BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2689
(262 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q767L0|ABCF1_PIG ATP-binding cassette sub-family F member 1 OS=Sus scrofa GN=ABCF1
PE=2 SV=1
Length = 807
Score = 197 bits (501), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/263 (47%), Positives = 165/263 (62%), Gaps = 43/263 (16%)
Query: 8 KEKKQLKKQSKYQQELSALSGGQGTDELENFTVSQSSKASSKRSTVDDNSVDIKVENFSL 67
KEK + +Q +Y++++++L + +F+VSQ+ +S R + +N+ DIK+E FS+
Sbjct: 218 KEKAKKAEQMEYERQVASLKAANAAEN--DFSVSQAEMSS--RQAMLENASDIKLEKFSI 273
Query: 68 SP-----CLKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEA 122
S + I +GRRYGLVGPNG GKTTLL+HIA RAL+IP +ID+L CEQEV A
Sbjct: 274 SAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVA 333
Query: 123 SDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERD 182
+ AV V L AD R+KLL+E +L+
Sbjct: 334 DETPAVQAV-------------------------------LRADTKRLKLLEEERRLQGQ 362
Query: 183 -ESGDNQL--RLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRV 239
E GD+ RL +VY+EL++ A AAE +ARRILAGLGF EMQ + T++FSGGWRMRV
Sbjct: 363 LEQGDDTAADRLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRV 422
Query: 240 SLARALFLEPTLLLLDEPTNHLD 262
SLARALF+EPTLL+LDEPTNHLD
Sbjct: 423 SLARALFMEPTLLMLDEPTNHLD 445
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%)
Query: 188 QLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFL 247
QLR+ E E + AR+ L G + SGG + RV A
Sbjct: 662 QLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACR 721
Query: 248 EPTLLLLDEPTNHLD 262
EP +L+LDEPTN+LD
Sbjct: 722 EPDVLILDEPTNNLD 736
>sp|Q7YR37|ABCF1_PANTR ATP-binding cassette sub-family F member 1 OS=Pan troglodytes
GN=ABCF1 PE=3 SV=1
Length = 807
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 164/263 (62%), Gaps = 43/263 (16%)
Query: 8 KEKKQLKKQSKYQQELSALSGGQGTDELENFTVSQSSKASSKRSTVDDNSVDIKVENFSL 67
KEK + +Q +Y++++++L + +F+VSQ+ +S R + +N+ DIK+E FS+
Sbjct: 218 KEKAKKAEQMEYERQVASLKAANAAEN--DFSVSQAEMSS--RQAMLENASDIKLEKFSI 273
Query: 68 SP-----CLKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEA 122
S + I + RRYGLVGPNG GKTTLL+HIA RAL+IP +ID+L CEQEV A
Sbjct: 274 SAHGKELFVNADLYIVASRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVA 333
Query: 123 SDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERD 182
+ AV V L AD R+KLL+E +L+
Sbjct: 334 DETPAVQAV-------------------------------LRADTKRLKLLEEERRLQGQ 362
Query: 183 -ESGDNQL--RLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRV 239
E GD+ RL +VY+EL++ A AAE +ARRILAGLGF EMQ + T++FSGGWRMRV
Sbjct: 363 LEQGDDTAAERLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRV 422
Query: 240 SLARALFLEPTLLLLDEPTNHLD 262
SLARALF+EPTLL+LDEPTNHLD
Sbjct: 423 SLARALFMEPTLLMLDEPTNHLD 445
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%)
Query: 188 QLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFL 247
QLR+ E E + AR+ L G + SGG + RV A
Sbjct: 662 QLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACR 721
Query: 248 EPTLLLLDEPTNHLD 262
EP +L+LDEPTN+LD
Sbjct: 722 EPDVLILDEPTNNLD 736
>sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1
PE=1 SV=2
Length = 845
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 160/255 (62%), Gaps = 43/255 (16%)
Query: 16 QSKYQQELSALSGGQGTDELENFTVSQSSKASSKRSTVDDNSVDIKVENFSLSP-----C 70
Q +Y++++++L + +F+VSQ+ +S R + +N+ DIK+E FS+S
Sbjct: 264 QMEYERQVASLKAANAAEN--DFSVSQAEMSS--RQAMLENASDIKLEKFSISAHGKELF 319
Query: 71 LKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNI 130
+ I +GRRYGLVGPNG GKTTLL+HIA RAL+IP +ID+L CEQEV A + AV
Sbjct: 320 VNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADETPAVQA 379
Query: 131 VLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERD-ESGDNQL 189
V L AD R+KLL+E +L+ E GD+
Sbjct: 380 V-------------------------------LRADTKRLKLLEEERRLQGQLEQGDDTA 408
Query: 190 --RLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFL 247
RL +VY+EL++ A AAE +ARRILAGLGF EMQ + T++FSGGWRMRVSLARALF+
Sbjct: 409 AERLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFM 468
Query: 248 EPTLLLLDEPTNHLD 262
EPTLL+LDEPTNHLD
Sbjct: 469 EPTLLMLDEPTNHLD 483
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%)
Query: 188 QLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFL 247
QLR+ E E + AR+ L G + SGG + RV A
Sbjct: 700 QLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACR 759
Query: 248 EPTLLLLDEPTNHLD 262
EP +L+LDEPTN+LD
Sbjct: 760 EPDVLILDEPTNNLD 774
>sp|Q6MG08|ABCF1_RAT ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus
GN=Abcf1 PE=1 SV=1
Length = 839
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 158/255 (61%), Gaps = 43/255 (16%)
Query: 16 QSKYQQELSALSGGQGTDELENFTVSQSSKASSKRSTVDDNSVDIKVENFSLSP-----C 70
Q Y++++ +L + +F+VSQ+ +S R + +N+ DIK+E FS+S
Sbjct: 258 QMDYERQVESLKAANAAEN--DFSVSQAEVSS--RQAMLENASDIKLEKFSISAHGKELF 313
Query: 71 LKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNI 130
+ I +GRRYGLVGPNG GKTTLL+HIA RAL+IP +ID+L CEQEV A + AV
Sbjct: 314 VNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADETPAVQA 373
Query: 131 VLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERD-ESGDNQL 189
V L AD R++LL+E +L+ E GD+
Sbjct: 374 V-------------------------------LRADTKRLRLLEEEKRLQGQLEQGDDTA 402
Query: 190 --RLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFL 247
+L +VY+EL++ A AAE +ARRILAGLGF EMQ + T++FSGGWRMRVSLARALF+
Sbjct: 403 AEKLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFM 462
Query: 248 EPTLLLLDEPTNHLD 262
EPTLL+LDEPTNHLD
Sbjct: 463 EPTLLMLDEPTNHLD 477
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 210 ARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
AR+ L G + SGG + RV A EP +L+LDEPTN+LD
Sbjct: 716 ARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLD 768
>sp|Q6P542|ABCF1_MOUSE ATP-binding cassette sub-family F member 1 OS=Mus musculus GN=Abcf1
PE=1 SV=1
Length = 837
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 165/264 (62%), Gaps = 39/264 (14%)
Query: 5 LSHKEKKQLKKQSKYQQELSALSGGQGTDELENFTVSQSSKASSKRSTVDDNSVDIKVEN 64
LS KEKK+LKKQ Y++++ +L + +F+VSQ+ +S R + +N+ DIK+E
Sbjct: 245 LSKKEKKKLKKQMDYERQVESLKAANAAEN--DFSVSQAEVSS--RQAMLENASDIKLEK 300
Query: 65 FSLSP-----CLKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQE 119
FS+S + I +GRRYGLVGPNG GKTTLL+HIA RAL+IP +ID+L CEQE
Sbjct: 301 FSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQE 360
Query: 120 VEASDDSAVNIVLSAD-KNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSK 178
V A + AV VL AD K L +E Q+E DD+A
Sbjct: 361 VVADETPAVQAVLRADTKRLRLLEEERRLQGQLEQGDDTAAE------------------ 402
Query: 179 LERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMR 238
+L +VY+EL++ A AAE +ARRILAGLGF EMQ + T++FSGGWRMR
Sbjct: 403 -----------KLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMR 451
Query: 239 VSLARALFLEPTLLLLDEPTNHLD 262
VSLARALF+EPTLL+LDEPTNHLD
Sbjct: 452 VSLARALFMEPTLLMLDEPTNHLD 475
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 210 ARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
AR+ L G + SGG + RV A EP +L+LDEPTN+LD
Sbjct: 714 ARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLD 766
>sp|Q9M1H3|AB4F_ARATH ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4
PE=2 SV=1
Length = 723
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 159/280 (56%), Gaps = 53/280 (18%)
Query: 5 LSHKEKKQLKKQSKYQQELSALSGGQ---GTDELENFTVSQSSKAS--SKRSTVDDNSVD 59
+S +K+Q K+++K + L A + D+ + FTV SK S D N D
Sbjct: 103 ISVTDKEQKKREAKERLALQAAESAKREAMKDDHDAFTVVIGSKTSVLEGDDMADANVKD 162
Query: 60 IKVENFSLSPCLK-----VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLL 114
I +E+FS+S K +I+ G+RYGL+GPNG GK+TLL+ +A R + +P +ID+L
Sbjct: 163 ITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVL 222
Query: 115 YCEQEVEASDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLK 174
EQEV + SA+N V +SA++ VKL +
Sbjct: 223 LVEQEVVGDEKSALNAV-------------------------------VSANEELVKLRE 251
Query: 175 ECSKLERDESGDN------------QLRLTEVYDELKSIEADAAEPRARRILAGLGFTKE 222
E L++ SG + +L E+YD L+ + +DAAE +A +ILAGLGFTK+
Sbjct: 252 EAEALQKSSSGADGENVDGEDDDDTGEKLAELYDRLQILGSDAAEAQASKILAGLGFTKD 311
Query: 223 MQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
MQ ++T+ FSGGWRMR+SLARALF++PTLLLLDEPTNHLD
Sbjct: 312 MQVRATQSFSGGWRMRISLARALFVQPTLLLLDEPTNHLD 351
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 74/199 (37%), Gaps = 57/199 (28%)
Query: 64 NFSLSPCLKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEAS 123
+F LS V I G R +VGPNG GK+TLL +A DL+ E E+ S
Sbjct: 510 DFRLS---NVDVGIDMGTRVAIVGPNGAGKSTLLNLLAG---------DLVPTEGEMRRS 557
Query: 124 DDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDE 183
++++ + + ++ V +L +L D+
Sbjct: 558 -------------QKLRIGRYSQHFVDLLTMGETPVQYLL--------------RLHPDQ 590
Query: 184 SGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLAR 243
G + + +++ A L G + SGG + RV
Sbjct: 591 EG---------FSKQEAVRAK---------LGKFGLPSHNHLSPIAKLSGGQKARVVFTS 632
Query: 244 ALFLEPTLLLLDEPTNHLD 262
+P +LLLDEPTNHLD
Sbjct: 633 ISMSKPHILLLDEPTNHLD 651
>sp|Q8K268|ABCF3_MOUSE ATP-binding cassette sub-family F member 3 OS=Mus musculus GN=Abcf3
PE=1 SV=1
Length = 709
Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 33/235 (14%)
Query: 35 LENFTVSQ--SSKASSKRSTVDDNSVDIKVENFSLSPCLKV-----QKQIASGRRYGLVG 87
LE + SQ S K S S+ + S D+++ENF +S +V +A GRRYGLVG
Sbjct: 151 LEEASASQAGSRKESRLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVG 210
Query: 88 PNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSK 147
NG GKTTLL+ +ATR+L +P+ I LL+ EQEV D A+ VL +D R LL++ +
Sbjct: 211 RNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDTVREDLLRQERE 270
Query: 148 LEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDELKSIEADAAE 207
L ++ ++A + G +L E+Y +L+ IEAD A
Sbjct: 271 L-----------SLRIAAGR---------------AEGSEAAQLAEIYGKLEEIEADKAP 304
Query: 208 PRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
RA ILAGLGFT +MQ++ T+EFSGGWRMR++LARALF P LLLLDEPTN LD
Sbjct: 305 ARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLD 359
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E R L G + E+ + SGG + RV+ A+ P +LDEPTNHLD
Sbjct: 587 EEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLD 642
>sp|Q66H39|ABCF3_RAT ATP-binding cassette sub-family F member 3 OS=Rattus norvegicus
GN=Abcf3 PE=2 SV=1
Length = 709
Score = 171 bits (432), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 138/235 (58%), Gaps = 33/235 (14%)
Query: 35 LENFTVSQ--SSKASSKRSTVDDNSVDIKVENFSLSPCLKV-----QKQIASGRRYGLVG 87
LE + SQ S K S S+ + S D+++ENF +S +V +A GRRYGLVG
Sbjct: 151 LEEASASQAGSRKESRLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVG 210
Query: 88 PNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSK 147
NG GKTTLL+ +ATR+L +P+ I LL+ EQEV D A+ VL +D R LL++
Sbjct: 211 RNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDTIREDLLRQ--- 267
Query: 148 LEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDELKSIEADAAE 207
+ +++ ++A + G L EVY +L+ IEAD A
Sbjct: 268 --------ERGLSLKIAAGR---------------AEGSEAALLAEVYTKLEEIEADKAP 304
Query: 208 PRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
RA ILAGLGFT +MQ++ T+EFSGGWRMR++LARALF P LLLLDEPTN LD
Sbjct: 305 ARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLD 359
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E R L G + E+ + SGG + RV+ A+ P +LDEPTNHLD
Sbjct: 587 EEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLD 642
>sp|Q9NUQ8|ABCF3_HUMAN ATP-binding cassette sub-family F member 3 OS=Homo sapiens GN=ABCF3
PE=1 SV=2
Length = 709
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 136/236 (57%), Gaps = 35/236 (14%)
Query: 35 LENFTVSQ--SSKASSKRSTVDDNSVDIKVENFSLSPCLKV-----QKQIASGRRYGLVG 87
LE + SQ S K S S+ + S D+++ENF +S +V +A GRRYGLVG
Sbjct: 151 LEEASASQAGSRKESRLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVG 210
Query: 88 PNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSK 147
NG GKTTLL+ +ATR+L +P+ I LL+ EQEV D A+ VL +D R LL+ +
Sbjct: 211 RNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDSVREDLLRRERE 270
Query: 148 L-EQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDELKSIEADAA 206
L Q+ A R E G L E+Y +L+ IEAD A
Sbjct: 271 LTAQIAAG--------------------------RAE-GSEAAELAEIYAKLEEIEADKA 303
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
RA ILAGLGFT +MQ++ T+EFSGGWRMR++LARALF P LLLLDEPTN LD
Sbjct: 304 PARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLD 359
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E R L G + E+ + SGG + RV+ A+ P +LDEPTNHLD
Sbjct: 587 EEEYRHQLGRYGISGELAMRPLASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLD 642
>sp|Q5R9Z5|ABCF3_PONAB ATP-binding cassette sub-family F member 3 OS=Pongo abelii GN=ABCF3
PE=2 SV=1
Length = 709
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 136/235 (57%), Gaps = 33/235 (14%)
Query: 35 LENFTVSQ--SSKASSKRSTVDDNSVDIKVENFSLSPCLKV-----QKQIASGRRYGLVG 87
LE + SQ S K S S+ + S D+++ENF +S +V +A GRRYGLVG
Sbjct: 151 LEEASASQAGSRKESRLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVG 210
Query: 88 PNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSK 147
NG GKTTLL+ +ATR+L +P+ I LL+ EQEV D A+ VL +D R LL+ +
Sbjct: 211 RNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAEDDTPALQSVLESDSVREDLLRRERE 270
Query: 148 LEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDELKSIEADAAE 207
L A+ RV+ G L E+Y +L+ IEAD A
Sbjct: 271 LSAHIAA-------------GRVE-------------GSEAAELAEIYAKLEEIEADKAP 304
Query: 208 PRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
RA ILAGLGFT +MQ++ T+EFSGGWRMR++LARALF P LLLLDEPTN LD
Sbjct: 305 ARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLD 359
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E R L G + E+ + SGG + RV+ A+ P +LDEPTNHLD
Sbjct: 587 EEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLD 642
>sp|Q8H0V6|AB3F_ARATH ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3
PE=2 SV=1
Length = 715
Score = 164 bits (414), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 150/263 (57%), Gaps = 31/263 (11%)
Query: 8 KEKKQLKKQSKYQQELSALSGGQGTDELENFTVSQSSKASSKRSTVDDNSVDIKVENFSL 67
K+K +++ +YQQ ++ + + + +V+ + S DI ++NF++
Sbjct: 132 KKKDDRQRELQYQQHVAEMEAAKAG--MPTVSVNHDTGGGSAIR-------DIHMDNFNV 182
Query: 68 SPC---LKVQKQI--ASGRRYGLVGPNGHGKTTLLRHIATRAL-AIPSSIDLLYCEQEVE 121
S L V I + GR YGLVG NG GKTT LR++A A+ IP++ +L+ EQEV
Sbjct: 183 SVGGRDLIVDGSITLSFGRHYGLVGRNGTGKTTFLRYMAMHAIEGIPTNCQILHVEQEVV 242
Query: 122 ASDDSAVNIVLSADKNRVKLLKECSKL--EQVEASDDSAVNIVLSADKNRVKLLKECSKL 179
+A+ VL+ D R KLL+E ++ +Q E + +A + + + D L+ +
Sbjct: 243 GDKTTALQCVLNTDIERTKLLEEEIQILAKQRETEEPTAKDGMPTKDTVEGDLMSQ---- 298
Query: 180 ERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRV 239
RL E+Y L +I+A AE RA ILAGL FT EMQ K+T FSGGWRMR+
Sbjct: 299 ----------RLEEIYKRLDAIDAYTAEARAASILAGLSFTPEMQLKATNTFSGGWRMRI 348
Query: 240 SLARALFLEPTLLLLDEPTNHLD 262
+LARALF+EP LLLLDEPTNHLD
Sbjct: 349 ALARALFIEPDLLLLDEPTNHLD 371
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 205 AAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E + R L LG T + + SGG + RV+ A+ F +P LLLLDEP+NHLD
Sbjct: 597 VPEQKLRSHLGSLGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHLLLLDEPSNHLD 654
>sp|Q9UG63|ABCF2_HUMAN ATP-binding cassette sub-family F member 2 OS=Homo sapiens GN=ABCF2
PE=1 SV=2
Length = 623
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 133/237 (56%), Gaps = 39/237 (16%)
Query: 32 TDELENFTVSQSS-KASSKRSTVDDNSVDIKVENFSLSPCLK-----VQKQIASGRRYGL 85
T ELE+F + +++ +A + NS D+ + N SL+ + + ++ SGRRYGL
Sbjct: 57 TKELEDFEMKKAAARAVTGVLASHPNSTDVHIINLSLTFHGQELLSDTKLELNSGRRYGL 116
Query: 86 VGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKEC 145
+G NG GK+ LL I R + IP ID+ + +E+ SD + ++ V+ D R L KE
Sbjct: 117 IGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSDKTPLHCVMEVDTERAMLEKEA 176
Query: 146 SKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDELKSIEADA 205
+L A +D+ EC K L E+Y+ L+ ++AD
Sbjct: 177 ERL----AHEDA-----------------ECEK------------LMELYERLEELDADK 203
Query: 206 AEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
AE RA RIL GLGFT MQ K K+FSGGWRMRV+LARALF+ P +LLLDEPTNHLD
Sbjct: 204 AEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLD 260
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 191 LTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT 250
+ + Y E+K E R+I+ G T + Q + S G + RV LA + P
Sbjct: 483 MMKCYPEIKEKE------EMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPH 536
Query: 251 LLLLDEPTNHLD 262
+L LDEPTNHLD
Sbjct: 537 MLFLDEPTNHLD 548
>sp|O59672|YB89_SCHPO Uncharacterized ABC transporter ATP-binding protein C29A3.09c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC29A3.09c PE=3 SV=1
Length = 736
Score = 160 bits (405), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 123/186 (66%), Gaps = 4/186 (2%)
Query: 77 IASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADK 136
+A GRRYGL G NG GK+TLLR ++ R +AIP+ I +L+ EQE+ D A+ VL AD
Sbjct: 205 LAQGRRYGLTGRNGIGKSTLLRALSRREIAIPTHITILHVEQEMTGDDTPALQSVLDADV 264
Query: 137 NRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYD 196
R L+++ K+ ++ + + LS D+ + + + ERDE LRL ++ +
Sbjct: 265 WRKYLIQDQEKITNRLSTIEKELE-ELSKDQTADQAISRRLERERDEL---DLRLLDIQN 320
Query: 197 ELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDE 256
+L +++D AE RA ILAGLGFT+EMQ +TK FSGGWRMR+SLARALF +P LLLLDE
Sbjct: 321 KLSEMDSDRAESRAATILAGLGFTQEMQSHATKTFSGGWRMRLSLARALFCQPDLLLLDE 380
Query: 257 PTNHLD 262
P+N LD
Sbjct: 381 PSNMLD 386
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 206 AEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E RR L G + + + SGG + RV+ A P +L+LDEPTNHLD
Sbjct: 612 GEEEYRRHLGAFGVSGPLALQKMITLSGGQKSRVAFACLGLQNPHILILDEPTNHLD 668
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 59 DIKVENFSLSPCLK-VQKQIASGRRYGLVGPNGHGKTTLLR 98
D+ E P LK V + R G+VGPNG GK+T+L+
Sbjct: 522 DVNFEYVPGHPILKHVDIDVQMDSRIGVVGPNGAGKSTMLK 562
>sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1 OS=Arabidopsis thaliana GN=ABCF1
PE=1 SV=1
Length = 595
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 124/211 (58%), Gaps = 37/211 (17%)
Query: 57 SVDIKVENFSLSP-----CLKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSI 111
S DI++E+ S++ + ++ GRRYGL+G NG GK+TLL I R + IP +
Sbjct: 66 SRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGRREIPIPDQM 125
Query: 112 DLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVK 171
D+ + E+EA+D S++ V+S D+ R++L KE L Q
Sbjct: 126 DIYHLSHEIEATDMSSLEAVVSCDEERLRLEKEVEILVQ--------------------- 164
Query: 172 LLKECSKLERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEF 231
+D+ G RL +Y+ L +++A+ AE RA IL GLGF KEMQ K TK+F
Sbjct: 165 ---------QDDGGGE--RLQSIYERLDAMDAETAEKRAAEILFGLGFDKEMQAKKTKDF 213
Query: 232 SGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
SGGWRMR++LARALF+ PT+LLLDEPTNHLD
Sbjct: 214 SGGWRMRIALARALFIMPTILLLDEPTNHLD 244
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E + R + G T + Q K S G R RV A + +P +LLLDEPTNHLD
Sbjct: 475 EEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLD 530
>sp|Q99LE6|ABCF2_MOUSE ATP-binding cassette sub-family F member 2 OS=Mus musculus GN=Abcf2
PE=2 SV=1
Length = 628
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 132/237 (55%), Gaps = 39/237 (16%)
Query: 32 TDELENFTVSQSS-KASSKRSTVDDNSVDIKVENFSLSPCLK-----VQKQIASGRRYGL 85
T ELE+F + +++ +A + NS D+ + N SL+ + + ++ SGRRYGL
Sbjct: 62 TKELEDFEMKKAAARAVTGVLASHPNSTDVHIINLSLTFHGQELLSDTKLELNSGRRYGL 121
Query: 86 VGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKEC 145
+G NG GK+ LL I R + IP ID+ + +E+ S+ + + V+ D R L +E
Sbjct: 122 IGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSEKTPLQCVMEVDTERAMLEREA 181
Query: 146 SKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDELKSIEADA 205
+L A +D+ EC K L E+Y+ L+ ++AD
Sbjct: 182 ERL----AHEDA-----------------ECEK------------LMELYERLEELDADK 208
Query: 206 AEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
AE RA RIL GLGFT MQ K K+FSGGWRMRV+LARALF+ P +LLLDEPTNHLD
Sbjct: 209 AEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLD 265
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 191 LTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT 250
+ + Y E+K E R+I+ G T + Q + S G + RV LA + P
Sbjct: 488 MMKCYPEIKEKE------EMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPH 541
Query: 251 LLLLDEPTNHLD 262
+L LDEPTNHLD
Sbjct: 542 MLFLDEPTNHLD 553
>sp|P43535|GCN20_YEAST Protein GCN20 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GCN20 PE=1 SV=1
Length = 752
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 152/279 (54%), Gaps = 38/279 (13%)
Query: 3 KKLSHKEKKQLKKQSK-----YQQELSALSGGQGTDELENFTVS------QSSKASSKRS 51
KKL+ E+K KK +K + E S L Q ++ ++F + SS SK
Sbjct: 140 KKLAKAEQKIAKKVAKRNNKFVKYEASKLINDQKEEDYDSFFLQINPLEFGSSAGKSK-- 197
Query: 52 TVDDNSVDIKVENFSLSP------CLKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRAL 105
DI ++ F L Q ++ G RYGLVG NG GK+TLLR ++ R L
Sbjct: 198 -------DIHIDTFDLYVGDGQRILSNAQLTLSFGHRYGLVGQNGIGKSTLLRALSRREL 250
Query: 106 AIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSKL-EQVEASDDSAVNIVLS 164
+P + +L+ EQE+ D A+ VL AD R +LL E +K+ E+++ D VL
Sbjct: 251 NVPKHVSILHVEQELRGDDTKALQSVLDADVWRKQLLSEEAKINERLKEMD------VLR 304
Query: 165 ADKNRVKLLKECSKLERD-ESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEM 223
+ L E KL+ + E DN L ++ D+L +E+D AE RA IL GLGF+ E
Sbjct: 305 QEFEEDSL--EVKKLDNEREDLDNHL--IQISDKLVDMESDKAEARAASILYGLGFSTEA 360
Query: 224 QEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
Q++ T FSGGWRMR+SLARALF +P LLLLDEP+N LD
Sbjct: 361 QQQPTNSFSGGWRMRLSLARALFCQPDLLLLDEPSNMLD 399
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 211 RRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
RR L G T + + + SGG + RV+ A P +L+LDEP+NHLD
Sbjct: 631 RRHLGSFGITGTLGLQKMQLLSGGQKSRVAFAALCLNNPHILVLDEPSNHLD 682
>sp|Q2KJA2|ABCF2_BOVIN ATP-binding cassette sub-family F member 2 OS=Bos taurus GN=ABCF2
PE=2 SV=1
Length = 625
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 125/237 (52%), Gaps = 39/237 (16%)
Query: 32 TDELENFTVSQSS-KASSKRSTVDDNSVDIKVENFSLSPCLK-----VQKQIASGRRYGL 85
T ELE+F + +++ +A + NS D + N SL+ + + ++ SGRRYGL
Sbjct: 59 TKELEDFEMKKAAARAVTGVLASHPNSTDAHIINLSLTFHGQELLSDTKLELNSGRRYGL 118
Query: 86 VGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKEC 145
+G NG GK+ LL I R + IP ID+ + +E+ SD + + V+ D R L +E
Sbjct: 119 IGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSDKTPLQCVMEVDTERAMLEREA 178
Query: 146 SKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDELKSIEADA 205
+L +A EC KL L+ ++AD
Sbjct: 179 ERLAHEDA---------------------ECEKLLELYE------------RLEELDADK 205
Query: 206 AEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
AE RA RIL GLGFT MQ K K+FSGGWRMRV+LARALF+ P +LLLDEPTNHLD
Sbjct: 206 AEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLD 262
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 191 LTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT 250
+ + Y E+K E R+I+ G T + Q + S G + RV LA + P
Sbjct: 485 MMKCYPEIKEKE------EMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPH 538
Query: 251 LLLLDEPTNHLD 262
+L LDEPTNHLD
Sbjct: 539 MLFLDEPTNHLD 550
>sp|Q8T6B4|ABCF4_DICDI ABC transporter F family member 4 OS=Dictyostelium discoideum
GN=abcF4 PE=3 SV=1
Length = 1142
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 120/211 (56%), Gaps = 28/211 (13%)
Query: 59 DIKVENFSLSPCLKV-----QKQIASGRRYGLVGPNGHGKTTLLRHIATR-ALAIPSSID 112
DIK +N LS ++ +A G++YG VG NG GK+TL++ IA R + I +
Sbjct: 603 DIKFDNLILSVPGRILLNNASLTLAYGQKYGFVGRNGIGKSTLVKKIAMRDEITIAPHLR 662
Query: 113 LLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKL 172
+LY EQEV D + ++ VL+AD+ R LL E L ++E + S
Sbjct: 663 VLYVEQEVTGDDTTPLDCVLAADEERKWLLDEEKVLTELEKVNPS--------------- 707
Query: 173 LKECSKLERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFT-KEMQEKSTKEF 231
+ D L ++YD LK I+AD A RA IL GLGFT +E+ K ++++
Sbjct: 708 ------WQFDPRQKRNYSLRDIYDRLKEIDADKASIRAANILIGLGFTFEEISVKKSRDY 761
Query: 232 SGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
SGGWRMR++LARALF +P +LLLDEP+NHLD
Sbjct: 762 SGGWRMRIALARALFCKPEVLLLDEPSNHLD 792
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 27/52 (51%)
Query: 211 RRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
R L G + SGG + RV LA + EP +LLLDEPTNHLD
Sbjct: 1022 RNHLGRFGICNSLPLHKITTLSGGQKSRVILAELAWAEPHILLLDEPTNHLD 1073
>sp|O42943|YBP8_SCHPO Uncharacterized ABC transporter ATP-binding protein C16H5.08c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16H5.08c PE=1 SV=1
Length = 618
Score = 140 bits (354), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 124/211 (58%), Gaps = 36/211 (17%)
Query: 57 SVDIKVENFSLSPCLKVQKQIAS-----GRRYGLVGPNGHGKTTLLRHIATRALAIPSSI 111
S DIK+++++LS ++ + A+ G+RYGL+G NG GK+T L +A R + P I
Sbjct: 73 SRDIKIDSYTLSFHGRLLIENATIELNHGQRYGLLGDNGSGKSTFLESVAARDVEYPEHI 132
Query: 112 DLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVK 171
D E E SD +AV+ ++ + K++V+ L+ +++E++ +DD V+ VL K
Sbjct: 133 DSYLLNAEAEPSDVNAVDYIIQSAKDKVQKLE--AEIEELSTADD--VDDVLLESK---- 184
Query: 172 LLKECSKLERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEF 231
Y+EL ++ E +A IL GLGFT+EM K TK+
Sbjct: 185 -----------------------YEELDDMDPSTFEAKAAMILHGLGFTQEMMAKPTKDM 221
Query: 232 SGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
SGGWRMRV+L+RALF++P+LLLLDEPTNHLD
Sbjct: 222 SGGWRMRVALSRALFIKPSLLLLDEPTNHLD 252
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 211 RRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
R +L G + Q + S G + RV A +P +LLLDEPTNHLD
Sbjct: 493 RSVLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLD 544
>sp|Q8T6B7|ABCF2_DICDI ABC transporter F family member 2 OS=Dictyostelium discoideum
GN=abcF2 PE=3 SV=1
Length = 593
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 36/213 (16%)
Query: 55 DNSVDIKVENFSLSPCLK-----VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPS 109
++S D+K+E +L+ K +I GRRYGL+G NG GK+T + +A R L IP
Sbjct: 48 ESSRDVKIEQVTLTFHGKELLSDTTVEINFGRRYGLIGQNGCGKSTFFQCLAVRELPIPE 107
Query: 110 SIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNR 169
ID+ + +E S+ +A+ V+ DD+ +
Sbjct: 108 HIDIFHLSEEAHPSERTALQSVI----------------------DDA---------EKE 136
Query: 170 VKLLKECSKLERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTK 229
VK L+ + +E G L +VY+ L++++ PRA IL GLGFT + K TK
Sbjct: 137 VKRLEVLEERLLEEQGPESEELFDVYERLENLDPTTFVPRASEILIGLGFTSQTMLKKTK 196
Query: 230 EFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
+ SGGWRMRVSLA+ALF++PTLLLLDEPTNHLD
Sbjct: 197 DLSGGWRMRVSLAKALFIKPTLLLLDEPTNHLD 229
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 211 RRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
RR + G T + Q ++ S G + R+ P LLLLDEPTNHLD
Sbjct: 467 RREIGRFGVTGKAQTEAIGCMSDGIKSRLIFCLMALENPHLLLLDEPTNHLD 518
>sp|Q9USH9|YJQ1_SCHPO Uncharacterized ABC transporter ATP-binding protein C825.01
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC825.01 PE=1 SV=1
Length = 822
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 116/212 (54%), Gaps = 36/212 (16%)
Query: 56 NSVDIKVENFSLSPCLKV-----QKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSS 110
NS D++VE S+S K+ + + +GRRYGL+ PNG GK+TLL IA + PSS
Sbjct: 272 NSRDLQVEKLSVSAWGKLLIKDSELNLINGRRYGLIAPNGSGKSTLLHAIACGLIPTPSS 331
Query: 111 IDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRV 170
+D ++E ++ + V VL ++ K L+ + +++ DKN V
Sbjct: 332 LDFYLLDREYIPNELTCVEAVLDINEQERKHLEAMME------------DLLDDPDKNAV 379
Query: 171 KLLKECSKLERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKE 230
+L Q RLT+ +E + ++ R +IL GL FT EM K T E
Sbjct: 380 EL------------DTIQTRLTD-------LETENSDHRVYKILRGLQFTDEMIAKRTNE 420
Query: 231 FSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
SGGWRMR++LAR LF++PTL++LDEPTNHLD
Sbjct: 421 LSGGWRMRIALARILFIKPTLMMLDEPTNHLD 452
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 69/182 (37%), Gaps = 60/182 (32%)
Query: 82 RYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKL 141
R LVGPNG GKTTL++ I
Sbjct: 622 RVALVGPNGAGKTTLIKLI----------------------------------------- 640
Query: 142 LKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDN-QLRLTEVYDELKS 200
LE+V+ S S V+ R+ L + GD +RL+ V + L++
Sbjct: 641 ------LEKVQPSTGS----VVRHHGLRLALFNQ-------HMGDQLDMRLSAV-EWLRT 682
Query: 201 IEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNH 260
+ E RRI+ G T + Q + S G R RV A +P +LLLDEPTN
Sbjct: 683 KFGNKPEGEMRRIVGRYGLTGKSQVIPMGQLSDGQRRRVLFAFLGMTQPHILLLDEPTNA 742
Query: 261 LD 262
LD
Sbjct: 743 LD 744
>sp|P40024|ARB1_YEAST ABC transporter ATP-binding protein ARB1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ARB1 PE=1
SV=1
Length = 610
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 36/213 (16%)
Query: 55 DNSVDIKVENFSLSPCLKVQKQ-----IASGRRYGLVGPNGHGKTTLLRHIATRALAIPS 109
+ S DIK+ + SL KV Q + GRRYGL+G NG GK+T L+ +ATR IP
Sbjct: 77 ETSRDIKLSSVSLLFHGKVLIQDSGLELNYGRRYGLLGENGCGKSTFLKALATREYPIPE 136
Query: 110 SIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNR 169
ID+ ++ E S+ SA++ V++ ++ +K R
Sbjct: 137 HIDIYLLDEPAEPSELSALDYVVTEAQHELK----------------------------R 168
Query: 170 VKLLKECSKLERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTK 229
++ L E + LE G L +Y+ + S++ D E RA IL GLGF K+ K TK
Sbjct: 169 IEDLVEKTILE---DGPESELLEPLYERMDSLDPDTFESRAAIILIGLGFNKKTILKKTK 225
Query: 230 EFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
+ SGGW+MRV+LA+ALF++PTLLLLD+PT HLD
Sbjct: 226 DMSGGWKMRVALAKALFVKPTLLLLDDPTAHLD 258
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 187 NQLRLTE-----VYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSL 241
+QL LT+ V D+ +I D R + L G T E Q S G R RV
Sbjct: 469 DQLDLTKSALEFVRDKYSNISQDFQFWRGQ--LGRYGLTGEGQTVQMATLSEGQRSRVVF 526
Query: 242 ARALFLEPTLLLLDEPTNHLD 262
A +P +LLLDEPTN LD
Sbjct: 527 ALLALEQPNVLLLDEPTNGLD 547
>sp|P63389|YHES_ECOLI Uncharacterized ABC transporter ATP-binding protein YheS
OS=Escherichia coli (strain K12) GN=yheS PE=1 SV=1
Length = 637
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 91/192 (47%), Gaps = 40/192 (20%)
Query: 77 IASGRRYGLVGPNGHGKTTLLRHIATR------ALAIPSSIDLLYCEQEVEASDDSAVNI 130
I G++ GLVG NG GK+TLL + + P S L + QE A +A+
Sbjct: 24 INPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEY 83
Query: 131 VLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLR 190
V+ D+ + Q+EA A +E D
Sbjct: 84 VIDGDR----------EYRQLEAQLHDA-----------------------NERNDGH-A 109
Query: 191 LTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT 250
+ ++ +L +I+A + RA +L GLGF+ E E+ +FSGGWRMR++LA+AL
Sbjct: 110 IATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSD 169
Query: 251 LLLLDEPTNHLD 262
LLLLDEPTNHLD
Sbjct: 170 LLLLDEPTNHLD 181
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E + R L G GF + + T+ FSGG + R+ LA ++ P LLLLDEPTNHLD
Sbjct: 407 EQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLD 462
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 73 VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDL 113
++ + G R GL+G NG GK+TL++ +A + I L
Sbjct: 331 IKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGL 371
>sp|P63390|YHES_ECO57 Uncharacterized ABC transporter ATP-binding protein YheS
OS=Escherichia coli O157:H7 GN=yheS PE=3 SV=1
Length = 637
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 91/192 (47%), Gaps = 40/192 (20%)
Query: 77 IASGRRYGLVGPNGHGKTTLLRHIATR------ALAIPSSIDLLYCEQEVEASDDSAVNI 130
I G++ GLVG NG GK+TLL + + P S L + QE A +A+
Sbjct: 24 INPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEY 83
Query: 131 VLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLR 190
V+ D+ + Q+EA A +E D
Sbjct: 84 VIDGDR----------EYRQLEAQLHDA-----------------------NERNDGH-A 109
Query: 191 LTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT 250
+ ++ +L +I+A + RA +L GLGF+ E E+ +FSGGWRMR++LA+AL
Sbjct: 110 IATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSD 169
Query: 251 LLLLDEPTNHLD 262
LLLLDEPTNHLD
Sbjct: 170 LLLLDEPTNHLD 181
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E + R L G GF + + T+ FSGG + R+ LA ++ P LLLLDEPTNHLD
Sbjct: 407 EQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLD 462
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 73 VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDL 113
++ + G R GL+G NG GK+TL++ +A + I L
Sbjct: 331 IKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGL 371
>sp|P44808|Y658_HAEIN Uncharacterized ABC transporter ATP-binding protein HI_0658
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=HI_0658 PE=1 SV=1
Length = 638
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 40/192 (20%)
Query: 77 IASGRRYGLVGPNGHGKTTLLRHIATRALA------IPSSIDLLYCEQEVEASDDSAVNI 130
I ++ GLVG NG GK++L + + P++ + + QE A D SA++
Sbjct: 24 INPKQKVGLVGKNGCGKSSLFALLKKELMPEGGEVNYPANWRVSWVNQETPALDISAIDY 83
Query: 131 VLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLR 190
V+ D+ E +L+Q KLER ++
Sbjct: 84 VIQGDR-------EYCRLQQ---------------------------KLERANERNDGNA 109
Query: 191 LTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT 250
+ ++ +L++++A + RA +L GLGF++E + K FSGGWRMR++LA+AL
Sbjct: 110 IARIHGQLETLDAWTIQSRAASLLHGLGFSQEETIQPVKAFSGGWRMRLNLAQALLCPSD 169
Query: 251 LLLLDEPTNHLD 262
LLLLDEPTNHLD
Sbjct: 170 LLLLDEPTNHLD 181
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 198 LKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEP 257
++ + + E + R L F + ++ K FSGG + R+ LA ++ P LLLLDEP
Sbjct: 402 MQKLAPEQTEQQVRDYLGSFAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEP 461
Query: 258 TNHLD 262
TNHLD
Sbjct: 462 TNHLD 466
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 72 KVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDL 113
K++ + G R GL+G NG GK+TL++ +A A+ ++ L
Sbjct: 334 KIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTALSGTVQL 375
>sp|O94489|EF3_SCHPO Elongation factor 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=tef3 PE=1 SV=1
Length = 1047
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 79/187 (42%), Gaps = 70/187 (37%)
Query: 80 GRRYGLVGPNGHGKTTLLRHIATRAL-AIPSSIDLLYCEQEVEASDDSAVNIVLSADKNR 138
GRRYGL GPNG GK+TL+R I + P+ + +Y E +++ S+ AD
Sbjct: 460 GRRYGLCGPNGSGKSTLMRAIVNGQVEGFPTHLRTVYVEHDIDESE---------ADTPS 510
Query: 139 VKLLKECSKLEQVEASDDSAVNIVLSADKNR---VKLLKECSKLERDESGDNQLRLTEVY 195
V + + D AV I K+R VK LKE S
Sbjct: 511 VDFILQ-----------DPAVPI-----KDRDEIVKALKENS------------------ 536
Query: 196 DELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLD 255
FT E+ SGGW+M+++L RA+F P +LLLD
Sbjct: 537 -----------------------FTDELINMPIGSLSGGWKMKLALTRAMFKNPDILLLD 573
Query: 256 EPTNHLD 262
EPTNHLD
Sbjct: 574 EPTNHLD 580
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 60/263 (22%)
Query: 60 IKVENFSLS------PCLK-VQKQIASGRRYGLVGPNGHGKTTLLR-------------- 98
IKV++ S P L + Q++ R ++GPNG GK+TL++
Sbjct: 673 IKVQHMSFQYPGTSKPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGELLPTVGEIY 732
Query: 99 --------HIATRALAI----PSSIDLLYCEQEVEASDD-----SAVNIVLSAD----KN 137
++A A P Y + ++ +D A ++ AD KN
Sbjct: 733 QHENCRIAYVAQAAFTHLGHHPDKTPSEYIQWRFQSGEDLEAMDKASRVISEADEEAMKN 792
Query: 138 RV--------KLLKECSKLE-----QVEASDDSAVNIVLSADKNRVKLLKECSKLERDES 184
++ K+L S+ + + E S NI + +++ + + + L R E
Sbjct: 793 KIFKIEGTQRKILGIHSRRKLKNSYEYECSFLVGENIGMKSERWVPMMSSDNAWLPRGEL 852
Query: 185 GDNQLRLTEVYDELKSIEADAAEPRARRIL----AGLGFTKEMQEKS-TKEFSGGWRMRV 239
+ ++ D +++++ P R+ + + LG E+ S K SGG ++++
Sbjct: 853 METHAKMVAEVDRAEALKSGQFRPLVRKEIEEHCSLLGLDAELVSHSRIKGLSGGQKVKL 912
Query: 240 SLARALFLEPTLLLLDEPTNHLD 262
LA +L P +++LDEPTN+LD
Sbjct: 913 VLAACTWLRPHVIVLDEPTNYLD 935
>sp|Q8SRV5|ABCF3_ENCCU Probable ATP-binding cassette sub-family F member 3 homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU05_1190
PE=3 SV=1
Length = 554
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 44/59 (74%)
Query: 204 DAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
D A A RIL GLGFTK+M K+ ++ SGGWRMR LA+A+ +P LLLLDEPTN+LD
Sbjct: 163 DFAGAEAGRILNGLGFTKDMAVKNMRDLSGGWRMRAHLAKAINADPDLLLLDEPTNYLD 221
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 77 IASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADK 136
I GR+YGLVG NG GKTTLL+ I R IP + + +Q++ D V A+
Sbjct: 112 IVRGRKYGLVGRNGIGKTTLLKAIRKRRFGIPRGMRIYMIKQDLIV--DETVEDFAGAEA 169
Query: 137 NRV 139
R+
Sbjct: 170 GRI 172
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 210 ARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
ARR LA G + + Q T SGG + R+ A L P LL+LDEPTNHLD
Sbjct: 445 ARRALASFGLSVDNQCIGT--LSGGQKSRLGFAIINGLSPNLLVLDEPTNHLD 495
>sp|P0A9U3|YBIT_ECOLI Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli (strain K12) GN=ybiT PE=3 SV=1
Length = 530
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 65 FSLSPCLK-VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEAS 123
F P + + + G RYGL+G NG GK+T ++ + DL
Sbjct: 11 FGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGG---------DL---------- 51
Query: 124 DDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVN----IVLSADKNRVKLLKECSKL 179
+ + N+ L ++ KL ++ E+ D + + +++R+ L E S+
Sbjct: 52 EPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEE 111
Query: 180 ERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRV 239
+ + D +++ E ++ +AE RA +L G+G E E + GW++RV
Sbjct: 112 DGYKVADLEVKYGE-------MDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRV 164
Query: 240 SLARALFLEPTLLLLDEPTNHLD 262
LA+ALF +P +LLLDEPTN+LD
Sbjct: 165 LLAQALFADPDILLLDEPTNNLD 187
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E R IL L F+++ +K K SGG + R+ + + +P +L++DEPTNHLD
Sbjct: 415 EQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLD 470
>sp|P0A9U4|YBIT_ECOL6 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ybiT PE=3 SV=1
Length = 530
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 65 FSLSPCLK-VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEAS 123
F P + + + G RYGL+G NG GK+T ++ + DL
Sbjct: 11 FGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGG---------DL---------- 51
Query: 124 DDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVN----IVLSADKNRVKLLKECSKL 179
+ + N+ L ++ KL ++ E+ D + + +++R+ L E S+
Sbjct: 52 EPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEE 111
Query: 180 ERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRV 239
+ + D +++ E ++ +AE RA +L G+G E E + GW++RV
Sbjct: 112 DGYKVADLEVKYGE-------MDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRV 164
Query: 240 SLARALFLEPTLLLLDEPTNHLD 262
LA+ALF +P +LLLDEPTN+LD
Sbjct: 165 LLAQALFADPDILLLDEPTNNLD 187
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E R IL L F+++ +K K SGG + R+ + + +P +L++DEPTNHLD
Sbjct: 415 EQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLD 470
>sp|P0A9U5|YBIT_ECO57 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O157:H7 GN=ybiT PE=3 SV=1
Length = 530
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 65 FSLSPCLK-VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEAS 123
F P + + + G RYGL+G NG GK+T ++ + DL
Sbjct: 11 FGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGG---------DL---------- 51
Query: 124 DDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVN----IVLSADKNRVKLLKECSKL 179
+ + N+ L ++ KL ++ E+ D + + +++R+ L E S+
Sbjct: 52 EPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEE 111
Query: 180 ERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRV 239
+ + D +++ E ++ +AE RA +L G+G E E + GW++RV
Sbjct: 112 DGYKVADLEVKYGE-------MDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRV 164
Query: 240 SLARALFLEPTLLLLDEPTNHLD 262
LA+ALF +P +LLLDEPTN+LD
Sbjct: 165 LLAQALFADPDILLLDEPTNNLD 187
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 207 EPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
E R IL L F+++ +K K SGG + R+ + + +P +L++DEPTNHLD
Sbjct: 415 EQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLD 470
>sp|O31716|YKPA_BACSU Uncharacterized ABC transporter ATP-binding protein YkpA
OS=Bacillus subtilis (strain 168) GN=ykpA PE=3 SV=1
Length = 540
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 26/192 (13%)
Query: 73 VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVL 132
V + G YGL+G NG GK+T L+ +L E E + D V
Sbjct: 20 VNIKFTPGNCYGLIGANGAGKSTFLK--------------VLSGEIEPQTGD------VH 59
Query: 133 SADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKE--CSKLERDESGDNQLR 190
+ R+ +LK+ E + + +V+ K ++++E ++ D S ++ +R
Sbjct: 60 MSPGERLAVLKQ----NHFEYEEYEVLKVVIMGHKRLYEVMQEKDAIYMKPDFSDEDGIR 115
Query: 191 LTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT 250
E+ E + AE A +L GLG ++++ K + G +++V LA+ALF +P
Sbjct: 116 AAELEGEFAELNGWEAESEAAILLKGLGISEDLHTKKMADLGGSEKVKVLLAQALFGKPD 175
Query: 251 LLLLDEPTNHLD 262
+LLLDEPTNHLD
Sbjct: 176 VLLLDEPTNHLD 187
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 204 DAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
D +E R L + F+ E K SGG ++R L++A+ +L+LDEPTNHLD
Sbjct: 413 DQSESFLRGFLGRMLFSGEEVHKKANVLSGGEKVRCMLSKAMLSGANILILDEPTNHLD 471
>sp|O14134|ELF1_SCHPO mRNA export factor elf1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=elf1 PE=1 SV=1
Length = 1057
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 77/184 (41%), Gaps = 60/184 (32%)
Query: 80 GRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRV 139
G RYG+VG NG GK+TLLR I D V S D+
Sbjct: 470 GHRYGVVGHNGCGKSTLLRAIG-----------------------DYKVENFPSPDE--- 503
Query: 140 KLLKECSKLEQVEASDDS-AVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDEL 198
+K C ++ D S A+ ++ DK + + + R E+ D
Sbjct: 504 --VKTCFVAHSLQGEDTSMAILDFVAQDKALLTM-----NVTRQEAADA----------- 545
Query: 199 KSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPT 258
L +GFT EMQE SGGW+M++ LARA+ + +LLLDEPT
Sbjct: 546 ---------------LHSVGFTAEMQENPVASLSGGWKMKLELARAMLQKADILLLDEPT 590
Query: 259 NHLD 262
NHLD
Sbjct: 591 NHLD 594
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 231 FSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
SGG +++V +A L+ P LL+LDEPTN LD
Sbjct: 911 LSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942
>sp|P25997|EF3_CANAL Elongation factor 3 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=CEF3 PE=1 SV=2
Length = 1050
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 78/194 (40%), Gaps = 67/194 (34%)
Query: 72 KVQKQIASGRRYGLVGPNGHGKTTLLRHIATRAL-AIPSS--IDLLYCEQEVEASDDSAV 128
K Q ++ RRYGL GPNG GK+TL+R IA + P+ +Y E +++ +
Sbjct: 451 KTQFRLKRNRRYGLCGPNGAGKSTLMRAIANGQVEGFPTQDECKTVYVEHDIDGTH---- 506
Query: 129 NIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQ 188
+D + V V+ E G+
Sbjct: 507 -------------------------ADTTVVEFVI-------------------EDGEVG 522
Query: 189 LRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLE 248
L V D+L+ F+ EM + SGGW+M+++LARA+
Sbjct: 523 LTKDVVVDKLRE----------------FNFSDEMINMPIQSLSGGWKMKLALARAVLKN 566
Query: 249 PTLLLLDEPTNHLD 262
+LLLDEPTNHLD
Sbjct: 567 ADILLLDEPTNHLD 580
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 179 LERDESGDNQLRLTEVYDELKSIEADAAEPRARRIL----AGLGFTKEMQEKS-TKEFSG 233
L R E + +L D +++ + P R+ + A LG E+ S + SG
Sbjct: 845 LPRGELMETHAKLVAEVDMKEALASGQFRPLTRKEIEEHCAMLGLDAELVSHSRIRGLSG 904
Query: 234 GWRMRVSLARALFLEPTLLLLDEPTNHLD 262
G ++++ LA + P L++LDEPTN+LD
Sbjct: 905 GQKVKLVLAACTWQRPHLIVLDEPTNYLD 933
>sp|Q9LV93|AB5F_ARATH ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5
PE=2 SV=1
Length = 692
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 45/255 (17%)
Query: 30 QGTDELENFTVSQSSKASSKRSTVDDNSVD--------IKVENFSLS----PCLK-VQKQ 76
Q DE+E+ Q S+ S R +S + +K+EN S LK V +
Sbjct: 60 QRQDEIESLFSKQPSQQDSDRKRNGKSSKNGASGISSGVKLENIRKSYKGVTVLKDVTWE 119
Query: 77 IASGRRYGLVGPNGHGKTTLLRHIATR-------ALAIPSSIDLLYCEQEVEASDDSAVN 129
+ G + GLVG NG GKTT LR I + + ++ + + QE E S V
Sbjct: 120 VKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMKVAFLSQEFEVSMSKTVR 179
Query: 130 I-VLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRV-KLLKECSKLERDESGDN 187
++A K +++ KLE+V+ + + +V+ D + + +LL E L+R
Sbjct: 180 EEFMTAFKEEMEI---TEKLEKVQKAIEGSVD-----DLDLMGRLLDEFDLLQR------ 225
Query: 188 QLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFL 247
+++ D+ + + +++ LGF E ++ FSGGW+MR+SL + L
Sbjct: 226 ---------RAQAVNLDSVDAKISKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQ 276
Query: 248 EPTLLLLDEPTNHLD 262
+P LLLLDEPTNHLD
Sbjct: 277 DPDLLLLDEPTNHLD 291
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 59/218 (27%)
Query: 45 KASSKRSTVDDNSVDIKVENFSLSPCLKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRA 104
+ +S RS V+ ++D E+ L K I G + ++GPNG GK+TLL+ I
Sbjct: 417 RGTSGRSVVNVKNIDFGFEDKMLFK--KANLSIERGEKIAILGPNGCGKSTLLKLIM--G 472
Query: 105 LAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLS 164
L P +++ E V + EQ +A VL
Sbjct: 473 LEKPVKGEVILGEHNVLPN-----------------------YFEQNQAE-------VLD 502
Query: 165 ADKNRVKLLKECSKLERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQ 224
DK ++ + E ++ R D++K + L F +M
Sbjct: 503 LDKTVLETVCEAAEDWRS-------------DDIKGL------------LGRCNFKADML 537
Query: 225 EKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
++ SGG + R++ + + TLL+LDEPTNHLD
Sbjct: 538 DRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLD 575
>sp|Q9FIB4|AB2F_ARATH ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2
PE=3 SV=2
Length = 678
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 120/254 (47%), Gaps = 42/254 (16%)
Query: 26 LSGGQGTDELENFTVSQSSKASSKRSTVDDNSVD--IKVENFSLS----PCLK-VQKQIA 78
+S ELE+ +S K SK+S +S+ +++EN S S LK V ++
Sbjct: 49 VSAASSNSELESL-LSTDRKLISKQSNNGASSISSGVRLENISKSYEGITVLKDVTWEVK 107
Query: 79 SGRRYGLVGPNGHGKTTLLRHIATR-------ALAIPSSIDLLYCEQEVEASDDSAVNI- 130
G + GL+G NG GKTT LR I + + ++ + + QE E S V
Sbjct: 108 KGEKVGLIGVNGAGKTTQLRIITGQEEPDSGNVIWAKPNLKVAFLSQEFEVSMGKTVKEE 167
Query: 131 VLSADKNRVKLLKECSKLEQV--EASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQ 188
+ K +++ ++ L++ EA DD + KLL E L+R
Sbjct: 168 FMCTFKEEMEIARKLENLQKAIEEAVDDLEL---------MGKLLDEFDLLQR------- 211
Query: 189 LRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLE 248
R EV +L SI A + ++++ LGF E ++ FS GW+MR+SL + L
Sbjct: 212 -RAQEV--DLDSIHA-----KISKLMSELGFVSEDADRLVASFSSGWQMRMSLGKILLQN 263
Query: 249 PTLLLLDEPTNHLD 262
P LLLLDEPTNHLD
Sbjct: 264 PDLLLLDEPTNHLD 277
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 57/186 (30%)
Query: 77 IASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADK 136
I G + ++GPNG GK+TLL+ I L P +++ E V
Sbjct: 433 IERGEKVAIIGPNGCGKSTLLKLIM--GLEKPMRGEVILGEHNV---------------- 474
Query: 137 NRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYD 196
L + Q EA D DK ++ + E + R D
Sbjct: 475 -----LPNYFEQNQAEAQD---------LDKTVIETVVEAAVDWR-------------ID 507
Query: 197 ELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDE 256
++K++ L F +M ++ SGG + R++ + + TLL+LDE
Sbjct: 508 DIKAL------------LGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 555
Query: 257 PTNHLD 262
PTNHLD
Sbjct: 556 PTNHLD 561
>sp|O05519|YDIF_BACSU Uncharacterized ABC transporter ATP-binding protein YdiF
OS=Bacillus subtilis (strain 168) GN=ydiF PE=3 SV=2
Length = 642
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 31/188 (16%)
Query: 82 RYGLVGPNGHGKTTLLRHIATR------ALAIPSSIDLLYCEQEVEASDDSAVNIVLSAD 135
R +VG NG GK+TLL+ IA + + P I + Y Q DS + I
Sbjct: 31 RIAIVGRNGAGKSTLLKIIAGQLSYEKGEIIKPKDITMGYLAQHTGL--DSKLTI----- 83
Query: 136 KNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVK-LLKECSKLERDESGDNQLRLTEV 194
+ +LL L+ +E + + +AD ++ ++K +L++
Sbjct: 84 --KEELLTVFDHLKAMEKEMRAMEEKMAAADPGELESIMKTYDRLQQ------------- 128
Query: 195 YDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLL 254
E K E R +L GLGF+ + SGG + R++L + L +P LL+L
Sbjct: 129 --EFKDKGGYQYEADVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLIL 186
Query: 255 DEPTNHLD 262
DEPTNHLD
Sbjct: 187 DEPTNHLD 194
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 191 LTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT 250
L E++DE + E R L F+ + K SGG + R++LA+ + +
Sbjct: 409 LDELWDEYPGL----PEKEIRTCLGNFLFSGDDVLKPVHSLSGGEKARLALAKLMLQKAN 464
Query: 251 LLLLDEPTNHLD 262
L+LDEPTNHLD
Sbjct: 465 FLILDEPTNHLD 476
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 60 IKVENFSLS-----PCL-KVQKQIASGRRYGLVGPNGHGKTTLLRHIATR------ALAI 107
++V++ ++S P L +V + G LVGPNG GK+TLL+ + ++
Sbjct: 327 LRVQDLTISYENQPPLLTEVSFMLTRGESAALVGPNGIGKSTLLKTLIDTLKPDQGTISY 386
Query: 108 PSSIDLLYCEQE 119
S++ + Y +QE
Sbjct: 387 GSNVSVGYYDQE 398
>sp|O93796|EF3_CANGA Elongation factor 3 OS=Candida glabrata (strain ATCC 2001 / CBS 138
/ JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TEF3 PE=3 SV=2
Length = 1045
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 174 KECSKLERDESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSG 233
+EC + + D T V D + S E E + L GFT+EM SG
Sbjct: 488 EECMTVYVEHDIDGTHADTSVLDFVVSSEVGTKEAITAK-LVEFGFTEEMINMPISSLSG 546
Query: 234 GWRMRVSLARALFLEPTLLLLDEPTNHLD 262
GW+M+++LARA+ +LLLDEPTNHLD
Sbjct: 547 GWKMKLALARAVLKNADILLLDEPTNHLD 575
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 72 KVQKQIASGRRYGLVGPNGHGKTTLLRHIA---TRALAIPSSIDLLYCEQEVEAS--DDS 126
K Q ++ GRRYGL GPNG GK+TL+R IA P +Y E +++ + D S
Sbjct: 448 KTQLRLKRGRRYGLCGPNGAGKSTLMRAIANGQVDGFPTPEECMTVYVEHDIDGTHADTS 507
Query: 127 AVNIVLSAD 135
++ V+S++
Sbjct: 508 VLDFVVSSE 516
Score = 38.1 bits (87), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 215 AGLGFTKEMQEKS-TKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
A LG E+ S + SGG ++++ LA + P L++LDEPTN+LD
Sbjct: 880 AMLGLDAELVSHSRIRGLSGGQKVKLVLAACSWQRPHLIVLDEPTNYLD 928
>sp|Q88AS5|CYSA_PSESM Sulfate/thiosulfate import ATP-binding protein CysA OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=cysA PE=3 SV=1
Length = 326
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 45/201 (22%)
Query: 64 NFSLSPCLK-VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEA 122
NF+ L + I SG L+GP+G GKTTLLR IA L P +++ ++V
Sbjct: 11 NFNAFKALNNISLDIQSGELVALLGPSGCGKTTLLRIIA--GLETPDDGSIVFHGEDVSG 68
Query: 123 SDDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERD 182
D D+N + + + + D+ A + + R
Sbjct: 69 HD--------VRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKSER------------- 107
Query: 183 ESGDNQLRLTE-VYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSL 241
N+ R+ E V++ L ++ D + ++ ++ SGG R R++L
Sbjct: 108 ---PNETRIAEKVHELLNMVQLDW-----------------LADRYPEQLSGGQRQRIAL 147
Query: 242 ARALFLEPTLLLLDEPTNHLD 262
ARAL +EP +LLLDEP LD
Sbjct: 148 ARALAVEPKVLLLDEPFGALD 168
>sp|P33916|YEJF_ECOLI Uncharacterized ABC transporter ATP-binding protein YejF
OS=Escherichia coli (strain K12) GN=yejF PE=3 SV=1
Length = 529
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 56/233 (24%)
Query: 34 ELENFTVSQSSKASSKRSTVDDNSVDIKVENFSLSPCLKVQKQIASGRRYGLVGPNGHGK 93
++E V+ + + VD N V V+N S + + +G GLVG +G GK
Sbjct: 277 DVEQLQVAFPIRKGILKRIVDHNVV---VKNISFT--------LRAGETLGLVGESGSGK 325
Query: 94 TT----LLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNRVKLLKECSKLE 149
+T LLR I ++ +++ Q ++ + NR +LL +++
Sbjct: 326 STTGLALLRLINSQG-------SIIFDGQPLQ-------------NLNRRQLLPIRHRIQ 365
Query: 150 QVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDELKSIEADAAEPR 209
V +S++N L N +++++E ++ + ++ A E +
Sbjct: 366 VVFQDPNSSLNPRL----NVLQIIEEGLRVHQ-----------------PTLSAAQREQQ 404
Query: 210 ARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
++ +G E + + EFSGG R R+++ARAL L+P+L++LDEPT+ LD
Sbjct: 405 VIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLD 457
Score = 38.5 bits (88), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 230 EFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
+ SGG R RV +A AL P LL+ DEPT LD
Sbjct: 156 QLSGGERQRVMIAMALLTRPELLIADEPTTALD 188
>sp|P53978|EF3B_YEAST Elongation factor 3B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HEF3 PE=1 SV=2
Length = 1044
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 217 LGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
GF+ EM E SGGW+M+++LARA+ + +LLLDEPTNHLD
Sbjct: 530 FGFSDEMIEMPIASLSGGWKMKLALARAVLKDADILLLDEPTNHLD 575
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 72 KVQKQIASGRRYGLVGPNGHGKTTLLRHIATRAL-AIPSSIDL--LYCEQEVE--ASDDS 126
K Q ++ GRRYGL GPNG GK+TL+R IA + P+ + +Y E +++ SD S
Sbjct: 448 KTQLRLKRGRRYGLCGPNGAGKSTLMRSIANGQVDGFPTQDECRTVYVEHDIDNTHSDMS 507
Query: 127 AVNIVLSADKNRVKLLKECSKLEQVEASDD 156
++ V S + ++ SKL++ SD+
Sbjct: 508 VLDFVYSGNVGTKDVI--TSKLKEFGFSDE 535
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 215 AGLGFTKEMQEKS-TKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
A LG E+ S + SGG ++++ LA + P L++LDEPTN+LD
Sbjct: 880 AMLGLDSELVSHSRIRGLSGGQKVKLVLAACTWQRPHLIVLDEPTNYLD 928
>sp|P16521|EF3A_YEAST Elongation factor 3A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YEF3 PE=1 SV=4
Length = 1044
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 214 LAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
L GFT EM SGGW+M+++LARA+ +LLLDEPTNHLD
Sbjct: 527 LIEFGFTDEMIAMPISALSGGWKMKLALARAVLRNADILLLDEPTNHLD 575
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 72 KVQKQIASGRRYGLVGPNGHGKTTLLRHIATRAL-AIPSSIDL--LYCEQEVEA--SDDS 126
K Q ++ RRYG+ GPNG GK+TL+R IA + P+ + +Y E +++ SD S
Sbjct: 448 KTQLRLKRARRYGICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTS 507
Query: 127 AVNIVL 132
++ V
Sbjct: 508 VLDFVF 513
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 217 LGFTKEMQEKS-TKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
LG E+ S + SGG ++++ LA + P L++LDEPTN+LD
Sbjct: 882 LGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLD 928
>sp|O06476|YFMR_BACSU Uncharacterized ABC transporter ATP-binding protein YfmR
OS=Bacillus subtilis (strain 168) GN=yfmR PE=3 SV=1
Length = 629
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 31/192 (16%)
Query: 76 QIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSAD 135
I R GL+GPNG GK+TLL+ IA L +E E + +V
Sbjct: 25 HIEENERIGLIGPNGTGKSTLLKVIAG-----------LESIEEGEITKSGSV------- 66
Query: 136 KNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSK----LERD-ESGDNQLR 190
+V+ L + +L + + + + S + +K L+E K L +D E+ Q
Sbjct: 67 --QVEFLHQDPEL----PAGQTVLEHIYSGESAVMKTLREYEKALYELGKDPENEQRQKH 120
Query: 191 LTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT 250
L ++ + A A A+ +L+ LG K E SGG + RV++A+ L
Sbjct: 121 LLAAQAKMDANNAWDANTLAKTVLSKLGVNDVT--KPVNELSGGQKKRVAIAKNLIQPAD 178
Query: 251 LLLLDEPTNHLD 262
LL+LDEPTNHLD
Sbjct: 179 LLILDEPTNHLD 190
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 203 ADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
AD A ++L F + MQ+ ++ SGG + R+ L + L EP +L LDEPTN LD
Sbjct: 413 ADGDMITAEQMLERFLFPRSMQQTYIRKLSGGEKRRLYLLQVLMQEPNVLFLDEPTNDLD 472
>sp|Q57242|UUP1_HAEIN ABC transporter ATP-binding protein uup-1 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=uup-A
PE=3 SV=1
Length = 647
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 36/206 (17%)
Query: 64 NFSLSPCL-KVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEA 122
+FS +P L + I LVG NG GK+TLL+ IA D+L + +++
Sbjct: 12 SFSDAPLLDHAELHIEPNECVCLVGRNGAGKSTLLKIIAG---------DVLMDDGKIQY 62
Query: 123 SDDSAVNIVLSADKNRVKLLKECSKLEQ--VEASDDSAVNIVLSADKNRVKLLKECSKL- 179
D V S+LEQ + + + V + LLKE ++
Sbjct: 63 EKDLVV-----------------SRLEQDPPRNAQGNIFDYVAEGVGHLTDLLKEYHQIS 105
Query: 180 -ERDESGDNQL--RLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWR 236
+ +E+ +Q+ +L +V +L+ + E + +L LG + + SGGW
Sbjct: 106 VQLEENYSDQILSQLEQVQAKLEHADGWRFENKINEVLLKLGLNPNTKLSA---LSGGWL 162
Query: 237 MRVSLARALFLEPTLLLLDEPTNHLD 262
+ +LARAL +P +LLLDEPTNHLD
Sbjct: 163 RKAALARALVCDPDVLLLDEPTNHLD 188
>sp|P43672|UUP_ECOLI ABC transporter ATP-binding protein uup OS=Escherichia coli (strain
K12) GN=uup PE=1 SV=2
Length = 635
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 65 FSLSPCL-KVQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEAS 123
FS +P L + I R LVG NG GK+TL++ +L EQ +
Sbjct: 13 FSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMK--------------ILNREQGL--- 55
Query: 124 DDSAVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLER-- 181
DD I+ D +L ++ + VE S + V + + + LK + R
Sbjct: 56 DDG--RIIYEQDLIVARLQQDPPR--NVEG---SVYDFVAEGIEEQAEYLKRYHDISRLV 108
Query: 182 --DESGDNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRV 239
D S N L +V ++L E R +LA LG + + SGGW +
Sbjct: 109 MNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNV---ALSSLSGGWLRKA 165
Query: 240 SLARALFLEPTLLLLDEPTNHLD 262
+L RAL P +LLLDEPTNHLD
Sbjct: 166 ALGRALVSNPRVLLLDEPTNHLD 188
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 59/189 (31%)
Query: 76 QIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSAD 135
Q+ G + L+GPNG GKTTLL+ + + L AD
Sbjct: 341 QVLRGDKIALIGPNGCGKTTLLKLMLGQ----------------------------LQAD 372
Query: 136 KNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVY 195
R+ + +KLE V D++R +L + + ++ G ++ +
Sbjct: 373 SGRIHV---GTKLE------------VAYFDQHRAELDPDKTVMDNLAEGKQEVMVN--- 414
Query: 196 DELKSIEADAAEPR-ARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPT-LLL 253
+PR L F + + SGG R R+ LAR LFL+P+ LL+
Sbjct: 415 ----------GKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLAR-LFLKPSNLLI 463
Query: 254 LDEPTNHLD 262
LDEPTN LD
Sbjct: 464 LDEPTNDLD 472
>sp|O34512|YFMM_BACSU Uncharacterized ABC transporter ATP-binding protein YfmM
OS=Bacillus subtilis (strain 168) GN=yfmM PE=3 SV=2
Length = 518
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 31/197 (15%)
Query: 73 VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAV---- 128
V ++ G GL+G NG GK+T + +I T L P E +VE S + V
Sbjct: 22 VSFRLLKGEHVGLIGANGEGKSTFM-NIITGKLE-PD-------EGKVEWSKNVRVGYLD 72
Query: 129 -NIVLSADKNRVKLLKEC-SKLEQVEASDDSAVNIVLSADKNRV-KLLKECSKLERDESG 185
+ VL K+ +LK+ L +E + N + AD + + KLL+E ++
Sbjct: 73 QHTVLEKGKSIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEKLLEEVGVIQ----- 127
Query: 186 DNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARAL 245
D L + + + + I GLG + E+ + SGG R +V LA+ L
Sbjct: 128 ----------DALTNNDFYVIDSKVEEIARGLGLSDIGLERDVTDLSGGQRTKVLLAKLL 177
Query: 246 FLEPTLLLLDEPTNHLD 262
+P +LLLDEPTN+LD
Sbjct: 178 LEKPEILLLDEPTNYLD 194
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 186 DNQLRLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARAL 245
+N + EV+ E S + R LA G T + E SGG + +V L + +
Sbjct: 400 NNNTCIEEVWSEFPSY----TQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLI 455
Query: 246 FLEPTLLLLDEPTNHLD 262
E LL+LDEPTNHLD
Sbjct: 456 NSETNLLVLDEPTNHLD 472
>sp|Q88ZJ6|POTA_LACPL Spermidine/putrescine import ATP-binding protein PotA
OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB
8826 / WCFS1) GN=potA PE=3 SV=1
Length = 365
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 48/185 (25%)
Query: 79 SGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSADKNR 138
+G+ Y L+GP+G GKTT+LR IA A + D +N L A++ +
Sbjct: 33 AGKFYTLLGPSGCGKTTILRTIAGFTDATSGQVYF----------DGQVIN-TLPANQRQ 81
Query: 139 VK-LLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVYDE 197
V + ++ + + +++ A + L K+ +DE
Sbjct: 82 VNTVFQDYALFPHMNVAENVAFGLKLH-------------KVPKDE-------------- 114
Query: 198 LKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEP 257
IE + A LA LG E+ E SGG + RV++ARAL ++P +LLLDEP
Sbjct: 115 ---IETRVQKALAMVQLADLG------EREISEISGGQQQRVAIARALVMQPKVLLLDEP 165
Query: 258 TNHLD 262
+ LD
Sbjct: 166 LSALD 170
>sp|Q75EV6|EF3_ASHGO Elongation factor 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=TEF3 PE=3 SV=2
Length = 1044
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 217 LGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
GF+ EM SGGW+M+++LARA+ +LLLDEPTNHLD
Sbjct: 530 FGFSDEMIAMPIMSLSGGWKMKLALARAVLKNADILLLDEPTNHLD 575
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 72 KVQKQIASGRRYGLVGPNGHGKTTLLRHIATRAL-AIPSSIDL--LYCEQEVEAS--DDS 126
K Q ++ RRYGL GPNG GK+TL+R IA + P+ + +Y E +++ + D S
Sbjct: 448 KTQLRLKRARRYGLCGPNGAGKSTLMRAIANGQVDGFPTQDECRTVYVEHDIDGTQADTS 507
Query: 127 AVNIVLSADKNRVKLLKECSKLEQVEASDDSAVNIVLS 164
++ V D +++ E KL + SD+ ++S
Sbjct: 508 VLDFVFQGDVGTREVITE--KLREFGFSDEMIAMPIMS 543
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 104/262 (39%), Gaps = 59/262 (22%)
Query: 60 IKVENFSLSPCLKVQKQIAS-------GRRYGLVGPNGHGKTTLLR-------------- 98
+KV N S + QIA R ++GPNG GK+TL+
Sbjct: 667 VKVSNMSFQYPGTSKPQIADINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTTGEVY 726
Query: 99 --------HIATRALA-IPSSIDLLYCE-------------------QEVEASDDSAVNI 130
+I A A I + +D E +++ SD ++N
Sbjct: 727 THENCRIAYIKQHAFAHIENHLDKTPSEYIQWRFQTGEDRETMDRANRQINESDAESMNK 786
Query: 131 VLSADKN--RVKLLKECSKLE---QVEASDDSAVNIVLSADKNRVKLLKECSKLERDESG 185
+ D R+ + K + + E S NI + +++ + + + L R E
Sbjct: 787 IFKIDGTPRRIAGIHSRRKFKNTYEYECSFLLGENIGMKSERWVPMMSVDNAWLPRGELI 846
Query: 186 DNQLRLTEVYDELKSIEADAAEPRARRIL----AGLGFTKEMQEKS-TKEFSGGWRMRVS 240
++ ++ D +++ + P R+ + A LG E+ S + SGG ++++
Sbjct: 847 ESHSKMVAEVDMKEALASGQFRPLTRKEIEEHCAMLGLEAELVSHSRIRGLSGGQKVKLV 906
Query: 241 LARALFLEPTLLLLDEPTNHLD 262
LA + P L++LDEPTN+LD
Sbjct: 907 LAACTWQRPHLIVLDEPTNYLD 928
>sp|Q08972|NEW1_YEAST [NU+] prion formation protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NEW1 PE=1 SV=1
Length = 1196
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 214 LAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
L +GF +E + ++ SGGW+M++ LARA+ + +LLLDEPTNHLD
Sbjct: 671 LESVGFDEERRAQTVGSLSGGWKMKLELARAMLQKADILLLDEPTNHLD 719
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 231 FSGGWRMRVSLARALFLEPTLLLLDEPTNHLD 262
SGG ++V +A A++ P LL+LDEPTN+LD
Sbjct: 1033 LSGGQLVKVVIAGAMWNNPHLLVLDEPTNYLD 1064
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 54 DDNSVDIKVENFSLSP-----CLKVQKQIASGRRYGLVGPNGHGKTTLLRHIATRAL-AI 107
+D ++I +FSL+ K ++ G RYGL G NG GK+TL+R IA L
Sbjct: 566 EDEGIEIVNTDFSLAYGSRMLLNKTNLRLLKGHRYGLCGRNGAGKSTLMRAIANGQLDGF 625
Query: 108 PSSIDLLYC 116
P L C
Sbjct: 626 PDKDTLRTC 634
>sp|Q64Z80|LOLD_BACFR Lipoprotein-releasing system ATP-binding protein LolD
OS=Bacteroides fragilis (strain YCH46) GN=lolD PE=3 SV=1
Length = 216
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 40/187 (21%)
Query: 76 QIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVLSAD 135
+I G +VGP+G GKTTLL+ + T +++ D +NI D
Sbjct: 23 EITQGEVVSIVGPSGAGKTTLLQIMGT-----------------LDSPDTGMINI----D 61
Query: 136 KNRVKLLKECSKLEQVEASDDSAVNIVLSADKNRVKLLKECSKLERDESGDNQLRLTEVY 195
V +KE +++ A + + V + LL E + LE +
Sbjct: 62 GTNVSRMKE----KELSAFRNKHIGFVFQFHQ----LLPEFTALEN----------VMIP 103
Query: 196 DELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEPTLLLLD 255
+ + A RA IL +G KE E SGG + RV++ARAL +P ++L D
Sbjct: 104 AFIAGVPTKEASMRAMEILDFMGL-KERASHKPNELSGGEKQRVAVARALINQPAVILAD 162
Query: 256 EPTNHLD 262
EP+ LD
Sbjct: 163 EPSGSLD 169
>sp|Q1WVI7|POTA_LACS1 Spermidine/putrescine import ATP-binding protein PotA
OS=Lactobacillus salivarius (strain UCC118) GN=potA PE=3
SV=1
Length = 362
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 52/193 (26%)
Query: 73 VQKQIASGRRYGLVGPNGHGKTTLLRHIATRALAIPSSIDLLYCEQEVEASDDSAVNIVL 132
V I G+ Y L+GP+G GKTT+L IA L+ +S D+ + D +N V
Sbjct: 25 VSFDIEEGKFYTLLGPSGCGKTTILNIIA--GLSDATSGDVYF--------DGKRINDVP 74
Query: 133 SADKNRVKLLKECSKLEQVEASDDSAVNIVL---SADKNRVKLLKECSKLERDESGDNQL 189
+ + + ++ + + + D+ A + + ADK +KE
Sbjct: 75 ANKRQVNTVFQDYALFQHLNVYDNIAFGLKIKKVPADK-----IKE-------------- 115
Query: 190 RLTEVYDELKSIEADAAEPRARRILAGLGFTKEMQEKSTKEFSGGWRMRVSLARALFLEP 249
++TE L+ + D E RA E SGG R RV++ARA+ L+P
Sbjct: 116 KVTEA---LRMVRLDGYEDRA-----------------ISEMSGGQRQRVAIARAIVLDP 155
Query: 250 TLLLLDEPTNHLD 262
+LLLDEP + LD
Sbjct: 156 KVLLLDEPLSALD 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.338
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,246,821
Number of Sequences: 539616
Number of extensions: 3379813
Number of successful extensions: 25367
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3242
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 18259
Number of HSP's gapped (non-prelim): 7226
length of query: 262
length of database: 191,569,459
effective HSP length: 115
effective length of query: 147
effective length of database: 129,513,619
effective search space: 19038501993
effective search space used: 19038501993
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)