AmiGO: BLAST Results


BLAST match view associations BLAST with copa copa copa coatomer protein complex, subunit alpha	gene_product from Danio rerio	1.9e-42
BLAST match view associations BLAST with Copa Copa Copa coatomer protein complex subunit alpha	gene from Rattus norvegicus	6.6e-42
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Bos taurus	8.2e-42
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Homo sapiens	1.0e-41
BLAST match view associations BLAST with COPA COPA COPA Uncharacterized protein	protein from Sus scrofa	1.3e-41
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Canis lupus familiaris	3.5e-41
BLAST match view associations BLAST with LOC100859596 LOC100859596 LOC100859596 Uncharacterized protein	protein from Gallus gallus	3.9e-41
BLAST match view associations BLAST with Copa Copa Copa coatomer protein complex subunit alpha	protein from Mus musculus	1.2e-40
BLAST match view associations BLAST with alphaCop alphaCop alphaCop alpha-coatomer protein	protein from Drosophila melanogaster	3.3e-40
BLAST match view associations BLAST with Y71F9AL.17 Y71F9AL.17 Y71F9AL.17	gene from Caenorhabditis elegans	5.2e-34
BLAST match view associations BLAST with copA copA copA coatomer protein complex alpha subunit	gene from Dictyostelium discoideum	1.0e-27
BLAST match view associations BLAST with AT1G62020 AT1G62020 AT1G62020	protein from Arabidopsis thaliana	3.9e-23
BLAST match view associations BLAST with AT2G21390 AT2G21390 AT2G21390	protein from Arabidopsis thaliana	2.2e-22
BLAST match view associations BLAST with orf19.1672 orf19.1672 orf19.1672	gene_product from Candida albicans	9.0e-16
BLAST match view associations BLAST with COP1 COP1 COP1 Alpha subunit of COPI vesicle coatomer complex	gene from Saccharomyces cerevisiae	3.0e-15
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy2686
        (139 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co...   461  1.9e-42   1
RGD|1310525 - symbol:Copa "coatomer protein complex subun...   444  6.6e-42   1
UNIPROTKB|Q27954 - symbol:COPA "Coatomer subunit alpha" s...   455  8.2e-42   1
UNIPROTKB|P53621 - symbol:COPA "Coatomer subunit alpha" s...   454  1.0e-41   1
UNIPROTKB|F1RJX8 - symbol:COPA "Uncharacterized protein" ...   453  1.3e-41   1
UNIPROTKB|F1PU93 - symbol:COPA "Coatomer subunit alpha" s...   449  3.5e-41   1
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p...   448  3.9e-41   1
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p...   448  4.2e-41   1
MGI|MGI:1334462 - symbol:Copa "coatomer protein complex s...   444  1.2e-40   1
UNIPROTKB|G3V6T1 - symbol:Copa "Protein Copa" species:101...   444  1.2e-40   1
FB|FBgn0025725 - symbol:alphaCop "alpha-coatomer protein"...   440  3.3e-40   1
WB|WBGene00022119 - symbol:Y71F9AL.17 species:6239 "Caeno...   382  5.2e-34   1
DICTYBASE|DDB_G0267982 - symbol:copA "coatomer protein co...   323  1.0e-27   1
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi...   280  3.9e-23   1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi...   273  2.2e-22   1
ASPGD|ASPL0000037303 - symbol:copA species:162425 "Emeric...   246  1.6e-19   1
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph...   242  4.4e-19   1
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ...   211  9.0e-16   1
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic...   206  3.0e-15   1


>ZFIN|ZDB-GENE-020905-2 [details] [associations]
            symbol:copa "coatomer protein complex, subunit alpha"
            species:7955 "Danio rerio" [GO:0030117 "membrane coat"
            evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0030903 "notochord development" evidence=IMP]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
            Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
            ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
            Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
            PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
            UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
            InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
            Uniprot:Q6JWU9
        Length = 1226

 Score = 461 (167.3 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 87/139 (62%), Positives = 100/139 (71%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL MET RK+  K +   Q RICE+AAYFTH  LQPVH +L LRTA NLFFKL+N+KT 
Sbjct:  1064 IGLTMETERKKLPKDSLDEQKRICEMAAYFTHCSLQPVHMVLVLRTALNLFFKLRNFKTA 1123

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A FA RLLELGP  EVA Q RK+LA C  + TD H ++YD HNPF ICA SYTP+Y GR 
Sbjct:  1124 AGFARRLLELGPKPEVAQQTRKILAACEKSLTDAHQLNYDPHNPFDICAASYTPLYRGRP 1183

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y PKYKGE+
Sbjct:  1184 VEKCPLSGACYCPKYKGEV 1202


>RGD|1310525 [details] [associations]
            symbol:Copa "coatomer protein complex subunit alpha"
            species:10116 "Rattus norvegicus" [GO:0005615 "extracellular space"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0030126
            "COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
            secretion" evidence=ISO] InterPro:IPR006692 InterPro:IPR010714
            Pfam:PF04053 Pfam:PF06957 RGD:1310525 GO:GO:0006886 GO:GO:0005615
            GO:GO:0016192 GO:GO:0005198 GO:GO:0030157 GO:GO:0030126
            UniGene:Rn.203109 EMBL:BC091312 IPI:IPI00372458 STRING:Q5BJV4
            PRIDE:Q5BJV4 HOVERGEN:HBG068904 InParanoid:Q5BJV4
            ArrayExpress:Q5BJV4 Genevestigator:Q5BJV4 Uniprot:Q5BJV4
        Length = 568

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 85/139 (61%), Positives = 99/139 (71%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL ME  RK+  K     Q RICE+AAYFTHS LQPVH IL LRTA NLFFKLKN+KT 
Sbjct:   406 VGLCMEIERKKLPKETLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTA 465

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A+FA RLLELGP  EVA Q RK+L+ C  NPTD   ++YD HNPF ICA SY PIY G+ 
Sbjct:   466 ATFARRLLELGPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKP 525

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y P++KG++
Sbjct:   526 VEKCPLSGACYSPEFKGQI 544


>UNIPROTKB|Q27954 [details] [associations]
            symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
            taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
            "retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
            [GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
            "intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
            "pancreatic juice secretion" evidence=IEA] [GO:0005615
            "extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
            evidence=IEA] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
            Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
            PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
            GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
            RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
            ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
            Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
            CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
            EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
        Length = 1224

 Score = 455 (165.2 bits), Expect = 8.2e-42, P = 8.2e-42
 Identities = 85/139 (61%), Positives = 101/139 (72%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL MET RK+  K     Q RICE+AAYFTHS LQPVH IL LRTA NLFFKLKN++T 
Sbjct:  1062 VGLSMETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTA 1121

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A+FA RLLELGP  EVA Q RK+L+ C  NPTD + ++YD HNPF ICA SY PIY G+ 
Sbjct:  1122 AAFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKP 1181

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y P++KG++
Sbjct:  1182 VEKCPLSGACYSPEFKGQI 1200


>UNIPROTKB|P53621 [details] [associations]
            symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
            sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
            vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
            "pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
            evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
            Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
            organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
            vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
            GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
            InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
            Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
            GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
            EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
            IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
            RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
            ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
            MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
            PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
            Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
            UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
            MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
            ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
            CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
            Uniprot:P53621
        Length = 1224

 Score = 454 (164.9 bits), Expect = 1.0e-41, P = 1.0e-41
 Identities = 85/139 (61%), Positives = 101/139 (72%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL +ET RK+  K     Q RICE+AAYFTHS LQPVH IL LRTA NLFFKLKN+KT 
Sbjct:  1062 VGLSVETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTA 1121

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A+FA RLLELGP  EVA Q RK+L+ C  NPTD + ++YD HNPF ICA SY PIY G+ 
Sbjct:  1122 ATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKP 1181

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y P++KG++
Sbjct:  1182 VEKCPLSGACYSPEFKGQI 1200


>UNIPROTKB|F1RJX8 [details] [associations]
            symbol:COPA "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
            [GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
            vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
            transport" evidence=IEA] [GO:0006886 "intracellular protein
            transport" evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
            EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
            Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
            Uniprot:F1RJX8
        Length = 1224

 Score = 453 (164.5 bits), Expect = 1.3e-41, P = 1.3e-41
 Identities = 85/139 (61%), Positives = 101/139 (72%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL ME  RK+  K +   Q RICE+AAYFTHS LQPVH IL LRTA NLFFKLKN+KT 
Sbjct:  1062 VGLSMEIERKKLPKESLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTA 1121

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A+FA RLLELGP  EVA Q RK+L+ C  NPTD + ++YD HNPF ICA SY PIY G+ 
Sbjct:  1122 ATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKP 1181

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y P++KG++
Sbjct:  1182 VEKCPLSGACYSPEFKGQI 1200


>UNIPROTKB|F1PU93 [details] [associations]
            symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
            lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0005198
            "structural molecule activity" evidence=IEA] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
            EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
        Length = 1214

 Score = 449 (163.1 bits), Expect = 3.5e-41, P = 3.5e-41
 Identities = 85/139 (61%), Positives = 100/139 (71%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL ME  RK+  K     Q RICE+AAYFTHS LQPVH IL LRTA NLFFKLKN+KT 
Sbjct:  1052 VGLCMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTA 1111

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A+FA RLLELGP  EVA Q RK+L+ C  NPTD + ++YD HNPF ICA SY PIY G+ 
Sbjct:  1112 ATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKP 1171

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y P++KG++
Sbjct:  1172 VEKCPLSGACYSPEFKGQI 1190


>UNIPROTKB|H9L3L2 [details] [associations]
            symbol:LOC100859596 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
            Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
            GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
            PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
            Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
        Length = 1134

 Score = 448 (162.8 bits), Expect = 3.9e-41, P = 3.9e-41
 Identities = 84/139 (60%), Positives = 100/139 (71%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL ME  RK+  K     Q RICE+AAYFTHS LQPVH IL LRTA NLFFKLKN+KT 
Sbjct:   972 VGLSMEIERKKLPKETLEHQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTA 1031

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A+FA RLLELGP  EVA Q RK+L+ C  NPTD + ++YD HNPF ICA SY PIY G+ 
Sbjct:  1032 ATFARRLLELGPKPEVAQQTRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKP 1091

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y P+++G++
Sbjct:  1092 VEKCPLSGACYCPEFQGQI 1110


>UNIPROTKB|H9KZL3 [details] [associations]
            symbol:LOC100859596 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
            [GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
            "pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
            Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
        Length = 1169

 Score = 448 (162.8 bits), Expect = 4.2e-41, P = 4.2e-41
 Identities = 84/139 (60%), Positives = 100/139 (71%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL ME  RK+  K     Q RICE+AAYFTHS LQPVH IL LRTA NLFFKLKN+KT 
Sbjct:  1007 VGLSMEIERKKLPKETLEHQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTA 1066

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A+FA RLLELGP  EVA Q RK+L+ C  NPTD + ++YD HNPF ICA SY PIY G+ 
Sbjct:  1067 ATFARRLLELGPKPEVAQQTRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKP 1126

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y P+++G++
Sbjct:  1127 VEKCPLSGACYCPEFQGQI 1145


>MGI|MGI:1334462 [details] [associations]
            symbol:Copa "coatomer protein complex subunit alpha"
            species:10090 "Mus musculus" [GO:0005179 "hormone activity"
            evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
            [GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
            "COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
            secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
            evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
            GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
            InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
            HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
            HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
            EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
            ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
            PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
            Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
            UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
            Genevestigator:Q8CIE6 Uniprot:Q8CIE6
        Length = 1224

 Score = 444 (161.4 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 85/139 (61%), Positives = 99/139 (71%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL ME  RK+  K     Q RICE+AAYFTHS LQPVH IL LRTA NLFFKLKN+KT 
Sbjct:  1062 VGLCMEIERKKLPKETLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTA 1121

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A+FA RLLELGP  EVA Q RK+L+ C  NPTD   ++YD HNPF ICA SY PIY G+ 
Sbjct:  1122 ATFARRLLELGPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKP 1181

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y P++KG++
Sbjct:  1182 VEKCPLSGACYSPEFKGQI 1200


>UNIPROTKB|G3V6T1 [details] [associations]
            symbol:Copa "Protein Copa" species:10116 "Rattus
            norvegicus" [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
            "COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
            secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
            CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
            RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
            PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
            KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
        Length = 1224

 Score = 444 (161.4 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 85/139 (61%), Positives = 99/139 (71%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL ME  RK+  K     Q RICE+AAYFTHS LQPVH IL LRTA NLFFKLKN+KT 
Sbjct:  1062 VGLCMEIERKKLPKETLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTA 1121

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             A+FA RLLELGP  EVA Q RK+L+ C  NPTD   ++YD HNPF ICA SY PIY G+ 
Sbjct:  1122 ATFARRLLELGPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKP 1181

Query:   121 SEACVYCGASYLPKYKGEL 139
              E C   GA Y P++KG++
Sbjct:  1182 VEKCPLSGACYSPEFKGQI 1200


>FB|FBgn0025725 [details] [associations]
            symbol:alphaCop "alpha-coatomer protein" species:7227
            "Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
            transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
            coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
            evidence=NAS] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
            [GO:0048812 "neuron projection morphogenesis" evidence=IMP]
            [GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
            "cell morphogenesis" evidence=IMP] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
            GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
            PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
            InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
            ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
            PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
            OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
            Uniprot:O77285
        Length = 1234

 Score = 440 (159.9 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 82/139 (58%), Positives = 99/139 (71%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL+MET RK   KS    Q R+CE+AAYFTH KLQPVHQILTLRTA N+FFKLKNYKT 
Sbjct:  1072 VGLKMETVRKGMPKSTLEEQKRLCEMAAYFTHCKLQPVHQILTLRTALNMFFKLKNYKTA 1131

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             ASFA RLLEL P  +VA Q RK+L     NP DEH + Y+E NPF IC  S+ P+Y G+ 
Sbjct:  1132 ASFARRLLELAPRPDVAQQVRKILQAYEVNPVDEHQLQYEEFNPFTICGISWKPLYRGKP 1191

Query:   121 SEACVYCGASYLPKYKGEL 139
                C +C +S+ P++KG L
Sbjct:  1192 EVTCPFCSSSFDPQFKGNL 1210


>WB|WBGene00022119 [details] [associations]
            symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
            [GO:0005198 "structural molecule activity" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
            "membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
            larval development" evidence=IMP] [GO:0032940 "secretion by cell"
            evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
            GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
            GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
            InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
            GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
            KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
            RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
            DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
            PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
            KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
            WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
        Length = 1232

 Score = 382 (139.5 bits), Expect = 5.2e-34, P = 5.2e-34
 Identities = 74/137 (54%), Positives = 91/137 (66%)

Query:     3 LQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTTAS 62
             L +ETYRK+  K+N     R  ELAAYFTH +LQP+H+ILTLR+A N FFK+K  KT AS
Sbjct:  1073 LLLETYRKDLPKTNLEDAKRNAELAAYFTHFELQPMHRILTLRSAINTFFKMKQMKTCAS 1132

Query:    63 FAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRESE 122
                RLLEL P  EVA Q RK+L     + TD H + YDEHNPF +C+R + P+Y GR   
Sbjct:  1133 LCKRLLELAPKPEVAAQIRKVLTAAEKDNTDAHQLTYDEHNPFVVCSRQFVPLYRGRPLC 1192

Query:   123 ACVYCGASYLPKYKGEL 139
              C YCGASY    +GE+
Sbjct:  1193 KCPYCGASYSEGLEGEV 1209


>DICTYBASE|DDB_G0267982 [details] [associations]
            symbol:copA "coatomer protein complex alpha subunit"
            species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
            coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0005198
            "structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
            "Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
            evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
            GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
            SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
            eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
            GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
            STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
            KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
            Uniprot:Q55FR9
        Length = 1221

 Score = 323 (118.8 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 65/143 (45%), Positives = 91/143 (63%)

Query:     1 MGLQMETYRKE-QLKSNESSQV-RICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYK 58
             +G+++E  RKE  + + + S + R  ELAAYFTH  L P H IL+LR+A N  +K+K++ 
Sbjct:  1056 LGIKIELQRKELSIGAQKDSTLGRQAELAAYFTHCNLDPSHLILSLRSAMNCAYKVKHFN 1115

Query:    59 TTASFAHRLLELGPSMEVATQARKLLAICNANPT--DEHTIDYDEHNPFQICARSYTPIY 116
               ASFA RL+ L P+ ++ATQA+K+       PT  D   ++YDE NPF ICA SY PIY
Sbjct:  1116 LAASFARRLISLNPNPDLATQAKKVFNFAQQTPTPSDIQQLNYDERNPFVICAHSYVPIY 1175

Query:   117 HGRESEACVYCGASYLPKYKGEL 139
              G     C YC + YLP +KG++
Sbjct:  1176 KGSPLIKCPYCSSCYLPTHKGKV 1198


>TAIR|locus:2036823 [details] [associations]
            symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
            [GO:0005198 "structural molecule activity" evidence=IEA]
            [GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
            "intracellular" evidence=IEA] [GO:0006886 "intracellular protein
            transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
            transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
            evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
            "gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
            process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
            evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
            PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
            EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
            UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
            STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
            GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
            HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
            PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
            InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
        Length = 1216

 Score = 280 (103.6 bits), Expect = 3.9e-23, P = 3.9e-23
 Identities = 58/139 (41%), Positives = 80/139 (57%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GLQME  R+E     +   VR  ELAAYFTH  LQ  H  L L +A  + +K KN  T 
Sbjct:  1058 LGLQMELKRREM----KDDPVRQQELAAYFTHCNLQTPHLRLALLSAMGVCYKAKNLATA 1113

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             ++FA RLLE  P    A  AR+++     N TDE  ++YD  NPF +C  +Y PIY G++
Sbjct:  1114 SNFARRLLETSPVDSQAKMARQVVQAAERNMTDETKLNYDFRNPFVVCGSTYVPIYRGQK 1173

Query:   121 SEACVYCGASYLPKYKGEL 139
               +C YC A ++P  +G +
Sbjct:  1174 DVSCPYCTARFVPNQEGNI 1192


>TAIR|locus:2050064 [details] [associations]
            symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
            [GO:0005198 "structural molecule activity" evidence=IEA]
            [GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
            Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
            "vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
            coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
            evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
            "Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
            "cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
            organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
            formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
            evidence=RCA] [GO:0051788 "response to misfolded protein"
            evidence=RCA] [GO:0080129 "proteasome core complex assembly"
            evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
            Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
            PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
            HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
            InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
            PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
            ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
            PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
            KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
            OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
        Length = 1218

 Score = 273 (101.2 bits), Expect = 2.2e-22, P = 2.2e-22
 Identities = 59/140 (42%), Positives = 81/140 (57%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GLQ+E  R+E     +   VR  ELAAYFTH KLQ  H  L   +A  + +K KN  T 
Sbjct:  1059 LGLQLELKRREM----KDDPVRQQELAAYFTHCKLQTPHLRLAYFSAMTVCYKSKNMATA 1114

Query:    61 ASFAHRLLELGPSMEV-ATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGR 119
             A FA  LL+  P++E  A  AR+++     N TD  T++YD  NPF IC  +Y PIY G+
Sbjct:  1115 AHFARSLLDTNPTIESQARTARQVMQAAERNMTDATTLNYDFRNPFVICGSTYVPIYKGQ 1174

Query:   120 ESEACVYCGASYLPKYKGEL 139
             +  AC YC A ++P  +G +
Sbjct:  1175 KDVACPYCTARFVPSQEGNI 1194


>ASPGD|ASPL0000037303 [details] [associations]
            symbol:copA species:162425 "Emericella nidulans"
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
            tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
            [GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
            "structural molecule activity" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
            vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
            evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
            Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
            InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
            ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
            Uniprot:C8VIU7
        Length = 1205

 Score = 246 (91.7 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 54/139 (38%), Positives = 76/139 (54%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             + + +E  R+           R  EL+AYFT  KL+  H+ L L  A  L F  KNY + 
Sbjct:  1043 LAMTIELERRALSTDTPEGLKRSLELSAYFTIPKLEVAHRQLALMAAMKLAFTHKNYSSA 1102

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
              SFA+R+L  G S ++  QA+K+ A C  NP D   I++D+   F ICA S+TPIY G  
Sbjct:  1103 LSFANRMLANGGSAKLLDQAKKVKAQCERNPQDSIEIEFDQFAEFDICAASHTPIYSGSP 1162

Query:   121 SEACVYCGASYLPKYKGEL 139
             S +  + GA Y  +YKG +
Sbjct:  1163 SVSDPFTGAKYHEQYKGSV 1181


>POMBASE|SPBPJ4664.04 [details] [associations]
            symbol:SPBPJ4664.04 "coatomer alpha subunit
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0006886 "intracellular protein transport" evidence=IC]
            [GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
            [GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
            evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
            Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
            PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
            SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
            EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
            HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
            PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
            STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
            KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
            Uniprot:Q96WV5
        Length = 1207

 Score = 242 (90.2 bits), Expect = 4.4e-19, P = 4.4e-19
 Identities = 48/129 (37%), Positives = 71/129 (55%)

Query:    11 EQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTTASFAHRLLEL 70
             E+ +  E    R  EL+ YF  + LQP+H I+ LR A N   KLKNYK+ +   ++LL+L
Sbjct:  1059 ERRRLGEEDTKRALELSYYFASADLQPMHSIIALRLAINASHKLKNYKSASFLGNKLLQL 1118

Query:    71 GPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRESEACVYCGAS 130
               S   A  A + + + + NP D   I+YD H   +IC ++ TP+Y G + + C  CGA 
Sbjct:  1119 AESGPAAEAANRAITLGDRNPHDAFEIEYDPHVEMRICPKTLTPVYSGDDFDVCSVCGAV 1178

Query:   131 YLPKYKGEL 139
             Y   Y  E+
Sbjct:  1179 YHKGYVNEV 1187


>CGD|CAL0000105 [details] [associations]
            symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
            "COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
            evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
            Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
            GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
            PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
            InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
            ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
            KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
        Length = 1221

 Score = 211 (79.3 bits), Expect = 9.0e-16, P = 9.0e-16
 Identities = 57/142 (40%), Positives = 80/142 (56%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL +E  R++ L S++    R  ELAAYFT ++LQP H++  L+ A    FK KNY + 
Sbjct:  1065 LGLSIELERRK-LPSSDVK--RNLELAAYFTRAQLQPSHKLNALQVAMTQSFKNKNYASA 1121

Query:    61 ASFAHRLLELGP-SMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGR 119
             + FA  LL++   S   A QA KL    +    D   I++D    F IC  S+TPIY G 
Sbjct:  1122 SYFAEELLKISNNSGPRAEQAMKLKNKADTIANDTIEINFDPFAEFDICCGSFTPIYKGE 1181

Query:   120 E--SEACVYCGASYLPKYKGEL 139
                 EA V  GA+Y P++KG+L
Sbjct:  1182 PFIKEALV--GATYKPEFKGKL 1201


>SGD|S000002304 [details] [associations]
            symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
            species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
            coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
            "cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
            vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
            evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
            "structural molecule activity" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0030117
            "membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
            evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
            evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
            Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
            SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
            InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
            GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
            HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
            EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
            PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
            ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
            MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
            EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
            OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
            Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
        Length = 1201

 Score = 206 (77.6 bits), Expect = 3.0e-15, P = 3.0e-15
 Identities = 51/139 (36%), Positives = 77/139 (55%)

Query:     1 MGLQMETYRKEQLKSNESSQVRICELAAYFTHSKLQPVHQILTLRTATNLFFKLKNYKTT 60
             +GL +E  R+  LK  E + VR+ ELAAYFT +KL P+H+   L+ A +  FK KN+   
Sbjct:  1046 LGLSIELERRS-LK--EGNTVRMLELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQA 1102

Query:    61 ASFAHRLLELGPSMEVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRE 120
             + FA   L++  S   A QARK+    ++  +D   ID+D +  F ICA +Y PIY    
Sbjct:  1103 SYFAGEFLKIISSGPRAEQARKIKNKADSMASDAIPIDFDPYAKFDICAATYKPIYEDTP 1162

Query:   121 SEACVYCGASYLPKYKGEL 139
             S +    G+ Y+   K ++
Sbjct:  1163 SVSDPLTGSKYVITEKDKI 1181


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.132   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      139       139   0.00091  102 3  11 22  0.41    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  19
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  138 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.03u 0.07s 14.10t   Elapsed:  00:00:42
  Total cpu time:  14.03u 0.07s 14.10t   Elapsed:  00:00:42
  Start:  Thu Aug 15 14:04:57 2013   End:  Thu Aug 15 14:05:39 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with copa copa copa coatomer protein complex, subunit alpha	gene_product from Danio rerio	1.9e-42
BLAST match view associations BLAST with Copa Copa Copa coatomer protein complex subunit alpha	gene from Rattus norvegicus	6.6e-42
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Bos taurus	8.2e-42
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Homo sapiens	1.0e-41
BLAST match view associations BLAST with COPA COPA COPA Uncharacterized protein	protein from Sus scrofa	1.3e-41
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Canis lupus familiaris	3.5e-41
BLAST match view associations BLAST with LOC100859596 LOC100859596 LOC100859596 Uncharacterized protein	protein from Gallus gallus	3.9e-41
BLAST match view associations BLAST with Copa Copa Copa coatomer protein complex subunit alpha	protein from Mus musculus	1.2e-40
BLAST match view associations BLAST with alphaCop alphaCop alphaCop alpha-coatomer protein	protein from Drosophila melanogaster	3.3e-40
BLAST match view associations BLAST with Y71F9AL.17 Y71F9AL.17 Y71F9AL.17	gene from Caenorhabditis elegans	5.2e-34
BLAST match view associations BLAST with copA copA copA coatomer protein complex alpha subunit	gene from Dictyostelium discoideum	1.0e-27
BLAST match view associations BLAST with AT1G62020 AT1G62020 AT1G62020	protein from Arabidopsis thaliana	3.9e-23
BLAST match view associations BLAST with AT2G21390 AT2G21390 AT2G21390	protein from Arabidopsis thaliana	2.2e-22
BLAST match view associations BLAST with orf19.1672 orf19.1672 orf19.1672	gene_product from Candida albicans	9.0e-16
BLAST match view associations BLAST with COP1 COP1 COP1 Alpha subunit of COPI vesicle coatomer complex	gene from Saccharomyces cerevisiae	3.0e-15