Query psy2691
Match_columns 181
No_of_seqs 154 out of 259
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 22:45:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2691.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2691hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkq_B Coatomer subunit alpha; 100.0 3.6E-43 1.2E-47 287.3 15.7 132 1-133 46-177 (177)
2 3mkq_A Coatomer beta'-subunit; 99.7 6.6E-18 2.2E-22 152.6 12.6 86 2-87 694-779 (814)
3 3mkq_A Coatomer beta'-subunit; 91.2 1.4 4.8E-05 39.4 10.2 84 14-97 664-763 (814)
4 2pm7_A Protein WEB1, protein t 83.5 1.8 6.1E-05 38.5 5.9 41 48-88 147-187 (399)
5 4ady_A RPN2, 26S proteasome re 68.8 16 0.00053 36.4 8.4 77 4-80 173-269 (963)
6 1xi4_A Clathrin heavy chain; a 68.2 22 0.00076 37.3 9.5 81 2-82 1118-1246(1630)
7 3mkq_B Coatomer subunit alpha; 62.6 56 0.0019 25.9 10.8 92 3-97 19-116 (177)
8 3mzk_B Protein transport prote 61.5 11 0.00039 33.9 5.5 41 49-89 155-195 (441)
9 1xi4_A Clathrin heavy chain; a 60.7 20 0.0007 37.6 7.7 39 2-40 1208-1246(1630)
10 3gw4_A Uncharacterized protein 58.8 45 0.0015 23.5 8.2 68 2-69 39-132 (203)
11 1wdy_A 2-5A-dependent ribonucl 56.2 49 0.0017 24.9 7.6 96 2-99 115-245 (285)
12 1b89_A Protein (clathrin heavy 56.2 35 0.0012 30.8 7.7 40 2-41 135-174 (449)
13 3eu9_A Huntingtin-interacting 55.9 57 0.002 23.9 8.4 93 2-95 19-131 (240)
14 2etb_A Transient receptor pote 55.7 29 0.001 26.4 6.3 94 2-95 100-243 (256)
15 3v31_A Ankyrin repeat family A 53.5 56 0.0019 23.0 8.0 90 2-94 13-123 (167)
16 2jab_A H10-2-G3; HER2, darpin, 53.3 52 0.0018 22.6 8.0 17 22-38 18-34 (136)
17 3k9i_A BH0479 protein; putativ 53.1 44 0.0015 22.2 6.2 47 2-48 3-60 (117)
18 2lni_A Stress-induced-phosphop 52.4 44 0.0015 21.5 7.7 44 2-45 29-80 (133)
19 1n0r_A 4ANK, 4 ankyrin repeats 52.0 47 0.0016 21.7 8.2 12 3-14 13-24 (126)
20 3jxi_A Vanilloid receptor-rela 50.6 23 0.00079 27.0 4.9 65 28-95 59-162 (260)
21 2zgd_A 3 repeat synthetic anky 50.4 47 0.0016 22.2 6.1 59 12-71 18-80 (110)
22 3ulq_A Response regulator aspa 49.0 83 0.0028 25.2 8.3 68 2-69 197-289 (383)
23 4i17_A Hypothetical protein; T 48.6 77 0.0026 23.2 8.2 69 2-70 55-143 (228)
24 2dba_A Smooth muscle cell asso 48.5 56 0.0019 21.5 7.9 43 2-44 41-94 (148)
25 2rfa_A Transient receptor pote 48.2 81 0.0028 23.3 7.8 91 2-95 13-143 (232)
26 2pnn_A Transient receptor pote 47.3 41 0.0014 25.9 6.0 91 2-95 23-170 (273)
27 1ouv_A Conserved hypothetical 45.7 94 0.0032 23.4 8.3 19 28-46 163-181 (273)
28 1ouv_A Conserved hypothetical 45.2 96 0.0033 23.3 8.1 68 2-69 91-175 (273)
29 3ulq_A Response regulator aspa 44.7 86 0.003 25.1 7.8 73 2-74 237-336 (383)
30 3sz7_A HSC70 cochaperone (SGT) 44.6 77 0.0026 22.1 7.9 68 2-69 24-104 (164)
31 3ljn_A Hypothetical protein; a 44.4 69 0.0024 25.8 7.1 93 2-95 148-266 (364)
32 3bg1_B Nucleoporin NUP145; NPC 43.8 75 0.0026 28.5 7.8 49 44-92 177-225 (442)
33 2pl2_A Hypothetical conserved 43.6 57 0.0019 24.4 6.1 68 3-70 98-177 (217)
34 3rjv_A Putative SEL1 repeat pr 43.6 65 0.0022 24.0 6.5 68 3-71 32-116 (212)
35 3b7b_A Euchromatic histone-lys 43.5 77 0.0026 23.5 6.9 90 2-94 21-132 (237)
36 1elw_A TPR1-domain of HOP; HOP 43.1 58 0.002 20.2 7.9 40 2-41 17-64 (118)
37 1ihb_A P18-INK4C(INK6), cyclin 43.0 81 0.0028 21.8 7.4 91 2-95 15-125 (162)
38 2qfc_A PLCR protein; TPR, HTH, 42.7 39 0.0013 26.4 5.2 40 2-41 168-222 (293)
39 2dzn_A Probable 26S proteasome 41.7 73 0.0025 23.4 6.4 77 22-99 111-200 (228)
40 2y1l_E Darpin-8.4; hydrolase-i 41.5 92 0.0031 22.1 7.8 91 2-95 24-135 (169)
41 2rfa_A Transient receptor pote 41.1 1.1E+02 0.0036 22.6 7.7 95 2-96 85-220 (232)
42 1awc_B Protein (GA binding pro 40.6 89 0.003 21.6 6.9 91 2-95 12-122 (153)
43 3f6q_A Integrin-linked protein 40.2 65 0.0022 23.0 5.8 16 22-37 9-24 (179)
44 2etb_A Transient receptor pote 39.8 82 0.0028 23.8 6.6 92 2-94 56-202 (256)
45 3vtx_A MAMA; tetratricopeptide 39.8 94 0.0032 21.7 7.2 68 2-69 18-98 (184)
46 2kck_A TPR repeat; tetratricop 39.8 65 0.0022 19.8 6.8 12 3-14 20-31 (112)
47 3d9h_A CDNA FLJ77766, highly s 38.8 1.4E+02 0.0047 23.4 8.0 45 49-94 192-243 (285)
48 2pnn_A Transient receptor pote 38.6 80 0.0028 24.2 6.4 92 2-95 111-255 (273)
49 3u3w_A Transcriptional activat 38.5 22 0.00077 27.8 3.2 45 2-46 168-231 (293)
50 3v30_A DNA-binding protein rfx 38.4 1E+02 0.0035 21.7 7.5 90 2-94 12-123 (172)
51 3twr_A Tankyrase-2; ankyrin re 38.0 94 0.0032 21.7 6.3 92 2-94 18-129 (165)
52 2dzn_A Probable 26S proteasome 37.8 1.2E+02 0.004 22.2 8.3 91 2-95 12-129 (228)
53 2ifu_A Gamma-SNAP; membrane fu 37.6 1.5E+02 0.005 23.3 8.2 15 56-70 207-221 (307)
54 3jro_A Fusion protein of prote 37.2 35 0.0012 31.1 4.7 43 48-90 490-532 (753)
55 2fbn_A 70 kDa peptidylprolyl i 37.0 1.1E+02 0.0039 21.9 8.0 68 2-69 51-147 (198)
56 2vxg_A LD41624, GE-1, CG6181-P 36.8 39 0.0013 25.8 4.2 40 58-97 1-40 (139)
57 4a1s_A PINS, partner of inscut 36.6 1.1E+02 0.0038 24.3 7.1 14 20-33 268-281 (411)
58 1xnf_A Lipoprotein NLPI; TPR, 36.5 1.2E+02 0.0043 22.1 7.7 69 2-70 56-137 (275)
59 3eu9_A Huntingtin-interacting 36.3 64 0.0022 23.6 5.3 68 2-70 52-131 (240)
60 2f8y_A Notch homolog 1, transl 36.1 1.2E+02 0.0043 22.0 7.6 91 2-95 35-147 (223)
61 1awc_B Protein (GA binding pro 35.9 1.1E+02 0.0036 21.2 6.2 76 17-95 1-89 (153)
62 2pm7_A Protein WEB1, protein t 35.7 1E+02 0.0035 27.1 7.3 94 2-97 156-255 (399)
63 2y1l_E Darpin-8.4; hydrolase-i 35.3 1.2E+02 0.004 21.5 7.8 77 18-95 14-102 (169)
64 1ikn_D Protein (I-kappa-B-alph 35.3 40 0.0014 25.3 4.1 71 21-94 81-172 (236)
65 1a17_A Serine/threonine protei 35.2 1E+02 0.0034 20.7 7.9 69 2-70 26-107 (166)
66 1qqe_A Vesicular transport pro 35.0 1.6E+02 0.0054 22.9 8.1 69 2-70 50-144 (292)
67 3t8k_A Uncharacterized protein 34.8 37 0.0013 25.5 3.8 61 22-82 10-86 (186)
68 2rfm_A Putative ankyrin repeat 34.7 1.3E+02 0.0043 21.7 7.7 91 2-95 45-156 (192)
69 3urz_A Uncharacterized protein 34.1 1.4E+02 0.0047 21.9 8.0 69 2-70 17-114 (208)
70 3u4t_A TPR repeat-containing p 34.1 1.4E+02 0.0048 22.0 8.1 69 2-70 50-134 (272)
71 4gco_A Protein STI-1; structur 34.0 1.1E+02 0.0038 20.8 7.6 43 2-44 26-76 (126)
72 4hbd_A KN motif and ankyrin re 33.5 1.4E+02 0.0046 23.4 7.1 96 2-98 121-241 (276)
73 3d9h_A CDNA FLJ77766, highly s 33.5 1.7E+02 0.0059 22.8 8.1 20 50-70 128-147 (285)
74 3jxi_A Vanilloid receptor-rela 33.4 72 0.0025 24.2 5.3 94 2-97 103-249 (260)
75 1s70_B 130 kDa myosin-binding 33.2 1E+02 0.0034 23.7 6.2 73 20-95 42-128 (299)
76 3mv2_B Coatomer subunit epsilo 32.8 95 0.0032 26.4 6.4 67 2-68 149-235 (310)
77 1ihg_A Cyclophilin 40; ppiase 31.6 1.6E+02 0.0054 24.6 7.6 68 2-69 236-332 (370)
78 2ho1_A Type 4 fimbrial biogene 31.6 1.5E+02 0.0051 21.6 7.5 71 2-72 50-133 (252)
79 3v30_A DNA-binding protein rfx 31.3 1.4E+02 0.0046 21.0 7.8 71 22-95 6-91 (172)
80 1kt0_A FKBP51, 51 kDa FK506-bi 31.2 1.8E+02 0.0063 24.7 8.1 69 2-70 281-377 (457)
81 2b0o_E UPLC1; arfgap, structur 30.9 1.8E+02 0.0061 23.4 7.6 17 21-37 154-170 (301)
82 1n11_A Ankyrin; clathrin, BAND 30.2 1.5E+02 0.005 24.4 7.1 90 2-94 24-134 (437)
83 2c2l_A CHIP, carboxy terminus 30.1 1.3E+02 0.0043 23.6 6.4 69 2-70 17-98 (281)
84 1ycs_B 53BP2, P53BP2; ankyrin 30.0 57 0.0019 24.9 4.2 91 2-95 15-125 (239)
85 3aji_A 26S proteasome non-ATPa 30.0 1.6E+02 0.0053 21.6 6.6 17 22-38 10-26 (231)
86 2aja_A Ankyrin repeat family p 29.8 2.4E+02 0.0083 23.8 8.6 46 48-94 164-220 (376)
87 2fo1_E LIN-12 protein; beta-ba 29.8 1.7E+02 0.0057 24.0 7.3 90 4-94 250-367 (373)
88 1xnf_A Lipoprotein NLPI; TPR, 29.8 1.6E+02 0.0056 21.4 7.4 66 2-67 90-167 (275)
89 3q49_B STIP1 homology and U bo 29.5 1.2E+02 0.0041 19.8 8.1 43 2-44 22-72 (137)
90 3hra_A Ankyrin repeat family p 29.0 1.6E+02 0.0054 21.0 7.8 69 2-71 49-129 (201)
91 3aji_A 26S proteasome non-ATPa 28.9 1.7E+02 0.0058 21.4 7.4 92 2-94 16-127 (231)
92 3utm_A Tankyrase-1; tankyrase, 28.7 93 0.0032 24.2 5.3 93 2-95 34-146 (351)
93 3hra_A Ankyrin repeat family p 28.7 1.2E+02 0.0041 21.7 5.7 75 22-97 9-96 (201)
94 1bd8_A P19INK4D CDK4/6 inhibit 28.2 1.5E+02 0.005 20.4 6.8 91 2-95 12-123 (156)
95 3u3w_A Transcriptional activat 28.1 1E+02 0.0036 23.8 5.5 68 2-69 88-180 (293)
96 2q7f_A YRRB protein; TPR, prot 28.0 1.7E+02 0.0056 20.9 8.2 68 2-69 70-150 (243)
97 2vq2_A PILW, putative fimbrial 27.8 1.6E+02 0.0054 20.6 9.1 67 3-69 91-172 (225)
98 3kea_A K1L; tropism, ANK repea 27.6 92 0.0031 24.5 5.2 93 2-95 72-183 (285)
99 3hym_B Cell division cycle pro 27.3 2E+02 0.0067 21.6 7.8 44 2-45 206-266 (330)
100 2fo1_E LIN-12 protein; beta-ba 27.3 1.5E+02 0.0052 24.2 6.7 96 2-97 176-303 (373)
101 3rkv_A Putative peptidylprolyl 27.0 1.6E+02 0.0053 20.3 7.9 44 2-45 24-93 (162)
102 3q15_A PSP28, response regulat 27.0 2.4E+02 0.0082 22.5 8.4 12 21-32 228-239 (378)
103 2y4t_A DNAJ homolog subfamily 26.6 2.3E+02 0.0077 22.6 7.4 17 21-37 66-82 (450)
104 2gw1_A Mitochondrial precursor 26.5 2.6E+02 0.0087 22.6 7.9 68 2-69 19-98 (514)
105 3uq3_A Heat shock protein STI1 26.3 1.8E+02 0.0062 20.8 8.2 69 2-70 18-105 (258)
106 4hbd_A KN motif and ankyrin re 26.2 1.7E+02 0.006 22.8 6.6 74 20-95 113-205 (276)
107 2xpi_A Anaphase-promoting comp 25.8 2.9E+02 0.01 23.1 8.8 69 2-70 318-399 (597)
108 1hh8_A P67PHOX, NCF-2, neutrop 25.7 1.8E+02 0.0061 20.6 8.5 69 2-70 19-97 (213)
109 2xai_A ASB-9, ankyrin repeat a 25.6 2.2E+02 0.0076 21.6 7.7 93 2-95 13-123 (261)
110 3sf4_A G-protein-signaling mod 25.5 2.3E+02 0.008 21.9 7.5 22 18-39 230-251 (406)
111 3fp2_A TPR repeat-containing p 25.4 2.3E+02 0.0079 23.2 7.4 68 2-69 289-369 (537)
112 2xcb_A PCRH, regulatory protei 25.4 1.6E+02 0.0055 19.9 7.7 67 2-68 31-110 (142)
113 2fo7_A Synthetic consensus TPR 25.4 1.3E+02 0.0044 18.8 7.7 41 3-43 15-63 (136)
114 1p5q_A FKBP52, FK506-binding p 25.4 2.7E+02 0.0091 22.4 8.1 68 2-69 160-255 (336)
115 2vyi_A SGTA protein; chaperone 25.1 1.3E+02 0.0045 18.8 7.9 42 2-43 25-74 (131)
116 3cv0_A Peroxisome targeting si 24.9 2.2E+02 0.0074 21.3 7.4 69 2-70 151-232 (327)
117 3ehr_A Osteoclast-stimulating 24.3 68 0.0023 23.9 3.6 77 16-95 71-162 (222)
118 2if4_A ATFKBP42; FKBP-like, al 24.0 1.7E+02 0.0057 23.8 6.2 18 1-18 191-208 (338)
119 2aja_A Ankyrin repeat family p 23.9 3E+02 0.01 23.3 8.0 72 22-94 167-246 (376)
120 3uq3_A Heat shock protein STI1 23.6 2E+02 0.007 20.5 7.1 14 56-69 151-164 (258)
121 2y4t_A DNAJ homolog subfamily 23.5 2.4E+02 0.0081 22.5 7.0 41 2-42 190-238 (450)
122 2vq2_A PILW, putative fimbrial 23.5 1.9E+02 0.0066 20.1 7.3 69 2-70 21-103 (225)
123 4i17_A Hypothetical protein; T 23.4 2.1E+02 0.0073 20.6 8.3 69 2-70 20-102 (228)
124 1w3b_A UDP-N-acetylglucosamine 23.4 2.7E+02 0.0093 21.9 8.3 42 2-43 250-299 (388)
125 4gpm_A Engineered protein OR26 23.0 2.2E+02 0.0076 20.7 7.7 90 2-94 14-124 (169)
126 2f8y_A Notch homolog 1, transl 22.8 2.2E+02 0.0076 20.6 7.7 91 2-95 68-180 (223)
127 1bi7_B P16INK4A, MTS1, multipl 22.5 1E+02 0.0034 21.6 4.1 90 2-94 22-132 (156)
128 2xpi_A Anaphase-promoting comp 22.5 2.9E+02 0.0098 23.1 7.6 22 20-41 446-467 (597)
129 2q7f_A YRRB protein; TPR, prot 22.5 2.1E+02 0.0073 20.3 8.5 68 2-69 104-184 (243)
130 2rmf_A Urocortin, HUCN1; CRF l 22.5 75 0.0026 19.7 2.8 27 33-59 13-39 (40)
131 3sz7_A HSC70 cochaperone (SGT) 22.4 1.8E+02 0.0062 20.0 5.5 45 2-54 58-102 (164)
132 1ji5_A DLP-1; dodecamer, four- 22.3 1.2E+02 0.0041 21.6 4.5 40 30-69 100-139 (142)
133 1yyh_A HN1;, notch 1, ankyrin 21.8 2.1E+02 0.0073 21.5 6.1 21 49-70 159-179 (253)
134 3jue_A Arfgap with coiled-coil 21.8 3.6E+02 0.012 22.7 8.4 91 3-94 211-322 (368)
135 3lvq_E ARF-GAP with SH3 domain 21.6 1.7E+02 0.0058 25.3 6.1 90 2-94 142-261 (497)
136 3hym_B Cell division cycle pro 21.5 2.6E+02 0.0088 20.9 8.8 21 21-41 165-185 (330)
137 3as5_A MAMA; tetratricopeptide 21.5 1.9E+02 0.0064 19.3 8.6 18 21-38 48-65 (186)
138 3ieg_A DNAJ homolog subfamily 21.4 2.6E+02 0.009 21.0 8.7 21 21-41 194-214 (359)
139 3kea_A K1L; tropism, ANK repea 21.4 2.9E+02 0.01 21.5 10.8 93 2-95 41-151 (285)
140 3vtx_A MAMA; tetratricopeptide 21.3 2.1E+02 0.0072 19.8 7.8 49 21-69 79-132 (184)
141 1s70_B 130 kDa myosin-binding 21.0 2.8E+02 0.0096 21.1 7.4 69 2-71 50-129 (299)
142 3rjv_A Putative SEL1 repeat pr 20.5 2.6E+02 0.0089 20.6 9.2 67 4-70 68-155 (212)
143 1jig_A DLP-2; dodecamer, four- 20.5 1.3E+02 0.0046 21.5 4.5 39 31-69 105-143 (146)
144 1b89_A Protein (clathrin heavy 20.3 64 0.0022 29.1 3.1 49 33-81 124-172 (449)
145 2e2e_A Formate-dependent nitri 20.2 2.2E+02 0.0076 19.6 7.3 16 21-36 50-65 (177)
146 3u4t_A TPR repeat-containing p 20.2 2.6E+02 0.0089 20.4 8.1 70 1-70 15-100 (272)
147 3aaa_C Myotrophin, protein V-1 20.2 2E+02 0.0067 19.0 6.1 74 19-95 8-95 (123)
148 1d9s_A Cyclin-dependent kinase 20.1 1.5E+02 0.005 20.1 4.5 16 22-37 16-31 (136)
149 2ho1_A Type 4 fimbrial biogene 20.1 2.5E+02 0.0086 20.2 9.4 22 20-41 110-131 (252)
150 1n0q_A 3ANK, 3 ankyrin repeats 20.0 1.7E+02 0.0059 18.3 6.2 69 23-94 7-89 (93)
No 1
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-43 Score=287.28 Aligned_cols=132 Identities=32% Similarity=0.515 Sum_probs=121.2
Q ss_pred CCccHHHHHHHHHHhcCchhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHHHHHHhhCCHHHHHHHHHHcCCchHHHHHH
Q psy2691 1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTA 80 (181)
Q Consensus 1 ~qGn~~laE~~yq~~kdfd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f~~~l~lgdv~~rv~vL~~~g~~plAyl~A 80 (181)
+||||+|||+|||++|||++|+|||++|||.++|+||++||+.+|++|++|+++||+||+++||++|+++||+||||+||
T Consensus 46 ~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~eA~~~A 125 (177)
T 3mkq_B 46 AQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVA 125 (177)
T ss_dssp HTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcHHHHHHHHhhCCCCCCCCCCCCCCCCcccCCCCccccCCCCCCcccc
Q psy2691 81 ATHGLSEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTV 133 (181)
Q Consensus 81 kt~g~~e~a~~i~~~~~~~~~~~~lp~~~~~~~~~~P~~p~~~~~~nWPll~~ 133 (181)
+|||++++|++|++++|++++++.+|+. ..+.+.+||+|+.+...|||++..
T Consensus 126 ~t~g~~~~a~~~~~~~~~~~~~~~~p~~-~~~~~~~p~~~~~~~~~nwp~~~~ 177 (177)
T 3mkq_B 126 KANGDEAAASAFLEQAEVDEQDVTLPDQ-MDASNFVQRPVISKPLEKWPLKEA 177 (177)
T ss_dssp HHTTCHHHHHHHHHHTTCCGGGCCCCSC-CCCSCCSCCCCCSSCCSSCCBCCC
T ss_pred HHcCcHHHHHHHHHHhCCccccccCCCc-CCcccCCCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999889987 444433666666445699999863
No 2
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.75 E-value=6.6e-18 Score=152.64 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=84.7
Q ss_pred CccHHHHHHHHHHhcCchhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHHHHHHhhCCHHHHHHHHHHcCCchHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAA 81 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f~~~l~lgdv~~rv~vL~~~g~~plAyl~Ak 81 (181)
+||+++|++||++++||++|.|||.++||.++|.+|+++|+.+|+++.+|++++++|++++|++++++++|+++|+.+|+
T Consensus 694 ~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~~~~~~A~~lA~ 773 (814)
T 3mkq_A 694 RFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGS 773 (814)
T ss_dssp TTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHHcCChHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcH
Q psy2691 82 THGLSE 87 (181)
Q Consensus 82 t~g~~e 87 (181)
+|++.+
T Consensus 774 ~~~~~~ 779 (814)
T 3mkq_A 774 TYGLGD 779 (814)
T ss_dssp HTTCCH
T ss_pred HhCCCh
Confidence 999876
No 3
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.23 E-value=1.4 Score=39.43 Aligned_cols=84 Identities=13% Similarity=0.005 Sum_probs=46.6
Q ss_pred HhcCchhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHHHHHHhhCCHHH----------------HHHHHHHcCCchHHH
Q psy2691 14 RTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGE----------------RIKILKSCGQTSLAY 77 (181)
Q Consensus 14 ~~kdfd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f~~~l~lgdv~~----------------rv~vL~~~g~~plAy 77 (181)
+.++|+...=++....+...-++|++.|.+.+++..|-.|+--+||... ..++....|++..|+
T Consensus 664 ~~~~~~~A~~~~~~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~ 743 (814)
T 3mkq_A 664 KVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAF 743 (814)
T ss_dssp HHTCHHHHHHHHTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hcCCHHHHHHHHHhhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHH
Confidence 3455555555555555556666666666666666666666555555543 334444455555566
Q ss_pred HHHHhcCCcHHHHHHHHhhC
Q psy2691 78 LTAATHGLSEEAAELESNLR 97 (181)
Q Consensus 78 l~Akt~g~~e~a~~i~~~~~ 97 (181)
.++.-.|.-+.|.++...++
T Consensus 744 ~~~~~~g~~~~a~~~~~~~~ 763 (814)
T 3mkq_A 744 NAYWIAGDIQGAKDLLIKSQ 763 (814)
T ss_dssp HHHHHHTCHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHHcC
Confidence 55555555555555555444
No 4
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=83.52 E-value=1.8 Score=38.55 Aligned_cols=41 Identities=12% Similarity=0.017 Sum_probs=37.2
Q ss_pred hHHHHHHHhhCCHHHHHHHHHHcCCchHHHHHHHhcCCcHH
Q psy2691 48 SGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGLSEE 88 (181)
Q Consensus 48 ~~~f~~~l~lgdv~~rv~vL~~~g~~plAyl~Akt~g~~e~ 88 (181)
...+..+|+.||.++-|++..+.+|+..|.++|.+.|.+-+
T Consensus 147 d~~I~~aLl~Gd~e~AV~~cl~~~r~adAllLA~~gg~el~ 187 (399)
T 2pm7_A 147 EQTISKNLVSGNIKSAVKNSLENDLMMEAMVIALDSNNERL 187 (399)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHTTCCCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHHHhcCHHHH
Confidence 45588899999999999999999999999999999887655
No 5
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=68.84 E-value=16 Score=36.37 Aligned_cols=77 Identities=18% Similarity=0.167 Sum_probs=54.3
Q ss_pred cHHHHHHHHHH------hcCchhHHHHHHhhC-----C----HHHHHHHHHHHHHhc--hhhHHHHHHHhhCCHHHHHHH
Q psy2691 4 NHQIVEMCYQR------TKNFDKLAFLYLITG-----N----LEKLKKMMKIAEIRR--DISGQYQAALLLGEVGERIKI 66 (181)
Q Consensus 4 n~~laE~~yq~------~kdfd~LsfLYl~tG-----n----~ekL~km~~iAe~rg--d~~~~f~~~l~lgdv~~rv~v 66 (181)
++.+++.+..+ +.++.++..--+.+- + .+=|+-+.+|=.... |+..+.+|+++|||.+...++
T Consensus 173 rLD~Le~~vd~~~~~~~~~n~~rvclYlls~v~~lv~p~~fr~~vLr~l~~Iy~k~~~~dy~~a~~~ai~LnD~~li~~i 252 (963)
T 4ady_A 173 RLDIIESALKSKLDQDSTSENVKIINYLLTLAITTVTNSKFRSSILRKSFDFLMNMPNCDYLTLNKVVVNLNDAGLALQL 252 (963)
T ss_dssp CHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHHhhccccccccHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHcCCHHHHHHH
Confidence 45667777766 478888653222221 2 466777777777777 999999999999999999999
Q ss_pred HHH---cCCchHHHHHH
Q psy2691 67 LKS---CGQTSLAYLTA 80 (181)
Q Consensus 67 L~~---~g~~plAyl~A 80 (181)
|.+ ++....||-+|
T Consensus 253 f~~l~~~~d~l~ayQiA 269 (963)
T 4ady_A 253 FKKLKEENDEGLSAQIA 269 (963)
T ss_dssp HHHHHTTCCHHHHHHHH
T ss_pred HHHHHhcccHHHHHHHH
Confidence 998 56554444433
No 6
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=68.20 E-value=22 Score=37.30 Aligned_cols=81 Identities=15% Similarity=0.063 Sum_probs=45.0
Q ss_pred CccHHHHHHHHHHhcCchh------------------------------------HHHHHHhhCCHHHHH----------
Q psy2691 2 QGNHQIVEMCYQRTKNFDK------------------------------------LAFLYLITGNLEKLK---------- 35 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd~------------------------------------LsfLYl~tGn~ekL~---------- 35 (181)
+|+++-|..||.|++|.+. |.|.|..+|..+.+.
T Consensus 1118 ~G~~kEAIdsYiKAdD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad 1197 (1630)
T 1xi4_A 1118 KGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAH 1197 (1630)
T ss_pred CCCHHHHHHHHHhcCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHH
Confidence 5777777777777776665 456665555444433
Q ss_pred --HHHHHHHHhchhhHHHHHHHhhCCHHHHHHHHHHcCCchHHHHHHHh
Q psy2691 36 --KMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAAT 82 (181)
Q Consensus 36 --km~~iAe~rgd~~~~f~~~l~lgdv~~rv~vL~~~g~~plAyl~Akt 82 (181)
+++...+..|++-.|-.++--.++--.-..+|.+.|++..|.-+++.
T Consensus 1198 ~~~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaarK 1246 (1630)
T 1xi4_A 1198 IQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARK 1246 (1630)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 33334444555544444444445555555555555555555555543
No 7
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=62.61 E-value=56 Score=25.86 Aligned_cols=92 Identities=13% Similarity=0.105 Sum_probs=49.7
Q ss_pred ccHHHHHHHHHHhc---CchhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHHHHHHhhCCHHH---HHHHHHHcCCchHH
Q psy2691 3 GNHQIVEMCYQRTK---NFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGE---RIKILKSCGQTSLA 76 (181)
Q Consensus 3 Gn~~laE~~yq~~k---dfd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f~~~l~lgdv~~---rv~vL~~~g~~plA 76 (181)
||+++|-..-.... ...+|.=..+..||.+--.+- -.+-||+...+--+..+||.++ +.++=...|.+..|
T Consensus 19 g~l~~A~e~a~~l~~~~~Wk~Lg~~AL~~gn~~lAe~c---y~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~a 95 (177)
T 3mkq_B 19 GNLDAALDEAKKLNDSITWERLIQEALAQGNASLAEMI---YQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSM 95 (177)
T ss_dssp TCHHHHHHHHHHHCCHHHHHHHHHHHHHTTCHHHHHHH---HHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHHHHHHcCChHHHHHH---HHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHH
Confidence 66666655443322 233444444444443322111 1233444444444555565543 34455567889999
Q ss_pred HHHHHhcCCcHHHHHHHHhhC
Q psy2691 77 YLTAATHGLSEEAAELESNLR 97 (181)
Q Consensus 77 yl~Akt~g~~e~a~~i~~~~~ 97 (181)
...+--.|.-+.+-+++.+.+
T Consensus 96 f~~~l~lGdv~~~i~lL~~~~ 116 (177)
T 3mkq_B 96 LLNTFYNNSTKERSSIFAEGG 116 (177)
T ss_dssp HHHHHHHTCHHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHHCC
Confidence 999888887766666666555
No 8
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=61.50 E-value=11 Score=33.93 Aligned_cols=41 Identities=20% Similarity=0.157 Sum_probs=36.9
Q ss_pred HHHHHHHhhCCHHHHHHHHHHcCCchHHHHHHHhcCCcHHH
Q psy2691 49 GQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGLSEEA 89 (181)
Q Consensus 49 ~~f~~~l~lgdv~~rv~vL~~~g~~plAyl~Akt~g~~e~a 89 (181)
.+|+.+|+.|+.++-++.-.+.+++..|-+.|.+-|.+-..
T Consensus 155 ~~I~~~Ll~G~~e~Av~~al~~~lwa~ALlLAs~~g~e~~~ 195 (441)
T 3mzk_B 155 MRVLAFLQTGNHDEALRLALSKRDYAIALLVGSLMGKDRWS 195 (441)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHhCCcHHHHHHHHHhcCHHHHH
Confidence 47999999999999999999999999999999888875433
No 9
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=60.70 E-value=20 Score=37.55 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=32.1
Q ss_pred CccHHHHHHHHHHhcCchhHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKI 40 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd~LsfLYl~tGn~ekL~km~~i 40 (181)
+|+++-|..+|+++++|.+|...|.-.|+.++=-..++.
T Consensus 1208 eg~YeeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaarK 1246 (1630)
T 1xi4_A 1208 EKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARK 1246 (1630)
T ss_pred cCCHHHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 689999999999999999999999999885554444433
No 10
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=58.83 E-value=45 Score=23.52 Aligned_cols=68 Identities=9% Similarity=0.149 Sum_probs=33.9
Q ss_pred CccHHHHHHHHHHhcC--------------chhHHHHHHhhCCHHH----HHHHHHHHHHhchhh--------HHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------------FDKLAFLYLITGNLEK----LKKMMKIAEIRRDIS--------GQYQAAL 55 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------------fd~LsfLYl~tGn~ek----L~km~~iAe~rgd~~--------~~f~~~l 55 (181)
+|++.-|..+|+++-. +-.|..+|...|+.++ +.+..++++..++.. ..=.+.+
T Consensus 39 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 39 MDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL 118 (203)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 4555555555555433 3345566777777665 344444444444211 1112234
Q ss_pred hhCCHHHHHHHHHH
Q psy2691 56 LLGEVGERIKILKS 69 (181)
Q Consensus 56 ~lgdv~~rv~vL~~ 69 (181)
.+|+.++.+..+.+
T Consensus 119 ~~g~~~~A~~~~~~ 132 (203)
T 3gw4_A 119 HFGDLAGARQEYEK 132 (203)
T ss_dssp HHTCHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHH
Confidence 45666665555544
No 11
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=56.22 E-value=49 Score=24.90 Aligned_cols=96 Identities=17% Similarity=0.138 Sum_probs=64.3
Q ss_pred CccHHHHHHHHHHhcCch-----------------hHHHHHHhhCCHHHHHHHHHHH-----HHhchhhHHHHHHHhhCC
Q psy2691 2 QGNHQIVEMCYQRTKNFD-----------------KLAFLYLITGNLEKLKKMMKIA-----EIRRDISGQYQAALLLGE 59 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd-----------------~LsfLYl~tGn~ekL~km~~iA-----e~rgd~~~~f~~~l~lgd 59 (181)
.|+.++++...++..+.. ..+.+....|+.+-++.|.+.. .........++.+...|+
T Consensus 115 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 194 (285)
T 1wdy_A 115 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSD 194 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSC
T ss_pred hCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccc
Confidence 578888888888754433 5677778889998888886431 011223456777777777
Q ss_pred H---HHHHHHHHHcC----------CchHHHHHHHhcCCcHHHHHHHHhhCCC
Q psy2691 60 V---GERIKILKSCG----------QTSLAYLTAATHGLSEEAAELESNLRTA 99 (181)
Q Consensus 60 v---~~rv~vL~~~g----------~~plAyl~Akt~g~~e~a~~i~~~~~~~ 99 (181)
. .+.+++|.+.| +.| ...|..+|-.++...|++..|.+
T Consensus 195 ~~~~~~i~~~Ll~~g~~~~~~~~~g~t~--L~~A~~~~~~~~v~~Ll~~~g~~ 245 (285)
T 1wdy_A 195 DSDVEAITHLLLDHGADVNVRGERGKTP--LILAVEKKHLGLVQRLLEQEHIE 245 (285)
T ss_dssp TTTHHHHHHHHHHTTCCSSCCCTTSCCH--HHHHHHTTCHHHHHHHHHSSSCC
T ss_pred cchHHHHHHHHHHcCCCCCCcCCCCCcH--HHHHHHcCCHHHHHHHHhccCCC
Confidence 4 67888888764 334 44566678888888888866643
No 12
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=56.17 E-value=35 Score=30.82 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=29.0
Q ss_pred CccHHHHHHHHHHhcCchhHHHHHHhhCCHHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIA 41 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd~LsfLYl~tGn~ekL~km~~iA 41 (181)
+|+++=|..+|++..+|.+|.-.|...|+.+.=......|
T Consensus 135 ~g~yeeA~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 135 EKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp --CTTTHHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 5777888888999999999888888888877744443333
No 13
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=55.91 E-value=57 Score=23.87 Aligned_cols=93 Identities=16% Similarity=0.072 Sum_probs=62.4
Q ss_pred CccHHHHHHHHHHhcCch-------hHHHHHHhhCCHHHHHHHHHHHHH----h-chhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFD-------KLAFLYLITGNLEKLKKMMKIAEI----R-RDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd-------~LsfLYl~tGn~ekL~km~~iAe~----r-gd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
.|++++++...++.-++. ..+.+....|+.+-++.|.+.-.. . ......++.+...|+.+ +++.|.+
T Consensus 19 ~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~-~v~~Ll~ 97 (240)
T 3eu9_A 19 YGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLS-MVVQLMK 97 (240)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHH-HHHHHHH
T ss_pred cCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHH-HHHHHHH
Confidence 588999999888765553 267777888999988888653211 1 11345788888888865 6777776
Q ss_pred cCCch--------HHHHHHHhcCCcHHHHHHHHh
Q psy2691 70 CGQTS--------LAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 70 ~g~~p--------lAyl~Akt~g~~e~a~~i~~~ 95 (181)
.|--+ -+...|..+|-.++...+++.
T Consensus 98 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 131 (240)
T 3eu9_A 98 YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK 131 (240)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc
Confidence 54221 234456667888888887764
No 14
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=55.67 E-value=29 Score=26.43 Aligned_cols=94 Identities=12% Similarity=0.003 Sum_probs=58.9
Q ss_pred CccHHHHHHHHHHhcCc--------------------hhHHHHHHhhCCHHHHHHHHHH-------HHHhchhhHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNF--------------------DKLAFLYLITGNLEKLKKMMKI-------AEIRRDISGQYQAA 54 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf--------------------d~LsfLYl~tGn~ekL~km~~i-------Ae~rgd~~~~f~~~ 54 (181)
.|+.++|+.-.++.-+. ...+.+....|+.+-++.|.+. ...-.+-...+|.+
T Consensus 100 ~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A 179 (256)
T 2etb_A 100 KRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHAL 179 (256)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHH
Confidence 57888888887764432 2455666778888888888661 11112234556666
Q ss_pred Hh--hCCHH------HHHHHHHHcCCch---------------HHHHHHHhcCCcHHHHHHHHh
Q psy2691 55 LL--LGEVG------ERIKILKSCGQTS---------------LAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 55 l~--lgdv~------~rv~vL~~~g~~p---------------lAyl~Akt~g~~e~a~~i~~~ 95 (181)
.. .|..+ +.+++|.+.|--+ -+...|..+|-.+++..|++.
T Consensus 180 ~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 243 (256)
T 2etb_A 180 VMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQR 243 (256)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhC
Confidence 66 56665 4888887753211 144556677878888877765
No 15
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=53.50 E-value=56 Score=23.00 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=58.5
Q ss_pred CccHHHHHHHHHHhcCch-------hHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKNFD-------KLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd-------~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
+|++++++...++..++. ..+.+....|+.+-++.|.+.-. ........+|.+...|+++ ++++|.+.
T Consensus 13 ~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~ 91 (167)
T 3v31_A 13 QGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTD-IVKMLLDC 91 (167)
T ss_dssp TTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHHC
Confidence 688888888887654432 35666677888888887754310 0112235788888888864 67777764
Q ss_pred ----------CCchHHHHHHHhcCCcHHHHHHHH
Q psy2691 71 ----------GQTSLAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 71 ----------g~~plAyl~Akt~g~~e~a~~i~~ 94 (181)
|+.|+ ..|..+|-.++...+++
T Consensus 92 g~~~~~~~~~g~t~L--~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 92 GVDVNEYDWNGGTPL--LYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp TCCTTCCCTTSCCHH--HHHHHTTCHHHHHHHHH
T ss_pred CCCCCcCCCCCCCHH--HHHHHcCCHHHHHHHHH
Confidence 34444 44556777788777776
No 16
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=53.31 E-value=52 Score=22.58 Aligned_cols=17 Identities=12% Similarity=0.188 Sum_probs=8.1
Q ss_pred HHHHHhhCCHHHHHHHH
Q psy2691 22 AFLYLITGNLEKLKKMM 38 (181)
Q Consensus 22 sfLYl~tGn~ekL~km~ 38 (181)
+++....|+.+-++.|.
T Consensus 18 l~~A~~~g~~~~v~~Ll 34 (136)
T 2jab_A 18 LLEAARAGQDDEVRILM 34 (136)
T ss_dssp HHHHHHHTCHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHH
Confidence 34444455555555443
No 17
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=53.08 E-value=44 Score=22.16 Aligned_cols=47 Identities=11% Similarity=0.020 Sum_probs=30.3
Q ss_pred CccHHHHHHHHHHhcCc-----------hhHHHHHHhhCCHHHHHHHHHHHHHhchhh
Q psy2691 2 QGNHQIVEMCYQRTKNF-----------DKLAFLYLITGNLEKLKKMMKIAEIRRDIS 48 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-----------d~LsfLYl~tGn~ekL~km~~iAe~rgd~~ 48 (181)
+|+++-|..+|+++=.. -.|..+|...|+.++=.+..+.|-...-.+
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 60 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH 60 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 57777777888777655 357778888899888777776666554433
No 18
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=52.41 E-value=44 Score=21.53 Aligned_cols=44 Identities=11% Similarity=-0.049 Sum_probs=28.1
Q ss_pred CccHHHHHHHHHHhcCc--------hhHHHHHHhhCCHHHHHHHHHHHHHhc
Q psy2691 2 QGNHQIVEMCYQRTKNF--------DKLAFLYLITGNLEKLKKMMKIAEIRR 45 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf--------d~LsfLYl~tGn~ekL~km~~iAe~rg 45 (181)
+|+++-|..+|+++-.. -.|..+|...|+.++-.+..+.|....
T Consensus 29 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 80 (133)
T 2lni_A 29 KGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLE 80 (133)
T ss_dssp TTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 56777777777775432 345666777788777666665555443
No 19
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=52.05 E-value=47 Score=21.72 Aligned_cols=12 Identities=17% Similarity=0.492 Sum_probs=6.0
Q ss_pred ccHHHHHHHHHH
Q psy2691 3 GNHQIVEMCYQR 14 (181)
Q Consensus 3 Gn~~laE~~yq~ 14 (181)
|+.++++...++
T Consensus 13 ~~~~~v~~Ll~~ 24 (126)
T 1n0r_A 13 GHLEVVKLLLEA 24 (126)
T ss_dssp TCHHHHHHHHHH
T ss_pred CcHHHHHHHHHc
Confidence 445555555444
No 20
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=50.63 E-value=23 Score=27.04 Aligned_cols=65 Identities=18% Similarity=0.136 Sum_probs=45.9
Q ss_pred hCCHHHHHHHHHHHHHhc---------------hhhHHHHHHHhhCCHHHHHHHHHHc----------------------
Q psy2691 28 TGNLEKLKKMMKIAEIRR---------------DISGQYQAALLLGEVGERIKILKSC---------------------- 70 (181)
Q Consensus 28 tGn~ekL~km~~iAe~rg---------------d~~~~f~~~l~lgdv~~rv~vL~~~---------------------- 70 (181)
.|+.+-++.|.+.....+ .....+|.+...|+++ +|++|.+.
T Consensus 59 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~-~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 137 (260)
T 3jxi_A 59 AGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKH-YVELLVEKGADVHAQARGRFFQPKDEGGYF 137 (260)
T ss_dssp TTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHH-HHHHHHHTTCCTTCCCEECCCSSSCCCCSC
T ss_pred cCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHH-HHHHHHhCCCCcCccccccccCcccccccc
Confidence 399999998887765422 3345788888889875 78888775
Q ss_pred --CCchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 71 --GQTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 71 --g~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
|+.|| ..|..+|-.+++..+++.
T Consensus 138 ~~g~tpL--~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 138 YFGELPL--SLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp CSCSSHH--HHHHHTTCHHHHHHHHHC
T ss_pred cCCCCHH--HHHHHcCCHHHHHHHHhc
Confidence 44444 455667878888888774
No 21
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=50.44 E-value=47 Score=22.16 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=34.8
Q ss_pred HHHhcCchhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHcC
Q psy2691 12 YQRTKNFDKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSCG 71 (181)
Q Consensus 12 yq~~kdfd~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~g 71 (181)
.+...+....++.....|+.+-++.|.+.-. .-..-+..+|.+...|+++ ++++|.+.|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~-~v~~Ll~~g 80 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLE-VVKLLLEAG 80 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHHTT
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH-HHHHHHHcC
Confidence 3445667777888888888888887754210 0112245677777777664 566666654
No 22
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=49.05 E-value=83 Score=25.23 Aligned_cols=68 Identities=10% Similarity=0.009 Sum_probs=39.1
Q ss_pred CccHHHHHHHHHHhc--------------CchhHHHHHHhhCCHHHHH----HHHHHHHHhch-hh------HHHHHHHh
Q psy2691 2 QGNHQIVEMCYQRTK--------------NFDKLAFLYLITGNLEKLK----KMMKIAEIRRD-IS------GQYQAALL 56 (181)
Q Consensus 2 qGn~~laE~~yq~~k--------------dfd~LsfLYl~tGn~ekL~----km~~iAe~rgd-~~------~~f~~~l~ 56 (181)
+|+++-|..+|+++- -+..|..+|...|+.++=. +..++++..++ .. ..=.+.+.
T Consensus 197 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (383)
T 3ulq_A 197 LKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYK 276 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Confidence 467777777777654 3456778888888876644 44444444454 21 11223344
Q ss_pred hCCHHHHHHHHHH
Q psy2691 57 LGEVGERIKILKS 69 (181)
Q Consensus 57 lgdv~~rv~vL~~ 69 (181)
+|+.++.+..+.+
T Consensus 277 ~g~~~~A~~~~~~ 289 (383)
T 3ulq_A 277 LGKIDKAHEYHSK 289 (383)
T ss_dssp TTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5666666555554
No 23
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=48.58 E-value=77 Score=23.16 Aligned_cols=69 Identities=7% Similarity=-0.073 Sum_probs=36.0
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH------------HHHHhhCCHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY------------QAALLLGEVG 61 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f------------~~~l~lgdv~ 61 (181)
+|+++-|..+|+++-. +-.|..+|...|+.++=.+..+.|......+..+ .+.+-+|+.+
T Consensus 55 ~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 134 (228)
T 4i17_A 55 IKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIE 134 (228)
T ss_dssp TTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHH
Confidence 3555666666655432 2345566666676666555555554443333211 2233456666
Q ss_pred HHHHHHHHc
Q psy2691 62 ERIKILKSC 70 (181)
Q Consensus 62 ~rv~vL~~~ 70 (181)
+.++.+.++
T Consensus 135 ~A~~~~~~a 143 (228)
T 4i17_A 135 KAEENYKHA 143 (228)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666554
No 24
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.45 E-value=56 Score=21.55 Aligned_cols=43 Identities=14% Similarity=0.031 Sum_probs=27.0
Q ss_pred CccHHHHHHHHHHhcCc-----------hhHHHHHHhhCCHHHHHHHHHHHHHh
Q psy2691 2 QGNHQIVEMCYQRTKNF-----------DKLAFLYLITGNLEKLKKMMKIAEIR 44 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-----------d~LsfLYl~tGn~ekL~km~~iAe~r 44 (181)
+|+++-|..+|+++-.. -.|..+|...|+.++-.+..+.+...
T Consensus 41 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 41 CGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp TTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 57788888888876433 23455667777777665555554443
No 25
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=48.24 E-value=81 Score=23.33 Aligned_cols=91 Identities=18% Similarity=0.132 Sum_probs=60.7
Q ss_pred CccHHHHHHHHHH-h-----cCc--hhHHHHHHhhCCHHHHHHHHHHHHHh---------chhhHHHHHHHhhCCHHHHH
Q psy2691 2 QGNHQIVEMCYQR-T-----KNF--DKLAFLYLITGNLEKLKKMMKIAEIR---------RDISGQYQAALLLGEVGERI 64 (181)
Q Consensus 2 qGn~~laE~~yq~-~-----kdf--d~LsfLYl~tGn~ekL~km~~iAe~r---------gd~~~~f~~~l~lgdv~~rv 64 (181)
.|++++++...++ . ++. ...+.+....|+.+-++.|.+.-..- .+-...++.+...|+++ ++
T Consensus 13 ~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v 91 (232)
T 2rfa_A 13 ENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVN-LV 91 (232)
T ss_dssp TTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHH-HH
T ss_pred cCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHH-HH
Confidence 5888888888876 2 122 23566667789998888886642111 13346788888889875 77
Q ss_pred HHHHHc-----------------------CCchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 65 KILKSC-----------------------GQTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 65 ~vL~~~-----------------------g~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
++|.+. |+.|+ ..|..+|-.++...+++.
T Consensus 92 ~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L--~~A~~~~~~~~v~~Ll~~ 143 (232)
T 2rfa_A 92 RALLARGASVSARATGSVFHYRPHNLIYYGEHPL--SFAACVGSEEIVRLLIEH 143 (232)
T ss_dssp HHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHH--HHHHHHTCHHHHHHHHHT
T ss_pred HHHHhCCCCCCcccCCcceeecccccccCCCCHH--HHHHHcCCHHHHHHHHHC
Confidence 888765 44444 445567777888877764
No 26
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=47.26 E-value=41 Score=25.94 Aligned_cols=91 Identities=16% Similarity=0.077 Sum_probs=58.1
Q ss_pred CccHHHHHHHHHH-------------hcCchhHHHHHHhh-----CCHHHHHHHHHHHHHh---------------chhh
Q psy2691 2 QGNHQIVEMCYQR-------------TKNFDKLAFLYLIT-----GNLEKLKKMMKIAEIR---------------RDIS 48 (181)
Q Consensus 2 qGn~~laE~~yq~-------------~kdfd~LsfLYl~t-----Gn~ekL~km~~iAe~r---------------gd~~ 48 (181)
+|++++|+...+. .++..+-.-|+... |+.+-++.|.+..... ..-.
T Consensus 23 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~ 102 (273)
T 2pnn_A 23 QSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQ 102 (273)
T ss_dssp TTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTC
T ss_pred cCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCC
Confidence 4667766665553 12334444444444 8888888887764321 1345
Q ss_pred HHHHHHHhhCCHHHHHHHHHHc------------------------CCchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 49 GQYQAALLLGEVGERIKILKSC------------------------GQTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 49 ~~f~~~l~lgdv~~rv~vL~~~------------------------g~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
..+|.+...|+++ .|++|.+. |+.|| ..|..+|-.++...|++.
T Consensus 103 tpL~~A~~~g~~~-~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL--~~A~~~g~~~~v~~Ll~~ 170 (273)
T 2pnn_A 103 TALHIAIERRNMT-LVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPL--SLAACTNQLAIVKFLLQN 170 (273)
T ss_dssp CHHHHHHHTTCHH-HHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHH--HHHHHTTCHHHHHHHHHC
T ss_pred CHHHHHHHcCCHH-HHHHHHHCCCCcCccccccccccccccccccCCCCHH--HHHHHcCCHHHHHHHHhc
Confidence 6788888888874 67777765 44454 455667878888888774
No 27
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=45.75 E-value=94 Score=23.39 Aligned_cols=19 Identities=21% Similarity=0.064 Sum_probs=8.2
Q ss_pred hCCHHHHHHHHHHHHHhch
Q psy2691 28 TGNLEKLKKMMKIAEIRRD 46 (181)
Q Consensus 28 tGn~ekL~km~~iAe~rgd 46 (181)
.|+.++-.+..+.|...++
T Consensus 163 ~~~~~~A~~~~~~a~~~~~ 181 (273)
T 1ouv_A 163 PKDLKKALASYDKACDLKD 181 (273)
T ss_dssp CCCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHCCC
Confidence 4444444444444444333
No 28
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=45.17 E-value=96 Score=23.33 Aligned_cols=68 Identities=13% Similarity=0.064 Sum_probs=36.6
Q ss_pred CccHHHHHHHHHHhcC------chhHHHHHHh----hCCHHHHHHHHHHHHHhchhhHHHHHHH-h------hCCHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN------FDKLAFLYLI----TGNLEKLKKMMKIAEIRRDISGQYQAAL-L------LGEVGERI 64 (181)
Q Consensus 2 qGn~~laE~~yq~~kd------fd~LsfLYl~----tGn~ekL~km~~iAe~rgd~~~~f~~~l-~------lgdv~~rv 64 (181)
+|+++-|..+|+++-. +-.|..+|.. .|+.++=.+..+.|-..++....+..+. | .++.++.+
T Consensus 91 ~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~ 170 (273)
T 1ouv_A 91 SQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKAL 170 (273)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 4556666666665532 2235555665 6666666666666655555444333321 1 55666666
Q ss_pred HHHHH
Q psy2691 65 KILKS 69 (181)
Q Consensus 65 ~vL~~ 69 (181)
..+.+
T Consensus 171 ~~~~~ 175 (273)
T 1ouv_A 171 ASYDK 175 (273)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 29
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=44.75 E-value=86 Score=25.13 Aligned_cols=73 Identities=12% Similarity=0.058 Sum_probs=48.4
Q ss_pred CccHHHHHHHHHHh-------cC-------chhHHHHHHhhCCHHHHHHH----HHHHHHhchhhHH------HHHHHhh
Q psy2691 2 QGNHQIVEMCYQRT-------KN-------FDKLAFLYLITGNLEKLKKM----MKIAEIRRDISGQ------YQAALLL 57 (181)
Q Consensus 2 qGn~~laE~~yq~~-------kd-------fd~LsfLYl~tGn~ekL~km----~~iAe~rgd~~~~------f~~~l~l 57 (181)
+|+++-|..+|+++ ++ +-.|..+|...|+.++=.+. .+++...++.... -....-.
T Consensus 237 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~ 316 (383)
T 3ulq_A 237 QSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSG 316 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSS
T ss_pred CCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCC
Confidence 67888888877776 44 89999999999998765444 4444444443221 1123334
Q ss_pred CC---HHHHHHHHHHcCCch
Q psy2691 58 GE---VGERIKILKSCGQTS 74 (181)
Q Consensus 58 gd---v~~rv~vL~~~g~~p 74 (181)
|+ .++.+.++.+.+..+
T Consensus 317 ~~~~~~~~al~~~~~~~~~~ 336 (383)
T 3ulq_A 317 PDEEAIQGFFDFLESKMLYA 336 (383)
T ss_dssp CCHHHHHHHHHHHHHTTCHH
T ss_pred CcHHHHHHHHHHHHHCcCHH
Confidence 66 888888888887655
No 30
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=44.57 E-value=77 Score=22.06 Aligned_cols=68 Identities=12% Similarity=0.079 Sum_probs=43.4
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----HHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----QAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++-. +-.|..+|...|+.++=.+..+.|-.....+... .+.+.+|+.++.++.|.
T Consensus 24 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 24 RKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 5788888888887643 3457778888899887776666665544433222 22345566666666555
Q ss_pred H
Q psy2691 69 S 69 (181)
Q Consensus 69 ~ 69 (181)
+
T Consensus 104 ~ 104 (164)
T 3sz7_A 104 K 104 (164)
T ss_dssp H
T ss_pred H
Confidence 4
No 31
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=44.36 E-value=69 Score=25.80 Aligned_cols=93 Identities=13% Similarity=0.051 Sum_probs=0.0
Q ss_pred Cc--cHHHHHHHHHHhcCch-------hHHHHHHhhCCHHHHHHHHH---------HHHHhchhhHHHHHHHhhCCHHHH
Q psy2691 2 QG--NHQIVEMCYQRTKNFD-------KLAFLYLITGNLEKLKKMMK---------IAEIRRDISGQYQAALLLGEVGER 63 (181)
Q Consensus 2 qG--n~~laE~~yq~~kdfd-------~LsfLYl~tGn~ekL~km~~---------iAe~rgd~~~~f~~~l~lgdv~~r 63 (181)
.| +.++|+.-.++.-+.. ..+.+....|+.+-++.|.+ +-.....-...+|.+...|..+ +
T Consensus 148 ~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~-~ 226 (364)
T 3ljn_A 148 LGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWED-V 226 (364)
T ss_dssp SCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHH-H
T ss_pred cCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHH-H
Q ss_pred HHHHHHcCCchH--------HHHHHHhcCCcHHHHHHHHh
Q psy2691 64 IKILKSCGQTSL--------AYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 64 v~vL~~~g~~pl--------Ayl~Akt~g~~e~a~~i~~~ 95 (181)
|++|.+.|--+- +...|..+|-.+++..|++.
T Consensus 227 v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 227 AMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
No 32
>3bg1_B Nucleoporin NUP145; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Saccharomyces cerevisiae} PDB: 3bg0_B 3iko_B
Probab=43.77 E-value=75 Score=28.47 Aligned_cols=49 Identities=18% Similarity=0.095 Sum_probs=39.6
Q ss_pred hchhhHHHHHHHhhCCHHHHHHHHHHcCCchHHHHHHHhcCCcHHHHHH
Q psy2691 44 RRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAEL 92 (181)
Q Consensus 44 rgd~~~~f~~~l~lgdv~~rv~vL~~~g~~plAyl~Akt~g~~e~a~~i 92 (181)
..++--+....|..|+|++-+++.+++|.+-||.+++..-+-+..-..+
T Consensus 177 ~~~~~e~i~~~L~~~~v~eA~~~Ai~~~d~rLA~Llsq~g~~~~~r~~l 225 (442)
T 3bg1_B 177 SSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLISYLGSNDPRIRDL 225 (442)
T ss_dssp CSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHHTSCCHHHHHH
T ss_pred CCCHHHHHHHHHHCCCHHHHHHHHHHCCCcHHHHHHHHhcCCchHHHHH
Confidence 3455556677788999999999999999999999999987776544444
No 33
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=43.64 E-value=57 Score=24.36 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=40.0
Q ss_pred ccHHHHHHHHHHh-----c---CchhHHHHHHhhCCHHHHHHHHHHHHHhch-hhHHH---HHHHhhCCHHHHHHHHHHc
Q psy2691 3 GNHQIVEMCYQRT-----K---NFDKLAFLYLITGNLEKLKKMMKIAEIRRD-ISGQY---QAALLLGEVGERIKILKSC 70 (181)
Q Consensus 3 Gn~~laE~~yq~~-----k---dfd~LsfLYl~tGn~ekL~km~~iAe~rgd-~~~~f---~~~l~lgdv~~rv~vL~~~ 70 (181)
|+++-|..+|+++ . -+-.|..+|...|+.++=.+..+.|-...+ ....+ .+.+.+|+.++.+..+.++
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 177 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQYAKA 177 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcccchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 6666677777653 1 234567788888888765555555443332 11112 2344668888877777654
No 34
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=43.64 E-value=65 Score=24.04 Aligned_cols=68 Identities=22% Similarity=0.248 Sum_probs=43.5
Q ss_pred ccHHHHHHHHHHhcC------chhHHHHHHhhC----CHHHHHHHHHHHHHhchhhHHHHHHH-h------hCCHHHHHH
Q psy2691 3 GNHQIVEMCYQRTKN------FDKLAFLYLITG----NLEKLKKMMKIAEIRRDISGQYQAAL-L------LGEVGERIK 65 (181)
Q Consensus 3 Gn~~laE~~yq~~kd------fd~LsfLYl~tG----n~ekL~km~~iAe~rgd~~~~f~~~l-~------lgdv~~rv~ 65 (181)
||++-|..+|+++-+ .-.|..+|.. | |.++=.+..+.|-..|+....+.... | .+|.++-++
T Consensus 32 ~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~ 110 (212)
T 3rjv_A 32 GDYQKAEYWAQKAAAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAIT 110 (212)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHH
Confidence 566667777776532 2345666666 5 77776777777777777776666543 3 457777777
Q ss_pred HHHHcC
Q psy2691 66 ILKSCG 71 (181)
Q Consensus 66 vL~~~g 71 (181)
.|.++=
T Consensus 111 ~~~~A~ 116 (212)
T 3rjv_A 111 LLQDAA 116 (212)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 777653
No 35
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=43.49 E-value=77 Score=23.46 Aligned_cols=90 Identities=22% Similarity=0.144 Sum_probs=56.1
Q ss_pred CccHHHHHHHHHHhcCch-------hHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKNFD-------KLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd-------~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.|+.++++...++.-+.. ..+.+....|+.+-++.|.+.-. ........++.+...|+.+ .++.|.+.
T Consensus 21 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~ 99 (237)
T 3b7b_A 21 AGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYE-VVQYLLSN 99 (237)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHH-HHHHHHTT
T ss_pred cCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHhC
Confidence 478888888887754433 35666777888888877754210 1112245677777777754 66777665
Q ss_pred C-----------CchHHHHHHHhcCCcHHHHHHHH
Q psy2691 71 G-----------QTSLAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 71 g-----------~~plAyl~Akt~g~~e~a~~i~~ 94 (181)
| +.|+ ..|..+|-.++...+++
T Consensus 100 ~~~~~~~~~~~g~t~L--~~A~~~~~~~~~~~Ll~ 132 (237)
T 3b7b_A 100 GQMDVNCQDDGGWTPM--IWATEYKHVDLVKLLLS 132 (237)
T ss_dssp TCCCTTCCCTTSCCHH--HHHHHTTCHHHHHHHHH
T ss_pred CCCCcccCCCCCCCHH--HHHHHcCCHHHHHHHHH
Confidence 5 3344 44556677777777765
No 36
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=43.11 E-value=58 Score=20.23 Aligned_cols=40 Identities=18% Similarity=0.197 Sum_probs=19.8
Q ss_pred CccHHHHHHHHHHhcCc--------hhHHHHHHhhCCHHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNF--------DKLAFLYLITGNLEKLKKMMKIA 41 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf--------d~LsfLYl~tGn~ekL~km~~iA 41 (181)
+|+++-|..+|+++-.. -.+..+|...|+.++-.+..+.+
T Consensus 17 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 64 (118)
T 1elw_A 17 VGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKT 64 (118)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 45666666666654322 22344455555555544444433
No 37
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=42.96 E-value=81 Score=21.83 Aligned_cols=91 Identities=18% Similarity=0.106 Sum_probs=50.2
Q ss_pred CccHHHHHHHHHHhcCc-----hhH-HHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHcC
Q psy2691 2 QGNHQIVEMCYQRTKNF-----DKL-AFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSCG 71 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-----d~L-sfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~g 71 (181)
.|+.++++...++.-+. .+- .|.+.+.|+.+-++.|.+.-. ........+|.+...|+++ .+++|.+.|
T Consensus 15 ~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g 93 (162)
T 1ihb_A 15 RGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLD-TLQTLLEFQ 93 (162)
T ss_dssp HTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCSSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT
T ss_pred cCCHHHHHHHHhCCCCccccCccCccHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHcC
Confidence 46777777776643222 222 233344477777777654210 0112235677777777764 566666643
Q ss_pred ----------CchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 72 ----------QTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 72 ----------~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
+.|+ ..|..+|-.++...+++.
T Consensus 94 ~~~~~~~~~g~t~L--~~A~~~~~~~~v~~Ll~~ 125 (162)
T 1ihb_A 94 ADVNIEDNEGNLPL--HLAAKEGHLRVVEFLVKH 125 (162)
T ss_dssp CCTTCCCTTSCCHH--HHHHHTTCHHHHHHHHHH
T ss_pred CCCCCcCCCCCCHH--HHHHHcCCHHHHHHHHHc
Confidence 3344 344556777777777654
No 38
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=42.68 E-value=39 Score=26.39 Aligned_cols=40 Identities=10% Similarity=-0.074 Sum_probs=25.2
Q ss_pred CccHHHHHHHHHHhc---------------CchhHHHHHHhhCCHHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTK---------------NFDKLAFLYLITGNLEKLKKMMKIA 41 (181)
Q Consensus 2 qGn~~laE~~yq~~k---------------dfd~LsfLYl~tGn~ekL~km~~iA 41 (181)
+|+++-|..+|+++- -+-.+..+|...|+.++=-+..+.|
T Consensus 168 ~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~ka 222 (293)
T 2qfc_A 168 NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKA 222 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 577888888887753 1234566777788876654444433
No 39
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=41.70 E-value=73 Score=23.36 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=36.8
Q ss_pred HHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHcCCc---------hHHHHHHHhcCCcHH
Q psy2691 22 AFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSCGQT---------SLAYLTAATHGLSEE 88 (181)
Q Consensus 22 sfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~g~~---------plAyl~Akt~g~~e~ 88 (181)
+.+....|+.+-++.|.+.-. ........+|.+...|++ +.+++|.+.|.. .-+...|..+|-.++
T Consensus 111 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~ 189 (228)
T 2dzn_A 111 LHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL-KLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDA 189 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH-HHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHH
Confidence 344445566655555543200 001122356666666655 456666655510 013344455666666
Q ss_pred HHHHHHhhCCC
Q psy2691 89 AAELESNLRTA 99 (181)
Q Consensus 89 a~~i~~~~~~~ 99 (181)
+..++++.|.+
T Consensus 190 v~~Ll~~~ga~ 200 (228)
T 2dzn_A 190 AVLLVEKYGAE 200 (228)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHhcCCC
Confidence 66666555543
No 40
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=41.52 E-value=92 Score=22.06 Aligned_cols=91 Identities=22% Similarity=0.237 Sum_probs=60.9
Q ss_pred CccHHHHHHHHHHhcCc-------hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKNF-------DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-------d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.|++++++...++.-+. ...+.+....|+.+-++.|.+.-. ........+|.+...|+.+ .+++|.+.
T Consensus 24 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~ 102 (169)
T 2y1l_E 24 AGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLE-IVEVLLKN 102 (169)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH-HHHHHHHc
Confidence 58899999888865433 245666777899988888865310 0112345788888888865 77888775
Q ss_pred C----------CchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 71 G----------QTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 71 g----------~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
| +.|+ ..|..+|-.++...+++.
T Consensus 103 g~~~~~~~~~g~t~L--~~A~~~~~~~~v~~Ll~~ 135 (169)
T 2y1l_E 103 GADVNANDMEGHTPL--HLAAMFGHLEIVEVLLKN 135 (169)
T ss_dssp TCCTTCCCTTSCCHH--HHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCHH--HHHHHcCCHHHHHHHHHc
Confidence 4 3444 445567777888777764
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=41.08 E-value=1.1e+02 Score=22.65 Aligned_cols=95 Identities=12% Similarity=0.026 Sum_probs=62.0
Q ss_pred CccHHHHHHHHHHhcCc--------------------hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhh
Q psy2691 2 QGNHQIVEMCYQRTKNF--------------------DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLL 57 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf--------------------d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~l 57 (181)
.|+.++++.-.++.-+. ...+.+....|+.+-++.|.+--. .-.+-+..+|.+...
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~ 164 (232)
T 2rfa_A 85 NQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQ 164 (232)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTC
T ss_pred cCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 47788888877765443 235666677889888888864310 112234678999999
Q ss_pred CCHHH---HHHHHHHcCCch--------------HHHHHHHhcCCcHHHHHHHHhh
Q psy2691 58 GEVGE---RIKILKSCGQTS--------------LAYLTAATHGLSEEAAELESNL 96 (181)
Q Consensus 58 gdv~~---rv~vL~~~g~~p--------------lAyl~Akt~g~~e~a~~i~~~~ 96 (181)
|+.+- .+++|.+.|.-+ -+.-.|..+|-.+++..|++.-
T Consensus 165 ~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 165 PNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp SCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 98863 358887765422 2455666778888888887753
No 42
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=40.61 E-value=89 Score=21.65 Aligned_cols=91 Identities=16% Similarity=0.145 Sum_probs=48.4
Q ss_pred CccHHHHHHHHHHhcCch------hHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHcC
Q psy2691 2 QGNHQIVEMCYQRTKNFD------KLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSCG 71 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd------~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~g 71 (181)
.|++++++...++..++. ..+.+....|+.+-++.|.+.-. ........+|.+...|+.+ .+++|.+.|
T Consensus 12 ~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g 90 (153)
T 1awc_B 12 AGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN-IVEVLLKHG 90 (153)
T ss_dssp HTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHTTT
T ss_pred cCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH-HHHHHHHcC
Confidence 466777777766644332 34555566677776666653210 0111234566666666654 566666543
Q ss_pred ----------CchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 72 ----------QTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 72 ----------~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
+.|+ ..|..+|-.++..-+++.
T Consensus 91 ~~~~~~~~~g~t~L--~~A~~~~~~~~v~~Ll~~ 122 (153)
T 1awc_B 91 ADVNAKDMLKMTAL--HWATEHNHQEVVELLIKY 122 (153)
T ss_dssp CCTTCCCTTSCCHH--HHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCCCCCCCHH--HHHHHcCCHHHHHHHHHc
Confidence 3333 334445666666655543
No 43
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=40.18 E-value=65 Score=23.05 Aligned_cols=16 Identities=19% Similarity=0.158 Sum_probs=7.2
Q ss_pred HHHHHhhCCHHHHHHH
Q psy2691 22 AFLYLITGNLEKLKKM 37 (181)
Q Consensus 22 sfLYl~tGn~ekL~km 37 (181)
++.....|+.+.++.|
T Consensus 9 l~~A~~~g~~~~v~~l 24 (179)
T 3f6q_A 9 IFTQCREGNAVAVRLW 24 (179)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH
Confidence 3444444444444444
No 44
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=39.83 E-value=82 Score=23.82 Aligned_cols=92 Identities=15% Similarity=0.062 Sum_probs=59.9
Q ss_pred CccHHHHHHHHHHhcC------------------chhHHHHHHhhCCHHHHHHHHHHHH---Hhch--------------
Q psy2691 2 QGNHQIVEMCYQRTKN------------------FDKLAFLYLITGNLEKLKKMMKIAE---IRRD-------------- 46 (181)
Q Consensus 2 qGn~~laE~~yq~~kd------------------fd~LsfLYl~tGn~ekL~km~~iAe---~rgd-------------- 46 (181)
+|+.++|+.-.++..+ -...+.+....|+.+-++.|.+.-. .+..
T Consensus 56 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 135 (256)
T 2etb_A 56 DGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYF 135 (256)
T ss_dssp TTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCS
T ss_pred cchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccC
Confidence 4788888877766432 2245566667888888888765311 0111
Q ss_pred hhHHHHHHHhhCCHHHHHHHHHH-------------cCCchHHHHHHHhcCCcH-------HHHHHHH
Q psy2691 47 ISGQYQAALLLGEVGERIKILKS-------------CGQTSLAYLTAATHGLSE-------EAAELES 94 (181)
Q Consensus 47 ~~~~f~~~l~lgdv~~rv~vL~~-------------~g~~plAyl~Akt~g~~e-------~a~~i~~ 94 (181)
-...+|.+...|+. +.|++|.+ .|+.||-+++...++-.+ +..-+++
T Consensus 136 g~tpL~~A~~~~~~-~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~ 202 (256)
T 2etb_A 136 GELPLSLAACTKQW-DVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ 202 (256)
T ss_dssp CSSHHHHHHHTTCH-HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCH-HHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH
Confidence 44678888888886 57777777 467888777766677666 5555554
No 45
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=39.79 E-value=94 Score=21.70 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=42.5
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----HHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----QAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++=. +-.|..+|...|+.++-.+..+.+......+... ......++.+..+..+.
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 97 (184)
T 3vtx_A 18 KGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQ 97 (184)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5888888888888632 3456677888888887777766665444333222 22344566666555554
Q ss_pred H
Q psy2691 69 S 69 (181)
Q Consensus 69 ~ 69 (181)
+
T Consensus 98 ~ 98 (184)
T 3vtx_A 98 R 98 (184)
T ss_dssp H
T ss_pred H
Confidence 4
No 46
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=39.76 E-value=65 Score=19.84 Aligned_cols=12 Identities=17% Similarity=0.191 Sum_probs=5.5
Q ss_pred ccHHHHHHHHHH
Q psy2691 3 GNHQIVEMCYQR 14 (181)
Q Consensus 3 Gn~~laE~~yq~ 14 (181)
|++.-|..+|++
T Consensus 20 ~~~~~A~~~~~~ 31 (112)
T 2kck_A 20 GNYTESIDLFEK 31 (112)
T ss_dssp CCHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 444444444444
No 47
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=38.77 E-value=1.4e+02 Score=23.37 Aligned_cols=45 Identities=16% Similarity=-0.014 Sum_probs=20.5
Q ss_pred HHHHHHHhhCCHHHHHHHHHHcCCch-------HHHHHHHhcCCcHHHHHHHH
Q psy2691 49 GQYQAALLLGEVGERIKILKSCGQTS-------LAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 49 ~~f~~~l~lgdv~~rv~vL~~~g~~p-------lAyl~Akt~g~~e~a~~i~~ 94 (181)
..++.+...|+. ++|++|.+.|--+ -+...|..+|-.+++..|++
T Consensus 192 t~L~~A~~~~~~-~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 243 (285)
T 3d9h_A 192 TPLYLACENQQR-ACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMD 243 (285)
T ss_dssp CHHHHHHHTTCH-HHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCcH-HHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 345555555554 3555555433211 12233444555555555544
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=38.59 E-value=80 Score=24.21 Aligned_cols=92 Identities=16% Similarity=0.086 Sum_probs=60.4
Q ss_pred CccHHHHHHHHHHhcCc---------------------hhHHHHHHhhCCHHHHHHHHHH-------HHHhchhhHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNF---------------------DKLAFLYLITGNLEKLKKMMKI-------AEIRRDISGQYQA 53 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf---------------------d~LsfLYl~tGn~ekL~km~~i-------Ae~rgd~~~~f~~ 53 (181)
.|+.++|+.-.++.-+. ...+.+....|+.+-++.|.+. -..-.+-...+|.
T Consensus 111 ~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~ 190 (273)
T 2pnn_A 111 RRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHA 190 (273)
T ss_dssp TTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHH
T ss_pred cCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHH
Confidence 57888888888764332 2356667778899888888661 1111233467888
Q ss_pred HHhhCC--------HHHHHHHHHHc-----------------CCchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 54 ALLLGE--------VGERIKILKSC-----------------GQTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 54 ~l~lgd--------v~~rv~vL~~~-----------------g~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
+...|+ +.+.+++|.+. |+.|+ ..|..+|-.+++..|++.
T Consensus 191 A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL--~~A~~~g~~~iv~~Ll~~ 255 (273)
T 2pnn_A 191 LVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPL--ALAASSGKIGVLAYILQR 255 (273)
T ss_dssp HHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH--HHHHHTTCHHHHHHHHHH
T ss_pred HHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHH--HHHHHhChHHHHHHHHHC
Confidence 888777 26777888763 44444 556678888888877764
No 49
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=38.47 E-value=22 Score=27.81 Aligned_cols=45 Identities=11% Similarity=-0.031 Sum_probs=25.9
Q ss_pred CccHHHHHHHHHHhc---------------CchhHHHHHHhhCCHHHHH----HHHHHHHHhch
Q psy2691 2 QGNHQIVEMCYQRTK---------------NFDKLAFLYLITGNLEKLK----KMMKIAEIRRD 46 (181)
Q Consensus 2 qGn~~laE~~yq~~k---------------dfd~LsfLYl~tGn~ekL~----km~~iAe~rgd 46 (181)
+|+++-|..+|+++- -+-.|..+|...|+.++=. +..+++...++
T Consensus 168 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~ 231 (293)
T 3u3w_A 168 NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINS 231 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTB
T ss_pred cCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCc
Confidence 567777777777764 1235566677777766533 33344444443
No 50
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=38.42 E-value=1e+02 Score=21.67 Aligned_cols=90 Identities=14% Similarity=0.109 Sum_probs=55.2
Q ss_pred CccHHHHHHHHHHhcC------c--hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN------F--DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~kd------f--d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
.|++++++...++..+ . ...+.+....|+.+-++.|.+.-. ........+|.+...|+++ ++++|.+
T Consensus 12 ~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~ 90 (172)
T 3v30_A 12 QGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD-IVGLLLE 90 (172)
T ss_dssp TTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHT
T ss_pred cCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH-HHHHHHH
Confidence 5788888887766443 1 135566677788888877764311 0112245677777777754 6777765
Q ss_pred cC----------CchHHHHHHHhcCCcHHHHHHHH
Q psy2691 70 CG----------QTSLAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 70 ~g----------~~plAyl~Akt~g~~e~a~~i~~ 94 (181)
.| +.|+ ..|..+|-.++...+++
T Consensus 91 ~g~~~~~~~~~g~t~L--~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 91 RDVDINIYDWNGGTPL--LYAVRGNHVKCVEALLA 123 (172)
T ss_dssp TTCCTTCCCTTSCCHH--HHHHHTTCHHHHHHHHH
T ss_pred cCCCCCCCCCCCCCHH--HHHHHcCCHHHHHHHHH
Confidence 43 3344 34556677777777665
No 51
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=38.03 E-value=94 Score=21.69 Aligned_cols=92 Identities=12% Similarity=0.029 Sum_probs=47.1
Q ss_pred CccHHHHHHHHHHhc------Cc--hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTK------NF--DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~k------df--d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
.|++++++...++.. +- ...+.+....|+.+-++.|.+.-. ........+|.+...|+.+ ++++|.+
T Consensus 18 ~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~ 96 (165)
T 3twr_A 18 AGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYE-VAELLVK 96 (165)
T ss_dssp HTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHH
T ss_pred hCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHH-HHHHHHh
Confidence 355666665554211 11 144555566677666666644210 0111234566676677664 6666665
Q ss_pred cCCch--------HHHHHHHhcCCcHHHHHHHH
Q psy2691 70 CGQTS--------LAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 70 ~g~~p--------lAyl~Akt~g~~e~a~~i~~ 94 (181)
.|--+ -+...|..+|-.++...+++
T Consensus 97 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 97 HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 54221 13344555666666666654
No 52
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=37.81 E-value=1.2e+02 Score=22.19 Aligned_cols=91 Identities=14% Similarity=0.002 Sum_probs=58.2
Q ss_pred CccHHHHHHHHHHhcCc--------hhHHHHHHhhCCHHHHHHHHHHHH-------HhchhhHHHHHHHhhCCHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNF--------DKLAFLYLITGNLEKLKKMMKIAE-------IRRDISGQYQAALLLGEVGERIKI 66 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf--------d~LsfLYl~tGn~ekL~km~~iAe-------~rgd~~~~f~~~l~lgdv~~rv~v 66 (181)
.|+.++++...++..+. ...+.+....|+.+-++.|.+.-. ........++.+...|+++ +++.
T Consensus 12 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~ 90 (228)
T 2dzn_A 12 ENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLE-VVKS 90 (228)
T ss_dssp TTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHH-HHHH
T ss_pred hCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHH-HHHH
Confidence 57888888888765443 235666667788888877755420 0112345688888888865 6777
Q ss_pred HHHcC------------CchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 67 LKSCG------------QTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 67 L~~~g------------~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
|.+.| +.|+ ..|..+|-.++...+++.
T Consensus 91 Ll~~g~~~~~~~~~~~g~t~L--~~A~~~~~~~~~~~Ll~~ 129 (228)
T 2dzn_A 91 LYDRPLKPDLNKITNQGVTCL--HLAVGKKWFEVSQFLIEN 129 (228)
T ss_dssp HHSSSSCCCTTCCCTTCCCHH--HHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCCcccccCCcCCCCHH--HHHHHcCCHhHHHHHHHc
Confidence 76654 3344 455567777777777764
No 53
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=37.63 E-value=1.5e+02 Score=23.31 Aligned_cols=15 Identities=7% Similarity=-0.017 Sum_probs=8.4
Q ss_pred hhCCHHHHHHHHHHc
Q psy2691 56 LLGEVGERIKILKSC 70 (181)
Q Consensus 56 ~lgdv~~rv~vL~~~ 70 (181)
.+|+.++-+..+.++
T Consensus 207 ~~g~~~~A~~~~~~a 221 (307)
T 2ifu_A 207 HRADYVAAQKCVRES 221 (307)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHH
Confidence 346666666655553
No 54
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=37.18 E-value=35 Score=31.15 Aligned_cols=43 Identities=19% Similarity=0.064 Sum_probs=36.3
Q ss_pred hHHHHHHHhhCCHHHHHHHHHHcCCchHHHHHHHhcCCcHHHH
Q psy2691 48 SGQYQAALLLGEVGERIKILKSCGQTSLAYLTAATHGLSEEAA 90 (181)
Q Consensus 48 ~~~f~~~l~lgdv~~rv~vL~~~g~~plAyl~Akt~g~~e~a~ 90 (181)
.-+....|..|++++-++++++.|++.||.++|..-+-++...
T Consensus 490 ~~~i~~~L~~~~i~~A~~~a~~~~~~~la~ll~~~~~~~~~~~ 532 (753)
T 3jro_A 490 IEQIFLYLLLNDVVRASKLAIESKNGHLSVLISYLGSNDPRIR 532 (753)
T ss_dssp THHHHHHTTTTCHHHHHHHHHHTTCCHHHHHGGGCSSCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHcCChHHHHHHHHhcCCCHHHH
Confidence 4566777899999999999999999999999999988644333
No 55
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=37.02 E-value=1.1e+02 Score=21.88 Aligned_cols=68 Identities=13% Similarity=-0.001 Sum_probs=39.5
Q ss_pred CccHHHHHHHHHHhcC------------------------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----H
Q psy2691 2 QGNHQIVEMCYQRTKN------------------------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----Q 52 (181)
Q Consensus 2 qGn~~laE~~yq~~kd------------------------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~ 52 (181)
+|+++-|..+|+++-. +-.|..+|...|+.+.=.+..+.|......+... .
T Consensus 51 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 130 (198)
T 2fbn_A 51 KNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGV 130 (198)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 5778888888887642 3346667778888777666655555443332221 2
Q ss_pred HHHhhCCHHHHHHHHHH
Q psy2691 53 AALLLGEVGERIKILKS 69 (181)
Q Consensus 53 ~~l~lgdv~~rv~vL~~ 69 (181)
+.+.+|+.++.++.|.+
T Consensus 131 ~~~~~~~~~~A~~~~~~ 147 (198)
T 2fbn_A 131 ANMYFGFLEEAKENLYK 147 (198)
T ss_dssp HHHHHTCHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHH
Confidence 23445555555555544
No 56
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=36.84 E-value=39 Score=25.76 Aligned_cols=40 Identities=23% Similarity=0.152 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHcCCchHHHHHHHhcCCcHHHHHHHHhhC
Q psy2691 58 GEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLR 97 (181)
Q Consensus 58 gdv~~rv~vL~~~g~~plAyl~Akt~g~~e~a~~i~~~~~ 97 (181)
||+.+.|.-|...|+|.+|...|-.-+...+...+...+.
T Consensus 1 ~~~~~~I~~Ll~~g~~eeAf~~aL~ssd~~lv~~lc~~~d 40 (139)
T 2vxg_A 1 GAMGDSIKQLLMAGQINKAFHQALLANDLGLVEFTLRHTD 40 (139)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred CcHHHHHHHHHHCCCHHHHHHHHHHhCcHHHHHHHHHcCC
Confidence 3445555555555555555555555554444444444443
No 57
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=36.65 E-value=1.1e+02 Score=24.27 Aligned_cols=14 Identities=21% Similarity=0.330 Sum_probs=7.0
Q ss_pred hHHHHHHhhCCHHH
Q psy2691 20 KLAFLYLITGNLEK 33 (181)
Q Consensus 20 ~LsfLYl~tGn~ek 33 (181)
.|..+|...|+.++
T Consensus 268 ~la~~~~~~g~~~~ 281 (411)
T 4a1s_A 268 NLGNSHIFLGQFED 281 (411)
T ss_dssp HHHHHHHTTTCHHH
T ss_pred HHHHHHHHCcCHHH
Confidence 44445555555444
No 58
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=36.46 E-value=1.2e+02 Score=22.12 Aligned_cols=69 Identities=12% Similarity=0.030 Sum_probs=38.2
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhH-----HHHHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISG-----QYQAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~-----~f~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++-. +-.|..+|...|+.++=.+..+.|......+. .-.+.+.+|+.++.++.+.
T Consensus 56 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 135 (275)
T 1xnf_A 56 LGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLL 135 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4666677777766422 23456667777777766666555554332211 1123445666666666655
Q ss_pred Hc
Q psy2691 69 SC 70 (181)
Q Consensus 69 ~~ 70 (181)
++
T Consensus 136 ~a 137 (275)
T 1xnf_A 136 AF 137 (275)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 59
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=36.33 E-value=64 Score=23.61 Aligned_cols=68 Identities=13% Similarity=0.123 Sum_probs=40.3
Q ss_pred CccHHHHHHHHHHhcCc--------hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNF--------DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf--------d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
.|+.++++.-.++..+. ...+.+....|+.+-++.|.+.-. ........++.+...|+.+ +++.|.+
T Consensus 52 ~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~ 130 (240)
T 3eu9_A 52 NNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTS-IVAYLIA 130 (240)
T ss_dssp TTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHH
T ss_pred hCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHH-HHHHHHh
Confidence 47777777777765432 245566667777777777654210 0112235677777777754 6666665
Q ss_pred c
Q psy2691 70 C 70 (181)
Q Consensus 70 ~ 70 (181)
.
T Consensus 131 ~ 131 (240)
T 3eu9_A 131 K 131 (240)
T ss_dssp T
T ss_pred c
Confidence 4
No 60
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=36.13 E-value=1.2e+02 Score=22.02 Aligned_cols=91 Identities=13% Similarity=0.092 Sum_probs=49.0
Q ss_pred CccHHHHHHHHHHhcCch-------hHHHHHHhhCCHHHHHHHHHHHH-----HhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFD-------KLAFLYLITGNLEKLKKMMKIAE-----IRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd-------~LsfLYl~tGn~ekL~km~~iAe-----~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
.|+.++++...++.-+.. ..+.+....|+.+-++.|.+.-. ........++.+...|+.+ .++.|.+
T Consensus 35 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~ 113 (223)
T 2f8y_A 35 YSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG-MLEDLIN 113 (223)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHH-HHHHHHH
Confidence 467777777776543332 34555566677776666654211 0112234566666667654 5666655
Q ss_pred c----------CCchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 70 C----------GQTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 70 ~----------g~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
. |+.|+-+ |..+|-.++...+++.
T Consensus 114 ~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~~ 147 (223)
T 2f8y_A 114 SHADVNAVDDLGKSALHW--AAAVNNVDAAVVLLKN 147 (223)
T ss_dssp TTCCTTCBCTTSCBHHHH--HHHTTCHHHHHHHHHT
T ss_pred cCCCCcCcCCCCCcHHHH--HHHcCCHHHHHHHHHc
Confidence 4 3344433 3345556666666554
No 61
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=35.85 E-value=1.1e+02 Score=21.24 Aligned_cols=76 Identities=17% Similarity=0.171 Sum_probs=51.4
Q ss_pred CchhHHHHHHhhCCHHHHHHHHHHHHH---hchhhHHHHHHHhhCCHHHHHHHHHHcC----------CchHHHHHHHhc
Q psy2691 17 NFDKLAFLYLITGNLEKLKKMMKIAEI---RRDISGQYQAALLLGEVGERIKILKSCG----------QTSLAYLTAATH 83 (181)
Q Consensus 17 dfd~LsfLYl~tGn~ekL~km~~iAe~---rgd~~~~f~~~l~lgdv~~rv~vL~~~g----------~~plAyl~Akt~ 83 (181)
|+.+.++.....|+.+-++.|.+.... .......+|.+...|++ +.++.|.+.| +.|+- .|..+
T Consensus 1 d~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~--~A~~~ 77 (153)
T 1awc_B 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHF-STTEVLLRAGVSRDARTKVDRTPLH--MAASE 77 (153)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCH-HHHHHHHTTTCCTTCCCTTCCCHHH--HHHHH
T ss_pred CccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCCHHH--HHHHc
Confidence 466778889999999999999664210 11124678888889986 4677777664 44544 44566
Q ss_pred CCcHHHHHHHHh
Q psy2691 84 GLSEEAAELESN 95 (181)
Q Consensus 84 g~~e~a~~i~~~ 95 (181)
|-.++...+++.
T Consensus 78 ~~~~~v~~Ll~~ 89 (153)
T 1awc_B 78 GHANIVEVLLKH 89 (153)
T ss_dssp TCHHHHHHHHTT
T ss_pred ChHHHHHHHHHc
Confidence 777777777653
No 62
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=35.69 E-value=1e+02 Score=27.07 Aligned_cols=94 Identities=13% Similarity=0.074 Sum_probs=63.7
Q ss_pred CccHHHHHHHHHHhcCchhHHHHHHhhCCHHHH-HHHHH-H-HHHhc-hhhHHHHHHHhhCCHHHHHHHHHHcCCchHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKL-KKMMK-I-AEIRR-DISGQYQAALLLGEVGERIKILKSCGQTSLAY 77 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd~LsfLYl~tGn~ekL-~km~~-i-Ae~rg-d~~~~f~~~l~lgdv~~rv~vL~~~g~~plAy 77 (181)
.||++=|..+--+.+.|.--++|. ++|+.+-+ +|..+ . +...+ ....+...++..+|....|+-. ..+.-.++.
T Consensus 156 ~Gd~e~AV~~cl~~~r~adAllLA-~~gg~el~~~~vq~~Y~~k~~~~~~~~rll~~iv~~n~~d~V~~~-~l~~WkE~L 233 (399)
T 2pm7_A 156 SGNIKSAVKNSLENDLMMEAMVIA-LDSNNERLKESVKNAYFAKYGSKSSLSRILYSISKREVDDLVENL-DVSQWKFIS 233 (399)
T ss_dssp TTCHHHHHHHHHTTTCHHHHHHHH-TTCCCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTTCCHHHHHHB-CGGGHHHHH
T ss_pred cCCHHHHHHHHHHCCChHHHHHHH-HhcCHHHHHHHHHHHHHHhcccCchHHHHHHHHHccCHHHHHhcC-ChhhHHHHH
Confidence 488888888877888777755554 78999999 66654 2 22222 3566788999999999988753 344567777
Q ss_pred HHHHhcCCcH--HHHHHHHhhC
Q psy2691 78 LTAATHGLSE--EAAELESNLR 97 (181)
Q Consensus 78 l~Akt~g~~e--~a~~i~~~~~ 97 (181)
.+--||...+ .-..+...+|
T Consensus 234 a~i~t~a~~e~~ef~~Lc~~LG 255 (399)
T 2pm7_A 234 KAIQNLYPNDIAQRNEMMIKLG 255 (399)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhcCCccHhHHHHHHHHHH
Confidence 7777887654 3344444433
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=35.33 E-value=1.2e+02 Score=21.47 Aligned_cols=77 Identities=17% Similarity=0.097 Sum_probs=48.5
Q ss_pred chhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHcCCch--------HHHHHHHhcCC
Q psy2691 18 FDKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSCGQTS--------LAYLTAATHGL 85 (181)
Q Consensus 18 fd~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~g~~p--------lAyl~Akt~g~ 85 (181)
....++.....|+.+-++.|.+.-. ...+....++.+...|+++ +++.|.+.|--. -+...|..+|-
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 92 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLE-IVEVLLKNGADVNAVDHAGMTPLRLAALFGH 92 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 3455666777899998888865310 1122345788888888874 677777664221 13445566777
Q ss_pred cHHHHHHHHh
Q psy2691 86 SEEAAELESN 95 (181)
Q Consensus 86 ~e~a~~i~~~ 95 (181)
.++...+++.
T Consensus 93 ~~~~~~Ll~~ 102 (169)
T 2y1l_E 93 LEIVEVLLKN 102 (169)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 7777777663
No 64
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=35.26 E-value=40 Score=25.28 Aligned_cols=71 Identities=18% Similarity=0.130 Sum_probs=40.1
Q ss_pred HHHHHHhhCCHHHHHHHHHHHH----------HhchhhHHHHHHHhhCCHHHHHHHHHH-----------cCCchHHHHH
Q psy2691 21 LAFLYLITGNLEKLKKMMKIAE----------IRRDISGQYQAALLLGEVGERIKILKS-----------CGQTSLAYLT 79 (181)
Q Consensus 21 LsfLYl~tGn~ekL~km~~iAe----------~rgd~~~~f~~~l~lgdv~~rv~vL~~-----------~g~~plAyl~ 79 (181)
.+.+....|+.+-++.|.+... ........+|.+...|+++ .|++|.+ .|+.|+- .
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~~g~tpL~--~ 157 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLG-IVELLVSLGADVNAQEPCNGRTALH--L 157 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHH-HHHHHHHHTCCTTCCCTTTCCCHHH--H
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHH-HHHHHHHcCCCCCCCCCCCCCCHHH--H
Confidence 3455566677777776654321 1112345677777777764 6666654 3444443 3
Q ss_pred HHhcCCcHHHHHHHH
Q psy2691 80 AATHGLSEEAAELES 94 (181)
Q Consensus 80 Akt~g~~e~a~~i~~ 94 (181)
|..+|-.++...|++
T Consensus 158 A~~~~~~~~v~~Ll~ 172 (236)
T 1ikn_D 158 AVDLQNPDLVSLLLK 172 (236)
T ss_dssp HHHTTCHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHH
Confidence 445666666666665
No 65
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=35.17 E-value=1e+02 Score=20.67 Aligned_cols=69 Identities=10% Similarity=0.023 Sum_probs=39.9
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----HHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----QAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++-. +-.+..+|...|+.++-.+..+.+......+... .+...+|+.++.+..+.
T Consensus 26 ~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 105 (166)
T 1a17_A 26 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 105 (166)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 5677777777776432 2345667777788777666655554443322211 23445677777766665
Q ss_pred Hc
Q psy2691 69 SC 70 (181)
Q Consensus 69 ~~ 70 (181)
++
T Consensus 106 ~a 107 (166)
T 1a17_A 106 TV 107 (166)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 66
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=35.01 E-value=1.6e+02 Score=22.92 Aligned_cols=69 Identities=10% Similarity=0.124 Sum_probs=0.0
Q ss_pred CccHHHHHHHHHHh--------------cCchhHHHHHHhhCCHHH----HHHHHHHHHHhchhhHHHHHHHh-------
Q psy2691 2 QGNHQIVEMCYQRT--------------KNFDKLAFLYLITGNLEK----LKKMMKIAEIRRDISGQYQAALL------- 56 (181)
Q Consensus 2 qGn~~laE~~yq~~--------------kdfd~LsfLYl~tGn~ek----L~km~~iAe~rgd~~~~f~~~l~------- 56 (181)
+|+++-|..||+++ .-+..|..+|...|+.++ +.+-.++....|+...+-.+..-
T Consensus 50 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~ 129 (292)
T 1qqe_A 50 RKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEN 129 (292)
T ss_dssp TTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q ss_pred -hCCHHHHHHHHHHc
Q psy2691 57 -LGEVGERIKILKSC 70 (181)
Q Consensus 57 -lgdv~~rv~vL~~~ 70 (181)
+|+.++-+..+.++
T Consensus 130 ~lg~~~~A~~~~~~A 144 (292)
T 1qqe_A 130 DLHDYAKAIDCYELA 144 (292)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHH
No 67
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=34.78 E-value=37 Score=25.54 Aligned_cols=61 Identities=13% Similarity=-0.043 Sum_probs=40.2
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHh---chhhHHHHHHHhhCCHHH---HHHHHHHc----------CCchHHHHHHHh
Q psy2691 22 AFLYLITGNLEKLKKMMKIAEIR---RDISGQYQAALLLGEVGE---RIKILKSC----------GQTSLAYLTAAT 82 (181)
Q Consensus 22 sfLYl~tGn~ekL~km~~iAe~r---gd~~~~f~~~l~lgdv~~---rv~vL~~~----------g~~plAyl~Akt 82 (181)
+|.....|+.+.+.++.+..-.. ..-...+|.+...|+.+. .|++|.+. |+.||=+++...
T Consensus 10 l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~ 86 (186)
T 3t8k_A 10 VSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGG 86 (186)
T ss_dssp HHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 56667778888877775432111 113467899999998874 68888875 567776665554
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=34.65 E-value=1.3e+02 Score=21.66 Aligned_cols=91 Identities=14% Similarity=0.113 Sum_probs=57.8
Q ss_pred CccHHHHHHHHHHhcCch-------hHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKNFD-------KLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd-------~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.|+.++++...++.-+.. ..+.+....|+.+-++.|.+.-. ........+|.+...|+.+ ++++|.+.
T Consensus 45 ~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~ 123 (192)
T 2rfm_A 45 LGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSE-MSYFLLEH 123 (192)
T ss_dssp HTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT
T ss_pred cCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHHC
Confidence 467778877777654332 35666677788888887765311 1112345788888888875 67777765
Q ss_pred ----------CCchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 71 ----------GQTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 71 ----------g~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
|+.|+- .|..+|-.++...+++.
T Consensus 124 g~~~~~~~~~g~t~L~--~A~~~~~~~~v~~Ll~~ 156 (192)
T 2rfm_A 124 GANVNDRNLEGETPLI--VASKYGRSEIVKKLLEL 156 (192)
T ss_dssp TCCSSCCCTTCCCHHH--HHHHHTCHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCHHH--HHHHcCCHHHHHHHHHC
Confidence 344544 45556777777777764
No 69
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=34.09 E-value=1.4e+02 Score=21.95 Aligned_cols=69 Identities=13% Similarity=0.158 Sum_probs=42.7
Q ss_pred CccHHHHHHHHHHhcCch--------h----------------HHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----H
Q psy2691 2 QGNHQIVEMCYQRTKNFD--------K----------------LAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----Q 52 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd--------~----------------LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~ 52 (181)
+|+++-|..+|+++-..+ . |..+|...|+.++=.+..+.|-...-.+... .
T Consensus 17 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 96 (208)
T 3urz_A 17 AGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAE 96 (208)
T ss_dssp TTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 577888888888764332 2 6777888888877666666655444332222 2
Q ss_pred HHHhhCCHHHHHHHHHHc
Q psy2691 53 AALLLGEVGERIKILKSC 70 (181)
Q Consensus 53 ~~l~lgdv~~rv~vL~~~ 70 (181)
+.+.+|+.++.+..+.++
T Consensus 97 ~~~~~g~~~~A~~~~~~a 114 (208)
T 3urz_A 97 MQVCRGQEKDALRMYEKI 114 (208)
T ss_dssp HHHHHTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHH
Confidence 244567777776666543
No 70
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=34.06 E-value=1.4e+02 Score=21.96 Aligned_cols=69 Identities=9% Similarity=-0.019 Sum_probs=33.6
Q ss_pred CccHHHHHHHHHHhcC-----------chhHHHHHHhhCCHHHHHHHHHHHHHhchhh-----HHHHHHHhhCCHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN-----------FDKLAFLYLITGNLEKLKKMMKIAEIRRDIS-----GQYQAALLLGEVGERIK 65 (181)
Q Consensus 2 qGn~~laE~~yq~~kd-----------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~-----~~f~~~l~lgdv~~rv~ 65 (181)
+|+++-|..+|+++-. +-.|..+|...|+.++=.+..+.|......+ ..-.+.+.+|+.++-++
T Consensus 50 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 129 (272)
T 3u4t_A 50 LAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQ 129 (272)
T ss_dssp TTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHH
Confidence 3555555555555432 2345555666666665555544444332211 11123344566666655
Q ss_pred HHHHc
Q psy2691 66 ILKSC 70 (181)
Q Consensus 66 vL~~~ 70 (181)
.+.++
T Consensus 130 ~~~~a 134 (272)
T 3u4t_A 130 YMEKQ 134 (272)
T ss_dssp HHGGG
T ss_pred HHHHH
Confidence 55544
No 71
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=33.98 E-value=1.1e+02 Score=20.85 Aligned_cols=43 Identities=7% Similarity=-0.003 Sum_probs=27.0
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHh
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIR 44 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~r 44 (181)
+|+++-|..+|+++=. +-.+...|...|+.++=.+..+.|-..
T Consensus 26 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 26 KGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh
Confidence 6888888888887532 234556667777766655555544433
No 72
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=33.49 E-value=1.4e+02 Score=23.43 Aligned_cols=96 Identities=20% Similarity=0.261 Sum_probs=52.4
Q ss_pred CccHHHHHHHHHHhc------CchhHHHHHHhh-------CCHHHHHHHHHHHHH----hchhhHHHHHHHhhCCHHHHH
Q psy2691 2 QGNHQIVEMCYQRTK------NFDKLAFLYLIT-------GNLEKLKKMMKIAEI----RRDISGQYQAALLLGEVGERI 64 (181)
Q Consensus 2 qGn~~laE~~yq~~k------dfd~LsfLYl~t-------Gn~ekL~km~~iAe~----rgd~~~~f~~~l~lgdv~~rv 64 (181)
.|+.++|+.-.++.. +-.+..-|+... |+.+-++.+.+.... ...-...+|.+...|++ +.|
T Consensus 121 ~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~-~~v 199 (276)
T 4hbd_A 121 HANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRV-DVV 199 (276)
T ss_dssp TTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCH-HHH
T ss_pred CCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH-HHH
Confidence 577777777776543 334444444433 555555555432210 01123567777777774 467
Q ss_pred HHHHHcCCch--------HHHHHHHhcCCcHHHHHHHHhhCC
Q psy2691 65 KILKSCGQTS--------LAYLTAATHGLSEEAAELESNLRT 98 (181)
Q Consensus 65 ~vL~~~g~~p--------lAyl~Akt~g~~e~a~~i~~~~~~ 98 (181)
++|.+.|--+ -+...|..+|-.+++.-+++..|.
T Consensus 200 ~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ga 241 (276)
T 4hbd_A 200 KALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSC 241 (276)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTC
T ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC
Confidence 7777654211 123445566777777777764453
No 73
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=33.46 E-value=1.7e+02 Score=22.82 Aligned_cols=20 Identities=15% Similarity=0.121 Sum_probs=9.4
Q ss_pred HHHHHHhhCCHHHHHHHHHHc
Q psy2691 50 QYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 50 ~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.++.+...|+++ ++++|.+.
T Consensus 128 ~L~~A~~~~~~~-~v~~Ll~~ 147 (285)
T 3d9h_A 128 PLFNACVSGSWD-CVNLLLQH 147 (285)
T ss_dssp HHHHHHHHTCHH-HHHHHHHT
T ss_pred HHHHHHHcCHHH-HHHHHHHC
Confidence 445555555443 44444443
No 74
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=33.36 E-value=72 Score=24.16 Aligned_cols=94 Identities=11% Similarity=0.024 Sum_probs=60.3
Q ss_pred CccHHHHHHHHHHhcCch---------------------hHHHHHHhhCCHHHHHHHHHH-------HHHhchhhHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFD---------------------KLAFLYLITGNLEKLKKMMKI-------AEIRRDISGQYQA 53 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd---------------------~LsfLYl~tGn~ekL~km~~i-------Ae~rgd~~~~f~~ 53 (181)
.|+.++|+.-.++.-+.. ..+.+....|+.+-++.|.+. ...-..-+..+|.
T Consensus 103 ~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~ 182 (260)
T 3jxi_A 103 RRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHA 182 (260)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHH
T ss_pred cCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHH
Confidence 578888888877643322 345666778888888888651 1111223456777
Q ss_pred HHhhCCH--------HHHHHHHHHc-----------------CCchHHHHHHHhcCCcHHHHHHHHhhC
Q psy2691 54 ALLLGEV--------GERIKILKSC-----------------GQTSLAYLTAATHGLSEEAAELESNLR 97 (181)
Q Consensus 54 ~l~lgdv--------~~rv~vL~~~-----------------g~~plAyl~Akt~g~~e~a~~i~~~~~ 97 (181)
+...|+- .+.+++|.+. |+.| ...|..+|-.+++..|++.-.
T Consensus 183 A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tp--L~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 183 LVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSP--LMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp HHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCH--HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCH--HHHHHHcCCHHHHHHHHHhCC
Confidence 7766662 4677777765 3343 445667888888888887644
No 75
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=33.23 E-value=1e+02 Score=23.73 Aligned_cols=73 Identities=21% Similarity=0.190 Sum_probs=49.0
Q ss_pred hHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHcC----------CchHHHHHHHhcCC
Q psy2691 20 KLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSCG----------QTSLAYLTAATHGL 85 (181)
Q Consensus 20 ~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~g----------~~plAyl~Akt~g~ 85 (181)
.+++.....|+.+-++.|.+--. ...+....+|.+...|+++ +|++|.+.| +.|+ ..|..+|-
T Consensus 42 t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~ga~~~~~~~~g~tpL--~~A~~~g~ 118 (299)
T 1s70_B 42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVD-MVKFLVENGANINQPDNEGWIPL--HAAASCGY 118 (299)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTSCCHH--HHHHHHTC
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH-HHHHHHHCCCCCCCCCCCCCcHH--HHHHHcCC
Confidence 45666778899999999865310 0112246788888889875 888888764 3344 45556777
Q ss_pred cHHHHHHHHh
Q psy2691 86 SEEAAELESN 95 (181)
Q Consensus 86 ~e~a~~i~~~ 95 (181)
.++...+++.
T Consensus 119 ~~~v~~Ll~~ 128 (299)
T 1s70_B 119 LDIAEYLISQ 128 (299)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 7888777764
No 76
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=32.83 E-value=95 Score=26.35 Aligned_cols=67 Identities=10% Similarity=0.133 Sum_probs=39.6
Q ss_pred CccHHHHHHHHHHhcCch--------hH------HHHHHhhC---CHHHHHHHHHHHHHhch---hhHHHHHHHhhCCHH
Q psy2691 2 QGNHQIVEMCYQRTKNFD--------KL------AFLYLITG---NLEKLKKMMKIAEIRRD---ISGQYQAALLLGEVG 61 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd--------~L------sfLYl~tG---n~ekL~km~~iAe~rgd---~~~~f~~~l~lgdv~ 61 (181)
+|+.++|...+++....+ .+ +.+++.+| ..+.+.-..++++.-++ ....+.+.+.+|+.+
T Consensus 149 ~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~ 228 (310)
T 3mv2_B 149 NNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIA 228 (310)
T ss_dssp TTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHH
T ss_pred CCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHH
Confidence 577777777776544333 22 12244445 45555555566555554 445666777778877
Q ss_pred HHHHHHH
Q psy2691 62 ERIKILK 68 (181)
Q Consensus 62 ~rv~vL~ 68 (181)
+--++|.
T Consensus 229 eAe~~L~ 235 (310)
T 3mv2_B 229 EAQGIVE 235 (310)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777764
No 77
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=31.60 E-value=1.6e+02 Score=24.57 Aligned_cols=68 Identities=13% Similarity=-0.028 Sum_probs=38.7
Q ss_pred CccHHHHHHHHHHhcC------------------------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----H
Q psy2691 2 QGNHQIVEMCYQRTKN------------------------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----Q 52 (181)
Q Consensus 2 qGn~~laE~~yq~~kd------------------------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~ 52 (181)
+|+++-|..+|+++-. +-.|..+|...|+.++-.+..+.|-.....+... .
T Consensus 236 ~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 315 (370)
T 1ihg_A 236 SQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQ 315 (370)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 5778888888887654 2346667777777776666555554433222211 1
Q ss_pred HHHhhCCHHHHHHHHHH
Q psy2691 53 AALLLGEVGERIKILKS 69 (181)
Q Consensus 53 ~~l~lgdv~~rv~vL~~ 69 (181)
+.+.+|+.++.++.|.+
T Consensus 316 ~~~~~g~~~eA~~~l~~ 332 (370)
T 1ihg_A 316 GWQGLKEYDQALADLKK 332 (370)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHH
Confidence 23345555555555443
No 78
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=31.57 E-value=1.5e+02 Score=21.55 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=43.7
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhh-----HHHHHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDIS-----GQYQAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~-----~~f~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++-. +-.|..+|...|+.++-.++.+.+......+ ..-.+.+..|+.++.++.+.
T Consensus 50 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 129 (252)
T 2ho1_A 50 RGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLL 129 (252)
T ss_dssp TTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4666666666666432 2345667888888887777666665443222 12234556788888888877
Q ss_pred HcCC
Q psy2691 69 SCGQ 72 (181)
Q Consensus 69 ~~g~ 72 (181)
++-.
T Consensus 130 ~~~~ 133 (252)
T 2ho1_A 130 EASQ 133 (252)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 7643
No 79
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=31.28 E-value=1.4e+02 Score=20.98 Aligned_cols=71 Identities=21% Similarity=0.270 Sum_probs=41.4
Q ss_pred HHHHHhhCCHHHHHHHHHHHHH-----hchhhHHHHHHHhhCCHHHHHHHHHHcC----------CchHHHHHHHhcCCc
Q psy2691 22 AFLYLITGNLEKLKKMMKIAEI-----RRDISGQYQAALLLGEVGERIKILKSCG----------QTSLAYLTAATHGLS 86 (181)
Q Consensus 22 sfLYl~tGn~ekL~km~~iAe~-----rgd~~~~f~~~l~lgdv~~rv~vL~~~g----------~~plAyl~Akt~g~~ 86 (181)
++.....|+.+.+++|.+.... .......++.+...|++ ++|+.|.+.| +.|+ ..|..+|-.
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L--~~A~~~~~~ 82 (172)
T 3v30_A 6 IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEI-ETVRFLLEWGADPHILAKERESAL--SLASTGGYT 82 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCH-HHHHHHHHHTCCTTCCCTTCCCHH--HHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCchhhcccCCCHH--HHHHHCCCH
Confidence 4455667788887777543211 11223467777777776 4566666543 3343 345566777
Q ss_pred HHHHHHHHh
Q psy2691 87 EEAAELESN 95 (181)
Q Consensus 87 e~a~~i~~~ 95 (181)
++...+++.
T Consensus 83 ~~v~~Ll~~ 91 (172)
T 3v30_A 83 DIVGLLLER 91 (172)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHc
Confidence 777766653
No 80
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=31.22 E-value=1.8e+02 Score=24.72 Aligned_cols=69 Identities=19% Similarity=0.138 Sum_probs=45.1
Q ss_pred CccHHHHHHHHHHhcC-----------------------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHH-----HHH
Q psy2691 2 QGNHQIVEMCYQRTKN-----------------------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQ-----YQA 53 (181)
Q Consensus 2 qGn~~laE~~yq~~kd-----------------------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~-----f~~ 53 (181)
+|+++-|..+|+++-. +-.|...|+..|+.++=.+..+.|-.....+.. =.+
T Consensus 281 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a 360 (457)
T 1kt0_A 281 GGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA 360 (457)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence 6788888888887532 226777888888888766666666554433221 234
Q ss_pred HHhhCCHHHHHHHHHHc
Q psy2691 54 ALLLGEVGERIKILKSC 70 (181)
Q Consensus 54 ~l~lgdv~~rv~vL~~~ 70 (181)
.+.+|+.++.+..|.++
T Consensus 361 ~~~~g~~~~A~~~~~~a 377 (457)
T 1kt0_A 361 QLLMNEFESAKGDFEKV 377 (457)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHH
Confidence 55667777777776664
No 81
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=30.91 E-value=1.8e+02 Score=23.43 Aligned_cols=17 Identities=6% Similarity=0.034 Sum_probs=9.3
Q ss_pred HHHHHHhhCCHHHHHHH
Q psy2691 21 LAFLYLITGNLEKLKKM 37 (181)
Q Consensus 21 LsfLYl~tGn~ekL~km 37 (181)
.++.....||.+.+.++
T Consensus 154 ~L~~A~~~g~~~~v~~l 170 (301)
T 2b0o_E 154 RLWTAICNRDLLSVLEA 170 (301)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHhhhhhccCHHHHHHH
Confidence 44555555555555555
No 82
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=30.17 E-value=1.5e+02 Score=24.44 Aligned_cols=90 Identities=22% Similarity=0.218 Sum_probs=49.4
Q ss_pred CccHHHHHHHHHHhcCc-------hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKNF-------DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-------d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.|++++|+.-.++.-+. ...+.+....|+.+-++.|.+--. ...+....++.+...|+.+ .|++|.+.
T Consensus 24 ~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~ 102 (437)
T 1n11_A 24 MGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN-MVKLLLEN 102 (437)
T ss_dssp HTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH-HHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHH-HHHHHHhC
Confidence 46777777777753322 235566667777777777654210 0112235677777777763 56666654
Q ss_pred C----------CchHHHHHHHhcCCcHHHHHHHH
Q psy2691 71 G----------QTSLAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 71 g----------~~plAyl~Akt~g~~e~a~~i~~ 94 (181)
| +.|+ ..|..+|-.++...+++
T Consensus 103 ga~~~~~~~~g~t~L--~~A~~~g~~~~v~~Ll~ 134 (437)
T 1n11_A 103 NANPNLATTAGHTPL--HIAAREGHVETVLALLE 134 (437)
T ss_dssp TCCTTCCCTTCCCHH--HHHHHHTCHHHHHHHHH
T ss_pred CCCCCCCCCCCCcHH--HHHHHcCCHHHHHHHHh
Confidence 3 2333 33444555555555554
No 83
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=30.07 E-value=1.3e+02 Score=23.63 Aligned_cols=69 Identities=20% Similarity=0.156 Sum_probs=44.8
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----HHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----QAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++=. +..|..+|...|+.++-.+..+.|-.....+... ...+.+|+.++-++.|.
T Consensus 17 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 96 (281)
T 2c2l_A 17 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQ 96 (281)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5788888888886532 3457778888999888777777765544333222 22445677777666665
Q ss_pred Hc
Q psy2691 69 SC 70 (181)
Q Consensus 69 ~~ 70 (181)
++
T Consensus 97 ~a 98 (281)
T 2c2l_A 97 RA 98 (281)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 84
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=30.03 E-value=57 Score=24.90 Aligned_cols=91 Identities=13% Similarity=0.076 Sum_probs=47.9
Q ss_pred CccHHHHHHHHHHhcCc------hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHc-
Q psy2691 2 QGNHQIVEMCYQRTKNF------DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSC- 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf------d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~- 70 (181)
.|+.++++....+.-+. ...++.....|+.+-++.|.+.-. ....-...+|.+...|+++ +|++|.+.
T Consensus 15 ~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~-~v~~Ll~~g 93 (239)
T 1ycs_B 15 TNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTE-IVKFLVQFG 93 (239)
T ss_dssp ----------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHH-HHHHHHHHT
T ss_pred hhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcC
Confidence 35666666666554332 245666677899998888853210 1122346788888888865 67777765
Q ss_pred ---------CCchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 71 ---------GQTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 71 ---------g~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
|+.|| ..|..+|-.+++..+++.
T Consensus 94 a~~~~~d~~g~tpL--~~A~~~~~~~~v~~Ll~~ 125 (239)
T 1ycs_B 94 VNVNAADSDGWTPL--HCAASCNNVQVCKFLVES 125 (239)
T ss_dssp CCTTCCCTTCCCHH--HHHHHTTCHHHHHHHHHT
T ss_pred CCCCccCCCCCCHH--HHHHHcCCHHHHHHHHHc
Confidence 34454 445567877888777764
No 85
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=30.00 E-value=1.6e+02 Score=21.59 Aligned_cols=17 Identities=24% Similarity=0.384 Sum_probs=9.0
Q ss_pred HHHHHhhCCHHHHHHHH
Q psy2691 22 AFLYLITGNLEKLKKMM 38 (181)
Q Consensus 22 sfLYl~tGn~ekL~km~ 38 (181)
++.....|+.+.++++.
T Consensus 10 l~~A~~~g~~~~v~~ll 26 (231)
T 3aji_A 10 ICNLAYSGKLDELKERI 26 (231)
T ss_dssp HHHHHHHTCHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHH
Confidence 44445555555555554
No 86
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=29.82 E-value=2.4e+02 Score=23.83 Aligned_cols=46 Identities=20% Similarity=0.110 Sum_probs=22.8
Q ss_pred hHHHHHHHhhCCHHHHHHHHHHcCCch----------HHHHHHH-hcCCcHHHHHHHH
Q psy2691 48 SGQYQAALLLGEVGERIKILKSCGQTS----------LAYLTAA-THGLSEEAAELES 94 (181)
Q Consensus 48 ~~~f~~~l~lgdv~~rv~vL~~~g~~p----------lAyl~Ak-t~g~~e~a~~i~~ 94 (181)
...+|.+-..|.+ ++|++|.+.|--+ -|...|. .+|-.++++-+++
T Consensus 164 ~TpLh~Aa~~G~~-eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 164 YHAFRLAAENGHL-HVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp HHHHHHHHHTTCH-HHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred CCHHHHHHHCCCH-HHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHh
Confidence 4455555555554 3555555555321 1333444 5555555555544
No 87
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=29.78 E-value=1.7e+02 Score=23.98 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=49.5
Q ss_pred cHHHHHHHHHHhcCch---------------hHHHHHHhhCCHHHHHHHHHHH-----HHhchhhHHHHHHHhhCCHHHH
Q psy2691 4 NHQIVEMCYQRTKNFD---------------KLAFLYLITGNLEKLKKMMKIA-----EIRRDISGQYQAALLLGEVGER 63 (181)
Q Consensus 4 n~~laE~~yq~~kdfd---------------~LsfLYl~tGn~ekL~km~~iA-----e~rgd~~~~f~~~l~lgdv~~r 63 (181)
+.++++.-.++.-+.. ..+.+....|+.+-++.|.+.. ..-.+-...+|.+...|.+ ++
T Consensus 250 ~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~-~i 328 (373)
T 2fo1_E 250 QVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI-EV 328 (373)
T ss_dssp HHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH-HH
T ss_pred hHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCH-HH
Confidence 5667776666654432 2455556667777777665321 0011223566777777765 46
Q ss_pred HHHHHHcCCch--------HHHHHHHhcCCcHHHHHHHH
Q psy2691 64 IKILKSCGQTS--------LAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 64 v~vL~~~g~~p--------lAyl~Akt~g~~e~a~~i~~ 94 (181)
|++|.+.|--+ -|.-.|..+|-.+++.-|++
T Consensus 329 v~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 329 VMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 367 (373)
T ss_dssp HHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 67776654322 14455566666666665543
No 88
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=29.76 E-value=1.6e+02 Score=21.45 Aligned_cols=66 Identities=8% Similarity=-0.077 Sum_probs=40.8
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhH----HHHHHHhhCCHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISG----QYQAALLLGEVGERIKIL 67 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~----~f~~~l~lgdv~~rv~vL 67 (181)
+|+++-|..+|+++-. +-.|..+|...|+.++-.+..+.+......+. .....+..|+.++.++.+
T Consensus 90 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 167 (275)
T 1xnf_A 90 AGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVL 167 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHHHH
Confidence 5777778888877543 23466778888988877666666654433332 222334456666666655
No 89
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=29.49 E-value=1.2e+02 Score=19.79 Aligned_cols=43 Identities=19% Similarity=0.162 Sum_probs=25.4
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHh
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIR 44 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~r 44 (181)
+|+++-|..+|+++-. +-.|..+|...|+.++=.+..+.|-..
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 22 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4677777777776432 344566666677766655555554443
No 90
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=28.97 E-value=1.6e+02 Score=21.02 Aligned_cols=69 Identities=23% Similarity=0.216 Sum_probs=40.5
Q ss_pred CccHHHHHHHHHH-----hcC--chhHHHHHHhhCCHHHHHHHHHHHH-----HhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQR-----TKN--FDKLAFLYLITGNLEKLKKMMKIAE-----IRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~-----~kd--fd~LsfLYl~tGn~ekL~km~~iAe-----~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
.|+.++|+.-.++ ..+ -...+.+....|+.+-++.|.+-.. ....-...++.+...|++ +.++.|.+
T Consensus 49 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~ 127 (201)
T 3hra_A 49 NNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHI-DNVKLLLE 127 (201)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCH-HHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCH-HHHHHHHH
Confidence 4677777777763 222 2344555667788888877763211 111123457777778876 46666666
Q ss_pred cC
Q psy2691 70 CG 71 (181)
Q Consensus 70 ~g 71 (181)
.|
T Consensus 128 ~g 129 (201)
T 3hra_A 128 DG 129 (201)
T ss_dssp HC
T ss_pred cC
Confidence 55
No 91
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=28.86 E-value=1.7e+02 Score=21.37 Aligned_cols=92 Identities=15% Similarity=0.053 Sum_probs=58.9
Q ss_pred CccHHHHHHHHHHhcCc--------hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNF--------DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf--------d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
.|+++++.....+.+.. ...+.+....|+.+-++.|.+.-. ........++.+...|+.+ .++.|.+
T Consensus 16 ~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~ 94 (231)
T 3aji_A 16 SGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDE-IVKALLV 94 (231)
T ss_dssp HTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHH-HHHHHHH
Confidence 57888888888765432 245666778899988888864311 0112235788888888875 7788876
Q ss_pred cCCch--------HHHHHHHhcCCcHHHHHHHH
Q psy2691 70 CGQTS--------LAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 70 ~g~~p--------lAyl~Akt~g~~e~a~~i~~ 94 (181)
.|--+ -+...|..+|-.++...+++
T Consensus 95 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 127 (231)
T 3aji_A 95 KGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE 127 (231)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 54211 13345556777777777765
No 92
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=28.71 E-value=93 Score=24.23 Aligned_cols=93 Identities=13% Similarity=0.041 Sum_probs=51.3
Q ss_pred CccHHHHHHHHHHhc------Cc--hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTK------NF--DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~k------df--d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
+||.++++..+.+.+ +- ...+.+....|+.+-++.|.+.-. ...+....+|.+...|+++ +++.|.+
T Consensus 34 ~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~-iv~~Ll~ 112 (351)
T 3utm_A 34 SGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYE-VTELLLK 112 (351)
T ss_dssp HTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHH
T ss_pred cCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHH-HHHHHHH
Confidence 466666666665421 11 235556666777777777754210 1112234677777777754 6777776
Q ss_pred cCCch--------HHHHHHHhcCCcHHHHHHHHh
Q psy2691 70 CGQTS--------LAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 70 ~g~~p--------lAyl~Akt~g~~e~a~~i~~~ 95 (181)
.|--+ -+...|..+|-.++...+++.
T Consensus 113 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 146 (351)
T 3utm_A 113 HGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH 146 (351)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 64211 133344566767777766653
No 93
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=28.71 E-value=1.2e+02 Score=21.68 Aligned_cols=75 Identities=17% Similarity=0.167 Sum_probs=41.3
Q ss_pred HHHHHhhCCHHHHHHHHHHHH-----HhchhhHHHHHHHhhCCHHHHHHHHHHcCCch--------HHHHHHHhcCCcHH
Q psy2691 22 AFLYLITGNLEKLKKMMKIAE-----IRRDISGQYQAALLLGEVGERIKILKSCGQTS--------LAYLTAATHGLSEE 88 (181)
Q Consensus 22 sfLYl~tGn~ekL~km~~iAe-----~rgd~~~~f~~~l~lgdv~~rv~vL~~~g~~p--------lAyl~Akt~g~~e~ 88 (181)
++.....|+.+.++++..-.. ...+-...++.+...|++ ++|+.|.+.|--+ -+...|..+|-.++
T Consensus 9 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 87 (201)
T 3hra_A 9 LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDI-EIAKALIDRGADINLQNSISDSPYLYAGAQGRTEI 87 (201)
T ss_dssp HHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 455566777777777753211 011223467777777774 4666666553211 12344556677777
Q ss_pred HHHHHHhhC
Q psy2691 89 AAELESNLR 97 (181)
Q Consensus 89 a~~i~~~~~ 97 (181)
...+++..+
T Consensus 88 ~~~Ll~~~~ 96 (201)
T 3hra_A 88 LAYMLKHAT 96 (201)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHhccC
Confidence 777776544
No 94
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=28.19 E-value=1.5e+02 Score=20.36 Aligned_cols=91 Identities=16% Similarity=0.150 Sum_probs=55.8
Q ss_pred CccHHHHHHHHHHhc-Cc-----hh-HHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTK-NF-----DK-LAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~k-df-----d~-LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.|++++++...++.+ +. .+ -.+.+...|+.+-++.|.+.-. ....-...+|.+...|+++ .+++|.+.
T Consensus 12 ~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~ 90 (156)
T 1bd8_A 12 RGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD-TLKVLVEH 90 (156)
T ss_dssp HTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT
T ss_pred hCCHHHHHHHHHhhCcCccccCCCCCcHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH-HHHHHHHc
Confidence 478888888888730 11 11 1222266788888777754310 0112245788888888874 67777765
Q ss_pred C----------CchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 71 G----------QTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 71 g----------~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
| +.|+ ..|..+|-.++..-+++.
T Consensus 91 g~~~~~~~~~g~t~L--~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 91 GADVNVPDGTGALPI--HLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp TCCSCCCCTTSCCHH--HHHHHHTCHHHHHHHHTT
T ss_pred CCCCCCcCCCCCcHH--HHHHHhChHHHHHHHHhc
Confidence 4 3444 445567777888887766
No 95
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=28.05 E-value=1e+02 Score=23.83 Aligned_cols=68 Identities=12% Similarity=-0.090 Sum_probs=34.0
Q ss_pred CccHHHHHHHHHHhcCch--------------hHHHHHHhhCCHHHHHHHHHHHHH----hch-------hhHHHHHHHh
Q psy2691 2 QGNHQIVEMCYQRTKNFD--------------KLAFLYLITGNLEKLKKMMKIAEI----RRD-------ISGQYQAALL 56 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd--------------~LsfLYl~tGn~ekL~km~~iAe~----rgd-------~~~~f~~~l~ 56 (181)
+|+++-|...|++..... .|..+|...|+.++--+..+.|-. .++ ++..-.++..
T Consensus 88 ~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 3u3w_A 88 QKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 567777777777644321 355555556666554444333332 222 1222233445
Q ss_pred hCCHHHHHHHHHH
Q psy2691 57 LGEVGERIKILKS 69 (181)
Q Consensus 57 lgdv~~rv~vL~~ 69 (181)
+|+.++-+..+.+
T Consensus 168 ~g~~~~A~~~~~~ 180 (293)
T 3u3w_A 168 NGYLKKGIDLFEQ 180 (293)
T ss_dssp TTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 5666655555444
No 96
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=28.05 E-value=1.7e+02 Score=20.94 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=31.3
Q ss_pred CccHHHHHHHHHHhcCc--------hhHHHHHHhhCCHHHHHHHHHHHHHhchhhH-----HHHHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNF--------DKLAFLYLITGNLEKLKKMMKIAEIRRDISG-----QYQAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf--------d~LsfLYl~tGn~ekL~km~~iAe~rgd~~~-----~f~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++-.. -.|..+|...|+.++-.+..+.+......+. .-.+.+..|+.++.++.+.
T Consensus 70 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 149 (243)
T 2q7f_A 70 VNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQ 149 (243)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 35555555555554322 2344556666666555554444433322111 1122344555555555554
Q ss_pred H
Q psy2691 69 S 69 (181)
Q Consensus 69 ~ 69 (181)
+
T Consensus 150 ~ 150 (243)
T 2q7f_A 150 R 150 (243)
T ss_dssp H
T ss_pred H
Confidence 4
No 97
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=27.84 E-value=1.6e+02 Score=20.62 Aligned_cols=67 Identities=9% Similarity=0.040 Sum_probs=32.9
Q ss_pred ccHHHHHHHHHHhcC----------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhH-----HHHHHHhhCCHHHHHHHH
Q psy2691 3 GNHQIVEMCYQRTKN----------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISG-----QYQAALLLGEVGERIKIL 67 (181)
Q Consensus 3 Gn~~laE~~yq~~kd----------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~-----~f~~~l~lgdv~~rv~vL 67 (181)
|+++-|..+|+++-. +-.+..+|...|+.++-.+..+.+......+. .-.+.+.+|+.++.+..+
T Consensus 91 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 170 (225)
T 2vq2_A 91 NRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYF 170 (225)
T ss_dssp CCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHH
Confidence 566666666666533 22344556666666655544444433322211 112234456666655555
Q ss_pred HH
Q psy2691 68 KS 69 (181)
Q Consensus 68 ~~ 69 (181)
.+
T Consensus 171 ~~ 172 (225)
T 2vq2_A 171 KK 172 (225)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 98
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=27.63 E-value=92 Score=24.51 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=54.1
Q ss_pred CccHHHHHHHHHHhcCc-----h--hHHHHHHhhCCHHHHHHHHHHHH---Hhch-h-hHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNF-----D--KLAFLYLITGNLEKLKKMMKIAE---IRRD-I-SGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-----d--~LsfLYl~tGn~ekL~km~~iAe---~rgd-~-~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
.|+.++|+.-.++.-+. . ..+.+....|+.+-++.|.+.-. .+.. . ...++.+...|+. +.+++|.+
T Consensus 72 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~-~~v~~Ll~ 150 (285)
T 3kea_A 72 LEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDV-SIVSYFLS 150 (285)
T ss_dssp SSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCH-HHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCH-HHHHHHHh
Confidence 57777777777653322 1 34555566777777776654311 0111 1 4677777777775 46677776
Q ss_pred cCCc-------hHHHHHHHhcCCcHHHHHHHHh
Q psy2691 70 CGQT-------SLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 70 ~g~~-------plAyl~Akt~g~~e~a~~i~~~ 95 (181)
.|-- .-+...|..+|-.+++.-+++.
T Consensus 151 ~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 183 (285)
T 3kea_A 151 EIPSTFDLAILLSCIHITIKNGHVDMMILLLDY 183 (285)
T ss_dssp TSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCccccccCCccHHHHHHHcChHHHHHHHHHc
Confidence 5522 2444566677777777777653
No 99
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=27.30 E-value=2e+02 Score=21.56 Aligned_cols=44 Identities=9% Similarity=0.059 Sum_probs=28.0
Q ss_pred CccHHHHHHHHHHhcCc-----------------hhHHHHHHhhCCHHHHHHHHHHHHHhc
Q psy2691 2 QGNHQIVEMCYQRTKNF-----------------DKLAFLYLITGNLEKLKKMMKIAEIRR 45 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-----------------d~LsfLYl~tGn~ekL~km~~iAe~rg 45 (181)
+|+++-|..+|+++-.. -.|..+|...|+.++=.+..+.+....
T Consensus 206 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 206 NGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI 266 (330)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred cccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 56777777777665433 356667777888777666655554433
No 100
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=27.27 E-value=1.5e+02 Score=24.20 Aligned_cols=96 Identities=10% Similarity=-0.025 Sum_probs=53.6
Q ss_pred CccHHHHHHHHHHhcCch-------hHHHHHHhhCCHHHHHHHHHHHH-------HhchhhHHHHHHHhhCC--HHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFD-------KLAFLYLITGNLEKLKKMMKIAE-------IRRDISGQYQAALLLGE--VGERIK 65 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd-------~LsfLYl~tGn~ekL~km~~iAe-------~rgd~~~~f~~~l~lgd--v~~rv~ 65 (181)
.|+.++|+.-.++.-+.. ..+.+....|+.+-++.|.+-.. ........++.+...|. ..+.++
T Consensus 176 ~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~ 255 (373)
T 2fo1_E 176 ARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAK 255 (373)
T ss_dssp HTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHH
T ss_pred cChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHH
Confidence 366677777666533322 34555566677777766654321 11223345666666664 667777
Q ss_pred HHHHcCCch----------------HHHHHHHhcCCcHHHHHHHHhhC
Q psy2691 66 ILKSCGQTS----------------LAYLTAATHGLSEEAAELESNLR 97 (181)
Q Consensus 66 vL~~~g~~p----------------lAyl~Akt~g~~e~a~~i~~~~~ 97 (181)
+|.+.|--. -+...|..+|-.++...|++.-+
T Consensus 256 ~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 303 (373)
T 2fo1_E 256 LLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG 303 (373)
T ss_dssp HHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC
T ss_pred HHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcC
Confidence 777654211 13445556777777777776543
No 101
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=27.02 E-value=1.6e+02 Score=20.33 Aligned_cols=44 Identities=16% Similarity=0.154 Sum_probs=28.9
Q ss_pred CccHHHHHHHHHHhcCc--------------------------hhHHHHHHhhCCHHHHHHHHHHHHHhc
Q psy2691 2 QGNHQIVEMCYQRTKNF--------------------------DKLAFLYLITGNLEKLKKMMKIAEIRR 45 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf--------------------------d~LsfLYl~tGn~ekL~km~~iAe~rg 45 (181)
+|+++-|..+|+++=.+ -.|...|...|+.++=.+..+.|-...
T Consensus 24 ~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 93 (162)
T 3rkv_A 24 QKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKRE 93 (162)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcC
Confidence 57888888888876543 346667777888776555555554433
No 102
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=27.01 E-value=2.4e+02 Score=22.49 Aligned_cols=12 Identities=25% Similarity=0.263 Sum_probs=5.2
Q ss_pred HHHHHHhhCCHH
Q psy2691 21 LAFLYLITGNLE 32 (181)
Q Consensus 21 LsfLYl~tGn~e 32 (181)
|..+|...|+.+
T Consensus 228 lg~~y~~~~~~~ 239 (378)
T 3q15_A 228 IANSYDRSGDDQ 239 (378)
T ss_dssp HHHHHHHHTCHH
T ss_pred HHHHHHHCCCHH
Confidence 344444444433
No 103
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=26.55 E-value=2.3e+02 Score=22.64 Aligned_cols=17 Identities=18% Similarity=0.133 Sum_probs=7.0
Q ss_pred HHHHHHhhCCHHHHHHH
Q psy2691 21 LAFLYLITGNLEKLKKM 37 (181)
Q Consensus 21 LsfLYl~tGn~ekL~km 37 (181)
|...|...|+.++=.+.
T Consensus 66 l~~~~~~~g~~~~A~~~ 82 (450)
T 2y4t_A 66 RATVFLAMGKSKAALPD 82 (450)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHH
Confidence 33344444444443333
No 104
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=26.46 E-value=2.6e+02 Score=22.61 Aligned_cols=68 Identities=18% Similarity=0.153 Sum_probs=41.7
Q ss_pred CccHHHHHHHHHHhcC-------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHH-----HHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN-------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQ-----YQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~kd-------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~-----f~~~l~lgdv~~rv~vL~~ 69 (181)
+|+++-|..+|+++-. +-.|...|...|+.++-.+..+.+....-.+.. -.+.+.+|+.++.++.|.+
T Consensus 19 ~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 98 (514)
T 2gw1_A 19 NKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSV 98 (514)
T ss_dssp TSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 5788888888887643 455677788888888777776666554433321 1233445555555555443
No 105
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=26.26 E-value=1.8e+02 Score=20.81 Aligned_cols=69 Identities=13% Similarity=0.061 Sum_probs=42.2
Q ss_pred CccHHHHHHHHHHhcC-------chhHHHHHHhhCCHHHHHHHHHHHHHhchh------------hHHHHHHHhhCCHHH
Q psy2691 2 QGNHQIVEMCYQRTKN-------FDKLAFLYLITGNLEKLKKMMKIAEIRRDI------------SGQYQAALLLGEVGE 62 (181)
Q Consensus 2 qGn~~laE~~yq~~kd-------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~------------~~~f~~~l~lgdv~~ 62 (181)
+|+++-|..+|+++-. +-.+..+|...|+.++-.+..+.+...... ...-.+.+.+|+.++
T Consensus 18 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 97 (258)
T 3uq3_A 18 ARQFDEAIEHYNKAWELHKDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKK 97 (258)
T ss_dssp TTCHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hccHHHHHHHHHHHHHhhccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHH
Confidence 5777778877777532 345667788888887766665555443221 122234456777777
Q ss_pred HHHHHHHc
Q psy2691 63 RIKILKSC 70 (181)
Q Consensus 63 rv~vL~~~ 70 (181)
-++.+.++
T Consensus 98 A~~~~~~a 105 (258)
T 3uq3_A 98 TIEYYQKS 105 (258)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766654
No 106
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=26.19 E-value=1.7e+02 Score=22.77 Aligned_cols=74 Identities=18% Similarity=0.129 Sum_probs=39.8
Q ss_pred hHHHHHHhhCCHHHHHHHHHHHH-----HhchhhHHHHHHHh----hCCHHHHHHHHHHc----------CCchHHHHHH
Q psy2691 20 KLAFLYLITGNLEKLKKMMKIAE-----IRRDISGQYQAALL----LGEVGERIKILKSC----------GQTSLAYLTA 80 (181)
Q Consensus 20 ~LsfLYl~tGn~ekL~km~~iAe-----~rgd~~~~f~~~l~----lgdv~~rv~vL~~~----------g~~plAyl~A 80 (181)
..+.+....|+.+-++.|.+.-. ....-...++.+.+ ...--++++.|.+. |+.||- .|
T Consensus 113 T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh--~A 190 (276)
T 4hbd_A 113 TALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALM--LA 190 (276)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHH--HH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHH--HH
Confidence 45566667788888888865321 00111233444432 12233455666543 455554 44
Q ss_pred HhcCCcHHHHHHHHh
Q psy2691 81 ATHGLSEEAAELESN 95 (181)
Q Consensus 81 kt~g~~e~a~~i~~~ 95 (181)
..+|-.++...+++.
T Consensus 191 ~~~g~~~~v~~Ll~~ 205 (276)
T 4hbd_A 191 VSHGRVDVVKALLAC 205 (276)
T ss_dssp HHTTCHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHhC
Confidence 567777777777764
No 107
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=25.77 E-value=2.9e+02 Score=23.06 Aligned_cols=69 Identities=10% Similarity=-0.054 Sum_probs=41.0
Q ss_pred CccHHHHHHHHHHhc--------CchhHHHHHHhhCCHHHHHHHHHHHHHhchhhHH-----HHHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTK--------NFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQ-----YQAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~k--------dfd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~-----f~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|...|++.- -+..+..+|...|+.+.-.++.+.+......+.. -......|+.++.+++|.
T Consensus 318 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 397 (597)
T 2xpi_A 318 RSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFS 397 (597)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 567777777777653 2345666777778777766666555433322221 233445677777777776
Q ss_pred Hc
Q psy2691 69 SC 70 (181)
Q Consensus 69 ~~ 70 (181)
++
T Consensus 398 ~~ 399 (597)
T 2xpi_A 398 KS 399 (597)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 108
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=25.68 E-value=1.8e+02 Score=20.58 Aligned_cols=69 Identities=13% Similarity=0.058 Sum_probs=46.6
Q ss_pred CccHHHHHHHHHHhcC-----chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHH-----HHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKN-----FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQ-----YQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kd-----fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~-----f~~~l~lgdv~~rv~vL~~~ 70 (181)
+|+++-|..+|+++-+ +-.|..+|...|+.++=.+..+.|-.....+.. =.+.+.+|+.++.+..+.++
T Consensus 19 ~~~~~~A~~~~~~a~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 97 (213)
T 1hh8_A 19 KKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEA 97 (213)
T ss_dssp TTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 5788888889887743 345677888889988777766666554332221 12345678888888777665
No 109
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=25.59 E-value=2.2e+02 Score=21.62 Aligned_cols=93 Identities=16% Similarity=0.122 Sum_probs=53.3
Q ss_pred CccHHHHHHHHHHhcCc-------hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKNF-------DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-------d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.|+.++++.-.++.-+. ...+.+....|+.+-++.|.+.-. ...+....++.+...|+.+ ++++|.+.
T Consensus 13 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~ 91 (261)
T 2xai_A 13 HGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD-CVNLLLQH 91 (261)
T ss_dssp HTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHC
Confidence 46777777777653222 234556666788777777754210 1112235677777777764 67777665
Q ss_pred CCch-------HHHHHHHhcCCcHHHHHHHHh
Q psy2691 71 GQTS-------LAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 71 g~~p-------lAyl~Akt~g~~e~a~~i~~~ 95 (181)
|--+ -+...|..+|-.++...+++.
T Consensus 92 g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (261)
T 2xai_A 92 GASVQPESDLASPIHEAARRGHVECVNSLIAY 123 (261)
T ss_dssp TCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 4211 123445566766777766653
No 110
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=25.55 E-value=2.3e+02 Score=21.88 Aligned_cols=22 Identities=23% Similarity=0.501 Sum_probs=12.6
Q ss_pred chhHHHHHHhhCCHHHHHHHHH
Q psy2691 18 FDKLAFLYLITGNLEKLKKMMK 39 (181)
Q Consensus 18 fd~LsfLYl~tGn~ekL~km~~ 39 (181)
+..|..+|...|+.++-.+..+
T Consensus 230 ~~~la~~~~~~g~~~~A~~~~~ 251 (406)
T 3sf4_A 230 YSNLGNAYIFLGEFETASEYYK 251 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHH
Confidence 4455666777777665444433
No 111
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=25.43 E-value=2.3e+02 Score=23.19 Aligned_cols=68 Identities=13% Similarity=0.111 Sum_probs=33.8
Q ss_pred CccHHHHHHHHHHhc--------CchhHHHHHHhhCCHHHHHHHHHHHHHhchhh-----HHHHHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTK--------NFDKLAFLYLITGNLEKLKKMMKIAEIRRDIS-----GQYQAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~k--------dfd~LsfLYl~tGn~ekL~km~~iAe~rgd~~-----~~f~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++- -+-.+..+|...|+.++-.+..+.+......+ ..-.+.+.+|+.++.+++|.
T Consensus 289 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 368 (537)
T 3fp2_A 289 KENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFN 368 (537)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 455555555555432 23345556666666666555554444332211 12233445566666666554
Q ss_pred H
Q psy2691 69 S 69 (181)
Q Consensus 69 ~ 69 (181)
+
T Consensus 369 ~ 369 (537)
T 3fp2_A 369 E 369 (537)
T ss_dssp H
T ss_pred H
Confidence 4
No 112
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=25.43 E-value=1.6e+02 Score=19.95 Aligned_cols=67 Identities=13% Similarity=0.076 Sum_probs=34.6
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----HHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----QAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++-. +-.|..+|...|+.+.=.+..+.|-.....+... .+.+.+|+.++-++.|.
T Consensus 31 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 31 AGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4667777777766421 2245566677777766555555554443322221 12334455555444444
No 113
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=25.37 E-value=1.3e+02 Score=18.77 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=21.4
Q ss_pred ccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHH
Q psy2691 3 GNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEI 43 (181)
Q Consensus 3 Gn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~ 43 (181)
|+++-|...|++.-. +-.+..+|...|+.++-.++.+.+..
T Consensus 15 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 63 (136)
T 2fo7_A 15 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 63 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 455555555554321 22345556666776665555554443
No 114
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=25.35 E-value=2.7e+02 Score=22.44 Aligned_cols=68 Identities=12% Similarity=0.026 Sum_probs=40.3
Q ss_pred CccHHHHHHHHHHhc-----------------------CchhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----HH
Q psy2691 2 QGNHQIVEMCYQRTK-----------------------NFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----QA 53 (181)
Q Consensus 2 qGn~~laE~~yq~~k-----------------------dfd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~~ 53 (181)
+|+++-|..+|+++- -+-.|..+|...|+.++=.+..+.|-.....+... .+
T Consensus 160 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 239 (336)
T 1p5q_A 160 EGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEA 239 (336)
T ss_dssp HTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 477777888887653 23456677788888777666666655443322221 23
Q ss_pred HHhhCCHHHHHHHHHH
Q psy2691 54 ALLLGEVGERIKILKS 69 (181)
Q Consensus 54 ~l~lgdv~~rv~vL~~ 69 (181)
.+.+|+.++.+..|.+
T Consensus 240 ~~~~g~~~~A~~~~~~ 255 (336)
T 1p5q_A 240 HLAVNDFELARADFQK 255 (336)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHH
Confidence 4455666666655544
No 115
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=25.13 E-value=1.3e+02 Score=18.80 Aligned_cols=42 Identities=19% Similarity=0.100 Sum_probs=22.0
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEI 43 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~ 43 (181)
+|+++-|..+|+++-. +-.+..+|...|+.++-.+..+.+..
T Consensus 25 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 25 VENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAIC 74 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHh
Confidence 4566666666665432 22345555666666555554444433
No 116
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=24.86 E-value=2.2e+02 Score=21.26 Aligned_cols=69 Identities=10% Similarity=0.011 Sum_probs=39.4
Q ss_pred CccHHHHHHHHHHhc--------CchhHHHHHHhhCCHHHHHHHHHHHHHhchhhH-----HHHHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTK--------NFDKLAFLYLITGNLEKLKKMMKIAEIRRDISG-----QYQAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~k--------dfd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~-----~f~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++- -+-.|..+|...|+.++-.+..+.+......+. .-.+.+..|+.++.++.+.
T Consensus 151 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 230 (327)
T 3cv0_A 151 PNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYN 230 (327)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 355666666666642 233456677778887776666665544332221 1223445677777777666
Q ss_pred Hc
Q psy2691 69 SC 70 (181)
Q Consensus 69 ~~ 70 (181)
++
T Consensus 231 ~a 232 (327)
T 3cv0_A 231 RA 232 (327)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 117
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=24.34 E-value=68 Score=23.86 Aligned_cols=77 Identities=21% Similarity=0.180 Sum_probs=52.0
Q ss_pred cCchhHHHHHHhhCCHHHHHHHHHHH----HHhchhhHHHHHHHhhCCHHHHHHHHHHc-----------CCchHHHHHH
Q psy2691 16 KNFDKLAFLYLITGNLEKLKKMMKIA----EIRRDISGQYQAALLLGEVGERIKILKSC-----------GQTSLAYLTA 80 (181)
Q Consensus 16 kdfd~LsfLYl~tGn~ekL~km~~iA----e~rgd~~~~f~~~l~lgdv~~rv~vL~~~-----------g~~plAyl~A 80 (181)
.+-...+++....|+.+-++.|.+.- .....-...+|.+...|.+ ++|++|.+. |+.||- .|
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~g~~~~~~d~~g~tpL~--~A 147 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHK-DIVEMLFTQPNIELNQQNKLGDTALH--AA 147 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHTTSTTCCCCCCCTTSCCHHH--HH
T ss_pred cccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCH-HHHHHHHcCCCCCccccCCCCCCHHH--HH
Confidence 34456777888899999999886521 0112234678888888885 578888765 344554 45
Q ss_pred HhcCCcHHHHHHHHh
Q psy2691 81 ATHGLSEEAAELESN 95 (181)
Q Consensus 81 kt~g~~e~a~~i~~~ 95 (181)
..+|-.+++..|++.
T Consensus 148 ~~~~~~~~v~~Ll~~ 162 (222)
T 3ehr_A 148 AWKGYADIVQLLLAK 162 (222)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHc
Confidence 567878888888775
No 118
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=23.95 E-value=1.7e+02 Score=23.78 Aligned_cols=18 Identities=6% Similarity=0.062 Sum_probs=13.2
Q ss_pred CCccHHHHHHHHHHhcCc
Q psy2691 1 MQGNHQIVEMCYQRTKNF 18 (181)
Q Consensus 1 ~qGn~~laE~~yq~~kdf 18 (181)
.+|++.-|..+|+++-.+
T Consensus 191 ~~g~~~~A~~~y~~Al~~ 208 (338)
T 2if4_A 191 KEEKLEEAMQQYEMAIAY 208 (338)
T ss_dssp SSSCCHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHH
Confidence 367888888888886443
No 119
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=23.91 E-value=3e+02 Score=23.26 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=31.6
Q ss_pred HHHHHhhCCHHHHHHHHHHH----H--HhchhhHHHHHHH-hhCCHHHHHHHHHHcCCc-hHHHHHHHhcCCcHHHHHHH
Q psy2691 22 AFLYLITGNLEKLKKMMKIA----E--IRRDISGQYQAAL-LLGEVGERIKILKSCGQT-SLAYLTAATHGLSEEAAELE 93 (181)
Q Consensus 22 sfLYl~tGn~ekL~km~~iA----e--~rgd~~~~f~~~l-~lgdv~~rv~vL~~~g~~-plAyl~Akt~g~~e~a~~i~ 93 (181)
+.+....|+.+-++-|.+.- . ...+....++.+- ..|.+ ++|++|.+.|.. .-|...|..+|-.++..-+.
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~-eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~lL~ 245 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH-NVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIA 245 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCH-HHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCH-HHHHHHHhCCCccchHHHHHHHCCCHHHHHHHH
Confidence 34444555555555553320 0 1112234555555 55554 356666554321 11222344455555444443
Q ss_pred H
Q psy2691 94 S 94 (181)
Q Consensus 94 ~ 94 (181)
+
T Consensus 246 ~ 246 (376)
T 2aja_A 246 R 246 (376)
T ss_dssp H
T ss_pred h
Confidence 3
No 120
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=23.59 E-value=2e+02 Score=20.50 Aligned_cols=14 Identities=7% Similarity=0.041 Sum_probs=6.5
Q ss_pred hhCCHHHHHHHHHH
Q psy2691 56 LLGEVGERIKILKS 69 (181)
Q Consensus 56 ~lgdv~~rv~vL~~ 69 (181)
..|+.++.++.+.+
T Consensus 151 ~~~~~~~A~~~~~~ 164 (258)
T 3uq3_A 151 TKSDWPNAVKAYTE 164 (258)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHH
Confidence 34555554444443
No 121
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=23.53 E-value=2.4e+02 Score=22.53 Aligned_cols=41 Identities=17% Similarity=0.172 Sum_probs=21.8
Q ss_pred CccHHHHHHHHHHhc--------CchhHHHHHHhhCCHHHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTK--------NFDKLAFLYLITGNLEKLKKMMKIAE 42 (181)
Q Consensus 2 qGn~~laE~~yq~~k--------dfd~LsfLYl~tGn~ekL~km~~iAe 42 (181)
+|+++-|..+|+++- -+-.|..+|...|+.++-.+..+.+.
T Consensus 190 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 238 (450)
T 2y4t_A 190 EGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECL 238 (450)
T ss_dssp TTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345555555555432 12345566777777666555544443
No 122
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=23.50 E-value=1.9e+02 Score=20.14 Aligned_cols=69 Identities=9% Similarity=-0.075 Sum_probs=32.7
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhH-----HHHHHHhh-CCHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISG-----QYQAALLL-GEVGERIKIL 67 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~-----~f~~~l~l-gdv~~rv~vL 67 (181)
+|+++-|..+|++.-. +-.|..+|...|+.++-.+..+.+......+. .-.+.+.. |+.++.++.+
T Consensus 21 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~ 100 (225)
T 2vq2_A 21 GQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYF 100 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3555555555554321 22345556666666555554444433222111 11223344 6666666665
Q ss_pred HHc
Q psy2691 68 KSC 70 (181)
Q Consensus 68 ~~~ 70 (181)
.++
T Consensus 101 ~~~ 103 (225)
T 2vq2_A 101 DKA 103 (225)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 123
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=23.43 E-value=2.1e+02 Score=20.64 Aligned_cols=69 Identities=12% Similarity=-0.046 Sum_probs=45.7
Q ss_pred CccHHHHHHHHHHhcCch---------hHHHHHHhhCCHHHHHHHHHHHHHhchhhHH-----HHHHHhhCCHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFD---------KLAFLYLITGNLEKLKKMMKIAEIRRDISGQ-----YQAALLLGEVGERIKIL 67 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd---------~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~-----f~~~l~lgdv~~rv~vL 67 (181)
+|+++-|..+|+++-... .+..+|...|+.++=.+..+.|-.....+.. =.+...+|+.++.++.|
T Consensus 20 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 99 (228)
T 4i17_A 20 AKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATL 99 (228)
T ss_dssp TTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHH
Confidence 688888888888765443 3667788889888777776666554433222 22345667777777776
Q ss_pred HHc
Q psy2691 68 KSC 70 (181)
Q Consensus 68 ~~~ 70 (181)
.++
T Consensus 100 ~~a 102 (228)
T 4i17_A 100 TEG 102 (228)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 124
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=23.36 E-value=2.7e+02 Score=21.86 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=22.1
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEI 43 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~ 43 (181)
+|+++-|..+|+++-. +-.|..+|...|+.++-.++.+.+..
T Consensus 250 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 299 (388)
T 1w3b_A 250 QGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR 299 (388)
T ss_dssp TTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4566666666665432 22345556666666655554444433
No 125
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=23.00 E-value=2.2e+02 Score=20.73 Aligned_cols=90 Identities=24% Similarity=0.188 Sum_probs=46.7
Q ss_pred CccHHHHHHHHHHhcCc-------hhHHHHHHhhCCHHHHHHHHHHH----HHhchhhHHHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKNF-------DKLAFLYLITGNLEKLKKMMKIA----EIRRDISGQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-------d~LsfLYl~tGn~ekL~km~~iA----e~rgd~~~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.||.++|+.-.++--|. ...+.+....|+.+-++.+.+-- ....+-...++.+...|++ ++|++|.+.
T Consensus 14 ~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~-~~v~~Ll~~ 92 (169)
T 4gpm_A 14 NGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK-EVVKLLISK 92 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCH-HHHHHHHHC
Confidence 56777777766653222 12444555566666665553210 0011123456666666765 366666655
Q ss_pred C----------CchHHHHHHHhcCCcHHHHHHHH
Q psy2691 71 G----------QTSLAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 71 g----------~~plAyl~Akt~g~~e~a~~i~~ 94 (181)
| +.|| ..|..+|-.++...+++
T Consensus 93 gadvn~~d~~G~TpL--h~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 93 GADVNAKDSDGRTPL--HHAAENGHKEVVKLLIS 124 (169)
T ss_dssp TCCTTCCCTTSCCHH--HHHHHTTCHHHHHHHHH
T ss_pred cCCCCCCCCCCCCHH--HHHHHcCCHHHHHHHHH
Confidence 4 3333 33445666666665554
No 126
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=22.79 E-value=2.2e+02 Score=20.59 Aligned_cols=91 Identities=15% Similarity=0.108 Sum_probs=59.4
Q ss_pred CccHHHHHHHHHHhc-C-------chhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTK-N-------FDKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 2 qGn~~laE~~yq~~k-d-------fd~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
.|+.++++.-.++.. + -...+.+....|+.+-++.|.+--. ........+|.+...|+++ ++++|.+
T Consensus 68 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~ 146 (223)
T 2f8y_A 68 ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLK 146 (223)
T ss_dssp TTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHH-HHHHHHH
Confidence 578888888887654 2 2345667778899988888865210 1112346788888888865 6777776
Q ss_pred cC----------CchHHHHHHHhcCCcHHHHHHHHh
Q psy2691 70 CG----------QTSLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 70 ~g----------~~plAyl~Akt~g~~e~a~~i~~~ 95 (181)
.| +.|+ ..|..+|-.++...+++.
T Consensus 147 ~g~~~~~~~~~g~t~L--~~A~~~~~~~~v~~Ll~~ 180 (223)
T 2f8y_A 147 NGANKDMQNNREETPL--FLAAREGSYETAKVLLDH 180 (223)
T ss_dssp TTCCTTCCCTTCCCHH--HHHHHHTCHHHHHHHHHT
T ss_pred cCCCCCCcCCCCcCHH--HHHHHcCCHHHHHHHHHc
Confidence 53 4455 445567777787777664
No 127
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=22.55 E-value=1e+02 Score=21.59 Aligned_cols=90 Identities=13% Similarity=0.125 Sum_probs=53.9
Q ss_pred CccHHHHHHHHHHhcCch-----h-HHHHHHhhCCHHHHHHHHHHHH----HhchhhH-HHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKNFD-----K-LAFLYLITGNLEKLKKMMKIAE----IRRDISG-QYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd-----~-LsfLYl~tGn~ekL~km~~iAe----~rgd~~~-~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.|+.++|+...++.-+.. + -.|.|...|+.+-++.|.+.-. ....... .+|.+...|++ ++|++|.+.
T Consensus 22 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~-~~v~~Ll~~ 100 (156)
T 1bi7_B 22 RGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFL-DTLVVLHRA 100 (156)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSCTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCH-HHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCH-HHHHHHHHc
Confidence 478888888887643322 1 1223345788887777754210 0011223 78888888887 577777765
Q ss_pred ----------CCchHHHHHHHhcCCcHHHHHHHH
Q psy2691 71 ----------GQTSLAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 71 ----------g~~plAyl~Akt~g~~e~a~~i~~ 94 (181)
|+.|+ ..|..+|-.++..-|++
T Consensus 101 ga~~~~~d~~g~tpl--~~A~~~~~~~~v~~Ll~ 132 (156)
T 1bi7_B 101 GARLDVRDAWGRLPV--DLAEELGHRDVARYLRA 132 (156)
T ss_dssp TCCSSCCCTTCCCHH--HHHHHHTCHHHHHHHSS
T ss_pred CCCCcccCCCCCCHH--HHHHHhCHHHHHHHHHH
Confidence 34444 44556677777766654
No 128
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=22.54 E-value=2.9e+02 Score=23.11 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=10.3
Q ss_pred hHHHHHHhhCCHHHHHHHHHHH
Q psy2691 20 KLAFLYLITGNLEKLKKMMKIA 41 (181)
Q Consensus 20 ~LsfLYl~tGn~ekL~km~~iA 41 (181)
.|..+|...|+.++=.++.+.+
T Consensus 446 ~l~~~~~~~g~~~~A~~~~~~~ 467 (597)
T 2xpi_A 446 FLGMQHMQLGNILLANEYLQSS 467 (597)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 3444555555555444444333
No 129
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=22.52 E-value=2.1e+02 Score=20.32 Aligned_cols=68 Identities=7% Similarity=0.001 Sum_probs=41.4
Q ss_pred CccHHHHHHHHHHhcC--------chhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----HHHHhhCCHHHHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKN--------FDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----QAALLLGEVGERIKILK 68 (181)
Q Consensus 2 qGn~~laE~~yq~~kd--------fd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~~~l~lgdv~~rv~vL~ 68 (181)
+|+++-|..+|+++-. +-.+..+|...|+.++-.++.+.+......+... .+.+..|+.++.++.|.
T Consensus 104 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 183 (243)
T 2q7f_A 104 KEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFA 183 (243)
T ss_dssp TTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5777777777776533 2346667888888888777766665443322211 22345667666666665
Q ss_pred H
Q psy2691 69 S 69 (181)
Q Consensus 69 ~ 69 (181)
+
T Consensus 184 ~ 184 (243)
T 2q7f_A 184 A 184 (243)
T ss_dssp H
T ss_pred H
Confidence 4
No 130
>2rmf_A Urocortin, HUCN1; CRF ligand, sauvagine, astressin2B, urocortins, urotensins, CRF receptors, amidation, cleavage on PAIR of basic residues, hormone; NMR {Synthetic} SCOP: j.16.1.1
Probab=22.45 E-value=75 Score=19.66 Aligned_cols=27 Identities=11% Similarity=0.277 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHhhCC
Q psy2691 33 KLKKMMKIAEIRRDISGQYQAALLLGE 59 (181)
Q Consensus 33 kL~km~~iAe~rgd~~~~f~~~l~lgd 59 (181)
-|++|..+|...+.--.+-+|..++.+
T Consensus 13 lLR~miemar~e~~~qqA~~NR~~ld~ 39 (40)
T 2rmf_A 13 LLRTLLELARTQSQRERAEQNRIIFDS 39 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 478888888877777777777766654
No 131
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=22.39 E-value=1.8e+02 Score=20.03 Aligned_cols=45 Identities=11% Similarity=-0.037 Sum_probs=24.7
Q ss_pred CccHHHHHHHHHHhcCchhHHHHHHhhCCHHHHHHHHHHHHHhchhhHHHHHH
Q psy2691 2 QGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAA 54 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd~LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f~~~ 54 (181)
+|+++-|..+|+++-.. .-.+..-+..++.+....|++..+..+.
T Consensus 58 ~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 102 (164)
T 3sz7_A 58 SGQHEKAAEDAELATVV--------DPKYSKAWSRLGLARFDMADYKGAKEAY 102 (164)
T ss_dssp TTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHH
Confidence 45566666666554222 2345555666666666666666555443
No 132
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=22.26 E-value=1.2e+02 Score=21.56 Aligned_cols=40 Identities=25% Similarity=0.176 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHHHhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 30 NLEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 30 n~ekL~km~~iAe~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
-+..++++.++|+..||+.++=....++.+.++.+..|..
T Consensus 100 ~~~~~~~~~~~a~~~~D~~t~~~l~~~l~e~ek~~w~l~~ 139 (142)
T 1ji5_A 100 MLVELKKGMEIAQNSDDEMTSDLLLGIYTELEKHAWMLRA 139 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788888888888887776667788888888888764
No 133
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=21.78 E-value=2.1e+02 Score=21.55 Aligned_cols=21 Identities=14% Similarity=0.075 Sum_probs=11.3
Q ss_pred HHHHHHHhhCCHHHHHHHHHHc
Q psy2691 49 GQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 49 ~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
..+|.+...|+++ ++++|.+.
T Consensus 159 t~L~~A~~~~~~~-~v~~Ll~~ 179 (253)
T 1yyh_A 159 SALHWAAAVNNVD-AAVVLLKN 179 (253)
T ss_dssp BHHHHHHHHTCHH-HHHHHHHT
T ss_pred CHHHHHHHcCCHH-HHHHHHHc
Confidence 4555555566544 55555544
No 134
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=21.77 E-value=3.6e+02 Score=22.69 Aligned_cols=91 Identities=9% Similarity=0.010 Sum_probs=53.4
Q ss_pred ccHHHHHHHHHHhcCc---------hhHHHHHHhhCCHHHHHHHHHHH----HHhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 3 GNHQIVEMCYQRTKNF---------DKLAFLYLITGNLEKLKKMMKIA----EIRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 3 Gn~~laE~~yq~~kdf---------d~LsfLYl~tGn~ekL~km~~iA----e~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
|++.+++..+.+.-+. ...+.+....|+.+-++.|.+-- ..-..-+..+|.+...|.+ ++|++|.+
T Consensus 211 g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~-~~v~~LL~ 289 (368)
T 3jue_A 211 PSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHT-GLACLFLK 289 (368)
T ss_dssp CCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcH-HHHHHHHH
Confidence 7788888777654332 23455666677877777665421 0011223567888888875 47777776
Q ss_pred cCCch--------HHHHHHHhcCCcHHHHHHHH
Q psy2691 70 CGQTS--------LAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 70 ~g~~p--------lAyl~Akt~g~~e~a~~i~~ 94 (181)
.|--+ -+.-.|..+|-.++..-|+.
T Consensus 290 ~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~ 322 (368)
T 3jue_A 290 RGADLGARDSEGRDPLTIAMETANADIVTLLRL 322 (368)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 54211 13344566777777766654
No 135
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=21.58 E-value=1.7e+02 Score=25.31 Aligned_cols=90 Identities=18% Similarity=0.130 Sum_probs=59.6
Q ss_pred CccHHHHHHHHHHhcCc-----------hhHHHHHHh-----hCCHHHHHHHHHHH----HHhchhhHHHHHHHhhCCHH
Q psy2691 2 QGNHQIVEMCYQRTKNF-----------DKLAFLYLI-----TGNLEKLKKMMKIA----EIRRDISGQYQAALLLGEVG 61 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-----------d~LsfLYl~-----tGn~ekL~km~~iA----e~rgd~~~~f~~~l~lgdv~ 61 (181)
.||+.+|...+.+.-+. .+-.-|+.. .|+.+-++.|.+-- ..-.+-+..+|.+...|..+
T Consensus 142 ~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~ 221 (497)
T 3lvq_E 142 NRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPD 221 (497)
T ss_dssp HTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHH
T ss_pred ccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHH
Confidence 47888888888776553 334455555 78888888775521 01112345788888888875
Q ss_pred HHHHHHHHcC----------CchHHHHHHHhcCCcHHHHHHHH
Q psy2691 62 ERIKILKSCG----------QTSLAYLTAATHGLSEEAAELES 94 (181)
Q Consensus 62 ~rv~vL~~~g----------~~plAyl~Akt~g~~e~a~~i~~ 94 (181)
+|++|.+.| +.|+ ..|..+|-.+++.-|++
T Consensus 222 -~v~~Ll~~ga~~~~~d~~g~tpl--~~A~~~~~~~~~~~Ll~ 261 (497)
T 3lvq_E 222 -CLKLLLKGRALVGTVNEAGETAL--DIARKKHHKECEELLEQ 261 (497)
T ss_dssp -HHHHHHHTCCCCSCCCTTCCCHH--HHHHHTTCHHHHHHHHH
T ss_pred -HHHHHHHcCCCCCCcCCCCCCHH--HHHHHcCCHHHHHHHHH
Confidence 888888765 3444 45667787777776665
No 136
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=21.49 E-value=2.6e+02 Score=20.87 Aligned_cols=21 Identities=19% Similarity=0.302 Sum_probs=9.6
Q ss_pred HHHHHHhhCCHHHHHHHHHHH
Q psy2691 21 LAFLYLITGNLEKLKKMMKIA 41 (181)
Q Consensus 21 LsfLYl~tGn~ekL~km~~iA 41 (181)
|..+|...|+.++=.++.+.+
T Consensus 165 l~~~~~~~~~~~~A~~~~~~a 185 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQA 185 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHH
Confidence 444455555554444444433
No 137
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=21.45 E-value=1.9e+02 Score=19.29 Aligned_cols=18 Identities=22% Similarity=0.562 Sum_probs=7.6
Q ss_pred HHHHHHhhCCHHHHHHHH
Q psy2691 21 LAFLYLITGNLEKLKKMM 38 (181)
Q Consensus 21 LsfLYl~tGn~ekL~km~ 38 (181)
+..+|...|+.++-.+..
T Consensus 48 ~~~~~~~~~~~~~A~~~~ 65 (186)
T 3as5_A 48 LGIAYVKTGAVDRGTELL 65 (186)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 334444444444433333
No 138
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=21.40 E-value=2.6e+02 Score=20.97 Aligned_cols=21 Identities=19% Similarity=0.235 Sum_probs=9.3
Q ss_pred HHHHHHhhCCHHHHHHHHHHH
Q psy2691 21 LAFLYLITGNLEKLKKMMKIA 41 (181)
Q Consensus 21 LsfLYl~tGn~ekL~km~~iA 41 (181)
|..+|...|+.++-.+..+.+
T Consensus 194 la~~~~~~~~~~~A~~~~~~a 214 (359)
T 3ieg_A 194 ISTLYYQLGDHELSLSEVREC 214 (359)
T ss_dssp HHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 444444455544444433333
No 139
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=21.36 E-value=2.9e+02 Score=21.47 Aligned_cols=93 Identities=9% Similarity=-0.026 Sum_probs=55.7
Q ss_pred CccHHHHHHHHHHhcCch-----hHHHHHHhhCCHHHHHHHHHHH----HHhchhhHHHHHHHhhCCHHHHHHHHHHcCC
Q psy2691 2 QGNHQIVEMCYQRTKNFD-----KLAFLYLITGNLEKLKKMMKIA----EIRRDISGQYQAALLLGEVGERIKILKSCGQ 72 (181)
Q Consensus 2 qGn~~laE~~yq~~kdfd-----~LsfLYl~tGn~ekL~km~~iA----e~rgd~~~~f~~~l~lgdv~~rv~vL~~~g~ 72 (181)
.|+.++|+.-.++.-+.. ..+.+....|+.+-++.|.+-- .........+|.+...|+++ ++++|.+.|-
T Consensus 41 ~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~-~v~~Ll~~ga 119 (285)
T 3kea_A 41 DNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQ-TVKLFVKKNW 119 (285)
T ss_dssp TTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHHCG
T ss_pred cCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHhcCC
Confidence 577888888777654432 3556666678888777775421 01112235677787788764 6777776542
Q ss_pred c---------hHHHHHHHhcCCcHHHHHHHHh
Q psy2691 73 T---------SLAYLTAATHGLSEEAAELESN 95 (181)
Q Consensus 73 ~---------plAyl~Akt~g~~e~a~~i~~~ 95 (181)
- .-+...|..+|-.++...+++.
T Consensus 120 ~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~ 151 (285)
T 3kea_A 120 RLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE 151 (285)
T ss_dssp GGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT
T ss_pred CCCccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 1 1233445567777777776654
No 140
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=21.33 E-value=2.1e+02 Score=19.79 Aligned_cols=49 Identities=10% Similarity=0.047 Sum_probs=21.8
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHhchhhHHH-----HHHHhhCCHHHHHHHHHH
Q psy2691 21 LAFLYLITGNLEKLKKMMKIAEIRRDISGQY-----QAALLLGEVGERIKILKS 69 (181)
Q Consensus 21 LsfLYl~tGn~ekL~km~~iAe~rgd~~~~f-----~~~l~lgdv~~rv~vL~~ 69 (181)
+..+|...++.+.-.+....|......+... .+...+|+.++-++.+.+
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 132 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEK 132 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 3445555566555555544444332222211 123334555555554443
No 141
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=20.96 E-value=2.8e+02 Score=21.09 Aligned_cols=69 Identities=17% Similarity=0.088 Sum_probs=46.7
Q ss_pred CccHHHHHHHHHHhcCc-------hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHc
Q psy2691 2 QGNHQIVEMCYQRTKNF-------DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSC 70 (181)
Q Consensus 2 qGn~~laE~~yq~~kdf-------d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~ 70 (181)
.|++++|+....+.-+. ...+.+....|+.+-++.|.+.-. ........+|.+...|+++ .|++|.+.
T Consensus 50 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~ 128 (299)
T 1s70_B 50 SGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLD-IAEYLISQ 128 (299)
T ss_dssp HTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHhC
Confidence 48889999888865443 245666677899888888765210 0111234788888899875 78888876
Q ss_pred C
Q psy2691 71 G 71 (181)
Q Consensus 71 g 71 (181)
|
T Consensus 129 g 129 (299)
T 1s70_B 129 G 129 (299)
T ss_dssp T
T ss_pred C
Confidence 5
No 142
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=20.53 E-value=2.6e+02 Score=20.56 Aligned_cols=67 Identities=7% Similarity=0.016 Sum_probs=34.5
Q ss_pred cHHHHHHHHHHhcC------chhHHHHHHh----hCCHHHHHHHHHHHHHhch----hhHHHHH-HHh------hCCHHH
Q psy2691 4 NHQIVEMCYQRTKN------FDKLAFLYLI----TGNLEKLKKMMKIAEIRRD----ISGQYQA-ALL------LGEVGE 62 (181)
Q Consensus 4 n~~laE~~yq~~kd------fd~LsfLYl~----tGn~ekL~km~~iAe~rgd----~~~~f~~-~l~------lgdv~~ 62 (181)
|++-|...|+++-+ .-.|..+|.. .+|.++=.+..+.|-..|. ....+.. .+| .+|.++
T Consensus 68 ~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~ 147 (212)
T 3rjv_A 68 DYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVK 147 (212)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHH
Confidence 45555555555422 2356666665 6666666666666655555 3333322 122 235666
Q ss_pred HHHHHHHc
Q psy2691 63 RIKILKSC 70 (181)
Q Consensus 63 rv~vL~~~ 70 (181)
-+..+.++
T Consensus 148 A~~~~~~A 155 (212)
T 3rjv_A 148 ASEYFKGS 155 (212)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666554
No 143
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=20.50 E-value=1.3e+02 Score=21.49 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHhhCCHHHHHHHHHH
Q psy2691 31 LEKLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKS 69 (181)
Q Consensus 31 ~ekL~km~~iAe~rgd~~~~f~~~l~lgdv~~rv~vL~~ 69 (181)
+..++++.++|+..+|+.++=...+++.+.++.+..|..
T Consensus 105 ~~~~~~~i~~a~~~~D~~T~~ll~~~l~e~ek~~w~l~~ 143 (146)
T 1jig_A 105 IQELKEGMEVAGEAGDATSADMLLAIHTTLEQHVWMLSA 143 (146)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466788888898889988877777888889999888864
No 144
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=20.26 E-value=64 Score=29.11 Aligned_cols=49 Identities=10% Similarity=-0.035 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHhhCCHHHHHHHHHHcCCchHHHHHHH
Q psy2691 33 KLKKMMKIAEIRRDISGQYQAALLLGEVGERIKILKSCGQTSLAYLTAA 81 (181)
Q Consensus 33 kL~km~~iAe~rgd~~~~f~~~l~lgdv~~rv~vL~~~g~~plAyl~Ak 81 (181)
....+....-.+|.+..+-+++-...+....+..|.+.|++..|.-.++
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~ 172 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGAR 172 (449)
T ss_dssp -------------CTTTHHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhhHHHHHHHHHHhccHHHHHHHHH
Confidence 3334444444444444444433333444444444444444444433333
No 145
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=20.22 E-value=2.2e+02 Score=19.64 Aligned_cols=16 Identities=19% Similarity=0.167 Sum_probs=7.1
Q ss_pred HHHHHHhhCCHHHHHH
Q psy2691 21 LAFLYLITGNLEKLKK 36 (181)
Q Consensus 21 LsfLYl~tGn~ekL~k 36 (181)
|..+|...|+.++=.+
T Consensus 50 lg~~~~~~~~~~~A~~ 65 (177)
T 2e2e_A 50 LGEYYLWQNDYSNSLL 65 (177)
T ss_dssp HHHHHHHTTCHHHHHH
T ss_pred HHHHHHHcCCHHHHHH
Confidence 3444444555444333
No 146
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=20.19 E-value=2.6e+02 Score=20.40 Aligned_cols=70 Identities=9% Similarity=0.056 Sum_probs=47.5
Q ss_pred CCccHHHHHHHHHHhc--------CchhHHHHHHhhCCHHHHHHHHHHHHHhch--------hhHHHHHHHhhCCHHHHH
Q psy2691 1 MQGNHQIVEMCYQRTK--------NFDKLAFLYLITGNLEKLKKMMKIAEIRRD--------ISGQYQAALLLGEVGERI 64 (181)
Q Consensus 1 ~qGn~~laE~~yq~~k--------dfd~LsfLYl~tGn~ekL~km~~iAe~rgd--------~~~~f~~~l~lgdv~~rv 64 (181)
.+|+++-|..+|+++- -+-.|..+|...|+.++-.+..+.+....+ +...=.+.+.+|+.++-+
T Consensus 15 ~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~ 94 (272)
T 3u4t_A 15 KNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAI 94 (272)
T ss_dssp TTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHH
Confidence 3688888888888752 344677889999998887777776655331 123334466678888887
Q ss_pred HHHHHc
Q psy2691 65 KILKSC 70 (181)
Q Consensus 65 ~vL~~~ 70 (181)
+.+.++
T Consensus 95 ~~~~~a 100 (272)
T 3u4t_A 95 QQYQAA 100 (272)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 147
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=20.16 E-value=2e+02 Score=18.99 Aligned_cols=74 Identities=26% Similarity=0.222 Sum_probs=47.5
Q ss_pred hhHHHHHHhhCCHHHHHHHHHHHH----HhchhhHHHHHHHhhCCHHHHHHHHHHcC----------CchHHHHHHHhcC
Q psy2691 19 DKLAFLYLITGNLEKLKKMMKIAE----IRRDISGQYQAALLLGEVGERIKILKSCG----------QTSLAYLTAATHG 84 (181)
Q Consensus 19 d~LsfLYl~tGn~ekL~km~~iAe----~rgd~~~~f~~~l~lgdv~~rv~vL~~~g----------~~plAyl~Akt~g 84 (181)
+..++.....|+.+.++.|.+.-. ....-...+|.+...|+. +.+++|.+.| +.|+ ..|..+|
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~d~~g~tpL--~~A~~~~ 84 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQL-EILEFLLLKGADINAPDKHHITPL--LSAVYEG 84 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCH-HHHHHHHTTTCCTTCCCTTSCCHH--HHHHHHT
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCH-HHHHHHHHcCCCCCcCCCCCCCHH--HHHHHcC
Confidence 345666777888888888764211 111234578888888886 5677777754 3444 4555677
Q ss_pred CcHHHHHHHHh
Q psy2691 85 LSEEAAELESN 95 (181)
Q Consensus 85 ~~e~a~~i~~~ 95 (181)
-.+++..+++.
T Consensus 85 ~~~~v~~Ll~~ 95 (123)
T 3aaa_C 85 HVSCVKLLLSK 95 (123)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHc
Confidence 77787777764
No 148
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=20.10 E-value=1.5e+02 Score=20.11 Aligned_cols=16 Identities=13% Similarity=0.260 Sum_probs=7.2
Q ss_pred HHHHHhhCCHHHHHHH
Q psy2691 22 AFLYLITGNLEKLKKM 37 (181)
Q Consensus 22 sfLYl~tGn~ekL~km 37 (181)
+++....|+.+-++.|
T Consensus 16 L~~A~~~~~~~~v~~L 31 (136)
T 1d9s_A 16 LATAAARGQVETVRQL 31 (136)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH
Confidence 3344444444444444
No 149
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=20.10 E-value=2.5e+02 Score=20.25 Aligned_cols=22 Identities=9% Similarity=-0.053 Sum_probs=10.5
Q ss_pred hHHHHHHhhCCHHHHHHHHHHH
Q psy2691 20 KLAFLYLITGNLEKLKKMMKIA 41 (181)
Q Consensus 20 ~LsfLYl~tGn~ekL~km~~iA 41 (181)
.|..+|...|+.++-.+..+.+
T Consensus 110 ~la~~~~~~g~~~~A~~~~~~~ 131 (252)
T 2ho1_A 110 NYGGFLYEQKRYEEAYQRLLEA 131 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHH
Confidence 3444455555555544444433
No 150
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=20.03 E-value=1.7e+02 Score=18.31 Aligned_cols=69 Identities=25% Similarity=0.255 Sum_probs=34.6
Q ss_pred HHHHhhCCHHHHHHHHHHH----HHhchhhHHHHHHHhhCCHHHHHHHHHHcC----------CchHHHHHHHhcCCcHH
Q psy2691 23 FLYLITGNLEKLKKMMKIA----EIRRDISGQYQAALLLGEVGERIKILKSCG----------QTSLAYLTAATHGLSEE 88 (181)
Q Consensus 23 fLYl~tGn~ekL~km~~iA----e~rgd~~~~f~~~l~lgdv~~rv~vL~~~g----------~~plAyl~Akt~g~~e~ 88 (181)
++....|+.+-++.|.+.- ..-.+-...+|.+...|++ +++++|.+.| +.| ...|..+|-.++
T Consensus 7 ~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~~~~~d~~g~t~--l~~A~~~~~~~~ 83 (93)
T 1n0q_A 7 HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL-EVVKLLLEAGADVNAKDKNGRTP--LHLAARNGHLEV 83 (93)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTSCCH--HHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCCCccCCCCCCH--HHHHHHcCCHHH
Confidence 3444556666665554311 0111223456666666665 4566666543 233 334555666666
Q ss_pred HHHHHH
Q psy2691 89 AAELES 94 (181)
Q Consensus 89 a~~i~~ 94 (181)
+..+++
T Consensus 84 ~~~Ll~ 89 (93)
T 1n0q_A 84 VKLLLE 89 (93)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655543
Done!