Query psy2692
Match_columns 133
No_of_seqs 105 out of 168
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 22:46:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkr_B Coatomer subunit alpha; 100.0 1.9E-48 6.6E-53 323.1 14.7 126 7-132 22-159 (320)
2 3mv2_A Coatomer subunit alpha; 100.0 3.2E-48 1.1E-52 322.1 13.7 125 7-132 34-171 (325)
3 2xev_A YBGF; tetratricopeptide 88.9 1.5 5E-05 27.8 6.3 95 8-106 9-107 (129)
4 4a5x_A MITD1, MIT domain-conta 87.9 1.2 4.1E-05 29.6 5.5 54 76-130 17-70 (86)
5 3ma5_A Tetratricopeptide repea 86.1 4.6 0.00016 25.3 8.0 46 79-126 45-90 (100)
6 2cpt_A SKD1 protein, vacuolar 85.5 1.6 5.5E-05 30.6 5.3 58 73-130 16-73 (117)
7 3gyz_A Chaperone protein IPGC; 84.6 7 0.00024 27.2 8.4 42 78-124 107-148 (151)
8 4gco_A Protein STI-1; structur 84.1 1.9 6.5E-05 28.6 5.0 33 75-107 13-45 (126)
9 1wfd_A Hypothetical protein 15 81.6 4.5 0.00015 27.0 6.1 56 74-130 14-69 (93)
10 2v6x_A Vacuolar protein sortin 80.7 3.8 0.00013 26.6 5.4 58 72-130 10-67 (85)
11 3gyz_A Chaperone protein IPGC; 79.0 3.4 0.00012 28.8 5.0 38 70-107 31-68 (151)
12 2l6j_A TPR repeat-containing p 78.9 3 0.0001 25.4 4.2 29 78-106 7-35 (111)
13 2fbn_A 70 kDa peptidylprolyl i 78.8 3.7 0.00013 28.5 5.1 31 78-108 41-71 (198)
14 2hr2_A Hypothetical protein; a 78.3 2.6 9E-05 30.9 4.3 31 77-107 13-43 (159)
15 3qky_A Outer membrane assembly 78.0 2.8 9.4E-05 30.4 4.4 95 9-107 23-129 (261)
16 2xcb_A PCRH, regulatory protei 76.9 4.6 0.00016 26.6 5.0 36 71-106 14-49 (142)
17 2qx5_A Nucleoporin NIC96; mRNA 76.4 2.3 7.7E-05 38.0 4.1 32 76-108 539-570 (661)
18 2kc7_A BFR218_protein; tetratr 74.4 3.2 0.00011 25.3 3.4 29 79-107 4-32 (99)
19 4gcn_A Protein STI-1; structur 73.4 3.2 0.00011 27.4 3.4 29 79-107 12-40 (127)
20 3upv_A Heat shock protein STI1 72.9 6.1 0.00021 25.1 4.6 29 78-106 7-35 (126)
21 3rkv_A Putative peptidylprolyl 72.4 4.6 0.00016 27.0 4.1 36 73-108 9-44 (162)
22 3urz_A Uncharacterized protein 72.3 3.4 0.00011 29.4 3.5 32 75-106 4-35 (208)
23 2dba_A Smooth muscle cell asso 71.4 6.5 0.00022 24.9 4.5 94 9-106 36-130 (148)
24 3nf1_A KLC 1, kinesin light ch 71.0 25 0.00086 24.9 9.4 32 75-106 278-309 (311)
25 2xev_A YBGF; tetratricopeptide 70.2 5.2 0.00018 25.1 3.8 28 79-106 6-33 (129)
26 2vkj_A TM1634; membrane protei 69.8 24 0.00084 24.3 7.5 52 75-132 53-105 (106)
27 2vgx_A Chaperone SYCD; alterna 69.2 8.7 0.0003 25.9 5.0 35 72-106 18-52 (148)
28 1ihg_A Cyclophilin 40; ppiase 69.0 7.6 0.00026 30.9 5.3 99 8-107 230-339 (370)
29 2w2u_A Hypothetical P60 katani 67.9 6.6 0.00023 25.8 3.9 54 76-130 20-73 (83)
30 3k9i_A BH0479 protein; putativ 67.9 11 0.00036 23.9 4.9 29 78-106 64-92 (117)
31 1elw_A TPR1-domain of HOP; HOP 67.1 8.2 0.00028 23.1 4.1 29 78-106 7-35 (118)
32 2v6y_A AAA family ATPase, P60 66.9 7.4 0.00025 25.4 4.0 54 76-130 12-65 (83)
33 2xpi_A Anaphase-promoting comp 63.6 19 0.00065 28.8 6.6 33 75-107 200-232 (597)
34 1hxi_A PEX5, peroxisome target 62.5 8 0.00027 25.2 3.6 29 78-106 20-48 (121)
35 3sz7_A HSC70 cochaperone (SGT) 61.5 13 0.00044 24.8 4.6 32 75-106 11-42 (164)
36 4b4t_Q 26S proteasome regulato 61.3 6.3 0.00022 30.3 3.3 31 77-107 6-36 (434)
37 3q49_B STIP1 homology and U bo 60.9 9.2 0.00031 24.2 3.6 31 77-107 11-41 (137)
38 2crb_A Nuclear receptor bindin 60.3 11 0.00037 26.0 3.9 56 71-130 13-68 (97)
39 3ma5_A Tetratricopeptide repea 59.9 11 0.00037 23.5 3.8 30 78-107 10-39 (100)
40 3vtx_A MAMA; tetratricopeptide 59.8 8.3 0.00028 25.9 3.4 28 79-106 9-36 (184)
41 2xcb_A PCRH, regulatory protei 59.7 29 0.001 22.5 6.1 29 79-107 90-118 (142)
42 3upv_A Heat shock protein STI1 59.1 17 0.00057 22.9 4.6 49 78-128 75-123 (126)
43 3qou_A Protein YBBN; thioredox 59.1 4.6 0.00016 30.4 2.1 31 77-107 221-251 (287)
44 1na3_A Designed protein CTPR2; 58.8 19 0.00066 20.7 4.6 28 79-106 13-40 (91)
45 2hr2_A Hypothetical protein; a 58.6 17 0.00057 26.5 5.0 46 79-125 106-151 (159)
46 3qky_A Outer membrane assembly 58.4 8.9 0.0003 27.6 3.5 33 75-107 15-47 (261)
47 3rkv_A Putative peptidylprolyl 58.2 19 0.00065 23.9 5.0 30 78-107 100-129 (162)
48 3k9i_A BH0479 protein; putativ 58.1 18 0.0006 22.8 4.6 32 76-107 28-59 (117)
49 1kt0_A FKBP51, 51 kDa FK506-bi 58.0 41 0.0014 27.2 7.8 32 78-109 271-302 (457)
50 2lni_A Stress-induced-phosphop 58.0 16 0.00055 22.4 4.3 31 75-105 16-46 (133)
51 2fbn_A 70 kDa peptidylprolyl i 58.0 24 0.00083 24.2 5.7 30 78-107 125-154 (198)
52 3bee_A Putative YFRE protein; 57.3 8.5 0.00029 24.8 2.9 31 77-107 45-75 (93)
53 1p5q_A FKBP52, FK506-binding p 56.8 44 0.0015 25.7 7.5 32 78-109 150-181 (336)
54 2yhc_A BAMD, UPF0169 lipoprote 56.3 12 0.00041 26.6 3.9 27 80-106 9-35 (225)
55 2r5s_A Uncharacterized protein 55.8 43 0.0015 22.5 6.6 30 78-107 111-140 (176)
56 2dba_A Smooth muscle cell asso 55.5 14 0.00047 23.3 3.7 33 74-106 27-59 (148)
57 4i17_A Hypothetical protein; T 54.8 41 0.0014 23.3 6.5 93 9-107 15-108 (228)
58 4gcn_A Protein STI-1; structur 53.9 30 0.001 22.4 5.4 38 79-121 87-124 (127)
59 2vyi_A SGTA protein; chaperone 53.8 24 0.00083 21.2 4.6 29 78-106 15-43 (131)
60 1elr_A TPR2A-domain of HOP; HO 53.8 28 0.00095 21.0 4.9 29 78-106 82-110 (131)
61 1elr_A TPR2A-domain of HOP; HO 53.1 25 0.00086 21.2 4.6 26 80-105 9-34 (131)
62 1na3_A Designed protein CTPR2; 53.0 17 0.00057 21.0 3.6 28 79-106 47-74 (91)
63 2kck_A TPR repeat; tetratricop 52.2 14 0.00048 21.8 3.2 27 80-106 11-37 (112)
64 1hh8_A P67PHOX, NCF-2, neutrop 52.1 46 0.0016 22.5 6.3 33 75-107 121-153 (213)
65 3ieg_A DNAJ homolog subfamily 51.9 17 0.00057 26.4 4.1 31 76-106 4-34 (359)
66 3edt_B KLC 2, kinesin light ch 50.5 59 0.002 22.4 9.0 31 74-104 251-281 (283)
67 1a17_A Serine/threonine protei 50.4 28 0.00096 22.2 4.7 29 78-106 16-44 (166)
68 3uq3_A Heat shock protein STI1 49.8 37 0.0013 23.2 5.5 21 10-30 88-108 (258)
69 2kc7_A BFR218_protein; tetratr 49.3 18 0.00061 21.7 3.4 60 9-107 8-67 (99)
70 2vgx_A Chaperone SYCD; alterna 48.8 36 0.0012 22.7 5.2 29 79-107 93-121 (148)
71 3u4t_A TPR repeat-containing p 48.8 16 0.00056 25.7 3.5 30 78-107 6-35 (272)
72 3qwp_A SET and MYND domain-con 48.6 53 0.0018 26.9 7.1 58 71-128 367-424 (429)
73 2l6j_A TPR repeat-containing p 48.6 15 0.00051 22.1 2.9 29 79-107 42-70 (111)
74 4i17_A Hypothetical protein; T 48.5 21 0.00073 24.8 4.1 30 77-106 9-38 (228)
75 3n71_A Histone lysine methyltr 47.5 53 0.0018 27.5 7.0 57 71-127 389-445 (490)
76 3as5_A MAMA; tetratricopeptide 47.3 40 0.0014 21.6 5.1 25 82-106 117-141 (186)
77 4gco_A Protein STI-1; structur 46.8 21 0.0007 23.3 3.6 90 10-106 22-112 (126)
78 1p5q_A FKBP52, FK506-binding p 45.9 32 0.0011 26.4 5.1 30 78-107 233-262 (336)
79 1xnf_A Lipoprotein NLPI; TPR, 45.7 44 0.0015 23.3 5.4 28 80-107 116-143 (275)
80 3mkr_A Coatomer subunit epsilo 45.6 49 0.0017 24.8 6.0 27 80-106 205-231 (291)
81 2k0m_A Uncharacterized protein 44.9 42 0.0014 23.0 5.0 36 89-124 15-50 (104)
82 3ro2_A PINS homolog, G-protein 44.7 78 0.0027 22.2 6.9 31 76-106 6-36 (338)
83 2c2l_A CHIP, carboxy terminus 44.0 21 0.00071 26.6 3.6 92 8-106 11-103 (281)
84 3mkr_A Coatomer subunit epsilo 43.6 79 0.0027 23.6 6.9 21 87-107 178-198 (291)
85 2xa6_A KH domain-containing\,R 43.4 8.6 0.00029 22.5 1.0 18 12-29 19-36 (41)
86 2r5s_A Uncharacterized protein 43.1 5.4 0.00018 27.3 0.1 27 80-106 45-71 (176)
87 2y4t_A DNAJ homolog subfamily 42.8 30 0.001 26.3 4.4 36 71-106 22-57 (450)
88 2gw1_A Mitochondrial precursor 42.5 33 0.0011 26.4 4.7 31 76-106 7-37 (514)
89 2yhc_A BAMD, UPF0169 lipoprote 41.1 40 0.0014 23.7 4.6 62 9-107 12-73 (225)
90 3u4t_A TPR repeat-containing p 40.1 91 0.0031 21.6 7.0 24 8-31 10-33 (272)
91 2kat_A Uncharacterized protein 39.7 64 0.0022 19.7 5.6 43 80-124 58-100 (115)
92 3vx8_B Autophagy-related prote 39.6 6.9 0.00023 31.8 0.3 13 5-17 11-23 (292)
93 1na0_A Designed protein CTPR3; 39.4 35 0.0012 20.3 3.6 28 79-106 13-40 (125)
94 3hym_B Cell division cycle pro 38.7 29 0.001 24.8 3.6 31 78-108 25-55 (330)
95 3vtx_A MAMA; tetratricopeptide 38.7 32 0.0011 22.9 3.6 29 79-107 111-139 (184)
96 2if4_A ATFKBP42; FKBP-like, al 38.6 37 0.0013 26.1 4.4 31 78-108 182-212 (338)
97 3q49_B STIP1 homology and U bo 38.5 69 0.0024 19.8 5.7 31 78-108 80-110 (137)
98 2gw1_A Mitochondrial precursor 38.5 35 0.0012 26.3 4.2 31 78-108 76-106 (514)
99 3ax2_A Mitochondrial import re 38.4 50 0.0017 21.2 4.3 31 76-106 18-48 (73)
100 3qou_A Protein YBBN; thioredox 38.1 35 0.0012 25.4 4.1 29 78-106 120-148 (287)
101 2nzc_A Hypothetical protein; s 37.9 12 0.00041 25.1 1.2 27 106-132 10-37 (86)
102 1hxi_A PEX5, peroxisome target 37.0 36 0.0012 21.8 3.6 29 79-107 55-83 (121)
103 3mzk_B Protein transport prote 36.9 68 0.0023 27.1 6.1 37 72-108 352-389 (441)
104 1hh8_A P67PHOX, NCF-2, neutrop 36.8 22 0.00076 24.2 2.6 28 79-106 41-68 (213)
105 1fch_A Peroxisomal targeting s 36.7 74 0.0025 23.3 5.6 28 80-107 137-164 (368)
106 2q7f_A YRRB protein; TPR, prot 36.5 98 0.0033 20.9 6.4 24 82-105 166-189 (243)
107 3ieg_A DNAJ homolog subfamily 36.5 53 0.0018 23.6 4.7 30 78-107 237-266 (359)
108 3u3w_A Transcriptional activat 36.2 1.2E+02 0.0042 22.0 7.8 95 9-105 83-185 (293)
109 4eqf_A PEX5-related protein; a 36.0 70 0.0024 23.6 5.5 30 78-107 136-165 (365)
110 2pl2_A Hypothetical conserved 35.7 28 0.00096 24.6 3.1 28 79-106 9-36 (217)
111 1wk1_A Hypothetical protein YK 35.2 20 0.00069 24.3 2.1 41 82-124 7-51 (150)
112 2vq2_A PILW, putative fimbrial 35.0 61 0.0021 21.5 4.6 28 79-106 12-39 (225)
113 3sz7_A HSC70 cochaperone (SGT) 34.9 37 0.0013 22.4 3.4 31 78-108 82-112 (164)
114 3cv0_A Peroxisome targeting si 34.6 37 0.0013 24.2 3.6 29 78-106 24-52 (327)
115 3dt5_A Uncharacterized protein 34.2 34 0.0011 23.9 3.1 40 92-132 20-59 (135)
116 4ga2_A E3 SUMO-protein ligase 34.1 42 0.0014 22.3 3.6 25 82-106 72-96 (150)
117 3uq3_A Heat shock protein STI1 33.5 69 0.0024 21.8 4.8 24 80-103 10-33 (258)
118 3ulq_A Response regulator aspa 33.5 1.5E+02 0.0052 22.2 7.3 38 71-108 8-45 (383)
119 4a1s_A PINS, partner of inscut 33.4 1.5E+02 0.0051 22.1 7.9 35 72-106 45-79 (411)
120 2dyt_A Autophagy-related prote 33.4 9.9 0.00034 31.2 0.3 13 5-17 29-41 (312)
121 2c2l_A CHIP, carboxy terminus 33.4 47 0.0016 24.6 4.1 29 78-106 7-35 (281)
122 3mv2_B Coatomer subunit epsilo 33.3 19 0.00065 28.9 2.0 90 10-106 109-209 (310)
123 2v5f_A Prolyl 4-hydroxylase su 33.2 47 0.0016 21.0 3.6 29 79-107 50-78 (104)
124 1ihg_A Cyclophilin 40; ppiase 32.9 50 0.0017 26.1 4.4 30 78-107 226-255 (370)
125 1w3b_A UDP-N-acetylglucosamine 32.8 21 0.00073 26.9 2.1 27 80-106 4-30 (388)
126 1egg_A Macrophage mannose rece 32.5 16 0.00056 24.2 1.3 36 88-125 29-64 (147)
127 2fo7_A Synthetic consensus TPR 32.0 48 0.0016 19.7 3.4 23 82-104 8-30 (136)
128 4a1s_A PINS, partner of inscut 32.0 77 0.0026 23.7 5.2 30 78-107 129-158 (411)
129 1a17_A Serine/threonine protei 31.8 50 0.0017 21.0 3.6 29 78-106 84-112 (166)
130 3hme_A Bromodomain-containing 31.7 1.2E+02 0.0041 20.5 8.0 93 33-130 11-110 (123)
131 4eqf_A PEX5-related protein; a 31.6 39 0.0013 25.1 3.4 29 78-106 68-96 (365)
132 1kt0_A FKBP51, 51 kDa FK506-bi 31.5 36 0.0012 27.5 3.4 29 78-106 354-382 (457)
133 1om2_A Protein (mitochondrial 30.6 71 0.0024 21.6 4.2 32 75-106 20-51 (95)
134 2e2e_A Formate-dependent nitri 30.5 81 0.0028 20.7 4.6 30 78-107 118-147 (177)
135 3ulq_A Response regulator aspa 30.4 1.7E+02 0.0059 21.9 7.3 37 81-119 109-145 (383)
136 2ho1_A Type 4 fimbrial biogene 30.3 1.3E+02 0.0045 20.5 7.6 19 10-28 80-98 (252)
137 4ga2_A E3 SUMO-protein ligase 29.3 44 0.0015 22.1 3.1 18 11-28 41-58 (150)
138 2vsy_A XCC0866; transferase, g 28.9 1.3E+02 0.0046 24.3 6.4 28 79-106 95-122 (568)
139 3urz_A Uncharacterized protein 28.9 51 0.0017 23.0 3.4 30 78-107 91-120 (208)
140 2e2e_A Formate-dependent nitri 28.5 55 0.0019 21.6 3.4 27 80-106 49-75 (177)
141 1wao_1 Serine/threonine protei 28.3 1.1E+02 0.0039 24.8 5.9 30 78-107 77-106 (477)
142 2ymb_A MITD1, MIT domain-conta 28.2 12 0.00042 29.7 0.0 56 74-130 22-77 (257)
143 3qww_A SET and MYND domain-con 27.7 1.5E+02 0.005 24.3 6.5 53 71-123 378-430 (433)
144 3ubu_B Agglucetin subunit beta 27.3 63 0.0022 20.6 3.5 38 88-125 22-59 (126)
145 4b4t_Q 26S proteasome regulato 27.0 2E+02 0.0069 21.6 8.5 28 80-107 60-87 (434)
146 1bb1_A Designed, thermostable 26.7 61 0.0021 17.9 2.7 20 113-132 15-34 (36)
147 1tn3_A Tetranectin; plasminoge 26.0 79 0.0027 20.4 3.8 41 83-125 17-58 (137)
148 4f3v_A ESX-1 secretion system 25.7 2.4E+02 0.0081 22.0 7.4 82 8-102 109-198 (282)
149 2msb_A Mannose-binding protein 25.5 78 0.0027 20.1 3.7 40 83-124 6-46 (115)
150 2pl2_A Hypothetical conserved 25.5 65 0.0022 22.6 3.5 27 80-106 156-182 (217)
151 2y4t_A DNAJ homolog subfamily 25.3 90 0.0031 23.6 4.5 29 79-107 261-289 (450)
152 3sf4_A G-protein-signaling mod 25.2 2E+02 0.0069 21.0 7.2 31 76-106 10-40 (406)
153 1h8u_A MBP, eosinophil granule 24.9 90 0.0031 19.7 3.9 41 83-124 4-45 (117)
154 2ifu_A Gamma-SNAP; membrane fu 24.8 1.2E+02 0.0039 22.5 5.0 30 78-108 198-227 (307)
155 3rau_A Tyrosine-protein phosph 24.0 1E+02 0.0035 24.9 4.8 56 50-106 2-58 (363)
156 1jzn_A Galactose-specific lect 24.0 67 0.0023 20.7 3.2 43 83-125 15-58 (135)
157 2e2a_A Protein (enzyme IIA); h 23.8 55 0.0019 22.4 2.7 20 8-27 27-46 (105)
158 1xnf_A Lipoprotein NLPI; TPR, 23.4 1.2E+02 0.0042 20.9 4.6 29 79-107 81-109 (275)
159 1fch_A Peroxisomal targeting s 23.4 61 0.0021 23.7 3.1 28 79-106 68-95 (368)
160 1dv8_A Asialoglycoprotein rece 23.3 89 0.0031 20.0 3.7 34 88-123 19-52 (128)
161 3ro3_A PINS homolog, G-protein 23.3 1.3E+02 0.0046 18.3 5.5 30 78-107 12-41 (164)
162 1wcr_A PTS system, N, N'-diace 23.2 57 0.002 22.2 2.7 34 8-50 25-58 (103)
163 1pc2_A Mitochondria fission pr 22.9 1.4E+02 0.0048 21.4 4.9 41 80-125 76-116 (152)
164 2vuv_A Codakine; sugar-binding 22.5 1E+02 0.0035 19.8 3.8 36 88-125 20-55 (129)
165 3fp2_A TPR repeat-containing p 22.5 46 0.0016 25.9 2.4 29 78-106 28-56 (537)
166 2rpa_A Katanin P60 ATPase-cont 22.0 1E+02 0.0035 19.9 3.6 51 71-121 8-60 (78)
167 3vpp_A C-type lectin domain fa 21.9 1.1E+02 0.0037 19.7 3.9 35 88-124 22-56 (132)
168 1umr_C Convulxin beta, CVX bet 21.4 95 0.0033 19.8 3.5 42 83-124 16-58 (125)
169 1jwi_B Platelet aggregation in 21.3 95 0.0033 19.9 3.5 42 83-124 16-58 (125)
170 3sf4_A G-protein-signaling mod 21.1 2.4E+02 0.0084 20.5 8.8 99 8-108 16-120 (406)
171 3k1s_A PTS system, cellobiose- 20.6 69 0.0023 22.1 2.7 20 8-27 29-48 (109)
172 3ro2_A PINS homolog, G-protein 20.5 2.2E+02 0.0075 19.7 8.9 31 78-108 86-116 (338)
173 1jwi_A Bitiscetin; domain swap 20.5 1.2E+02 0.004 19.4 3.8 41 83-125 16-57 (131)
174 2bpd_A Dectin-1; receptor, bet 20.2 1.1E+02 0.0037 20.3 3.7 41 82-124 28-69 (142)
175 1j34_B Coagulation factor IX-b 20.2 1E+02 0.0036 19.5 3.5 38 88-125 20-57 (123)
No 1
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=100.00 E-value=1.9e-48 Score=323.08 Aligned_cols=126 Identities=51% Similarity=0.883 Sum_probs=123.2
Q ss_pred ChHHHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHhhhhhhccCCCCCCCccccCCCCC------------CCChHH
Q psy2692 7 TSESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVTAFPTRKV------------DRSSID 74 (133)
Q Consensus 7 ~~~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~~s~~~~~~~p~lp~l~~~~~rn~------------~~~l~~ 74 (133)
.+..|||||+||+||||||||+|+|||+|||++|+++|.+|++|+|++|++|||..|++||| ++++++
T Consensus 22 laadhvaAGsFe~A~~lLnrQ~Givnf~PLk~~F~~~y~~s~~~l~~~~~~p~l~~~~~r~~~~~~~~~~lP~i~~~l~~ 101 (320)
T 3mkr_B 22 LPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLND 101 (320)
T ss_dssp CHHHHHHTTCHHHHHHHHHHHSCBCCCGGGHHHHHHHHTTSCEEECSSTTSCCEEECCBTTTTTCCSSSCCBCCCCCHHH
T ss_pred cHHHHHHccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhccCCCCCCcchhhhcCCccccccccCCCCcccCHHH
Confidence 47899999999999999999999999999999999999999999999999999999999996 669999
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhhhc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYIVG 132 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYila 132 (133)
|.++||+|||+||+|||+||++.||+|||++||++|+|++|++|++|+|++|||||+|
T Consensus 102 l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYila 159 (320)
T 3mkr_B 102 LIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVG 159 (320)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999997
No 2
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=100.00 E-value=3.2e-48 Score=322.15 Aligned_cols=125 Identities=25% Similarity=0.338 Sum_probs=122.3
Q ss_pred ChHHHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHhhhhhhccCCC-CCCCccccCCCCC------------CCChH
Q psy2692 7 TSESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLP-LLAPVTAFPTRKV------------DRSSI 73 (133)
Q Consensus 7 ~~~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~~s~~~~~~~p-~lp~l~~~~~rn~------------~~~l~ 73 (133)
.+..+||||+||+||||||||+|+|||+|||++|+++|.+|++|+|++| ++||+..|++||| + +++
T Consensus 34 laadhvAAGsFetAm~lLnrQvGivnf~PLk~~F~~~y~~s~~~l~~~~~~lp~l~~~~~r~~~e~~~~~~lP~i~-~l~ 112 (325)
T 3mv2_A 34 LPAVLVAAGAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTVSEDQILPYVP-GLD 112 (325)
T ss_dssp SHHHHHHTTCHHHHHHHHHHHHCBCCCGGGHHHHHHHHHHTEEEECCSSTTSCCEEEECBSSCSSSCGGGCCBCCC-CHH
T ss_pred cHHHHHHccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhcccCCCCCCcchhhhcCCccccccccCCCCCC-CHH
Confidence 4789999999999999999999999999999999999999999999999 9999999999996 6 899
Q ss_pred HHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhhhc
Q psy2692 74 DLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYIVG 132 (133)
Q Consensus 74 ~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYila 132 (133)
+|.++||+|||+||+|||+||++.||+|||.|||++|+|++|++|++|+|+||||||+|
T Consensus 113 ~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYila 171 (325)
T 3mv2_A 113 VVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILG 171 (325)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997
No 3
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=88.88 E-value=1.5 Score=27.84 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=49.7
Q ss_pred hHHHHhccCHHHHHHHHHhhcCcccccccHH--HHHH--HHhhhhhhccCCCCCCCccccCCCCCCCChHHHHHHHHHHH
Q psy2692 8 SESINKSSSFETAFKLLHDQIGVKNFLPYRQ--MFLN--SYLQSRTAYSTLPLLAPVTAFPTRKVDRSSIDLIAKIQQCY 83 (133)
Q Consensus 8 ~~~~~AAGsFe~A~~LLnrQiGivNf~PLk~--~F~~--~y~~s~~~~~~~p~lp~l~~~~~rn~~~~l~~L~~~Lk~gy 83 (133)
+..+...|+|+.|...+++-+..-.-.|..+ ++.- +|....-+-.++.. +.-.+..+ |-+..........|.
T Consensus 9 a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~---~~~~~~~~-p~~~~~~~~~~~la~ 84 (129)
T 2xev_A 9 AFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ---FRDLVSRY-PTHDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHH---HHHHHHHC-TTSTTHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHH---HHHHHHHC-CCCcccHHHHHHHHH
Confidence 3567789999999999998665544444322 1111 11111100000000 00000000 111101122455566
Q ss_pred HhcccCCHHHHHHHHHHHHHHcc
Q psy2692 84 QLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 84 k~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
-+...|++++|+..|+.++..-|
T Consensus 85 ~~~~~g~~~~A~~~~~~~~~~~p 107 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQVATQYP 107 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHcCCHHHHHHHHHHHHHHCC
Confidence 67789999999999999998776
No 4
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=87.93 E-value=1.2 Score=29.61 Aligned_cols=54 Identities=9% Similarity=0.187 Sum_probs=39.1
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhh
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYI 130 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYi 130 (133)
.+.++.|-+.=+.|++++|+..+.+.+-.....+-...++ ..-..+-..|.||+
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~-~~k~~lr~K~~eYl 70 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDN-TKRCNLREKISKYM 70 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCH-HHHHHHHHHHHHHH
Confidence 4467999999999999999999999997766554332222 22233666888886
No 5
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=86.12 E-value=4.6 Score=25.33 Aligned_cols=46 Identities=13% Similarity=0.011 Sum_probs=33.5
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHH
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINIC 126 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ic 126 (133)
..-|.-+...|++++|+..|+..+...+-. .+.....++.+++...
T Consensus 45 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~--~~~~~~~~l~~~l~~~ 90 (100)
T 3ma5_A 45 YHLGKLYERLDRTDDAIDTYAQGIEVAREE--GTQKDLSELQDAKLKA 90 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhhhcC--CchhHHHHHHHHHHHc
Confidence 344666678899999999999999876643 4556666666666544
No 6
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=85.51 E-value=1.6 Score=30.65 Aligned_cols=58 Identities=16% Similarity=0.243 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhh
Q psy2692 73 IDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYI 130 (133)
Q Consensus 73 ~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYi 130 (133)
+.-.+.++.|...=+.|++++|+..+...+..+...+-....+...-..+-..|.||+
T Consensus 16 ~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl 73 (117)
T 2cpt_A 16 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYL 73 (117)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 3445567888888899999999999999998766654322112222233667788886
No 7
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=84.58 E-value=7 Score=27.20 Aligned_cols=42 Identities=12% Similarity=-0.050 Sum_probs=31.3
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
..+.|.-+...|++++|+..|+..+..-| +.+-.++++++++
T Consensus 107 ~~~lg~~~~~lg~~~eA~~~~~~al~l~~-----~~~~~~~A~~ll~ 148 (151)
T 3gyz_A 107 VFHTGQCQLRLKAPLKAKECFELVIQHSN-----DEKLKIKAQSYLD 148 (151)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHH
Confidence 35667778899999999999999999875 3344555555554
No 8
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=84.06 E-value=1.9 Score=28.64 Aligned_cols=33 Identities=9% Similarity=0.109 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
-...-+.|-.++..|+|++|+..|+..|..-|-
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~ 45 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE 45 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 334557799999999999999999999987764
No 9
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=81.65 E-value=4.5 Score=27.00 Aligned_cols=56 Identities=11% Similarity=0.168 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhh
Q psy2692 74 DLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYI 130 (133)
Q Consensus 74 ~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYi 130 (133)
.-.+.++.|-+.=+.|++++|+..+..-+..+...+-...++. .-.-+-..|.||+
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~-~k~~l~~K~~eYl 69 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESS-KRCVLRTKISGYM 69 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHH
Confidence 3445678899999999999999999999887766544332222 2333777888886
No 10
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=80.73 E-value=3.8 Score=26.57 Aligned_cols=58 Identities=21% Similarity=0.186 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhh
Q psy2692 72 SIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYI 130 (133)
Q Consensus 72 l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYi 130 (133)
++.-.+.++.|.+.=+.|++++|+..+.+.+......+-...+ ...-..+-..|.||+
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~-~~~k~~l~~k~~eYl 67 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKN-PKSKDLIRAKFTEYL 67 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHH
Confidence 3344556788888889999999999999998876655433222 222334677788886
No 11
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=78.97 E-value=3.4 Score=28.83 Aligned_cols=38 Identities=13% Similarity=0.015 Sum_probs=31.0
Q ss_pred CChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 70 RSSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 70 ~~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.+.++.......|+.++..|++++|+..|+.++..-|-
T Consensus 31 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~ 68 (151)
T 3gyz_A 31 IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY 68 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34556667788899999999999999999999887663
No 12
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=78.90 E-value=3 Score=25.43 Aligned_cols=29 Identities=17% Similarity=0.308 Sum_probs=19.5
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....|..++..|++++|+..|+..+..-|
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p 35 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQP 35 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 44566666777777777777777776655
No 13
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=78.83 E-value=3.7 Score=28.52 Aligned_cols=31 Identities=13% Similarity=0.073 Sum_probs=26.9
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
....|..++..|++++|+..|+..+...|-.
T Consensus 41 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~ 71 (198)
T 2fbn_A 41 IKEEGNEFFKKNEINEAIVKYKEALDFFIHT 71 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 5678999999999999999999999876643
No 14
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=78.33 E-value=2.6 Score=30.89 Aligned_cols=31 Identities=10% Similarity=0.156 Sum_probs=28.7
Q ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 77 AKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 77 ~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
..++.|..++..|+|++|+..|+..|..-|-
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~ 43 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHT 43 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC
Confidence 3578999999999999999999999999987
No 15
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=78.02 E-value=2.8 Score=30.40 Aligned_cols=95 Identities=11% Similarity=0.066 Sum_probs=50.8
Q ss_pred HHHHhccCHHHHHHHHHhhcCcccccccHHH--HH--HHHhhhhhhccCCCCCCCccccCCCCCCCChHHHHHHHHHHHH
Q psy2692 9 ESINKSSSFETAFKLLHDQIGVKNFLPYRQM--FL--NSYLQSRTAYSTLPLLAPVTAFPTRKVDRSSIDLIAKIQQCYQ 84 (133)
Q Consensus 9 ~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~--F~--~~y~~s~~~~~~~p~lp~l~~~~~rn~~~~l~~L~~~Lk~gyk 84 (133)
..+...|+|+.|...+++-+..-.-.|..+. |. .+|....-+-.++.. +.-.+..+ |-+...-......|.-
T Consensus 23 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~---~~~~l~~~-p~~~~~~~a~~~lg~~ 98 (261)
T 3qky_A 23 MEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASE---YERFIQIY-QIDPRVPQAEYERAMC 98 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHH---HHHHHHHC-TTCTTHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHH---HHHHHHHC-CCCchhHHHHHHHHHH
Confidence 4567889999999999998765444443321 11 111111111000000 00000000 1111112224556666
Q ss_pred hcc--------cCCHHHHHHHHHHHHHHccc
Q psy2692 85 LTT--------SGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 85 ~~t--------~gKF~eAl~~Fr~iL~~i~l 107 (133)
++. .|++.+|+..|+.++..-|=
T Consensus 99 ~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~ 129 (261)
T 3qky_A 99 YYKLSPPYELDQTDTRKAIEAFQLFIDRYPN 129 (261)
T ss_dssp HHHHCCCTTSCCHHHHHHHHHHHHHHHHCTT
T ss_pred HHHhcccccccchhHHHHHHHHHHHHHHCcC
Confidence 677 99999999999999988774
No 16
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=76.89 E-value=4.6 Score=26.63 Aligned_cols=36 Identities=17% Similarity=0.103 Sum_probs=26.9
Q ss_pred ChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 71 SSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 71 ~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
+.++.......|..++..|++++|+..|+.++..-|
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p 49 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDH 49 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCC
Confidence 344555567778888888888888888888887665
No 17
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=76.42 E-value=2.3 Score=37.98 Aligned_cols=32 Identities=13% Similarity=0.271 Sum_probs=26.3
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
.-+|.+.+.++.+|++++|++...+ |..+|+-
T Consensus 539 Ll~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 539 LLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 3467899999999999999998887 6677765
No 18
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=74.36 E-value=3.2 Score=25.26 Aligned_cols=29 Identities=21% Similarity=0.409 Sum_probs=21.5
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
++.|..++..|++++|+..|+.++..-|-
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 32 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV 32 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 56677777788888888888887776553
No 19
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=73.44 E-value=3.2 Score=27.36 Aligned_cols=29 Identities=10% Similarity=-0.048 Sum_probs=24.5
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
-+.|..++..|+|++|+..|+..|..-|-
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~~p~ 40 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPS 40 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 35688899999999999999999887664
No 20
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=72.87 E-value=6.1 Score=25.07 Aligned_cols=29 Identities=10% Similarity=0.164 Sum_probs=18.7
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....|..++..|++++|+..|+..+..-|
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p 35 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAP 35 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 34556666667777777777776666554
No 21
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=72.42 E-value=4.6 Score=27.05 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 73 IDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 73 ~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
.........|..++..|++++|+..|+..|..++-.
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~ 44 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTL 44 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 334446688999999999999999999999986543
No 22
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=72.26 E-value=3.4 Score=29.40 Aligned_cols=32 Identities=13% Similarity=0.100 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....++.|..++..|++++|+..|+..+..-|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNI 35 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 44578999999999999999999999998765
No 23
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.35 E-value=6.5 Score=24.94 Aligned_cols=94 Identities=10% Similarity=0.119 Sum_probs=47.9
Q ss_pred HHHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHhhhhhhccCCCC-CCCccccCCCCCCCChHHHHHHHHHHHHhcc
Q psy2692 9 ESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPL-LAPVTAFPTRKVDRSSIDLIAKIQQCYQLTT 87 (133)
Q Consensus 9 ~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~~s~~~~~~~p~-lp~l~~~~~rn~~~~l~~L~~~Lk~gyk~~t 87 (133)
..+...|+|+.|++.+++-+.+-.-.+...........+......... ..-+.-.+..+ |-. .......|.-+..
T Consensus 36 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~---~~~~~~~a~~~~~ 111 (148)
T 2dba_A 36 NELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD-GGD---VKALYRRSQALEK 111 (148)
T ss_dssp HHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-SCC---HHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-ccC---HHHHHHHHHHHHH
Confidence 456778999999999999876532221112211111111111100000 00000000000 111 2223456667778
Q ss_pred cCCHHHHHHHHHHHHHHcc
Q psy2692 88 SGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 88 ~gKF~eAl~~Fr~iL~~i~ 106 (133)
.|++++|+..|+..+..-|
T Consensus 112 ~~~~~~A~~~~~~al~~~p 130 (148)
T 2dba_A 112 LGRLDQAVLDLQRCVSLEP 130 (148)
T ss_dssp HTCHHHHHHHHHHHHHHCS
T ss_pred cCCHHHHHHHHHHHHHcCC
Confidence 8999999999999998765
No 24
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=70.96 E-value=25 Score=24.93 Aligned_cols=32 Identities=13% Similarity=-0.054 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
......-|.-+...|++++|+..|+..+..-|
T Consensus 278 ~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~ 309 (311)
T 3nf1_A 278 TTTLKNLGALYRRQGKFEAAETLEEAAMRSRK 309 (311)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhh
Confidence 33345667777889999999999999887543
No 25
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=70.23 E-value=5.2 Score=25.09 Aligned_cols=28 Identities=21% Similarity=0.333 Sum_probs=19.6
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...|..++..|++++|+..|+.++..-|
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p 33 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYP 33 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCC
Confidence 4566677777777777777777776655
No 26
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=69.77 E-value=24 Score=24.31 Aligned_cols=52 Identities=15% Similarity=0.274 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHH-HHHHHHHHhhhc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAK-QIINICKEYIVG 132 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~-eli~icrEYila 132 (133)
....+.+|-+++..|...||+..|+.+.-. .+.+|.+++- =+++-||.=+.|
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~------ten~~i~ki~~fyl~ec~kklag 105 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNL------SDNEEIKKIASFYLEECRKKLAG 105 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHcc------ccCHHHHHHHHHHHHHHHHHhcC
Confidence 444678899999999999999999998742 3456666665 478999976655
No 27
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=69.24 E-value=8.7 Score=25.93 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 72 SIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 72 l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.++.......|..+...|++++|+..|+.++..-|
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 52 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDH 52 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCc
Confidence 34445556677777777888888888877776655
No 28
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=68.96 E-value=7.6 Score=30.91 Aligned_cols=99 Identities=11% Similarity=0.037 Sum_probs=51.7
Q ss_pred hHHHHhccCHHHHHHHHHhhcCcccccc----------cHHHHHHHH-hhhhhhccCCCCCCCccccCCCCCCCChHHHH
Q psy2692 8 SESINKSSSFETAFKLLHDQIGVKNFLP----------YRQMFLNSY-LQSRTAYSTLPLLAPVTAFPTRKVDRSSIDLI 76 (133)
Q Consensus 8 ~~~~~AAGsFe~A~~LLnrQiGivNf~P----------Lk~~F~~~y-~~s~~~~~~~p~lp~l~~~~~rn~~~~l~~L~ 76 (133)
+..+...|+|+.|+..+++-+.+.+-.| +.+....+| .-+.+++-.-..-..+. +..+-.....+...
T Consensus 230 g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~-~~~~al~~~p~~~~ 308 (370)
T 1ihg_A 230 GNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD-SCLEALEIDPSNTK 308 (370)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHTTCTTCHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH-HHHHHHHhCchhHH
Confidence 3456788999999999998876543322 333333333 11222211000000000 00000000111122
Q ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 77 AKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 77 ~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.....|.-+...|++++|+..|+..+..-|-
T Consensus 309 a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~ 339 (370)
T 1ihg_A 309 ALYRRAQGWQGLKEYDQALADLKKAQEIAPE 339 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 3455666777889999999999999988763
No 29
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=67.90 E-value=6.6 Score=25.77 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=36.5
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhh
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYI 130 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYi 130 (133)
.+.++.|-+.=+.|++++|+..+++-+..+...+-...+ ...-.-+-..|.||+
T Consensus 20 i~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d-~~~k~~ir~K~~eY~ 73 (83)
T 2w2u_A 20 RKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRD-GSTAAIYEQMINEYK 73 (83)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTT-SSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHH
Confidence 446788888889999999999999998876655432211 111222566677765
No 30
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=67.86 E-value=11 Score=23.91 Aligned_cols=29 Identities=14% Similarity=0.275 Sum_probs=23.9
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...-|.-+...|++++|+..|+..+..-|
T Consensus 64 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p 92 (117)
T 3k9i_A 64 RVFYAMVLYNLGRYEQGVELLLKIIAETS 92 (117)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34557777889999999999999998765
No 31
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=67.08 E-value=8.2 Score=23.11 Aligned_cols=29 Identities=14% Similarity=0.154 Sum_probs=16.8
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....|..+...|++++|+..|+..+..-|
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 35 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDP 35 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCC
Confidence 34455555566666666666666655544
No 32
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=66.93 E-value=7.4 Score=25.36 Aligned_cols=54 Identities=15% Similarity=0.163 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhh
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYI 130 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYi 130 (133)
.+.++.|-+.=+.|++++|+..+++-|..+...+-...++ ..-.-+-..|.||+
T Consensus 12 i~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~-~~k~~ir~K~~eY~ 65 (83)
T 2v6y_A 12 RKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPES-VARTAYEQMINEYK 65 (83)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTC-TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHH
Confidence 4467888888899999999999999988766554322111 11122556666664
No 33
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=63.60 E-value=19 Score=28.78 Aligned_cols=33 Identities=15% Similarity=-0.007 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.......|.-+...|++++|+..|+.++..-|-
T Consensus 200 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 232 (597)
T 2xpi_A 200 ASMCYLRGQVYTNLSNFDRAKECYKEALMVDAK 232 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCch
Confidence 333455566677899999999999999987653
No 34
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=62.46 E-value=8 Score=25.17 Aligned_cols=29 Identities=10% Similarity=0.137 Sum_probs=21.7
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.+..|..+...|++++|+..|+.++..-|
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P 48 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEP 48 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 45667777778888888888888777655
No 35
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=61.48 E-value=13 Score=24.77 Aligned_cols=32 Identities=13% Similarity=0.071 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.......|..++..|++++|+..|+..+..-|
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 42 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAP 42 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34456777788888888888888888877665
No 36
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=61.25 E-value=6.3 Score=30.28 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=27.4
Q ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 77 AKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 77 ~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.+|.+|-+++..|++++|++.|+.++..-+-
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~ 36 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSS 36 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc
Confidence 4788999999999999999999999986654
No 37
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=60.94 E-value=9.2 Score=24.16 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=24.8
Q ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 77 AKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 77 ~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.....|..++..|++++|+..|+..+..-|-
T Consensus 11 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 41 (137)
T 3q49_B 11 ELKEQGNRLFVGRKYPEAAACYGRAITRNPL 41 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC
Confidence 3467788888899999999999988887654
No 38
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=60.27 E-value=11 Score=25.99 Aligned_cols=56 Identities=18% Similarity=0.222 Sum_probs=32.6
Q ss_pred ChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhh
Q psy2692 71 SSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYI 130 (133)
Q Consensus 71 ~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYi 130 (133)
++....++ .+=++...|||+|||++-+...-.+--.---+ +.+++.+-|++=|+|-
T Consensus 13 n~AH~~~R--rAe~ll~~gkydeAIech~kAa~yL~eAmklt--qs~qa~~SLqLQrd~H 68 (97)
T 2crb_A 13 NLAHQQSR--RADRLLAAGKYEEAISCHRKATTYLSEAMKLT--ESEQAHLSLELQRDSH 68 (97)
T ss_dssp HHHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHH
T ss_pred hhhhHhhh--HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHH
Confidence 34444443 34467889999999999988764332211111 1223566667767663
No 39
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=59.91 E-value=11 Score=23.48 Aligned_cols=30 Identities=7% Similarity=0.017 Sum_probs=25.9
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
....|.-+...|++++|+..|+.++..-|-
T Consensus 10 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 39 (100)
T 3ma5_A 10 RYALAQEHLKHDNASRALALFEELVETDPD 39 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 456788888999999999999999988764
No 40
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=59.78 E-value=8.3 Score=25.91 Aligned_cols=28 Identities=29% Similarity=0.350 Sum_probs=23.1
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
++-|.-....|+|++|+..|+.+|..=|
T Consensus 9 ~~lG~~~~~~g~~~~A~~~~~~al~~~p 36 (184)
T 3vtx_A 9 MDIGDKKRTKGDFDGAIRAYKKVLKADP 36 (184)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4557777889999999999999988755
No 41
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=59.66 E-value=29 Score=22.52 Aligned_cols=29 Identities=7% Similarity=-0.087 Sum_probs=25.1
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
...|.-+...|++++|+..|+..+..-|-
T Consensus 90 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 90 FHAAECHLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 45677778899999999999999998884
No 42
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=59.10 E-value=17 Score=22.87 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=31.8
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHH
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKE 128 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrE 128 (133)
....|.-+...|++++|+..|+..+..-|=.. +..+..++...+..|.+
T Consensus 75 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 75 YIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQ 123 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHH
Confidence 45667777888999999999999998773221 11222345555555543
No 43
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=59.09 E-value=4.6 Score=30.40 Aligned_cols=31 Identities=26% Similarity=0.128 Sum_probs=26.1
Q ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 77 AKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 77 ~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
..+.-|.-+...|++++|+..|+.++..-|=
T Consensus 221 ~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~ 251 (287)
T 3qou_A 221 LATQLALQLHQVGRNEEALELLFGHLRXDLT 251 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcccc
Confidence 3566677888999999999999999998763
No 44
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=58.79 E-value=19 Score=20.73 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=17.3
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...|.-+...|++++|+..|+..+..-|
T Consensus 13 ~~la~~~~~~~~~~~A~~~~~~a~~~~~ 40 (91)
T 1na3_A 13 YNLGNAYYKQGDYDEAIEYYQKALELDP 40 (91)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCC
Confidence 3445556666777777777776665543
No 45
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=58.58 E-value=17 Score=26.47 Aligned_cols=46 Identities=13% Similarity=0.082 Sum_probs=34.6
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHH
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINI 125 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~i 125 (133)
.+.|.-+...|+++||+..|+..|...|==.. -..|.+.+++.+.-
T Consensus 106 ~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~-~~~~~~~~~~~~~~ 151 (159)
T 2hr2_A 106 YSRALALDGLGRGAEAMPEFKKVVEMIEERKG-ETPGKERMMEVAID 151 (159)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCS-CCTTHHHHHHHHHH
T ss_pred HhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHH
Confidence 67888999999999999999999999875322 24455556665543
No 46
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=58.36 E-value=8.9 Score=27.61 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.......|..++..|++++|+..|+.++..-|-
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~ 47 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT 47 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC
Confidence 344678888888899999999999988877653
No 47
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=58.25 E-value=19 Score=23.86 Aligned_cols=30 Identities=20% Similarity=0.150 Sum_probs=25.4
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
....|.-+...|++++|+..|+..+..-|=
T Consensus 100 ~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 129 (162)
T 3rkv_A 100 LFRRAKARIAAWKLDEAEEDLKLLLRNHPA 129 (162)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCCC
Confidence 456677788899999999999999988663
No 48
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=58.11 E-value=18 Score=22.80 Aligned_cols=32 Identities=19% Similarity=0.111 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
......|.-+...|++++|+..|+..+..-|-
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 59 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN 59 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 33567788888999999999999999987663
No 49
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=58.03 E-value=41 Score=27.18 Aligned_cols=32 Identities=9% Similarity=0.180 Sum_probs=28.4
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLLV 109 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~v 109 (133)
....|..++..|++++|+..|+..|...|-..
T Consensus 271 ~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~ 302 (457)
T 1kt0_A 271 VKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEY 302 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhcccc
Confidence 55789999999999999999999999888653
No 50
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=57.99 E-value=16 Score=22.41 Aligned_cols=31 Identities=6% Similarity=0.094 Sum_probs=18.3
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICI 105 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i 105 (133)
.......|..+...|++++|+..|+..+..-
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 46 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRN 46 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3334455666666666666666666666543
No 51
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=57.96 E-value=24 Score=24.16 Aligned_cols=30 Identities=17% Similarity=-0.034 Sum_probs=23.8
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
....|.-+...|++++|+..|+..+..-|-
T Consensus 125 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 154 (198)
T 2fbn_A 125 LYKLGVANMYFGFLEEAKENLYKAASLNPN 154 (198)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 455677778889999999999999887663
No 52
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=57.34 E-value=8.5 Score=24.82 Aligned_cols=31 Identities=19% Similarity=-0.019 Sum_probs=26.7
Q ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 77 AKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 77 ~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
..+-.|.-.+..|++++|+..++.+|..-|=
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 3455588899999999999999999998776
No 53
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=56.82 E-value=44 Score=25.66 Aligned_cols=32 Identities=9% Similarity=0.150 Sum_probs=28.5
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLLV 109 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~v 109 (133)
....|..++..|++++|+..|+..+...|-..
T Consensus 150 ~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~ 181 (336)
T 1p5q_A 150 VKERGTVYFKEGKYKQALLQYKKIVSWLEYES 181 (336)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHhhccc
Confidence 55789999999999999999999999988763
No 54
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=56.28 E-value=12 Score=26.59 Aligned_cols=27 Identities=22% Similarity=0.247 Sum_probs=13.3
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
+.|..++..|++++|+..|..++..-|
T Consensus 9 ~~a~~~~~~g~~~~A~~~~~~~~~~~p 35 (225)
T 2yhc_A 9 ATAQQKLQDGNWRQAITQLEALDNRYP 35 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 444444555555555555555554433
No 55
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=55.79 E-value=43 Score=22.49 Aligned_cols=30 Identities=23% Similarity=0.160 Sum_probs=24.7
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.+.-|.-+...|++++|+..|+.++..-|-
T Consensus 111 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 111 ACELAVQYNQVGRDEEALELLWNILKVNLG 140 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCcc
Confidence 455677778899999999999999987663
No 56
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.49 E-value=14 Score=23.32 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 74 DLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 74 ~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
........|..++..|++++|+..|+.++..-|
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 59 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDA 59 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc
Confidence 345567889999999999999999999987655
No 57
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=54.82 E-value=41 Score=23.27 Aligned_cols=93 Identities=10% Similarity=0.035 Sum_probs=48.1
Q ss_pred HHHHhccCHHHHHHHHHhhcCccc-ccccHHHHHHHHhhhhhhccCCCCCCCccccCCCCCCCChHHHHHHHHHHHHhcc
Q psy2692 9 ESINKSSSFETAFKLLHDQIGVKN-FLPYRQMFLNSYLQSRTAYSTLPLLAPVTAFPTRKVDRSSIDLIAKIQQCYQLTT 87 (133)
Q Consensus 9 ~~~~AAGsFe~A~~LLnrQiGivN-f~PLk~~F~~~y~~s~~~~~~~p~lp~l~~~~~rn~~~~l~~L~~~Lk~gyk~~t 87 (133)
..+...|+|+.|...+++-+.+-. -.+ ..++ ..+.++...-..--.+. +..+--....+........|.-+..
T Consensus 15 ~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~----~~~~~~~~~~~~~~A~~-~~~~al~~~p~~~~~~~~l~~~~~~ 88 (228)
T 4i17_A 15 NDALNAKNYAVAFEKYSEYLKLTNNQDS-VTAY----NCGVCADNIKKYKEAAD-YFDIAIKKNYNLANAYIGKSAAYRD 88 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTTCCH-HHHH----HHHHHHHHTTCHHHHHH-HHHHHHHTTCSHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHhccCCCCc-HHHH----HHHHHHHHhhcHHHHHH-HHHHHHHhCcchHHHHHHHHHHHHH
Confidence 456788999999999998776542 111 1111 11111110000000000 0000000011122334556777788
Q ss_pred cCCHHHHHHHHHHHHHHccc
Q psy2692 88 SGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 88 ~gKF~eAl~~Fr~iL~~i~l 107 (133)
.|++++|+..|+..+..-|-
T Consensus 89 ~~~~~~A~~~~~~al~~~p~ 108 (228)
T 4i17_A 89 MKNNQEYIATLTEGIKAVPG 108 (228)
T ss_dssp TTCHHHHHHHHHHHHHHSTT
T ss_pred cccHHHHHHHHHHHHHHCCC
Confidence 89999999999999987763
No 58
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=53.86 E-value=30 Score=22.38 Aligned_cols=38 Identities=8% Similarity=0.084 Sum_probs=26.7
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHH
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQ 121 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~e 121 (133)
.+.|.-....|++++|++.|+..|..-| |.+....+++
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~kal~~~~-----~~~~~~~l~~ 124 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHRSLSEFR-----DPELVKKVKE 124 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSC-----CHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCc-----CHHHHHHHHH
Confidence 4556667788999999999999887543 4444444443
No 59
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.84 E-value=24 Score=21.22 Aligned_cols=29 Identities=10% Similarity=0.041 Sum_probs=19.0
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....|..+...|++++|+..|+.++..-|
T Consensus 15 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 43 (131)
T 2vyi_A 15 LKTEGNEQMKVENFEAAVHFYGKAIELNP 43 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCC
Confidence 45566666667777777777777666544
No 60
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=53.76 E-value=28 Score=21.03 Aligned_cols=29 Identities=17% Similarity=0.035 Sum_probs=23.8
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....|.-+...|++++|+..|+..+..-|
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 44566677789999999999999998654
No 61
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=53.15 E-value=25 Score=21.23 Aligned_cols=26 Identities=8% Similarity=-0.052 Sum_probs=12.4
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICI 105 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i 105 (133)
..|..++..|++++|+..|+..+..-
T Consensus 9 ~l~~~~~~~~~~~~A~~~~~~a~~~~ 34 (131)
T 1elr_A 9 ELGNDAYKKKDFDTALKHYDKAKELD 34 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 33444444555555555555544443
No 62
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=52.98 E-value=17 Score=21.03 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=23.3
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...|.-+...|++++|+..|+..+..-|
T Consensus 47 ~~l~~~~~~~~~~~~A~~~~~~a~~~~p 74 (91)
T 1na3_A 47 YNLGNAYYKQGDYDEAIEYYQKALELDP 74 (91)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 3556667789999999999999998765
No 63
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=52.18 E-value=14 Score=21.84 Aligned_cols=27 Identities=11% Similarity=0.254 Sum_probs=19.1
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
..|.-+...|++++|+..|+..+..-|
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~~~ 37 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQLDP 37 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCc
Confidence 345556677888888888888776654
No 64
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=52.15 E-value=46 Score=22.49 Aligned_cols=33 Identities=9% Similarity=-0.029 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.......|.-+...|++++|+..|+..+..-|-
T Consensus 121 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 121 CEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE 153 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcc
Confidence 344566777788899999999999999988774
No 65
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=51.94 E-value=17 Score=26.36 Aligned_cols=31 Identities=16% Similarity=0.283 Sum_probs=21.1
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...+..|..++..|++++|+..|+.++..-|
T Consensus 4 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p 34 (359)
T 3ieg_A 4 EKHLELGKKLLAAGQLADALSQFHAAVDGDP 34 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCc
Confidence 3455667777777777777777777776554
No 66
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=50.50 E-value=59 Score=22.39 Aligned_cols=31 Identities=10% Similarity=-0.226 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhcccCCHHHHHHHHHHHHHH
Q psy2692 74 DLIAKIQQCYQLTTSGKFVDAIEKLRNVLIC 104 (133)
Q Consensus 74 ~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~ 104 (133)
.......-|.-+...|++++|+..|+..+..
T Consensus 251 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 251 VNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3344556677778899999999999998753
No 67
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=50.42 E-value=28 Score=22.24 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=20.7
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....|..++..|++++|+..|+..+..-|
T Consensus 16 ~~~~a~~~~~~~~~~~A~~~~~~al~~~~ 44 (166)
T 1a17_A 16 LKTQANDYFKAKDYENAIKFYSQAIELNP 44 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 45667777777777777777777776554
No 68
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=49.77 E-value=37 Score=23.25 Aligned_cols=21 Identities=5% Similarity=0.183 Sum_probs=15.1
Q ss_pred HHHhccCHHHHHHHHHhhcCc
Q psy2692 10 SINKSSSFETAFKLLHDQIGV 30 (133)
Q Consensus 10 ~~~AAGsFe~A~~LLnrQiGi 30 (133)
.+...|+++.|...+++-+-+
T Consensus 88 ~~~~~~~~~~A~~~~~~a~~~ 108 (258)
T 3uq3_A 88 AYHKLGDLKKTIEYYQKSLTE 108 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhc
Confidence 455678888888888776653
No 69
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=49.31 E-value=18 Score=21.67 Aligned_cols=60 Identities=13% Similarity=0.138 Sum_probs=41.3
Q ss_pred HHHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHhhhhhhccCCCCCCCccccCCCCCCCChHHHHHHHHHHHHhccc
Q psy2692 9 ESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVTAFPTRKVDRSSIDLIAKIQQCYQLTTS 88 (133)
Q Consensus 9 ~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~~s~~~~~~~p~lp~l~~~~~rn~~~~l~~L~~~Lk~gyk~~t~ 88 (133)
..+...|+++.|.+.+++-+.. -|..+ . ......|.-+...
T Consensus 8 ~~~~~~~~~~~A~~~~~~al~~-----------------------~p~~~--------------~--~~~~~lg~~~~~~ 48 (99)
T 2kc7_A 8 KELINQGDIENALQALEEFLQT-----------------------EPVGK--------------D--EAYYLMGNAYRKL 48 (99)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH-----------------------CSSTH--------------H--HHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHH-----------------------CCCcH--------------H--HHHHHHHHHHHHc
Confidence 4567889999999988776431 11110 0 0234456666788
Q ss_pred CCHHHHHHHHHHHHHHccc
Q psy2692 89 GKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 89 gKF~eAl~~Fr~iL~~i~l 107 (133)
|++++|+..|+..+..-|-
T Consensus 49 ~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 49 GDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp TCHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHhcCCC
Confidence 9999999999999988664
No 70
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=48.78 E-value=36 Score=22.69 Aligned_cols=29 Identities=17% Similarity=0.066 Sum_probs=25.0
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
...|.-+...|++++|+..|+..+..-|-
T Consensus 93 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 93 FHAAECLLQXGELAEAESGLFLAQELIAN 121 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCcC
Confidence 45677788899999999999999998874
No 71
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=48.76 E-value=16 Score=25.69 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=23.2
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.++.|..++..|++++|+..|+.++..-|-
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~ 35 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKKYN 35 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 467777888888888888888888876653
No 72
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=48.61 E-value=53 Score=26.85 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=47.3
Q ss_pred ChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHH
Q psy2692 71 SSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKE 128 (133)
Q Consensus 71 ~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrE 128 (133)
..+......+-|.-+...|++++|+..++..|...-.+-=.+.-...++.+.+..|+-
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~ 424 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDA 424 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 4455555667777788899999999999999998887777788888888888888874
No 73
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=48.60 E-value=15 Score=22.09 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=24.2
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
...|.-+...|++++|+..|+..+..-|-
T Consensus 42 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 70 (111)
T 2l6j_A 42 SNKAMALIKLGEYTQAIQMCQQGLRYTST 70 (111)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSCSS
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 45667778899999999999999987664
No 74
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=48.47 E-value=21 Score=24.77 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=24.9
Q ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 77 AKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 77 ~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.....|..++..|++++|+..|+.++..-|
T Consensus 9 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~ 38 (228)
T 4i17_A 9 QLKNEGNDALNAKNYAVAFEKYSEYLKLTN 38 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhccC
Confidence 356778888889999999999999888775
No 75
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=47.46 E-value=53 Score=27.53 Aligned_cols=57 Identities=4% Similarity=-0.088 Sum_probs=46.7
Q ss_pred ChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHH
Q psy2692 71 SSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICK 127 (133)
Q Consensus 71 ~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icr 127 (133)
..+......+-|.-+...|++++|+..|+..|...--+-=.+.-+..++..++..|+
T Consensus 389 Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~ 445 (490)
T 3n71_A 389 NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTE 445 (490)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Confidence 445555566777778889999999999999998887777778888888888888887
No 76
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=47.28 E-value=40 Score=21.56 Aligned_cols=25 Identities=28% Similarity=0.396 Sum_probs=13.1
Q ss_pred HHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 82 CYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 82 gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
|.-+...|++++|+..|+..+...|
T Consensus 117 a~~~~~~~~~~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 117 GVALDNLGRFDEAIDSFKIALGLRP 141 (186)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHcCcHHHHHHHHHHHHhcCc
Confidence 3344445555555555555555443
No 77
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=46.83 E-value=21 Score=23.34 Aligned_cols=90 Identities=13% Similarity=0.113 Sum_probs=48.3
Q ss_pred HHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHhhhhhhccCCCC-CCCccccCCCCCCCChHHHHHHHHHHHHhccc
Q psy2692 10 SINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPL-LAPVTAFPTRKVDRSSIDLIAKIQQCYQLTTS 88 (133)
Q Consensus 10 ~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~~s~~~~~~~p~-lp~l~~~~~rn~~~~l~~L~~~Lk~gyk~~t~ 88 (133)
.+...|+|+.|++.+++-+-+ .|--+....-...+...+.-... +....-.+ ....+........|.-+...
T Consensus 22 ~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al----~~~p~~~~a~~~lg~~~~~~ 94 (126)
T 4gco_A 22 EYFKKGDYPTAMRHYNEAVKR---DPENAILYSNRAACLTKLMEFQRALDDCDTCI----RLDSKFIKGYIRKAACLVAM 94 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH----HHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHH----HhhhhhhHHHHHHHHHHHHC
Confidence 567889999999999987643 33322222111111111110000 00000000 00111122345667788889
Q ss_pred CCHHHHHHHHHHHHHHcc
Q psy2692 89 GKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 89 gKF~eAl~~Fr~iL~~i~ 106 (133)
|++++|+..|+.+|..-|
T Consensus 95 ~~~~~A~~~~~~al~l~P 112 (126)
T 4gco_A 95 REWSKAQRAYEDALQVDP 112 (126)
T ss_dssp TCHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHHCc
Confidence 999999999999998765
No 78
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=45.89 E-value=32 Score=26.45 Aligned_cols=30 Identities=17% Similarity=0.061 Sum_probs=23.8
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
..+.|.-+...|++++|+..|+.++..-|-
T Consensus 233 ~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 262 (336)
T 1p5q_A 233 LSRRGEAHLAVNDFELARADFQKVLQLYPN 262 (336)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Confidence 345666777889999999999999887663
No 79
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=45.71 E-value=44 Score=23.26 Aligned_cols=28 Identities=18% Similarity=0.003 Sum_probs=18.2
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
..|.-+...|++++|+..|+..+..-|-
T Consensus 116 ~la~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (275)
T 1xnf_A 116 NRGIALYYGGRDKLAQDDLLAFYQDDPN 143 (275)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 4455556677777777777777765543
No 80
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=45.61 E-value=49 Score=24.79 Aligned_cols=27 Identities=19% Similarity=0.056 Sum_probs=20.6
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
..|.-+...|++++|+..|+.+|..-|
T Consensus 205 ~la~~~~~~g~~~eA~~~l~~al~~~p 231 (291)
T 3mkr_A 205 GQAACHMAQGRWEAAEGVLQEALDKDS 231 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 345566778999999999998887655
No 81
>2k0m_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodospirillum rubrum atcc 11170}
Probab=44.85 E-value=42 Score=23.01 Aligned_cols=36 Identities=8% Similarity=-0.014 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 89 GKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 89 gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
+.-.++...||.||+..+.-..-+++|..-+.+++.
T Consensus 15 ~s~~~~~~~~k~iL~~y~~g~~l~~~d~~~l~~lL~ 50 (104)
T 2k0m_A 15 ARKADALAFMKVMLNRYRPGDIVSTVDGAFLVEALK 50 (104)
T ss_dssp SSHHHHHHHHHHHHHHSCTTEECCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCccCHHHHHHHHHHHH
Confidence 345699999999999999887778887777777764
No 82
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=44.73 E-value=78 Score=22.18 Aligned_cols=31 Identities=10% Similarity=0.054 Sum_probs=26.4
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
......|..++..|++++|+..|+..+..-|
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~ 36 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGT 36 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCc
Confidence 4466789999999999999999999998643
No 83
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=44.00 E-value=21 Score=26.65 Aligned_cols=92 Identities=10% Similarity=-0.005 Sum_probs=49.4
Q ss_pred hHHHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHhhhhhhccCCCC-CCCccccCCCCCCCChHHHHHHHHHHHHhc
Q psy2692 8 SESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPL-LAPVTAFPTRKVDRSSIDLIAKIQQCYQLT 86 (133)
Q Consensus 8 ~~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~~s~~~~~~~p~-lp~l~~~~~rn~~~~l~~L~~~Lk~gyk~~ 86 (133)
+..+...|+|+.|...+++-+.. .|--.....-...+......... ..-+.-.+..+ | +........|.-+.
T Consensus 11 g~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p---~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 11 GNRLFVGRKYPEAAACYGRAITR---NPLVAVYYTNRALCYLKMQQPEQALADCRRALELD-G---QSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH---CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-T---TCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh---CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-C---CCHHHHHHHHHHHH
Confidence 34577899999999999987654 23222211111111111110000 00000000001 1 12233456677788
Q ss_pred ccCCHHHHHHHHHHHHHHcc
Q psy2692 87 TSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 87 t~gKF~eAl~~Fr~iL~~i~ 106 (133)
..|++++|+..|+..+..-|
T Consensus 84 ~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 84 EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCc
Confidence 89999999999999998877
No 84
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=43.63 E-value=79 Score=23.61 Aligned_cols=21 Identities=14% Similarity=-0.013 Sum_probs=15.3
Q ss_pred ccCCHHHHHHHHHHHHHHccc
Q psy2692 87 TSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 87 t~gKF~eAl~~Fr~iL~~i~l 107 (133)
..|++++|+..|+.++..-|-
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~ 198 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSP 198 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCC
T ss_pred CchHHHHHHHHHHHHHHhCCC
Confidence 347788888888888777653
No 85
>2xa6_A KH domain-containing\,RNA-binding\,signal transduction-associated protein 1; transcription, STAR proteins, CD44, cell cycle; NMR {Homo sapiens}
Probab=43.38 E-value=8.6 Score=22.55 Aligned_cols=18 Identities=33% Similarity=0.488 Sum_probs=14.3
Q ss_pred HhccCHHHHHHHHHhhcC
Q psy2692 12 NKSSSFETAFKLLHDQIG 29 (133)
Q Consensus 12 ~AAGsFe~A~~LLnrQiG 29 (133)
----+|--||+||+++|.
T Consensus 19 sLdPsf~Ha~RLl~~EIe 36 (41)
T 2xa6_A 19 SLDPSFTHAMQLLTAEIE 36 (41)
T ss_dssp HSCTTCHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHH
Confidence 334489999999999874
No 86
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=43.07 E-value=5.4 Score=27.27 Aligned_cols=27 Identities=19% Similarity=0.098 Sum_probs=15.2
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.-|.-+...|++++|+..|+.++..-|
T Consensus 45 ~la~~~~~~g~~~~A~~~~~~a~~~~p 71 (176)
T 2r5s_A 45 AKADCLLETKQFELAQELLATIPLEYQ 71 (176)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHCCCHHHHHHHHHHhhhccC
Confidence 334445556666666666666555444
No 87
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=42.78 E-value=30 Score=26.33 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 71 SSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 71 ~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
+.++....+..|..++..|++++|+..|+.++..-|
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p 57 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDP 57 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 345555677888888899999999999999887654
No 88
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=42.45 E-value=33 Score=26.43 Aligned_cols=31 Identities=23% Similarity=0.128 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...+..|..++..|++++|+..|+.++..-|
T Consensus 7 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 37 (514)
T 2gw1_A 7 LALKDKGNQFFRNKKYDDAIKYYNWALELKE 37 (514)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCc
Confidence 3456778888888888888888888888765
No 89
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=41.08 E-value=40 Score=23.75 Aligned_cols=62 Identities=10% Similarity=0.080 Sum_probs=44.0
Q ss_pred HHHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHhhhhhhccCCCCCCCccccCCCCCCCChHHHHHHHHHHHHhccc
Q psy2692 9 ESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVTAFPTRKVDRSSIDLIAKIQQCYQLTTS 88 (133)
Q Consensus 9 ~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~~s~~~~~~~p~lp~l~~~~~rn~~~~l~~L~~~Lk~gyk~~t~ 88 (133)
..+...|+|+.|...+++-+.. .|.-|. .-...+..|.-++..
T Consensus 12 ~~~~~~g~~~~A~~~~~~~~~~-----------------------~p~~~~--------------~~~a~~~lg~~~~~~ 54 (225)
T 2yhc_A 12 QQKLQDGNWRQAITQLEALDNR-----------------------YPFGPY--------------SQQVQLDLIYAYYKN 54 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH-----------------------CTTSTT--------------HHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHh-----------------------CCCChH--------------HHHHHHHHHHHHHhc
Confidence 4567889999999988875421 111110 112356678888999
Q ss_pred CCHHHHHHHHHHHHHHccc
Q psy2692 89 GKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 89 gKF~eAl~~Fr~iL~~i~l 107 (133)
|++++|+..|+.++..-|=
T Consensus 55 ~~~~~A~~~~~~~l~~~P~ 73 (225)
T 2yhc_A 55 ADLPLAQAAIDRFIRLNPT 73 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHHHCcC
Confidence 9999999999999987764
No 90
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=40.13 E-value=91 Score=21.63 Aligned_cols=24 Identities=13% Similarity=0.271 Sum_probs=17.4
Q ss_pred hHHHHhccCHHHHHHHHHhhcCcc
Q psy2692 8 SESINKSSSFETAFKLLHDQIGVK 31 (133)
Q Consensus 8 ~~~~~AAGsFe~A~~LLnrQiGiv 31 (133)
+..+...|+|+.|...+++-+..-
T Consensus 10 a~~~~~~~~~~~A~~~~~~~l~~~ 33 (272)
T 3u4t_A 10 ADFLFKNNNYAEAIEVFNKLEAKK 33 (272)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhC
Confidence 345677888888888888866543
No 91
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=39.71 E-value=64 Score=19.73 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=29.0
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
.-|.-+...|++++|+..|+..+..-|-. .+.....++...+.
T Consensus 58 ~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~l~~~l~ 100 (115)
T 2kat_A 58 WLGKTLQGQGDRAGARQAWESGLAAAQSR--GDQQVVKELQVFLR 100 (115)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhcccc--ccHHHHHHHHHHHH
Confidence 44555667899999999999999876643 33344445544443
No 92
>3vx8_B Autophagy-related protein 3; E1-E2 complex, ligase; 3.11A {Arabidopsis thaliana}
Probab=39.60 E-value=6.9 Score=31.84 Aligned_cols=13 Identities=0% Similarity=-0.084 Sum_probs=11.9
Q ss_pred cCChHHHHhccCH
Q psy2692 5 KVTSESINKSSSF 17 (133)
Q Consensus 5 ~~~~~~~~AAGsF 17 (133)
.+||+++|+||+|
T Consensus 11 ~lTPEEFV~AGD~ 23 (292)
T 3vx8_B 11 VLSVSEFVLAGDN 23 (292)
T ss_dssp CCCHHHHHHHHHH
T ss_pred eeCHHHHHhhhhh
Confidence 5899999999997
No 93
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=39.42 E-value=35 Score=20.27 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=17.8
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...|.-+...|++++|+..|+..+..-|
T Consensus 13 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 40 (125)
T 1na0_A 13 YNLGNAYYKQGDYDEAIEYYQKALELDP 40 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 3445556667777777777777765543
No 94
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=38.71 E-value=29 Score=24.82 Aligned_cols=31 Identities=10% Similarity=-0.050 Sum_probs=24.7
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
.+..|..++..|+|++|+..|+.++..-|-.
T Consensus 25 ~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~ 55 (330)
T 3hym_B 25 VVSLAERHYYNCDFKMCYKLTSVVMEKDPFH 55 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 3556667777899999999999999877643
No 95
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=38.66 E-value=32 Score=22.87 Aligned_cols=29 Identities=17% Similarity=0.150 Sum_probs=23.8
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
...|.-+...|++++|++.|+.++..-|-
T Consensus 111 ~~lg~~~~~~g~~~~A~~~~~~~l~~~p~ 139 (184)
T 3vtx_A 111 YKLGLVYDSMGEHDKAIEAYEKTISIKPG 139 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHhcch
Confidence 34577778899999999999999987664
No 96
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=38.56 E-value=37 Score=26.14 Aligned_cols=31 Identities=10% Similarity=0.060 Sum_probs=27.3
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
....|..++..|+|.+|+..|+..+...|-.
T Consensus 182 ~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~ 212 (338)
T 2if4_A 182 RKMDGNSLFKEEKLEEAMQQYEMAIAYMGDD 212 (338)
T ss_dssp HHHHHHHTCSSSCCHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhccc
Confidence 5578999999999999999999999887653
No 97
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=38.49 E-value=69 Score=19.78 Aligned_cols=31 Identities=10% Similarity=-0.050 Sum_probs=25.7
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
....|.-+...|++++|+..|+..+..-|-.
T Consensus 80 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 80 HFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHChhH
Confidence 4566777788899999999999999988763
No 98
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=38.47 E-value=35 Score=26.28 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=25.0
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
....|.-+...|++++|+..|+.++..-|..
T Consensus 76 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 76 LLRRASANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 4456677788999999999999998877743
No 99
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=38.43 E-value=50 Score=21.24 Aligned_cols=31 Identities=19% Similarity=0.370 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.++++.|=.+.+.|..++|+.+|-+.|...|
T Consensus 18 l~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~ 48 (73)
T 3ax2_A 18 LEEIQLGEELLAQGDYEKGVDHLTNAIAVCG 48 (73)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 4578899999999999999999999887554
No 100
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=38.13 E-value=35 Score=25.39 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=25.6
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.+..|..+...|++++|+..|+.+|..-|
T Consensus 120 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P 148 (287)
T 3qou_A 120 XAQQAMQLMQESNYTDALPLLXDAWQLSN 148 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhCC
Confidence 45678899999999999999999998776
No 101
>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.18.14
Probab=37.95 E-value=12 Score=25.08 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=22.8
Q ss_pred ccccccChHHHH-HHHHHHHHHHHhhhc
Q psy2692 106 PLLVVTTKKEIE-EAKQIINICKEYIVG 132 (133)
Q Consensus 106 ~l~vv~~~~e~~-e~~eli~icrEYila 132 (133)
.=.+|+++++.+ +++++++--.+||.|
T Consensus 10 igIiVe~r~~~a~kvn~iL~~yg~~I~g 37 (86)
T 2nzc_A 10 LTIVVEDREKAYRQVNELLHNFSEDILL 37 (86)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTGGGEEE
T ss_pred EEEEEeCchhhHHHHHHHHHhccCEEEE
Confidence 345678898888 999999999999876
No 102
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=37.03 E-value=36 Score=21.83 Aligned_cols=29 Identities=17% Similarity=-0.066 Sum_probs=22.9
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
...|.-+...|++++|+..|+..+..-|-
T Consensus 55 ~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 55 RSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 44566667789999999999999887763
No 103
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=36.91 E-value=68 Score=27.05 Aligned_cols=37 Identities=14% Similarity=0.039 Sum_probs=31.0
Q ss_pred hHHHHH-HHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 72 SIDLIA-KIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 72 l~~L~~-~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
+.++.. +|.=|+.+..-|..++|...+..|...+--.
T Consensus 352 ~p~l~~yKl~~A~~Lae~G~~~~A~~Ycdai~~~lk~~ 389 (441)
T 3mzk_B 352 FSSILPQKIYHASLLQEQGLNSLGTKYTDYLSSSVRKL 389 (441)
T ss_dssp CGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS
T ss_pred ChhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhC
Confidence 334433 8999999999999999999999999988654
No 104
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=36.79 E-value=22 Score=24.17 Aligned_cols=28 Identities=7% Similarity=-0.056 Sum_probs=16.5
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...|.-+...|++++|+..|+..+..-|
T Consensus 41 ~~lg~~~~~~g~~~~A~~~~~~al~~~~ 68 (213)
T 1hh8_A 41 FNIGCMYTILKNMTEAEKAFTRSINRDK 68 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 3445555566666666666666665543
No 105
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=36.71 E-value=74 Score=23.26 Aligned_cols=28 Identities=25% Similarity=0.188 Sum_probs=19.0
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
..|.-+...|++++|+..|+..+..-|-
T Consensus 137 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 164 (368)
T 1fch_A 137 ALAVSFTNESLQRQACEILRDWLRYTPA 164 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 4455556677777777777777766554
No 106
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=36.51 E-value=98 Score=20.91 Aligned_cols=24 Identities=17% Similarity=0.126 Sum_probs=12.1
Q ss_pred HHHhcccCCHHHHHHHHHHHHHHc
Q psy2692 82 CYQLTTSGKFVDAIEKLRNVLICI 105 (133)
Q Consensus 82 gyk~~t~gKF~eAl~~Fr~iL~~i 105 (133)
|.-+...|++++|+..|+.++..-
T Consensus 166 ~~~~~~~~~~~~A~~~~~~~~~~~ 189 (243)
T 2q7f_A 166 GMCLANEGMLDEALSQFAAVTEQD 189 (243)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC
Confidence 333444555555555555555443
No 107
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=36.46 E-value=53 Score=23.59 Aligned_cols=30 Identities=27% Similarity=0.434 Sum_probs=24.6
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.+..|.-+...|++++|+..|+.++..-|-
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 266 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPS 266 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 445677788899999999999999887654
No 108
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=36.18 E-value=1.2e+02 Score=21.98 Aligned_cols=95 Identities=11% Similarity=0.117 Sum_probs=53.2
Q ss_pred HHHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHh-hhhhhccCCCCC-------CCccccCCCCCCCChHHHHHHHH
Q psy2692 9 ESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYL-QSRTAYSTLPLL-------APVTAFPTRKVDRSSIDLIAKIQ 80 (133)
Q Consensus 9 ~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~-~s~~~~~~~p~l-------p~l~~~~~rn~~~~l~~L~~~Lk 80 (133)
..+...|+|+.|..++++-+-.....|-...+...|. -+..+...-..- ..+......+ -....+.....
T Consensus 83 ~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~--~~~~~~~~~~~ 160 (293)
T 3u3w_A 83 IMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI--DVYQNLYIENA 160 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCS--CTTHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccc--cHHHHHHHHHH
Confidence 3456789999999999997776555555444444442 122221110000 0011000011 01122223456
Q ss_pred HHHHhcccCCHHHHHHHHHHHHHHc
Q psy2692 81 QCYQLTTSGKFVDAIEKLRNVLICI 105 (133)
Q Consensus 81 ~gyk~~t~gKF~eAl~~Fr~iL~~i 105 (133)
-|.-....|++++|+..|+..|...
T Consensus 161 lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 161 IANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 6777788999999999999999644
No 109
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=35.99 E-value=70 Score=23.64 Aligned_cols=30 Identities=23% Similarity=0.199 Sum_probs=22.5
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
...-|.-+...|++++|+..|+..+..-|-
T Consensus 136 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 165 (365)
T 4eqf_A 136 LMALAVSYTNTSHQQDACEALKNWIKQNPK 165 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHHhCcc
Confidence 344566667788999999999988887664
No 110
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=35.73 E-value=28 Score=24.57 Aligned_cols=28 Identities=21% Similarity=0.282 Sum_probs=17.1
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...|..+...|++++|+..|+..+..-|
T Consensus 9 ~~lg~~~~~~g~~~~A~~~~~~al~~~p 36 (217)
T 2pl2_A 9 LRLGVQLYALGRYDAALTLFERALKENP 36 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4455566666666666666666665443
No 111
>1wk1_A Hypothetical protein YK1067A12; lectin C-type domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Caenorhabditis elegans} SCOP: d.169.1.1
Probab=35.16 E-value=20 Score=24.27 Aligned_cols=41 Identities=10% Similarity=-0.200 Sum_probs=32.0
Q ss_pred HHHhccc----CCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 82 CYQLTTS----GKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 82 gyk~~t~----gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
+|+.++. -.+.+|...+++ +-.-|+.++|.+|.+.+.+++.
T Consensus 7 CY~~~~~~~~~~~w~~A~~~C~~--~g~~La~i~s~~e~~~l~~~~~ 51 (150)
T 1wk1_A 7 GVKFLTVNDDILSMPQARNFCAS--AGGYLADDLGDDKNNFYSSIAA 51 (150)
T ss_dssp CCCSSSCCSSCBCHHHHHHHHHH--HTCEECCCCSHHHHHHHHHHTT
T ss_pred EEEEEecCCCccCHHHHHHHHHh--CCCEEeeeCCHHHHHHHHHhhc
Confidence 3455543 579999999999 5788899999999888877653
No 112
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=35.00 E-value=61 Score=21.55 Aligned_cols=28 Identities=14% Similarity=0.226 Sum_probs=15.4
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
...|.-+...|++++|+..|+.++..-|
T Consensus 12 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 39 (225)
T 2vq2_A 12 TQLAMEYMRGQDYRQATASIEDALKSDP 39 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCc
Confidence 4445555555666666666665555433
No 113
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=34.89 E-value=37 Score=22.39 Aligned_cols=31 Identities=6% Similarity=-0.197 Sum_probs=25.6
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
....|.-+...|++++|+..|+..+..-|-.
T Consensus 82 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 112 (164)
T 3sz7_A 82 WSRLGLARFDMADYKGAKEAYEKGIEAEGNG 112 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCc
Confidence 4556777788999999999999999987754
No 114
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=34.60 E-value=37 Score=24.21 Aligned_cols=29 Identities=10% Similarity=0.196 Sum_probs=21.4
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.+..|..+...|++++|+..|+.++..-|
T Consensus 24 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 52 (327)
T 3cv0_A 24 PMEEGLSMLKLANLAEAALAFEAVCQAAP 52 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 45667777778888888888888776554
No 115
>3dt5_A Uncharacterized protein AF_0924; structural genomics, APC7732, unknown function, PSI-2, prote structure initiative; HET: MSE; 1.94A {Archaeoglobus fulgidus}
Probab=34.16 E-value=34 Score=23.94 Aligned_cols=40 Identities=30% Similarity=0.365 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhhhc
Q psy2692 92 VDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYIVG 132 (133)
Q Consensus 92 ~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYila 132 (133)
+|-++.|---|...--.-|-+.+-++|+. -|-.||.|+.|
T Consensus 20 edrlekfyiplikafssyvytaqtedeie-tiitcrrylag 59 (135)
T 3dt5_A 20 EDRLEKFYIPLIKAFSSYVYTAQTEDEIE-TIITCRRYLAG 59 (135)
T ss_dssp HHHHHHTHHHHHHHHHSSCCCTTHHHHHH-HHHHTTGGGSC
T ss_pred HHHHHHHHHHHHHHHHhHheeccchhHHH-HHHHHHHHhcc
Confidence 44555554333333333455666666664 45579999876
No 116
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=34.07 E-value=42 Score=22.30 Aligned_cols=25 Identities=16% Similarity=0.046 Sum_probs=14.2
Q ss_pred HHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 82 CYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 82 gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
|.-+...|++++|+..|+..+..-|
T Consensus 72 g~~~~~~~~~~~A~~~~~~al~~~p 96 (150)
T 4ga2_A 72 GLLYELEENTDKAVECYRRSVELNP 96 (150)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHcCchHHHHHHHHHHHHhCC
Confidence 3344555666666666666665544
No 117
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=33.54 E-value=69 Score=21.79 Aligned_cols=24 Identities=17% Similarity=0.232 Sum_probs=11.5
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHH
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLI 103 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~ 103 (133)
..|..++..|++++|+..|+..+.
T Consensus 10 ~~g~~~~~~~~~~~A~~~~~~a~~ 33 (258)
T 3uq3_A 10 AEGNKFYKARQFDEAIEHYNKAWE 33 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHH
Confidence 344444445555555555554443
No 118
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=33.46 E-value=1.5e+02 Score=22.21 Aligned_cols=38 Identities=21% Similarity=0.110 Sum_probs=33.2
Q ss_pred ChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 71 SSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 71 ~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
+-+.+..+|++.|+....+.+++|.....+|...++-.
T Consensus 8 ~~~~v~~~l~~w~~~i~~~~~~~A~~l~~~i~~~~~~~ 45 (383)
T 3ulq_A 8 SSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQM 45 (383)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 45668889999999999999999999999998877554
No 119
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=33.44 E-value=1.5e+02 Score=22.09 Aligned_cols=35 Identities=9% Similarity=0.025 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 72 SIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 72 l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.......+..|..+...|++++|+..|+.++..-|
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~ 79 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGT 79 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 44455577899999999999999999999998744
No 120
>2dyt_A Autophagy-related protein 3; E2 fold, ligase; 2.50A {Saccharomyces cerevisiae}
Probab=33.39 E-value=9.9 Score=31.16 Aligned_cols=13 Identities=15% Similarity=0.480 Sum_probs=11.6
Q ss_pred cCChHHHHhccCH
Q psy2692 5 KVTSESINKSSSF 17 (133)
Q Consensus 5 ~~~~~~~~AAGsF 17 (133)
.+||+++|+||+|
T Consensus 29 ~lTPeEFV~AGD~ 41 (312)
T 2dyt_A 29 QITPEEFVQAGDY 41 (312)
T ss_dssp CCCHHHHHHHHHH
T ss_pred ccCHHHHHhcchh
Confidence 4799999999987
No 121
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=33.35 E-value=47 Score=24.63 Aligned_cols=29 Identities=17% Similarity=0.137 Sum_probs=23.0
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....|..++..|++++|+..|+..+..-|
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (281)
T 2c2l_A 7 LKEQGNRLFVGRKYPEAAACYGRAITRNP 35 (281)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 45667788888888888888888887766
No 122
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=33.30 E-value=19 Score=28.90 Aligned_cols=90 Identities=6% Similarity=0.062 Sum_probs=49.9
Q ss_pred HHHhccCHHHHHHHHHhhcCcc---cccccHHHHHHHHhhhhh------hccCCCCCCCccccCCCCCCCChHHHHHHHH
Q psy2692 10 SINKSSSFETAFKLLHDQIGVK---NFLPYRQMFLNSYLQSRT------AYSTLPLLAPVTAFPTRKVDRSSIDLIAKIQ 80 (133)
Q Consensus 10 ~~~AAGsFe~A~~LLnrQiGiv---Nf~PLk~~F~~~y~~s~~------~~~~~p~lp~l~~~~~rn~~~~l~~L~~~Lk 80 (133)
.+...|+++.|+++|++-++.- +...+.-.-.++|..-.- .+......+| +..-.=+++.-.|-
T Consensus 109 i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~-------d~~~~~d~~l~~La 181 (310)
T 3mv2_B 109 AQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIE-------DTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC-------HHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc-------cccccchHHHHHHH
Confidence 3566799999999999988875 444555555555533111 1100000000 00000133445566
Q ss_pred HHHHhcccC--CHHHHHHHHHHHHHHcc
Q psy2692 81 QCYQLTTSG--KFVDAIEKLRNVLICIP 106 (133)
Q Consensus 81 ~gyk~~t~g--KF~eAl~~Fr~iL~~i~ 106 (133)
+|+=.+..| |.++|...|.++...-|
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFP 209 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSC
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCC
Confidence 664444333 88899888888877765
No 123
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=33.24 E-value=47 Score=20.95 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=24.3
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
.+-|+-.+..|++++|+..++.++..-|-
T Consensus 50 ~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 50 DYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 45567778999999999999999987764
No 124
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=32.91 E-value=50 Score=26.05 Aligned_cols=30 Identities=20% Similarity=0.068 Sum_probs=26.0
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
....|..++..|++++|+..|+..|...+-
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~ 255 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEG 255 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 457799999999999999999999986543
No 125
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=32.78 E-value=21 Score=26.90 Aligned_cols=27 Identities=15% Similarity=0.096 Sum_probs=20.8
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
..|...+..|+|++|+..|+.++..-|
T Consensus 4 ~~a~~~~~~g~~~~A~~~~~~~~~~~p 30 (388)
T 1w3b_A 4 ELAHREYQAGDFEAAERHCMQLWRQEP 30 (388)
T ss_dssp THHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 346677788888888888888877655
No 126
>1egg_A Macrophage mannose receptor; C-type lectin, sugar binding protein; 2.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1egi_A
Probab=32.49 E-value=16 Score=24.24 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=30.9
Q ss_pred cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHH
Q psy2692 88 SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINI 125 (133)
Q Consensus 88 ~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~i 125 (133)
.-.+.+|...+++. -.-|+.++|.+|.+.+.+++..
T Consensus 29 ~~~w~~A~~~C~~~--g~~La~i~s~~e~~~l~~~~~~ 64 (147)
T 1egg_A 29 KKTWFESRDFCRAL--GGDLASINNKEEQQTIWRLITA 64 (147)
T ss_dssp CBCHHHHHHHHHTT--TCEECCCCSHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHc--CCEECccCCHHHHHHHHHHHHh
Confidence 56899999999985 7888899999999998887754
No 127
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=31.99 E-value=48 Score=19.69 Aligned_cols=23 Identities=22% Similarity=0.247 Sum_probs=11.6
Q ss_pred HHHhcccCCHHHHHHHHHHHHHH
Q psy2692 82 CYQLTTSGKFVDAIEKLRNVLIC 104 (133)
Q Consensus 82 gyk~~t~gKF~eAl~~Fr~iL~~ 104 (133)
|.-+...|++++|+..|+..+..
T Consensus 8 ~~~~~~~~~~~~A~~~~~~~~~~ 30 (136)
T 2fo7_A 8 GNAYYKQGDYDEAIEYYQKALEL 30 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHc
Confidence 33344455555555555555443
No 128
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=31.97 E-value=77 Score=23.70 Aligned_cols=30 Identities=17% Similarity=0.025 Sum_probs=24.5
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
....|.-+...|++++|+..|+..+...+-
T Consensus 129 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 158 (411)
T 4a1s_A 129 SGNLGNTLKVMGRFDEAAICCERHLTLARQ 158 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 456677788899999999999999887543
No 129
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=31.83 E-value=50 Score=20.99 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=24.1
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....|.-+...|++++|+..|+..+..-|
T Consensus 84 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~p 112 (166)
T 1a17_A 84 YYRRAASNMALGKFRAALRDYETVVKVKP 112 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 34567777889999999999999998765
No 130
>3hme_A Bromodomain-containing protein 9; BRD9, bromodomain containing 9 isoform 1, LAVS3040, rhabdomyosarcoma antigen MU-RMS-40.8; 2.23A {Homo sapiens}
Probab=31.65 E-value=1.2e+02 Score=20.51 Aligned_cols=93 Identities=13% Similarity=-0.008 Sum_probs=62.6
Q ss_pred ccccHHHHHHHHhhhhhhccCCCCCCCcccc--C-----CCCCCCChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHc
Q psy2692 33 FLPYRQMFLNSYLQSRTAYSTLPLLAPVTAF--P-----TRKVDRSSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICI 105 (133)
Q Consensus 33 f~PLk~~F~~~y~~s~~~~~~~p~lp~l~~~--~-----~rn~~~~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i 105 (133)
-.|++..+..+...-...=.+.|+.-|...- + -.+ |..++.+..+|+.|. =..+++-..-++-|....
T Consensus 11 ~~p~~~~l~~il~~l~~~~~~~~F~~pv~~~~~pdY~~iIk~-PmdL~tI~~kl~~~~----Y~~~~~f~~D~~li~~Na 85 (123)
T 3hme_A 11 STPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKH-PMDFGTMKDKIVANE----YKSVTEFKADFKLMCDNA 85 (123)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCSSSSCCCTTTSTTHHHHCSS-CCCHHHHHHHHHTTC----CCSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCccHhhcCCCChhhccCHHHHCCC-CCCHHHHHHHhccCC----CCCHHHHHHHHHHHHHHH
Confidence 3677777777766555544455554443110 0 011 889999999998753 245677788888888888
Q ss_pred ccccccChHHHHHHHHHHHHHHHhh
Q psy2692 106 PLLVVTTKKEIEEAKQIINICKEYI 130 (133)
Q Consensus 106 ~l~vv~~~~e~~e~~eli~icrEYi 130 (133)
...--.+..-...++++.+.|.+.+
T Consensus 86 ~~yN~~~s~~~~~A~~L~~~~~~~~ 110 (123)
T 3hme_A 86 MTYNRPDTVYYKLAKKILHAGFKMM 110 (123)
T ss_dssp HHHSCTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHH
Confidence 8877777777777888888877653
No 131
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=31.61 E-value=39 Score=25.08 Aligned_cols=29 Identities=10% Similarity=0.154 Sum_probs=22.5
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.+..|..+...|++++|+..|+.++..-|
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p 96 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQDP 96 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 45667777888888888888888887655
No 132
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=31.55 E-value=36 Score=27.48 Aligned_cols=29 Identities=17% Similarity=0.113 Sum_probs=22.9
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
..+.|.-+...|++++|+..|+.++..-|
T Consensus 354 ~~~~g~a~~~~g~~~~A~~~~~~al~l~P 382 (457)
T 1kt0_A 354 LYRRGEAQLLMNEFESAKGDFEKVLEVNP 382 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 45667777788999999999999988766
No 133
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=30.57 E-value=71 Score=21.56 Aligned_cols=32 Identities=19% Similarity=0.379 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 75 LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 75 L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
..+.++.|=.+.+.|.+++|+.+|-+.|...|
T Consensus 20 Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 20 FLEEIQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 34578999999999999999999988876544
No 134
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=30.53 E-value=81 Score=20.73 Aligned_cols=30 Identities=13% Similarity=0.069 Sum_probs=24.5
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
....|.-+...|++++|+..|+.++..-|-
T Consensus 118 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 118 LMLLASDAFMQANYAQAIELWQKVMDLNSP 147 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Confidence 345566677889999999999999988775
No 135
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=30.41 E-value=1.7e+02 Score=21.90 Aligned_cols=37 Identities=11% Similarity=0.104 Sum_probs=28.2
Q ss_pred HHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHH
Q psy2692 81 QCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEA 119 (133)
Q Consensus 81 ~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~ 119 (133)
.|.-.+..|++++|+..|+..+....-. ++..+..++
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~ 145 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEF 145 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHH
Confidence 7888999999999999999999875543 444444444
No 136
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=30.26 E-value=1.3e+02 Score=20.54 Aligned_cols=19 Identities=5% Similarity=-0.069 Sum_probs=11.3
Q ss_pred HHHhccCHHHHHHHHHhhc
Q psy2692 10 SINKSSSFETAFKLLHDQI 28 (133)
Q Consensus 10 ~~~AAGsFe~A~~LLnrQi 28 (133)
.+...|+++.|.+.+++-+
T Consensus 80 ~~~~~~~~~~A~~~~~~a~ 98 (252)
T 2ho1_A 80 VFQTEMEPKLADEEYRKAL 98 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHH
Confidence 3455666666666666544
No 137
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=29.28 E-value=44 Score=22.15 Aligned_cols=18 Identities=17% Similarity=0.244 Sum_probs=10.0
Q ss_pred HHhccCHHHHHHHHHhhc
Q psy2692 11 INKSSSFETAFKLLHDQI 28 (133)
Q Consensus 11 ~~AAGsFe~A~~LLnrQi 28 (133)
+...|+|+.|.+.+++-+
T Consensus 41 y~~~~~~~~A~~~~~~al 58 (150)
T 4ga2_A 41 YYEAKEYDLAKKYICTYI 58 (150)
T ss_dssp HHHTTCHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHH
Confidence 344566666666655544
No 138
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=28.92 E-value=1.3e+02 Score=24.26 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=21.2
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
..-|.-+...|++++|++.|+..+..-|
T Consensus 95 ~~la~~~~~~g~~~~A~~~~~~al~~~p 122 (568)
T 2vsy_A 95 LWLGHALEDAGQAEAAAAAYTRAHQLLP 122 (568)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4456666778888888888888887766
No 139
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=28.86 E-value=51 Score=22.99 Aligned_cols=30 Identities=13% Similarity=-0.031 Sum_probs=23.0
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
...-|.-+...|++++|+..|+.++..-|-
T Consensus 91 ~~~lg~~~~~~g~~~~A~~~~~~al~~~P~ 120 (208)
T 3urz_A 91 LEACAEMQVCRGQEKDALRMYEKILQLEAD 120 (208)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 445577777888899999999888887663
No 140
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=28.50 E-value=55 Score=21.61 Aligned_cols=27 Identities=7% Similarity=-0.049 Sum_probs=17.4
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
..|.-+...|++++|+..|+..+..-|
T Consensus 49 ~lg~~~~~~~~~~~A~~~~~~al~~~p 75 (177)
T 2e2e_A 49 LLGEYYLWQNDYSNSLLAYRQALQLRG 75 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 445555666777777777777666544
No 141
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=28.27 E-value=1.1e+02 Score=24.80 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=23.7
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
..+.|.-+...|++++|+..|+..+..-|-
T Consensus 77 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~ 106 (477)
T 1wao_1 77 YYRRAASNMALGKFRAALRDYETVVKVKPH 106 (477)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 345566677889999999999999987653
No 142
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=28.24 E-value=12 Score=29.70 Aligned_cols=56 Identities=7% Similarity=0.148 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHHHHHhh
Q psy2692 74 DLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINICKEYI 130 (133)
Q Consensus 74 ~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~icrEYi 130 (133)
.=.+.++.|-++=.+|++++|+..++.-+..+.-.+- ...+.+.-..+-..+.||+
T Consensus 22 ~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk-~e~d~~~k~~lr~Ki~eYl 77 (257)
T 2ymb_A 22 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLK-GTKDNTKRCNLREKISKYM 77 (257)
T ss_dssp ---------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHH
Confidence 3345678888999999999999999999877655433 2333333344677777775
No 143
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=27.74 E-value=1.5e+02 Score=24.35 Aligned_cols=53 Identities=13% Similarity=-0.040 Sum_probs=40.7
Q ss_pred ChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHH
Q psy2692 71 SSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQII 123 (133)
Q Consensus 71 ~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli 123 (133)
..+......+-|.-+...||++||+..|+..|...--+-=.+.-+..++++-+
T Consensus 378 Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 378 SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 44555556677888889999999999999999987766666666777766644
No 144
>3ubu_B Agglucetin subunit beta-2; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}
Probab=27.29 E-value=63 Score=20.59 Aligned_cols=38 Identities=13% Similarity=-0.005 Sum_probs=30.8
Q ss_pred cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHH
Q psy2692 88 SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINI 125 (133)
Q Consensus 88 ~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~i 125 (133)
.-.+.||....++.-+-.-|++++|.+|.+.+..++.-
T Consensus 22 ~~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~ 59 (126)
T 3ubu_B 22 KKTWDDAEKFCTEQRKGGHLVSVHSREEADFLVHLAYP 59 (126)
T ss_dssp EECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhccCCCcEECccCCHHHHHHHHHHHhh
Confidence 55799999999986556778889999998888887653
No 145
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.97 E-value=2e+02 Score=21.58 Aligned_cols=28 Identities=11% Similarity=-0.126 Sum_probs=21.6
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
+-|--+...|++++|++.++.++...+-
T Consensus 60 ~l~~~y~~~~~~~~a~~~~~~~~~~~~~ 87 (434)
T 4b4t_Q 60 ELGQLYVTMGAKDKLREFIPHSTEYMMQ 87 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 4455667899999999999988766544
No 146
>1bb1_A Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1 PDB: 1bb1_C 1u0i_B
Probab=26.68 E-value=61 Score=17.91 Aligned_cols=20 Identities=45% Similarity=0.571 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHHHHhhhc
Q psy2692 113 KKEIEEAKQIINICKEYIVG 132 (133)
Q Consensus 113 ~~e~~e~~eli~icrEYila 132 (133)
++|...+++-|.-.+|||.+
T Consensus 15 keeiaaikdkiaaikeyiaa 34 (36)
T 1bb1_A 15 KEEIAAIKDKIAAIKEYIAA 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 67888888988999999865
No 147
>1tn3_A Tetranectin; plasminogen binding, kringle 4, C-type lectin, carbohydrate recognition domain; 2.00A {Homo sapiens} SCOP: d.169.1.1 PDB: 1rjh_A 3l9j_C
Probab=25.96 E-value=79 Score=20.42 Aligned_cols=41 Identities=17% Similarity=0.065 Sum_probs=32.5
Q ss_pred HHhcc-cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHH
Q psy2692 83 YQLTT-SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINI 125 (133)
Q Consensus 83 yk~~t-~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~i 125 (133)
|+.++ ...+.+|...+++ +-.-|++++|.+|.+.+.+++.-
T Consensus 17 Y~~~~~~~~w~~A~~~C~~--~g~~La~i~s~~e~~~l~~~~~~ 58 (137)
T 1tn3_A 17 FLAFTQTKTFHEASEDCIS--RGGTLSTPQTGSENDALYEYLRQ 58 (137)
T ss_dssp EEEEEEEECHHHHHHHHHH--TTCEECCCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHh--cCCEEcccCCHHHHHHHHHHHHh
Confidence 34433 5679999999998 57889999999999888887753
No 148
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=25.67 E-value=2.4e+02 Score=21.99 Aligned_cols=82 Identities=7% Similarity=0.033 Sum_probs=0.0
Q ss_pred hHHHHhccCHHHHHHHHHhhcCcccccccHHHHHHH--------HhhhhhhccCCCCCCCccccCCCCCCCChHHHHHHH
Q psy2692 8 SESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNS--------YLQSRTAYSTLPLLAPVTAFPTRKVDRSSIDLIAKI 79 (133)
Q Consensus 8 ~~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~--------y~~s~~~~~~~p~lp~l~~~~~rn~~~~l~~L~~~L 79 (133)
+..++..|.|+.|..++.+-+- .+.... ..|... |..+..++......|. .+..-...+
T Consensus 109 A~~L~~~g~y~eA~~~l~~~~~-~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d-----------~~~~~~a~~ 175 (282)
T 4f3v_A 109 AACEAAQGNYADAMEALEAAPV-AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPD-----------KFLAGAAGV 175 (282)
T ss_dssp HHHHHHHTCHHHHHHHHTSSCC-TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC-----------HHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHh-cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCC-----------cccHHHHHH
Q ss_pred HHHHHhcccCCHHHHHHHHHHHH
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVL 102 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL 102 (133)
..|--+-..|+|++|+..|++++
T Consensus 176 ~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 176 AHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHh
No 149
>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A*
Probab=25.49 E-value=78 Score=20.07 Aligned_cols=40 Identities=5% Similarity=0.058 Sum_probs=31.7
Q ss_pred HHhc-ccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 83 YQLT-TSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 83 yk~~-t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
|+.+ +.-.+.+|...+++ +-.-|++++|.+|.+.+.+++.
T Consensus 6 y~~~~~~~~w~~A~~~C~~--~g~~La~i~s~~e~~~l~~~~~ 46 (115)
T 2msb_A 6 FVTNHERMPFSKVKALCSE--LRGTVAIPRNAEENKAIQEVAK 46 (115)
T ss_dssp EEEEEEEECHHHHHHHHHH--TTCEECCCSSHHHHHHHHHHHS
T ss_pred EEEeCCCcCHHHHHHHHHh--CCCEEeccCCHHHHHHHHHhhc
Confidence 3443 35679999999998 5788899999999998887763
No 150
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=25.49 E-value=65 Score=22.56 Aligned_cols=27 Identities=15% Similarity=0.212 Sum_probs=17.0
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.-|.-+...|++++|+..|+..+..-|
T Consensus 156 ~la~~~~~~g~~~~A~~~~~~al~~~P 182 (217)
T 2pl2_A 156 ALAELYLSMGRLDEALAQYAKALEQAP 182 (217)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 344445566777777777777766544
No 151
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=25.28 E-value=90 Score=23.60 Aligned_cols=29 Identities=28% Similarity=0.473 Sum_probs=23.9
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
+..|.-+...|++++|+..|+..+..-|-
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~~p~ 289 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKTEPS 289 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 34477888899999999999999886654
No 152
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=25.16 E-value=2e+02 Score=20.96 Aligned_cols=31 Identities=10% Similarity=0.054 Sum_probs=26.3
Q ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 76 IAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 76 ~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
......|..+...|++++|+..|+.++..-|
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~ 40 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQVGT 40 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCc
Confidence 3456889999999999999999999998744
No 153
>1h8u_A MBP, eosinophil granule major basic protein 1; lectin, eosinophil granule protein, EMBP; 1.8A {Homo sapiens} SCOP: d.169.1.1 PDB: 2brs_A*
Probab=24.91 E-value=90 Score=19.69 Aligned_cols=41 Identities=15% Similarity=0.036 Sum_probs=32.1
Q ss_pred HHhcc-cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 83 YQLTT-SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 83 yk~~t-~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
|+.++ ...+.+|...+++. +-.-|+.++|.+|.+-+.+++.
T Consensus 4 Y~~~~~~~tw~~A~~~C~~~-~g~~La~i~s~~e~~~l~~~~~ 45 (117)
T 1h8u_A 4 YLLVRSLQTFSQAWFTCRRC-YRGNLVSIHNFNINYRIQCSVS 45 (117)
T ss_dssp EEEEEEEECHHHHHHHHHHH-HSSEECCCCSHHHHHHHHHHHT
T ss_pred EEEeCCccCHHHHHHHhccC-CCCeEEeecCHHHHHHHHHHHh
Confidence 34443 55799999999996 6778889999999888877764
No 154
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=24.79 E-value=1.2e+02 Score=22.51 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=21.2
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
.+..|.-....|++++|+..|+..+ ..|-.
T Consensus 198 ~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 198 CIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 4555666666788888888888887 65543
No 155
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=24.03 E-value=1e+02 Score=24.92 Aligned_cols=56 Identities=9% Similarity=0.041 Sum_probs=39.9
Q ss_pred hccCCCCCCCccccCCCCCCCChHH-HHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 50 AYSTLPLLAPVTAFPTRKVDRSSID-LIAKIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 50 ~~~~~p~lp~l~~~~~rn~~~~l~~-L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
.+.+.|.+|-+..++++...+++.. |.+-+.+-|.. ....|++.+..+.++=..+.
T Consensus 2 ~~~~~~~~pmi~l~lK~t~~vd~~~~L~~~I~~~y~e-~~~~~~~~l~~l~~LR~~~~ 58 (363)
T 3rau_A 2 EFEAVPRMPMIWLDLKEAGDFHFQPAVKKFVLKNYGE-NPEAYNEELKKLELLRQNAV 58 (363)
T ss_dssp ----CCCCCCCCCCCCCEEEECCHHHHHHHHHHTTCS-CTTTTHHHHHHHHHHHHHHH
T ss_pred CCccCCcCCccCCCCCcCCCCChHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhc
Confidence 3678999999999999886667766 77788888854 45679999888776555443
No 156
>1jzn_A Galactose-specific lectin; C-type lectin, protein-disaccharide complex, sugar binding P; HET: BGC GAL; 2.20A {Crotalus atrox} SCOP: d.169.1.1 PDB: 1muq_A*
Probab=23.95 E-value=67 Score=20.65 Aligned_cols=43 Identities=19% Similarity=0.032 Sum_probs=33.0
Q ss_pred HHhcc-cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHH
Q psy2692 83 YQLTT-SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINI 125 (133)
Q Consensus 83 yk~~t-~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~i 125 (133)
|+.++ .-.+.+|...+++.-+-.-|+.++|.+|.+.+.+++.-
T Consensus 15 Y~~~~~~~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~ 58 (135)
T 1jzn_A 15 YKIFNQLKTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISD 58 (135)
T ss_dssp EEEEEEEECHHHHHHHHHHHSSSEEECCCCSHHHHHHHHHHHHH
T ss_pred EEEECCccCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHHh
Confidence 34433 56799999999985357788889999999988887753
No 157
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=23.79 E-value=55 Score=22.40 Aligned_cols=20 Identities=15% Similarity=0.197 Sum_probs=17.5
Q ss_pred hHHHHhccCHHHHHHHHHhh
Q psy2692 8 SESINKSSSFETAFKLLHDQ 27 (133)
Q Consensus 8 ~~~~~AAGsFe~A~~LLnrQ 27 (133)
+...+..|+|+.|-++|++-
T Consensus 27 Al~~Ak~g~fe~A~~~l~eA 46 (105)
T 2e2a_A 27 ALKAAENGDFAKADSLVVEA 46 (105)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHH
Confidence 56788999999999999876
No 158
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=23.44 E-value=1.2e+02 Score=20.87 Aligned_cols=29 Identities=31% Similarity=0.249 Sum_probs=22.2
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
...|.-+...|++++|+..|+..+..-|-
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~al~~~~~ 109 (275)
T 1xnf_A 81 NYLGIYLTQAGNFDAAYEAFDSVLELDPT 109 (275)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCcc
Confidence 45566677788888888888888887654
No 159
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=23.43 E-value=61 Score=23.70 Aligned_cols=28 Identities=11% Similarity=0.171 Sum_probs=18.3
Q ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 79 IQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 79 Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
+..|..+...|++++|+..|+.++..-|
T Consensus 68 ~~~~~~~~~~g~~~~A~~~~~~al~~~p 95 (368)
T 1fch_A 68 FEEGLRRLQEGDLPNAVLLFEAAVQQDP 95 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 4556666677777777777777765543
No 160
>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling protein; 2.30A {Homo sapiens} SCOP: d.169.1.1
Probab=23.27 E-value=89 Score=20.00 Aligned_cols=34 Identities=26% Similarity=0.149 Sum_probs=28.8
Q ss_pred cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHH
Q psy2692 88 SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQII 123 (133)
Q Consensus 88 ~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli 123 (133)
...+.+|...+++ +-.-|+.++|++|.+-+.+++
T Consensus 19 ~~~w~~A~~~C~~--~g~~La~i~s~~e~~~l~~~~ 52 (128)
T 1dv8_A 19 GKAWADADNYCRL--EDAHLVVVTSWEEQKFVQHHI 52 (128)
T ss_dssp CBCHHHHHHHHHH--TTCEECCCCSHHHHHHHHHHH
T ss_pred CcCHHHHHHHHhh--CCCEEcccCCHHHHHHHHHhh
Confidence 4579999999998 578889999999988887765
No 161
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=23.26 E-value=1.3e+02 Score=18.26 Aligned_cols=30 Identities=17% Similarity=-0.010 Sum_probs=20.2
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPL 107 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l 107 (133)
....|.-+...|++++|+..|+..+...+-
T Consensus 12 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 41 (164)
T 3ro3_A 12 FGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 41 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 345566666777777777777777766543
No 162
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=23.23 E-value=57 Score=22.22 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=24.6
Q ss_pred hHHHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHhhhhhh
Q psy2692 8 SESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTA 50 (133)
Q Consensus 8 ~~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~~s~~~ 50 (133)
+...+..|+|+.|-++|++- +..+.+.+..-.--
T Consensus 25 Al~~Ak~g~fe~A~~~l~eA---------~~~l~~AH~~Qt~l 58 (103)
T 1wcr_A 25 ALKQAKQGDFAAAKAMMDQS---------RMALNEAHLVQTKL 58 (103)
T ss_dssp HHHHHHTTCHHHHHHHHHHH---------HHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHH---------HHHHHHHHHHHHHH
Confidence 56788999999999999886 55566665443333
No 163
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=22.90 E-value=1.4e+02 Score=21.38 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=31.9
Q ss_pred HHHHHhcccCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHH
Q psy2692 80 QQCYQLTTSGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINI 125 (133)
Q Consensus 80 k~gyk~~t~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~i 125 (133)
.-|.-....|.+.+|...|..+|..=| +..+...++++|+-
T Consensus 76 ~LAv~~~kl~~Y~~A~~y~~~lL~ieP-----~n~QA~~Lk~~ie~ 116 (152)
T 1pc2_A 76 YLAVGNYRLKEYEKALKYVRGLLQTEP-----QNNQAKELERLIDK 116 (152)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHCT-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcCC-----CCHHHHHHHHHHHH
Confidence 445555899999999999999999888 45666777776653
No 164
>2vuv_A Codakine; sugar-binding protein, C-type, lectin, mannose, invertebrate; HET: CIT; 1.3A {Codakia orbicularis} PDB: 2vuz_A*
Probab=22.46 E-value=1e+02 Score=19.81 Aligned_cols=36 Identities=14% Similarity=-0.021 Sum_probs=30.3
Q ss_pred cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHH
Q psy2692 88 SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINI 125 (133)
Q Consensus 88 ~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~i 125 (133)
...+.+|...+++ +-.-|+.++|.+|.+.+.+++..
T Consensus 20 ~~~w~~A~~~C~~--~g~~La~i~s~~e~~~l~~~~~~ 55 (129)
T 2vuv_A 20 KASWASAQSSCQA--LGGILAEPDTACENEVLIHMCKE 55 (129)
T ss_dssp EECHHHHHHHHHH--TTSEECCCCSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHh--cCCEECccCCHHHHHHHHHHHHh
Confidence 4679999999998 47888899999999988887753
No 165
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=22.46 E-value=46 Score=25.90 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=19.3
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIP 106 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~ 106 (133)
....|..++..|+|++|+..|+.++..-|
T Consensus 28 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p 56 (537)
T 3fp2_A 28 LKNRGNHFFTAKNFNEAIKYYQYAIELDP 56 (537)
T ss_dssp HHHHHHHHHHTTCCC-CHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhCC
Confidence 35667777777777777777777776654
No 166
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=21.96 E-value=1e+02 Score=19.93 Aligned_cols=51 Identities=14% Similarity=0.117 Sum_probs=39.2
Q ss_pred ChHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHccc--ccccChHHHHHHHH
Q psy2692 71 SSIDLIAKIQQCYQLTTSGKFVDAIEKLRNVLICIPL--LVVTTKKEIEEAKQ 121 (133)
Q Consensus 71 ~l~~L~~~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l--~vv~~~~e~~e~~e 121 (133)
++..+.+-++.|-..--.|..+.|+..|..++..|-= ...+|..+..+.++
T Consensus 8 ~~~~i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r~kW~~ 60 (78)
T 2rpa_A 8 SLQMIVENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLRQKWQQ 60 (78)
T ss_dssp SSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHHHhHHH
Confidence 5677888999999999999999999999999988742 33345444444444
No 167
>3vpp_A C-type lectin domain family 9 member A; dendritic cell, C-type lectin-like domain, membrane, immune; 1.64A {Homo sapiens}
Probab=21.94 E-value=1.1e+02 Score=19.67 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=29.3
Q ss_pred cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 88 SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 88 ~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
...+.+|....++ +-.-|++++|.+|.+.+.+++.
T Consensus 22 ~~~w~~A~~~C~~--~g~~La~i~s~~e~~~l~~~~~ 56 (132)
T 3vpp_A 22 WSIWHTSQENCLK--EGSTLLQIESKEEMDFITGSLR 56 (132)
T ss_dssp CBCHHHHHHHHHH--TTCEECCCCSHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHh--cCCEEeEECCHHHHHHHHHHHh
Confidence 4569999999998 6788889999999888887663
No 168
>1umr_C Convulxin beta, CVX beta; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_B
Probab=21.36 E-value=95 Score=19.77 Aligned_cols=42 Identities=12% Similarity=0.143 Sum_probs=32.0
Q ss_pred HHhcc-cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 83 YQLTT-SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 83 yk~~t-~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
|+.++ .-.+.+|...+++.-.-.-|+.++|.+|.+.+.+++.
T Consensus 16 Y~~~~~~~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~ 58 (125)
T 1umr_C 16 YKVFKQEMTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTH 58 (125)
T ss_dssp EEEEEEEECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHH
T ss_pred EEEECCCcCHHHHHHHHhccCCcceECccCCHHHHHHHHHHHH
Confidence 44443 4679999999988534677888999999988887765
No 169
>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_B
Probab=21.29 E-value=95 Score=19.89 Aligned_cols=42 Identities=17% Similarity=0.186 Sum_probs=32.9
Q ss_pred HHhcc-cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 83 YQLTT-SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 83 yk~~t-~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
|+.++ ...+.+|....++.-.-.-|+.++|.+|.+-+.+++.
T Consensus 16 Y~~~~~~~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~ 58 (125)
T 1jwi_B 16 YKVFKVEKTWADAEKFCKELVNGGHLMSVNSREEGEFISKLAL 58 (125)
T ss_dssp EEEEEEEECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHH
T ss_pred EEEECCCcCHHHHHHHhhccCCCceECccCCHHHHHHHHHHHH
Confidence 44433 5679999999997656788889999999988888765
No 170
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=21.09 E-value=2.4e+02 Score=20.47 Aligned_cols=99 Identities=12% Similarity=0.046 Sum_probs=51.2
Q ss_pred hHHHHhccCHHHHHHHHHhhcCcccccccHHHHHHHHhhhhhhccCCCCCCCccccCCC------CCCCChHHHHHHHHH
Q psy2692 8 SESINKSSSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVTAFPTR------KVDRSSIDLIAKIQQ 81 (133)
Q Consensus 8 ~~~~~AAGsFe~A~~LLnrQiGivNf~PLk~~F~~~y~~s~~~~~~~p~lp~l~~~~~r------n~~~~l~~L~~~Lk~ 81 (133)
...+...|+|+.|...+++-+.+- ...-.....-.+.-+.++.-.-..-..+. +..+ ...............
T Consensus 16 g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~~~~~~~l 93 (406)
T 3sf4_A 16 GERLCKSGDCRAGVSFFEAAVQVG-TEDLKTLSAIYSQLGNAYFYLHDYAKALE-YHHHDLTLARTIGDQLGEAKASGNL 93 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHhccccHHHHHHHHHH
Confidence 456788899999999999877763 22211111111111122211000000000 0000 000011112224566
Q ss_pred HHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 82 CYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 82 gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
|.-+...|++++|+..|+..+...+-.
T Consensus 94 a~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 94 GNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 777888999999999999999877643
No 171
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=20.64 E-value=69 Score=22.06 Aligned_cols=20 Identities=10% Similarity=0.062 Sum_probs=17.3
Q ss_pred hHHHHhccCHHHHHHHHHhh
Q psy2692 8 SESINKSSSFETAFKLLHDQ 27 (133)
Q Consensus 8 ~~~~~AAGsFe~A~~LLnrQ 27 (133)
+...+..|+|+.|-++|.+-
T Consensus 29 Al~~Ak~gdfe~A~~~l~eA 48 (109)
T 3k1s_A 29 ALQFAKQGKMAEADEAMVKA 48 (109)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHH
Confidence 56778899999999999876
No 172
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=20.53 E-value=2.2e+02 Score=19.73 Aligned_cols=31 Identities=23% Similarity=0.057 Sum_probs=25.0
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHcccc
Q psy2692 78 KIQQCYQLTTSGKFVDAIEKLRNVLICIPLL 108 (133)
Q Consensus 78 ~Lk~gyk~~t~gKF~eAl~~Fr~iL~~i~l~ 108 (133)
....|.-+...|++++|+..|+..+...+-.
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 4456777788999999999999998876643
No 173
>1jwi_A Bitiscetin; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_A
Probab=20.51 E-value=1.2e+02 Score=19.40 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=32.1
Q ss_pred HHhcc-cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHH
Q psy2692 83 YQLTT-SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINI 125 (133)
Q Consensus 83 yk~~t-~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~i 125 (133)
|+.++ ...+.+|...+++. -.-|+.++|.+|.+.+.+++..
T Consensus 16 Y~~~~~~~~w~~A~~~C~~~--g~~La~i~s~~e~~~l~~~~~~ 57 (131)
T 1jwi_A 16 YKVFKKVGTWEDAEKFCVEN--SGHLASIDSKEEADFVTKLASQ 57 (131)
T ss_dssp EEEEEEEECHHHHHHHHHHT--TCEECCCCSHHHHHHHHHHHHH
T ss_pred EEEECCCcCHHHHHHHHHHc--CCeECccCCHHHHHHHHHHHhh
Confidence 44433 56799999999984 5688889999999988887754
No 174
>2bpd_A Dectin-1; receptor, beta-glucan, fungal recognition, C-type lectin-like domain, CTLD, carbohydrate; 1.5A {Mus musculus} PDB: 2bph_A 2bpe_A 2cl8_A*
Probab=20.21 E-value=1.1e+02 Score=20.27 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=33.2
Q ss_pred HHHhcc-cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHH
Q psy2692 82 CYQLTT-SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIIN 124 (133)
Q Consensus 82 gyk~~t-~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~ 124 (133)
+|+.++ ...+.+|...+++ +-.-|++++|.+|.+-+.+++.
T Consensus 28 CY~~~~~~~~w~~A~~~C~~--~g~~La~i~s~~e~~~l~~~~~ 69 (142)
T 2bpd_A 28 CYLFSFSGNSWYGSKRHCSQ--LGAHLLKIDNSKEFEFIESQTS 69 (142)
T ss_dssp EEEEEEEEECHHHHHHHHHH--TTCEECCCCSHHHHHHHHHHHG
T ss_pred EEEEECCCCCHHHHHHHHHH--cCCEEeeeCCHHHHHHHHHHHh
Confidence 455555 5589999999999 6788999999999888877764
No 175
>1j34_B Coagulation factor IX-binding protein B chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_B 1ixx_B* 1j35_B* 1x2t_B* 1x2w_B 1wt9_B 1iod_B 1y17_B
Probab=20.19 E-value=1e+02 Score=19.50 Aligned_cols=38 Identities=11% Similarity=-0.004 Sum_probs=30.6
Q ss_pred cCCHHHHHHHHHHHHHHcccccccChHHHHHHHHHHHH
Q psy2692 88 SGKFVDAIEKLRNVLICIPLLVVTTKKEIEEAKQIINI 125 (133)
Q Consensus 88 ~gKF~eAl~~Fr~iL~~i~l~vv~~~~e~~e~~eli~i 125 (133)
...+.+|...+++.-.-.-|+.++|.+|.+-+.+++..
T Consensus 20 ~~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~ 57 (123)
T 1j34_B 20 PKNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQ 57 (123)
T ss_dssp EECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHh
Confidence 55799999999985346778889999999988887754
Done!