AmiGO: BLAST Results


BLAST match view associations BLAST with Copa Copa Copa coatomer protein complex subunit alpha	gene from Rattus norvegicus	3.3e-47
BLAST match view associations BLAST with COPA COPA COPA Uncharacterized protein	protein from Sus scrofa	2.6e-46
BLAST match view associations BLAST with alphaCop alphaCop alphaCop alpha-coatomer protein	protein from Drosophila melanogaster	2.7e-46
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Canis lupus familiaris	5.4e-46
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Bos taurus	5.5e-46
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Homo sapiens	5.5e-46
BLAST match view associations BLAST with Copa Copa Copa coatomer protein complex subunit alpha	protein from Mus musculus	1.5e-45
BLAST match view associations BLAST with copa copa copa coatomer protein complex, subunit alpha	gene_product from Danio rerio	4.3e-43
BLAST match view associations BLAST with Y71F9AL.17 Y71F9AL.17 Y71F9AL.17	gene from Caenorhabditis elegans	3.0e-36
BLAST match view associations BLAST with AT2G21390 AT2G21390 AT2G21390	protein from Arabidopsis thaliana	1.7e-27
BLAST match view associations BLAST with LOC100859596 LOC100859596 LOC100859596 Uncharacterized protein	protein from Gallus gallus	2.4e-27
BLAST match view associations BLAST with AT1G62020 AT1G62020 AT1G62020	protein from Arabidopsis thaliana	4.5e-27
BLAST match view associations BLAST with copA copA copA coatomer protein complex alpha subunit	gene from Dictyostelium discoideum	6.1e-25
BLAST match view associations BLAST with orf19.1672 orf19.1672 orf19.1672	gene_product from Candida albicans	2.8e-14
BLAST match view associations BLAST with COP1 COP1 COP1 Alpha subunit of COPI vesicle coatomer complex	gene from Saccharomyces cerevisiae	3.5e-14
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy2691
        (181 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

RGD|1310525 - symbol:Copa "coatomer protein complex subun...   494  3.3e-47   1
UNIPROTKB|F1RJX8 - symbol:COPA "Uncharacterized protein" ...   497  2.6e-46   1
FB|FBgn0025725 - symbol:alphaCop "alpha-coatomer protein"...   497  2.7e-46   1
UNIPROTKB|F1PU93 - symbol:COPA "Coatomer subunit alpha" s...   494  5.4e-46   1
UNIPROTKB|Q27954 - symbol:COPA "Coatomer subunit alpha" s...   494  5.5e-46   1
UNIPROTKB|P53621 - symbol:COPA "Coatomer subunit alpha" s...   494  5.5e-46   1
UNIPROTKB|G3V6T1 - symbol:Copa "Protein Copa" species:101...   494  5.5e-46   1
MGI|MGI:1334462 - symbol:Copa "coatomer protein complex s...   490  1.5e-45   1
ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co...   467  4.3e-43   1
WB|WBGene00022119 - symbol:Y71F9AL.17 species:6239 "Caeno...   403  3.0e-36   1
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p...   322  1.2e-27   1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi...   321  1.7e-27   1
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p...   319  2.4e-27   1
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi...   317  4.5e-27   1
DICTYBASE|DDB_G0267982 - symbol:copA "coatomer protein co...   297  6.1e-25   1
ASPGD|ASPL0000037303 - symbol:copA species:162425 "Emeric...   268  7.4e-22   1
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph...   259  6.8e-21   1
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ...   197  2.8e-14   1
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic...   196  3.5e-14   1


>RGD|1310525 [details] [associations]
            symbol:Copa "coatomer protein complex subunit alpha"
            species:10116 "Rattus norvegicus" [GO:0005615 "extracellular space"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0030126
            "COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
            secretion" evidence=ISO] InterPro:IPR006692 InterPro:IPR010714
            Pfam:PF04053 Pfam:PF06957 RGD:1310525 GO:GO:0006886 GO:GO:0005615
            GO:GO:0016192 GO:GO:0005198 GO:GO:0030157 GO:GO:0030126
            UniGene:Rn.203109 EMBL:BC091312 IPI:IPI00372458 STRING:Q5BJV4
            PRIDE:Q5BJV4 HOVERGEN:HBG068904 InParanoid:Q5BJV4
            ArrayExpress:Q5BJV4 Genevestigator:Q5BJV4 Uniprot:Q5BJV4
        Length = 568

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 96/140 (68%), Positives = 111/140 (79%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEMCYQRTKNFDKL+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:    27 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 86

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPA 119
              ER++ILK+CGQ SLAYLTAATHG             T DP   T+P + P A+LL+PPA
Sbjct:    87 SERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDPNAKLLQPPA 143

Query:   120 PVAEAETNWPLLTVSKSFFE 139
             P+   +TNWPLLTVSK FFE
Sbjct:   144 PIMPLDTNWPLLTVSKGFFE 163


>UNIPROTKB|F1RJX8 [details] [associations]
            symbol:COPA "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
            [GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
            vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
            transport" evidence=IEA] [GO:0006886 "intracellular protein
            transport" evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
            EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
            Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
            Uniprot:F1RJX8
        Length = 1224

 Score = 497 (180.0 bits), Expect = 2.6e-46, P = 2.6e-46
 Identities = 98/141 (69%), Positives = 114/141 (80%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEMCYQRTKNFDKL+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:   683 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLR-TADPNA-TLPTVHPEAQLLRPP 118
              ER++ILK+CGQ SLAYLTAATHG          NL+ T DP   T+P + P A+LL+PP
Sbjct:   743 SERVRILKNCGQKSLAYLTAATHGLDEEAE----NLKETFDPEKETIPDIDPNAKLLQPP 798

Query:   119 APVAEAETNWPLLTVSKSFFE 139
             AP+   +TNWPLLTVSK FFE
Sbjct:   799 APIMPLDTNWPLLTVSKGFFE 819


>FB|FBgn0025725 [details] [associations]
            symbol:alphaCop "alpha-coatomer protein" species:7227
            "Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
            transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
            coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
            evidence=NAS] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
            [GO:0048812 "neuron projection morphogenesis" evidence=IMP]
            [GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
            "cell morphogenesis" evidence=IMP] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
            GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
            PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
            InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
            ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
            PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
            OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
            Uniprot:O77285
        Length = 1234

 Score = 497 (180.0 bits), Expect = 2.7e-46, P = 2.7e-46
 Identities = 96/139 (69%), Positives = 113/139 (81%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQ+VEMCYQRTKNFDKL+FLYLITGNLEKLKKM KIAEIR+D+S QYQ ALLLG+V
Sbjct:   682 LQGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLKKMNKIAEIRKDVSAQYQGALLLGDV 741

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAP 120
              ER+ ILK+CGQ SLAYLTAATHG          ++ T+  N+ LP V+P AQLL+PP P
Sbjct:   742 KERVNILKNCGQLSLAYLTAATHGFDELTESLGESI-TSQGNS-LPEVNPNAQLLQPPVP 799

Query:   121 VAEAETNWPLLTVSKSFFE 139
             + + ETNWPLL+VSK FFE
Sbjct:   800 IQQLETNWPLLSVSKGFFE 818


>UNIPROTKB|F1PU93 [details] [associations]
            symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
            lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0005198
            "structural molecule activity" evidence=IEA] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
            EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
        Length = 1214

 Score = 494 (179.0 bits), Expect = 5.4e-46, P = 5.4e-46
 Identities = 96/140 (68%), Positives = 111/140 (79%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEMCYQRTKNFDKL+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:   673 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 732

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPA 119
              ER++ILK+CGQ SLAYLTAATHG             T DP   T+P + P A+LL+PPA
Sbjct:   733 SERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDPNAKLLQPPA 789

Query:   120 PVAEAETNWPLLTVSKSFFE 139
             P+   +TNWPLLTVSK FFE
Sbjct:   790 PIMPLDTNWPLLTVSKGFFE 809


>UNIPROTKB|Q27954 [details] [associations]
            symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
            taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
            "retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
            [GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
            "intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
            "pancreatic juice secretion" evidence=IEA] [GO:0005615
            "extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
            evidence=IEA] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
            Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
            PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
            GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
            RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
            ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
            Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
            CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
            EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
        Length = 1224

 Score = 494 (179.0 bits), Expect = 5.5e-46, P = 5.5e-46
 Identities = 96/140 (68%), Positives = 111/140 (79%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEMCYQRTKNFDKL+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:   683 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPA 119
              ER++ILK+CGQ SLAYLTAATHG             T DP   T+P + P A+LL+PPA
Sbjct:   743 SERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDPNAKLLQPPA 799

Query:   120 PVAEAETNWPLLTVSKSFFE 139
             P+   +TNWPLLTVSK FFE
Sbjct:   800 PIMPLDTNWPLLTVSKGFFE 819


>UNIPROTKB|P53621 [details] [associations]
            symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
            sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
            vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
            "pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
            evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
            Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
            organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
            vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
            GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
            InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
            Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
            GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
            EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
            IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
            RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
            ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
            MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
            PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
            Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
            UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
            MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
            ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
            CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
            Uniprot:P53621
        Length = 1224

 Score = 494 (179.0 bits), Expect = 5.5e-46, P = 5.5e-46
 Identities = 96/140 (68%), Positives = 111/140 (79%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEMCYQRTKNFDKL+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:   683 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPA 119
              ER++ILK+CGQ SLAYLTAATHG             T DP   T+P + P A+LL+PPA
Sbjct:   743 SERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDPNAKLLQPPA 799

Query:   120 PVAEAETNWPLLTVSKSFFE 139
             P+   +TNWPLLTVSK FFE
Sbjct:   800 PIMPLDTNWPLLTVSKGFFE 819


>UNIPROTKB|G3V6T1 [details] [associations]
            symbol:Copa "Protein Copa" species:10116 "Rattus
            norvegicus" [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
            "COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
            secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
            CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
            RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
            PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
            KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
        Length = 1224

 Score = 494 (179.0 bits), Expect = 5.5e-46, P = 5.5e-46
 Identities = 96/140 (68%), Positives = 111/140 (79%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEMCYQRTKNFDKL+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:   683 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPA 119
              ER++ILK+CGQ SLAYLTAATHG             T DP   T+P + P A+LL+PPA
Sbjct:   743 SERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDPNAKLLQPPA 799

Query:   120 PVAEAETNWPLLTVSKSFFE 139
             P+   +TNWPLLTVSK FFE
Sbjct:   800 PIMPLDTNWPLLTVSKGFFE 819


>MGI|MGI:1334462 [details] [associations]
            symbol:Copa "coatomer protein complex subunit alpha"
            species:10090 "Mus musculus" [GO:0005179 "hormone activity"
            evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
            [GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
            "COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
            secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
            evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
            GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
            InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
            HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
            HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
            EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
            ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
            PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
            Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
            UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
            Genevestigator:Q8CIE6 Uniprot:Q8CIE6
        Length = 1224

 Score = 490 (177.5 bits), Expect = 1.5e-45, P = 1.5e-45
 Identities = 95/140 (67%), Positives = 111/140 (79%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEMCYQRTKNFDKL+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:   683 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHPEAQLLRPPA 119
              ER++ILK+CGQ SLAYL+AATHG             T DP   T+P + P A+LL+PPA
Sbjct:   743 SERVRILKNCGQKSLAYLSAATHGLDEEAESLK---ETFDPEKETIPDIDPNAKLLQPPA 799

Query:   120 PVAEAETNWPLLTVSKSFFE 139
             P+   +TNWPLLTVSK FFE
Sbjct:   800 PIMPLDTNWPLLTVSKGFFE 819


>ZFIN|ZDB-GENE-020905-2 [details] [associations]
            symbol:copa "coatomer protein complex, subunit alpha"
            species:7955 "Danio rerio" [GO:0030117 "membrane coat"
            evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0030903 "notochord development" evidence=IMP]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
            Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
            ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
            Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
            PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
            UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
            InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
            Uniprot:Q6JWU9
        Length = 1226

 Score = 467 (169.5 bits), Expect = 4.3e-43, P = 4.3e-43
 Identities = 92/140 (65%), Positives = 106/140 (75%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QG+HQ+VEMCYQRTKNFDKL FLYLITGNL KL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:   685 LQGHHQVVEMCYQRTKNFDKLTFLYLITGNLTKLRKMMKIAEIRKDMSGHYQGALYLGDV 744

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTAD-PNATLPTVHPEAQLLRPPA 119
              ER++ILK+CGQ SLAYLTAATHG             T D     +P V P AQLL+PP 
Sbjct:   745 SERVRILKNCGQKSLAYLTAATHGMDEEAEALK---ETFDLEKEMVPEVDPNAQLLQPPP 801

Query:   120 PVAEAETNWPLLTVSKSFFE 139
             P+   +TNWPLLTVSK FFE
Sbjct:   802 PINPLDTNWPLLTVSKGFFE 821


>WB|WBGene00022119 [details] [associations]
            symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
            [GO:0005198 "structural molecule activity" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
            "membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
            larval development" evidence=IMP] [GO:0032940 "secretion by cell"
            evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
            GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
            GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
            InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
            GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
            KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
            RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
            DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
            PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
            KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
            WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
        Length = 1232

 Score = 403 (146.9 bits), Expect = 3.0e-36, P = 3.0e-36
 Identities = 78/140 (55%), Positives = 96/140 (68%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEM YQRTKNF+KL+FLY +TGN +KL KMMKIA+ R D  G +Q AL  G+V
Sbjct:   687 LQGNHQIVEMSYQRTKNFEKLSFLYFVTGNTDKLVKMMKIAQARNDAHGHFQTALYTGDV 746

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAP 120
              ER+K+L++CGQTSLAYL AATHG           L +      +P V P A+LL PP P
Sbjct:   747 EERVKVLRNCGQTSLAYLAAATHGYSAEAEELKAELESRQQ--PIPPVDPNARLLVPPPP 804

Query:   121 VAEAETNWPLLTVSKSFFEA 140
             VA  E NWPLL  ++  F+A
Sbjct:   805 VARLEENWPLLASARGTFDA 824


>UNIPROTKB|H9KZL3 [details] [associations]
            symbol:LOC100859596 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
            [GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
            "pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
            Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
        Length = 1169

 Score = 322 (118.4 bits), Expect = 1.2e-27, P = 1.2e-27
 Identities = 63/102 (61%), Positives = 79/102 (77%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEMCYQRTKNFD+L+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:   683 LQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742

Query:    61 GERIKILKSCGQTS--LAYLTAATHGXXXXXXXXXXNLRTAD 100
              ER++IL++CGQ++  L  L+ A  G           ++ AD
Sbjct:   743 AERVRILRNCGQSNSELTCLSLALEGEFCEMTTNEKEVKLAD 784


>TAIR|locus:2050064 [details] [associations]
            symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
            [GO:0005198 "structural molecule activity" evidence=IEA]
            [GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
            Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
            "vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
            coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
            evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
            "Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
            "cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
            organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
            formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
            evidence=RCA] [GO:0051788 "response to misfolded protein"
            evidence=RCA] [GO:0080129 "proteasome core complex assembly"
            evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
            Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
            PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
            HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
            InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
            PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
            ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
            PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
            KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
            OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
        Length = 1218

 Score = 321 (118.1 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 67/138 (48%), Positives = 90/138 (65%)

Query:     2 QGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVG 61
             QGN +IVE  YQ+TKNF++L+FLYLITGNL+KL K+MKIAE++ ++ GQ+  AL LG+V 
Sbjct:   686 QGNSRIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFHNALYLGDVK 745

Query:    62 ERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPV 121
             ER+KIL++ G   LAY+TA+ HG           L   D   +LP     + LL PP+P+
Sbjct:   746 ERVKILENAGHLPLAYITASVHGLTDIAERLAIEL--GDNVPSLPEGKTPS-LLMPPSPI 802

Query:   122 AEAETNWPLLTVSKSFFE 139
                  +WPLL V K  FE
Sbjct:   803 M-CGGDWPLLRVMKGIFE 819


>UNIPROTKB|H9L3L2 [details] [associations]
            symbol:LOC100859596 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
            Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
            GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
            PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
            Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
        Length = 1134

 Score = 319 (117.4 bits), Expect = 2.4e-27, P = 2.4e-27
 Identities = 58/77 (75%), Positives = 70/77 (90%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGNHQIVEMCYQRTKNFD+L+FLYLITGNLEKL+KMMKIAEIR+D+SG YQ AL LG+V
Sbjct:   683 LQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742

Query:    61 GERIKILKSCGQTSLAY 77
              ER++IL++CGQ +  Y
Sbjct:   743 AERVRILRNCGQNNKGY 759


>TAIR|locus:2036823 [details] [associations]
            symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
            [GO:0005198 "structural molecule activity" evidence=IEA]
            [GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
            "intracellular" evidence=IEA] [GO:0006886 "intracellular protein
            transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
            transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
            evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
            evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
            "gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
            process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
            evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
            PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
            EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
            UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
            STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
            GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
            HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
            PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
            InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
        Length = 1216

 Score = 317 (116.6 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 67/138 (48%), Positives = 88/138 (63%)

Query:     2 QGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVG 61
             QGN  IVE  YQ+TKNF++L+FLYLITGNL+KL K+MKIAE++ ++ GQ+  AL LG+V 
Sbjct:   686 QGNSGIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFHNALYLGDVK 745

Query:    62 ERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPV 121
             ER+KIL++ G   LAY+TA+ HG           L   D   +LP     + LL PP P+
Sbjct:   746 ERVKILENAGHLPLAYITASVHGLNDIAERLATEL--GDNVPSLPEGKTPS-LLMPPTPI 802

Query:   122 AEAETNWPLLTVSKSFFE 139
                  +WPLL V K  FE
Sbjct:   803 M-CGGDWPLLRVMKGIFE 819


>DICTYBASE|DDB_G0267982 [details] [associations]
            symbol:copA "coatomer protein complex alpha subunit"
            species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
            coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0005198
            "structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
            "Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
            evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
            InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
            Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
            PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
            GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
            SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
            eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
            GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
            PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
            STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
            KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
            Uniprot:Q55FR9
        Length = 1221

 Score = 297 (109.6 bits), Expect = 6.1e-25, P = 6.1e-25
 Identities = 64/137 (46%), Positives = 85/137 (62%)

Query:     2 QGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVG 61
             QGN+Q+VEM Y RT  FD+L+FLYL+ GNL  LKKM+       DI  ++  +L LG+V 
Sbjct:   676 QGNYQVVEMAYSRTSEFDRLSFLYLLVGNLSTLKKMISYES--SDIMSRFHFSLYLGDVE 733

Query:    62 ERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPV 121
             ERIKIL+  G   LAY+TA+ HG          NL T+D  + LP +  ++ LL PP+P+
Sbjct:   734 ERIKILQEAGLHQLAYITASIHGLTEKAESIG-NLITSDGKSQLPQLPKQSYLLVPPSPI 792

Query:   122 A--EAETNWPLLTVSKS 136
                  E NWPLLT +KS
Sbjct:   793 NCNPNELNWPLLTTTKS 809


>ASPGD|ASPL0000037303 [details] [associations]
            symbol:copA species:162425 "Emericella nidulans"
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
            tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
            [GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
            "structural molecule activity" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
            vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
            evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
            Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
            GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
            InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
            EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
            InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
            ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
            Uniprot:C8VIU7
        Length = 1205

 Score = 268 (99.4 bits), Expect = 7.4e-22, P = 7.4e-22
 Identities = 57/137 (41%), Positives = 81/137 (59%)

Query:     3 GNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGE 62
             GNHQIVEM YQ+ +NFDKL+FLYL  G+ EKL +M KIAE R D + ++Q A+  G+V +
Sbjct:   691 GNHQIVEMAYQKQRNFDKLSFLYLSIGDQEKLSRMAKIAEHRGDFTSRFQNAIYRGDVED 750

Query:    63 RIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVA 122
             RI++ K      LAYLTA  HG           +  ++   +LPT+    Q+ +P   VA
Sbjct:   751 RIQMFKEVDLYPLAYLTAKAHGLTEEAESILEVVGLSEDQVSLPTIEAPPQIPQPI--VA 808

Query:   123 EAETNWPLLTVSKSFFE 139
               + +WP+   + S FE
Sbjct:   809 TYKASWPVKAAAHSSFE 825


>POMBASE|SPBPJ4664.04 [details] [associations]
            symbol:SPBPJ4664.04 "coatomer alpha subunit
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0006886 "intracellular protein transport" evidence=IC]
            [GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
            [GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
            evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
            Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
            PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
            SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
            EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
            GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
            HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
            PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
            STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
            KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
            Uniprot:Q96WV5
        Length = 1207

 Score = 259 (96.2 bits), Expect = 6.8e-21, P = 6.8e-21
 Identities = 59/138 (42%), Positives = 77/138 (55%)

Query:     3 GNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVGE 62
             GNH+I E+ +Q+ + F+KL+FLYLITGN EKL+KM  IAE R D    +Q +L L EV  
Sbjct:   692 GNHKIAEITFQKLRYFEKLSFLYLITGNAEKLQKMAIIAEKRNDTLSLFQNSLYLNEVES 751

Query:    63 RIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVA 122
             RI IL+  G   +AYLTA ++G          +    +    LP++         P PV 
Sbjct:   752 RINILEQAGMYPIAYLTAKSNGLEEKAQQILSHCNKTEEEIKLPSL---GSAFTTPVPVN 808

Query:   123 EAET-NWPLLTVSKSFFE 139
             E  T NWPLL  S S FE
Sbjct:   809 ETYTHNWPLLDTSHSTFE 826


>CGD|CAL0000105 [details] [associations]
            symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
            "COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
            evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
            Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
            InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
            InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
            PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
            GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
            PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
            InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
            ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
            KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
        Length = 1221

 Score = 197 (74.4 bits), Expect = 2.8e-14, P = 2.8e-14
 Identities = 48/139 (34%), Positives = 69/139 (49%)

Query:     1 MQGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEV 60
             +QGN +IVE  YQ+  +FDKL+FLYL  G+ E+L KM  IA+ R D S   Q  L   ++
Sbjct:   694 LQGNIEIVEYIYQQLHHFDKLSFLYLYKGDDERLDKMSTIAQHRDDTSSLVQNTLYNNDI 753

Query:    61 GERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAP 120
              +R ++    G   LAY  A ++G              ++ +  LP +     L   P P
Sbjct:   754 KKRCQVYIQNGMLPLAYTLAKSNGLNELAEQILQEANISEKDVELPELGDVVPL---PKP 810

Query:   121 VAEAETNWPLLTVSKSFFE 139
             + E   NWPL     S+FE
Sbjct:   811 IGEPVGNWPLKDSELSYFE 829


>SGD|S000002304 [details] [associations]
            symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
            species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
            coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
            "cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
            vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
            evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
            "structural molecule activity" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0030117
            "membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
            evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
            evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
            InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
            InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
            Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
            SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
            PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
            InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
            GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
            HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
            GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
            EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
            PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
            ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
            MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
            EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
            OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
            Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
        Length = 1201

 Score = 196 (74.1 bits), Expect = 3.5e-14, P = 3.5e-14
 Identities = 44/138 (31%), Positives = 61/138 (44%)

Query:     2 QGNHQIVEMCYQRTKNFDKLAFLYLITGNLEKLKKMMKIAEIRRDISGQYQAALLLGEVG 61
             QGN  + EM YQ   +FDKL+FLYL+TG++ KL KM  IA+ R D               
Sbjct:   688 QGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTK 747

Query:    62 ERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPV 121
             ER  I    G   LAY  A  +G               + + TLP     +  ++ P  +
Sbjct:   748 ERSSIFAEGGSLPLAYAVAKANGDEAAASAFLEQAEVDEQDVTLPDQMDASNFVQRPV-I 806

Query:   122 AEAETNWPLLTVSKSFFE 139
             ++    WPL     S+FE
Sbjct:   807 SKPLEKWPLKEAELSYFE 824


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      181       136   0.00091  102 3  11 22  0.41    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  19
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  125 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  13.13u 0.07s 13.20t   Elapsed:  00:00:18
  Total cpu time:  13.13u 0.07s 13.20t   Elapsed:  00:00:27
  Start:  Thu Aug 15 14:19:23 2013   End:  Thu Aug 15 14:19:50 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with Copa Copa Copa coatomer protein complex subunit alpha	gene from Rattus norvegicus	3.3e-47
BLAST match view associations BLAST with COPA COPA COPA Uncharacterized protein	protein from Sus scrofa	2.6e-46
BLAST match view associations BLAST with alphaCop alphaCop alphaCop alpha-coatomer protein	protein from Drosophila melanogaster	2.7e-46
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Canis lupus familiaris	5.4e-46
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Bos taurus	5.5e-46
BLAST match view associations BLAST with COPA COPA COPA Coatomer subunit alpha	protein from Homo sapiens	5.5e-46
BLAST match view associations BLAST with Copa Copa Copa coatomer protein complex subunit alpha	protein from Mus musculus	1.5e-45
BLAST match view associations BLAST with copa copa copa coatomer protein complex, subunit alpha	gene_product from Danio rerio	4.3e-43
BLAST match view associations BLAST with Y71F9AL.17 Y71F9AL.17 Y71F9AL.17	gene from Caenorhabditis elegans	3.0e-36
BLAST match view associations BLAST with AT2G21390 AT2G21390 AT2G21390	protein from Arabidopsis thaliana	1.7e-27
BLAST match view associations BLAST with LOC100859596 LOC100859596 LOC100859596 Uncharacterized protein	protein from Gallus gallus	2.4e-27
BLAST match view associations BLAST with AT1G62020 AT1G62020 AT1G62020	protein from Arabidopsis thaliana	4.5e-27
BLAST match view associations BLAST with copA copA copA coatomer protein complex alpha subunit	gene from Dictyostelium discoideum	6.1e-25
BLAST match view associations BLAST with orf19.1672 orf19.1672 orf19.1672	gene_product from Candida albicans	2.8e-14
BLAST match view associations BLAST with COP1 COP1 COP1 Alpha subunit of COPI vesicle coatomer complex	gene from Saccharomyces cerevisiae	3.5e-14