9
Q ss_pred CccccccCCCccccCCC
Q psy2686 119 RESEACVYCGASYLPKY 135 (139)
Q Consensus 119 ~~~v~Cp~cga~y~p~~ 135 (139)
.|...|.+||-+|...+
T Consensus 11 ~P~~eC~lC~vkYs~r~ 27 (55)
T 2yrk_A 11 GTKPECTLCGVKYSARL 27 (55)
T ss_dssp CCCSCCTTTTCCCCSSS
T ss_pred CCCccccccCccccccc
Confidence 46679999999998765
No 94
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.82 E-value=12 Score=20.09 Aligned_cols=18 Identities=22% Similarity=0.615 Sum_probs=13.9
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|+....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~F~ 23 (44)
T 2epv_A 6 SGSGEKPYECNECGKAFI 23 (44)
T ss_dssp CCCCCCSEECSSSCCEES
T ss_pred ccCCCcCeECCCCCcccC
Confidence 345777789999998875
No 95
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.78 E-value=13 Score=19.89 Aligned_cols=17 Identities=29% Similarity=0.675 Sum_probs=12.2
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~~~~~C~~C~k~f~ 23 (46)
T 2eop_A 7 GTGEKPHECRECGKSFS 23 (46)
T ss_dssp CCCCCSCBCTTTCCBCS
T ss_pred cCCCCCeeCCCCCchhC
Confidence 35666778888887764
No 96
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.71 E-value=14 Score=19.84 Aligned_cols=16 Identities=31% Similarity=0.762 Sum_probs=11.5
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 8 ~~~~~~~C~~C~k~f~ 23 (46)
T 2eov_A 8 TGEKPYKCSDCGKSFT 23 (46)
T ss_dssp SSCCSCBCSSSCCBCS
T ss_pred CCCCCccCCccChhhC
Confidence 4566678888887764
No 97
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.45 E-value=14 Score=20.06 Aligned_cols=17 Identities=24% Similarity=0.624 Sum_probs=13.1
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2eon_A 7 GTGEKPYKCQVCGKAFR 23 (46)
T ss_dssp CSSCCSCBCSSSCCBCS
T ss_pred CCCCcccCCCCCCcccC
Confidence 35677788999998875
No 98
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.30 E-value=12 Score=20.23 Aligned_cols=18 Identities=33% Similarity=0.658 Sum_probs=13.2
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|....+|+.||..|.
T Consensus 6 ~h~~~k~~~C~~C~k~f~ 23 (46)
T 2em8_A 6 SGSGEKPYKCVECGKGYK 23 (46)
T ss_dssp CCCSCCSEECSSSCCEES
T ss_pred CCCCCCCeECcccCchhC
Confidence 345677788999988764
No 99
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.24 E-value=14 Score=19.95 Aligned_cols=17 Identities=24% Similarity=0.556 Sum_probs=13.1
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2yti_A 7 GTGEKPYKCNECGKVFT 23 (46)
T ss_dssp CSCCCTTCCSSSCCCCS
T ss_pred CCCCcCeECCCCCcccC
Confidence 45677788999998764
No 100
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.12 E-value=10 Score=20.37 Aligned_cols=18 Identities=28% Similarity=0.619 Sum_probs=14.0
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2yts_A 6 SGTGEKPYICNECGKSFI 23 (46)
T ss_dssp CCCSCCSEECSSSCCEES
T ss_pred CCCCCcCEECCCCChhhC
Confidence 345677789999998875
No 101
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.12 E-value=12 Score=20.11 Aligned_cols=17 Identities=24% Similarity=0.643 Sum_probs=12.2
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
..|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2eml_A 7 GTGEKPYECSVCGKAFS 23 (46)
T ss_dssp CSSCCSEECSSSCCEES
T ss_pred cCCCCCeeCCCcCCccC
Confidence 35666778888887764
No 102
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=42.92 E-value=3.8 Score=32.28 Aligned_cols=52 Identities=15% Similarity=0.317 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHHHHhhcCCCCceeecCCCCCCeeeecccccccc--------CCCccccccCCCcccc
Q psy2686 73 SMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIY--------HGRESEACVYCGASYL 132 (139)
Q Consensus 73 ~~~~~~qArkil~~~e~~~~da~~i~yD~~~~F~iC~~s~tPIy--------~g~~~v~Cp~cga~y~ 132 (139)
+++....=.+|.... +|.-.+.|.=+ .|++-|.-|. +|...+.||+||.-..
T Consensus 174 ~~~lL~~Yerir~~~--~g~avv~v~~~------~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL~ 233 (256)
T 3na7_A 174 EPKIYSFYERIRRWA--KNTSIVTIKKQ------ACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILY 233 (256)
T ss_dssp CHHHHHHHHHHHHHH--GGGSEEECBTT------BCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEEE
T ss_pred CHHHHHHHHHHHHhC--CCceEEEeeCC------ccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeEE
Confidence 345555555555432 45556666432 7887776553 5888999999998543
No 103
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.88 E-value=12 Score=20.18 Aligned_cols=18 Identities=11% Similarity=0.231 Sum_probs=13.5
Q ss_pred cCCCccccccCCCccccC
Q psy2686 116 YHGRESEACVYCGASYLP 133 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~p 133 (139)
-.|+....|+.||..|.-
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eoy_A 7 GQKEKCFKCNKCEKTFSC 24 (46)
T ss_dssp CCCSCCEECSSSCCEESS
T ss_pred cCCCCCEECcCCCCcCCC
Confidence 356677889999988753
No 104
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.61 E-value=11 Score=20.34 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=14.5
Q ss_pred ccCCCccccccCCCccccC
Q psy2686 115 IYHGRESEACVYCGASYLP 133 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~p 133 (139)
+-.|+....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~F~~ 24 (46)
T 2en3_A 6 SGTGEKPFQCKECGMNFSW 24 (46)
T ss_dssp CSCCCCSEECSSSCCEESS
T ss_pred ccCCCCCeeCcccChhhCC
Confidence 3456777899999998754
No 105
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.53 E-value=13 Score=19.93 Aligned_cols=17 Identities=24% Similarity=0.581 Sum_probs=12.0
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2ytr_A 7 GTGEKPYKCNECGKAFS 23 (46)
T ss_dssp CSSCCTTCCTTTCCCCS
T ss_pred CCCCcCcCCCCCCCccC
Confidence 35666778888887764
No 106
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.48 E-value=13 Score=19.93 Aligned_cols=17 Identities=24% Similarity=0.573 Sum_probs=13.1
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~~~~~C~~C~k~f~ 23 (46)
T 2yrj_A 7 GTGEKPYRCGECGKAFA 23 (46)
T ss_dssp CCCCCCEECSSSCCEES
T ss_pred CCCCCCeECCCCCCccC
Confidence 35677788999998875
No 107
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.44 E-value=11 Score=20.28 Aligned_cols=17 Identities=24% Similarity=0.579 Sum_probs=13.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2eow_A 7 GTGEKPYKCNECGKAFR 23 (46)
T ss_dssp SCCCCCEECTTSCCEES
T ss_pred CCCCCCeeccccCChhc
Confidence 35677789999998875
No 108
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.20 E-value=15 Score=19.80 Aligned_cols=17 Identities=24% Similarity=0.555 Sum_probs=13.0
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2em6_A 7 GMGEKCYKCDVCGKEFS 23 (46)
T ss_dssp CCCCCCCBCSSSCCBCS
T ss_pred cCCCCCeECCCCCcccC
Confidence 45677788999998774
No 109
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.19 E-value=13 Score=19.97 Aligned_cols=18 Identities=22% Similarity=0.613 Sum_probs=13.7
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~~~~~C~~C~k~f~ 23 (46)
T 2eor_A 6 SGTGEKPYNCEECGKAFI 23 (46)
T ss_dssp SSSCCCSEECTTTCCEES
T ss_pred CcCCCcCccCCCCCCCcC
Confidence 345677788999998875
No 110
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=42.08 E-value=8.5 Score=21.64 Aligned_cols=12 Identities=42% Similarity=1.140 Sum_probs=5.4
Q ss_pred ccccccCCCccc
Q psy2686 120 ESEACVYCGASY 131 (139)
Q Consensus 120 ~~v~Cp~cga~y 131 (139)
...+|+.||..|
T Consensus 3 ~~~~C~~C~~~f 14 (57)
T 3uk3_C 3 SSRECSYCGKFF 14 (57)
T ss_dssp --CBCTTTCCBC
T ss_pred CCccCCCCcchh
Confidence 344555555554
No 111
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=42.03 E-value=13 Score=19.90 Aligned_cols=17 Identities=29% Similarity=0.612 Sum_probs=11.9
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2em9_A 7 GTGEKPYNCKECGKSFR 23 (46)
T ss_dssp CCCCCSEECSSSCCEES
T ss_pred CCCCcCeECCccccccC
Confidence 34666678888887764
No 112
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=41.73 E-value=9.7 Score=19.88 Aligned_cols=15 Identities=20% Similarity=0.589 Sum_probs=11.7
Q ss_pred CCccccccCCCcccc
Q psy2686 118 GRESEACVYCGASYL 132 (139)
Q Consensus 118 g~~~v~Cp~cga~y~ 132 (139)
|....+|+.||..+.
T Consensus 3 ~~k~~~C~~C~k~f~ 17 (39)
T 1njq_A 3 PPRSYTCSFCKREFR 17 (39)
T ss_dssp CSSSEECTTTCCEES
T ss_pred CCCceECCCCCcccC
Confidence 455678999998875
No 113
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.48 E-value=13 Score=19.96 Aligned_cols=18 Identities=22% Similarity=0.565 Sum_probs=13.2
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+..|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~f~ 23 (46)
T 2ytj_A 6 SGTGEKPYICAECGKAFT 23 (46)
T ss_dssp TTSSCCSEECSSSCCEES
T ss_pred CCCCCcCeECCCCChhhC
Confidence 345667788999998764
No 114
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.45 E-value=13 Score=20.07 Aligned_cols=17 Identities=24% Similarity=0.559 Sum_probs=13.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2yth_A 7 GSGEKPFQCEECGKRFT 23 (46)
T ss_dssp CCCSSSBCCSSSCCCBS
T ss_pred CCCCcCCCCCCCCcccC
Confidence 45677789999998875
No 115
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.37 E-value=14 Score=19.96 Aligned_cols=18 Identities=22% Similarity=0.536 Sum_probs=13.5
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+..|....+|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~F~ 23 (46)
T 2ytp_A 6 SGTGERHYECSECGKAFA 23 (46)
T ss_dssp SSCCCCCEECSSSCCEES
T ss_pred CcCCCCCeECCcCCcccC
Confidence 345677788999998764
No 116
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=41.15 E-value=67 Score=23.02 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=30.3
Q ss_pred hhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q psy2686 54 LKNYKTTASFAHRLLELGPSMEVATQARKLLAICN 88 (139)
Q Consensus 54 ~kN~~tAa~fArRLLel~p~~~~~~qArkil~~~e 88 (139)
.|+|..|...-+++++..|....+.+|+..+..+.
T Consensus 208 ~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~ 242 (261)
T 3qky_A 208 PERYRRAVELYERLLQIFPDSPLLRTAEELYTRAR 242 (261)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHH
Confidence 49999999999999999999888888888776654
No 117
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.10 E-value=16 Score=19.64 Aligned_cols=17 Identities=24% Similarity=0.600 Sum_probs=12.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2ytn_A 7 GTGKKPYKCNECGKVFT 23 (46)
T ss_dssp CSCCSSCBCTTTCCBCS
T ss_pred CCCCcCeECCCCCCeeC
Confidence 35667778888888764
No 118
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.09 E-value=14 Score=19.91 Aligned_cols=17 Identities=24% Similarity=0.647 Sum_probs=12.7
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2emh_A 7 GTGERPYICTVCGKAFT 23 (46)
T ss_dssp CSCCCSEECTTTCCEES
T ss_pred CCCCCCcCCCCCCchhC
Confidence 45667788999988764
No 119
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=41.01 E-value=9.9 Score=17.90 Aligned_cols=12 Identities=42% Similarity=1.016 Sum_probs=9.4
Q ss_pred cccccCCCcccc
Q psy2686 121 SEACVYCGASYL 132 (139)
Q Consensus 121 ~v~Cp~cga~y~ 132 (139)
...|+.||..|.
T Consensus 3 ~~~C~~C~~~f~ 14 (30)
T 2m0d_A 3 PYQCDYCGRSFS 14 (30)
T ss_dssp CEECTTTCCEES
T ss_pred CccCCCCCcccC
Confidence 357999998875
No 120
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=40.97 E-value=27 Score=22.98 Aligned_cols=22 Identities=9% Similarity=-0.121 Sum_probs=11.7
Q ss_pred HhhhcHHHHHHHHHHHHhcCCC
Q psy2686 52 FKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 52 ~K~kN~~tAa~fArRLLel~p~ 73 (139)
++.|+|..|....++.++++|.
T Consensus 63 ~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 63 QSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHhhHHHHHHHHHHHHhcCCC
Confidence 4455555555555555555443
No 121
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.95 E-value=14 Score=19.77 Aligned_cols=17 Identities=18% Similarity=0.423 Sum_probs=13.0
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2ytf_A 7 GTGEKPFECSECQKAFN 23 (46)
T ss_dssp SCCCCSEECSSSCCEES
T ss_pred CCCCCCcCCCCCCcccC
Confidence 35677788999998774
No 122
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.92 E-value=11 Score=20.37 Aligned_cols=17 Identities=24% Similarity=0.718 Sum_probs=13.2
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2eoz_A 7 GTGEKPYSCNVCGKAFV 23 (46)
T ss_dssp CSSCCSEEETTTTEEES
T ss_pred CCCCCCeECcccChhhC
Confidence 45677788999998875
No 123
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.83 E-value=14 Score=19.93 Aligned_cols=17 Identities=35% Similarity=0.593 Sum_probs=12.1
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~~~~~C~~C~k~f~ 23 (46)
T 2ytg_A 7 GTGEKPFKCGECGKSYN 23 (46)
T ss_dssp CSSCCSEECTTTCCEES
T ss_pred CCCCCCeECCCCCcccC
Confidence 34666678888887765
No 124
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=40.81 E-value=16 Score=19.73 Aligned_cols=17 Identities=24% Similarity=0.599 Sum_probs=12.2
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2emk_A 7 GTGEKPYECKECGKAFS 23 (46)
T ss_dssp CSSSCSCBCSSSCCBCS
T ss_pred cCCCCceECCCCCchhC
Confidence 34666678888888764
No 125
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.47 E-value=12 Score=20.23 Aligned_cols=17 Identities=24% Similarity=0.618 Sum_probs=13.4
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2yto_A 7 GTGEKPYKCSDCGKAFT 23 (46)
T ss_dssp CCSCCCEECSSSCCEES
T ss_pred cCCCCCEECcccCCccC
Confidence 35677789999998875
No 126
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=40.42 E-value=16 Score=19.67 Aligned_cols=17 Identities=18% Similarity=0.403 Sum_probs=11.4
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2em0_A 7 GMGEKTWKCRECDMCFS 23 (46)
T ss_dssp SCCCCCCCCSSSCCCCS
T ss_pred cCCCcCeECCCCCcccC
Confidence 34566677888887664
No 127
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=40.41 E-value=11 Score=17.83 Aligned_cols=13 Identities=23% Similarity=0.677 Sum_probs=9.8
Q ss_pred cccccCCCccccC
Q psy2686 121 SEACVYCGASYLP 133 (139)
Q Consensus 121 ~v~Cp~cga~y~p 133 (139)
...|+.||..|..
T Consensus 3 ~~~C~~C~k~f~~ 15 (28)
T 2kvf_A 3 PYSCSVCGKRFSL 15 (28)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCCCcccCC
Confidence 3579999988753
No 128
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.30 E-value=15 Score=19.77 Aligned_cols=18 Identities=17% Similarity=0.361 Sum_probs=13.4
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|....+|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~F~ 23 (46)
T 2en9_A 6 SGAGKKLFKCNECKKTFT 23 (46)
T ss_dssp SCCSSCCCBCTTTCCBCS
T ss_pred CCCCCCCEECCccCcccC
Confidence 345677788999998775
No 129
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=40.24 E-value=15 Score=19.74 Aligned_cols=17 Identities=18% Similarity=0.483 Sum_probs=11.9
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2el4_A 7 GTGVKPYGCSQCAKTFS 23 (46)
T ss_dssp SCCCCSEECSSSSCEES
T ss_pred CCCCCceECCCCCchhC
Confidence 34666678888887764
No 130
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.16 E-value=15 Score=19.81 Aligned_cols=18 Identities=22% Similarity=0.473 Sum_probs=13.0
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~k~~~C~~C~k~F~ 23 (46)
T 2eoo_A 6 SGSGERPYGCNECGKNFG 23 (46)
T ss_dssp CCSCCCCEECSSSCCEES
T ss_pred CCCCCCCEEccccCcccC
Confidence 345667778888888764
No 131
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.06 E-value=15 Score=19.79 Aligned_cols=18 Identities=22% Similarity=0.505 Sum_probs=12.4
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+-.|.....|+.||..|.
T Consensus 6 ~H~~~~~~~C~~C~k~f~ 23 (46)
T 2yso_A 6 SGSREKSHQCRECGEIFF 23 (46)
T ss_dssp CSSCCCCEECTTTCCEES
T ss_pred ccCCCCCEEccccChhhC
Confidence 345666678888887764
No 132
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.98 E-value=15 Score=19.72 Aligned_cols=17 Identities=24% Similarity=0.638 Sum_probs=12.9
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2ep3_A 7 GTGEKPYRCAECGKAFT 23 (46)
T ss_dssp SSCCCSEECSSSCCEES
T ss_pred CCCCCCeECCCCCchhC
Confidence 35677788999998765
No 133
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.95 E-value=11 Score=20.35 Aligned_cols=17 Identities=24% Similarity=0.608 Sum_probs=13.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2eq3_A 7 GTGEKPYECNQCGKAFS 23 (46)
T ss_dssp SCCCCSSEETTTTEECS
T ss_pred CCCCCCeECCCCChhhC
Confidence 45677789999998875
No 134
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=39.73 E-value=12 Score=24.59 Aligned_cols=8 Identities=25% Similarity=0.783 Sum_probs=7.0
Q ss_pred cccCCCcc
Q psy2686 123 ACVYCGAS 130 (139)
Q Consensus 123 ~Cp~cga~ 130 (139)
.||.||+.
T Consensus 42 ~CP~Cga~ 49 (70)
T 1dx8_A 42 MCPACRSP 49 (70)
T ss_dssp BCTTTCCB
T ss_pred cCCCCCCC
Confidence 79999984
No 135
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.71 E-value=15 Score=19.64 Aligned_cols=18 Identities=22% Similarity=0.503 Sum_probs=12.4
Q ss_pred cCCCccccccCCCccccC
Q psy2686 116 YHGRESEACVYCGASYLP 133 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~p 133 (139)
-.|.....|+.||..|.-
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2epw_A 7 GTGEKPCKCTECGKAFCW 24 (46)
T ss_dssp CCCCCSEECSSSCCEESS
T ss_pred CCCCCCeeCCCCCCccCC
Confidence 346666788888877653
No 136
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=39.57 E-value=56 Score=21.29 Aligned_cols=25 Identities=28% Similarity=0.501 Sum_probs=14.8
Q ss_pred HHHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 49 NLFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 49 ~~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
+..|+.|+|..|...=++-|++.|.
T Consensus 16 ~~~~~~~~~~~A~~~y~~Al~~~p~ 40 (127)
T 4gcn_A 16 NAAYKQKDFEKAHVHYDKAIELDPS 40 (127)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 4455666666666666666666554
No 137
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.23 E-value=16 Score=19.69 Aligned_cols=18 Identities=17% Similarity=0.492 Sum_probs=13.4
Q ss_pred cCCCccccccCCCccccC
Q psy2686 116 YHGRESEACVYCGASYLP 133 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~p 133 (139)
-.|.....|+.||..|..
T Consensus 7 H~~~~~~~C~~C~k~F~~ 24 (46)
T 2em3_A 7 GTGEKPYECKVCSKAFTQ 24 (46)
T ss_dssp CSSCCSEECSSSCCEESS
T ss_pred CCCCcCeECCCCCcccCC
Confidence 356677889999988753
No 138
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.16 E-value=14 Score=19.90 Aligned_cols=17 Identities=29% Similarity=0.643 Sum_probs=13.4
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 h~~~k~~~C~~C~k~f~ 23 (46)
T 2ytt_A 7 GEGEKPYQCSECGKSFS 23 (46)
T ss_dssp CSCCCTTCCSSSCCCCS
T ss_pred CCCCCCeeCCCCCcccC
Confidence 35677789999998875
No 139
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=39.11 E-value=11 Score=17.77 Aligned_cols=12 Identities=17% Similarity=0.517 Sum_probs=9.3
Q ss_pred ccccCCCccccC
Q psy2686 122 EACVYCGASYLP 133 (139)
Q Consensus 122 v~Cp~cga~y~p 133 (139)
..|+.||..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 1ard_A 3 FVCEVCTRAFAR 14 (29)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCcccCC
Confidence 479999988753
No 140
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=38.94 E-value=61 Score=19.26 Aligned_cols=24 Identities=25% Similarity=0.635 Sum_probs=15.0
Q ss_pred HHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 50 LFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 50 ~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
..++.++|..|..+.++.+++.|.
T Consensus 52 ~~~~~~~~~~A~~~~~~~~~~~~~ 75 (125)
T 1na0_A 52 AYYKQGDYDEAIEYYQKALELDPN 75 (125)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHhCCHHHHHHHHHHHHHhCCc
Confidence 345566666666666666666554
No 141
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.92 E-value=16 Score=19.61 Aligned_cols=17 Identities=29% Similarity=0.692 Sum_probs=12.0
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 H~~~~~~~C~~C~k~f~ 23 (46)
T 2en8_A 7 GSGEKSHTCDECGKNFC 23 (46)
T ss_dssp CCCCSSEECTTTCCEES
T ss_pred CCCCCCeECCCcCcccC
Confidence 34666678888887764
No 142
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=38.81 E-value=10 Score=17.69 Aligned_cols=12 Identities=17% Similarity=0.575 Sum_probs=9.4
Q ss_pred ccccCCCccccC
Q psy2686 122 EACVYCGASYLP 133 (139)
Q Consensus 122 v~Cp~cga~y~p 133 (139)
..|+.||..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 469999988754
No 143
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.79 E-value=14 Score=19.91 Aligned_cols=17 Identities=24% Similarity=0.557 Sum_probs=13.4
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2eq2_A 7 GTGGKPYQCNECGKAFS 23 (46)
T ss_dssp SSSSCSSSCCSSCCCCS
T ss_pred cCCCCCeECCCCCcccC
Confidence 35677789999998875
No 144
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=38.74 E-value=16 Score=22.91 Aligned_cols=24 Identities=13% Similarity=0.162 Sum_probs=18.3
Q ss_pred HHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 50 LFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 50 ~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
..++.|+|..|...-++.|++.|.
T Consensus 50 ~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 50 LYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhhhc
Confidence 446788888888888888887654
No 145
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.44 E-value=13 Score=20.01 Aligned_cols=17 Identities=29% Similarity=0.659 Sum_probs=13.2
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
..|.....|+.||..|.
T Consensus 7 h~~~k~~~C~~C~k~F~ 23 (45)
T 2epu_A 7 GTGQKPFECTHCGKSFR 23 (45)
T ss_dssp CCSCCSEEETTTTEEES
T ss_pred CCCCcCccCCCCCCccC
Confidence 45677788999998775
No 146
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=38.31 E-value=16 Score=19.64 Aligned_cols=17 Identities=24% Similarity=0.528 Sum_probs=12.7
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
..|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2ema_A 7 GTGEKRYKCNECGKVFS 23 (46)
T ss_dssp CTTSCCEECSSSCCEES
T ss_pred CCCCcCcCCCCCcchhC
Confidence 45667778999988764
No 147
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.22 E-value=17 Score=19.54 Aligned_cols=17 Identities=29% Similarity=0.688 Sum_probs=12.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2ep2_A 7 GTGEKPYECSICGKSFT 23 (46)
T ss_dssp SSCCCSEECSSSCCEES
T ss_pred CCCCcCcCCCCCCcccC
Confidence 35667778999988764
No 148
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.21 E-value=13 Score=20.07 Aligned_cols=18 Identities=22% Similarity=0.541 Sum_probs=12.6
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+..|....+|+.||..|.
T Consensus 6 ~H~~~~~~~C~~C~k~f~ 23 (46)
T 2en6_A 6 SGSGEKPYGCNECGKTFS 23 (46)
T ss_dssp CCCSSCCEEETTTTEEES
T ss_pred ccCCCcCeECCCCCcccC
Confidence 345666778888887764
No 149
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.18 E-value=12 Score=20.05 Aligned_cols=18 Identities=22% Similarity=0.451 Sum_probs=14.0
Q ss_pred cCCCccccccCCCccccC
Q psy2686 116 YHGRESEACVYCGASYLP 133 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~p 133 (139)
-.|+....|+.||..|..
T Consensus 7 H~~~~~~~C~~C~k~F~~ 24 (44)
T 2eox_A 7 GTDSKSYNCNECGKAFTR 24 (44)
T ss_dssp CCCCCCEEETTTTEEESS
T ss_pred CCCCCCeECcccCcccCC
Confidence 456777899999988754
No 150
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=38.18 E-value=16 Score=19.67 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=12.1
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 h~~~k~~~C~~C~k~f~ 23 (46)
T 2el6_A 7 GAGVNPYKCSQCEKSFS 23 (46)
T ss_dssp SCCCCSEECSSSSCEES
T ss_pred CCCCCCeECCCCCcccC
Confidence 34666778888887764
No 151
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=38.10 E-value=71 Score=22.43 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHhcCCChHHH
Q psy2686 44 LRTATNLFFKLKNYKTTASFAHRLLELGPSMEVA 77 (139)
Q Consensus 44 Lr~Am~~~~K~kN~~tAa~fArRLLel~p~~~~~ 77 (139)
+..--...++.|++..|..+.++.|++.|..+.+
T Consensus 224 ~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 257 (272)
T 3u4t_A 224 NEYIAYYYTINRDKVKADAAWKNILALDPTNKKA 257 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCccHHHH
Confidence 3333344567999999999999999999987653
No 152
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=38.10 E-value=12 Score=17.40 Aligned_cols=11 Identities=27% Similarity=0.736 Sum_probs=8.6
Q ss_pred ccccCCCcccc
Q psy2686 122 EACVYCGASYL 132 (139)
Q Consensus 122 v~Cp~cga~y~ 132 (139)
-+|+.||..|.
T Consensus 2 ~~C~~C~k~f~ 12 (27)
T 1znf_A 2 YKCGLCERSFV 12 (27)
T ss_dssp CBCSSSCCBCS
T ss_pred ccCCCCCCcCC
Confidence 36999998775
No 153
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=37.96 E-value=9.6 Score=18.20 Aligned_cols=11 Identities=27% Similarity=0.513 Sum_probs=8.9
Q ss_pred ccccCCCcccc
Q psy2686 122 EACVYCGASYL 132 (139)
Q Consensus 122 v~Cp~cga~y~ 132 (139)
-+|+.||..|.
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvg_A 4 YRCPLCRAGCP 14 (27)
T ss_dssp EEETTTTEEES
T ss_pred cCCCCCCcccC
Confidence 57999998775
No 154
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.83 E-value=17 Score=19.45 Aligned_cols=17 Identities=29% Similarity=0.739 Sum_probs=11.8
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2eme_A 7 GSGEKPYVCDYCGKAFG 23 (46)
T ss_dssp TCCCCSEECSSSCCEES
T ss_pred CCCCCCeECCCCChhhC
Confidence 34566678888887764
No 155
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.77 E-value=15 Score=19.78 Aligned_cols=17 Identities=29% Similarity=0.616 Sum_probs=13.2
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|+...+|+.||..|.
T Consensus 7 H~~~~~~~C~~C~k~f~ 23 (46)
T 2eoq_A 7 GTGEKPFKCDICGKSFC 23 (46)
T ss_dssp SSSSCSCCCSSSCCCCS
T ss_pred CCCCCCcCCCcCCchhC
Confidence 35677789999998875
No 156
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.62 E-value=17 Score=19.56 Aligned_cols=17 Identities=24% Similarity=0.557 Sum_probs=12.6
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~~~~~C~~C~k~f~ 23 (46)
T 2ytk_A 7 GSGEKPYKCNECGKVFT 23 (46)
T ss_dssp SSSSCSEECSSSCCEES
T ss_pred CCCCCCEeCCcCCCccC
Confidence 35667778999988764
No 157
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=36.93 E-value=15 Score=21.70 Aligned_cols=28 Identities=14% Similarity=0.434 Sum_probs=19.8
Q ss_pred eeecccccc------ccCCCccccccCCCccccC
Q psy2686 106 QICARSYTP------IYHGRESEACVYCGASYLP 133 (139)
Q Consensus 106 ~iC~~s~tP------Iy~g~~~v~Cp~cga~y~p 133 (139)
.+|..+|+- +-.|+...+|++||..+..
T Consensus 18 ~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~ 51 (62)
T 1vd4_A 18 PVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEE 51 (62)
T ss_dssp SSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEE
T ss_pred CCCCchhccHHHhHhhcCCCCCEECCCCCCcccc
Confidence 378888653 3357777889999988753
No 158
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=36.75 E-value=12 Score=21.21 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=14.1
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+..|.....|+.||..|.
T Consensus 18 ~H~~~k~~~C~~C~k~f~ 35 (54)
T 1yui_A 18 RSQSEQPATCPICYAVIR 35 (54)
T ss_dssp HHTSSCCEECTTTCCEES
T ss_pred hcCCCCCccCCCCCcccC
Confidence 345777789999998875
No 159
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.61 E-value=15 Score=19.54 Aligned_cols=16 Identities=19% Similarity=0.613 Sum_probs=13.0
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 6 ~~~k~~~C~~C~k~f~ 21 (44)
T 2emx_A 6 SGEKPFGCSCCEKAFS 21 (44)
T ss_dssp SSCCCEECSSSSCEES
T ss_pred CCCcCccCCCCCcccC
Confidence 5677789999998875
No 160
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.59 E-value=16 Score=19.67 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=14.1
Q ss_pred cCCCccccccCCCccccC
Q psy2686 116 YHGRESEACVYCGASYLP 133 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~p 133 (139)
-.|.....|+.||..|.-
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2yu8_A 7 GTGEKPYKCNECGKVFTQ 24 (46)
T ss_dssp CCCCSSEECSSSCCEESS
T ss_pred CCCCCCeECCcCCchhCC
Confidence 457778899999988753
No 161
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.40 E-value=15 Score=19.76 Aligned_cols=17 Identities=24% Similarity=0.587 Sum_probs=13.3
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2emy_A 7 GTGENPYECHECGKAFS 23 (46)
T ss_dssp CCSSCCEECSSSCCEES
T ss_pred CCCCcCcCCCCCCcccC
Confidence 35667789999998875
No 162
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.10 E-value=15 Score=19.70 Aligned_cols=17 Identities=24% Similarity=0.542 Sum_probs=13.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2eq0_A 7 GTGEKPYKCHECGKVFR 23 (46)
T ss_dssp TTCCCCEECTTTCCEES
T ss_pred CCCCCCeECCCCCchhC
Confidence 35677789999998875
No 163
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=36.05 E-value=19 Score=34.27 Aligned_cols=77 Identities=18% Similarity=0.314 Sum_probs=47.6
Q ss_pred Cccchhhhhhhh-----cc----CCchhhhHHHHHHHHhhhcC---Cchhh-HHHHHHHHHHHHHhhh--cHHHHHHHHH
Q psy2686 1 MGLQMETYRKEQ-----LK----SNESSQVRICELAAYFTHSK---LQPVH-QILTLRTATNLFFKLK--NYKTTASFAH 65 (139)
Q Consensus 1 ~gl~iEl~Rr~l-----~~----~~~~~~kR~lELaAYFT~c~---Lqp~H-~~LaLr~Am~~~~K~k--N~~tAa~fAr 65 (139)
+|+.||.+|-++ ++ ++.++.. ++-.|.+.|- .+|.. +.-.||++..+.-|.+ .|-++...|=
T Consensus 165 vdLalE~erLD~Le~~vd~~~~~~~~~n~~---rvclYlls~v~~lv~p~~fr~~vLr~l~~Iy~k~~~~dy~~a~~~ai 241 (963)
T 4ady_A 165 LGIALEGYRLDIIESALKSKLDQDSTSENV---KIINYLLTLAITTVTNSKFRSSILRKSFDFLMNMPNCDYLTLNKVVV 241 (963)
T ss_dssp HHHHHHTTCHHHHHHHHHHHCCC-CHHHHH---HHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHhhccccccccHH---HHHHHHHHHhhccCCChHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 478899988763 22 1112234 4555665543 35554 6889999999999988 7777766665
Q ss_pred HHHhcCCChHHHHHHHHHHHHh
Q psy2686 66 RLLELGPSMEVATQARKLLAIC 87 (139)
Q Consensus 66 RLLel~p~~~~~~qArkil~~~ 87 (139)
+| +.. +.+++|+..+
T Consensus 242 ~L---nD~----~li~~if~~l 256 (963)
T 4ady_A 242 NL---NDA----GLALQLFKKL 256 (963)
T ss_dssp HH---TCH----HHHHHHHHHH
T ss_pred Hc---CCH----HHHHHHHHHH
Confidence 54 322 3355566554
No 164
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.70 E-value=19 Score=19.39 Aligned_cols=16 Identities=25% Similarity=0.669 Sum_probs=11.3
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 8 ~~~~~~~C~~C~k~f~ 23 (46)
T 2em5_A 8 SSTKSHQCHECGRGFT 23 (46)
T ss_dssp CCSCSEECSSSCCEES
T ss_pred CCCCCeECCcCCCccC
Confidence 4566677888887764
No 165
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.66 E-value=19 Score=19.26 Aligned_cols=17 Identities=24% Similarity=0.610 Sum_probs=11.9
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2ytd_A 7 GSGEKPYKCSECGKAFH 23 (46)
T ss_dssp SCCCCSEECSSSCCEES
T ss_pred cCCCcCeECCCCCCeeC
Confidence 34666678888887764
No 166
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.44 E-value=11 Score=17.62 Aligned_cols=11 Identities=27% Similarity=0.767 Sum_probs=8.9
Q ss_pred ccccCCCcccc
Q psy2686 122 EACVYCGASYL 132 (139)
Q Consensus 122 v~Cp~cga~y~ 132 (139)
.+|+.||..|.
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2m0f_A 3 LKCRECGKQFT 13 (29)
T ss_dssp EECTTTSCEES
T ss_pred ccCCCCCCccC
Confidence 47999998775
No 167
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=35.30 E-value=65 Score=18.49 Aligned_cols=22 Identities=27% Similarity=0.634 Sum_probs=11.0
Q ss_pred HhhhcHHHHHHHHHHHHhcCCC
Q psy2686 52 FKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 52 ~K~kN~~tAa~fArRLLel~p~ 73 (139)
++.++|..|....++.+++.|.
T Consensus 54 ~~~~~~~~A~~~~~~a~~~~p~ 75 (91)
T 1na3_A 54 YKQGDYDEAIEYYQKALELDPN 75 (91)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHhhHHHHHHHHHHHHhcCCC
Confidence 3445555555555555555443
No 168
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=35.20 E-value=12 Score=17.52 Aligned_cols=12 Identities=25% Similarity=0.537 Sum_probs=9.4
Q ss_pred ccccCCCccccC
Q psy2686 122 EACVYCGASYLP 133 (139)
Q Consensus 122 v~Cp~cga~y~p 133 (139)
..|+.||..+..
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1klr_A 3 YQCQYCEFRSAD 14 (30)
T ss_dssp CCCSSSSCCCSC
T ss_pred ccCCCCCCccCC
Confidence 479999988753
No 169
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.19 E-value=19 Score=19.22 Aligned_cols=16 Identities=19% Similarity=0.465 Sum_probs=12.8
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|....+|+.||..|.
T Consensus 6 ~~~k~~~C~~C~k~f~ 21 (43)
T 2yrm_A 6 SGNGAFFCNECDCRFS 21 (43)
T ss_dssp SSSCCBCCSSSCCCBS
T ss_pred CCCCCEECCCCCCeeC
Confidence 4667789999998875
No 170
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.14 E-value=18 Score=19.55 Aligned_cols=17 Identities=35% Similarity=0.810 Sum_probs=13.3
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
..|....+|+.||..|.
T Consensus 7 h~~~k~~~C~~C~k~F~ 23 (46)
T 2eom_A 7 GHGERGHRCSDCGKFFL 23 (46)
T ss_dssp CCCCSSCCCSSSCCCCS
T ss_pred CCCCCCcCCCCCCCeeC
Confidence 35677789999998875
No 171
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=34.68 E-value=81 Score=19.42 Aligned_cols=26 Identities=12% Similarity=0.307 Sum_probs=22.5
Q ss_pred HHHHhhhcHHHHHHHHHHHHhcCCCh
Q psy2686 49 NLFFKLKNYKTTASFAHRLLELGPSM 74 (139)
Q Consensus 49 ~~~~K~kN~~tAa~fArRLLel~p~~ 74 (139)
...++.|+|..|....++++++.|..
T Consensus 47 ~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 47 ESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 35678999999999999999998864
No 172
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.63 E-value=21 Score=19.13 Aligned_cols=17 Identities=24% Similarity=0.528 Sum_probs=12.2
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|.....|+.||..|.
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2emp_A 7 GTGVKPYMCNECGKAFS 23 (46)
T ss_dssp SSCCCSEECSSSCCEES
T ss_pred cCCCcCeECCCCCchhC
Confidence 35666778888887764
No 173
>2y69_F Cytochrome C oxidase subunit 5B; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=34.24 E-value=12 Score=27.58 Aligned_cols=17 Identities=29% Similarity=0.831 Sum_probs=13.8
Q ss_pred ccCCCccccccCCCcccc
Q psy2686 115 IYHGRESEACVYCGASYL 132 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~ 132 (139)
+.+|. ..+||.||..|.
T Consensus 105 L~kg~-p~RCpeCG~~fk 121 (129)
T 2y69_F 105 LHKGE-AQRCPSCGTHYK 121 (129)
T ss_dssp EESSS-CEECTTTCCEEE
T ss_pred EeCCC-ceeCCCCCeEEE
Confidence 35787 589999999886
No 174
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.17 E-value=21 Score=19.00 Aligned_cols=16 Identities=31% Similarity=0.872 Sum_probs=11.6
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|+....|+.||..|.
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2emm_A 8 TGERPHKCNECGKSFI 23 (46)
T ss_dssp SCCCSEECSSSCCEES
T ss_pred CCCCCeeCCCCChhhC
Confidence 4666678888887764
No 175
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=34.14 E-value=12 Score=17.57 Aligned_cols=12 Identities=25% Similarity=0.606 Sum_probs=9.3
Q ss_pred ccccCCCccccC
Q psy2686 122 EACVYCGASYLP 133 (139)
Q Consensus 122 v~Cp~cga~y~p 133 (139)
..|+.||..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 479999988753
No 176
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.71 E-value=18 Score=19.43 Aligned_cols=17 Identities=24% Similarity=0.555 Sum_probs=11.9
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
..|.....|+.||..|.
T Consensus 7 H~~~~~~~C~~C~k~f~ 23 (46)
T 2en1_A 7 GSGEKPFKCEECGKRFT 23 (46)
T ss_dssp CCCCCSEEETTTTEEES
T ss_pred CCCCCCeeCCCCCcccC
Confidence 35666678888887764
No 177
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=39.31 E-value=9.1 Score=17.89 Aligned_cols=12 Identities=25% Similarity=0.816 Sum_probs=9.2
Q ss_pred ccccCCCccccC
Q psy2686 122 EACVYCGASYLP 133 (139)
Q Consensus 122 v~Cp~cga~y~p 133 (139)
-.|+.||..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (26)
T 2lvu_A 3 YVCERCGKRFVQ 14 (26)
Confidence 479999988753
No 178
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=32.82 E-value=25 Score=19.87 Aligned_cols=19 Identities=5% Similarity=0.064 Sum_probs=14.2
Q ss_pred ccCCCccccccCCCccccC
Q psy2686 115 IYHGRESEACVYCGASYLP 133 (139)
Q Consensus 115 Iy~g~~~v~Cp~cga~y~p 133 (139)
+..|....+|+.||..|..
T Consensus 35 ~H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 35 VHTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp TSCCCCCCCSSSSCCSSCC
T ss_pred hcCCCCCccCCCCCCCCCC
Confidence 4457777889999987753
No 179
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.73 E-value=91 Score=19.41 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=11.7
Q ss_pred HHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 51 FFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 51 ~~K~kN~~tAa~fArRLLel~p~ 73 (139)
.++.++|..|....++.+++.|.
T Consensus 75 ~~~~~~~~~A~~~~~~~~~~~~~ 97 (148)
T 2dba_A 75 HLKLEDYDKAETEASKAIEKDGG 97 (148)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTSC
T ss_pred HHHHccHHHHHHHHHHHHhhCcc
Confidence 34455555555555555555443
No 180
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=32.49 E-value=17 Score=21.02 Aligned_cols=16 Identities=13% Similarity=0.449 Sum_probs=12.9
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 36 ~~~~~~~C~~C~k~f~ 51 (66)
T 2drp_A 36 RNVKVYPCPFCFKEFT 51 (66)
T ss_dssp SSCCCEECTTTCCEES
T ss_pred CCCcCeECCCCCCccC
Confidence 3677789999998875
No 181
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=32.25 E-value=16 Score=17.31 Aligned_cols=11 Identities=27% Similarity=0.730 Sum_probs=8.8
Q ss_pred ccccCCCcccc
Q psy2686 122 EACVYCGASYL 132 (139)
Q Consensus 122 v~Cp~cga~y~ 132 (139)
..|+.||..+.
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1paa_A 3 YACGLCNRAFT 13 (30)
T ss_dssp SBCTTTCCBCS
T ss_pred cCCcccCcccC
Confidence 47999998775
No 182
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=31.59 E-value=64 Score=25.85 Aligned_cols=49 Identities=20% Similarity=0.320 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHh-----hhcHHHHHHHHHHHHhcCCChHH-----------HHHHHHHHHHhhcC
Q psy2686 42 LTLRTATNLFFK-----LKNYKTTASFAHRLLELGPSMEV-----------ATQARKLLAICNAN 90 (139)
Q Consensus 42 LaLr~Am~~~~K-----~kN~~tAa~fArRLLel~p~~~~-----------~~qArkil~~~e~~ 90 (139)
-.|+.||+.-|. ..-.+.-+.++++||++-|..++ .+++++|++-|++.
T Consensus 160 ~~lKEa~~~~f~Al~E~aEK~~ila~~gk~Ll~lldd~pv~PG~~r~~Y~g~~~t~qi~~dAe~~ 224 (234)
T 3plt_A 160 EKLKAAYSYMFDSLRELSEKFALIAGYGKALLELLDDSPVTPGEARPAYDGYEASRQIIMDAESA 224 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCSSSCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 356666666554 34566778999999998543222 57899999988763
No 183
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.43 E-value=20 Score=19.10 Aligned_cols=17 Identities=24% Similarity=0.556 Sum_probs=11.4
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 H~~~~~~~C~~C~k~F~ 23 (46)
T 2eoe_A 7 GTGEKPYKCNECGKVFT 23 (46)
T ss_dssp CCCCCSSEETTTTEECS
T ss_pred CCCCCCeECCCcChhhC
Confidence 34566677888887664
No 184
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=31.29 E-value=84 Score=22.22 Aligned_cols=29 Identities=14% Similarity=0.292 Sum_probs=24.2
Q ss_pred HHHHHhhhcHHHHHHHHHHHHhcCCChHH
Q psy2686 48 TNLFFKLKNYKTTASFAHRLLELGPSMEV 76 (139)
Q Consensus 48 m~~~~K~kN~~tAa~fArRLLel~p~~~~ 76 (139)
-...++.|+|..|...-+++|++.|....
T Consensus 48 g~~~~~~~~~~~A~~~~~~~l~~~P~~~~ 76 (225)
T 2yhc_A 48 IYAYYKNADLPLAQAAIDRFIRLNPTHPN 76 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHCcCCCc
Confidence 35568999999999999999999887543
No 185
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=30.95 E-value=87 Score=20.33 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=25.5
Q ss_pred HHHhhhcHHHHHHHHHHHHhcCCChHHHHHH
Q psy2686 50 LFFKLKNYKTTASFAHRLLELGPSMEVATQA 80 (139)
Q Consensus 50 ~~~K~kN~~tAa~fArRLLel~p~~~~~~qA 80 (139)
...+.|+|..|...-++-|++.|++++..+-
T Consensus 92 ~~~~~~~~~~A~~~~~kal~~~~~~~~~~~l 122 (127)
T 4gcn_A 92 AFQKQNDLSLAVQWFHRSLSEFRDPELVKKV 122 (127)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCcCHHHHHHH
Confidence 3467899999999999999999998875443
No 186
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=30.88 E-value=18 Score=20.18 Aligned_cols=17 Identities=24% Similarity=0.530 Sum_probs=13.5
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
..|.....|+.||..|.
T Consensus 24 h~~~~~~~C~~C~~~f~ 40 (57)
T 1bbo_A 24 HTDVRPYHCTYCNFSFK 40 (57)
T ss_dssp TSSCCCEECSSSSCEES
T ss_pred cCCCCCccCCCCCchhc
Confidence 35677789999998875
No 187
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=36.88 E-value=11 Score=17.95 Aligned_cols=11 Identities=18% Similarity=0.721 Sum_probs=8.9
Q ss_pred ccccCCCcccc
Q psy2686 122 EACVYCGASYL 132 (139)
Q Consensus 122 v~Cp~cga~y~ 132 (139)
..|+.||..|.
T Consensus 4 ~~C~~C~k~f~ 14 (30)
T 2lvr_A 4 YVCIHCQRQFA 14 (30)
Confidence 47999998775
No 188
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=30.63 E-value=88 Score=22.12 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=33.5
Q ss_pred HHHhhhcHHHHHHHHHHHHhcCCChHH-----------------HHHHHHHHHHhhcCCCCcee
Q psy2686 50 LFFKLKNYKTTASFAHRLLELGPSMEV-----------------ATQARKLLAICNANPTDEHT 96 (139)
Q Consensus 50 ~~~K~kN~~tAa~fArRLLel~p~~~~-----------------~~qArkil~~~e~~~~da~~ 96 (139)
..++.|+|..|...-+++|+..|.... .++|.+.+.....++.+.++
T Consensus 156 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~~ 219 (225)
T 2yhc_A 156 YYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTLE 219 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCCC
T ss_pred HHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCchh
Confidence 457899999999999999999887443 23456666655555555444
No 189
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.37 E-value=25 Score=20.82 Aligned_cols=26 Identities=19% Similarity=0.735 Sum_probs=17.3
Q ss_pred eecccccc---------ccCCCccccccCCCcccc
Q psy2686 107 ICARSYTP---------IYHGRESEACVYCGASYL 132 (139)
Q Consensus 107 iC~~s~tP---------Iy~g~~~v~Cp~cga~y~ 132 (139)
+|..+|.- +..|....+|++|+..|.
T Consensus 19 ~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~ 53 (72)
T 1x6e_A 19 ECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFS 53 (72)
T ss_dssp SSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEES
T ss_pred CCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccC
Confidence 67776643 234666778888887764
No 190
>1vzy_A 33 kDa chaperonin; chaperone, heat shock protein, crystal engineering, molecular chaperone, redox-active center, PSI; 1.97A {Bacillus subtilis} SCOP: d.193.1.1 g.81.1.1
Probab=30.28 E-value=11 Score=30.58 Aligned_cols=16 Identities=31% Similarity=0.983 Sum_probs=13.7
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.-.|.|.|||..|.
T Consensus 261 ~g~iev~C~FC~~~Y~ 276 (291)
T 1vzy_A 261 DGQAEAVCHFCNEKYL 276 (291)
T ss_dssp HSEEEEECTTTCCEEE
T ss_pred CCCEEEEeeCCCCEEE
Confidence 3677899999999995
No 191
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.12 E-value=27 Score=18.64 Aligned_cols=17 Identities=24% Similarity=0.462 Sum_probs=11.8
Q ss_pred cCCCccccccCCCcccc
Q psy2686 116 YHGRESEACVYCGASYL 132 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~ 132 (139)
-.|....+|+.||..|.
T Consensus 7 h~~~~~~~C~~C~k~f~ 23 (46)
T 2ep0_A 7 GTGEKPYKCDVCHKSFR 23 (46)
T ss_dssp STTCCSEECSSSCCEES
T ss_pred CCCCCCeeCcccCcccC
Confidence 34666678888887764
No 192
>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone, chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A
Probab=29.54 E-value=11 Score=30.65 Aligned_cols=16 Identities=44% Similarity=1.003 Sum_probs=0.0
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.-.|.|.|||..|.
T Consensus 256 ~g~iev~C~FC~~~Y~ 271 (292)
T 1i7f_A 256 DGEIDMHCDYCGNHYL 271 (292)
T ss_dssp ----------------
T ss_pred CCCEEEEeeCCCCEEE
Confidence 3678999999999996
No 193
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=29.43 E-value=17 Score=20.23 Aligned_cols=16 Identities=19% Similarity=0.478 Sum_probs=13.2
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|+..-+|+.||..|.
T Consensus 4 ~gekp~~C~~CgK~F~ 19 (36)
T 1fv5_A 4 LKPARFMCLPCGIAFS 19 (36)
T ss_dssp SSCCCCEETTTTEECS
T ss_pred CCccCeECCCCCCccC
Confidence 4677889999998875
No 194
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=35.54 E-value=11 Score=17.87 Aligned_cols=11 Identities=36% Similarity=1.032 Sum_probs=8.8
Q ss_pred ccccCCCcccc
Q psy2686 122 EACVYCGASYL 132 (139)
Q Consensus 122 v~Cp~cga~y~ 132 (139)
..|+.||..|.
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2lvt_A 3 CQCVMCGKAFT 13 (29)
Confidence 47999998775
No 195
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=28.90 E-value=26 Score=20.84 Aligned_cols=26 Identities=27% Similarity=0.636 Sum_probs=18.3
Q ss_pred eecccccc---------ccCCCccccccCCCcccc
Q psy2686 107 ICARSYTP---------IYHGRESEACVYCGASYL 132 (139)
Q Consensus 107 iC~~s~tP---------Iy~g~~~v~Cp~cga~y~ 132 (139)
+|..+|.- +-.|....+|+.||..|.
T Consensus 22 ~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~ 56 (74)
T 2lce_A 22 RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFN 56 (74)
T ss_dssp TSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEES
T ss_pred CCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhC
Confidence 68877753 234667788999988764
No 196
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=28.61 E-value=21 Score=21.09 Aligned_cols=26 Identities=23% Similarity=0.600 Sum_probs=18.8
Q ss_pred eecccccc---------ccCCCccccccCCCcccc
Q psy2686 107 ICARSYTP---------IYHGRESEACVYCGASYL 132 (139)
Q Consensus 107 iC~~s~tP---------Iy~g~~~v~Cp~cga~y~ 132 (139)
.|..+|.- +..|.....|+.||..|.
T Consensus 26 ~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 60 (73)
T 1f2i_G 26 SCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60 (73)
T ss_dssp TBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred CCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhC
Confidence 47777753 234777789999998875
No 197
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=28.58 E-value=21 Score=22.07 Aligned_cols=11 Identities=36% Similarity=0.809 Sum_probs=8.8
Q ss_pred cccccCCCccc
Q psy2686 121 SEACVYCGASY 131 (139)
Q Consensus 121 ~v~Cp~cga~y 131 (139)
..+|+|||..-
T Consensus 11 ~~~CSFCGk~~ 21 (51)
T 2ds5_A 11 LLYCSFCGKSQ 21 (51)
T ss_dssp CCBCTTTCCBT
T ss_pred CcEecCCCCCH
Confidence 46899999864
No 198
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=27.85 E-value=18 Score=18.05 Aligned_cols=11 Identities=27% Similarity=0.703 Sum_probs=8.4
Q ss_pred ccccCCCcccc
Q psy2686 122 EACVYCGASYL 132 (139)
Q Consensus 122 v~Cp~cga~y~ 132 (139)
-+|+.||..|.
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 47999998764
No 199
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=27.82 E-value=21 Score=20.18 Aligned_cols=16 Identities=13% Similarity=0.503 Sum_probs=12.9
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 26 ~~~~~~~C~~C~~~f~ 41 (60)
T 2adr_A 26 TNEKPYPCGLCNRAFT 41 (60)
T ss_dssp TSSCSEECTTTCCEES
T ss_pred CCCCCccCCCCCCccC
Confidence 4667789999998875
No 200
>1hgv_A PH75 inovirus major coat protein; virus coat protein, helical virus coat protein, ssDNA viruses, filamentous bacteriophage, thermophiles; 2.4A {Bacteriophage PH75} SCOP: h.1.4.1 PDB: 1hgz_A 1hh0_A
Probab=27.58 E-value=48 Score=20.06 Aligned_cols=21 Identities=29% Similarity=0.523 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHh
Q psy2686 40 QILTLRTATNLFFKLKNYKTTASFAHRLLE 69 (139)
Q Consensus 40 ~~LaLr~Am~~~~K~kN~~tAa~fArRLLe 69 (139)
-.|+|-..++.+|| +|||+|.
T Consensus 25 gvlal~iglsaaw~---------ya~rflk 45 (46)
T 1hgv_A 25 GVLALAIGLSAAWK---------YAKRFLK 45 (46)
T ss_dssp HHHHHHHHHHHHHH---------HHHHTTC
T ss_pred hHHHHHHhHHHHHH---------HHHHHhc
Confidence 36788888888887 5777764
No 201
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=27.42 E-value=1.7e+02 Score=20.93 Aligned_cols=23 Identities=17% Similarity=0.254 Sum_probs=12.4
Q ss_pred HHHhhhcHHHHHHHHHHHHhcCC
Q psy2686 50 LFFKLKNYKTTASFAHRLLELGP 72 (139)
Q Consensus 50 ~~~K~kN~~tAa~fArRLLel~p 72 (139)
..++.|+|..|..+.++.+++.|
T Consensus 281 ~~~~~~~~~~A~~~~~~~~~~~~ 303 (359)
T 3ieg_A 281 CFSKDEKPVEAIRICSEVLQMEP 303 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHccCHHHHHHHHHHHHHhCc
Confidence 33455555555555555555554
No 202
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=27.15 E-value=31 Score=25.95 Aligned_cols=19 Identities=21% Similarity=0.200 Sum_probs=11.7
Q ss_pred HhhhcHHHHHHHHHHHHhc
Q psy2686 52 FKLKNYKTTASFAHRLLEL 70 (139)
Q Consensus 52 ~K~kN~~tAa~fArRLLel 70 (139)
.+.|++..|...-+|.|+.
T Consensus 214 ~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 214 SHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HTTCCHHHHHHHHHHHHHS
T ss_pred HHCCCHHHHHHHHHHHHhc
Confidence 4556666666666666664
No 203
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=27.00 E-value=30 Score=20.67 Aligned_cols=13 Identities=15% Similarity=0.314 Sum_probs=9.5
Q ss_pred ccccccCCCcccc
Q psy2686 120 ESEACVYCGASYL 132 (139)
Q Consensus 120 ~~v~Cp~cga~y~ 132 (139)
...+|+.||..|.
T Consensus 44 ~~~~C~~C~~~f~ 56 (77)
T 2ct1_A 44 AKFHCPHCDTVIA 56 (77)
T ss_dssp SSEECSSSSCEES
T ss_pred CccCCCCCCCccC
Confidence 5677888887764
No 204
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=26.52 E-value=19 Score=24.36 Aligned_cols=11 Identities=36% Similarity=0.860 Sum_probs=8.2
Q ss_pred cccccCCCccc
Q psy2686 121 SEACVYCGASY 131 (139)
Q Consensus 121 ~v~Cp~cga~y 131 (139)
...||+||+..
T Consensus 27 ~y~Cp~CG~~~ 37 (83)
T 1vq8_Z 27 DHACPNCGEDR 37 (83)
T ss_dssp CEECSSSCCEE
T ss_pred cCcCCCCCCcc
Confidence 45899999843
No 205
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=26.50 E-value=84 Score=22.12 Aligned_cols=39 Identities=15% Similarity=0.276 Sum_probs=27.1
Q ss_pred CCCceeecCCCCCCeeeeccccccccCCCccccccCCCccc
Q psy2686 91 PTDEHTIDYDEHNPFQICARSYTPIYHGRESEACVYCGASY 131 (139)
Q Consensus 91 ~~da~~i~yD~~~~F~iC~~s~tPIy~g~~~v~Cp~cga~y 131 (139)
.-|.-+..+|+....+|=+.+-.. ..++.+.||-||-..
T Consensus 42 ~p~~k~y~~~~~~~lDIfG~~~~~--~~s~~~~C~nC~R~v 80 (99)
T 3mhs_C 42 YPDLRSYYFDPNGSLDINGLQKQQ--ESSQYIHCENCGRDV 80 (99)
T ss_dssp CTTCCCCCCCTTSCSCTTSCCCCC--TTSCEEECTTTCCEE
T ss_pred CCCCCCceecCCCCcccCCCcCcc--cCCCeEECCCCCCCc
Confidence 445556666777777776665543 568999999999653
No 206
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.44 E-value=24 Score=20.68 Aligned_cols=12 Identities=25% Similarity=1.068 Sum_probs=6.9
Q ss_pred ccccccCCCccc
Q psy2686 120 ESEACVYCGASY 131 (139)
Q Consensus 120 ~~v~Cp~cga~y 131 (139)
...+|++||..|
T Consensus 9 ~~~~C~~C~k~f 20 (66)
T 2eod_A 9 RTQPCTYCTKEF 20 (66)
T ss_dssp CEEECSSSCCEE
T ss_pred CCeeccccCCcc
Confidence 345666666554
No 207
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=26.40 E-value=1.4e+02 Score=19.82 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=12.8
Q ss_pred HhhhcHHHHHHHHHHHHhcCCC
Q psy2686 52 FKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 52 ~K~kN~~tAa~fArRLLel~p~ 73 (139)
++.|+|..|...-+++++++|.
T Consensus 32 ~~~g~~~~A~~~~~~al~~~p~ 53 (148)
T 2vgx_A 32 YQSGXYEDAHXVFQALCVLDHY 53 (148)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHcCChHHHHHHHHHHHHcCcc
Confidence 4556666666666666665554
No 208
>1vq0_A 33 kDa chaperonin; TM1394, joint center for structural genomics, protein structure initiative, PSI, chaperone; HET: UNL; 2.20A {Thermotoga maritima} SCOP: d.193.1.1 g.81.1.1
Probab=26.14 E-value=18 Score=29.66 Aligned_cols=15 Identities=20% Similarity=0.687 Sum_probs=13.3
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.| -.|.|.|||..|.
T Consensus 269 ~g-iev~C~FC~~~Y~ 283 (302)
T 1vq0_A 269 GK-GEVVCKWCNTRYV 283 (302)
T ss_dssp TC-EEEECTTTCCEEE
T ss_pred CC-cEEEeeCCCCEEE
Confidence 47 8999999999996
No 209
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=25.95 E-value=1.4e+02 Score=19.37 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCCh
Q psy2686 41 ILTLRTATNLFFKLKNYKTTASFAHRLLELGPSM 74 (139)
Q Consensus 41 ~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~ 74 (139)
.-+++.-=+..|+.|+|..|...-++.|+++|..
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~ 46 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN 46 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 3344544567899999999999999999999873
No 210
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.89 E-value=21 Score=19.07 Aligned_cols=16 Identities=25% Similarity=0.731 Sum_probs=12.2
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|+...+|+.||..|.
T Consensus 6 ~~~k~~~C~~C~k~f~ 21 (45)
T 2epq_A 6 SGEKPYSCPVCGLRFK 21 (45)
T ss_dssp SSCCSSEETTTTEECS
T ss_pred CCCCCCcCCCCCcccC
Confidence 3566778999998874
No 211
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=25.30 E-value=21 Score=23.54 Aligned_cols=14 Identities=21% Similarity=0.574 Sum_probs=11.8
Q ss_pred CccccccCCCcccc
Q psy2686 119 RESEACVYCGASYL 132 (139)
Q Consensus 119 ~~~v~Cp~cga~y~ 132 (139)
.+.+.||.||..+.
T Consensus 7 ~~~~~CP~Cgkp~~ 20 (68)
T 1lv3_A 7 TITVNCPTCGKTVV 20 (68)
T ss_dssp CCEEECTTTCCEEE
T ss_pred CCcCcCCCCCCccc
Confidence 57899999998864
No 212
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=25.17 E-value=24 Score=17.75 Aligned_cols=11 Identities=27% Similarity=0.688 Sum_probs=8.8
Q ss_pred ccccCCCcccc
Q psy2686 122 EACVYCGASYL 132 (139)
Q Consensus 122 v~Cp~cga~y~ 132 (139)
-.|+.||..+.
T Consensus 3 ~~C~~C~k~F~ 13 (33)
T 1rim_A 3 FACPECPKRFM 13 (33)
T ss_dssp CCCSSSCCCCS
T ss_pred ccCCCCCchhC
Confidence 47999998775
No 213
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=24.81 E-value=2e+02 Score=22.12 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=25.9
Q ss_pred HHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q psy2686 49 NLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAI 86 (139)
Q Consensus 49 ~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~ 86 (139)
....+.|++..|....++.+++.|....+..+..+..+
T Consensus 457 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 494 (514)
T 2gw1_A 457 QMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEA 494 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 34567788888888888888888876665554444443
No 214
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=24.50 E-value=23 Score=23.34 Aligned_cols=11 Identities=36% Similarity=0.809 Sum_probs=8.7
Q ss_pred cccccCCCccc
Q psy2686 121 SEACVYCGASY 131 (139)
Q Consensus 121 ~v~Cp~cga~y 131 (139)
...|+|||..-
T Consensus 18 ~~~CSFCGK~e 28 (67)
T 1ovx_A 18 LLYCSFCGKSQ 28 (67)
T ss_dssp CCCCTTTCCCT
T ss_pred CcEecCCCCCH
Confidence 46899999754
No 215
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=24.02 E-value=1.6e+02 Score=20.97 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=24.9
Q ss_pred HHHHhhhcHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q psy2686 49 NLFFKLKNYKTTASFAHRLLELGPSMEVATQARKLLAICN 88 (139)
Q Consensus 49 ~~~~K~kN~~tAa~fArRLLel~p~~~~~~qArkil~~~e 88 (139)
...++.|+|..|...-+++|++.|.......|.-.+..+-
T Consensus 60 ~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~ 99 (261)
T 3qky_A 60 RAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCY 99 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHH
Confidence 3446777777777777777777665544445555554444
No 216
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=24.00 E-value=1.4e+02 Score=18.57 Aligned_cols=24 Identities=17% Similarity=0.347 Sum_probs=17.0
Q ss_pred HHhhhcHHHHHHHHHHHHhcCCCh
Q psy2686 51 FFKLKNYKTTASFAHRLLELGPSM 74 (139)
Q Consensus 51 ~~K~kN~~tAa~fArRLLel~p~~ 74 (139)
.++.|+|..|....++.|+++|..
T Consensus 48 ~~~~~~~~~A~~~~~~al~~~p~~ 71 (126)
T 3upv_A 48 LAKLMSFPEAIADCNKAIEKDPNF 71 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCc
Confidence 456777777777777777777653
No 217
>1m0d_A Endonuclease, endodeoxyribonuclease I; holliday junction resolvase, homodimer, domain swapped, composite active site, hydrolase; 1.90A {Enterobacteria phage T7} SCOP: c.52.1.17 PDB: 1m0i_A 2pfj_A 1fzr_A 3cae_A
Probab=23.74 E-value=64 Score=23.98 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=26.1
Q ss_pred HHHHHHHHhhcCCCCceeecCCCCCCeeeeccccccccCCCccc
Q psy2686 79 QARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRESE 122 (139)
Q Consensus 79 qArkil~~~e~~~~da~~i~yD~~~~F~iC~~s~tPIy~g~~~v 122 (139)
--+|++...|++|.=-+.+ |=..+.+.||+|+++.
T Consensus 63 dR~K~k~ikeq~P~ldirf---------vf~~~~~ki~K~s~tt 97 (138)
T 1m0d_A 63 DRKKHLLIREQHPELDIRI---------VFSSSRTKLYKGSPTS 97 (138)
T ss_dssp HHHHHHHHHHHCTTCCEEE---------EESCTTSBSSTTCSCB
T ss_pred HHHHHHHHHHHCCCceEEE---------EEeccccceeccCCCc
Confidence 3578999999998644443 3467899999998864
No 218
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.58 E-value=29 Score=21.59 Aligned_cols=14 Identities=14% Similarity=0.311 Sum_probs=9.8
Q ss_pred CCccccccCCCccc
Q psy2686 118 GRESEACVYCGASY 131 (139)
Q Consensus 118 g~~~v~Cp~cga~y 131 (139)
|...+.|++|+..+
T Consensus 14 ~~r~~~C~~C~~~~ 27 (75)
T 2d9k_A 14 PLRLAVCQHCDLEL 27 (75)
T ss_dssp CCCCEECSSSCCEE
T ss_pred CCcccCCcccChHh
Confidence 45567788887766
No 219
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.51 E-value=29 Score=20.55 Aligned_cols=15 Identities=20% Similarity=0.425 Sum_probs=11.6
Q ss_pred CCCccccccCCCccc
Q psy2686 117 HGRESEACVYCGASY 131 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y 131 (139)
.|.....|++||..|
T Consensus 64 ~~~~~~~C~~C~k~F 78 (79)
T 2dlk_A 64 SDTRDYICEFSGPSS 78 (79)
T ss_dssp HTSCCCSCCSSSCCC
T ss_pred CCCCCeeCCCCCCCC
Confidence 477778899998765
No 220
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=23.46 E-value=1.6e+02 Score=23.44 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCCh
Q psy2686 40 QILTLRTATNLFFKLKNYKTTASFAHRLLELGPSM 74 (139)
Q Consensus 40 ~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~ 74 (139)
..-.++..+....+.|+|..|..+.+++++..|+.
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~ 117 (597)
T 2xpi_A 83 REDYLRLWRHDALMQQQYKCAAFVGEKVLDITGNP 117 (597)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHHHccCchHHHHHHHHHHhhCCCc
Confidence 34557777788888899999998888888887764
No 221
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=22.58 E-value=2.6e+02 Score=22.16 Aligned_cols=38 Identities=18% Similarity=0.114 Sum_probs=29.9
Q ss_pred chhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 36 QPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 36 qp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
.|....-++..-....++.|++..|..+.+++++++|.
T Consensus 511 ~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 548 (597)
T 2xpi_A 511 NEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTN 548 (597)
T ss_dssp CSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSC
T ss_pred chhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 44433556666667788999999999999999999885
No 222
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=22.54 E-value=1.2e+02 Score=17.86 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=27.8
Q ss_pred CchhhHH-HHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChH
Q psy2686 35 LQPVHQI-LTLRTATNLFFKLKNYKTTASFAHRLLELGPSME 75 (139)
Q Consensus 35 Lqp~H~~-LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~ 75 (139)
+.|.+.. .-...|. ..++.|+|..|...-++.|++.|...
T Consensus 29 ~~p~~~~~~~~~lg~-~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 29 TEPVGKDEAYYLMGN-AYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp HCSSTHHHHHHHHHH-HHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HCCCcHHHHHHHHHH-HHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 3455544 3333333 45688999999999999999988643
No 223
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.52 E-value=31 Score=23.21 Aligned_cols=16 Identities=19% Similarity=0.341 Sum_probs=10.9
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
+|+....|+.||..|.
T Consensus 14 ~gekpy~C~~Cgk~F~ 29 (102)
T 2ghf_A 14 KVEGGYECKYCTFQTP 29 (102)
T ss_dssp CCCSSEECSSCSCEES
T ss_pred CCCcCcCCCCCCCccC
Confidence 5666677777776653
No 224
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.18 E-value=34 Score=20.01 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=7.1
Q ss_pred CccccccCCCccc
Q psy2686 119 RESEACVYCGASY 131 (139)
Q Consensus 119 ~~~v~Cp~cga~y 131 (139)
+....|+.||..|
T Consensus 7 ~~~~~C~~C~k~f 19 (70)
T 1x5w_A 7 GHPEKCSECSYSC 19 (70)
T ss_dssp CCSEECSSSSCEE
T ss_pred CCCeECCCCCccc
Confidence 4445566666554
No 225
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=22.10 E-value=75 Score=26.01 Aligned_cols=27 Identities=19% Similarity=0.165 Sum_probs=21.8
Q ss_pred CCChHHHHHHHHHHHHhhcCCCCceee
Q psy2686 71 GPSMEVATQARKLLAICNANPTDEHTI 97 (139)
Q Consensus 71 ~p~~~~~~qArkil~~~e~~~~da~~i 97 (139)
.|+++..+.||+|+.+.+..+.-++.+
T Consensus 267 ~Ps~~ei~~A~~il~a~~~~g~G~~~~ 293 (339)
T 3r4i_A 267 APRDEEITTATEILLAAQSAQWGPTRY 293 (339)
T ss_dssp SCCTHHHHHHHHHHHHHHHTTTSCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 377888999999999888777666664
No 226
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=21.98 E-value=1.4e+02 Score=18.39 Aligned_cols=24 Identities=21% Similarity=0.318 Sum_probs=16.8
Q ss_pred HHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 50 LFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 50 ~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
..++.|+|..|....++.+++.|.
T Consensus 52 ~~~~~~~~~~A~~~~~~al~~~p~ 75 (137)
T 3q49_B 52 CYLKMQQPEQALADCRRALELDGQ 75 (137)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHhcCHHHHHHHHHHHHHhCch
Confidence 345677777777777777777765
No 227
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=21.89 E-value=31 Score=18.92 Aligned_cols=11 Identities=18% Similarity=0.407 Sum_probs=9.1
Q ss_pred ccccccCCCcc
Q psy2686 120 ESEACVYCGAS 130 (139)
Q Consensus 120 ~~v~Cp~cga~ 130 (139)
+..+||.|++.
T Consensus 2 ~k~~CpvCk~q 12 (28)
T 2jvx_A 2 SDFCCPKCQYQ 12 (28)
T ss_dssp CCEECTTSSCE
T ss_pred CcccCcccccc
Confidence 56799999975
No 228
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.39 E-value=39 Score=19.40 Aligned_cols=18 Identities=28% Similarity=0.685 Sum_probs=12.7
Q ss_pred cCCCccccccCCCccccC
Q psy2686 116 YHGRESEACVYCGASYLP 133 (139)
Q Consensus 116 y~g~~~v~Cp~cga~y~p 133 (139)
-.|.....|+.||..|..
T Consensus 13 h~~~~~~~C~~C~k~f~~ 30 (73)
T 2ctu_A 13 HLGDRSQKCSKCGIIFIR 30 (73)
T ss_dssp CCCCSEEECSSSCCEEEC
T ss_pred hCCCCCeeCCcccchhCC
Confidence 356667788888877753
No 229
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.38 E-value=27 Score=23.81 Aligned_cols=10 Identities=30% Similarity=0.909 Sum_probs=7.7
Q ss_pred cccccCCCcc
Q psy2686 121 SEACVYCGAS 130 (139)
Q Consensus 121 ~v~Cp~cga~ 130 (139)
.-.|||||..
T Consensus 35 ky~CpfCGk~ 44 (83)
T 3j21_i 35 KHTCPVCGRK 44 (83)
T ss_dssp CBCCSSSCSS
T ss_pred ccCCCCCCCc
Confidence 3479999975
No 230
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=21.25 E-value=1.7e+02 Score=19.18 Aligned_cols=41 Identities=15% Similarity=0.139 Sum_probs=25.8
Q ss_pred CCchhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChH
Q psy2686 34 KLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSME 75 (139)
Q Consensus 34 ~Lqp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~ 75 (139)
++.|.+...-...|. ..++.|+|..|....++.|++.|...
T Consensus 39 ~~~p~~~~~~~~l~~-~~~~~g~~~~A~~~~~~al~~~p~~~ 79 (164)
T 3sz7_A 39 SIAPANPIYLSNRAA-AYSASGQHEKAAEDAELATVVDPKYS 79 (164)
T ss_dssp HHSTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HhCCcCHHHHHHHHH-HHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 344544333333332 45678888888888888888887643
No 231
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=21.22 E-value=1.5e+02 Score=20.37 Aligned_cols=28 Identities=14% Similarity=0.333 Sum_probs=21.7
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 46 TATNLFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 46 ~Am~~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
.--...++.|++..|..+.++.+++.|.
T Consensus 180 ~la~~~~~~g~~~~A~~~~~~~~~~~~~ 207 (252)
T 2ho1_A 180 EMADLLYKEREYVPARQYYDLFAQGGGQ 207 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 3334567888999999999999888775
No 232
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.14 E-value=32 Score=18.72 Aligned_cols=16 Identities=31% Similarity=0.704 Sum_probs=11.6
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.+.....|+.||..|.
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (48)
T 2epr_A 8 RTRKQVACEICGKIFR 23 (48)
T ss_dssp CCCCSEEETTTTEEES
T ss_pred CCCcCeeCCCCCcccC
Confidence 3556678999988764
No 233
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.06 E-value=42 Score=20.01 Aligned_cols=16 Identities=31% Similarity=0.634 Sum_probs=10.3
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 14 ~~~~~~~C~~C~~~f~ 29 (77)
T 2cot_A 14 RERRRYKCDECGKSFS 29 (77)
T ss_dssp CCSCSSBCSSSCCBCS
T ss_pred CCCCCEECCCCCcccC
Confidence 4556667777776654
No 234
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.93 E-value=39 Score=21.47 Aligned_cols=16 Identities=25% Similarity=0.503 Sum_probs=10.3
Q ss_pred CCCccccccCCCcccc
Q psy2686 117 HGRESEACVYCGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~cga~y~ 132 (139)
.|.....|+.||..|.
T Consensus 20 ~~~~~~~C~~C~k~f~ 35 (98)
T 2gqj_A 20 HERGEAVCPTCNVVTR 35 (98)
T ss_dssp TTTSCCCCTTTCCCCS
T ss_pred ccCCCcCCCCCCCChh
Confidence 4556667777776664
No 235
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=20.86 E-value=1.5e+02 Score=19.67 Aligned_cols=29 Identities=0% Similarity=-0.071 Sum_probs=22.1
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHhcCC
Q psy2686 44 LRTATNLFFKLKNYKTTASFAHRLLELGP 72 (139)
Q Consensus 44 Lr~Am~~~~K~kN~~tAa~fArRLLel~p 72 (139)
+..-....++.|++..|....++.+++.|
T Consensus 150 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 150 FKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 33334456788999999999999998877
No 236
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=20.73 E-value=2e+02 Score=20.95 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=25.2
Q ss_pred hcHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q psy2686 55 KNYKTTASFAHRLLELGPSMEVATQARKLLA 85 (139)
Q Consensus 55 kN~~tAa~fArRLLel~p~~~~~~qArkil~ 85 (139)
++|..|..+-++-|+++|......++.++..
T Consensus 105 g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ 135 (158)
T 1zu2_A 105 HNFDLATQFFQQAVDEQPDNTHYLKSLEMTA 135 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 6999999999999999998777665555543
No 237
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=20.72 E-value=1.4e+02 Score=17.42 Aligned_cols=24 Identities=17% Similarity=0.326 Sum_probs=17.8
Q ss_pred HHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 50 LFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 50 ~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
..++.|+|..|....++.+++.|.
T Consensus 47 ~~~~~~~~~~A~~~~~~~~~~~~~ 70 (118)
T 1elw_A 47 AYAKKGDYQKAYEDGCKTVDLKPD 70 (118)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHhhccHHHHHHHHHHHHHhCcc
Confidence 345677888888888888877765
No 238
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=20.69 E-value=1.6e+02 Score=18.24 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=12.2
Q ss_pred HHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 51 FFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 51 ~~K~kN~~tAa~fArRLLel~p~ 73 (139)
.++.|+|..|....++.|++.|.
T Consensus 37 ~~~~~~~~~A~~~~~~al~~~p~ 59 (117)
T 3k9i_A 37 FRTLGEYRKAEAVLANGVKQFPN 59 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCC
Confidence 34555555555555555555544
No 239
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=20.40 E-value=1.9e+02 Score=18.90 Aligned_cols=39 Identities=13% Similarity=0.060 Sum_probs=23.4
Q ss_pred chhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhcCCChH
Q psy2686 36 QPVHQILTLRTATNLFFKLKNYKTTASFAHRLLELGPSME 75 (139)
Q Consensus 36 qp~H~~LaLr~Am~~~~K~kN~~tAa~fArRLLel~p~~~ 75 (139)
.|.+-..-++.|. ..++.|+|..|...-++.|++.|...
T Consensus 93 ~p~~~~a~~~~g~-~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 93 EETNEKALFRRAK-ARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp STTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred CCcchHHHHHHHH-HHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 4444443344443 33567777777777777777777643
No 240
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=20.27 E-value=83 Score=21.45 Aligned_cols=25 Identities=12% Similarity=-0.037 Sum_probs=17.3
Q ss_pred HHHHhhhcHHHHHHHHHHHHhcCCC
Q psy2686 49 NLFFKLKNYKTTASFAHRLLELGPS 73 (139)
Q Consensus 49 ~~~~K~kN~~tAa~fArRLLel~p~ 73 (139)
...++.|++..|....++.+++.|.
T Consensus 167 ~~~~~~~~~~~A~~~~~~~~~~~~~ 191 (243)
T 2q7f_A 167 MCLANEGMLDEALSQFAAVTEQDPG 191 (243)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHCTT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcc
Confidence 3456677777777777777777665
No 241
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=20.17 E-value=43 Score=17.04 Aligned_cols=16 Identities=25% Similarity=0.627 Sum_probs=12.2
Q ss_pred CCCccccccC--CCcccc
Q psy2686 117 HGRESEACVY--CGASYL 132 (139)
Q Consensus 117 ~g~~~v~Cp~--cga~y~ 132 (139)
.|.....|++ ||..|.
T Consensus 4 ~~~k~~~C~~~~C~k~f~ 21 (37)
T 1va1_A 4 GKKKQHICHIQGCGKVYG 21 (37)
T ss_dssp SSCCCEECCSTTCCCEES
T ss_pred CCCCCCCCCCCCCCCccC
Confidence 4666778986 998875
Done!