Query psy269
Match_columns 345
No_of_seqs 205 out of 370
Neff 6.3
Searched_HMMs 46136
Date Fri Aug 16 22:42:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy269.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/269hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4625|consensus 100.0 2.5E-57 5.4E-62 453.5 18.7 298 1-342 61-374 (595)
2 smart00588 NEUZ domain in neur 100.0 4E-37 8.6E-42 260.6 13.4 120 34-153 2-123 (123)
3 KOG4625|consensus 100.0 9.9E-30 2.1E-34 255.4 15.0 294 32-342 291-591 (595)
4 PF07177 Neuralized: Neuralize 99.9 7.7E-27 1.7E-31 178.5 7.1 68 34-101 1-69 (69)
5 smart00588 NEUZ domain in neur 99.9 6.2E-24 1.3E-28 180.0 9.2 81 261-341 2-82 (123)
6 PF07177 Neuralized: Neuralize 99.9 5.8E-24 1.3E-28 162.7 7.3 68 261-329 1-69 (69)
7 PF00622 SPRY: SPRY domain; I 97.3 0.0048 1E-07 50.6 11.8 97 76-185 5-118 (124)
8 smart00449 SPRY Domain in SPla 97.3 0.0082 1.8E-07 49.4 12.7 93 76-180 5-113 (122)
9 KOG4030|consensus 96.0 0.3 6.5E-06 43.2 13.6 129 27-176 21-166 (197)
10 KOG2626|consensus 93.0 0.52 1.1E-05 48.9 9.0 129 41-181 300-486 (544)
11 KOG3953|consensus 84.5 2.7 5.9E-05 39.5 6.3 50 135-186 144-195 (242)
12 PF01835 A2M_N: MG2 domain; I 70.2 10 0.00022 30.0 5.0 20 63-82 2-22 (99)
13 PF01835 A2M_N: MG2 domain; I 67.9 15 0.00033 29.0 5.5 41 291-331 2-47 (99)
14 KOG4367|consensus 47.0 87 0.0019 32.4 7.9 155 2-164 498-672 (699)
15 PF10179 DUF2369: Uncharacteri 30.1 2.1E+02 0.0045 28.1 7.4 81 259-341 95-178 (300)
16 PF10989 DUF2808: Protein of u 29.1 2.1E+02 0.0046 24.6 6.7 40 65-104 93-133 (146)
17 PF10179 DUF2369: Uncharacteri 28.2 2E+02 0.0044 28.2 7.0 78 34-111 97-177 (300)
18 KOG0349|consensus 21.5 1E+02 0.0022 32.2 3.6 37 134-171 187-227 (725)
19 COG3269 Predicted RNA-binding 21.4 2.1E+02 0.0047 22.2 4.6 38 67-104 9-47 (73)
20 COG4918 Uncharacterized protei 20.6 1E+02 0.0022 25.6 2.8 41 141-184 18-58 (114)
No 1
>KOG4625|consensus
Probab=100.00 E-value=2.5e-57 Score=453.47 Aligned_cols=298 Identities=38% Similarity=0.659 Sum_probs=252.8
Q ss_pred CCCCCCCCCCCCCccccC------cCCCCCCC-CCCCCCCCcccccCCCCceEEecCCeeEEecccCCCeEEEcCCcCCC
Q psy269 1 MDPLNFPSTNRPRFFSCV------TAPRTGSN-SGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKI 73 (345)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~l~FH~~~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~ 73 (345)
+||.-|+-+.+++.---+ ...++.++ ..+....+|+||++||+||+|++++++|+|.++||+|||||+|||++
T Consensus 61 s~~~P~~~~~~~~~~~~~~l~~~~~~~p~~~n~~~p~~~~pl~fH~iHGsNi~I~~~g~~A~RraSF~dAItFSnRPl~~ 140 (595)
T KOG4625|consen 61 SDPGPFAENDPGRVYKVGHLYGKGEVLPSGSNQVTPLSRFPLQFHSIHGSNIRIDNSGTLAKRRASFCDAITFSNRPLRI 140 (595)
T ss_pred CCCCCcccccCCccccceeccCCcccCCCccCCcCcCCCCCceeecccCcceEECCCcceeehhhhhcceeeeccCcCCC
Confidence 355566666665554333 12244444 55667889999999999999999999999999999999999999999
Q ss_pred CCEEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCCCCCcccccceeEecccccccCCCcEEEEEEcCCceEEEEEc
Q psy269 74 NEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGIN 153 (345)
Q Consensus 74 ~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a~pdL~~~~~~W~~~~~~~~~~~g~~l~~~~~~~G~l~~~VN 153 (345)
||.|+|||+|++..|+|+||+|||..||+.+++..+.||||||+++.+||++++++.|+++|+++.||++..|+++|.||
T Consensus 141 ~E~f~v~ieki~~~WSG~irlGvT~~dPe~i~~~~~tfa~PDL~nl~G~Wa~al~e~~~n~~~i~~~~v~~~g~v~~~in 220 (595)
T KOG4625|consen 141 GELFLVEIEKIERGWSGHLRLGVTSLDPEDIRPSPETFACPDLVNLSGFWAKALPETYRNEGNILAFAVNPKGRVFYGIN 220 (595)
T ss_pred CcEEEEEEEEeccCccceeEeecccCCHhhccCCCccccCcchhccCchhhhhcchhhcccccchhhhhcCCCcceeeec
Confidence 99999999999999999999999999999999733479999999999999999999999999999999999999999999
Q ss_pred CCcceeeeecCCCCC---------ceEEEEeccCCceEEEEecCccccccccccccCCCCcccCCCCCCCCcccccchhh
Q psy269 154 GEEKGVFFTGVETRG---------PLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPINNNSNIDLMNRYI 224 (345)
Q Consensus 154 G~~~G~~~~~V~~~~---------pLwAvvDvYG~t~~V~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (345)
|..+++|+.||.+.. ..|+++|+|+++.++++.+........ +
T Consensus 221 ~~~~~~fftgi~~~~~a~~~~s~~~~r~~~~l~~~~~~~sl~~a~~~~~~~----------------------------~ 272 (595)
T KOG4625|consen 221 GSGKMHFFTGIRTQGHACSRPSLAQARHPVDLLVQCVPVSLHDAGLDAAAL----------------------------L 272 (595)
T ss_pred CcceEEEeecccccchhhccCCchheeehhhhhccccchhhhhcccchhhc----------------------------c
Confidence 999999999997521 589999999999999887644321100 0
Q ss_pred hcccccccCCCCCCCCCCCCCCCCCCccCCCCCCCCCCccccCCCCcEEEcCCCeeEEeccCCCCCeEEEeCCCCCCCCe
Q psy269 225 VNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEK 304 (345)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~FH~~~G~~V~Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~ 304 (345)
.++-+. .....+.+++....+++||.++|+||+|+.++++|.|....|++++||++|||+.+|+
T Consensus 273 ~~s~s~----------------~s~~~~~~~~~~~~~~rfH~~~G~nv~l~~d~tvA~r~~~~~s~glVFterPlr~~e~ 336 (595)
T KOG4625|consen 273 APSNSR----------------NSQHSRLLPPGLDGPLRFHATKGANVRLSDDGTVARREHGAYSQGLVFTERPLRVGEK 336 (595)
T ss_pred CCcccc----------------ccccccccCCCCCCccceeeeccccccccCCCcccccccccccceEEEEecccccCCE
Confidence 000000 0123345666668899999999999999999999999988899999999999999999
Q ss_pred EEEEEeeeCCCcccceEEeeeeeCCCCCCCCCCCcccc
Q psy269 305 IVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSI 342 (345)
Q Consensus 305 ~~vrI~~~~~~w~GsL~~GvT~~~P~~L~~~~Lp~~~~ 342 (345)
|+|+|.+++..|.|+|+||+|+|||++|++.+||+++.
T Consensus 337 ~~Ikv~~v~~l~~G~L~lGvT~~dpg~l~p~~Lp~sp~ 374 (595)
T KOG4625|consen 337 LEIKVTRVGRLYAGALSLGVTTCDPGTLRPADLPFSPE 374 (595)
T ss_pred EEEEeeecchhhcchhhccceecCccccccCCCCCChh
Confidence 99999999999999999999999999999999999863
No 2
>smart00588 NEUZ domain in neuralized proteins.
Probab=100.00 E-value=4e-37 Score=260.56 Aligned_cols=120 Identities=48% Similarity=0.841 Sum_probs=117.2
Q ss_pred CcccccCCCCceEEecCCeeEEeccc-CCCeEEEcCCcCCCCCEEEEEEEeEcCCcceeeEEeeeecCCCCcCc-CCCCC
Q psy269 34 PLYFHQVHGENVRVSRDGTVAKRYES-FCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKY-ALPRY 111 (345)
Q Consensus 34 ~l~FH~~~G~nV~Ls~~~~~A~R~~s-f~~giVFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~-~LP~~ 111 (345)
+|+||..||+||+|++++++|+|..+ ||||||||+|||++||+|+|+|++.+.+|+|+|+||||+|||+.+++ +||.+
T Consensus 2 ~l~FH~~~G~ni~l~~~~~~A~R~~~~f~~givFS~rPl~~~E~~~v~i~~~~~~w~G~l~~G~Ts~dP~~l~~~~lp~~ 81 (123)
T smart00588 2 PLRFHHRHGSNIRLSDSGRVARRSASDFCNALVFSARPLRINELFEVKIEKVVRKWSGALRFGVTTCDPATLRPASLPTN 81 (123)
T ss_pred CcccccccCCCeEECCCCcEEEcccCCcCceEEecCCCCcCCCEEEEEEEEecCCccCceEEEEecCCcccccCccCccc
Confidence 69999999999999999999999876 99999999999999999999999999999999999999999999997 89999
Q ss_pred CCCCcccccceeEecccccccCCCcEEEEEEcCCceEEEEEc
Q psy269 112 VCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGIN 153 (345)
Q Consensus 112 a~pdL~~~~~~W~~~~~~~~~~~g~~l~~~~~~~G~l~~~VN 153 (345)
++|||.++++||++++.+.++..|+++.|+++.+|+|+|.||
T Consensus 82 ~~~dl~~~~g~wv~~~~~~~~~~g~~l~f~~~~~G~v~~~vn 123 (123)
T smart00588 82 ACPDLVDMSGFWAKALGEGLAEQGGILGLDVLAEGEVVGVIN 123 (123)
T ss_pred CcccccccCCcceEECChhhccCCCEEEEEECCCceEEEEeC
Confidence 999999999999999999999999999999999999999998
No 3
>KOG4625|consensus
Probab=99.96 E-value=9.9e-30 Score=255.40 Aligned_cols=294 Identities=23% Similarity=0.355 Sum_probs=217.7
Q ss_pred CCCcccccCCCCceEEecCCeeEEecc-cCCCeEEEcCCcCCCCCEEEEEEEeEcCCcceeeEEeeeecCCCCcCc-CCC
Q psy269 32 LPPLYFHQVHGENVRVSRDGTVAKRYE-SFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKY-ALP 109 (345)
Q Consensus 32 ~~~l~FH~~~G~nV~Ls~~~~~A~R~~-sf~~giVFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~-~LP 109 (345)
..+++||.++|.||+|++++++|.|.. .|++|+||++|||+.+|+|+|+|+++...|.|+|.||+|+|||+++.. .||
T Consensus 291 ~~~~rfH~~~G~nv~l~~d~tvA~r~~~~~s~glVFterPlr~~e~~~Ikv~~v~~l~~G~L~lGvT~~dpg~l~p~~Lp 370 (595)
T KOG4625|consen 291 DGPLRFHATKGANVRLSDDGTVARREHGAYSQGLVFTERPLRVGEKLEIKVTRVGRLYAGALSLGVTTCDPGTLRPADLP 370 (595)
T ss_pred CCccceeeeccccccccCCCcccccccccccceEEEEecccccCCEEEEEeeecchhhcchhhccceecCccccccCCCC
Confidence 348999999999999999999999975 499999999999999999999999999999999999999999999998 898
Q ss_pred CCCCCCcccccceeEe-cccccccCCCcEEEEEEcCCceEEEEEcCCcceeeeecCCCCCceEEEEeccCCceEEEEecC
Q psy269 110 RYVCPDLTNKPGYWAK-ALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDS 188 (345)
Q Consensus 110 ~~a~pdL~~~~~~W~~-~~~~~~~~~g~~l~~~~~~~G~l~~~VNG~~~G~~~~~V~~~~pLwAvvDvYG~t~~V~ll~~ 188 (345)
.+ ..+|+++++||++ +.-...+..|+++.|+++.+|||++.+||...|+.+ +||.+.+||+.+|+||...++.+++-
T Consensus 371 ~s-p~~l~~rpe~w~~s~~ia~~~~~~~~~~~~v~~~Gel~~~~~g~~a~~~l-~vD~sl~l~~~~~~~g~~as~~~~~~ 448 (595)
T KOG4625|consen 371 FS-PEALVDRPEYWVVSCDIAGPPHVGDILQLVVNAYGELELSHNGAAAGVQL-CVDASLPLWMLFDVYGTIASIRILGV 448 (595)
T ss_pred CC-hhhhccchhhhhheeecccCcccCceeeEEEcCCCcEEEeecCCceEEEE-EecCceeeeeeccccchhhhhhhccc
Confidence 87 4779999999973 222334678999999999999999999999999999 59999999999999998888888763
Q ss_pred cccc---ccccccccCCCCcccCCCCCCCCcccccchhhhcccccccCCC-CCCCCCCCCCCCCCCccCCCCCCCCCCcc
Q psy269 189 RAQL---NNARRVSTHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHP-QSTPAPLPEDTQVPLRALTSPQDLVPLPF 264 (345)
Q Consensus 189 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~F 264 (345)
-.-+ ...++.+...++ + +..+++ ..+++..+.... +.......+.. +.. +.-.+.....++|
T Consensus 449 ~~v~~~y~~~~~vti~s~~-----~--s~~s~~-----tsp~~~~~~~g~~a~~~st~~~~~-~~~-~a~~~~~~s~~~v 514 (595)
T KOG4625|consen 449 LPVMDSYGPAERVTIPSSP-----S--SPASTP-----TSPSALSSDLGDTAPSDSTCSSGG-LGS-SAGGPSPPSTLSV 514 (595)
T ss_pred cccccccCcccceeeccCC-----C--ccccCC-----CCCCccccCCCCCCCcccccccCC-CCc-CCCCCCCCCccch
Confidence 2211 001111000000 0 000000 001111111000 00000000000 000 1111222466788
Q ss_pred ccCCCCcEEEcCCCeeEEeccCCCCCeEEEeCCCCCCCCeEEEEEeeeCCCcccceEEeeeeeCCCCCCCCCCCcccc
Q psy269 265 HRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSI 342 (345)
Q Consensus 265 H~~~G~~V~Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~~~vrI~~~~~~w~GsL~~GvT~~~P~~L~~~~Lp~~~~ 342 (345)
-..++.+..++.....+.|. ..++...+.+..|+-+.-.+..++.....+|..+...|+-++.|.+..+...+.++.
T Consensus 515 ~e~~~~~gl~~~~~~~~t~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~tss~~~~~~~~a~~~~n~~~~~~~~~ 591 (595)
T KOG4625|consen 515 LESQSNNGLLSLVVNLPTRS-SSHDILGQLIAAPVTPQLVLAGACSSGRLQSTSSSQYIEQTIAPSTNNAPNSWCDSL 591 (595)
T ss_pred hhccCCCccccccccCcccc-ccccccceEeccccchHHHhhhccccccccccccchhceeeeccccCCCCCchhhhh
Confidence 88899999998888888887 677888888888888888888899999999999999999999999999888777654
No 4
>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i.e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.
Probab=99.94 E-value=7.7e-27 Score=178.53 Aligned_cols=68 Identities=56% Similarity=0.984 Sum_probs=53.0
Q ss_pred Cccccc-CCCCceEEecCCeeEEecccCCCeEEEcCCcCCCCCEEEEEEEeEcCCcceeeEEeeeecCC
Q psy269 34 PLYFHQ-VHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDP 101 (345)
Q Consensus 34 ~l~FH~-~~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP 101 (345)
||+||+ +||+||+|++|+++|+|.++||||||||+|||+++|+|+|||++++..|+|+|+||||++||
T Consensus 1 pl~FH~~~~G~nV~L~~~~~~A~R~~sf~~giVFS~rPl~~~E~~~v~I~~~~~~wsG~L~~GvT~~~P 69 (69)
T PF07177_consen 1 PLRFHPNVHGKNVRLSNDGTVARRVSSFNNGIVFSSRPLRIGEKFEVRIDEVEPSWSGSLRIGVTSCDP 69 (69)
T ss_dssp S--EEC-EE-TTEEE-SSS-EEEEST-SSS-EEEESS-B-TT-EEEEEEEEE-SSSSS--EEEEESS-C
T ss_pred CccccCcccCCCEEEcCCCeEEEecccCCceEEEecCCccCCCEEEEEEEecCCCceeEEEEeeEccCC
Confidence 689998 89999999999999999999999999999999999999999999999999999999999998
No 5
>smart00588 NEUZ domain in neuralized proteins.
Probab=99.90 E-value=6.2e-24 Score=180.00 Aligned_cols=81 Identities=33% Similarity=0.729 Sum_probs=77.3
Q ss_pred CCccccCCCCcEEEcCCCeeEEeccCCCCCeEEEeCCCCCCCCeEEEEEeeeCCCcccceEEeeeeeCCCCCCCCCCCcc
Q psy269 261 PLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLS 340 (345)
Q Consensus 261 ~l~FH~~~G~~V~Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~~~vrI~~~~~~w~GsL~~GvT~~~P~~L~~~~Lp~~ 340 (345)
+|+||..||+||+|++++++|+|...+|++|||||+|||+++|+|+|+|++.+.+|+|+|+||||+|||++|++++||..
T Consensus 2 ~l~FH~~~G~ni~l~~~~~~A~R~~~~f~~givFS~rPl~~~E~~~v~i~~~~~~w~G~l~~G~Ts~dP~~l~~~~lp~~ 81 (123)
T smart00588 2 PLRFHHRHGSNIRLSDSGRVARRSASDFCNALVFSARPLRINELFEVKIEKVVRKWSGALRFGVTTCDPATLRPASLPTN 81 (123)
T ss_pred CcccccccCCCeEECCCCcEEEcccCCcCceEEecCCCCcCCCEEEEEEEEecCCccCceEEEEecCCcccccCccCccc
Confidence 68999999999999999999999977799999999999999999999999999999999999999999999999999944
Q ss_pred c
Q psy269 341 S 341 (345)
Q Consensus 341 ~ 341 (345)
.
T Consensus 82 ~ 82 (123)
T smart00588 82 A 82 (123)
T ss_pred C
Confidence 3
No 6
>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i.e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.
Probab=99.90 E-value=5.8e-24 Score=162.66 Aligned_cols=68 Identities=49% Similarity=0.916 Sum_probs=52.2
Q ss_pred CCcccc-CCCCcEEEcCCCeeEEeccCCCCCeEEEeCCCCCCCCeEEEEEeeeCCCcccceEEeeeeeCC
Q psy269 261 PLPFHR-TIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNP 329 (345)
Q Consensus 261 ~l~FH~-~~G~~V~Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~~~vrI~~~~~~w~GsL~~GvT~~~P 329 (345)
+|+||+ .||+||+|++++++|+|. .+|++|||||+|||+.+|+|+|||++.+..|+|+|+||||+|||
T Consensus 1 pl~FH~~~~G~nV~L~~~~~~A~R~-~sf~~giVFS~rPl~~~E~~~v~I~~~~~~wsG~L~~GvT~~~P 69 (69)
T PF07177_consen 1 PLRFHPNVHGKNVRLSNDGTVARRV-SSFNNGIVFSSRPLRIGEKFEVRIDEVEPSWSGSLRIGVTSCDP 69 (69)
T ss_dssp S--EEC-EE-TTEEE-SSS-EEEES-T-SSS-EEEESS-B-TT-EEEEEEEEE-SSSSS--EEEEESS-C
T ss_pred CccccCcccCCCEEEcCCCeEEEec-ccCCceEEEecCCccCCCEEEEEEEecCCCceeEEEEeeEccCC
Confidence 589999 799999999999999994 89999999999999999999999999999999999999999998
No 7
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin []. Ca2+-release from the sarcoplasmic or endoplasmic reticulum, the intracellular Ca2+ store, is mediated by the ryanodine receptor (RyR) and/or the inositol trisphosphate receptor (IP3R).; GO: 0005515 protein binding; PDB: 2V24_A 3EK9_A 2AFJ_A 2IWG_E 3EMW_A 2WL1_A 3TOJ_B 2VOK_A 2VOL_B 2FNJ_A ....
Probab=97.31 E-value=0.0048 Score=50.58 Aligned_cols=97 Identities=21% Similarity=0.281 Sum_probs=64.6
Q ss_pred EEEEEEEeEcCCcceeeEEeeeecCCCC-cCcCCCCCCCCCcccccceeEeccc----------c----cccCCCcEEEE
Q psy269 76 KVYVKLLEISTNWSGVIRFGFTANDPAH-LKYALPRYVCPDLTNKPGYWAKALA----------E----RFADQETVLFY 140 (345)
Q Consensus 76 ~~~v~I~~~~~~wsG~l~~GvT~~dP~~-l~~~LP~~a~pdL~~~~~~W~~~~~----------~----~~~~~g~~l~~ 140 (345)
.|||+|..... +.|||++.+-.. ....+. ......|..... + .+...+|+|++
T Consensus 5 YwEV~v~~~~~-----~~iGv~~~~~~~~~~~~~~-------g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dvIG~ 72 (124)
T PF00622_consen 5 YWEVEVDSGGS-----ISIGVATSSASVSGDENLS-------GYDPFSWGFHGDGGKKYHGGTSEETGSPFQEPGDVIGC 72 (124)
T ss_dssp EEEEEETGGCT-----EEEEEEETTSEESSSTS-T-------TSSTTEEEEETTTTTEEESTSSSECSCTSSTTTSEEEE
T ss_pred EEEEEEecCcC-----EEEEEeECccccCCccccC-------CccccceeeeccccccceeecccccccccccCCcEEEE
Confidence 46888875444 999999877611 111111 112244543211 1 11224999999
Q ss_pred EEc-CCceEEEEEcCCcce-eeeecCCCCCceEEEEeccCCceEEEE
Q psy269 141 YVT-AAGDVHFGINGEEKG-VFFTGVETRGPLWAMFDIYGNSTAIQL 185 (345)
Q Consensus 141 ~~~-~~G~l~~~VNG~~~G-~~~~~V~~~~pLwAvvDvYG~t~~V~l 185 (345)
.++ ..|.|.|++||+..+ ..+..++...+||.+|-+++ ..+|++
T Consensus 73 ~lD~~~g~l~F~~ng~~~~~~~f~~~~~~~~l~P~v~~~~-~~~~~~ 118 (124)
T PF00622_consen 73 GLDLDNGELSFYKNGKFLGIYAFTDIDFSEPLYPAVSLGG-GQSVEL 118 (124)
T ss_dssp EEETTTTEEEEEETTEEEEEEEEESCTTSSSBEEEEEEES-TSEEEE
T ss_pred EEeecccEEEEEECCccceeEEEECCCCCCcEEEEEEecC-CCEEEE
Confidence 997 679999999999988 77877888789999999997 444554
No 8
>smart00449 SPRY Domain in SPla and the RYanodine Receptor. Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.
Probab=97.26 E-value=0.0082 Score=49.37 Aligned_cols=93 Identities=23% Similarity=0.384 Sum_probs=62.2
Q ss_pred EEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCCCCCcccccceeEeccc--------------ccccCCCcEEEEE
Q psy269 76 KVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALA--------------ERFADQETVLFYY 141 (345)
Q Consensus 76 ~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a~pdL~~~~~~W~~~~~--------------~~~~~~g~~l~~~ 141 (345)
.+||+|.+ ++.++|||.+.+=..-.... +-.....|+.... ..+...+|+|++.
T Consensus 5 YwEV~v~~-----~~~~~vGv~~~~~~r~~~~~-------~G~~~~sw~~~~~~g~~~~~~~~~~~~~~~~~~gd~iGv~ 72 (122)
T smart00449 5 YFEVEIFD-----GGHWRVGVATKSVPRGYFAL-------LGEDKGSWGYDGDGGKKYHNSTGPEYGLPLQEPGDVIGCF 72 (122)
T ss_pred EEEEEEcC-----CCeEEEEEEcCccCCCcccc-------CCCCCCEEEEEcCCCcEEeCCCCCccCccccCCCCEEEEE
Confidence 46888875 67899999865422100101 1112234542211 1222349999999
Q ss_pred Ec-CCceEEEEEcCCcc-eeeeecCCCCCceEEEEeccCCc
Q psy269 142 VT-AAGDVHFGINGEEK-GVFFTGVETRGPLWAMFDIYGNS 180 (345)
Q Consensus 142 ~~-~~G~l~~~VNG~~~-G~~~~~V~~~~pLwAvvDvYG~t 180 (345)
++ +.|+|.|+.||+.. ++++..++-.++|+.+|-+++..
T Consensus 73 lD~~~g~l~F~~ng~~~~~~~f~~~~~~~~l~P~~~~~~~~ 113 (122)
T smart00449 73 LDLEAGTISFYKNGKYLHGLAFFDVKFSGPLYPAVSLGSGC 113 (122)
T ss_pred EECCCCEEEEEECCCEeeeEEEeccCCCCcEeeEEEcCCCC
Confidence 97 67999999999998 78777787777999999999765
No 9
>KOG4030|consensus
Probab=95.96 E-value=0.3 Score=43.19 Aligned_cols=129 Identities=22% Similarity=0.400 Sum_probs=83.4
Q ss_pred CCCCCCCCccccc-CCCCceEEecCCeeEEecccCCCeEEEcCCcCCCC-CEEEEEEEeEcCCcceeeEEeeeecCCCCc
Q psy269 27 SGTNNLPPLYFHQ-VHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKIN-EKVYVKLLEISTNWSGVIRFGFTANDPAHL 104 (345)
Q Consensus 27 ~~~~~~~~l~FH~-~~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~-E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l 104 (345)
+-.+..+..+.-. .-|++|.|-.++...+-. |=+...-||..+ ..|+++|... ..| .||+-+..-. +
T Consensus 21 ~rl~e~P~V~LD~~hMG~dVvilk~g~RicGt-----GG~lAtaPlvQnKsYFevkiQ~t-G~W----giGlat~q~~-l 89 (197)
T KOG4030|consen 21 PRLNEVPTVRLDVGHMGKDVVILKEGERICGT-----GGALATAPLVQNKSYFEVKIQQT-GTW----GIGLATKQSP-L 89 (197)
T ss_pred hhhhcCCcEEeehhccCCcEEEEecCcEEecc-----CceeeeeeeecccceEEEEEeec-cee----eeeeeeccCc-c
Confidence 4445556777776 559999999888776643 234455577554 6789999753 445 4666543211 2
Q ss_pred CcCCCCCCCCCcccccceeEecc---------------cccccCCCcEEEEEEcCCceEEEEEcCCcceeeeecCCCCCc
Q psy269 105 KYALPRYVCPDLTNKPGYWAKAL---------------AERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGP 169 (345)
Q Consensus 105 ~~~LP~~a~pdL~~~~~~W~~~~---------------~~~~~~~g~~l~~~~~~~G~l~~~VNG~~~G~~~~~V~~~~p 169 (345)
. ..|-. | ...+|...- ...++.+||++++.-+ .=+|.|++||...-.-++||. .+
T Consensus 90 ~-~~p~g-~-----d~~sw~~r~dga~~hnnee~~r~pa~~~p~EGDvVGvayD-HVELnfY~NGKn~e~p~~gvR--G~ 159 (197)
T KOG4030|consen 90 D-KVPGG-C-----DEKSWGIRDDGAIAHNNEEVARMPATVFPEEGDVVGVAYD-HVELNFYVNGKNVEDPITGVR--GP 159 (197)
T ss_pred c-cCCCC-C-----cceeEEEccCCchhcccHHHhcCccccCCccCcEEEEEee-eEEEEEEEcCceecccccccc--cc
Confidence 1 23322 2 125786431 1124678999998766 579999999999888888876 48
Q ss_pred eEEEEec
Q psy269 170 LWAMFDI 176 (345)
Q Consensus 170 LwAvvDv 176 (345)
+|.||=|
T Consensus 160 vyPvvYV 166 (197)
T KOG4030|consen 160 VYPVVYV 166 (197)
T ss_pred eeeEEEe
Confidence 9988744
No 10
>KOG2626|consensus
Probab=93.00 E-value=0.52 Score=48.89 Aligned_cols=129 Identities=23% Similarity=0.400 Sum_probs=82.6
Q ss_pred CCCceEEecCCeeEEecccCCCeEEEcCCcCCCC-CEEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCCCCCcccc
Q psy269 41 HGENVRVSRDGTVAKRYESFCKGVAFSSRPVKIN-EKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNK 119 (345)
Q Consensus 41 ~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~-E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a~pdL~~~ 119 (345)
.-.++.|+.++.+|.-..+|+ .|=+++=+..| ..|+|+|++. .-.+++|+|.... =..|. | |-=.++
T Consensus 300 rA~ql~Is~drlt~tgeKGy~--MvRAshgv~~G~WYFEI~vd~~--pd~~a~RlGwsq~-~g~Lq------A-pvGYdk 367 (544)
T KOG2626|consen 300 RAEQLKISEDRLTATGEKGYR--MVRASHGVLEGAWYFEIKVDEM--PDDAAIRLGWSQL-YGNLQ------A-PVGYDK 367 (544)
T ss_pred ccccccccccceeeeccccee--eeeecccccccceeEEEEeecC--CCccceeeecccc-ccccc------c-cccccc
Confidence 567889999999998877774 34455556555 6889999887 5568899996331 11121 1 111233
Q ss_pred cce-eE--------eccccccc---CCCcEEEEEE---------------------------------------------
Q psy269 120 PGY-WA--------KALAERFA---DQETVLFYYV--------------------------------------------- 142 (345)
Q Consensus 120 ~~~-W~--------~~~~~~~~---~~g~~l~~~~--------------------------------------------- 142 (345)
.+| |- .++.+.|. .+||+|||++
T Consensus 368 fsY~wRdk~GtKfh~s~gk~Y~~gf~qGDvLGf~I~LP~~~~~~~~lp~~~kdk~lI~yK~~lyfe~~d~v~k~~k~l~~ 447 (544)
T KOG2626|consen 368 FSYGWRDKKGTKFHESLGKHYSDGFGQGDVLGFYINLPKDLSPEKYLPLTHKDKFLIKYKGHLYFEDPDNVAKIEKTLKI 447 (544)
T ss_pred ccccccccCCcchhhhhhhhhhhhccCCceEEEEEecCCcccccccCCccccccceeeeeeeeEEEccchhhhhhhcccc
Confidence 333 52 22333333 2466666654
Q ss_pred cCCceEEEEEcCCcceeeeecCCCCCceEEEEeccCCce
Q psy269 143 TAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNST 181 (345)
Q Consensus 143 ~~~G~l~~~VNG~~~G~~~~~V~~~~pLwAvvDvYG~t~ 181 (345)
.+.-+..|+.||..+|+++.+|-.-..-|--|-+|+.|+
T Consensus 448 ~pgS~I~f~KNG~~qG~Ay~ni~~~G~YyPaIS~yks~t 486 (544)
T KOG2626|consen 448 KPGSEIEFFKNGVSQGVAYENIYKAGAYYPAISIYKSCT 486 (544)
T ss_pred CCCceEEEeecccchhhhhhhhhccccccceeeecccce
Confidence 445667789999999999988863235778899996543
No 11
>KOG3953|consensus
Probab=84.53 E-value=2.7 Score=39.52 Aligned_cols=50 Identities=20% Similarity=0.484 Sum_probs=40.4
Q ss_pred CcEEEEEEc-CCceEEEEEcCCcceeeeecCCCCCceEEEE-eccCCceEEEEe
Q psy269 135 ETVLFYYVT-AAGDVHFGINGEEKGVFFTGVETRGPLWAMF-DIYGNSTAIQLI 186 (345)
Q Consensus 135 g~~l~~~~~-~~G~l~~~VNG~~~G~~~~~V~~~~pLwAvv-DvYG~t~~V~ll 186 (345)
++.+.+.++ .+|.+.|.+||+--|+++.+++ ++.||++| .+||.|. |++.
T Consensus 144 p~ri~viLDm~egtl~F~~~~e~LGvAFRgL~-~~~LYP~Vsav~g~~E-vtm~ 195 (242)
T KOG3953|consen 144 PDRILVILDMIEGTLSFAADGEYLGVAFRGLK-DKKLYPAVSAVWGHCE-VTMK 195 (242)
T ss_pred CceEEEEEeeccceEEEEECCeEEeeeecCCC-CCcceeeeeehhccee-EEEE
Confidence 455555554 8899999999999999999999 78999555 6889885 7665
No 12
>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white. A2M-like proteins are able to inhibit all four classes of proteinases by a 'trapping' mechanism. They have a peptide stretch, called the 'bait region', which contains specific cleavage sites for different proteinases. When a proteinase cleaves the bait region, a conformational change is induced in the protein, thus trapping the proteinase. The entrapped enzyme remains active against low molecular weight substrates, whilst its activity toward larger substrates is greatly reduced, due to steric hindrance. Following cleavage in the bait region, a thiol ester bond, formed between the side chains of a cysteine and a glutamine, is cleaved and mediates the covalent binding of the A2M-like protein to the proteinase. This family includes the N-terminal region of the alpha-2-macroglobulin family. The inhibitor domains belong to MEROPS inhibitor family I39.; GO: 0004866 endopeptidase inhibitor activity; PDB: 2B39_B 3KLS_B 3PRX_C 3KM9_B 3PVM_C 3CU7_A 4E0S_A 4A5W_A 4ACQ_C 2P9R_B ....
Probab=70.24 E-value=10 Score=30.00 Aligned_cols=20 Identities=20% Similarity=0.325 Sum_probs=17.7
Q ss_pred eEEEcCCcC-CCCCEEEEEEE
Q psy269 63 GVAFSSRPV-KINEKVYVKLL 82 (345)
Q Consensus 63 giVFS~RPl-~~~E~~~v~I~ 82 (345)
+.+|++||+ ++||.|.+++.
T Consensus 2 ~~i~TDr~iYrPGetV~~~~~ 22 (99)
T PF01835_consen 2 IFIQTDRPIYRPGETVHFRAI 22 (99)
T ss_dssp EEEEESSSEE-TTSEEEEEEE
T ss_pred EEEECCccCcCCCCEEEEEEE
Confidence 679999999 99999999987
No 13
>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white. A2M-like proteins are able to inhibit all four classes of proteinases by a 'trapping' mechanism. They have a peptide stretch, called the 'bait region', which contains specific cleavage sites for different proteinases. When a proteinase cleaves the bait region, a conformational change is induced in the protein, thus trapping the proteinase. The entrapped enzyme remains active against low molecular weight substrates, whilst its activity toward larger substrates is greatly reduced, due to steric hindrance. Following cleavage in the bait region, a thiol ester bond, formed between the side chains of a cysteine and a glutamine, is cleaved and mediates the covalent binding of the A2M-like protein to the proteinase. This family includes the N-terminal region of the alpha-2-macroglobulin family. The inhibitor domains belong to MEROPS inhibitor family I39.; GO: 0004866 endopeptidase inhibitor activity; PDB: 2B39_B 3KLS_B 3PRX_C 3KM9_B 3PVM_C 3CU7_A 4E0S_A 4A5W_A 4ACQ_C 2P9R_B ....
Probab=67.89 E-value=15 Score=28.95 Aligned_cols=41 Identities=17% Similarity=0.351 Sum_probs=28.2
Q ss_pred eEEEeCCCC-CCCCeEEEEEe--eeC--CCcccceEEeeeeeCCCC
Q psy269 291 GYVFTGRPV-QLGEKIVIQVL--ETE--SRYYGALALGLTSCNPAS 331 (345)
Q Consensus 291 glVfS~RPL-~~~E~~~vrI~--~~~--~~w~GsL~~GvT~~~P~~ 331 (345)
++++|+||+ ++||++.+++- ... ..-.....+-++-.||..
T Consensus 2 ~~i~TDr~iYrPGetV~~~~~~~~~~~~~~~~~~~~~~v~i~dp~g 47 (99)
T PF01835_consen 2 IFIQTDRPIYRPGETVHFRAIVRDLDNDFKPPANSPVTVTIKDPSG 47 (99)
T ss_dssp EEEEESSSEE-TTSEEEEEEEEEEECTTCSCESSEEEEEEEEETTS
T ss_pred EEEECCccCcCCCCEEEEEEEEeccccccccccCCceEEEEECCCC
Confidence 579999999 99999999998 444 122333555676677753
No 14
>KOG4367|consensus
Probab=47.00 E-value=87 Score=32.38 Aligned_cols=155 Identities=17% Similarity=0.144 Sum_probs=80.1
Q ss_pred CCCCCCCCCCCC---ccccCcCCCCCCCCCCC-CCCCccccc-CCCCceEEecCCeeEEec----ccCCCeEEEcCCcCC
Q psy269 2 DPLNFPSTNRPR---FFSCVTAPRTGSNSGTN-NLPPLYFHQ-VHGENVRVSRDGTVAKRY----ESFCKGVAFSSRPVK 72 (345)
Q Consensus 2 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~l~FH~-~~G~nV~Ls~~~~~A~R~----~sf~~giVFS~RPl~ 72 (345)
|-|.|-++-..| |-+.|..|-|-+--... ...=+.|-+ -.-+.+.|+++..+..-. ...-..|.||.
T Consensus 498 dglhfns~y~arvka~n~tg~s~ys~tl~lqts~vawfqlt~spsqrdmilsnecatlsgssleyrtilgsiafsk---- 573 (699)
T KOG4367|consen 498 DGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEVAWFQLTPSPSQRDMILSNECATLSGSSLEYRTILGSIAFSK---- 573 (699)
T ss_pred cceecchhHHHHHHHhhccCCCcccceeEeeecceeeeeccCCchhhceeeecccceecccccchheeeeeccccc----
Confidence 556777765544 56778887776642211 112233333 345678888876554321 11112233332
Q ss_pred CCCEEEEEEEeEcCCcceeeEEeeeecCCCCcCc-CCCCC--CCCCcccccceeEeccc------ccccCCCcEEEEEEc
Q psy269 73 INEKVYVKLLEISTNWSGVIRFGFTANDPAHLKY-ALPRY--VCPDLTNKPGYWAKALA------ERFADQETVLFYYVT 143 (345)
Q Consensus 73 ~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~-~LP~~--a~pdL~~~~~~W~~~~~------~~~~~~g~~l~~~~~ 143 (345)
-=-.++|.|++.+.. .-+.|||.. |+-.+. .|=++ +-..-++....|.+.-. ..-...|.+||+.++
T Consensus 574 gvhywevtidrhdgn--sdivigvaq--pavnrnvmlgkdlhgwsmyvdgerswylhnethhnrvlggvtrgtvigvrld 649 (699)
T KOG4367|consen 574 GVHYWEVTIDRHDGN--SDIVIGVAQ--PAVNRNVMLGKDLHGWSMYVDGERSWYLHNETHHNRVLGGVTRGTVIGVRLD 649 (699)
T ss_pred ceeEEEEEEeccCCC--CCceEEecc--hhhhhceeecccccceeEEEcCcceeEEeccccccccccccccccEEEEEEe
Confidence 113578888875443 236777743 332221 11111 00011222334544211 111356889999987
Q ss_pred -CCceEEEEEcCCccee-eeecC
Q psy269 144 -AAGDVHFGINGEEKGV-FFTGV 164 (345)
Q Consensus 144 -~~G~l~~~VNG~~~G~-~~~~V 164 (345)
..|.|-|.||++..+. +++++
T Consensus 650 cdrgtmeytvndrqddsmaftnm 672 (699)
T KOG4367|consen 650 CDRGTMEYTVNDRQDDSMAFTNM 672 (699)
T ss_pred ccCCceEEEeccccCCceeeecc
Confidence 6799999999986654 55554
No 15
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=30.14 E-value=2.1e+02 Score=28.15 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=56.4
Q ss_pred CCCCccccCCCCcEE--EcCCCeeEEeccCCCCCeEEEeCCCCCCCCeEEEEEeee-CCCcccceEEeeeeeCCCCCCCC
Q psy269 259 LVPLPFHRTIGRNVR--LSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLET-ESRYYGALALGLTSCNPASLKPS 335 (345)
Q Consensus 259 ~~~l~FH~~~G~~V~--Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~~~vrI~~~-~~~w~GsL~~GvT~~~P~~L~~~ 335 (345)
...+.+|+.-|. |+ |..++.+..+. ..+..--.|.-..+.+|+++.|||.-. ...-...+.|=.++-.+.....+
T Consensus 95 ~~~l~v~~C~G~-V~v~i~r~gk~l~~~-~~v~~~~~f~l~~~~~g~~Yliri~~~~~~e~~~~~kV~aast~~~~~~~P 172 (300)
T PF10179_consen 95 SLWLFVQSCSGS-VRVEISRNGKILLSQ-KNVEGLRHFRLSGVKPGERYLIRIQISNSDEGPSTFKVQAASTNPSKQPYP 172 (300)
T ss_pred cEEEEEEeCCCe-EEEEEEECCeEEeee-ecccceEEEEECCCCCCCeEEEEEEccCCCCCceEEEEEEecCCcccCCCC
Confidence 345667775554 55 56677777676 567777778889999999999999322 22234556655567788888889
Q ss_pred CCCccc
Q psy269 336 VFLLSS 341 (345)
Q Consensus 336 ~Lp~~~ 341 (345)
+||...
T Consensus 173 ~LP~d~ 178 (300)
T PF10179_consen 173 QLPDDT 178 (300)
T ss_pred CCCCCC
Confidence 999764
No 16
>PF10989 DUF2808: Protein of unknown function (DUF2808); InterPro: IPR021256 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=29.11 E-value=2.1e+02 Score=24.60 Aligned_cols=40 Identities=25% Similarity=0.259 Sum_probs=33.7
Q ss_pred EEcCCcCCCCCEEEEEEEeE-cCCcceeeEEeeeecCCCCc
Q psy269 65 AFSSRPVKINEKVYVKLLEI-STNWSGVIRFGFTANDPAHL 104 (345)
Q Consensus 65 VFS~RPl~~~E~~~v~I~~~-~~~wsG~l~~GvT~~dP~~l 104 (345)
|+=+.|+.+|..+.|.+..+ .+.+.|.-.|+++..-|+..
T Consensus 93 I~f~~PV~pG~tv~V~l~~v~NP~~~G~Y~f~v~a~p~G~~ 133 (146)
T PF10989_consen 93 ITFDEPVPPGTTVTVVLSPVRNPRSGGTYQFNVTAFPPGDN 133 (146)
T ss_pred EEeCCCCCCCCEEEEEEEeeeCCCCCCeEEEEEEEECCCCC
Confidence 44567999999999999666 67777999999999988875
No 17
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=28.21 E-value=2e+02 Score=28.24 Aligned_cols=78 Identities=19% Similarity=0.288 Sum_probs=51.8
Q ss_pred CcccccCCCC-ceEEecCCeeEEecccCCCeEEEcCCcCCCCCEEEEEEEeE-cCCcceeeEEeeeecCCCCcCc-CCCC
Q psy269 34 PLYFHQVHGE-NVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEI-STNWSGVIRFGFTANDPAHLKY-ALPR 110 (345)
Q Consensus 34 ~l~FH~~~G~-nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~E~~~v~I~~~-~~~wsG~l~~GvT~~dP~~l~~-~LP~ 110 (345)
.|.+|++-|. +|.|..+|++..+.+.+..--.|.-..+.+||++.|+|.-. ...-...++|=.++-.+....+ .||.
T Consensus 97 ~l~v~~C~G~V~v~i~r~gk~l~~~~~v~~~~~f~l~~~~~g~~Yliri~~~~~~e~~~~~kV~aast~~~~~~~P~LP~ 176 (300)
T PF10179_consen 97 WLFVQSCSGSVRVEISRNGKILLSQKNVEGLRHFRLSGVKPGERYLIRIQISNSDEGPSTFKVQAASTNPSKQPYPQLPD 176 (300)
T ss_pred EEEEEeCCCeEEEEEEECCeEEeeeecccceEEEEECCCCCCCeEEEEEEccCCCCCceEEEEEEecCCcccCCCCCCCC
Confidence 3556665444 34456799999988778777888889999999999998321 2223455666545666666554 5554
Q ss_pred C
Q psy269 111 Y 111 (345)
Q Consensus 111 ~ 111 (345)
+
T Consensus 177 d 177 (300)
T PF10179_consen 177 D 177 (300)
T ss_pred C
Confidence 3
No 18
>KOG0349|consensus
Probab=21.52 E-value=1e+02 Score=32.24 Aligned_cols=37 Identities=27% Similarity=0.484 Sum_probs=30.2
Q ss_pred CCcEEEEEEc-CCceEEEEEcCCcceeeeecCCC---CCceE
Q psy269 134 QETVLFYYVT-AAGDVHFGINGEEKGVFFTGVET---RGPLW 171 (345)
Q Consensus 134 ~g~~l~~~~~-~~G~l~~~VNG~~~G~~~~~V~~---~~pLw 171 (345)
-.|+||.|++ .+++|.|..||++-|+++. ||. .+.||
T Consensus 187 ~~DvIGCyLDld~~~v~fsKNG~~lg~AF~-ip~~~kn~~lf 227 (725)
T KOG0349|consen 187 LNDVIGCYLDLDSRTVWFSKNGEQLGAAFS-IPVKYKNSNLF 227 (725)
T ss_pred ccceeeEEEeccCceEEEecCccccceeEE-cChhhcccccc
Confidence 3678999998 6689999999999999996 874 34455
No 19
>COG3269 Predicted RNA-binding protein, contains TRAM domain [General function prediction only]
Probab=21.42 E-value=2.1e+02 Score=22.20 Aligned_cols=38 Identities=24% Similarity=0.388 Sum_probs=30.4
Q ss_pred cCCcCCCCCEEEEEEEeEcCCcceeeEE-eeeecCCCCc
Q psy269 67 SSRPVKINEKVYVKLLEISTNWSGVIRF-GFTANDPAHL 104 (345)
Q Consensus 67 S~RPl~~~E~~~v~I~~~~~~wsG~l~~-GvT~~dP~~l 104 (345)
..-|+..||.++|+|+++..+=.|--++ ||+---|+.-
T Consensus 9 ~~~PVeeGe~y~V~I~d~g~~GDGiarveGfvVFVp~a~ 47 (73)
T COG3269 9 RTPPVEEGETYEVEIEDVGDQGDGIARVEGFVVFVPGAE 47 (73)
T ss_pred CCCCcccCCEEEEEEEEeccCCCceEEEEEEEEEeCCCC
Confidence 4679999999999999998888885433 8887777654
No 20
>COG4918 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.60 E-value=1e+02 Score=25.58 Aligned_cols=41 Identities=20% Similarity=0.105 Sum_probs=34.2
Q ss_pred EEcCCceEEEEEcCCcceeeeecCCCCCceEEEEeccCCceEEE
Q psy269 141 YVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQ 184 (345)
Q Consensus 141 ~~~~~G~l~~~VNG~~~G~~~~~V~~~~pLwAvvDvYG~t~~V~ 184 (345)
-++..++.|+.+|-|-.+-+.+||++ +|-|-..-|.+.+|.
T Consensus 18 d~nl~~~~hl~ydtEgc~Ca~SGi~t---~rlvae~tg~d~~id 58 (114)
T COG4918 18 DVNLVFDDHLLYDTEGCACAGSGIST---YRLVAEETGFDASID 58 (114)
T ss_pred ccCcCccceEEEeccccccccCCcce---EEEEEeccCcccccc
Confidence 35677889999999999999999986 999888888777654
Done!