Query psy2693
Match_columns 122
No_of_seqs 104 out of 167
Neff 3.9
Searched_HMMs 29240
Date Fri Aug 16 22:48:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2693.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2693hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkr_B Coatomer subunit alpha; 100.0 5.7E-43 1.9E-47 290.3 7.6 98 2-101 223-320 (320)
2 3mv2_A Coatomer subunit alpha; 100.0 1.7E-41 5.9E-46 282.2 7.6 93 2-96 232-324 (325)
3 6rxn_A Rubredoxin; electron tr 89.0 0.17 6E-06 31.0 1.6 27 57-83 4-40 (46)
4 3pwf_A Rubrerythrin; non heme 87.6 0.39 1.3E-05 35.8 3.1 27 55-82 136-162 (170)
5 1yk4_A Rubredoxin, RD; electro 85.6 0.48 1.6E-05 29.5 2.3 13 58-70 3-15 (52)
6 2v3b_B Rubredoxin 2, rubredoxi 85.6 0.5 1.7E-05 29.7 2.3 27 57-83 3-46 (55)
7 4rxn_A Rubredoxin; electron tr 84.9 0.54 1.8E-05 29.7 2.3 26 58-83 4-46 (54)
8 1dx8_A Rubredoxin; electron tr 83.9 0.63 2.2E-05 30.6 2.4 28 56-83 6-50 (70)
9 2jvm_A Uncharacterized protein 83.2 0.63 2.2E-05 31.8 2.2 16 54-69 50-65 (80)
10 4ayb_P DNA-directed RNA polyme 82.7 0.36 1.2E-05 30.4 0.7 14 55-68 21-34 (48)
11 2kn9_A Rubredoxin; metalloprot 81.0 0.91 3.1E-05 30.9 2.3 29 55-83 25-70 (81)
12 2jrr_A Uncharacterized protein 80.7 0.75 2.6E-05 30.4 1.8 16 55-70 38-53 (67)
13 1yuz_A Nigerythrin; rubrythrin 80.4 1.2 3.9E-05 34.0 3.0 26 56-82 170-195 (202)
14 2lcq_A Putative toxin VAPC6; P 80.3 0.84 2.9E-05 32.8 2.1 25 57-81 132-156 (165)
15 2jz8_A Uncharacterized protein 79.8 0.71 2.4E-05 32.0 1.5 17 54-70 45-61 (87)
16 1e8j_A Rubredoxin; iron-sulfur 79.7 1.3 4.3E-05 27.6 2.5 15 57-71 3-17 (52)
17 1lko_A Rubrerythrin all-iron(I 79.1 0.58 2E-05 35.1 0.9 26 57-82 155-180 (191)
18 1s24_A Rubredoxin 2; electron 78.3 0.94 3.2E-05 31.2 1.7 28 56-83 34-78 (87)
19 1pft_A TFIIB, PFTFIIBN; N-term 77.9 0.94 3.2E-05 26.9 1.5 26 57-82 5-33 (50)
20 2elx_A Zinc finger protein 406 73.1 2.3 7.8E-05 21.1 2.0 17 53-69 3-19 (35)
21 1vd4_A Transcription initiatio 70.6 3.4 0.00011 24.2 2.7 15 53-67 10-24 (62)
22 3k7a_M Transcription initiatio 69.5 2.8 9.4E-05 33.8 2.7 32 48-81 14-50 (345)
23 2odx_A Cytochrome C oxidase po 68.0 2.7 9.1E-05 28.3 2.0 28 46-74 42-73 (80)
24 2kdx_A HYPA, hydrogenase/ureas 66.2 4.5 0.00015 27.9 2.9 29 55-83 71-100 (119)
25 3j20_Y 30S ribosomal protein S 65.9 2.7 9.2E-05 25.8 1.5 29 56-84 18-48 (50)
26 2elp_A Zinc finger protein 406 65.9 4.6 0.00016 20.4 2.3 18 53-70 5-22 (37)
27 1p7a_A BF3, BKLF, kruppel-like 65.4 3.2 0.00011 21.0 1.6 18 52-69 6-23 (37)
28 1l8d_A DNA double-strand break 65.0 1.9 6.4E-05 29.1 0.7 14 57-70 47-60 (112)
29 2a6h_D DNA-directed RNA polyme 64.0 4.8 0.00016 39.6 3.6 62 16-82 15-79 (1524)
30 1srk_A Zinc finger protein ZFP 63.8 4.6 0.00016 20.1 2.0 17 53-69 3-19 (35)
31 2c2l_A CHIP, carboxy terminus 62.6 13 0.00046 27.3 5.1 38 40-81 207-251 (281)
32 1dl6_A Transcription factor II 62.3 4.4 0.00015 25.3 2.1 26 58-83 12-40 (58)
33 2elt_A Zinc finger protein 406 61.6 4.8 0.00016 20.0 1.9 17 53-69 5-21 (36)
34 2els_A Zinc finger protein 406 61.0 4.8 0.00016 20.2 1.8 16 54-69 6-21 (36)
35 2elo_A Zinc finger protein 406 60.5 3.9 0.00013 20.6 1.4 17 53-69 5-21 (37)
36 2elm_A Zinc finger protein 406 60.2 5.1 0.00017 20.6 1.8 17 53-69 5-21 (37)
37 2emi_A Zinc finger protein 484 60.2 6.1 0.00021 21.0 2.2 19 51-69 6-24 (46)
38 3h0g_L DNA-directed RNA polyme 58.6 4.6 0.00016 26.2 1.7 15 55-69 36-50 (63)
39 1ryq_A DNA-directed RNA polyme 58.4 7.9 0.00027 25.6 2.9 48 53-106 7-54 (69)
40 2apo_B Ribosome biogenesis pro 58.3 5.9 0.0002 25.5 2.2 26 56-85 5-30 (60)
41 2em4_A Zinc finger protein 28 58.1 7.1 0.00024 20.8 2.3 19 51-69 6-24 (46)
42 3a43_A HYPD, hydrogenase nicke 57.9 4 0.00014 29.3 1.5 30 55-84 68-118 (139)
43 2epc_A Zinc finger protein 32; 57.7 6.3 0.00022 20.4 1.9 18 52-69 6-23 (42)
44 2elv_A Zinc finger protein 406 57.3 6.3 0.00022 19.7 1.9 17 53-69 5-21 (36)
45 2elq_A Zinc finger protein 406 57.1 5.9 0.0002 19.9 1.7 16 54-69 6-21 (36)
46 2epz_A Zinc finger protein 28 56.0 6.3 0.00022 21.0 1.8 20 50-69 5-24 (46)
47 2elz_A Zinc finger protein 224 55.8 6.8 0.00023 20.9 1.9 20 50-69 5-24 (46)
48 2ept_A Zinc finger protein 32; 55.8 7.5 0.00026 20.1 2.0 17 53-69 6-22 (41)
49 2ene_A Zinc finger protein 347 55.7 8 0.00027 20.5 2.2 19 51-69 6-24 (46)
50 2kvh_A Zinc finger and BTB dom 54.4 6.7 0.00023 18.3 1.6 13 57-69 3-15 (27)
51 2yu5_A Zinc finger protein 473 54.3 10 0.00035 19.8 2.5 19 52-70 7-25 (44)
52 2emf_A Zinc finger protein 484 53.9 8.5 0.00029 20.5 2.1 19 51-69 6-24 (46)
53 2eoh_A Zinc finger protein 28 53.6 7.1 0.00024 20.8 1.7 19 51-69 6-24 (46)
54 2em2_A Zinc finger protein 28 53.5 9.6 0.00033 20.3 2.3 19 51-69 6-24 (46)
55 2emb_A Zinc finger protein 473 53.4 9.2 0.00032 20.1 2.2 19 51-69 6-24 (44)
56 2el5_A Zinc finger protein 268 53.2 8.2 0.00028 20.0 1.9 17 53-69 6-22 (42)
57 2ysp_A Zinc finger protein 224 52.8 7.4 0.00025 20.7 1.7 19 51-69 6-24 (46)
58 1gh9_A 8.3 kDa protein (gene M 52.8 7.1 0.00024 25.7 1.9 17 53-70 17-33 (71)
59 3iuf_A Zinc finger protein UBI 52.7 8.2 0.00028 21.3 2.0 17 53-69 3-19 (48)
60 2ytb_A Zinc finger protein 32; 52.6 6.7 0.00023 20.2 1.5 18 52-69 6-23 (42)
61 2elr_A Zinc finger protein 406 52.6 6.2 0.00021 19.6 1.3 17 53-69 5-21 (36)
62 2eoj_A Zinc finger protein 268 52.4 6.7 0.00023 20.5 1.5 19 51-69 6-24 (44)
63 2zjr_Z 50S ribosomal protein L 52.0 9.3 0.00032 24.2 2.3 24 55-81 28-51 (60)
64 2d9k_A FLN29 gene product; zin 51.7 3 0.0001 25.9 -0.1 14 55-68 41-54 (75)
65 2en2_A B-cell lymphoma 6 prote 51.1 8.9 0.0003 19.8 1.9 18 52-69 6-23 (42)
66 2yte_A Zinc finger protein 473 51.1 7.9 0.00027 20.0 1.7 17 53-69 6-22 (42)
67 2emg_A Zinc finger protein 484 51.1 8.6 0.00029 20.4 1.8 19 51-69 6-24 (46)
68 2ytm_A Zinc finger protein 28 50.6 7.4 0.00025 20.8 1.5 19 51-69 6-24 (46)
69 2en3_A ZFP-95, zinc finger pro 50.5 12 0.00041 19.8 2.4 19 52-70 7-25 (46)
70 2eof_A Zinc finger protein 268 50.5 9.4 0.00032 19.9 1.9 18 52-69 7-24 (44)
71 2emj_A Zinc finger protein 28 50.1 11 0.00039 19.9 2.3 19 51-69 6-24 (46)
72 2em7_A Zinc finger protein 224 50.0 12 0.00039 19.8 2.3 19 51-69 6-24 (46)
73 2yts_A Zinc finger protein 484 49.8 10 0.00035 20.0 2.0 18 52-69 7-24 (46)
74 2epv_A Zinc finger protein 268 49.6 13 0.00044 19.6 2.4 18 52-69 7-24 (44)
75 2yrj_A Zinc finger protein 473 49.4 12 0.00042 19.6 2.3 18 52-69 7-24 (46)
76 2enc_A Zinc finger protein 224 49.3 12 0.0004 19.8 2.2 19 51-69 6-24 (46)
77 2m0d_A Zinc finger and BTB dom 49.3 9.4 0.00032 17.6 1.6 13 57-69 3-15 (30)
78 2em8_A Zinc finger protein 224 49.2 12 0.00041 19.8 2.3 19 51-69 6-24 (46)
79 2eow_A Zinc finger protein 347 49.1 11 0.00036 19.9 2.0 18 52-69 7-24 (46)
80 1twf_L ABC10-alpha, DNA-direct 49.0 7.6 0.00026 25.4 1.6 11 56-66 44-54 (70)
81 2eoy_A Zinc finger protein 473 49.0 15 0.0005 19.5 2.6 18 52-69 7-24 (46)
82 3v2d_5 50S ribosomal protein L 48.9 11 0.00038 23.9 2.3 22 56-80 29-50 (60)
83 2kvf_A Zinc finger and BTB dom 48.8 9.5 0.00033 17.7 1.6 13 57-69 3-15 (28)
84 2enf_A Zinc finger protein 347 48.6 9.2 0.00031 20.3 1.7 18 52-69 7-24 (46)
85 2ytq_A Zinc finger protein 268 48.5 9.9 0.00034 20.2 1.8 19 51-69 6-24 (46)
86 2eor_A Zinc finger protein 224 48.4 12 0.00039 19.8 2.1 18 52-69 7-24 (46)
87 2ytp_A Zinc finger protein 484 48.4 13 0.00044 19.7 2.3 19 51-69 6-24 (46)
88 2em9_A Zinc finger protein 224 48.4 13 0.00044 19.5 2.3 19 51-69 6-24 (46)
89 2epw_A Zinc finger protein 268 48.2 16 0.00054 19.2 2.6 18 52-69 7-24 (46)
90 2enh_A Zinc finger protein 28 47.8 12 0.00043 19.8 2.2 20 51-70 6-25 (46)
91 2ely_A Zinc finger protein 224 47.8 13 0.00046 19.6 2.3 20 51-70 6-25 (46)
92 1njq_A Superman protein; zinc- 47.7 9.6 0.00033 19.5 1.6 16 54-69 3-18 (39)
93 2k4x_A 30S ribosomal protein S 47.6 6.9 0.00024 24.3 1.2 29 57-85 18-48 (55)
94 3irb_A Uncharacterized protein 47.6 8.2 0.00028 27.7 1.7 26 58-85 48-73 (145)
95 2aus_D NOP10, ribosome biogene 47.6 10 0.00035 24.4 2.0 26 56-85 4-29 (60)
96 2eml_A Zinc finger protein 28 47.5 13 0.00044 19.6 2.2 18 52-69 7-24 (46)
97 3pwf_A Rubrerythrin; non heme 47.4 6.2 0.00021 29.2 1.1 13 54-66 150-162 (170)
98 2eos_A B-cell lymphoma 6 prote 47.3 9.1 0.00031 19.9 1.5 18 52-69 6-23 (42)
99 2epx_A Zinc finger protein 28 47.1 12 0.00041 19.7 2.0 18 52-69 7-24 (47)
100 2kvg_A Zinc finger and BTB dom 47.0 8 0.00027 18.2 1.1 13 57-69 3-15 (27)
101 2ytg_A ZFP-95, zinc finger pro 47.0 15 0.00053 19.3 2.5 18 52-69 7-24 (46)
102 2ytj_A Zinc finger protein 484 46.9 13 0.00044 19.6 2.1 18 52-69 7-24 (46)
103 2yto_A Zinc finger protein 484 46.6 12 0.00041 19.8 2.0 18 52-69 7-24 (46)
104 2ytf_A Zinc finger protein 268 46.5 15 0.0005 19.3 2.3 18 52-69 7-24 (46)
105 2emh_A Zinc finger protein 484 46.5 14 0.00046 19.5 2.2 18 52-69 7-24 (46)
106 2eoz_A Zinc finger protein 473 46.3 11 0.00037 20.0 1.7 18 52-69 7-24 (46)
107 2eoo_A ZFP-95, zinc finger pro 46.1 14 0.00049 19.5 2.3 19 51-69 6-24 (46)
108 1v54_F VI, cytochrome C oxidas 45.8 8.1 0.00028 26.8 1.4 19 51-70 74-92 (98)
109 2eme_A Zinc finger protein 473 45.8 13 0.00044 19.6 2.0 18 52-69 7-24 (46)
110 2el4_A Zinc finger protein 268 45.8 15 0.00051 19.3 2.3 18 52-69 7-24 (46)
111 2eox_A Zinc finger protein 473 45.8 12 0.00042 19.5 1.9 19 52-70 7-25 (44)
112 2eq1_A Zinc finger protein 347 45.5 11 0.00037 20.0 1.7 18 52-69 7-24 (46)
113 2zet_C Melanophilin; complex, 45.4 7.2 0.00024 28.7 1.1 41 40-82 70-117 (153)
114 3lu0_D DNA-directed RNA polyme 45.3 22 0.00074 34.9 4.6 64 16-84 27-93 (1407)
115 2yso_A ZFP-95, zinc finger pro 45.3 14 0.00049 19.4 2.1 19 51-69 6-24 (46)
116 2ep2_A Zinc finger protein 484 45.1 13 0.00045 19.6 2.0 18 52-69 7-24 (46)
117 1yuz_A Nigerythrin; rubrythrin 45.1 7.5 0.00026 29.4 1.2 15 52-66 181-195 (202)
118 2ep3_A Zinc finger protein 484 44.7 15 0.00052 19.3 2.2 18 52-69 7-24 (46)
119 2eq4_A Zinc finger protein 224 44.7 11 0.00039 19.8 1.7 18 52-69 7-24 (46)
120 2eou_A Zinc finger protein 473 44.6 11 0.00038 19.8 1.6 18 52-69 7-24 (44)
121 2em3_A Zinc finger protein 28 44.6 15 0.00052 19.3 2.2 18 52-69 7-24 (46)
122 3uk3_C Zinc finger protein 217 44.4 7.5 0.00026 21.4 0.9 15 54-68 1-15 (57)
123 2yu8_A Zinc finger protein 347 44.3 17 0.00059 19.1 2.4 19 52-70 7-25 (46)
124 2ema_A Zinc finger protein 347 44.2 15 0.00052 19.3 2.2 18 52-69 7-24 (46)
125 2en6_A Zinc finger protein 268 44.2 12 0.00041 19.8 1.7 19 51-69 6-24 (46)
126 2epu_A Zinc finger protein 32; 44.2 13 0.00043 19.7 1.8 18 52-69 7-24 (45)
127 2en8_A Zinc finger protein 224 44.1 16 0.00055 19.2 2.2 18 52-69 7-24 (46)
128 2yti_A Zinc finger protein 347 44.1 9.9 0.00034 20.1 1.3 18 52-69 7-24 (46)
129 2ep1_A Zinc finger protein 484 43.9 12 0.0004 19.7 1.7 18 52-69 7-24 (46)
130 2el6_A Zinc finger protein 268 43.7 16 0.00056 19.3 2.3 18 52-69 7-24 (46)
131 2eov_A Zinc finger protein 484 43.6 13 0.00046 19.5 1.8 17 53-69 8-24 (46)
132 3o9x_A Uncharacterized HTH-typ 43.4 4 0.00014 27.5 -0.5 14 72-85 35-48 (133)
133 2emy_A Zinc finger protein 268 43.3 14 0.00049 19.4 1.9 18 52-69 7-24 (46)
134 2eop_A Zinc finger protein 268 43.3 14 0.00047 19.4 1.9 18 52-69 7-24 (46)
135 1yui_A GAGA-factor; complex (D 43.2 11 0.00039 20.9 1.6 18 52-69 19-36 (54)
136 2emz_A ZFP-95, zinc finger pro 43.1 13 0.00043 19.7 1.7 18 52-69 7-24 (46)
137 2eon_A ZFP-95, zinc finger pro 43.0 13 0.00044 19.8 1.7 18 52-69 7-24 (46)
138 2eq0_A Zinc finger protein 347 43.0 13 0.00043 19.7 1.7 18 52-69 7-24 (46)
139 2eq3_A Zinc finger protein 347 42.8 10 0.00036 20.0 1.3 18 52-69 7-24 (46)
140 2ytk_A Zinc finger protein 347 42.7 17 0.00057 19.2 2.2 18 52-69 7-24 (46)
141 2ytd_A Zinc finger protein 473 42.4 18 0.00063 19.0 2.3 18 52-69 7-24 (46)
142 2en7_A Zinc finger protein 268 42.3 12 0.00042 19.4 1.5 17 53-69 8-24 (44)
143 2yth_A Zinc finger protein 224 42.3 13 0.00043 19.7 1.6 18 52-69 7-24 (46)
144 2emx_A Zinc finger protein 268 42.0 15 0.00052 19.1 1.9 17 53-69 6-22 (44)
145 2ytn_A Zinc finger protein 347 42.0 13 0.00043 19.7 1.6 18 52-69 7-24 (46)
146 2em6_A Zinc finger protein 224 41.8 15 0.00052 19.4 1.9 18 52-69 7-24 (46)
147 2m0e_A Zinc finger and BTB dom 41.6 12 0.0004 17.1 1.3 12 58-69 3-14 (29)
148 2emp_A Zinc finger protein 347 41.5 16 0.00056 19.2 2.0 18 52-69 7-24 (46)
149 1vq8_Z 50S ribosomal protein L 41.2 10 0.00034 25.5 1.2 30 56-85 26-57 (83)
150 2ytr_A Zinc finger protein 347 40.5 13 0.00044 19.6 1.4 18 52-69 7-24 (46)
151 2en1_A Zinc finger protein 224 40.4 14 0.00047 19.5 1.6 18 52-69 7-24 (46)
152 2en9_A Zinc finger protein 28 40.4 15 0.00051 19.4 1.7 18 52-69 7-24 (46)
153 2em5_A ZFP-95, zinc finger pro 40.3 20 0.00068 18.9 2.3 17 53-69 8-24 (46)
154 2emk_A Zinc finger protein 28 40.3 16 0.00053 19.4 1.8 18 52-69 7-24 (46)
155 2eps_A POZ-, at HOOK-, and zin 39.9 16 0.00053 20.4 1.8 15 54-68 38-52 (54)
156 2emm_A ZFP-95, zinc finger pro 39.9 21 0.00073 18.6 2.3 17 53-69 8-24 (46)
157 2m0f_A Zinc finger and BTB dom 39.5 13 0.00044 17.0 1.2 12 58-69 3-14 (29)
158 2em0_A Zinc finger protein 224 39.5 17 0.00057 19.2 1.8 18 52-69 7-24 (46)
159 2ctd_A Zinc finger protein 512 39.4 14 0.00048 23.7 1.7 13 55-67 32-44 (96)
160 2eoq_A Zinc finger protein 224 39.2 12 0.0004 19.8 1.1 17 53-69 8-24 (46)
161 2eq2_A Zinc finger protein 347 39.2 11 0.00038 19.9 1.0 17 53-69 8-24 (46)
162 2drp_A Protein (tramtrack DNA- 39.0 15 0.00051 20.8 1.6 16 54-69 37-52 (66)
163 1ard_A Yeast transcription fac 38.7 12 0.00041 17.2 1.0 12 58-69 3-14 (29)
164 1rik_A E6APC1 peptide; E6-bind 38.4 19 0.00063 16.6 1.7 12 58-69 3-14 (29)
165 2ytt_A Zinc finger protein 473 37.9 14 0.00048 19.6 1.3 17 53-69 8-24 (46)
166 1bbo_A Human enhancer-binding 37.5 17 0.00057 19.9 1.7 17 53-69 25-41 (57)
167 2f42_A STIP1 homology and U-bo 37.4 30 0.001 25.9 3.5 60 11-80 82-148 (179)
168 1klr_A Zinc finger Y-chromosom 37.3 15 0.0005 16.9 1.2 12 58-69 3-14 (30)
169 2k5c_A Uncharacterized protein 37.2 13 0.00046 25.9 1.4 13 56-68 7-19 (95)
170 2dmi_A Teashirt homolog 3; zin 37.0 24 0.00082 22.1 2.6 10 58-67 51-60 (115)
171 1znf_A 31ST zinc finger from X 37.0 13 0.00043 17.0 0.9 12 58-69 2-13 (27)
172 2yrk_A Zinc finger homeobox pr 37.0 14 0.00049 23.6 1.4 17 55-71 11-27 (55)
173 2eom_A ZFP-95, zinc finger pro 37.0 16 0.00056 19.3 1.5 17 53-69 8-24 (46)
174 3na7_A HP0958; flagellar bioge 36.7 5.4 0.00019 30.7 -0.7 26 43-68 200-233 (256)
175 2gnr_A Conserved hypothetical 36.3 16 0.00053 26.4 1.7 25 58-84 48-72 (145)
176 2ep0_A Zinc finger protein 28 36.0 26 0.00088 18.4 2.3 18 52-69 7-24 (46)
177 2eoe_A Zinc finger protein 347 36.0 15 0.00053 19.2 1.3 18 52-69 7-24 (46)
178 2kae_A GATA-type transcription 36.0 14 0.00046 24.4 1.2 29 54-82 5-39 (71)
179 2yrm_A B-cell lymphoma 6 prote 35.6 19 0.00064 18.9 1.6 17 53-69 6-22 (43)
180 1f2i_G Fusion of N-terminal 17 35.5 18 0.00063 20.8 1.7 27 43-69 26-61 (73)
181 1x6e_A Zinc finger protein 24; 35.0 26 0.00088 20.3 2.3 16 52-67 9-24 (72)
182 2y69_F Cytochrome C oxidase su 34.5 15 0.00052 26.8 1.4 19 51-70 105-123 (129)
183 2adr_A ADR1; transcription reg 34.3 19 0.00065 19.9 1.6 17 53-69 26-42 (60)
184 1fv5_A First zinc finger of U- 32.8 17 0.00057 20.1 1.1 17 53-69 4-20 (36)
185 4bbr_M Transcription initiatio 32.6 12 0.00043 30.2 0.7 26 57-82 21-51 (345)
186 2ee8_A Protein ODD-skipped-rel 32.5 34 0.0012 20.9 2.7 15 53-67 41-55 (106)
187 1vzy_A 33 kDa chaperonin; chap 32.5 13 0.00044 29.7 0.8 15 54-68 262-276 (291)
188 1hqm_D DNA-directed RNA polyme 32.2 19 0.00064 34.8 1.9 61 19-84 18-81 (1265)
189 2gmg_A Hypothetical protein PF 32.1 18 0.00062 25.6 1.4 13 55-67 82-94 (105)
190 2lvr_A Zinc finger and BTB dom 38.2 9.7 0.00033 17.7 0.0 12 58-69 4-15 (30)
191 1paa_A Yeast transcription fac 31.9 21 0.00073 16.5 1.3 12 58-69 3-14 (30)
192 2lvu_A Zinc finger and BTB dom 38.1 9.8 0.00033 17.5 0.0 13 58-70 3-15 (26)
193 2lce_A B-cell lymphoma 6 prote 31.6 22 0.00074 20.7 1.6 15 53-67 13-27 (74)
194 2eod_A TNF receptor-associated 31.5 24 0.00082 20.2 1.7 14 55-68 8-21 (66)
195 2ct1_A Transcriptional repress 31.5 31 0.0011 20.1 2.3 17 52-68 10-26 (77)
196 3k1f_M Transcription initiatio 30.7 18 0.00061 28.3 1.3 28 55-82 19-51 (197)
197 1gnf_A Transcription factor GA 30.4 23 0.0008 21.3 1.5 27 55-81 2-33 (46)
198 2epq_A POZ-, at HOOK-, and zin 30.2 19 0.00066 18.9 1.1 15 54-68 7-21 (45)
199 2d9h_A Zinc finger protein 692 29.9 26 0.00089 20.5 1.7 15 54-68 4-18 (78)
200 1p91_A Ribosomal RNA large sub 28.9 14 0.00049 26.8 0.5 27 58-84 3-29 (269)
201 1vq0_A 33 kDa chaperonin; TM13 28.6 20 0.00069 28.9 1.3 15 53-68 269-283 (302)
202 2ct2_A Tripartite motif protei 28.5 35 0.0012 20.8 2.2 8 74-81 57-64 (88)
203 1x5w_A Zinc finger protein 64, 28.3 31 0.0011 19.7 1.9 15 54-68 6-20 (70)
204 2lvt_A Zinc finger and BTB dom 34.3 12 0.00042 17.4 0.0 12 58-69 3-14 (29)
205 2ghf_A ZHX1, zinc fingers and 28.0 29 0.00098 23.0 1.8 16 53-68 14-29 (102)
206 1i7f_A Heat shock protein 33; 27.7 13 0.00044 29.8 0.0 16 53-68 256-271 (292)
207 2epr_A POZ-, at HOOK-, and zin 27.5 28 0.00095 18.6 1.4 16 53-68 8-23 (48)
208 1va1_A Transcription factor SP 27.5 37 0.0012 17.0 1.9 17 53-69 4-22 (37)
209 2jrp_A Putative cytoplasmic pr 27.1 21 0.00071 24.2 1.0 23 55-80 16-38 (81)
210 2ctu_A Zinc finger protein 483 26.7 42 0.0014 18.8 2.2 30 52-81 13-47 (73)
211 2row_A RHO-associated protein 26.6 1.1E+02 0.0036 20.4 4.5 43 39-82 18-63 (84)
212 2k2d_A Ring finger and CHY zin 26.1 29 0.001 22.8 1.6 36 46-81 25-63 (79)
213 3jyw_9 60S ribosomal protein L 26.0 38 0.0013 22.4 2.1 30 56-85 25-56 (72)
214 2yt9_A Zinc finger-containing 26.0 36 0.0012 20.3 1.9 15 54-68 4-18 (95)
215 2dlk_A Novel protein; ZF-C2H2 25.7 25 0.00085 20.4 1.1 14 54-67 65-78 (79)
216 3v43_A Histone acetyltransfera 25.2 20 0.00069 24.3 0.7 21 53-73 22-42 (112)
217 4gzn_C ZFP-57, zinc finger pro 25.0 35 0.0012 20.4 1.7 17 53-69 28-44 (60)
218 1h7b_A Anaerobic ribonucleotid 24.6 19 0.00064 31.8 0.5 8 73-80 558-565 (605)
219 3gmt_A Adenylate kinase; ssgci 24.6 32 0.0011 26.4 1.8 25 56-80 130-158 (230)
220 1x6a_A LIMK-2, LIM domain kina 24.6 63 0.0021 19.7 2.9 33 43-81 17-49 (81)
221 2kfq_A FP1; protein, de novo p 24.5 19 0.00066 17.6 0.3 11 58-68 3-13 (32)
222 2lv2_A Insulinoma-associated p 24.3 34 0.0012 21.9 1.6 28 42-69 32-68 (85)
223 3mhs_C SAGA-associated factor 24.2 1E+02 0.0034 21.6 4.1 40 26-67 41-80 (99)
224 3r4i_A Citrate lyase; TIM beta 24.1 70 0.0024 25.7 3.8 28 6-33 266-293 (339)
225 2kmk_A Zinc finger protein GFI 23.5 38 0.0013 19.5 1.6 16 53-68 53-68 (82)
226 2cot_A Zinc finger protein 435 23.4 35 0.0012 19.9 1.5 16 53-68 14-29 (77)
227 1rim_A E6APC2 peptide; E6-bind 23.3 28 0.00097 17.1 0.9 12 58-69 3-14 (33)
228 2kre_A Ubiquitin conjugation f 23.1 33 0.0011 22.8 1.4 45 33-81 21-71 (100)
229 1a1h_A QGSR zinc finger peptid 22.6 42 0.0014 19.7 1.7 15 54-68 59-73 (90)
230 1iym_A EL5; ring-H2 finger, ub 22.2 87 0.003 17.3 3.0 37 44-80 8-50 (55)
231 1x6h_A Transcriptional repress 21.9 51 0.0017 19.1 2.0 18 51-68 9-26 (86)
232 1llm_C Chimera of ZIF23-GCN4; 21.7 44 0.0015 20.0 1.7 17 53-69 27-43 (88)
233 3d00_A Tungsten formylmethanof 21.7 37 0.0013 25.5 1.6 25 55-80 161-185 (191)
234 3fb4_A Adenylate kinase; psych 21.6 48 0.0017 23.1 2.1 30 56-85 126-159 (216)
235 1bhi_A CRE-BP1, ATF-2; CRE bin 21.3 51 0.0017 16.3 1.7 16 54-69 3-20 (38)
236 2gqj_A Zinc finger protein KIA 21.2 38 0.0013 21.1 1.4 17 52-68 19-35 (98)
237 2ds5_A CLPX, ATP-dependent CLP 20.7 37 0.0013 20.8 1.2 11 57-67 11-21 (51)
238 2dlq_A GLI-kruppel family memb 20.6 40 0.0014 21.0 1.3 15 54-68 4-18 (124)
239 2aee_A OPRT, oprtase, orotate 20.0 67 0.0023 23.4 2.7 34 16-53 6-39 (211)
No 1
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=100.00 E-value=5.7e-43 Score=290.34 Aligned_cols=98 Identities=44% Similarity=0.821 Sum_probs=96.3
Q ss_pred cccccCCChHHHHHHHHHHHHHhcCCCCceeecCCCCCCeeeecccceeccCCCcceecCCCCceecCCCCCcccCcccc
Q psy2693 2 EILAKFQIIPVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRESEACVYCGASYLPKYKGELCAVCTV 81 (122)
Q Consensus 2 ~lLel~p~~~va~qArKIl~~ce~~~tDa~eIdYD~~npF~ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~kG~lC~VC~l 81 (122)
+|||++|++++++|||||+++|||+|+|+|+||||++|||+||++||||||+|+++|+||||||+|+|+|||++|+||+|
T Consensus 223 rLLel~p~~~~~~qArkil~~ce~~~~da~eidyD~~~~f~iCa~s~tPIY~g~~~v~Cp~cgA~y~~~~kG~lC~vC~l 302 (320)
T 3mkr_B 223 RLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICKVTTV 302 (320)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHHSCCBSSCCSCCTTSCCCBBTTTCCBCCTTSCCEECTTTCCEECGGGTTSBCTTTSS
T ss_pred HHHhcCCCHHHHHHHHHHHHHHhcCCCCccccCCCCCCccceecCCCccccCCCCCccCCCCCCeechhhCCCCCCCCcC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCcceecccch
Q psy2693 82 SVIDTHRNAYGLQICAGLMK 101 (122)
Q Consensus 82 s~IG~~~~a~GLr~~~~~~~ 101 (122)
++|| ++++|||++..|+|
T Consensus 303 ~~IG--~~~~GL~~~~~~~~ 320 (320)
T 3mkr_B 303 TEIG--KDVIGLRISPLQFR 320 (320)
T ss_dssp BBSS--CCCCCCCCSGGGCC
T ss_pred cccC--CcccCccccccccC
Confidence 9999 99999999988886
No 2
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=100.00 E-value=1.7e-41 Score=282.16 Aligned_cols=93 Identities=32% Similarity=0.467 Sum_probs=91.6
Q ss_pred cccccCCChHHHHHHHHHHHHHhcCCCCceeecCCCCCCeeeecccceeccCCCcceecCCCCceecCCCCCcccCcccc
Q psy2693 2 EILAKFQIIPVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRESEACVYCGASYLPKYKGELCAVCTV 81 (122)
Q Consensus 2 ~lLel~p~~~va~qArKIl~~ce~~~tDa~eIdYD~~npF~ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~kG~lC~VC~l 81 (122)
+||+++|++++++|||||+++|||+|+|+++||||++|||+||++||||||+|+++|+||||||+|+|+|||++|+||+|
T Consensus 232 rLLel~p~~~~a~qArkil~~ce~~~~Da~eidyD~~~~F~iCa~s~tPIY~g~~~v~Cp~cgA~y~~~~kG~lC~vC~l 311 (325)
T 3mv2_A 232 EFLKIISSGPRAEQARKIKNKADSMASDAIPIDFDPYAKFDICAATYKPIYEDTPSVSDPLTGSKYVITEKDKIDRIAMI 311 (325)
T ss_dssp HHHTTCCSSHHHHHHHHHHHHHHTSCCCSSCCSCCTTSCEEECTTTCCEEESSSCEEECTTTCCEEEGGGTTSBCSSSSC
T ss_pred HHHhcCCCHHHHHHHHHHHHHHhcCCCCccccCCCCCCCceeecCCcccccCCCCCccCCCCCCeechhhCCCCCCCCcC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccee
Q psy2693 82 SVIDTHRNAYGLQIC 96 (122)
Q Consensus 82 s~IG~~~~a~GLr~~ 96 (122)
++|| ++++|||++
T Consensus 312 ~~IG--~~a~GL~~~ 324 (325)
T 3mv2_A 312 SKIG--APASGLRIR 324 (325)
T ss_dssp BBTT--CCCCCCCCB
T ss_pred cccC--CCccceeee
Confidence 9999 999999986
No 3
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=88.99 E-value=0.17 Score=31.05 Aligned_cols=27 Identities=37% Similarity=0.673 Sum_probs=19.3
Q ss_pred ceecCCCCceecCCCCC----------cccCccccee
Q psy2693 57 SEACVYCGASYLPKYKG----------ELCAVCTVSV 83 (122)
Q Consensus 57 ~v~CP~CgA~Y~p~~kG----------~lC~VC~ls~ 83 (122)
..+|+.||-.|.|+.-. -.|++|+..+
T Consensus 4 ~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~k 40 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSK 40 (46)
T ss_dssp CEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCBG
T ss_pred EEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCcH
Confidence 35899999999875311 1799998754
No 4
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=87.55 E-value=0.39 Score=35.83 Aligned_cols=27 Identities=26% Similarity=0.662 Sum_probs=20.0
Q ss_pred CcceecCCCCceecCCCCCcccCcccce
Q psy2693 55 RESEACVYCGASYLPKYKGELCAVCTVS 82 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~~kG~lC~VC~ls 82 (122)
.....|+.||-.|.++ .-..||+|+..
T Consensus 136 ~~~~~C~~CG~i~~~~-~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYICPICGYTAVDE-APEYCPVCGAP 162 (170)
T ss_dssp SCEEECTTTCCEEESC-CCSBCTTTCCB
T ss_pred CCeeEeCCCCCeeCCC-CCCCCCCCCCC
Confidence 4556799999999865 34489999854
No 5
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=85.65 E-value=0.48 Score=29.50 Aligned_cols=13 Identities=31% Similarity=0.649 Sum_probs=10.6
Q ss_pred eecCCCCceecCC
Q psy2693 58 EACVYCGASYLPK 70 (122)
Q Consensus 58 v~CP~CgA~Y~p~ 70 (122)
.+|+.||-.|.|+
T Consensus 3 ~~C~~CGyvYd~~ 15 (52)
T 1yk4_A 3 LSCKICGYIYDED 15 (52)
T ss_dssp EEESSSSCEEETT
T ss_pred EEeCCCCeEECCC
Confidence 5788899888875
No 6
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=85.58 E-value=0.5 Score=29.75 Aligned_cols=27 Identities=30% Similarity=0.566 Sum_probs=19.1
Q ss_pred ceecCCCCceecCCC---------------CCc--ccCccccee
Q psy2693 57 SEACVYCGASYLPKY---------------KGE--LCAVCTVSV 83 (122)
Q Consensus 57 ~v~CP~CgA~Y~p~~---------------kG~--lC~VC~ls~ 83 (122)
..+|+.||-.|.|+. --. .|++|+..+
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~K 46 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGK 46 (55)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCCG
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCCH
Confidence 357899999998764 112 788888754
No 7
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=84.87 E-value=0.54 Score=29.71 Aligned_cols=26 Identities=31% Similarity=0.703 Sum_probs=19.3
Q ss_pred eecCCCCceecCCCC-----------------CcccCccccee
Q psy2693 58 EACVYCGASYLPKYK-----------------GELCAVCTVSV 83 (122)
Q Consensus 58 v~CP~CgA~Y~p~~k-----------------G~lC~VC~ls~ 83 (122)
.+|+.||-.|.|+.- .-+|++|+..+
T Consensus 4 y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~K 46 (54)
T 4rxn_A 4 YTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVGK 46 (54)
T ss_dssp EEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCBG
T ss_pred eECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCcH
Confidence 579999999988641 12799998765
No 8
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=83.93 E-value=0.63 Score=30.62 Aligned_cols=28 Identities=25% Similarity=0.649 Sum_probs=20.4
Q ss_pred cceecCCCCceecCCC---------------CCc--ccCccccee
Q psy2693 56 ESEACVYCGASYLPKY---------------KGE--LCAVCTVSV 83 (122)
Q Consensus 56 ~~v~CP~CgA~Y~p~~---------------kG~--lC~VC~ls~ 83 (122)
...+|+.||-.|.|+- --. .|++|+..+
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~K 50 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSPK 50 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCBG
T ss_pred ceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCCH
Confidence 3568999999998764 112 799998754
No 9
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=83.16 E-value=0.63 Score=31.83 Aligned_cols=16 Identities=25% Similarity=0.621 Sum_probs=13.1
Q ss_pred CCcceecCCCCceecC
Q psy2693 54 GRESEACVYCGASYLP 69 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~p 69 (122)
....+.|||||..|.-
T Consensus 50 ~~g~~~CpYCg~~f~l 65 (80)
T 2jvm_A 50 ETGFVECGYCDRRYIH 65 (80)
T ss_dssp TTCEEECSSSSCEEEE
T ss_pred CCCeEECCCCCCEEEe
Confidence 3568999999999963
No 10
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=82.66 E-value=0.36 Score=30.38 Aligned_cols=14 Identities=29% Similarity=0.733 Sum_probs=11.2
Q ss_pred CcceecCCCCceec
Q psy2693 55 RESEACVYCGASYL 68 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~ 68 (122)
-|.++|||||-+..
T Consensus 21 lP~IrCpyCGyrii 34 (48)
T 4ayb_P 21 LPGVRCPYCGYKII 34 (48)
T ss_dssp CSSSCCTTTCCSCE
T ss_pred CCCcccCccCcEEE
Confidence 48899999997643
No 11
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=80.98 E-value=0.91 Score=30.90 Aligned_cols=29 Identities=21% Similarity=0.403 Sum_probs=21.7
Q ss_pred CcceecCCCCceecCCC---------------C--CcccCccccee
Q psy2693 55 RESEACVYCGASYLPKY---------------K--GELCAVCTVSV 83 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~~---------------k--G~lC~VC~ls~ 83 (122)
....+|+.||-.|.|+. - .-.|++|+..+
T Consensus 25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K 70 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAK 70 (81)
T ss_dssp CCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCCG
T ss_pred cceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCCH
Confidence 34689999999999854 1 22799998754
No 12
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=80.72 E-value=0.75 Score=30.39 Aligned_cols=16 Identities=31% Similarity=0.708 Sum_probs=13.7
Q ss_pred CcceecCCCCceecCC
Q psy2693 55 RESEACVYCGASYLPK 70 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~ 70 (122)
...+.|||||..|.-+
T Consensus 38 ~g~~~CpYCg~~f~l~ 53 (67)
T 2jrr_A 38 TGWVECPYCDCKYVLK 53 (67)
T ss_dssp TSEEEETTTTEEEEET
T ss_pred CCeEECCCCCCEEEEC
Confidence 5789999999999755
No 13
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=80.42 E-value=1.2 Score=33.97 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=17.5
Q ss_pred cceecCCCCceecCCCCCcccCcccce
Q psy2693 56 ESEACVYCGASYLPKYKGELCAVCTVS 82 (122)
Q Consensus 56 ~~v~CP~CgA~Y~p~~kG~lC~VC~ls 82 (122)
....|+.||-.|.. -.-..||+|+..
T Consensus 170 ~~~~C~~CG~i~~g-~~p~~CP~C~~~ 195 (202)
T 1yuz_A 170 KFHLCPICGYIHKG-EDFEKCPICFRP 195 (202)
T ss_dssp CEEECSSSCCEEES-SCCSBCTTTCCB
T ss_pred cEEEECCCCCEEcC-cCCCCCCCCCCC
Confidence 45678888888765 223578888754
No 14
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=80.31 E-value=0.84 Score=32.85 Aligned_cols=25 Identities=24% Similarity=0.648 Sum_probs=21.4
Q ss_pred ceecCCCCceecCCCCCcccCcccc
Q psy2693 57 SEACVYCGASYLPKYKGELCAVCTV 81 (122)
Q Consensus 57 ~v~CP~CgA~Y~p~~kG~lC~VC~l 81 (122)
..+|+-||..|.....+..|+.|+-
T Consensus 132 ~y~C~~Cg~~~~~~~~~~~Cp~CG~ 156 (165)
T 2lcq_A 132 RYVCIGCGRKFSTLPPGGVCPDCGS 156 (165)
T ss_dssp CEEESSSCCEESSCCGGGBCTTTCC
T ss_pred EEECCCCCCcccCCCCCCcCCCCCC
Confidence 5789999999987766789999984
No 15
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=79.80 E-value=0.71 Score=32.05 Aligned_cols=17 Identities=24% Similarity=0.675 Sum_probs=13.9
Q ss_pred CCcceecCCCCceecCC
Q psy2693 54 GRESEACVYCGASYLPK 70 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~p~ 70 (122)
....+.|||||..|.-+
T Consensus 45 ~~g~~~CpYCg~~y~~~ 61 (87)
T 2jz8_A 45 STDEKICPYCSTLYRYD 61 (87)
T ss_dssp TCCEECCTTTCCEEECC
T ss_pred CCCeEECCCCCCEeEcC
Confidence 45789999999999743
No 16
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=79.67 E-value=1.3 Score=27.57 Aligned_cols=15 Identities=33% Similarity=0.689 Sum_probs=11.2
Q ss_pred ceecCCCCceecCCC
Q psy2693 57 SEACVYCGASYLPKY 71 (122)
Q Consensus 57 ~v~CP~CgA~Y~p~~ 71 (122)
..+|+.||-.|.|+.
T Consensus 3 ~y~C~~CGyvYd~~~ 17 (52)
T 1e8j_A 3 IYVCTVCGYEYDPAK 17 (52)
T ss_dssp CEECSSSCCCCCTTT
T ss_pred cEEeCCCCeEEcCCc
Confidence 357888888888764
No 17
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=79.07 E-value=0.58 Score=35.07 Aligned_cols=26 Identities=27% Similarity=0.459 Sum_probs=15.9
Q ss_pred ceecCCCCceecCCCCCcccCcccce
Q psy2693 57 SEACVYCGASYLPKYKGELCAVCTVS 82 (122)
Q Consensus 57 ~v~CP~CgA~Y~p~~kG~lC~VC~ls 82 (122)
...|+.||-.|.-+-.-..||+|+..
T Consensus 155 ~~~C~~CG~~~~g~~~p~~CP~C~~~ 180 (191)
T 1lko_A 155 KWRCRNCGYVHEGTGAPELCPACAHP 180 (191)
T ss_dssp EEEETTTCCEEEEEECCSBCTTTCCB
T ss_pred eEEECCCCCEeeCCCCCCCCCCCcCC
Confidence 45788888877421112378888764
No 18
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=78.28 E-value=0.94 Score=31.20 Aligned_cols=28 Identities=21% Similarity=0.414 Sum_probs=19.8
Q ss_pred cceecCCCCceecCCC---------------C--CcccCccccee
Q psy2693 56 ESEACVYCGASYLPKY---------------K--GELCAVCTVSV 83 (122)
Q Consensus 56 ~~v~CP~CgA~Y~p~~---------------k--G~lC~VC~ls~ 83 (122)
...+|+.||-.|.|+. - .-.|++|+..+
T Consensus 34 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K 78 (87)
T 1s24_A 34 LKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATK 78 (87)
T ss_dssp CEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCCG
T ss_pred ceEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCCCH
Confidence 4578999999998852 1 12799998654
No 19
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=77.94 E-value=0.94 Score=26.95 Aligned_cols=26 Identities=27% Similarity=0.635 Sum_probs=18.5
Q ss_pred ceecCCCCc-e--ecCCCCCcccCcccce
Q psy2693 57 SEACVYCGA-S--YLPKYKGELCAVCTVS 82 (122)
Q Consensus 57 ~v~CP~CgA-~--Y~p~~kG~lC~VC~ls 82 (122)
...||.||+ . |.++-..-+|..|++.
T Consensus 5 ~~~CP~C~~~~l~~d~~~gelvC~~CG~v 33 (50)
T 1pft_A 5 QKVCPACESAELIYDPERGEIVCAKCGYV 33 (50)
T ss_dssp CCSCTTTSCCCEEEETTTTEEEESSSCCB
T ss_pred cEeCcCCCCcceEEcCCCCeEECcccCCc
Confidence 457999988 4 5565555688888873
No 20
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=73.11 E-value=2.3 Score=21.12 Aligned_cols=17 Identities=18% Similarity=0.587 Sum_probs=13.3
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|+.||..|..
T Consensus 3 ~~~k~~~C~~C~k~f~~ 19 (35)
T 2elx_A 3 SGSSGYVCALCLKKFVS 19 (35)
T ss_dssp CCCCSEECSSSCCEESS
T ss_pred CCCCCeECCCCcchhCC
Confidence 46667899999998764
No 21
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=70.57 E-value=3.4 Score=24.23 Aligned_cols=15 Identities=27% Similarity=0.687 Sum_probs=9.0
Q ss_pred CCCcceecCCCCcee
Q psy2693 53 HGRESEACVYCGASY 67 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y 67 (122)
.|.....|+.||..|
T Consensus 10 ~~~k~~~C~~C~k~F 24 (62)
T 1vd4_A 10 TNRASFKCPVCSSTF 24 (62)
T ss_dssp CSSSEEECSSSCCEE
T ss_pred CCCCCccCCCCCchh
Confidence 355556677776654
No 22
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=69.52 E-value=2.8 Score=33.77 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=19.1
Q ss_pred ceeccCCCcceecCCCCce---ec--CCCCCcccCcccc
Q psy2693 48 YTPIYHGRESEACVYCGAS---YL--PKYKGELCAVCTV 81 (122)
Q Consensus 48 ~tPIY~G~~~v~CP~CgA~---Y~--p~~kG~lC~VC~l 81 (122)
|.| .-.....||.||+. .. .+--..+|.-|++
T Consensus 14 ~~~--~~~~~~~Cp~Cg~~~~~iv~D~~~G~~vC~~CG~ 50 (345)
T 3k7a_M 14 RGP--NLNIVLTCPECKVYPPKIVERFSEGDVVCALCGL 50 (345)
T ss_dssp -----CCCCCCCCSTTCCSCCCCCCCSSSCSCCCSSSCC
T ss_pred cCc--cccCCCcCcCCCCCCCceEEECCCCCEecCCCCe
Confidence 555 33456679999884 32 3333668999987
No 23
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=68.03 E-value=2.7 Score=28.31 Aligned_cols=28 Identities=29% Similarity=0.339 Sum_probs=20.9
Q ss_pred ccceec----cCCCcceecCCCCceecCCCCCc
Q psy2693 46 RSYTPI----YHGRESEACVYCGASYLPKYKGE 74 (122)
Q Consensus 46 ~S~tPI----Y~G~~~v~CP~CgA~Y~p~~kG~ 74 (122)
.+...+ .+| +..+||.||..|+-++.|.
T Consensus 42 d~h~v~W~~l~~g-~~~RC~eCG~~fkL~~vg~ 73 (80)
T 2odx_A 42 GSHTIMWLKPTVN-EVARCWECGSVYKLNPVGV 73 (80)
T ss_dssp CCSCCEEECCCTT-CEEECSSSCCEEEECCCC-
T ss_pred CcceEEEEEecCC-CCeECCCCCeEEEEEEcCC
Confidence 355554 478 7889999999999887663
No 24
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=66.20 E-value=4.5 Score=27.88 Aligned_cols=29 Identities=17% Similarity=0.455 Sum_probs=24.0
Q ss_pred CcceecCCCCceecCCCCCc-ccCccccee
Q psy2693 55 RESEACVYCGASYLPKYKGE-LCAVCTVSV 83 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~~kG~-lC~VC~ls~ 83 (122)
....+|.-||..|..+-... .||.|+-..
T Consensus 71 p~~~~C~~CG~~~e~~~~~~~~CP~Cgs~~ 100 (119)
T 2kdx_A 71 KVELECKDCSHVFKPNALDYGVCEKCHSKN 100 (119)
T ss_dssp CCEEECSSSSCEECSCCSTTCCCSSSSSCC
T ss_pred cceEEcCCCCCEEeCCCCCCCcCccccCCC
Confidence 44789999999999877777 899998664
No 25
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=65.90 E-value=2.7 Score=25.78 Aligned_cols=29 Identities=17% Similarity=0.351 Sum_probs=22.4
Q ss_pred cceecCCCCc--eecCCCCCcccCcccceee
Q psy2693 56 ESEACVYCGA--SYLPKYKGELCAVCTVSVI 84 (122)
Q Consensus 56 ~~v~CP~CgA--~Y~p~~kG~lC~VC~ls~I 84 (122)
....||-||+ -..+...-..|.-|+...-
T Consensus 18 ~~k~CP~CG~~~fm~~~~~R~~C~kCG~t~~ 48 (50)
T 3j20_Y 18 KNKFCPRCGPGVFMADHGDRWACGKCGYTEW 48 (50)
T ss_dssp SSEECSSSCSSCEEEECSSEEECSSSCCEEE
T ss_pred ecccCCCCCCceEEecCCCeEECCCCCCEEE
Confidence 3567999999 6667777888999987654
No 26
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.89 E-value=4.6 Score=20.41 Aligned_cols=18 Identities=17% Similarity=0.580 Sum_probs=13.7
Q ss_pred CCCcceecCCCCceecCC
Q psy2693 53 HGRESEACVYCGASYLPK 70 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p~ 70 (122)
.|+....|++||..|...
T Consensus 5 ~~~k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 5 SSGRAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCCCCEECSSSSCEECSS
T ss_pred CCCCCeECCCCChhhccC
Confidence 456678999999888653
No 27
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=65.42 E-value=3.2 Score=20.97 Aligned_cols=18 Identities=22% Similarity=0.403 Sum_probs=13.7
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+...+|+.||..|..
T Consensus 6 h~~~k~~~C~~C~k~f~~ 23 (37)
T 1p7a_A 6 STGIKPFQCPDCDRSFSR 23 (37)
T ss_dssp TCCSSSBCCTTTCCCBSS
T ss_pred CCCCCCccCCCCCcccCc
Confidence 356777899999987753
No 28
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=64.97 E-value=1.9 Score=29.07 Aligned_cols=14 Identities=21% Similarity=0.582 Sum_probs=11.2
Q ss_pred ceecCCCCceecCC
Q psy2693 57 SEACVYCGASYLPK 70 (122)
Q Consensus 57 ~v~CP~CgA~Y~p~ 70 (122)
.-.||+||+..+|+
T Consensus 47 g~~CPvCgs~l~~~ 60 (112)
T 1l8d_A 47 KGKCPVCGRELTDE 60 (112)
T ss_dssp SEECTTTCCEECHH
T ss_pred CCCCCCCCCcCCHH
Confidence 33599999999874
No 29
>2a6h_D DNA-directed RNA polymerase beta' chain; RNA polymerase holoenzyme, streptolydigin, antibiotic, transcription regulation; HET: STD; 2.40A {Thermus thermophilus} SCOP: e.29.1.2 PDB: 1smy_D* 1zyr_D* 1iw7_D* 2a69_D* 2a6e_D 2a68_D* 2be5_D* 2cw0_D 2o5i_D 2o5j_D* 2ppb_D* 3aoh_D* 3aoi_D* 3dxj_D* 3eql_D* 1ynj_D* 1l9z_D 1l9u_D* 1ynn_D* 2auj_D
Probab=64.04 E-value=4.8 Score=39.58 Aligned_cols=62 Identities=24% Similarity=0.513 Sum_probs=47.5
Q ss_pred HHHHHHHHhcCCCCceeecCCCCCC---eeeecccceeccCCCcceecCCCCceecCCCCCcccCcccce
Q psy2693 16 ARKLLAICNANPTDEHTIDYDEHNP---FQICARSYTPIYHGRESEACVYCGASYLPKYKGELCAVCTVS 82 (122)
Q Consensus 16 ArKIl~~ce~~~tDa~eIdYD~~np---F~ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~kG~lC~VC~ls 82 (122)
..+|.+.+.-.=+....|||.-..| =-.|-.=|-||. .-.|. ||..-...|+|.+|..|++-
T Consensus 15 P~~I~~ws~GeV~~peTiny~t~kPe~~GLFcerIFGp~~----~~~C~-Cgkyk~~~~~~~~C~~Cgve 79 (1524)
T 2a6h_D 15 PEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIK----DYECA-CGKYKRQRFEGKVCERCGVE 79 (1524)
T ss_dssp HHHHHHHEEEECCSCCCBCTTSCSBCSSSTTCTTTTCCSS----SSCCS-SCSSCSSTTTTCCCSSSCCC
T ss_pred HHHHHHhhcceecCcccccccCCCCCCCCcccchhcCccc----cceEc-CccccccCcCCCCCCCCCCc
Confidence 3567777777778888999976544 336888888874 45677 99777789999999999853
No 30
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=63.75 E-value=4.6 Score=20.08 Aligned_cols=17 Identities=18% Similarity=0.552 Sum_probs=13.2
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|++||..|..
T Consensus 3 ~~~k~~~C~~C~k~f~~ 19 (35)
T 1srk_A 3 SGKRPFVCRICLSAFTT 19 (35)
T ss_dssp SCCSCEECSSSCCEESS
T ss_pred CCCcCeeCCCCCcccCC
Confidence 35667889999998864
No 31
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=62.64 E-value=13 Score=27.29 Aligned_cols=38 Identities=21% Similarity=0.222 Sum_probs=25.6
Q ss_pred CeeeecccceeccCCCcceecCCCCceecCCC-------CCcccCcccc
Q psy2693 40 PFQICARSYTPIYHGRESEACVYCGASYLPKY-------KGELCAVCTV 81 (122)
Q Consensus 40 pF~ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~-------kG~lC~VC~l 81 (122)
++..|+.++.+. +..|.-| ||-+|.... .+..||+|+-
T Consensus 207 ~~~~c~i~~~~~---~dPv~~~-~gh~f~~~~i~~~~~~~~~~cP~~~~ 251 (281)
T 2c2l_A 207 DYLCGKISFELM---REPCITP-SGITYDRKDIEEHLQRVGHFNPVTRS 251 (281)
T ss_dssp STTBCTTTCSBC---SSEEECS-SCCEEETTHHHHHHHHTCSSCTTTCC
T ss_pred cccCCcCcCCHh---cCCeECC-CCCEECHHHHHHHHHHCCCCCcCCCC
Confidence 466898888885 4455556 887776543 3555888863
No 32
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=62.33 E-value=4.4 Score=25.28 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=18.6
Q ss_pred eecCCCCc---eecCCCCCcccCccccee
Q psy2693 58 EACVYCGA---SYLPKYKGELCAVCTVSV 83 (122)
Q Consensus 58 v~CP~CgA---~Y~p~~kG~lC~VC~ls~ 83 (122)
.+||.||. .|..+--..+|..|++.-
T Consensus 12 ~~Cp~C~~~~lv~D~~~ge~vC~~CGlVl 40 (58)
T 1dl6_A 12 VTCPNHPDAILVEDYRAGDMICPECGLVV 40 (58)
T ss_dssp CSBTTBSSSCCEECSSSCCEECTTTCCEE
T ss_pred ccCcCCCCCceeEeCCCCeEEeCCCCCEE
Confidence 37999987 244555578899998753
No 33
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.60 E-value=4.8 Score=20.03 Aligned_cols=17 Identities=12% Similarity=0.214 Sum_probs=13.2
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|++||..|..
T Consensus 5 ~~~k~~~C~~C~k~f~~ 21 (36)
T 2elt_A 5 SSGKPYKCPQCSYASAI 21 (36)
T ss_dssp CCCCSEECSSSSCEESS
T ss_pred CCCCCCCCCCCCcccCC
Confidence 45667899999988754
No 34
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.01 E-value=4.8 Score=20.21 Aligned_cols=16 Identities=19% Similarity=0.472 Sum_probs=12.3
Q ss_pred CCcceecCCCCceecC
Q psy2693 54 GRESEACVYCGASYLP 69 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~p 69 (122)
+.....|++||..|.-
T Consensus 6 ~~k~~~C~~C~k~f~~ 21 (36)
T 2els_A 6 SGKIFTCEYCNKVFKF 21 (36)
T ss_dssp CCCCEECTTTCCEESS
T ss_pred CCCCEECCCCCceeCC
Confidence 4566789999998753
No 35
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.52 E-value=3.9 Score=20.64 Aligned_cols=17 Identities=24% Similarity=0.468 Sum_probs=13.0
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|++||..|..
T Consensus 5 ~~~k~~~C~~C~k~f~~ 21 (37)
T 2elo_A 5 SSGRSYSCPVCEKSFSE 21 (37)
T ss_dssp CCCCCCEETTTTEECSS
T ss_pred CCCCCcCCCCCCCccCC
Confidence 45667889999988754
No 36
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.17 E-value=5.1 Score=20.57 Aligned_cols=17 Identities=18% Similarity=0.247 Sum_probs=13.4
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+...+|+.||..|..
T Consensus 5 ~~~k~~~C~~C~k~f~~ 21 (37)
T 2elm_A 5 SSGHLYYCSQCHYSSIT 21 (37)
T ss_dssp SSSCEEECSSSSCEEEC
T ss_pred CCCcCeECCCCCcccCC
Confidence 46677899999998864
No 37
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.16 E-value=6.1 Score=21.03 Aligned_cols=19 Identities=21% Similarity=0.574 Sum_probs=14.5
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+....|++||..|..
T Consensus 6 ~H~~~~~~~C~~C~k~F~~ 24 (46)
T 2emi_A 6 SGTGERHYECSECGKAFIQ 24 (46)
T ss_dssp SCSSCCCEECSSSCCEESS
T ss_pred ccCCCCCCCCCCCCcccCC
Confidence 4456777899999988754
No 38
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=58.59 E-value=4.6 Score=26.23 Aligned_cols=15 Identities=27% Similarity=0.545 Sum_probs=11.3
Q ss_pred CcceecCCCCceecC
Q psy2693 55 RESEACVYCGASYLP 69 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p 69 (122)
.+.++||+||.+.+=
T Consensus 36 ~~~iRC~~CG~RILy 50 (63)
T 3h0g_L 36 KEVIRCRECGHRVMY 50 (63)
T ss_dssp SSCCCCSSSCCCCCB
T ss_pred CCceECCCCCcEEEE
Confidence 466889999887663
No 39
>1ryq_A DNA-directed RNA polymerase, subunit E''; structural genomics, zinc, PSI, protein structure initiative; 1.38A {Pyrococcus furiosus} SCOP: g.41.9.3 PDB: 3qqc_E
Probab=58.40 E-value=7.9 Score=25.59 Aligned_cols=48 Identities=23% Similarity=0.484 Sum_probs=34.9
Q ss_pred CCCcceecCCCCceecCCCCCcccCcccceeecCCCcccCcceecccchhhhhh
Q psy2693 53 HGRESEACVYCGASYLPKYKGELCAVCTVSVIDTHRNAYGLQICAGLMKSDVIN 106 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p~~kG~lC~VC~ls~IG~~~~a~GLr~~~~~~~~~~~~ 106 (122)
.|+....|--|.... .++.|++|+-...= .+-.||-+...--+|.|-.
T Consensus 7 ~~~~~~AC~~C~~~~----~~~~CPnC~s~~tS--~~w~G~ViI~dPe~S~IAK 54 (69)
T 1ryq_A 7 HGSSEKACRHCHYIT----SEDRCPVCGSRDLS--EEWFDLVIIVDVENSEIAK 54 (69)
T ss_dssp C---CEEETTTCBEE----SSSSCTTTCCCCEE--SCEEEEEEESCGGGCHHHH
T ss_pred cCchhhhHHhCCccc----cCCcCCCccCCccC--CccceEEEEeCCchhHHHH
Confidence 578889999999965 68999999976655 6778887777667777644
No 40
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=58.32 E-value=5.9 Score=25.50 Aligned_cols=26 Identities=27% Similarity=0.613 Sum_probs=19.7
Q ss_pred cceecCCCCceecCCCCCcccCcccceeec
Q psy2693 56 ESEACVYCGASYLPKYKGELCAVCTVSVID 85 (122)
Q Consensus 56 ~~v~CP~CgA~Y~p~~kG~lC~VC~ls~IG 85 (122)
...+||-||...+ ..+|+.|+--..-
T Consensus 5 ~mr~C~~CgvYTL----k~~CP~CG~~T~~ 30 (60)
T 2apo_B 5 RMKKCPKCGLYTL----KEICPKCGEKTVI 30 (60)
T ss_dssp CCEECTTTCCEES----SSBCSSSCSBCBC
T ss_pred hceeCCCCCCEec----cccCcCCCCcCCC
Confidence 4568999999888 5679998865544
No 41
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.14 E-value=7.1 Score=20.82 Aligned_cols=19 Identities=21% Similarity=0.595 Sum_probs=14.6
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+...+|++||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2em4_A 6 SGTGQRPYECIECGKAFKT 24 (46)
T ss_dssp CCCCSSSEECSSSCCEESS
T ss_pred ccCCCcCcCCCCCCCccCC
Confidence 4457777899999988764
No 42
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=57.85 E-value=4 Score=29.31 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=24.4
Q ss_pred CcceecCCCCceecCCC-----------C----------CcccCcccceee
Q psy2693 55 RESEACVYCGASYLPKY-----------K----------GELCAVCTVSVI 84 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~~-----------k----------G~lC~VC~ls~I 84 (122)
....+|.-||..|..+. . ...||.|+=..+
T Consensus 68 p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~~~ 118 (139)
T 3a43_A 68 EAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDF 118 (139)
T ss_dssp CCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCCCE
T ss_pred CCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCCcc
Confidence 56889999999998776 5 678999987654
No 43
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=57.69 E-value=6.3 Score=20.37 Aligned_cols=18 Identities=28% Similarity=0.558 Sum_probs=13.9
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 6 H~~~~~~~C~~C~k~f~~ 23 (42)
T 2epc_A 6 SGGETPYLCGQCGKSFTQ 23 (42)
T ss_dssp CCSSCCEECSSSCCEESS
T ss_pred CCCCCCeECCCCCcccCC
Confidence 356777899999998864
No 44
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.30 E-value=6.3 Score=19.72 Aligned_cols=17 Identities=12% Similarity=0.245 Sum_probs=12.9
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|....+|+.||..|..
T Consensus 5 ~~~k~~~C~~C~k~f~~ 21 (36)
T 2elv_A 5 SSGLLYDCHICERKFKN 21 (36)
T ss_dssp CCCCCEECSSSCCEESS
T ss_pred CCCCCeECCCCCCccCC
Confidence 35667889999988764
No 45
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.07 E-value=5.9 Score=19.85 Aligned_cols=16 Identities=13% Similarity=0.275 Sum_probs=12.7
Q ss_pred CCcceecCCCCceecC
Q psy2693 54 GRESEACVYCGASYLP 69 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~p 69 (122)
|+...+|++||..|..
T Consensus 6 ~~k~~~C~~C~k~f~~ 21 (36)
T 2elq_A 6 SGKPFKCSLCEYATRS 21 (36)
T ss_dssp CCCSEECSSSSCEESC
T ss_pred CCCCccCCCCCchhCC
Confidence 5667899999998864
No 46
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.05 E-value=6.3 Score=20.95 Aligned_cols=20 Identities=20% Similarity=0.527 Sum_probs=14.5
Q ss_pred eccCCCcceecCCCCceecC
Q psy2693 50 PIYHGRESEACVYCGASYLP 69 (122)
Q Consensus 50 PIY~G~~~v~CP~CgA~Y~p 69 (122)
.+-.|+....|+.||..|..
T Consensus 5 ~~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2epz_A 5 SSGTGEKPFDCIDCGKAFSD 24 (46)
T ss_dssp SSCCCCCSBCCTTTCCCBSS
T ss_pred CCcCCCCCeECCCCCceeCC
Confidence 34456777889999987753
No 47
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.79 E-value=6.8 Score=20.90 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=14.7
Q ss_pred eccCCCcceecCCCCceecC
Q psy2693 50 PIYHGRESEACVYCGASYLP 69 (122)
Q Consensus 50 PIY~G~~~v~CP~CgA~Y~p 69 (122)
.+..|+....|+.||..|..
T Consensus 5 ~~h~~~k~~~C~~C~k~F~~ 24 (46)
T 2elz_A 5 SSGSVEKPYKCEDCGKGYNR 24 (46)
T ss_dssp SCCCCCSSCBCSSSCCBCSS
T ss_pred CCCCCCCCeeCcccCchhCC
Confidence 34557777889999988754
No 48
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.77 E-value=7.5 Score=20.11 Aligned_cols=17 Identities=29% Similarity=0.677 Sum_probs=13.4
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+...+|++||..|..
T Consensus 6 ~~~k~~~C~~C~k~f~~ 22 (41)
T 2ept_A 6 SGQRVYECQECGKSFRQ 22 (41)
T ss_dssp CCCCCEECSSSCCEESS
T ss_pred CCCCCeECCCCCCCcCC
Confidence 46677899999988754
No 49
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.73 E-value=8 Score=20.51 Aligned_cols=19 Identities=21% Similarity=0.431 Sum_probs=14.1
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+...+|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ene_A 6 SGTGEKPYKCNECGKVFRH 24 (46)
T ss_dssp SCCCSSSEECSSSCCEESS
T ss_pred CCCCCCCeECCCCCchhCC
Confidence 3456777899999988753
No 50
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=54.39 E-value=6.7 Score=18.28 Aligned_cols=13 Identities=15% Similarity=0.329 Sum_probs=9.7
Q ss_pred ceecCCCCceecC
Q psy2693 57 SEACVYCGASYLP 69 (122)
Q Consensus 57 ~v~CP~CgA~Y~p 69 (122)
...|+.||..|..
T Consensus 3 ~~~C~~C~k~f~~ 15 (27)
T 2kvh_A 3 PFSCSLCPQRSRD 15 (27)
T ss_dssp CEECSSSSCEESS
T ss_pred CccCCCcChhhCC
Confidence 3579999988753
No 51
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.26 E-value=10 Score=19.84 Aligned_cols=19 Identities=16% Similarity=0.420 Sum_probs=14.5
Q ss_pred cCCCcceecCCCCceecCC
Q psy2693 52 YHGRESEACVYCGASYLPK 70 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p~ 70 (122)
-.|+...+|+.||..|...
T Consensus 7 H~~~k~~~C~~C~k~f~~~ 25 (44)
T 2yu5_A 7 GAGENPFKCSKCDRVFTQR 25 (44)
T ss_dssp CSCCCSEECSSSSCEESSS
T ss_pred cCCCCCeECCCCCchhCCH
Confidence 3467778999999988643
No 52
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.92 E-value=8.5 Score=20.49 Aligned_cols=19 Identities=21% Similarity=0.476 Sum_probs=14.3
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+...+|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~F~~ 24 (46)
T 2emf_A 6 SGTGGKHFECTECGKAFTR 24 (46)
T ss_dssp SSSSSCCEECSSSCCEESC
T ss_pred ccCCCCCeECCCCCchhCC
Confidence 3456777899999988754
No 53
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.59 E-value=7.1 Score=20.83 Aligned_cols=19 Identities=16% Similarity=0.503 Sum_probs=14.0
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+...+|++||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eoh_A 6 SGSGKKPYECKECRKTFIQ 24 (46)
T ss_dssp SCCCSCSCCCSSSCCCCSS
T ss_pred CcCCCCCcCCCCcCchhCC
Confidence 4456777889999987754
No 54
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.48 E-value=9.6 Score=20.26 Aligned_cols=19 Identities=21% Similarity=0.473 Sum_probs=14.6
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+...+|++||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2em2_A 6 SGSGEKPFKCKECGKAFRQ 24 (46)
T ss_dssp SCCCCCSEECSSSCCEESS
T ss_pred CCCCCCCEECCcCCchhCC
Confidence 4457777899999988754
No 55
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.43 E-value=9.2 Score=20.05 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=14.2
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (44)
T 2emb_A 6 SGHTRKRYECSKCQATFNL 24 (44)
T ss_dssp CCCCCSSEECTTTCCEESC
T ss_pred ccCCCCCeECCCCCCccCC
Confidence 3456777899999988764
No 56
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=53.22 E-value=8.2 Score=19.98 Aligned_cols=17 Identities=24% Similarity=0.651 Sum_probs=13.4
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+...+|+.||..|..
T Consensus 6 ~~~k~~~C~~C~k~f~~ 22 (42)
T 2el5_A 6 SGENPYECSECGKAFNR 22 (42)
T ss_dssp SSCCSEECSSSCCEESS
T ss_pred CCCCCccCCCcChhhCC
Confidence 46777899999998764
No 57
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.84 E-value=7.4 Score=20.66 Aligned_cols=19 Identities=26% Similarity=0.531 Sum_probs=14.3
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+...+|+.||..|..
T Consensus 6 ~h~~~k~~~C~~C~k~f~~ 24 (46)
T 2ysp_A 6 SGTGEKPYKCEKCGKGYNS 24 (46)
T ss_dssp CCSSCCSEEETTTTEEESC
T ss_pred CCCCCCCeECCCCCCccCC
Confidence 4457777899999988754
No 58
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=52.83 E-value=7.1 Score=25.66 Aligned_cols=17 Identities=35% Similarity=0.790 Sum_probs=11.3
Q ss_pred CCCcceecCCCCceecCC
Q psy2693 53 HGRESEACVYCGASYLPK 70 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p~ 70 (122)
.|....+|| ||+.+..+
T Consensus 17 ~~~kT~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 17 EGAKTRKCV-CGRTVNVK 33 (71)
T ss_dssp TTCSEEEET-TTEEEECC
T ss_pred CCCcEEECC-CCCeeeec
Confidence 466777777 77766554
No 59
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=52.74 E-value=8.2 Score=21.29 Aligned_cols=17 Identities=29% Similarity=0.600 Sum_probs=13.3
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|++||..|..
T Consensus 3 t~~kp~~C~~C~k~F~~ 19 (48)
T 3iuf_A 3 DRDKPYACDICGKRYKN 19 (48)
T ss_dssp TTTSCEECTTTCCEESS
T ss_pred CCCcCEECCCcCcccCC
Confidence 46667889999988864
No 60
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.63 E-value=6.7 Score=20.25 Aligned_cols=18 Identities=22% Similarity=0.565 Sum_probs=13.6
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 6 H~~~k~~~C~~C~k~f~~ 23 (42)
T 2ytb_A 6 SGGEKPYRCDQCGKAFSQ 23 (42)
T ss_dssp CCSCCSBCCTTTTCCBSS
T ss_pred cCCCCCeeCCCccchhCC
Confidence 346777889999988754
No 61
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.59 E-value=6.2 Score=19.58 Aligned_cols=17 Identities=18% Similarity=0.602 Sum_probs=12.8
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|+.||..|..
T Consensus 5 ~~~~~~~C~~C~k~f~~ 21 (36)
T 2elr_A 5 SSGKTHLCDMCGKKFKS 21 (36)
T ss_dssp CCCSSCBCTTTCCBCSS
T ss_pred CCCCCeecCcCCCCcCc
Confidence 35667889999988754
No 62
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.42 E-value=6.7 Score=20.55 Aligned_cols=19 Identities=21% Similarity=0.476 Sum_probs=14.2
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (44)
T 2eoj_A 6 SGTGENPYECCECGKVFSR 24 (44)
T ss_dssp SSSSCCSCEETTTTEECSS
T ss_pred ccCCCcCeeCCCCCCccCC
Confidence 3456777899999988754
No 63
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=51.97 E-value=9.3 Score=24.24 Aligned_cols=24 Identities=21% Similarity=0.577 Sum_probs=17.7
Q ss_pred CcceecCCCCceecCCCCCcccCcccc
Q psy2693 55 RESEACVYCGASYLPKYKGELCAVCTV 81 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~~kG~lC~VC~l 81 (122)
...+.||-||...+|- .+|+.|+.
T Consensus 28 p~l~~c~~cG~~~~pH---~vc~~CG~ 51 (60)
T 2zjr_Z 28 PNLTECPQCHGKKLSH---HICPNCGY 51 (60)
T ss_dssp CCCEECTTTCCEECTT---BCCTTTCB
T ss_pred CCceECCCCCCEeCCc---eEcCCCCc
Confidence 4567888888886664 68888874
No 64
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.71 E-value=3 Score=25.94 Aligned_cols=14 Identities=36% Similarity=0.757 Sum_probs=7.2
Q ss_pred CcceecCCCCceec
Q psy2693 55 RESEACVYCGASYL 68 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~ 68 (122)
+..+.|++||..+.
T Consensus 41 ~~~~~C~~C~~~~~ 54 (75)
T 2d9k_A 41 ARTELCGNCGRNVL 54 (75)
T ss_dssp HCEEECSSSCCEEE
T ss_pred CCceEcccCCCcCc
Confidence 44455555555443
No 65
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.15 E-value=8.9 Score=19.83 Aligned_cols=18 Identities=28% Similarity=0.684 Sum_probs=14.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|+.||..|..
T Consensus 6 H~~~k~~~C~~C~k~f~~ 23 (42)
T 2en2_A 6 SGGEKPYKCETCGARFVQ 23 (42)
T ss_dssp CCSSCSEECTTTCCEESS
T ss_pred cCCCCCEeCCCcChhhCC
Confidence 346777899999998764
No 66
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.12 E-value=7.9 Score=19.95 Aligned_cols=17 Identities=18% Similarity=0.587 Sum_probs=13.0
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+...+|+.||..|..
T Consensus 6 ~~~k~~~C~~C~k~f~~ 22 (42)
T 2yte_A 6 SGEKPYSCAECKETFSD 22 (42)
T ss_dssp CSCCSCBCTTTCCBCSS
T ss_pred CCCCCeECCCCCCccCC
Confidence 46667889999987754
No 67
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.10 E-value=8.6 Score=20.39 Aligned_cols=19 Identities=21% Similarity=0.434 Sum_probs=13.8
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2emg_A 6 SGTGENPFICSECGKVFTH 24 (46)
T ss_dssp CCCSCCSCBCTTTCCBCSS
T ss_pred CCCCCCCEECCccCcccCC
Confidence 3456677889999987753
No 68
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.62 E-value=7.4 Score=20.81 Aligned_cols=19 Identities=21% Similarity=0.503 Sum_probs=14.0
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+...+|+.||..|..
T Consensus 6 ~h~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytm_A 6 SGTGEKPYKCMECGKAFGD 24 (46)
T ss_dssp CCSSCCSSSBTTTTBCCSS
T ss_pred CCCCCCCcCCCCCCchhCC
Confidence 4456777889999987754
No 69
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.54 E-value=12 Score=19.77 Aligned_cols=19 Identities=21% Similarity=0.417 Sum_probs=14.5
Q ss_pred cCCCcceecCCCCceecCC
Q psy2693 52 YHGRESEACVYCGASYLPK 70 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p~ 70 (122)
..|+....|++||..|...
T Consensus 7 H~~~k~~~C~~C~k~F~~~ 25 (46)
T 2en3_A 7 GTGEKPFQCKECGMNFSWS 25 (46)
T ss_dssp SCCCCSEECSSSCCEESSS
T ss_pred cCCCCCeeCcccChhhCCH
Confidence 3467778999999988643
No 70
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.54 E-value=9.4 Score=19.85 Aligned_cols=18 Identities=17% Similarity=0.401 Sum_probs=14.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|.....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (44)
T 2eof_A 7 GTGEKPYECNECQKAFNT 24 (44)
T ss_dssp CSCCCSEECTTTCCEESC
T ss_pred CCCCCCeECCCCCcccCC
Confidence 356777899999998764
No 71
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=50.09 E-value=11 Score=19.93 Aligned_cols=19 Identities=26% Similarity=0.489 Sum_probs=14.4
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~F~~ 24 (46)
T 2emj_A 6 SGTGEKPFECAECGKSFSI 24 (46)
T ss_dssp CCCCCCSEECSSSSCEESS
T ss_pred CCCCCCCEECCCCCcccCC
Confidence 3456777899999988754
No 72
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.97 E-value=12 Score=19.84 Aligned_cols=19 Identities=21% Similarity=0.513 Sum_probs=14.0
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+...+|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2em7_A 6 SGTGEKPYKCEECGKGFIC 24 (46)
T ss_dssp SSSCCCSEECSSSCCEESC
T ss_pred CCCCCcCccCCCccchhCC
Confidence 3456777899999987754
No 73
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.84 E-value=10 Score=20.01 Aligned_cols=18 Identities=28% Similarity=0.648 Sum_probs=14.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|.....|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2yts_A 7 GTGEKPYICNECGKSFIQ 24 (46)
T ss_dssp CCSCCSEECSSSCCEESS
T ss_pred CCCCcCEECCCCChhhCC
Confidence 356777899999988754
No 74
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.58 E-value=13 Score=19.59 Aligned_cols=18 Identities=22% Similarity=0.556 Sum_probs=13.9
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (44)
T 2epv_A 7 GSGEKPYECNECGKAFIW 24 (44)
T ss_dssp CCCCCSEECSSSCCEESS
T ss_pred cCCCcCeECCCCCcccCc
Confidence 456777899999988754
No 75
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.42 E-value=12 Score=19.63 Aligned_cols=18 Identities=22% Similarity=0.538 Sum_probs=13.9
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|.....|++||..|..
T Consensus 7 H~~~~~~~C~~C~k~f~~ 24 (46)
T 2yrj_A 7 GTGEKPYRCGECGKAFAQ 24 (46)
T ss_dssp CCCCCCEECSSSCCEESS
T ss_pred CCCCCCeECCCCCCccCC
Confidence 346777899999988754
No 76
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.27 E-value=12 Score=19.80 Aligned_cols=19 Identities=21% Similarity=0.501 Sum_probs=14.2
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2enc_A 6 SGSGEKPFKCEECGKGFYT 24 (46)
T ss_dssp CCCCCCSEECSSSCCEESS
T ss_pred CCCCCCCcCCCCCCCcCCC
Confidence 3456777899999988754
No 77
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=49.26 E-value=9.4 Score=17.62 Aligned_cols=13 Identities=38% Similarity=0.920 Sum_probs=9.4
Q ss_pred ceecCCCCceecC
Q psy2693 57 SEACVYCGASYLP 69 (122)
Q Consensus 57 ~v~CP~CgA~Y~p 69 (122)
...|+.||..|..
T Consensus 3 ~~~C~~C~~~f~~ 15 (30)
T 2m0d_A 3 PYQCDYCGRSFSD 15 (30)
T ss_dssp CEECTTTCCEESC
T ss_pred CccCCCCCcccCC
Confidence 4578888887753
No 78
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.22 E-value=12 Score=19.84 Aligned_cols=19 Identities=32% Similarity=0.608 Sum_probs=14.4
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+...+|+.||..|..
T Consensus 6 ~h~~~k~~~C~~C~k~f~~ 24 (46)
T 2em8_A 6 SGSGEKPYKCVECGKGYKR 24 (46)
T ss_dssp CCCSCCSEECSSSCCEESS
T ss_pred CCCCCCCeECcccCchhCC
Confidence 3456777899999988754
No 79
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.12 E-value=11 Score=19.92 Aligned_cols=18 Identities=22% Similarity=0.552 Sum_probs=14.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|.....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eow_A 7 GTGEKPYKCNECGKAFRA 24 (46)
T ss_dssp SCCCCCEECTTSCCEESS
T ss_pred CCCCCCeeccccCChhcC
Confidence 346777899999998764
No 80
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=49.04 E-value=7.6 Score=25.38 Aligned_cols=11 Identities=27% Similarity=0.770 Sum_probs=5.9
Q ss_pred cceecCCCCce
Q psy2693 56 ESEACVYCGAS 66 (122)
Q Consensus 56 ~~v~CP~CgA~ 66 (122)
..++||.||.+
T Consensus 44 d~irCp~CG~R 54 (70)
T 1twf_L 44 DAVRCKDCGHR 54 (70)
T ss_dssp STTCCSSSCCC
T ss_pred CCccCCCCCce
Confidence 44556666653
No 81
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.98 E-value=15 Score=19.47 Aligned_cols=18 Identities=11% Similarity=0.231 Sum_probs=13.7
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eoy_A 7 GQKEKCFKCNKCEKTFSC 24 (46)
T ss_dssp CCCSCCEECSSSCCEESS
T ss_pred cCCCCCEECcCCCCcCCC
Confidence 346677889999988764
No 82
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=48.89 E-value=11 Score=23.91 Aligned_cols=22 Identities=27% Similarity=0.613 Sum_probs=15.4
Q ss_pred cceecCCCCceecCCCCCcccCccc
Q psy2693 56 ESEACVYCGASYLPKYKGELCAVCT 80 (122)
Q Consensus 56 ~~v~CP~CgA~Y~p~~kG~lC~VC~ 80 (122)
..+.||-||...+|- .+|+.|+
T Consensus 29 ~l~~c~~cGe~~~~H---~vc~~CG 50 (60)
T 3v2d_5 29 TLVPCPECKAMKPPH---TVCPECG 50 (60)
T ss_dssp CCEECTTTCCEECTT---SCCTTTC
T ss_pred ceeECCCCCCeecce---EEcCCCC
Confidence 467788888766665 4677776
No 83
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=48.79 E-value=9.5 Score=17.69 Aligned_cols=13 Identities=23% Similarity=0.677 Sum_probs=9.6
Q ss_pred ceecCCCCceecC
Q psy2693 57 SEACVYCGASYLP 69 (122)
Q Consensus 57 ~v~CP~CgA~Y~p 69 (122)
...|+.||..|..
T Consensus 3 ~~~C~~C~k~f~~ 15 (28)
T 2kvf_A 3 PYSCSVCGKRFSL 15 (28)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCCCcccCC
Confidence 3578889887754
No 84
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.61 E-value=9.2 Score=20.26 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+...+|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2enf_A 7 GTGEKPYKCNECGKVFTQ 24 (46)
T ss_dssp CCCCCSCBCSSSCCBCSS
T ss_pred CCCCcCeECCCCCcccCC
Confidence 456777899999988754
No 85
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.47 E-value=9.9 Score=20.20 Aligned_cols=19 Identities=21% Similarity=0.524 Sum_probs=13.7
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytq_A 6 SGAGEKPYGCSECGKAFSS 24 (46)
T ss_dssp CSSCCCSCBCSSSCCBCSC
T ss_pred CcCCCCCcCCCccChhhCC
Confidence 3456777889999987653
No 86
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.45 E-value=12 Score=19.76 Aligned_cols=18 Identities=22% Similarity=0.626 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|+.||..|..
T Consensus 7 H~~~~~~~C~~C~k~f~~ 24 (46)
T 2eor_A 7 GTGEKPYNCEECGKAFIH 24 (46)
T ss_dssp SSCCCSEECTTTCCEESS
T ss_pred cCCCcCccCCCCCCCcCC
Confidence 356777899999988764
No 87
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.40 E-value=13 Score=19.69 Aligned_cols=19 Identities=21% Similarity=0.492 Sum_probs=14.2
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+...+|++||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~F~~ 24 (46)
T 2ytp_A 6 SGTGERHYECSECGKAFAR 24 (46)
T ss_dssp SSCCCCCEECSSSCCEESS
T ss_pred CcCCCCCeECCcCCcccCC
Confidence 3456777899999988754
No 88
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=48.38 E-value=13 Score=19.54 Aligned_cols=19 Identities=26% Similarity=0.429 Sum_probs=14.0
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~f~~ 24 (46)
T 2em9_A 6 SGTGEKPYNCKECGKSFRW 24 (46)
T ss_dssp SCCCCCSEECSSSCCEESS
T ss_pred CCCCCcCeECCccccccCC
Confidence 3456777889999988754
No 89
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.16 E-value=16 Score=19.17 Aligned_cols=18 Identities=22% Similarity=0.503 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2epw_A 7 GTGEKPCKCTECGKAFCW 24 (46)
T ss_dssp CCCCCSEECSSSCCEESS
T ss_pred CCCCCCeeCCCCCCccCC
Confidence 346677889999988764
No 90
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.81 E-value=12 Score=19.78 Aligned_cols=20 Identities=15% Similarity=0.351 Sum_probs=14.4
Q ss_pred ccCCCcceecCCCCceecCC
Q psy2693 51 IYHGRESEACVYCGASYLPK 70 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p~ 70 (122)
+..|+....|+.||..|...
T Consensus 6 ~h~~~k~~~C~~C~k~F~~~ 25 (46)
T 2enh_A 6 SGTGEKPYECDVCRKAFSHH 25 (46)
T ss_dssp CCCCSSSCBCTTTCCBCSSS
T ss_pred CcCCCCCcCCCCcCchhCCH
Confidence 34566778899999887643
No 91
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=47.77 E-value=13 Score=19.64 Aligned_cols=20 Identities=25% Similarity=0.556 Sum_probs=14.4
Q ss_pred ccCCCcceecCCCCceecCC
Q psy2693 51 IYHGRESEACVYCGASYLPK 70 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p~ 70 (122)
+-.|+...+|+.||..|...
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~ 25 (46)
T 2ely_A 6 SGTGEKPFKCVECGKGFSRR 25 (46)
T ss_dssp CCCCCCSBCCSSSCCCBSST
T ss_pred CCCCCCCcccCccCcccCCH
Confidence 34566778899999887643
No 92
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=47.74 E-value=9.6 Score=19.50 Aligned_cols=16 Identities=19% Similarity=0.561 Sum_probs=11.9
Q ss_pred CCcceecCCCCceecC
Q psy2693 54 GRESEACVYCGASYLP 69 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~p 69 (122)
|+....|+.||..|..
T Consensus 3 ~~k~~~C~~C~k~f~~ 18 (39)
T 1njq_A 3 PPRSYTCSFCKREFRS 18 (39)
T ss_dssp CSSSEECTTTCCEESS
T ss_pred CCCceECCCCCcccCC
Confidence 4556789999988754
No 93
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=47.62 E-value=6.9 Score=24.32 Aligned_cols=29 Identities=17% Similarity=0.443 Sum_probs=22.0
Q ss_pred ceecCCCCceec--CCCCCcccCcccceeec
Q psy2693 57 SEACVYCGASYL--PKYKGELCAVCTVSVID 85 (122)
Q Consensus 57 ~v~CP~CgA~Y~--p~~kG~lC~VC~ls~IG 85 (122)
...||-||+... +.+.--.|.-|+..+.-
T Consensus 18 ~~fCPkCG~~~~ma~~~dr~~C~kCgyt~~~ 48 (55)
T 2k4x_A 18 HRFCPRCGPGVFLAEHADRYSCGRCGYTEFK 48 (55)
T ss_dssp SCCCTTTTTTCCCEECSSEEECTTTCCCEEC
T ss_pred cccCcCCCCceeEeccCCEEECCCCCCEEEe
Confidence 567999999544 55666789999988763
No 94
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=47.59 E-value=8.2 Score=27.73 Aligned_cols=26 Identities=27% Similarity=0.796 Sum_probs=20.9
Q ss_pred eecCCCCceecCCCCCcccCcccceeec
Q psy2693 58 EACVYCGASYLPKYKGELCAVCTVSVID 85 (122)
Q Consensus 58 v~CP~CgA~Y~p~~kG~lC~VC~ls~IG 85 (122)
-+|+-||+.|+|- ...|+.|+-....
T Consensus 48 ~rC~~CG~~~~PP--r~~Cp~C~s~~~~ 73 (145)
T 3irb_A 48 SKCSKCGRIFVPA--RSYCEHCFVKIEN 73 (145)
T ss_dssp EECTTTCCEEESC--CSEETTTTEECCE
T ss_pred EEeCCCCcEEcCc--hhhCcCCCCCcee
Confidence 4799999999987 6789999866554
No 95
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=47.57 E-value=10 Score=24.41 Aligned_cols=26 Identities=31% Similarity=0.563 Sum_probs=19.8
Q ss_pred cceecCCCCceecCCCCCcccCcccceeec
Q psy2693 56 ESEACVYCGASYLPKYKGELCAVCTVSVID 85 (122)
Q Consensus 56 ~~v~CP~CgA~Y~p~~kG~lC~VC~ls~IG 85 (122)
...+||-||...+ ...|++|+--..-
T Consensus 4 ~mr~C~~Cg~YTL----k~~CP~CG~~t~~ 29 (60)
T 2aus_D 4 RIRKCPKCGRYTL----KETCPVCGEKTKV 29 (60)
T ss_dssp CCEECTTTCCEES----SSBCTTTCSBCEE
T ss_pred cceECCCCCCEEc----cccCcCCCCccCC
Confidence 4568999999888 4579999866554
No 96
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.54 E-value=13 Score=19.63 Aligned_cols=18 Identities=22% Similarity=0.588 Sum_probs=13.6
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+...+|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eml_A 7 GTGEKPYECSVCGKAFSH 24 (46)
T ss_dssp CSSCCSEECSSSCCEESS
T ss_pred cCCCCCeeCCCcCCccCC
Confidence 356777889999988754
No 97
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=47.42 E-value=6.2 Score=29.22 Aligned_cols=13 Identities=38% Similarity=0.815 Sum_probs=10.7
Q ss_pred CCcceecCCCCce
Q psy2693 54 GRESEACVYCGAS 66 (122)
Q Consensus 54 G~~~v~CP~CgA~ 66 (122)
|.....||.||+.
T Consensus 150 ~~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 150 DEAPEYCPVCGAP 162 (170)
T ss_dssp SCCCSBCTTTCCB
T ss_pred CCCCCCCCCCCCC
Confidence 6777799999974
No 98
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.32 E-value=9.1 Score=19.85 Aligned_cols=18 Identities=22% Similarity=0.595 Sum_probs=13.5
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 6 H~~~k~~~C~~C~k~f~~ 23 (42)
T 2eos_A 6 SGGEKPYPCEICGTRFRH 23 (42)
T ss_dssp CSSSCCBCCSSSCCCBSS
T ss_pred cCCCCCEECCCCCCccCC
Confidence 346677889999988764
No 99
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.05 E-value=12 Score=19.69 Aligned_cols=18 Identities=22% Similarity=0.783 Sum_probs=13.1
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (47)
T 2epx_A 7 GTGKKPYECIECGKAFIQ 24 (47)
T ss_dssp CCCCCSBCCSSSCCCBSS
T ss_pred cCCCCCEECCccCchhCC
Confidence 346677889999887653
No 100
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=47.01 E-value=8 Score=18.22 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=9.5
Q ss_pred ceecCCCCceecC
Q psy2693 57 SEACVYCGASYLP 69 (122)
Q Consensus 57 ~v~CP~CgA~Y~p 69 (122)
..+|+.||..|..
T Consensus 3 ~~~C~~C~k~f~~ 15 (27)
T 2kvg_A 3 PYRCPLCRAGCPS 15 (27)
T ss_dssp TEEETTTTEEESC
T ss_pred CcCCCCCCcccCC
Confidence 3578999887753
No 101
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.95 E-value=15 Score=19.31 Aligned_cols=18 Identities=33% Similarity=0.556 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|..
T Consensus 7 H~~~~~~~C~~C~k~f~~ 24 (46)
T 2ytg_A 7 GTGEKPFKCGECGKSYNQ 24 (46)
T ss_dssp CSSCCSEECTTTCCEESS
T ss_pred CCCCCCeECCCCCcccCC
Confidence 346777899999988764
No 102
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.87 E-value=13 Score=19.63 Aligned_cols=18 Identities=22% Similarity=0.551 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytj_A 7 GTGEKPYICAECGKAFTI 24 (46)
T ss_dssp TSSCCSEECSSSCCEESS
T ss_pred CCCCcCeECCCCChhhCC
Confidence 456777899999988754
No 103
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.65 E-value=12 Score=19.83 Aligned_cols=18 Identities=22% Similarity=0.567 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2yto_A 7 GTGEKPYKCSDCGKAFTR 24 (46)
T ss_dssp CCSCCCEECSSSCCEESS
T ss_pred cCCCCCEECcccCCccCC
Confidence 346677899999988754
No 104
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.52 E-value=15 Score=19.34 Aligned_cols=18 Identities=17% Similarity=0.401 Sum_probs=13.7
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|.....|++||..|.-
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytf_A 7 GTGEKPFECSECQKAFNT 24 (46)
T ss_dssp SCCCCSEECSSSCCEESS
T ss_pred CCCCCCcCCCCCCcccCC
Confidence 346777899999988753
No 105
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.48 E-value=14 Score=19.55 Aligned_cols=18 Identities=22% Similarity=0.599 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|.-
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2emh_A 7 GTGERPYICTVCGKAFTD 24 (46)
T ss_dssp CSCCCSEECTTTCCEESS
T ss_pred CCCCCCcCCCCCCchhCC
Confidence 356777899999988754
No 106
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.33 E-value=11 Score=20.05 Aligned_cols=18 Identities=22% Similarity=0.635 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eoz_A 7 GTGEKPYSCNVCGKAFVL 24 (46)
T ss_dssp CSSCCSEEETTTTEEESS
T ss_pred CCCCCCeECcccChhhCC
Confidence 346677899999988764
No 107
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.12 E-value=14 Score=19.50 Aligned_cols=19 Identities=21% Similarity=0.433 Sum_probs=14.2
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+....|+.||..|..
T Consensus 6 ~H~~~k~~~C~~C~k~F~~ 24 (46)
T 2eoo_A 6 SGSGERPYGCNECGKNFGR 24 (46)
T ss_dssp CCSCCCCEECSSSCCEESS
T ss_pred CCCCCCCEEccccCcccCC
Confidence 3456777899999988754
No 108
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...
Probab=45.85 E-value=8.1 Score=26.80 Aligned_cols=19 Identities=26% Similarity=0.674 Sum_probs=14.9
Q ss_pred ccCCCcceecCCCCceecCC
Q psy2693 51 IYHGRESEACVYCGASYLPK 70 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p~ 70 (122)
+.+|+ ..+||.||..|.-.
T Consensus 74 l~~g~-~~RC~eCG~~fkL~ 92 (98)
T 1v54_F 74 LHKGE-AQRCPSCGTHYKLV 92 (98)
T ss_dssp EESSS-CEECTTTCCEEEEE
T ss_pred EeCCC-ceECCCCCeEEEEe
Confidence 35787 78999999998743
No 109
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.84 E-value=13 Score=19.55 Aligned_cols=18 Identities=28% Similarity=0.656 Sum_probs=14.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eme_A 7 GSGEKPYVCDYCGKAFGL 24 (46)
T ss_dssp TCCCCSEECSSSCCEESS
T ss_pred CCCCCCeECCCCChhhCC
Confidence 356777899999998754
No 110
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=45.77 E-value=15 Score=19.30 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=13.6
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2el4_A 7 GTGVKPYGCSQCAKTFSL 24 (46)
T ss_dssp SCCCCSEECSSSSCEESS
T ss_pred CCCCCceECCCCCchhCC
Confidence 456777889999988754
No 111
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.76 E-value=12 Score=19.51 Aligned_cols=19 Identities=21% Similarity=0.391 Sum_probs=14.3
Q ss_pred cCCCcceecCCCCceecCC
Q psy2693 52 YHGRESEACVYCGASYLPK 70 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p~ 70 (122)
-.|+....|+.||..|...
T Consensus 7 H~~~~~~~C~~C~k~F~~~ 25 (44)
T 2eox_A 7 GTDSKSYNCNECGKAFTRI 25 (44)
T ss_dssp CCCCCCEEETTTTEEESSS
T ss_pred CCCCCCeECcccCcccCCH
Confidence 3466778999999988654
No 112
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.46 E-value=11 Score=19.96 Aligned_cols=18 Identities=22% Similarity=0.552 Sum_probs=13.4
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eq1_A 7 GTGEKPYKCNECGKAFRA 24 (46)
T ss_dssp CCCSCCCCCTTTTCCCSS
T ss_pred cCCCCCeECCcCChhhCC
Confidence 346677889999987753
No 113
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=45.45 E-value=7.2 Score=28.74 Aligned_cols=41 Identities=22% Similarity=0.554 Sum_probs=28.6
Q ss_pred CeeeecccceeccCCCcceecCCCCce-------ecCCCCCcccCcccce
Q psy2693 40 PFQICARSYTPIYHGRESEACVYCGAS-------YLPKYKGELCAVCTVS 82 (122)
Q Consensus 40 pF~ICa~S~tPIY~G~~~v~CP~CgA~-------Y~p~~kG~lC~VC~ls 82 (122)
-=.+|..+|+.+. ...+.|.+|+.. |+|+-.+-+|.+|.-.
T Consensus 70 ~C~~C~~~fg~l~--~~g~~C~~C~~~VC~~C~~~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 70 HCARCLQPYRLLL--NSRRQCLECSLFVCKSCSHAHPEEQGWLCDPCHLA 117 (153)
T ss_dssp BCTTTCCBGGGCS--SCCEECTTTCCEECGGGEECCSSSSSCEEHHHHHH
T ss_pred cchhhcCcccccc--CCCCcCCCCCchhhcccccccCCCCcEeeHHHHHH
Confidence 3567888888763 557888888753 6666667777777654
No 114
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=45.29 E-value=22 Score=34.89 Aligned_cols=64 Identities=27% Similarity=0.530 Sum_probs=47.9
Q ss_pred HHHHHHHHhcCCCCceeecCCCCCC---eeeecccceeccCCCcceecCCCCceecCCCCCcccCcccceee
Q psy2693 16 ARKLLAICNANPTDEHTIDYDEHNP---FQICARSYTPIYHGRESEACVYCGASYLPKYKGELCAVCTVSVI 84 (122)
Q Consensus 16 ArKIl~~ce~~~tDa~eIdYD~~np---F~ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~kG~lC~VC~ls~I 84 (122)
..+|.+.+.-.=++...|||-.+.| =-.|..=|-|+. ...|. ||..-.-+|+|.+|.-|++-..
T Consensus 27 pe~I~~ws~GEV~kpetinyrt~kPe~dGLFcerIFGp~k----d~eC~-Cgkyk~~~~~g~~C~~Cgvevt 93 (1407)
T 3lu0_D 27 PDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVK----DYECL-CGKYKRLKHRGVICEKCGVEVT 93 (1407)
T ss_dssp HHHHHHHBCSCCCSCCCCCSSCCSCCSSSSSCTTTTCCSS----SSCCS-SCSCCSTTCSSSCCSSSCCCCC
T ss_pred HHHHHhhcCeEECCccccccCCCCCCCCCccchhhcCCCc----CcEEe-CccccccccCCCCCCCCCCccc
Confidence 4577777777778888999975544 337888888864 55675 9965557899999999987543
No 115
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.26 E-value=14 Score=19.44 Aligned_cols=19 Identities=21% Similarity=0.475 Sum_probs=14.0
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+-.|+....|+.||..|..
T Consensus 6 ~H~~~~~~~C~~C~k~f~~ 24 (46)
T 2yso_A 6 SGSREKSHQCRECGEIFFQ 24 (46)
T ss_dssp CSSCCCCEECTTTCCEESS
T ss_pred ccCCCCCEEccccChhhCC
Confidence 3456677889999988754
No 116
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.15 E-value=13 Score=19.59 Aligned_cols=18 Identities=28% Similarity=0.639 Sum_probs=14.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ep2_A 7 GTGEKPYECSICGKSFTK 24 (46)
T ss_dssp SSCCCSEECSSSCCEESS
T ss_pred CCCCcCcCCCCCCcccCC
Confidence 356777899999998754
No 117
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=45.07 E-value=7.5 Score=29.39 Aligned_cols=15 Identities=27% Similarity=0.525 Sum_probs=11.8
Q ss_pred cCCCcceecCCCCce
Q psy2693 52 YHGRESEACVYCGAS 66 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~ 66 (122)
|.|.+...||.||+.
T Consensus 181 ~~g~~p~~CP~C~~~ 195 (202)
T 1yuz_A 181 HKGEDFEKCPICFRP 195 (202)
T ss_dssp EESSCCSBCTTTCCB
T ss_pred EcCcCCCCCCCCCCC
Confidence 346677899999985
No 118
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.69 E-value=15 Score=19.32 Aligned_cols=18 Identities=22% Similarity=0.589 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ep3_A 7 GTGEKPYRCAECGKAFTD 24 (46)
T ss_dssp SSCCCSEECSSSCCEESS
T ss_pred CCCCCCeECCCCCchhCC
Confidence 346777899999988754
No 119
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.67 E-value=11 Score=19.77 Aligned_cols=18 Identities=28% Similarity=0.517 Sum_probs=13.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eq4_A 7 GTGEKLYNCKECGKSFSR 24 (46)
T ss_dssp SSCCCCCCBTTTTBCCSC
T ss_pred CCCCCCeECCCCCCccCc
Confidence 346667889999887754
No 120
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.60 E-value=11 Score=19.77 Aligned_cols=18 Identities=17% Similarity=0.464 Sum_probs=13.1
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 7 h~~~~~~~C~~C~k~f~~ 24 (44)
T 2eou_A 7 GAAKTTSECQECGKIFRH 24 (44)
T ss_dssp CSSSCCCCCTTTCCCCSS
T ss_pred CCCCcCeECCCCCcccCC
Confidence 346667789999987753
No 121
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.55 E-value=15 Score=19.31 Aligned_cols=18 Identities=17% Similarity=0.492 Sum_probs=13.7
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|..
T Consensus 7 H~~~~~~~C~~C~k~F~~ 24 (46)
T 2em3_A 7 GTGEKPYECKVCSKAFTQ 24 (46)
T ss_dssp CSSCCSEECSSSCCEESS
T ss_pred CCCCcCeECCCCCcccCC
Confidence 346677899999988764
No 122
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=44.36 E-value=7.5 Score=21.38 Aligned_cols=15 Identities=40% Similarity=1.006 Sum_probs=8.9
Q ss_pred CCcceecCCCCceec
Q psy2693 54 GRESEACVYCGASYL 68 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~ 68 (122)
|+...+|+.||..|.
T Consensus 1 g~~~~~C~~C~~~f~ 15 (57)
T 3uk3_C 1 GSSSRECSYCGKFFR 15 (57)
T ss_dssp ----CBCTTTCCBCS
T ss_pred CCCCccCCCCcchhC
Confidence 455678999988874
No 123
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.28 E-value=17 Score=19.10 Aligned_cols=19 Identities=21% Similarity=0.508 Sum_probs=14.5
Q ss_pred cCCCcceecCCCCceecCC
Q psy2693 52 YHGRESEACVYCGASYLPK 70 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p~ 70 (122)
-.|+....|+.||..|...
T Consensus 7 H~~~k~~~C~~C~k~f~~~ 25 (46)
T 2yu8_A 7 GTGEKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCCCSSEECSSSCCEESSS
T ss_pred CCCCCCeECCcCCchhCCH
Confidence 3567778999999887643
No 124
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=44.24 E-value=15 Score=19.33 Aligned_cols=18 Identities=22% Similarity=0.482 Sum_probs=13.7
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ema_A 7 GTGEKRYKCNECGKVFSR 24 (46)
T ss_dssp CTTSCCEECSSSCCEESS
T ss_pred CCCCcCcCCCCCcchhCC
Confidence 456777899999988753
No 125
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.22 E-value=12 Score=19.78 Aligned_cols=19 Identities=21% Similarity=0.510 Sum_probs=14.2
Q ss_pred ccCCCcceecCCCCceecC
Q psy2693 51 IYHGRESEACVYCGASYLP 69 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p 69 (122)
+..|+....|++||..|..
T Consensus 6 ~H~~~~~~~C~~C~k~f~~ 24 (46)
T 2en6_A 6 SGSGEKPYGCNECGKTFSQ 24 (46)
T ss_dssp CCCSSCCEEETTTTEEESS
T ss_pred ccCCCcCeECCCCCcccCc
Confidence 3456777889999988754
No 126
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.20 E-value=13 Score=19.66 Aligned_cols=18 Identities=28% Similarity=0.628 Sum_probs=13.7
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+...+|++||..|..
T Consensus 7 h~~~k~~~C~~C~k~F~~ 24 (45)
T 2epu_A 7 GTGQKPFECTHCGKSFRA 24 (45)
T ss_dssp CCSCCSEEETTTTEEESS
T ss_pred CCCCcCccCCCCCCccCC
Confidence 356777889999988754
No 127
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.15 E-value=16 Score=19.15 Aligned_cols=18 Identities=28% Similarity=0.597 Sum_probs=13.5
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|+.||..|..
T Consensus 7 H~~~~~~~C~~C~k~f~~ 24 (46)
T 2en8_A 7 GSGEKSHTCDECGKNFCY 24 (46)
T ss_dssp CCCCSSEECTTTCCEESS
T ss_pred CCCCCCeECCCcCcccCC
Confidence 346777889999988753
No 128
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.06 E-value=9.9 Score=20.12 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=13.5
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2yti_A 7 GTGEKPYKCNECGKVFTQ 24 (46)
T ss_dssp CSCCCTTCCSSSCCCCSS
T ss_pred CCCCcCeECCCCCcccCC
Confidence 346677889999988753
No 129
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.91 E-value=12 Score=19.72 Aligned_cols=18 Identities=28% Similarity=0.676 Sum_probs=13.2
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|.....|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ep1_A 7 GTGEKPYECSDCGKSFIK 24 (46)
T ss_dssp CSSCCSSCCSSSCCCCSS
T ss_pred CCCCCCcCCCCCCchhCC
Confidence 346677889999987753
No 130
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=43.68 E-value=16 Score=19.26 Aligned_cols=18 Identities=22% Similarity=0.385 Sum_probs=13.5
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|+.||..|.-
T Consensus 7 h~~~k~~~C~~C~k~f~~ 24 (46)
T 2el6_A 7 GAGVNPYKCSQCEKSFSG 24 (46)
T ss_dssp SCCCCSEECSSSSCEESS
T ss_pred CCCCCCeECCCCCcccCC
Confidence 346777889999988753
No 131
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.60 E-value=13 Score=19.49 Aligned_cols=17 Identities=29% Similarity=0.620 Sum_probs=12.5
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|++||..|..
T Consensus 8 ~~~~~~~C~~C~k~f~~ 24 (46)
T 2eov_A 8 TGEKPYKCSDCGKSFTW 24 (46)
T ss_dssp SSCCSCBCSSSCCBCSS
T ss_pred CCCCCccCCccChhhCC
Confidence 45666789999887753
No 132
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=43.42 E-value=4 Score=27.54 Aligned_cols=14 Identities=29% Similarity=0.797 Sum_probs=7.2
Q ss_pred CCcccCcccceeec
Q psy2693 72 KGELCAVCTVSVID 85 (122)
Q Consensus 72 kG~lC~VC~ls~IG 85 (122)
.+.+|..|+=....
T Consensus 35 ~~~~C~~CGE~~~d 48 (133)
T 3o9x_A 35 HGLYCVHCEESIMN 48 (133)
T ss_dssp EEEEESSSSCEECC
T ss_pred ceeECCCCCCEeec
Confidence 34556666544443
No 133
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.29 E-value=14 Score=19.44 Aligned_cols=18 Identities=22% Similarity=0.538 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|....+|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2emy_A 7 GTGENPYECHECGKAFSR 24 (46)
T ss_dssp CCSSCCEECSSSCCEESS
T ss_pred CCCCcCcCCCCCCcccCc
Confidence 346677899999988754
No 134
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.26 E-value=14 Score=19.43 Aligned_cols=18 Identities=28% Similarity=0.567 Sum_probs=13.2
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|++||..|..
T Consensus 7 H~~~~~~~C~~C~k~f~~ 24 (46)
T 2eop_A 7 GTGEKPHECRECGKSFSF 24 (46)
T ss_dssp CCCCCSCBCTTTCCBCSS
T ss_pred cCCCCCeeCCCCCchhCC
Confidence 356677889999987653
No 135
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=43.24 E-value=11 Score=20.88 Aligned_cols=18 Identities=17% Similarity=0.327 Sum_probs=14.2
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 19 H~~~k~~~C~~C~k~f~~ 36 (54)
T 1yui_A 19 SQSEQPATCPICYAVIRQ 36 (54)
T ss_dssp HTSSCCEECTTTCCEESS
T ss_pred cCCCCCccCCCCCcccCC
Confidence 457777899999998764
No 136
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.14 E-value=13 Score=19.74 Aligned_cols=18 Identities=22% Similarity=0.442 Sum_probs=13.4
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+...+|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2emz_A 7 GSGERPFKCNECGKGFGR 24 (46)
T ss_dssp SSCCCSCCCSSSCCCCSS
T ss_pred CCCCCCeECCCCCcccCC
Confidence 346777889999987754
No 137
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.05 E-value=13 Score=19.77 Aligned_cols=18 Identities=22% Similarity=0.556 Sum_probs=13.4
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eon_A 7 GTGEKPYKCQVCGKAFRV 24 (46)
T ss_dssp CSSCCSCBCSSSCCBCSS
T ss_pred CCCCcccCCCCCCcccCc
Confidence 346677889999988754
No 138
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.00 E-value=13 Score=19.66 Aligned_cols=18 Identities=22% Similarity=0.495 Sum_probs=14.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2eq0_A 7 GTGEKPYKCHECGKVFRR 24 (46)
T ss_dssp TTCCCCEECTTTCCEESS
T ss_pred CCCCCCeECCCCCchhCC
Confidence 356777899999988754
No 139
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.78 E-value=10 Score=19.95 Aligned_cols=18 Identities=22% Similarity=0.541 Sum_probs=13.7
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|.....|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eq3_A 7 GTGEKPYECNQCGKAFSV 24 (46)
T ss_dssp SCCCCSSEETTTTEECSS
T ss_pred CCCCCCeECCCCChhhCC
Confidence 346777899999988754
No 140
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.71 E-value=17 Score=19.17 Aligned_cols=18 Identities=22% Similarity=0.523 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|..
T Consensus 7 H~~~~~~~C~~C~k~f~~ 24 (46)
T 2ytk_A 7 GSGEKPYKCNECGKVFTQ 24 (46)
T ss_dssp SSSSCSEECSSSCCEESS
T ss_pred CCCCCCEeCCcCCCccCC
Confidence 346777899999988754
No 141
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.39 E-value=18 Score=18.98 Aligned_cols=18 Identities=22% Similarity=0.560 Sum_probs=13.5
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytd_A 7 GSGEKPYKCSECGKAFHR 24 (46)
T ss_dssp SCCCCSEECSSSCCEESS
T ss_pred cCCCcCeECCCCCCeeCC
Confidence 346677889999988754
No 142
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.34 E-value=12 Score=19.38 Aligned_cols=17 Identities=24% Similarity=0.634 Sum_probs=12.5
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|.....|++||..|..
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (44)
T 2en7_A 8 TGMKPYVCNECGKAFRS 24 (44)
T ss_dssp SSSSSSCCTTTCCCCSS
T ss_pred CCCcCeECCCCCCccCC
Confidence 45667789999887653
No 143
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.28 E-value=13 Score=19.74 Aligned_cols=18 Identities=22% Similarity=0.525 Sum_probs=13.5
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2yth_A 7 GSGEKPFQCEECGKRFTQ 24 (46)
T ss_dssp CCCSSSBCCSSSCCCBSS
T ss_pred CCCCcCCCCCCCCcccCC
Confidence 346677889999988754
No 144
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.99 E-value=15 Score=19.15 Aligned_cols=17 Identities=18% Similarity=0.585 Sum_probs=13.3
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|+.||..|..
T Consensus 6 ~~~k~~~C~~C~k~f~~ 22 (44)
T 2emx_A 6 SGEKPFGCSCCEKAFSS 22 (44)
T ss_dssp SSCCCEECSSSSCEESS
T ss_pred CCCcCccCCCCCcccCC
Confidence 46677899999988754
No 145
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.96 E-value=13 Score=19.68 Aligned_cols=18 Identities=22% Similarity=0.564 Sum_probs=13.7
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|++||..|..
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2ytn_A 7 GTGKKPYKCNECGKVFTQ 24 (46)
T ss_dssp CSCCSSCBCTTTCCBCSS
T ss_pred CCCCcCeECCCCCCeeCC
Confidence 356777899999988753
No 146
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.81 E-value=15 Score=19.40 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=13.2
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2em6_A 7 GMGEKCYKCDVCGKEFSQ 24 (46)
T ss_dssp CCCCCCCBCSSSCCBCSS
T ss_pred cCCCCCeECCCCCcccCC
Confidence 346677889999987753
No 147
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=41.63 E-value=12 Score=17.09 Aligned_cols=12 Identities=17% Similarity=0.575 Sum_probs=8.6
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|+.||..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 468888877654
No 148
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.55 E-value=16 Score=19.21 Aligned_cols=18 Identities=22% Similarity=0.466 Sum_probs=13.9
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2emp_A 7 GTGVKPYMCNECGKAFSV 24 (46)
T ss_dssp SSCCCSEECSSSCCEESC
T ss_pred cCCCcCeECCCCCchhCC
Confidence 356777899999988754
No 149
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=41.19 E-value=10 Score=25.53 Aligned_cols=30 Identities=23% Similarity=0.453 Sum_probs=20.4
Q ss_pred cceecCCCCceec--CCCCCcccCcccceeec
Q psy2693 56 ESEACVYCGASYL--PKYKGELCAVCTVSVID 85 (122)
Q Consensus 56 ~~v~CP~CgA~Y~--p~~kG~lC~VC~ls~IG 85 (122)
....||+||+... |.----.|+-|+-..-|
T Consensus 26 ~~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~ag 57 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQGTGIWQCSYCDYKFTG 57 (83)
T ss_dssp SCEECSSSCCEEEEEEETTEEEETTTCCEEEC
T ss_pred ccCcCCCCCCcceeccCCCeEECCCCCCEecC
Confidence 3468999998443 44333458888888777
No 150
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.52 E-value=13 Score=19.58 Aligned_cols=18 Identities=22% Similarity=0.545 Sum_probs=13.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytr_A 7 GTGEKPYKCNECGKAFSQ 24 (46)
T ss_dssp CSSCCTTCCTTTCCCCSS
T ss_pred CCCCcCcCCCCCCCccCC
Confidence 346677889999887643
No 151
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.40 E-value=14 Score=19.50 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=14.0
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
..|+....|+.||..|..
T Consensus 7 H~~~~~~~C~~C~k~f~~ 24 (46)
T 2en1_A 7 GSGEKPFKCEECGKRFTQ 24 (46)
T ss_dssp CCCCCSEEETTTTEEESS
T ss_pred CCCCCCeeCCCCCcccCC
Confidence 456777899999988754
No 152
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.37 E-value=15 Score=19.43 Aligned_cols=18 Identities=17% Similarity=0.390 Sum_probs=13.1
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|+.||..|.-
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2en9_A 7 GAGKKLFKCNECKKTFTQ 24 (46)
T ss_dssp CCSSCCCBCTTTCCBCSS
T ss_pred CCCCCCEECCccCcccCC
Confidence 346677889999987753
No 153
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.34 E-value=20 Score=18.90 Aligned_cols=17 Identities=24% Similarity=0.585 Sum_probs=12.9
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|++||..|..
T Consensus 8 ~~~~~~~C~~C~k~f~~ 24 (46)
T 2em5_A 8 SSTKSHQCHECGRGFTL 24 (46)
T ss_dssp CCSCSEECSSSCCEESS
T ss_pred CCCCCeECCcCCCccCC
Confidence 46677889999988753
No 154
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=40.29 E-value=16 Score=19.35 Aligned_cols=18 Identities=22% Similarity=0.562 Sum_probs=12.9
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+....|++||..|.-
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2emk_A 7 GTGEKPYECKECGKAFSQ 24 (46)
T ss_dssp CSSSCSCBCSSSCCBCSC
T ss_pred cCCCCceECCCCCchhCC
Confidence 346667789999987653
No 155
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=39.90 E-value=16 Score=20.37 Aligned_cols=15 Identities=7% Similarity=0.058 Sum_probs=8.7
Q ss_pred CCcceecCCCCceec
Q psy2693 54 GRESEACVYCGASYL 68 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~ 68 (122)
|+...+|++||..|.
T Consensus 38 ~~k~~~C~~C~k~F~ 52 (54)
T 2eps_A 38 SERPHKCQVWVSGPS 52 (54)
T ss_dssp CCCCCCSSSSCCSSC
T ss_pred CCCCccCCCCCCCCC
Confidence 455556666666553
No 156
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.86 E-value=21 Score=18.63 Aligned_cols=17 Identities=29% Similarity=0.817 Sum_probs=13.1
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|+.||..|..
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2emm_A 8 TGERPHKCNECGKSFIQ 24 (46)
T ss_dssp SCCCSEECSSSCCEESS
T ss_pred CCCCCeeCCCCChhhCC
Confidence 46677889999988754
No 157
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=39.55 E-value=13 Score=17.01 Aligned_cols=12 Identities=25% Similarity=0.706 Sum_probs=8.8
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|+.||..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2m0f_A 3 LKCRECGKQFTT 14 (29)
T ss_dssp EECTTTSCEESC
T ss_pred ccCCCCCCccCC
Confidence 478888887753
No 158
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=39.53 E-value=17 Score=19.17 Aligned_cols=18 Identities=17% Similarity=0.377 Sum_probs=12.8
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|+.||..|..
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2em0_A 7 GMGEKTWKCRECDMCFSQ 24 (46)
T ss_dssp SCCCCCCCCSSSCCCCSS
T ss_pred cCCCcCeECCCCCcccCC
Confidence 346667789999887643
No 159
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.44 E-value=14 Score=23.68 Aligned_cols=13 Identities=31% Similarity=0.488 Sum_probs=7.3
Q ss_pred CcceecCCCCcee
Q psy2693 55 RESEACVYCGASY 67 (122)
Q Consensus 55 ~~~v~CP~CgA~Y 67 (122)
+....|+.||..|
T Consensus 32 ~~~~~C~~C~k~F 44 (96)
T 2ctd_A 32 KGSVSCPTCQAVG 44 (96)
T ss_dssp TSCEECTTTCSCE
T ss_pred CCCcCCCCCCCCc
Confidence 3345566666655
No 160
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.24 E-value=12 Score=19.81 Aligned_cols=17 Identities=29% Similarity=0.663 Sum_probs=13.2
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+...+|++||..|..
T Consensus 8 ~~~~~~~C~~C~k~f~~ 24 (46)
T 2eoq_A 8 TGEKPFKCDICGKSFCG 24 (46)
T ss_dssp SSSCSCCCSSSCCCCSS
T ss_pred CCCCCcCCCcCCchhCC
Confidence 46677899999988753
No 161
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.20 E-value=11 Score=19.92 Aligned_cols=17 Identities=24% Similarity=0.632 Sum_probs=13.1
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|.....|+.||..|..
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2eq2_A 8 TGGKPYQCNECGKAFSQ 24 (46)
T ss_dssp SSSCSSSCCSSCCCCSS
T ss_pred CCCCCeECCCCCcccCC
Confidence 46677889999988754
No 162
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=39.01 E-value=15 Score=20.81 Aligned_cols=16 Identities=13% Similarity=0.418 Sum_probs=12.8
Q ss_pred CCcceecCCCCceecC
Q psy2693 54 GRESEACVYCGASYLP 69 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~p 69 (122)
|+....|++||..|..
T Consensus 37 ~~~~~~C~~C~k~f~~ 52 (66)
T 2drp_A 37 NVKVYPCPFCFKEFTR 52 (66)
T ss_dssp SCCCEECTTTCCEESC
T ss_pred CCcCeECCCCCCccCC
Confidence 6677899999988753
No 163
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=38.69 E-value=12 Score=17.21 Aligned_cols=12 Identities=17% Similarity=0.517 Sum_probs=8.4
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|+.||..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 1ard_A 3 FVCEVCTRAFAR 14 (29)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCcccCC
Confidence 468888877653
No 164
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=38.36 E-value=19 Score=16.57 Aligned_cols=12 Identities=25% Similarity=0.606 Sum_probs=8.8
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|+.||..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 478888887754
No 165
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.91 E-value=14 Score=19.56 Aligned_cols=17 Identities=29% Similarity=0.690 Sum_probs=13.1
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|++||..|..
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytt_A 8 EGEKPYQCSECGKSFSG 24 (46)
T ss_dssp SCCCTTCCSSSCCCCSS
T ss_pred CCCCCeeCCCCCcccCC
Confidence 46677889999988754
No 166
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=37.54 E-value=17 Score=19.86 Aligned_cols=17 Identities=24% Similarity=0.575 Sum_probs=13.4
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|.....|++||..|..
T Consensus 25 ~~~~~~~C~~C~~~f~~ 41 (57)
T 1bbo_A 25 TDVRPYHCTYCNFSFKT 41 (57)
T ss_dssp SSCCCEECSSSSCEESS
T ss_pred CCCCCccCCCCCchhcC
Confidence 46677899999988753
No 167
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=37.41 E-value=30 Score=25.90 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceeecCCCCCCeeeecccceeccCCCcceecCCCCceecCCC-------CCcccCccc
Q psy2693 11 PVATQARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYHGRESEACVYCGASYLPKY-------KGELCAVCT 80 (122)
Q Consensus 11 ~va~qArKIl~~ce~~~tDa~eIdYD~~npF~ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~-------kG~lC~VC~ 80 (122)
+..++-+.+.+.++.... ..+--++.+|+.|+.+.- .| |.-| ||-+|-... .|..||+|+
T Consensus 82 ~~i~~~~~l~~~~~~~~~------~~~ip~~f~CPI~~elm~--DP-V~~~-~Ghtfer~~I~~~l~~~~~tcP~t~ 148 (179)
T 2f42_A 82 KYLMDMDELFSQVDEKRK------KREIPDYLCGKISFELMR--EP-CITP-SGITYDRKDIEEHLQRVGHFDPVTR 148 (179)
T ss_dssp HHHHHHHHHHHHHHHGGG------CCCCCGGGBCTTTCSBCS--SE-EECT-TSCEEEHHHHHHHHHHTCSBCTTTC
T ss_pred HHHHHHHHHHHHHhhhcc------ccCCcHhhcccCccccCC--CC-eECC-CCCEECHHHHHHHHHhCCCCCCCCc
Confidence 345566667766654311 112234678999988863 33 4434 887775432 255788886
No 168
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=37.34 E-value=15 Score=16.89 Aligned_cols=12 Identities=25% Similarity=0.537 Sum_probs=8.3
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|+.||..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1klr_A 3 YQCQYCEFRSAD 14 (30)
T ss_dssp CCCSSSSCCCSC
T ss_pred ccCCCCCCccCC
Confidence 468888877653
No 169
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=37.17 E-value=13 Score=25.89 Aligned_cols=13 Identities=23% Similarity=0.644 Sum_probs=9.7
Q ss_pred cceecCCCCceec
Q psy2693 56 ESEACVYCGASYL 68 (122)
Q Consensus 56 ~~v~CP~CgA~Y~ 68 (122)
-..+||+||+...
T Consensus 7 ~~~~~PlCG~~L~ 19 (95)
T 2k5c_A 7 HMAKCPICGSPLK 19 (95)
T ss_dssp -CEECSSSCCEEC
T ss_pred ccccCCcCCCccC
Confidence 3578999999863
No 170
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.00 E-value=24 Score=22.11 Aligned_cols=10 Identities=10% Similarity=-0.081 Sum_probs=5.2
Q ss_pred eecCCCCcee
Q psy2693 58 EACVYCGASY 67 (122)
Q Consensus 58 v~CP~CgA~Y 67 (122)
..|+.||..|
T Consensus 51 ~~C~~C~~~f 60 (115)
T 2dmi_A 51 ETDNNNPKRW 60 (115)
T ss_dssp CCCCCCCSCC
T ss_pred ccCCCCCccc
Confidence 3455555544
No 171
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=36.99 E-value=13 Score=16.98 Aligned_cols=12 Identities=25% Similarity=0.661 Sum_probs=8.3
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|+.||..|..
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 368888877653
No 172
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=36.97 E-value=14 Score=23.58 Aligned_cols=17 Identities=24% Similarity=0.726 Sum_probs=13.6
Q ss_pred CcceecCCCCceecCCC
Q psy2693 55 RESEACVYCGASYLPKY 71 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~~ 71 (122)
.|...|.+|+-+|...+
T Consensus 11 ~P~~eC~lC~vkYs~r~ 27 (55)
T 2yrk_A 11 GTKPECTLCGVKYSARL 27 (55)
T ss_dssp CCCSCCTTTTCCCCSSS
T ss_pred CCCccccccCccccccc
Confidence 35568999999998774
No 173
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.95 E-value=16 Score=19.33 Aligned_cols=17 Identities=35% Similarity=0.884 Sum_probs=12.9
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+...+|++||..|..
T Consensus 8 ~~~k~~~C~~C~k~F~~ 24 (46)
T 2eom_A 8 HGERGHRCSDCGKFFLQ 24 (46)
T ss_dssp CCCSSCCCSSSCCCCSS
T ss_pred CCCCCcCCCCCCCeeCC
Confidence 46677889999988754
No 174
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=36.71 E-value=5.4 Score=30.70 Aligned_cols=26 Identities=19% Similarity=0.618 Sum_probs=19.3
Q ss_pred eecccceec--------cCCCcceecCCCCceec
Q psy2693 43 ICARSYTPI--------YHGRESEACVYCGASYL 68 (122)
Q Consensus 43 ICa~S~tPI--------Y~G~~~v~CP~CgA~Y~ 68 (122)
.|.+-|.-| -+|...+.||+||....
T Consensus 200 ~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL~ 233 (256)
T 3na7_A 200 ACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILY 233 (256)
T ss_dssp BCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEEE
T ss_pred ccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeEE
Confidence 566655544 35888999999999765
No 175
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI, protein structure initiative; 1.80A {Sulfolobus solfataricus P2} PDB: 3irb_A
Probab=36.31 E-value=16 Score=26.43 Aligned_cols=25 Identities=28% Similarity=0.798 Sum_probs=18.8
Q ss_pred eecCCCCceecCCCCCcccCcccceee
Q psy2693 58 EACVYCGASYLPKYKGELCAVCTVSVI 84 (122)
Q Consensus 58 v~CP~CgA~Y~p~~kG~lC~VC~ls~I 84 (122)
-+|+-||..++|- -..|+-|+-..+
T Consensus 48 ~rC~~CG~~~fPP--r~~Cp~C~s~~~ 72 (145)
T 2gnr_A 48 SKCSKCGRIFVPA--RSYCEHCFVKIE 72 (145)
T ss_dssp EECTTTCCEEESC--CSEETTTTEECC
T ss_pred EEECCCCcEEeCC--CCCCCCCCCCcc
Confidence 4788888888877 568888875543
No 176
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.03 E-value=26 Score=18.35 Aligned_cols=18 Identities=22% Similarity=0.379 Sum_probs=13.4
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|+.||..|..
T Consensus 7 h~~~~~~~C~~C~k~f~~ 24 (46)
T 2ep0_A 7 GTGEKPYKCDVCHKSFRY 24 (46)
T ss_dssp STTCCSEECSSSCCEESS
T ss_pred CCCCCCeeCcccCcccCC
Confidence 346677889999988754
No 177
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.01 E-value=15 Score=19.23 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=13.5
Q ss_pred cCCCcceecCCCCceecC
Q psy2693 52 YHGRESEACVYCGASYLP 69 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p 69 (122)
-.|+...+|+.||..|..
T Consensus 7 H~~~~~~~C~~C~k~F~~ 24 (46)
T 2eoe_A 7 GTGEKPYKCNECGKVFTQ 24 (46)
T ss_dssp CCCCCSSEETTTTEECSS
T ss_pred CCCCCCeECCCcChhhCC
Confidence 356777899999988753
No 178
>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}
Probab=35.97 E-value=14 Score=24.37 Aligned_cols=29 Identities=21% Similarity=0.598 Sum_probs=17.0
Q ss_pred CCcceecCCCCceecCCCC------CcccCcccce
Q psy2693 54 GRESEACVYCGASYLPKYK------GELCAVCTVS 82 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~p~~k------G~lC~VC~ls 82 (122)
++....|.-||+.--|.+. |.||.-|+|-
T Consensus 5 ~~~~~~C~nC~tt~Tp~WRrg~~~~g~LCNACGl~ 39 (71)
T 2kae_A 5 NKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIY 39 (71)
T ss_dssp ---CCCCSSSCCSCCSSCCCCSSSSCCCSSHHHHH
T ss_pred CCCCCcCCccCCCCCCccccCCCCCCccchHHHHH
Confidence 3445566666666555443 6788888774
No 179
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.58 E-value=19 Score=18.87 Aligned_cols=17 Identities=18% Similarity=0.428 Sum_probs=12.5
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|+.||..|..
T Consensus 6 ~~~k~~~C~~C~k~f~~ 22 (43)
T 2yrm_A 6 SGNGAFFCNECDCRFSE 22 (43)
T ss_dssp SSSCCBCCSSSCCCBSS
T ss_pred CCCCCEECCCCCCeeCC
Confidence 45666789999988753
No 180
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=35.50 E-value=18 Score=20.82 Aligned_cols=27 Identities=19% Similarity=0.496 Sum_probs=17.9
Q ss_pred eecccceec---------cCCCcceecCCCCceecC
Q psy2693 43 ICARSYTPI---------YHGRESEACVYCGASYLP 69 (122)
Q Consensus 43 ICa~S~tPI---------Y~G~~~v~CP~CgA~Y~p 69 (122)
.|..+|.-- ..|.....|++||..|..
T Consensus 26 ~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 61 (73)
T 1f2i_G 26 SCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR 61 (73)
T ss_dssp TBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred CCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCC
Confidence 477776532 236667889999887753
No 181
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=35.00 E-value=26 Score=20.33 Aligned_cols=16 Identities=31% Similarity=0.835 Sum_probs=10.1
Q ss_pred cCCCcceecCCCCcee
Q psy2693 52 YHGRESEACVYCGASY 67 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y 67 (122)
-.|+....|++|+..|
T Consensus 9 H~~~k~~~C~~C~k~f 24 (72)
T 1x6e_A 9 HSGEKPYGCVECGKAF 24 (72)
T ss_dssp TTTCCCEECSSSCCEE
T ss_pred cCCCCCccCCCCCCcc
Confidence 3455566777777665
No 182
>2y69_F Cytochrome C oxidase subunit 5B; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=34.46 E-value=15 Score=26.76 Aligned_cols=19 Identities=26% Similarity=0.674 Sum_probs=14.8
Q ss_pred ccCCCcceecCCCCceecCC
Q psy2693 51 IYHGRESEACVYCGASYLPK 70 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~p~ 70 (122)
+.+|+ ..+||.||..|+=.
T Consensus 105 L~kg~-p~RCpeCG~~fkL~ 123 (129)
T 2y69_F 105 LHKGE-AQRCPSCGTHYKLV 123 (129)
T ss_dssp EESSS-CEECTTTCCEEEEE
T ss_pred EeCCC-ceeCCCCCeEEEEe
Confidence 35787 68999999998743
No 183
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=34.34 E-value=19 Score=19.90 Aligned_cols=17 Identities=12% Similarity=0.456 Sum_probs=13.2
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|.....|++||..|..
T Consensus 26 ~~~~~~~C~~C~~~f~~ 42 (60)
T 2adr_A 26 TNEKPYPCGLCNRAFTR 42 (60)
T ss_dssp TSSCSEECTTTCCEESS
T ss_pred CCCCCccCCCCCCccCC
Confidence 46677899999988753
No 184
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=32.85 E-value=17 Score=20.06 Aligned_cols=17 Identities=18% Similarity=0.458 Sum_probs=13.6
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+...+|+.||.+|..
T Consensus 4 ~gekp~~C~~CgK~F~~ 20 (36)
T 1fv5_A 4 LKPARFMCLPCGIAFSS 20 (36)
T ss_dssp SSCCCCEETTTTEECSC
T ss_pred CCccCeECCCCCCccCC
Confidence 36778899999998864
No 185
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M
Probab=32.56 E-value=12 Score=30.19 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=17.4
Q ss_pred ceecCCCCc---e--ecCCCCCcccCcccce
Q psy2693 57 SEACVYCGA---S--YLPKYKGELCAVCTVS 82 (122)
Q Consensus 57 ~v~CP~CgA---~--Y~p~~kG~lC~VC~ls 82 (122)
...||.||. . +..+---.+|.-|++-
T Consensus 21 ~~~Cp~C~~~~~~lv~D~~~G~~vC~~CGlV 51 (345)
T 4bbr_M 21 VLTCPECKVYPPKIVERFSEGDVVCALCGLV 51 (345)
T ss_dssp -CCCSSCCCSSCCEEEEGGGTEEEETTTCBE
T ss_pred CCcCCCCCCCCCceeEECCCCcEEeCCCCCC
Confidence 457999996 2 3344456789999864
No 186
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=32.54 E-value=34 Score=20.95 Aligned_cols=15 Identities=13% Similarity=0.505 Sum_probs=10.5
Q ss_pred CCCcceecCCCCcee
Q psy2693 53 HGRESEACVYCGASY 67 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y 67 (122)
.+.....|++|+..|
T Consensus 41 ~~~~~~~C~~C~~~f 55 (106)
T 2ee8_A 41 TDERPYTCDICHKAF 55 (106)
T ss_dssp CCSCCCBCSSSCCBC
T ss_pred CCCCCcCCCCccchh
Confidence 355667788888766
No 187
>1vzy_A 33 kDa chaperonin; chaperone, heat shock protein, crystal engineering, molecular chaperone, redox-active center, PSI; 1.97A {Bacillus subtilis} SCOP: d.193.1.1 g.81.1.1
Probab=32.46 E-value=13 Score=29.73 Aligned_cols=15 Identities=33% Similarity=1.039 Sum_probs=13.2
Q ss_pred CCcceecCCCCceec
Q psy2693 54 GRESEACVYCGASYL 68 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~ 68 (122)
|.-.+.|.|||..|.
T Consensus 262 g~iev~C~FC~~~Y~ 276 (291)
T 1vzy_A 262 GQAEAVCHFCNEKYL 276 (291)
T ss_dssp SEEEEECTTTCCEEE
T ss_pred CCEEEEeeCCCCEEE
Confidence 677899999999996
No 188
>1hqm_D DNA-directed RNA polymerase; transferase, transcription, 3D- structure; 3.30A {Thermus aquaticus} SCOP: i.8.1.1 PDB: 1i6v_D* 2gho_D
Probab=32.19 E-value=19 Score=34.76 Aligned_cols=61 Identities=25% Similarity=0.520 Sum_probs=16.5
Q ss_pred HHHHHhcCCCCceeecCCCCCC---eeeecccceeccCCCcceecCCCCceecCCCCCcccCcccceee
Q psy2693 19 LLAICNANPTDEHTIDYDEHNP---FQICARSYTPIYHGRESEACVYCGASYLPKYKGELCAVCTVSVI 84 (122)
Q Consensus 19 Il~~ce~~~tDa~eIdYD~~np---F~ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~kG~lC~VC~ls~I 84 (122)
|.+.+.-.=+..-.+||..+.| =..|..=|.|+ ....| .||..-...|+|.+|..|++.-.
T Consensus 18 Ir~~S~geV~~pet~ny~t~kP~~~GLfd~rifGp~----k~~~C-~Cgkyk~~~~~~~~C~~Cg~~~~ 81 (1265)
T 1hqm_D 18 IRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPI----KDYEC-ACGKYKRQRFEGKVCERCGVEVT 81 (1265)
T ss_dssp HHHHTTTCCCCCCC------------------------------------------CCSCSSSSSSSSC
T ss_pred HHHhhEEEEcchhheecCCCcccCCCCcCccccCCC----cccee-cCCCccccCCCCCCCCCCCCccc
Confidence 3334443344555667754444 23667766775 34467 48854447888999999987443
No 189
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=32.05 E-value=18 Score=25.58 Aligned_cols=13 Identities=15% Similarity=0.539 Sum_probs=8.2
Q ss_pred CcceecCCCCcee
Q psy2693 55 RESEACVYCGASY 67 (122)
Q Consensus 55 ~~~v~CP~CgA~Y 67 (122)
....+||.|++.-
T Consensus 82 ~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 82 NIPSRCPKCKSEW 94 (105)
T ss_dssp SCCSSCSSSCCCC
T ss_pred CCCCCCcCCCCCc
Confidence 3446777777653
No 190
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=38.17 E-value=9.7 Score=17.73 Aligned_cols=12 Identities=17% Similarity=0.642 Sum_probs=8.6
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|++||..|..
T Consensus 4 ~~C~~C~k~f~~ 15 (30)
T 2lvr_A 4 YVCIHCQRQFAD 15 (30)
Confidence 478888877653
No 191
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=31.90 E-value=21 Score=16.48 Aligned_cols=12 Identities=25% Similarity=0.645 Sum_probs=8.1
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|+.||..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 468888877643
No 192
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.10 E-value=9.8 Score=17.47 Aligned_cols=13 Identities=23% Similarity=0.756 Sum_probs=9.4
Q ss_pred eecCCCCceecCC
Q psy2693 58 EACVYCGASYLPK 70 (122)
Q Consensus 58 v~CP~CgA~Y~p~ 70 (122)
..|+.||..|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 3 YVCERCGKRFVQS 15 (26)
Confidence 4688898877643
No 193
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=31.62 E-value=22 Score=20.71 Aligned_cols=15 Identities=33% Similarity=0.702 Sum_probs=8.5
Q ss_pred CCCcceecCCCCcee
Q psy2693 53 HGRESEACVYCGASY 67 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y 67 (122)
.|....+|+.||..|
T Consensus 13 ~~~~~~~C~~C~k~f 27 (74)
T 2lce_A 13 HSDKPYKCDRCQASF 27 (74)
T ss_dssp CCCCSBCCTTSSCCB
T ss_pred CCCCCeECCCCCcee
Confidence 345555666666555
No 194
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.55 E-value=24 Score=20.24 Aligned_cols=14 Identities=21% Similarity=1.023 Sum_probs=11.0
Q ss_pred CcceecCCCCceec
Q psy2693 55 RESEACVYCGASYL 68 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~ 68 (122)
....+|++||..|.
T Consensus 8 ~~~~~C~~C~k~f~ 21 (66)
T 2eod_A 8 KRTQPCTYCTKEFV 21 (66)
T ss_dssp CCEEECSSSCCEEE
T ss_pred CCCeeccccCCccC
Confidence 45678999998874
No 195
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.46 E-value=31 Score=20.15 Aligned_cols=17 Identities=24% Similarity=0.575 Sum_probs=10.7
Q ss_pred cCCCcceecCCCCceec
Q psy2693 52 YHGRESEACVYCGASYL 68 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~ 68 (122)
..|+....|++|+..|.
T Consensus 10 H~~~k~~~C~~C~k~f~ 26 (77)
T 2ct1_A 10 HSGEKPYECYICHARFT 26 (77)
T ss_dssp CSCCCSEECTTTCCEES
T ss_pred cCCCCCeECCCcCchhC
Confidence 34556667777776653
No 196
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=30.69 E-value=18 Score=28.31 Aligned_cols=28 Identities=18% Similarity=0.304 Sum_probs=20.9
Q ss_pred CcceecCCCCc-----eecCCCCCcccCcccce
Q psy2693 55 RESEACVYCGA-----SYLPKYKGELCAVCTVS 82 (122)
Q Consensus 55 ~~~v~CP~CgA-----~Y~p~~kG~lC~VC~ls 82 (122)
.....||.||. .+..+---.+|.-|++-
T Consensus 19 n~~~~CPECGs~~t~IV~D~erGE~VCsdCGLV 51 (197)
T 3k1f_M 19 NIVLTCPECKVYPPKIVERFSEGDVVCALCGLV 51 (197)
T ss_dssp CCCCCCTTTCCSSCCEEEEGGGTEEEETTTCBB
T ss_pred ccCeECcCCCCcCCeEEEeCCCCEEEEcCCCCC
Confidence 44558999998 34456667899999985
No 197
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=30.39 E-value=23 Score=21.34 Aligned_cols=27 Identities=37% Similarity=0.896 Sum_probs=14.3
Q ss_pred CcceecCCCCceecCCCC-----CcccCcccc
Q psy2693 55 RESEACVYCGASYLPKYK-----GELCAVCTV 81 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~~k-----G~lC~VC~l 81 (122)
++...|.-||+.--|.+. ..||..|+|
T Consensus 2 ~~~~~C~~C~tt~Tp~WR~gp~G~~LCNaCGl 33 (46)
T 1gnf_A 2 SEARECVNCGATATPLWRRDRTGHYLCNACGL 33 (46)
T ss_dssp CCSCCCTTTCCCCCSSCBCCTTCCCBCSHHHH
T ss_pred CCCCCCCCcCCCCCCcCccCCCCCccchHHHH
Confidence 344455555555554321 257777765
No 198
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=30.20 E-value=19 Score=18.87 Aligned_cols=15 Identities=27% Similarity=0.784 Sum_probs=11.9
Q ss_pred CCcceecCCCCceec
Q psy2693 54 GRESEACVYCGASYL 68 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~ 68 (122)
|+...+|+.||..|.
T Consensus 7 ~~k~~~C~~C~k~f~ 21 (45)
T 2epq_A 7 GEKPYSCPVCGLRFK 21 (45)
T ss_dssp SCCSSEETTTTEECS
T ss_pred CCCCCcCCCCCcccC
Confidence 566788999998874
No 199
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.86 E-value=26 Score=20.49 Aligned_cols=15 Identities=27% Similarity=0.612 Sum_probs=12.3
Q ss_pred CCcceecCCCCceec
Q psy2693 54 GRESEACVYCGASYL 68 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~ 68 (122)
|+...+|+.||..|.
T Consensus 4 ~~k~~~C~~C~k~f~ 18 (78)
T 2d9h_A 4 GSSGLQCEICGFTCR 18 (78)
T ss_dssp SCCCEECSSSCCEES
T ss_pred CCcCeECCCCCCeeC
Confidence 567788999998884
No 200
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=28.91 E-value=14 Score=26.77 Aligned_cols=27 Identities=11% Similarity=0.220 Sum_probs=19.9
Q ss_pred eecCCCCceecCCCCCcccCcccceee
Q psy2693 58 EACVYCGASYLPKYKGELCAVCTVSVI 84 (122)
Q Consensus 58 v~CP~CgA~Y~p~~kG~lC~VC~ls~I 84 (122)
-.||+|++....+.+.-.|..|..--+
T Consensus 3 ~~Cp~C~~~~~~~~~~~~C~~~~~~~~ 29 (269)
T 1p91_A 3 FSCPLCHQPLSREKNSYICPQRHQFDM 29 (269)
T ss_dssp BBCTTTCCBCEEETTEEECTTCCEEEB
T ss_pred ccCCCCCccceeCCCEEECCCCCcCCc
Confidence 469999998776656668988875433
No 201
>1vq0_A 33 kDa chaperonin; TM1394, joint center for structural genomics, protein structure initiative, PSI, chaperone; HET: UNL; 2.20A {Thermotoga maritima} SCOP: d.193.1.1 g.81.1.1
Probab=28.61 E-value=20 Score=28.93 Aligned_cols=15 Identities=20% Similarity=0.687 Sum_probs=13.4
Q ss_pred CCCcceecCCCCceec
Q psy2693 53 HGRESEACVYCGASYL 68 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~ 68 (122)
.| -.+.|.|||..|.
T Consensus 269 ~g-iev~C~FC~~~Y~ 283 (302)
T 1vq0_A 269 GK-GEVVCKWCNTRYV 283 (302)
T ss_dssp TC-EEEECTTTCCEEE
T ss_pred CC-cEEEeeCCCCEEE
Confidence 47 8999999999996
No 202
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.53 E-value=35 Score=20.79 Aligned_cols=8 Identities=25% Similarity=0.796 Sum_probs=4.5
Q ss_pred cccCcccc
Q psy2693 74 ELCAVCTV 81 (122)
Q Consensus 74 ~lC~VC~l 81 (122)
..|++|..
T Consensus 57 ~~CP~Cr~ 64 (88)
T 2ct2_A 57 VRCPFCSK 64 (88)
T ss_dssp BCCTTTCC
T ss_pred cCCCCCCC
Confidence 45666653
No 203
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.28 E-value=31 Score=19.74 Aligned_cols=15 Identities=27% Similarity=0.457 Sum_probs=11.8
Q ss_pred CCcceecCCCCceec
Q psy2693 54 GRESEACVYCGASYL 68 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~ 68 (122)
|+....|+.|+..|.
T Consensus 6 ~~~~~~C~~C~k~f~ 20 (70)
T 1x5w_A 6 SGHPEKCSECSYSCS 20 (70)
T ss_dssp CCCSEECSSSSCEES
T ss_pred CCCCeECCCCCcccC
Confidence 466789999998774
No 204
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=34.26 E-value=12 Score=17.41 Aligned_cols=12 Identities=33% Similarity=0.941 Sum_probs=8.8
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|+.||..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2lvt_A 3 CQCVMCGKAFTQ 14 (29)
Confidence 468888887754
No 205
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.00 E-value=29 Score=23.01 Aligned_cols=16 Identities=19% Similarity=0.341 Sum_probs=13.5
Q ss_pred CCCcceecCCCCceec
Q psy2693 53 HGRESEACVYCGASYL 68 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~ 68 (122)
+|+....|++||..|.
T Consensus 14 ~gekpy~C~~Cgk~F~ 29 (102)
T 2ghf_A 14 KVEGGYECKYCTFQTP 29 (102)
T ss_dssp CCCSSEECSSCSCEES
T ss_pred CCCcCcCCCCCCCccC
Confidence 6888899999998873
No 206
>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone, chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A
Probab=27.67 E-value=13 Score=29.81 Aligned_cols=16 Identities=44% Similarity=1.003 Sum_probs=0.0
Q ss_pred CCCcceecCCCCceec
Q psy2693 53 HGRESEACVYCGASYL 68 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~ 68 (122)
.|.-.+.|.|||..|.
T Consensus 256 ~g~iev~C~FC~~~Y~ 271 (292)
T 1i7f_A 256 DGEIDMHCDYCGNHYL 271 (292)
T ss_dssp ----------------
T ss_pred CCCEEEEeeCCCCEEE
Confidence 3677999999999997
No 207
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=27.50 E-value=28 Score=18.61 Aligned_cols=16 Identities=31% Similarity=0.704 Sum_probs=12.3
Q ss_pred CCCcceecCCCCceec
Q psy2693 53 HGRESEACVYCGASYL 68 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~ 68 (122)
.++....|++||..|.
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (48)
T 2epr_A 8 RTRKQVACEICGKIFR 23 (48)
T ss_dssp CCCCSEEETTTTEEES
T ss_pred CCCcCeeCCCCCcccC
Confidence 3566789999998874
No 208
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=27.45 E-value=37 Score=17.02 Aligned_cols=17 Identities=24% Similarity=0.579 Sum_probs=12.5
Q ss_pred CCCcceecCC--CCceecC
Q psy2693 53 HGRESEACVY--CGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~--CgA~Y~p 69 (122)
.|+....|++ ||..|..
T Consensus 4 ~~~k~~~C~~~~C~k~f~~ 22 (37)
T 1va1_A 4 GKKKQHICHIQGCGKVYGK 22 (37)
T ss_dssp SSCCCEECCSTTCCCEESC
T ss_pred CCCCCCCCCCCCCCCccCC
Confidence 4566778986 9988754
No 209
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=27.13 E-value=21 Score=24.16 Aligned_cols=23 Identities=22% Similarity=0.712 Sum_probs=16.0
Q ss_pred CcceecCCCCceecCCCCCcccCccc
Q psy2693 55 RESEACVYCGASYLPKYKGELCAVCT 80 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~~kG~lC~VC~ 80 (122)
.....|+.|++.|.+. + +|+-|+
T Consensus 16 ~~~~~C~~C~~~~~~~--a-fCPeCg 38 (81)
T 2jrp_A 16 GDTAHCETCAKDFSLQ--A-LCPDCR 38 (81)
T ss_dssp SSEEECTTTCCEEEEE--E-ECSSSC
T ss_pred CCceECccccccCCCc--c-cCcchh
Confidence 3366688888887776 3 777775
No 210
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.65 E-value=42 Score=18.80 Aligned_cols=30 Identities=27% Similarity=0.685 Sum_probs=19.6
Q ss_pred cCCCcceecCCCCceecCCC-----CCcccCcccc
Q psy2693 52 YHGRESEACVYCGASYLPKY-----KGELCAVCTV 81 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~p~~-----kG~lC~VC~l 81 (122)
-.|.....|+.||..|.... +.-.|.+|+-
T Consensus 13 h~~~~~~~C~~C~k~f~~~~~l~~~~~~~C~~C~~ 47 (73)
T 2ctu_A 13 HLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEKCRK 47 (73)
T ss_dssp CCCCSEEECSSSCCEEECCCCCCCSSSCCCHHHHH
T ss_pred hCCCCCeeCCcccchhCCHHHhCcCCCCCCCCCCh
Confidence 35677789999998886432 2335666654
No 211
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=26.57 E-value=1.1e+02 Score=20.36 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=29.4
Q ss_pred CCeeeecccceeccCCCcceecCCCCceecCCCC---CcccCcccce
Q psy2693 39 NPFQICARSYTPIYHGRESEACVYCGASYLPKYK---GELCAVCTVS 82 (122)
Q Consensus 39 npF~ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~k---G~lC~VC~ls 82 (122)
+-+..-.-.|.+..-..| ..|-+|+...---++ |-.|.+|.+.
T Consensus 18 ~~~~~~~H~F~~~~~~~P-T~Cd~C~~~lWGl~kqp~G~~C~~C~~~ 63 (84)
T 2row_A 18 NYICHKGHEFIPTLYHFP-TNCEACMKPLWHMFKPPPALECRRCHIK 63 (84)
T ss_dssp CCEEETTEEEEEECCSSC-EECSSSSSEECCSSSCCCEEEESSSCCE
T ss_pred ceEEcCCcceEeEcCCCC-cchhhcCHhhhccccCCCCCEecCCCCc
Confidence 445566667777533333 679999988776666 7788888764
No 212
>2k2d_A Ring finger and CHY zinc finger domain- containing protein 1; zinc-binding protein, cytoplasm, metal-binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=26.09 E-value=29 Score=22.84 Aligned_cols=36 Identities=17% Similarity=0.439 Sum_probs=21.8
Q ss_pred ccceeccCCCc-ceecCCCCceecCCC--CCcccCcccc
Q psy2693 46 RSYTPIYHGRE-SEACVYCGASYLPKY--KGELCAVCTV 81 (122)
Q Consensus 46 ~S~tPIY~G~~-~v~CP~CgA~Y~p~~--kG~lC~VC~l 81 (122)
.-+-+.|+.++ .+.|.-|+++....| -|..|+.|+=
T Consensus 25 ~pmP~~y~~~~v~I~CnDC~~~s~v~~h~lg~kC~~C~S 63 (79)
T 2k2d_A 25 TPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKICES 63 (79)
T ss_dssp --------CCEEEEEESSSCCEEEEECCTTCCCCTTTSC
T ss_pred CCCCHHHhCCEeEEECCCCCCCccCCceeecccCcCCCC
Confidence 33455788875 589999999988765 4557998863
No 213
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=26.02 E-value=38 Score=22.37 Aligned_cols=30 Identities=20% Similarity=0.634 Sum_probs=18.2
Q ss_pred cceecCCCCceecCCCCCcc--cCcccceeec
Q psy2693 56 ESEACVYCGASYLPKYKGEL--CAVCTVSVID 85 (122)
Q Consensus 56 ~~v~CP~CgA~Y~p~~kG~l--C~VC~ls~IG 85 (122)
....|||||..-...-.--| |.-|+-.-=|
T Consensus 25 ~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AG 56 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAG 56 (72)
T ss_dssp SCBCCSSCCSSCBSBCSSSCBCCSSSCCCCCC
T ss_pred cCccCCCCCCceeEecCCCeEECCCCCCEEeC
Confidence 34579999976544433233 7777665554
No 214
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=25.96 E-value=36 Score=20.31 Aligned_cols=15 Identities=33% Similarity=0.782 Sum_probs=10.7
Q ss_pred CCcceecCCCCceec
Q psy2693 54 GRESEACVYCGASYL 68 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~ 68 (122)
|+....|++|+..|.
T Consensus 4 ~~~~~~C~~C~~~f~ 18 (95)
T 2yt9_A 4 GSSGVACEICGKIFR 18 (95)
T ss_dssp CCSCEECSSSCCEES
T ss_pred CCCCeECCCCCCccC
Confidence 566677888887774
No 215
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.67 E-value=25 Score=20.41 Aligned_cols=14 Identities=21% Similarity=0.460 Sum_probs=8.9
Q ss_pred CCcceecCCCCcee
Q psy2693 54 GRESEACVYCGASY 67 (122)
Q Consensus 54 G~~~v~CP~CgA~Y 67 (122)
|+....|++||..|
T Consensus 65 ~~~~~~C~~C~k~F 78 (79)
T 2dlk_A 65 DTRDYICEFSGPSS 78 (79)
T ss_dssp TSCCCSCCSSSCCC
T ss_pred CCCCeeCCCCCCCC
Confidence 55566677776654
No 216
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=25.24 E-value=20 Score=24.31 Aligned_cols=21 Identities=29% Similarity=0.417 Sum_probs=17.4
Q ss_pred CCCcceecCCCCceecCCCCC
Q psy2693 53 HGRESEACVYCGASYLPKYKG 73 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p~~kG 73 (122)
.+++.+.|.-|+..||+.--+
T Consensus 22 ~~~~Ll~C~~C~~~~H~~Cl~ 42 (112)
T 3v43_A 22 KPEELISCADCGNSGHPSCLK 42 (112)
T ss_dssp CCCCCEECTTTCCEECHHHHT
T ss_pred CchhceEhhhcCCCCCCchhc
Confidence 356899999999999987654
No 217
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=25.02 E-value=35 Score=20.42 Aligned_cols=17 Identities=24% Similarity=0.632 Sum_probs=14.0
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|+.||..|..
T Consensus 28 t~ekp~~C~~C~k~F~~ 44 (60)
T 4gzn_C 28 LGYRPRSCPECGKCFRD 44 (60)
T ss_dssp HTCCCEECTTTCCEESS
T ss_pred CCCcCeECCCCCCCcCC
Confidence 47888999999998864
No 218
>1h7b_A Anaerobic ribonucleotide-triphosphate reductase large chain; oxidoreductase, allosteric regulation, substrate specificity; 2.45A {Bacteriophage T4} SCOP: c.7.1.3 PDB: 1h79_A* 1h7a_A* 1h78_A 1hk8_A*
Probab=24.64 E-value=19 Score=31.81 Aligned_cols=8 Identities=38% Similarity=1.273 Sum_probs=0.0
Q ss_pred CcccCccc
Q psy2693 73 GELCAVCT 80 (122)
Q Consensus 73 G~lC~VC~ 80 (122)
+..||.|+
T Consensus 558 ~~~CP~Cg 565 (605)
T 1h7b_A 558 GFVCSICG 565 (605)
T ss_dssp --------
T ss_pred CCcCCCCC
Confidence 34455554
No 219
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=24.61 E-value=32 Score=26.44 Aligned_cols=25 Identities=16% Similarity=0.137 Sum_probs=18.0
Q ss_pred cceecCCCCceecCCCC----CcccCccc
Q psy2693 56 ESEACVYCGASYLPKYK----GELCAVCT 80 (122)
Q Consensus 56 ~~v~CP~CgA~Y~p~~k----G~lC~VC~ 80 (122)
..-.||-||..|+-.|. ..+|.+|+
T Consensus 130 ~R~~~~~~G~~Yh~~~~pp~~~~~~d~~g 158 (230)
T 3gmt_A 130 GRRTHPASGRTYHVKFNPPKVEGKDDVTG 158 (230)
T ss_dssp TEEEETTTTEEEETTTBCCSSTTBCTTTC
T ss_pred cCCcccccCCcccccCCCCCccCcCCCcc
Confidence 34569999999986553 34677775
No 220
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.57 E-value=63 Score=19.67 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=17.1
Q ss_pred eecccceeccCCCcceecCCCCceecCCCCCcccCcccc
Q psy2693 43 ICARSYTPIYHGRESEACVYCGASYLPKYKGELCAVCTV 81 (122)
Q Consensus 43 ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~kG~lC~VC~l 81 (122)
.|+.=-.||+ +. .+. .-+..||++- -.|..|+.
T Consensus 17 ~C~~C~~~I~-~~-~~~--a~~~~~H~~C--F~C~~C~~ 49 (81)
T 1x6a_A 17 FCHGCSLLMT-GP-FMV--AGEFKYHPEC--FACMSCKV 49 (81)
T ss_dssp BCTTTCCBCC-SC-CBC--CTTCCBCTTS--CBCTTTCC
T ss_pred cCccCCCCcC-ce-EEE--ECCceecccc--CCccCCCC
Confidence 5666667776 32 222 2356666662 24555543
No 221
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=24.46 E-value=19 Score=17.62 Aligned_cols=11 Identities=27% Similarity=0.703 Sum_probs=8.2
Q ss_pred eecCCCCceec
Q psy2693 58 EACVYCGASYL 68 (122)
Q Consensus 58 v~CP~CgA~Y~ 68 (122)
.+|+.||..|.
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 46888887764
No 222
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=24.28 E-value=34 Score=21.90 Aligned_cols=28 Identities=25% Similarity=0.731 Sum_probs=19.9
Q ss_pred eeecccceec---------cCCCcceecCCCCceecC
Q psy2693 42 QICARSYTPI---------YHGRESEACVYCGASYLP 69 (122)
Q Consensus 42 ~ICa~S~tPI---------Y~G~~~v~CP~CgA~Y~p 69 (122)
.+|..+|+-. -.|+....|++||..|.-
T Consensus 32 ~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~ 68 (85)
T 2lv2_A 32 PVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYS 68 (85)
T ss_dssp TTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESS
T ss_pred CCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCC
Confidence 3677777643 247778889999988753
No 223
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=24.22 E-value=1e+02 Score=21.61 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=27.9
Q ss_pred CCCCceeecCCCCCCeeeecccceeccCCCcceecCCCCcee
Q psy2693 26 NPTDEHTIDYDEHNPFQICARSYTPIYHGRESEACVYCGASY 67 (122)
Q Consensus 26 ~~tDa~eIdYD~~npF~ICa~S~tPIY~G~~~v~CP~CgA~Y 67 (122)
..-|.-+..+|+....+|-+.+... ..++.+.||-||...
T Consensus 41 r~p~~k~y~~~~~~~lDIfG~~~~~--~~s~~~~C~nC~R~v 80 (99)
T 3mhs_C 41 RYPDLRSYYFDPNGSLDINGLQKQQ--ESSQYIHCENCGRDV 80 (99)
T ss_dssp HCTTCCCCCCCTTSCSCTTSCCCCC--TTSCEEECTTTCCEE
T ss_pred cCCCCCCceecCCCCcccCCCcCcc--cCCCeEECCCCCCCc
Confidence 3344456666777777777766553 568999999999754
No 224
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=24.11 E-value=70 Score=25.73 Aligned_cols=28 Identities=11% Similarity=-0.090 Sum_probs=22.0
Q ss_pred cCCChHHHHHHHHHHHHHhcCCCCceee
Q psy2693 6 KFQIIPVATQARKLLAICNANPTDEHTI 33 (122)
Q Consensus 6 l~p~~~va~qArKIl~~ce~~~tDa~eI 33 (122)
..|+++..+.||+|+.+.++.+.-++.+
T Consensus 266 f~Ps~~ei~~A~~il~a~~~~g~G~~~~ 293 (339)
T 3r4i_A 266 FAPRDEEITTATEILLAAQSAQWGPTRY 293 (339)
T ss_dssp TSCCTHHHHHHHHHHHHHHHTTTSCEEE
T ss_pred hCCCHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 3577889999999999887776666654
No 225
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=23.52 E-value=38 Score=19.47 Aligned_cols=16 Identities=25% Similarity=0.812 Sum_probs=11.3
Q ss_pred CCCcceecCCCCceec
Q psy2693 53 HGRESEACVYCGASYL 68 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~ 68 (122)
.|.....|+.||..|.
T Consensus 53 ~~~~~~~C~~C~~~f~ 68 (82)
T 2kmk_A 53 TGEKPHKCQVCGKAFS 68 (82)
T ss_dssp HTCCCEECTTTSCEES
T ss_pred cCCCCCcCCCcchhhC
Confidence 3566677888887764
No 226
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.38 E-value=35 Score=19.89 Aligned_cols=16 Identities=31% Similarity=0.634 Sum_probs=13.1
Q ss_pred CCCcceecCCCCceec
Q psy2693 53 HGRESEACVYCGASYL 68 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~ 68 (122)
+|+....|+.|+..|.
T Consensus 14 ~~~~~~~C~~C~~~f~ 29 (77)
T 2cot_A 14 RERRRYKCDECGKSFS 29 (77)
T ss_dssp CCSCSSBCSSSCCBCS
T ss_pred CCCCCEECCCCCcccC
Confidence 4677789999998875
No 227
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=23.29 E-value=28 Score=17.14 Aligned_cols=12 Identities=25% Similarity=0.606 Sum_probs=8.5
Q ss_pred eecCCCCceecC
Q psy2693 58 EACVYCGASYLP 69 (122)
Q Consensus 58 v~CP~CgA~Y~p 69 (122)
..|+.||..|..
T Consensus 3 ~~C~~C~k~F~~ 14 (33)
T 1rim_A 3 FACPECPKRFMR 14 (33)
T ss_dssp CCCSSSCCCCSS
T ss_pred ccCCCCCchhCC
Confidence 468888887653
No 228
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=23.11 E-value=33 Score=22.76 Aligned_cols=45 Identities=11% Similarity=-0.058 Sum_probs=27.2
Q ss_pred ecCCCCCCeeeecccceeccCCCcceecCCCCceecCCC------CCcccCcccc
Q psy2693 33 IDYDEHNPFQICARSYTPIYHGRESEACVYCGASYLPKY------KGELCAVCTV 81 (122)
Q Consensus 33 IdYD~~npF~ICa~S~tPIY~G~~~v~CP~CgA~Y~p~~------kG~lC~VC~l 81 (122)
.++.+--...+|+.++.+. +..|.-| ||-+|-... ....|++|+-
T Consensus 21 ~~~~~~p~~~~CpI~~~~m---~dPV~~~-cGhtf~r~~I~~~l~~~~~cP~~~~ 71 (100)
T 2kre_A 21 IDYSDAPDEFRDPLMDTLM---TDPVRLP-SGTIMDRSIILRHLLNSPTDPFNRQ 71 (100)
T ss_dssp CSCSSCSTTTBCTTTCSBC---SSEEEET-TTEEEEHHHHHHHTTSCSBCSSSCC
T ss_pred hhhccCcHhhCCcCccCcc---cCCeECC-CCCEEchHHHHHHHHcCCCCCCCCC
Confidence 3444444477898888875 4555555 777664321 2457888853
No 229
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=22.58 E-value=42 Score=19.74 Aligned_cols=15 Identities=33% Similarity=0.811 Sum_probs=10.1
Q ss_pred CCcceecCCCCceec
Q psy2693 54 GRESEACVYCGASYL 68 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~ 68 (122)
|.....|++||..|.
T Consensus 59 ~~~~~~C~~C~~~f~ 73 (90)
T 1a1h_A 59 GEKPFACDICGRKFA 73 (90)
T ss_dssp CCCCEECTTTCCEES
T ss_pred CCCCccCCCCCchhC
Confidence 555667777777664
No 230
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=22.21 E-value=87 Score=17.31 Aligned_cols=37 Identities=22% Similarity=0.556 Sum_probs=20.5
Q ss_pred ecccceeccCCCcceecCCCCceecCCC------CCcccCccc
Q psy2693 44 CARSYTPIYHGRESEACVYCGASYLPKY------KGELCAVCT 80 (122)
Q Consensus 44 Ca~S~tPIY~G~~~v~CP~CgA~Y~p~~------kG~lC~VC~ 80 (122)
|+.-+.++-.|+..+.-|-||-.|+.+- ....|++|.
T Consensus 8 C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr 50 (55)
T 1iym_A 8 CAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 50 (55)
T ss_dssp CTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSC
T ss_pred CccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCC
Confidence 4444455444555666666776666432 245677774
No 231
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.94 E-value=51 Score=19.15 Aligned_cols=18 Identities=22% Similarity=0.539 Sum_probs=13.3
Q ss_pred ccCCCcceecCCCCceec
Q psy2693 51 IYHGRESEACVYCGASYL 68 (122)
Q Consensus 51 IY~G~~~v~CP~CgA~Y~ 68 (122)
+..|+....|++|+..|.
T Consensus 9 ~H~~~k~~~C~~C~~~f~ 26 (86)
T 1x6h_A 9 THTGEKPYACSHCDKTFR 26 (86)
T ss_dssp TCCCCCCEECSSSSCEES
T ss_pred eecCCCCCcCCCCCCccC
Confidence 345667788999998774
No 232
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=21.71 E-value=44 Score=19.98 Aligned_cols=17 Identities=29% Similarity=0.692 Sum_probs=12.8
Q ss_pred CCCcceecCCCCceecC
Q psy2693 53 HGRESEACVYCGASYLP 69 (122)
Q Consensus 53 ~G~~~v~CP~CgA~Y~p 69 (122)
.|+....|+.||..|..
T Consensus 27 ~~~~~~~C~~C~k~f~~ 43 (88)
T 1llm_C 27 TGEKPFACDICGRKFAR 43 (88)
T ss_dssp HCCCCEECTTTCCEESS
T ss_pred CCCCCccCCCCCCccCC
Confidence 35667889999988753
No 233
>3d00_A Tungsten formylmethanofuran dehydrogenase subunit; FWDE/GAPDH domain-like fold, structural genomics, joint CENT structural genomics; HET: MSE; 1.90A {Syntrophus aciditrophicus}
Probab=21.70 E-value=37 Score=25.46 Aligned_cols=25 Identities=32% Similarity=0.769 Sum_probs=21.1
Q ss_pred CcceecCCCCceecCCCCCcccCccc
Q psy2693 55 RESEACVYCGASYLPKYKGELCAVCT 80 (122)
Q Consensus 55 ~~~v~CP~CgA~Y~p~~kG~lC~VC~ 80 (122)
.+++.|+-||-.+-.. -+.+|.-|.
T Consensus 161 ~~~~~C~~CGE~~~~~-g~~~C~~C~ 185 (191)
T 3d00_A 161 GKIVLCPQCREAYPAQ-DGELCLSCQ 185 (191)
T ss_dssp CCEEECTTTCCEEEGG-GCSSCHHHH
T ss_pred cCCEECCcCCCChhhC-CCcCCcccc
Confidence 5889999999988866 788888884
No 234
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=21.60 E-value=48 Score=23.10 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=21.2
Q ss_pred cceecCCCCceecCCC----CCcccCcccceeec
Q psy2693 56 ESEACVYCGASYLPKY----KGELCAVCTVSVID 85 (122)
Q Consensus 56 ~~v~CP~CgA~Y~p~~----kG~lC~VC~ls~IG 85 (122)
..-.||.||..|+-.| ...+|..|+-..++
T Consensus 126 ~R~~~~~~g~~y~~~~~pp~~~~~~~~~~~~l~~ 159 (216)
T 3fb4_A 126 GRWICKTCGATYHTIFNPPAVEGICDKDGGELYQ 159 (216)
T ss_dssp SEEEETTTCCEEETTTBCCSSTTBCTTTCCBEEC
T ss_pred cCCCCCccCCccccccCCCCcccccccccCcccc
Confidence 3457999999999655 34578888754444
No 235
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.32 E-value=51 Score=16.25 Aligned_cols=16 Identities=19% Similarity=0.546 Sum_probs=11.5
Q ss_pred CCcceecCC--CCceecC
Q psy2693 54 GRESEACVY--CGASYLP 69 (122)
Q Consensus 54 G~~~v~CP~--CgA~Y~p 69 (122)
|+...+|++ ||..|..
T Consensus 3 ~~k~~~C~~~~C~k~f~~ 20 (38)
T 1bhi_A 3 DDKPFLCTAPGCGQRFTN 20 (38)
T ss_dssp TCCCEECCCTTTCCEESS
T ss_pred CCcceECCCCCCCcccCC
Confidence 556678994 9988754
No 236
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.24 E-value=38 Score=21.05 Aligned_cols=17 Identities=24% Similarity=0.460 Sum_probs=13.8
Q ss_pred cCCCcceecCCCCceec
Q psy2693 52 YHGRESEACVYCGASYL 68 (122)
Q Consensus 52 Y~G~~~v~CP~CgA~Y~ 68 (122)
..|.....|++||..|.
T Consensus 19 h~~~~~~~C~~C~k~f~ 35 (98)
T 2gqj_A 19 IHERGEAVCPTCNVVTR 35 (98)
T ss_dssp TTTTSCCCCTTTCCCCS
T ss_pred hccCCCcCCCCCCCChh
Confidence 35677789999999887
No 237
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=20.66 E-value=37 Score=20.81 Aligned_cols=11 Identities=36% Similarity=0.809 Sum_probs=8.7
Q ss_pred ceecCCCCcee
Q psy2693 57 SEACVYCGASY 67 (122)
Q Consensus 57 ~v~CP~CgA~Y 67 (122)
..+|.|||..-
T Consensus 11 ~~~CSFCGk~~ 21 (51)
T 2ds5_A 11 LLYCSFCGKSQ 21 (51)
T ss_dssp CCBCTTTCCBT
T ss_pred CcEecCCCCCH
Confidence 46899999865
No 238
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.57 E-value=40 Score=20.98 Aligned_cols=15 Identities=27% Similarity=0.707 Sum_probs=10.1
Q ss_pred CCcceecCCCCceec
Q psy2693 54 GRESEACVYCGASYL 68 (122)
Q Consensus 54 G~~~v~CP~CgA~Y~ 68 (122)
|+...+|+.|+..|.
T Consensus 4 ~~~~~~C~~C~~~f~ 18 (124)
T 2dlq_A 4 GSSGVECPTCHKKFL 18 (124)
T ss_dssp CCSSCCCTTTCCCCS
T ss_pred CCCCCCCCCCCCcCC
Confidence 556667777777663
No 239
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=20.02 E-value=67 Score=23.39 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCCCCceeecCCCCCCeeeecccceeccC
Q psy2693 16 ARKLLAICNANPTDEHTIDYDEHNPFQICARSYTPIYH 53 (122)
Q Consensus 16 ArKIl~~ce~~~tDa~eIdYD~~npF~ICa~S~tPIY~ 53 (122)
||.+.+.....+. |-||+|++|.+=..-++|+|.
T Consensus 6 ~~~~a~~l~~~ga----i~~~~h~~f~l~sG~~S~~~~ 39 (211)
T 2aee_A 6 ASQIATQLLDIKA----VYLKPEDPFTWASGIKSPIYT 39 (211)
T ss_dssp HHHHHHHHHHTTS----EEECTTSCEECGGGCEESEEE
T ss_pred HHHHHHHHHHCCC----EEECCCCCeEeCCCCcCCeEE
Confidence 5556666665544 889999999998888888875
Done!