Query psy2696
Match_columns 180
No_of_seqs 158 out of 1953
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 22:53:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jm7_B BARD1, BRCA1-associated 99.7 7.3E-17 2.5E-21 109.8 4.6 91 30-127 15-111 (117)
2 1wgm_A Ubiquitin conjugation f 99.6 6.9E-16 2.4E-20 101.6 7.6 84 19-107 4-88 (98)
3 3ztg_A E3 ubiquitin-protein li 99.6 3E-16 1E-20 102.2 5.4 74 31-107 7-82 (92)
4 1t1h_A Gspef-atpub14, armadill 99.6 1.4E-16 4.7E-21 100.7 3.6 72 32-107 3-74 (78)
5 3l11_A E3 ubiquitin-protein li 99.6 7.1E-16 2.4E-20 104.6 5.8 81 24-104 2-85 (115)
6 2egp_A Tripartite motif-contai 99.6 7.8E-17 2.7E-21 102.0 -0.0 57 30-86 5-67 (79)
7 2ysl_A Tripartite motif-contai 99.6 2.3E-15 8E-20 93.7 6.5 64 23-86 6-71 (73)
8 2ecw_A Tripartite motif-contai 99.6 1.6E-16 5.4E-21 101.8 0.7 59 28-86 10-73 (85)
9 2kr4_A Ubiquitin conjugation f 99.6 1.6E-15 5.4E-20 97.4 5.1 73 29-106 6-78 (85)
10 2ecv_A Tripartite motif-contai 99.6 2.3E-16 8E-21 101.0 0.6 61 26-86 8-73 (85)
11 3fl2_A E3 ubiquitin-protein li 99.6 9.5E-16 3.3E-20 105.3 3.5 73 32-107 47-119 (124)
12 2ysj_A Tripartite motif-contai 99.6 3.6E-15 1.2E-19 90.3 4.6 55 24-78 7-63 (63)
13 2kre_A Ubiquitin conjugation f 99.6 7.9E-15 2.7E-19 96.8 6.5 73 31-108 23-95 (100)
14 2ecy_A TNF receptor-associated 99.5 7.8E-15 2.7E-19 89.6 4.9 57 29-85 7-63 (66)
15 3lrq_A E3 ubiquitin-protein li 99.5 1.1E-15 3.7E-20 101.1 0.6 74 31-108 16-90 (100)
16 1z6u_A NP95-like ring finger p 99.5 4.3E-15 1.5E-19 105.2 3.5 71 34-107 75-145 (150)
17 2yur_A Retinoblastoma-binding 99.5 1.3E-14 4.5E-19 90.7 4.6 57 30-86 8-66 (74)
18 2y43_A E3 ubiquitin-protein li 99.5 2.2E-15 7.5E-20 99.4 0.6 72 31-107 16-88 (99)
19 2yu4_A E3 SUMO-protein ligase 99.5 1.2E-14 4.2E-19 94.9 3.5 73 32-108 2-83 (94)
20 2ecj_A Tripartite motif-contai 99.5 4.3E-14 1.5E-18 83.9 5.0 51 28-78 6-58 (58)
21 2djb_A Polycomb group ring fin 99.5 3.9E-14 1.3E-18 88.0 4.9 57 29-86 7-64 (72)
22 1bor_A Transcription factor PM 99.5 3.6E-14 1.2E-18 83.9 4.2 49 35-87 4-52 (56)
23 2csy_A Zinc finger protein 183 99.5 3.2E-14 1.1E-18 90.4 4.1 52 31-83 9-60 (81)
24 2ckl_A Polycomb group ring fin 99.5 1.7E-14 5.9E-19 96.6 2.9 74 32-106 10-84 (108)
25 2ckl_B Ubiquitin ligase protei 99.5 1.2E-14 4.2E-19 104.5 2.2 82 31-118 48-130 (165)
26 2ct2_A Tripartite motif protei 99.4 7.1E-14 2.4E-18 90.0 4.9 57 30-86 8-70 (88)
27 1e4u_A Transcriptional repress 99.4 8.2E-14 2.8E-18 87.8 4.9 57 30-86 4-64 (78)
28 3hct_A TNF receptor-associated 99.4 2.4E-14 8.4E-19 97.4 2.6 71 30-104 11-81 (118)
29 4ayc_A E3 ubiquitin-protein li 99.4 3.1E-14 1.1E-18 99.5 2.3 51 34-85 50-100 (138)
30 2d8t_A Dactylidin, ring finger 99.4 2.5E-13 8.7E-18 84.0 5.3 52 33-85 11-62 (71)
31 1rmd_A RAG1; V(D)J recombinati 99.4 2.8E-14 9.6E-19 96.7 0.8 76 26-104 12-87 (116)
32 2c2l_A CHIP, carboxy terminus 99.4 2.6E-13 9E-18 104.8 5.0 71 33-107 204-274 (281)
33 2f42_A STIP1 homology and U-bo 99.4 2.1E-13 7.2E-18 98.6 4.1 72 32-107 101-172 (179)
34 2ea6_A Ring finger protein 4; 99.4 1.9E-13 6.6E-18 83.8 2.8 53 30-83 8-67 (69)
35 1jm7_A BRCA1, breast cancer ty 99.4 2.6E-13 8.8E-18 91.2 3.5 53 34-86 18-72 (112)
36 1g25_A CDK-activating kinase a 99.3 3E-13 1E-17 82.2 2.5 51 36-86 2-57 (65)
37 3knv_A TNF receptor-associated 99.3 9.1E-14 3.1E-18 97.3 0.1 55 31-85 25-79 (141)
38 2ect_A Ring finger protein 126 99.3 1.9E-12 6.4E-17 81.5 5.2 55 31-86 9-66 (78)
39 3hcs_A TNF receptor-associated 99.3 3.3E-13 1.1E-17 97.4 1.9 71 30-104 11-81 (170)
40 3htk_C E3 SUMO-protein ligase 99.3 2E-12 6.8E-17 98.0 4.5 72 31-106 175-250 (267)
41 3ng2_A RNF4, snurf, ring finge 99.3 4.3E-13 1.5E-17 82.8 0.6 53 33-86 6-65 (71)
42 2ecn_A Ring finger protein 141 99.2 4.1E-12 1.4E-16 78.2 3.4 54 31-86 9-62 (70)
43 2ep4_A Ring finger protein 24; 99.2 5.5E-12 1.9E-16 78.5 3.8 55 30-85 8-65 (74)
44 2ecg_A Baculoviral IAP repeat- 99.2 6E-13 2E-17 83.3 -0.8 59 21-84 9-68 (75)
45 1iym_A EL5; ring-H2 finger, ub 99.2 1.3E-11 4.3E-16 72.3 3.7 49 34-83 2-54 (55)
46 4ic3_A E3 ubiquitin-protein li 99.2 7.4E-13 2.5E-17 82.6 -2.0 48 32-84 19-67 (74)
47 2xeu_A Ring finger protein 4; 99.2 4.4E-12 1.5E-16 76.5 0.9 50 36-86 2-58 (64)
48 2ecm_A Ring finger and CHY zin 99.1 1.4E-11 4.7E-16 72.1 2.4 47 36-83 4-54 (55)
49 1x4j_A Ring finger protein 38; 99.1 2.1E-11 7.1E-16 76.1 3.3 52 33-85 19-73 (75)
50 2l0b_A E3 ubiquitin-protein li 99.1 2.6E-11 9E-16 78.5 3.8 51 33-84 36-89 (91)
51 2kiz_A E3 ubiquitin-protein li 99.1 5.6E-11 1.9E-15 72.8 4.3 53 32-85 9-64 (69)
52 1chc_A Equine herpes virus-1 r 99.1 2.4E-11 8.4E-16 74.2 2.2 48 36-84 4-52 (68)
53 4ap4_A E3 ubiquitin ligase RNF 99.1 3E-11 1E-15 83.2 1.9 51 35-86 5-62 (133)
54 1v87_A Deltex protein 2; ring- 99.0 1.1E-10 3.8E-15 78.5 2.9 50 37-86 25-96 (114)
55 2yho_A E3 ubiquitin-protein li 99.0 1.6E-10 5.3E-15 72.8 1.6 48 33-85 14-62 (79)
56 2ea5_A Cell growth regulator w 99.0 8.2E-10 2.8E-14 67.5 4.8 47 33-84 11-58 (68)
57 2ecl_A Ring-box protein 2; RNF 98.9 2.1E-09 7E-14 68.0 5.0 49 36-85 14-77 (81)
58 2y1n_A E3 ubiquitin-protein li 98.9 6E-10 2E-14 89.3 2.7 52 35-86 330-381 (389)
59 2vje_B MDM4 protein; proto-onc 98.8 1.2E-09 4E-14 65.8 2.1 47 36-83 6-55 (63)
60 2vje_A E3 ubiquitin-protein li 98.8 1.4E-09 4.9E-14 65.6 2.3 48 35-83 6-56 (64)
61 1wim_A KIAA0161 protein; ring 98.8 1E-09 3.4E-14 71.4 1.3 46 36-81 4-61 (94)
62 3t6p_A Baculoviral IAP repeat- 98.7 2.2E-09 7.5E-14 85.3 1.9 48 32-84 290-338 (345)
63 4ap4_A E3 ubiquitin ligase RNF 98.7 1.5E-09 5.2E-14 74.5 0.6 52 34-86 69-127 (133)
64 3dpl_R Ring-box protein 1; ubi 98.6 1.3E-08 4.5E-13 67.4 3.1 48 36-84 36-101 (106)
65 2d8s_A Cellular modulator of i 98.6 6.1E-08 2.1E-12 60.9 5.5 52 35-86 13-72 (80)
66 2bay_A PRE-mRNA splicing facto 98.5 1.8E-08 6.2E-13 60.1 0.5 49 37-86 3-52 (61)
67 4a0k_B E3 ubiquitin-protein li 98.3 9E-08 3.1E-12 64.4 0.5 47 37-84 48-112 (117)
68 2jun_A Midline-1; B-BOX, TRIM, 98.3 7.8E-07 2.7E-11 58.2 4.8 72 36-129 2-78 (101)
69 3vk6_A E3 ubiquitin-protein li 98.3 3.1E-07 1.1E-11 59.2 2.2 46 38-83 2-48 (101)
70 1vyx_A ORF K3, K3RING; zinc-bi 97.9 6.9E-06 2.3E-10 48.5 3.0 50 35-84 4-59 (60)
71 2ct0_A Non-SMC element 1 homol 97.9 6.7E-05 2.3E-09 46.1 7.1 53 33-85 11-65 (74)
72 3k1l_B Fancl; UBC, ring, RWD, 97.2 0.00012 4E-09 57.6 1.6 52 33-84 304-373 (381)
73 3nw0_A Non-structural maintena 95.0 0.017 5.9E-07 43.3 3.3 46 37-82 180-227 (238)
74 2cs3_A Protein C14ORF4, MY039 93.7 0.074 2.5E-06 32.5 3.5 43 35-77 13-63 (93)
75 3m62_A Ubiquitin conjugation f 93.6 0.068 2.3E-06 47.5 4.6 68 33-105 887-955 (968)
76 2ko5_A Ring finger protein Z; 93.1 0.21 7.1E-06 31.6 5.0 52 32-86 23-75 (99)
77 3i2d_A E3 SUMO-protein ligase 91.0 0.15 5.2E-06 40.5 3.2 67 34-104 246-316 (371)
78 1wen_A Inhibitor of growth fam 90.8 0.91 3.1E-05 27.1 5.9 51 32-83 11-67 (71)
79 4fo9_A E3 SUMO-protein ligase 89.4 0.17 5.9E-06 40.0 2.3 68 33-104 211-282 (360)
80 1weu_A Inhibitor of growth fam 89.2 2.6 8.9E-05 26.4 7.3 47 34-82 33-86 (91)
81 1weo_A Cellulose synthase, cat 88.9 0.37 1.3E-05 30.1 3.0 47 37-83 16-69 (93)
82 1fre_A Nuclear factor XNF7; zi 87.3 0.23 8E-06 26.1 1.3 18 112-129 4-21 (42)
83 2yvr_A Transcription intermedi 87.0 0.22 7.4E-06 27.4 1.1 19 111-129 6-25 (50)
84 2ct7_A Ring finger protein 31; 86.7 0.63 2.2E-05 28.8 3.3 32 36-67 24-61 (86)
85 2did_A Tripartite motif protei 85.6 0.26 8.9E-06 27.5 0.9 19 111-129 8-26 (53)
86 1f62_A Transcription factor WS 85.4 0.95 3.3E-05 24.9 3.3 43 39-81 2-50 (51)
87 3ddt_A E3 ubiquitin-protein li 85.2 0.3 1E-05 26.6 1.1 18 112-129 7-25 (48)
88 2d8u_A Ubiquitin ligase TRIM63 84.4 0.32 1.1E-05 28.1 1.0 19 111-129 8-27 (64)
89 1wil_A KIAA1045 protein; ring 84.1 2.5 8.6E-05 26.1 4.9 47 33-80 11-75 (89)
90 1z2q_A LM5-1; membrane protein 83.5 1.7 5.8E-05 26.7 4.1 34 34-67 18-55 (84)
91 2egm_A Tripartite motif-contai 82.7 0.42 1.4E-05 27.2 1.0 18 112-129 19-36 (57)
92 3mjh_B Early endosome antigen 82.0 0.17 6E-06 25.7 -0.7 17 36-52 4-20 (34)
93 2k16_A Transcription initiatio 81.3 1.6 5.4E-05 26.1 3.3 49 34-82 15-69 (75)
94 2csv_A Tripartite motif protei 81.1 0.5 1.7E-05 28.1 0.9 18 112-129 19-36 (72)
95 2jr6_A UPF0434 protein NMA0874 80.8 0.49 1.7E-05 28.1 0.8 41 32-89 3-43 (68)
96 2lri_C Autoimmune regulator; Z 79.9 5.8 0.0002 23.1 5.4 44 37-82 12-60 (66)
97 2jny_A Uncharacterized BCR; st 79.4 0.39 1.3E-05 28.5 0.0 43 30-89 3-45 (67)
98 3vem_A Helicase protein MOM1; 79.3 11 0.00036 24.6 7.8 17 144-160 72-88 (115)
99 2yrg_A Tripartite motif-contai 79.0 0.61 2.1E-05 26.7 0.8 18 112-129 15-32 (59)
100 2js4_A UPF0434 protein BB2007; 77.1 0.65 2.2E-05 27.7 0.6 41 32-89 3-43 (70)
101 1wfp_A Zinc finger (AN1-like) 76.0 6.3 0.00022 23.6 4.7 31 32-62 20-51 (74)
102 1vfy_A Phosphatidylinositol-3- 75.9 1.8 6E-05 25.9 2.3 30 37-66 11-44 (73)
103 1fp0_A KAP-1 corepressor; PHD 75.9 10 0.00034 23.6 5.8 52 33-86 21-77 (88)
104 2ysm_A Myeloid/lymphoid or mix 75.6 5.4 0.00018 25.7 4.8 45 35-79 5-55 (111)
105 3swy_A Cyclic nucleotide-gated 75.5 7.7 0.00026 21.0 6.9 43 131-173 3-45 (46)
106 2hf1_A Tetraacyldisaccharide-1 74.6 0.54 1.8E-05 27.9 -0.3 43 32-91 3-45 (68)
107 1wff_A Riken cDNA 2810002D23 p 74.3 7.7 0.00026 23.9 4.9 29 35-63 23-53 (85)
108 3swf_A CGMP-gated cation chann 74.3 11 0.00039 22.5 8.2 46 131-176 5-50 (74)
109 2dja_A Midline-2; tripartite m 74.3 1.1 3.7E-05 27.4 1.1 18 112-129 19-37 (84)
110 1dvp_A HRS, hepatocyte growth 74.1 3.3 0.00011 30.2 3.9 37 31-67 155-195 (220)
111 2lv9_A Histone-lysine N-methyl 73.8 3.9 0.00013 25.9 3.7 45 35-80 26-75 (98)
112 1mm2_A MI2-beta; PHD, zinc fin 73.2 4.6 0.00016 23.1 3.6 45 34-81 6-56 (61)
113 2jmi_A Protein YNG1, ING1 homo 73.1 1.6 5.3E-05 27.4 1.6 47 34-81 23-76 (90)
114 2yw8_A RUN and FYVE domain-con 73.1 1.9 6.5E-05 26.4 2.0 34 34-67 16-53 (82)
115 1joc_A EEA1, early endosomal a 71.6 1.6 5.6E-05 29.0 1.5 32 36-67 68-103 (125)
116 3zyq_A Hepatocyte growth facto 70.9 3.2 0.00011 30.5 3.1 38 30-67 157-198 (226)
117 2pk7_A Uncharacterized protein 69.8 0.84 2.9E-05 27.2 -0.2 43 32-91 3-45 (69)
118 1x4u_A Zinc finger, FYVE domai 69.3 2.2 7.6E-05 26.1 1.7 34 34-67 11-48 (84)
119 2l5u_A Chromodomain-helicase-D 69.0 5.7 0.00019 22.7 3.3 44 35-80 9-57 (61)
120 1we9_A PHD finger family prote 68.8 2.1 7.2E-05 24.7 1.4 47 35-81 4-58 (64)
121 2jmo_A Parkin; IBR, E3 ligase, 68.5 5 0.00017 24.3 3.2 33 37-69 25-70 (80)
122 2lbm_A Transcriptional regulat 67.7 4.7 0.00016 27.5 3.2 42 36-80 62-116 (142)
123 1wev_A Riken cDNA 1110020M19; 67.2 1.3 4.4E-05 27.6 0.2 50 35-84 14-75 (88)
124 1wfk_A Zinc finger, FYVE domai 67.1 3.2 0.00011 25.8 2.1 32 36-67 8-43 (88)
125 2zet_C Melanophilin; complex, 66.1 1.1 3.7E-05 31.1 -0.3 47 36-82 67-118 (153)
126 2e50_A Protein SET; histone ch 65.9 21 0.0007 26.2 6.6 46 133-178 33-78 (225)
127 2d8v_A Zinc finger FYVE domain 65.7 3.1 0.00011 24.4 1.6 34 33-67 4-38 (67)
128 1y02_A CARP2, FYVE-ring finger 65.4 2.8 9.6E-05 27.7 1.6 45 36-81 18-66 (120)
129 2e6r_A Jumonji/ARID domain-con 64.9 2.7 9.1E-05 26.4 1.4 49 33-81 12-66 (92)
130 2yt5_A Metal-response element- 64.6 1.8 6.2E-05 25.1 0.6 46 36-81 5-61 (66)
131 2l43_A N-teminal domain from h 64.2 5.5 0.00019 24.7 2.8 51 33-83 21-77 (88)
132 3t7l_A Zinc finger FYVE domain 64.2 5.8 0.0002 24.6 2.9 33 35-67 18-54 (90)
133 2gmg_A Hypothetical protein PF 64.0 6.8 0.00023 25.2 3.2 31 49-85 67-97 (105)
134 2kpi_A Uncharacterized protein 63.3 2.5 8.5E-05 23.9 0.9 41 30-89 3-45 (56)
135 1f5n_A Interferon-induced guan 63.1 29 0.00099 29.3 7.8 40 140-179 508-547 (592)
136 1wem_A Death associated transc 63.0 3.3 0.00011 24.7 1.6 46 35-81 14-70 (76)
137 2jrp_A Putative cytoplasmic pr 62.4 1.5 5.1E-05 26.9 -0.1 39 38-82 3-41 (81)
138 1wfl_A Zinc finger protein 216 62.4 20 0.00068 21.4 4.8 27 36-62 24-51 (74)
139 1wd2_A Ariadne-1 protein homol 62.2 2.2 7.5E-05 24.5 0.6 31 38-68 7-45 (60)
140 2jne_A Hypothetical protein YF 62.0 1.3 4.6E-05 28.0 -0.4 41 37-83 32-72 (101)
141 3lqh_A Histone-lysine N-methyl 61.5 3.2 0.00011 29.6 1.5 45 38-82 3-64 (183)
142 2yql_A PHD finger protein 21A; 61.4 2.7 9.3E-05 23.5 0.9 44 34-79 6-54 (56)
143 4g9i_A Hydrogenase maturation 60.2 7.2 0.00025 34.1 3.7 73 35-108 104-214 (772)
144 3asl_A E3 ubiquitin-protein li 60.0 6.7 0.00023 23.1 2.5 42 39-80 20-68 (70)
145 2ku3_A Bromodomain-containing 59.7 6.6 0.00022 23.3 2.4 48 33-80 12-65 (71)
146 1z60_A TFIIH basal transcripti 58.2 11 0.00038 21.5 3.1 39 39-78 17-58 (59)
147 3u5n_A E3 ubiquitin-protein li 57.7 5.5 0.00019 28.7 2.2 46 35-83 5-56 (207)
148 3o36_A Transcription intermedi 55.3 11 0.00037 26.5 3.4 45 37-83 4-53 (184)
149 2e6s_A E3 ubiquitin-protein li 52.8 8.8 0.0003 23.1 2.2 42 39-80 28-76 (77)
150 3v43_A Histone acetyltransfera 51.9 12 0.0004 24.1 2.9 26 55-80 83-111 (112)
151 3ask_A E3 ubiquitin-protein li 51.4 34 0.0012 25.1 5.5 43 38-80 175-224 (226)
152 2ee8_A Protein ODD-skipped-rel 51.1 21 0.00073 21.6 4.0 17 34-50 14-30 (106)
153 3mpx_A FYVE, rhogef and PH dom 50.9 3.2 0.00011 33.2 0.0 34 34-67 372-409 (434)
154 3ql9_A Transcriptional regulat 50.5 12 0.00042 25.0 2.8 45 36-80 56-110 (129)
155 3ghg_B Fibrinogen beta chain; 50.1 1E+02 0.0035 25.1 8.6 20 110-129 61-81 (461)
156 3fs3_A Nucleosome assembly pro 49.7 73 0.0025 25.1 7.5 44 133-176 56-99 (359)
157 1wep_A PHF8; structural genomi 49.2 40 0.0014 20.0 5.2 47 35-82 10-64 (79)
158 3o70_A PHD finger protein 13; 48.6 5.5 0.00019 23.4 0.8 47 33-80 15-66 (68)
159 1wg2_A Zinc finger (AN1-like) 48.1 26 0.00089 20.3 3.6 26 37-62 15-41 (64)
160 2fiy_A Protein FDHE homolog; F 47.9 6.2 0.00021 30.5 1.2 46 35-81 180-231 (309)
161 2ro1_A Transcription intermedi 47.4 13 0.00043 26.5 2.7 42 39-83 4-51 (189)
162 1x64_A Alpha-actinin-2 associa 47.0 44 0.0015 20.0 5.7 42 33-83 21-62 (89)
163 3c6w_A P28ING5, inhibitor of g 44.7 5.6 0.00019 22.6 0.3 45 35-80 7-57 (59)
164 2puy_A PHD finger protein 21A; 44.7 9.5 0.00032 21.5 1.4 44 36-81 4-52 (60)
165 3vhs_A ATPase wrnip1; zinc fin 43.5 6.9 0.00024 18.2 0.5 15 72-86 6-20 (29)
166 3vth_A Hydrogenase maturation 43.3 14 0.00046 32.4 2.7 71 35-108 109-216 (761)
167 1wew_A DNA-binding family prot 43.2 21 0.00073 21.2 2.9 46 35-81 14-72 (78)
168 1zbd_B Rabphilin-3A; G protein 43.0 8.3 0.00028 25.9 1.1 46 36-81 54-107 (134)
169 1xwh_A Autoimmune regulator; P 42.3 10 0.00034 21.9 1.2 44 36-81 7-55 (66)
170 3ghg_C Fibrinogen gamma chain; 41.8 55 0.0019 26.3 5.8 18 112-129 6-24 (411)
171 2vnf_A ING 4, P29ING4, inhibit 41.8 6.2 0.00021 22.5 0.2 45 35-80 8-58 (60)
172 1x4w_A Hypothetical protein FL 41.6 21 0.00071 20.9 2.5 26 37-62 15-44 (67)
173 3shb_A E3 ubiquitin-protein li 40.1 16 0.00054 22.0 1.9 42 39-80 28-76 (77)
174 2dar_A PDZ and LIM domain prot 39.4 34 0.0012 20.6 3.5 38 37-83 25-62 (90)
175 2o35_A Hypothetical protein DU 38.8 6.9 0.00024 24.8 0.1 10 58-67 42-51 (105)
176 3fyb_A Protein of unknown func 38.7 7 0.00024 24.8 0.1 10 58-67 41-50 (104)
177 3swf_A CGMP-gated cation chann 38.3 63 0.0022 19.2 6.6 44 131-174 12-55 (74)
178 3mq7_A Bone marrow stromal ant 37.8 83 0.0028 20.5 7.7 36 135-170 55-90 (121)
179 6rxn_A Rubredoxin; electron tr 37.6 19 0.00066 19.3 1.8 35 37-81 4-39 (46)
180 1x62_A C-terminal LIM domain p 37.6 49 0.0017 19.2 4.0 40 35-83 13-52 (79)
181 3a1b_A DNA (cytosine-5)-methyl 37.2 24 0.00081 24.4 2.7 28 54-81 98-134 (159)
182 3ttc_A HYPF, transcriptional r 36.9 10 0.00035 32.5 1.0 48 59-108 69-125 (657)
183 2pv0_B DNA (cytosine-5)-methyl 36.7 26 0.0009 27.9 3.2 28 54-81 112-148 (386)
184 1gmj_A ATPase inhibitor; coile 36.1 74 0.0025 19.4 7.0 33 140-172 40-72 (84)
185 2g6q_A Inhibitor of growth pro 35.7 9.3 0.00032 21.9 0.4 44 35-80 9-59 (62)
186 2ebt_A Krueppel-like factor 5; 35.7 68 0.0023 18.9 4.6 17 35-51 13-31 (100)
187 4ayb_P DNA-directed RNA polyme 35.4 15 0.00051 19.9 1.1 30 53-85 7-36 (48)
188 2xqn_T Testin, TESS; metal-bin 35.0 26 0.00088 22.6 2.5 46 36-84 29-75 (126)
189 1wfh_A Zinc finger (AN1-like) 34.2 56 0.0019 18.9 3.5 26 37-62 15-41 (64)
190 2ayu_A Nucleosome assembly pro 34.2 1.6E+02 0.0053 23.7 7.4 43 133-175 97-139 (417)
191 2akf_A Coronin-1A; coiled coil 33.3 44 0.0015 15.9 4.6 22 150-171 5-26 (32)
192 2ri7_A Nucleosome-remodeling f 33.1 9.6 0.00033 26.5 0.1 48 35-83 6-61 (174)
193 1vd4_A Transcription initiatio 33.0 8 0.00027 21.5 -0.3 41 36-86 13-53 (62)
194 3oja_A Leucine-rich immune mol 32.7 1.8E+02 0.0062 23.3 7.8 25 152-176 450-474 (487)
195 2cr8_A MDM4 protein; ZF-ranbp 31.7 21 0.00072 19.6 1.3 18 111-128 14-31 (53)
196 3vem_A Helicase protein MOM1; 30.3 1.1E+02 0.0039 19.8 8.0 30 139-168 56-85 (115)
197 1use_A VAsp, vasodilator-stimu 29.7 68 0.0023 17.1 3.7 19 142-160 17-35 (45)
198 1erd_A Pheromone ER-2; NMR {Eu 28.6 15 0.00051 18.3 0.4 14 53-66 10-23 (40)
199 1loi_A Cyclic 3',5'-AMP specif 28.2 8.5 0.00029 17.4 -0.5 8 122-129 5-12 (26)
200 2e72_A POGO transposable eleme 27.7 36 0.0012 18.5 1.8 17 68-84 8-24 (49)
201 1m1j_B Fibrinogen beta chain; 27.5 2.5E+02 0.0086 22.9 8.9 18 112-129 68-86 (464)
202 3d00_A Tungsten formylmethanof 27.5 17 0.00058 25.9 0.6 27 35-66 161-187 (191)
203 1fxk_C Protein (prefoldin); ar 27.5 1.3E+02 0.0044 19.5 6.8 26 130-155 85-110 (133)
204 2cup_A Skeletal muscle LIM-pro 27.4 47 0.0016 20.3 2.7 45 36-83 32-77 (101)
205 2jvx_A NF-kappa-B essential mo 27.4 9.5 0.00033 18.3 -0.5 15 38-52 4-18 (28)
206 2c6a_A Ubiquitin-protein ligas 27.1 28 0.00094 18.7 1.3 18 111-128 16-33 (46)
207 3vp9_A General transcriptional 27.0 1.2E+02 0.004 18.9 4.7 27 141-167 58-84 (92)
208 3iv1_A Tumor susceptibility ge 26.9 1.1E+02 0.0037 18.4 5.6 28 140-167 42-69 (78)
209 3ci9_A Heat shock factor-bindi 25.1 89 0.003 16.9 5.0 36 136-171 9-44 (48)
210 2eqe_A Tumor necrosis factor, 24.8 40 0.0014 18.0 1.6 16 35-50 30-45 (48)
211 1wig_A KIAA1808 protein; LIM d 24.7 37 0.0013 19.6 1.7 32 36-67 30-63 (73)
212 2jtn_A LIM domain-binding prot 24.5 59 0.002 22.5 3.0 24 57-83 107-130 (182)
213 3lf9_A 4E10_D0_1IS1A_001_C (T1 24.4 1.4E+02 0.0047 19.6 4.4 32 148-179 83-115 (121)
214 2kwj_A Zinc finger protein DPF 24.3 16 0.00055 23.5 0.0 11 55-65 79-89 (114)
215 1x4v_A Hypothetical protein LO 24.2 1E+02 0.0035 17.6 3.5 26 37-62 12-40 (63)
216 3c5k_A HD6, histone deacetylas 24.0 21 0.0007 23.0 0.5 27 37-63 24-50 (109)
217 1e8j_A Rubredoxin; iron-sulfur 23.9 79 0.0027 17.2 2.9 15 31-45 30-44 (52)
218 2i13_A AART; DNA binding, zinc 23.9 20 0.0007 24.5 0.5 13 37-49 21-33 (190)
219 1f5n_A Interferon-induced guan 23.6 3.3E+02 0.011 22.9 8.0 24 140-163 526-549 (592)
220 2ffw_A Midline-1; B-BOX, ring 23.5 51 0.0018 19.5 2.2 31 36-66 29-62 (78)
221 1gk4_A Vimentin; intermediate 23.1 1.3E+02 0.0044 18.0 8.3 27 140-166 15-41 (84)
222 2l4z_A DNA endonuclease RBBP8, 23.1 1E+02 0.0034 19.9 3.8 39 36-83 60-99 (123)
223 2rsd_A E3 SUMO-protein ligase 22.9 11 0.00038 21.9 -0.9 44 36-80 9-64 (68)
224 2rgt_A Fusion of LIM/homeobox 22.7 58 0.002 22.2 2.7 46 35-83 31-76 (169)
225 2m0d_A Zinc finger and BTB dom 22.1 18 0.0006 15.6 -0.1 13 38-50 4-16 (30)
226 1znf_A 31ST zinc finger from X 22.1 22 0.00074 15.0 0.2 12 39-50 3-14 (27)
227 2lvr_A Zinc finger and BTB dom 27.6 19 0.00065 15.6 0.0 10 39-48 5-14 (30)
228 2lvu_A Zinc finger and BTB dom 27.5 19 0.00065 15.1 0.0 11 39-49 4-14 (26)
229 2kvh_A Zinc finger and BTB dom 21.7 18 0.00061 15.4 -0.1 12 38-49 4-15 (27)
230 1p7a_A BF3, BKLF, kruppel-like 21.7 25 0.00085 16.4 0.4 14 37-50 11-24 (37)
231 2kgg_A Histone demethylase jar 21.7 35 0.0012 18.4 1.1 42 38-79 3-52 (52)
232 2elr_A Zinc finger protein 406 21.6 27 0.00091 16.1 0.5 16 36-51 8-23 (36)
233 1ard_A Yeast transcription fac 21.4 22 0.00075 15.2 0.2 12 38-49 3-14 (29)
234 2m0e_A Zinc finger and BTB dom 21.3 26 0.00088 14.8 0.4 12 38-49 3-14 (29)
235 1wee_A PHD finger family prote 21.3 53 0.0018 19.0 1.9 46 34-80 13-65 (72)
236 3h0g_L DNA-directed RNA polyme 20.8 37 0.0013 19.5 1.1 16 70-85 36-51 (63)
237 2lvt_A Zinc finger and BTB dom 26.0 21 0.00072 15.4 0.0 12 38-49 3-14 (29)
238 1dl6_A Transcription factor II 20.4 88 0.003 17.4 2.7 14 32-45 6-19 (58)
No 1
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.65 E-value=7.3e-17 Score=109.82 Aligned_cols=91 Identities=19% Similarity=0.433 Sum_probs=62.7
Q ss_pred CCCCCCCccccccccccCCCceec-cccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcCC
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEPCLL-SCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAEN 108 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P~~l-~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~~ 108 (180)
....+.+.+.|+||++.|.+|+++ +|||+||..||..|+. ..||.|+..+.... +..|..+..+++.+....
T Consensus 15 ~~~~l~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~---~~CP~Cr~~~~~~~----~~~n~~l~~l~~~~~~~~ 87 (117)
T 1jm7_B 15 ALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG---TGCPVCYTPAWIQD----LKINRQLDSMIQLCSKLR 87 (117)
T ss_dssp HHHHHHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT---TBCSSSCCBCSCSS----CCCCHHHHHHHHHHHHHH
T ss_pred HHHhchhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc---CCCcCCCCcCcccc----ccccHHHHHHHHHHHHHH
Confidence 345667899999999999999999 9999999999999865 67999999986655 788998888877654321
Q ss_pred -----CCCCCcCcccccccccccC
Q psy2696 109 -----PPCANCDKRDRNAMYFCST 127 (180)
Q Consensus 109 -----~~c~~C~~h~~~~~~~C~~ 127 (180)
.....|..|.+.+.+||.+
T Consensus 88 ~~~~~~~~~~c~~h~~~~~lfc~~ 111 (117)
T 1jm7_B 88 NLLHDNELSDLKEDKPRKSLFNDA 111 (117)
T ss_dssp HHHHCCCCCC--------------
T ss_pred HHHhhccccccccccccCccceec
Confidence 2357899998889999974
No 2
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.63 E-value=6.9e-16 Score=101.58 Aligned_cols=84 Identities=14% Similarity=0.162 Sum_probs=70.0
Q ss_pred CCCCCCCCCCCCCCCCCCccccccccccCCCceecccc-ccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHH
Q psy2696 19 GPPEGEEAPTPTSCGPKNPLLCHVCDDYYTEPCLLSCY-HSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVL 97 (180)
Q Consensus 19 ~~~~~~~~~~~~~~~l~~~l~C~iC~~~~~~P~~l~C~-H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l 97 (180)
+.....++.......+.+++.||||+++|.+|++++|| |+||..||..|+.. ...||.|+..+...+ +.+|..+
T Consensus 4 ~~~~~~~~~~~~~~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-~~~cP~~~~~l~~~~----L~pn~~L 78 (98)
T 1wgm_A 4 GSSGLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-DQTDPFNRSPLTMDQ----IRPNTEL 78 (98)
T ss_dssp SSCCSCCSCCCCCCSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-SCBCTTTCSBCCTTT----SEECHHH
T ss_pred ccccccccchhhhhcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-CCCCCCCCCCCChhh----ceEcHHH
Confidence 34455566666667788899999999999999999999 99999999999765 468999999987766 8899999
Q ss_pred HHHHHHHhcC
Q psy2696 98 KQLIEVANAE 107 (180)
Q Consensus 98 ~~l~~~~~~~ 107 (180)
.++++.+...
T Consensus 79 k~~I~~~~~~ 88 (98)
T 1wgm_A 79 KEKIQRWLAE 88 (98)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988887543
No 3
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.63 E-value=3e-16 Score=102.21 Aligned_cols=74 Identities=24% Similarity=0.592 Sum_probs=61.4
Q ss_pred CCCCCCccccccccccCCCceecc-ccccchHHhhhcccc-CCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcC
Q psy2696 31 SCGPKNPLLCHVCDDYYTEPCLLS-CYHSFCARCLRGRTV-DGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAE 107 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P~~l~-C~H~fC~~Cl~~~~~-~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~ 107 (180)
.+.+.+.+.|+||++.|.+|++++ |||+||..||..|+. .+...||.||..+.... .+.+|..+.++++.+...
T Consensus 7 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~---~~~~n~~l~~~i~~~~~~ 82 (92)
T 3ztg_A 7 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPD---ALIANKFLRQAVNNFKNE 82 (92)
T ss_dssp CCCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTT---SCEECHHHHHHHHHHHHH
T ss_pred cccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCcc---ccCcCHHHHHHHHHHHHH
Confidence 456788999999999999999999 999999999999864 34578999999863322 377899999998887653
No 4
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.63 E-value=1.4e-16 Score=100.71 Aligned_cols=72 Identities=18% Similarity=0.282 Sum_probs=61.5
Q ss_pred CCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcC
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAE 107 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~ 107 (180)
..+.+.+.|+||++.|.+|++++|||+||..||.+|...+...||.|+..+.... +.+|..+.++++.+...
T Consensus 3 ~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~----l~~n~~l~~~i~~~~~~ 74 (78)
T 1t1h_A 3 PEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAG----LTPNYVLKSLIALWCES 74 (78)
T ss_dssp CCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCC----CEECTTTHHHHHHHHHH
T ss_pred cCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhh----CccCHHHHHHHHHHHHH
Confidence 3567789999999999999999999999999999997766788999999887665 67788888888776543
No 5
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.61 E-value=7.1e-16 Score=104.55 Aligned_cols=81 Identities=20% Similarity=0.412 Sum_probs=62.7
Q ss_pred CCCCCCCCCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccC---CCCCCCCChHHHHHH
Q psy2696 24 EEAPTPTSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK---EGSTLPPPDNVLKQL 100 (180)
Q Consensus 24 ~~~~~~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~---~~~~~l~~n~~l~~l 100 (180)
.|+.+.....+.+.+.|+||++.|.+|+.++|||+||..|+..|+..+...||.||..+... .....+..|..+..+
T Consensus 2 sm~~~~~~~~~~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~n~~l~~~ 81 (115)
T 3l11_A 2 SMALPKDAIPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNVELWTI 81 (115)
T ss_dssp CCCCCTTCCCCHHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHHHHHHHHHTTCCBCHHHHHH
T ss_pred CCcccccccCCCCCCCCccCCcccCceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCccccccccccchhhHHHHHH
Confidence 45555566778889999999999999999999999999999999877678999999988641 011125566666666
Q ss_pred HHHH
Q psy2696 101 IEVA 104 (180)
Q Consensus 101 ~~~~ 104 (180)
+..+
T Consensus 82 i~~~ 85 (115)
T 3l11_A 82 IQKH 85 (115)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 6
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.59 E-value=7.8e-17 Score=102.00 Aligned_cols=57 Identities=33% Similarity=0.753 Sum_probs=49.7
Q ss_pred CCCCCCCccccccccccCCCceeccccccchHHhhhccccC------CccCCCCCCCCcccCC
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVD------GKLSCPICGQHTLLKE 86 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~------~~~~CP~Cr~~~~~~~ 86 (180)
..+.+.+.+.|+||++.|.+|+.++|||+||..|+..|+.. ....||.||..+...+
T Consensus 5 ~~~~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 67 (79)
T 2egp_A 5 SSGNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEH 67 (79)
T ss_dssp SSCCCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSG
T ss_pred hHhhcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhh
Confidence 45677889999999999999999999999999999998654 3788999999987654
No 7
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=2.3e-15 Score=93.71 Aligned_cols=64 Identities=22% Similarity=0.552 Sum_probs=54.6
Q ss_pred CCCCCCCCCCCCCCccccccccccCCCceeccccccchHHhhhcccc--CCccCCCCCCCCcccCC
Q psy2696 23 GEEAPTPTSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTV--DGKLSCPICGQHTLLKE 86 (180)
Q Consensus 23 ~~~~~~~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~--~~~~~CP~Cr~~~~~~~ 86 (180)
+.|++......+.+.+.|+||++.|.+|+.++|||+||..|+..|.. .....||.||..+...+
T Consensus 6 ~~~~~~~~~~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 71 (73)
T 2ysl_A 6 SGMASGQFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNA 71 (73)
T ss_dssp CCCCCCCCCCCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCC
T ss_pred cccccHHHHHhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCccc
Confidence 34666667788899999999999999999999999999999999865 35678999999876554
No 8
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.58 E-value=1.6e-16 Score=101.80 Aligned_cols=59 Identities=27% Similarity=0.584 Sum_probs=50.6
Q ss_pred CCCCCCCCCccccccccccCCCceeccccccchHHhhhccccC-----CccCCCCCCCCcccCC
Q psy2696 28 TPTSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVD-----GKLSCPICGQHTLLKE 86 (180)
Q Consensus 28 ~~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~-----~~~~CP~Cr~~~~~~~ 86 (180)
+...+.+.+.+.|+||++.|.+|+.++|||+||..|+..|+.. ....||.|+..+....
T Consensus 10 ~~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecw_A 10 SSVLEMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGN 73 (85)
T ss_dssp CCCCCCCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTC
T ss_pred HHHHHhCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHh
Confidence 3455678889999999999999999999999999999998543 3789999999887655
No 9
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.58 E-value=1.6e-15 Score=97.40 Aligned_cols=73 Identities=14% Similarity=0.043 Sum_probs=62.4
Q ss_pred CCCCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhc
Q psy2696 29 PTSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANA 106 (180)
Q Consensus 29 ~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~ 106 (180)
.....+.+.+.||||+++|.+|++++|||+||..||..|+.+ ...||.|+..+...+ +.+|..+.++++.+..
T Consensus 6 ~~~~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-~~~cP~~~~~l~~~~----l~pn~~L~~~i~~~~~ 78 (85)
T 2kr4_A 6 IDYSDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-SPTDPFNRQMLTESM----LEPVPELKEQIQAWMR 78 (85)
T ss_dssp CCCTTCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-CSBCTTTCCBCCGGG----CEECHHHHHHHHHHHH
T ss_pred hhhhcCchheECcccCchhcCCeECCCCCEECHHHHHHHHhc-CCCCCCCcCCCChHh----cchHHHHHHHHHHHHH
Confidence 344567789999999999999999999999999999999764 468999999887766 8889999888877643
No 10
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=2.3e-16 Score=100.99 Aligned_cols=61 Identities=30% Similarity=0.649 Sum_probs=51.6
Q ss_pred CCCCCCCCCCCccccccccccCCCceeccccccchHHhhhccccC-----CccCCCCCCCCcccCC
Q psy2696 26 APTPTSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVD-----GKLSCPICGQHTLLKE 86 (180)
Q Consensus 26 ~~~~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~-----~~~~CP~Cr~~~~~~~ 86 (180)
.++.....+.+.+.|+||.+.|.+|+.++|||+||..|+..|+.. +...||.|+..+...+
T Consensus 8 ~~~~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecv_A 8 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 73 (85)
T ss_dssp CCCCCCCCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSS
T ss_pred chHHHHHHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHh
Confidence 334456778889999999999999999999999999999998432 4788999999987665
No 11
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.57 E-value=9.5e-16 Score=105.27 Aligned_cols=73 Identities=18% Similarity=0.367 Sum_probs=62.1
Q ss_pred CCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcC
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAE 107 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~ 107 (180)
..+.+.+.|+||++.|.+|++++|||+||..||..|+......||.||..+.... .+.+|..+..+++.+-..
T Consensus 47 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~---~~~~n~~l~~~i~~~~p~ 119 (124)
T 3fl2_A 47 SKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSY---AMQVNQPLQTVLNQLFPG 119 (124)
T ss_dssp HHHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTC---CCCCCHHHHHHHHHHSTT
T ss_pred HhCccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCCCC---CCCCCHHHHHHHHHHccc
Confidence 3456788999999999999999999999999999998767778999999987632 378899999998877543
No 12
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=3.6e-15 Score=90.25 Aligned_cols=55 Identities=25% Similarity=0.688 Sum_probs=47.7
Q ss_pred CCCCCCCCCCCCCccccccccccCCCceeccccccchHHhhhccccC--CccCCCCC
Q psy2696 24 EEAPTPTSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVD--GKLSCPIC 78 (180)
Q Consensus 24 ~~~~~~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~--~~~~CP~C 78 (180)
.|++....+.+.+.+.|+||++.|.+|+.++|||+||..||.+|... ....||.|
T Consensus 7 ~~~~~~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 7 GMASGQFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp SCCCCCCCCCCCCCCBCTTTCSBCSSCEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccchHHHHHhCccCCCCCcCCchhCCeEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 45556667888999999999999999999999999999999999642 56789987
No 13
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.55 E-value=7.9e-15 Score=96.84 Aligned_cols=73 Identities=15% Similarity=0.076 Sum_probs=63.5
Q ss_pred CCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcCC
Q psy2696 31 SCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAEN 108 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~~ 108 (180)
...+.+.+.||||+++|.+|++++|||+||..||..|+.. ...||.|+..+...+ +.+|..+.++++.+....
T Consensus 23 ~~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-~~~cP~~~~~l~~~~----L~pn~~Lk~~I~~~~~~~ 95 (100)
T 2kre_A 23 YSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-SPTDPFNRQTLTESM----LEPVPELKEQIQAWMREK 95 (100)
T ss_dssp CSSCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-CSBCSSSCCBCCTTS----SEECHHHHHHHHHHHHTT
T ss_pred hccCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-CCCCCCCCCCCChhh----ceECHHHHHHHHHHHHHh
Confidence 4566789999999999999999999999999999999764 568999999987766 889999999988876543
No 14
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=7.8e-15 Score=89.63 Aligned_cols=57 Identities=18% Similarity=0.419 Sum_probs=49.7
Q ss_pred CCCCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 29 PTSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 29 ~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
.....+.+.+.|+||++.+.+|+.++|||+||..|+.+|.......||.|+..+...
T Consensus 7 ~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 7 GFVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp CSCCSCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred hhhhcCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 445667889999999999999999999999999999999766677899999987654
No 15
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.52 E-value=1.1e-15 Score=101.14 Aligned_cols=74 Identities=16% Similarity=0.354 Sum_probs=60.8
Q ss_pred CCCCCCccccccccccCCCcee-ccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcCC
Q psy2696 31 SCGPKNPLLCHVCDDYYTEPCL-LSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAEN 108 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P~~-l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~~ 108 (180)
...+.+.+.|+||++.|.+|+. ++|||+||..||..|+......||.||..+.... +..+..+..+++.+....
T Consensus 16 ~~~l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~----l~~~~~~~~i~~~~~~l~ 90 (100)
T 3lrq_A 16 VESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRE----LVNCRWAEEVTQQLDTLQ 90 (100)
T ss_dssp HHHHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG----CEECTTHHHHHHHHHHHC
T ss_pred cccCCCCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHH----hHhhHHHHHHHHHHHHHH
Confidence 3456788999999999999999 9999999999999997655578999999987766 666777777776665543
No 16
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.52 E-value=4.3e-15 Score=105.21 Aligned_cols=71 Identities=21% Similarity=0.585 Sum_probs=61.7
Q ss_pred CCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcC
Q psy2696 34 PKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAE 107 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~ 107 (180)
+.+.+.|+||++.|.+|++++|||+||..||..|+......||.||..+.... .+..|..+..+++.+...
T Consensus 75 l~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~---~l~~n~~l~~lv~~~~p~ 145 (150)
T 1z6u_A 75 LEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQNY---IMIPNEILQTLLDLFFPG 145 (150)
T ss_dssp HHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTC---CCCBCHHHHHHHHHHSTT
T ss_pred CccCCEeecCChhhcCCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCCC---CCCCCHHHHHHHHHHhhH
Confidence 34678999999999999999999999999999997777778999999987763 388999999999887643
No 17
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.51 E-value=1.3e-14 Score=90.65 Aligned_cols=57 Identities=26% Similarity=0.727 Sum_probs=48.3
Q ss_pred CCCCCCCccccccccccCCCceecc-ccccchHHhhhccccC-CccCCCCCCCCcccCC
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEPCLLS-CYHSFCARCLRGRTVD-GKLSCPICGQHTLLKE 86 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P~~l~-C~H~fC~~Cl~~~~~~-~~~~CP~Cr~~~~~~~ 86 (180)
....+.+.+.|+||++.|.+|+.++ |||+||..||..|+.. +...||.||......+
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 8 EDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPD 66 (74)
T ss_dssp CCCCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTT
T ss_pred ccccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcc
Confidence 3567788999999999999999999 9999999999999643 4578999999765444
No 18
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.50 E-value=2.2e-15 Score=99.42 Aligned_cols=72 Identities=22% Similarity=0.540 Sum_probs=60.7
Q ss_pred CCCCCCccccccccccCCCceec-cccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcC
Q psy2696 31 SCGPKNPLLCHVCDDYYTEPCLL-SCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAE 107 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P~~l-~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~ 107 (180)
.+.+.+.+.|+||++.|.+|+.+ +|||+||..|+..|... ...||.|+..+.... +..|..+.++++.+...
T Consensus 16 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~~~----l~~n~~l~~~i~~~~~~ 88 (99)
T 2y43_A 16 MKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPD----LKNNRILDELVKSLNFA 88 (99)
T ss_dssp GHHHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT-CCBCTTTCCBCCGGG----CEECHHHHHHHHHHHHH
T ss_pred HHhCCCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHC-CCCCCCCCCcCChhh----CCcCHHHHHHHHHHHHH
Confidence 34567789999999999999988 89999999999998653 468999999987765 77899999988877543
No 19
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=1.2e-14 Score=94.94 Aligned_cols=73 Identities=18% Similarity=0.337 Sum_probs=60.8
Q ss_pred CCCCCccccccccccCCCceecc-ccccchHHhhhccccC-----CccCCCC--CCCC-cccCCCCCCCCChHHHHHHHH
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLS-CYHSFCARCLRGRTVD-----GKLSCPI--CGQH-TLLKEGSTLPPPDNVLKQLIE 102 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~-C~H~fC~~Cl~~~~~~-----~~~~CP~--Cr~~-~~~~~~~~~l~~n~~l~~l~~ 102 (180)
....+.+.||||+++|.+|++++ |||+||..||..|+.. +...||. |+.. +...+ +.+|..+..+++
T Consensus 2 ~~~~~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~----L~pn~~L~~~I~ 77 (94)
T 2yu4_A 2 SSGSSGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSD----LIQDEALRRAIE 77 (94)
T ss_dssp CSCSSCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGG----EEECHHHHHHHH
T ss_pred CCCCcEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhh----CcCCHHHHHHHH
Confidence 34567899999999999999996 9999999999999643 3578999 8876 66665 788999999998
Q ss_pred HHhcCC
Q psy2696 103 VANAEN 108 (180)
Q Consensus 103 ~~~~~~ 108 (180)
.+....
T Consensus 78 ~~~~~~ 83 (94)
T 2yu4_A 78 NHNKKR 83 (94)
T ss_dssp HHHTTC
T ss_pred HHHHHh
Confidence 886543
No 20
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=4.3e-14 Score=83.94 Aligned_cols=51 Identities=29% Similarity=0.765 Sum_probs=43.8
Q ss_pred CCCCCCCCCccccccccccCCCceeccccccchHHhhhccccC--CccCCCCC
Q psy2696 28 TPTSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVD--GKLSCPIC 78 (180)
Q Consensus 28 ~~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~--~~~~CP~C 78 (180)
+...+.+.+.+.|+||++.+.+|+.++|||+||..||.+|... ....||.|
T Consensus 6 ~~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 6 SGALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp SSCSSCSCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred hhHhhccccCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3445677788999999999999999999999999999998543 66789987
No 21
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=3.9e-14 Score=87.98 Aligned_cols=57 Identities=21% Similarity=0.571 Sum_probs=48.7
Q ss_pred CCCCCCCCccccccccccCCCceec-cccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 29 PTSCGPKNPLLCHVCDDYYTEPCLL-SCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 29 ~~~~~l~~~l~C~iC~~~~~~P~~l-~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
...+.+.+.+.|+||++.|.+|+.+ +|||+||..||..|... ...||.||..+...+
T Consensus 7 ~~~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 7 GNLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 64 (72)
T ss_dssp CCCCCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH-CSSCTTTCCCCCSSC
T ss_pred hhHhhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc-CCcCCCcCcccCccc
Confidence 3456778899999999999999987 99999999999998643 468999999887665
No 22
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.47 E-value=3.6e-14 Score=83.86 Aligned_cols=49 Identities=33% Similarity=0.710 Sum_probs=43.3
Q ss_pred CCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEG 87 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~ 87 (180)
.+.+.|+||++.|.+|+.++|||+||..|+..+ ...||.||..+..+.+
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~----~~~CP~Cr~~~~~~~~ 52 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEAS----GMQCPICQAPWPLGAD 52 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSS----SSSCSSCCSSSSCCSS
T ss_pred ccCCCceEeCCccCCeEEcCCCCcccHHHHccC----CCCCCcCCcEeecCCc
Confidence 567899999999999999999999999999873 4579999999887763
No 23
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3.2e-14 Score=90.40 Aligned_cols=52 Identities=29% Similarity=0.635 Sum_probs=45.1
Q ss_pred CCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 31 SCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
.+...+.+.|+||++.|.+|++++|||+||..|+..|... ...||.|+..+.
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~ 60 (81)
T 2csy_A 9 SEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRA-TPRCYICDQPTG 60 (81)
T ss_dssp SSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHH-CSBCSSSCCBCC
T ss_pred cccCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHC-CCcCCCcCcccc
Confidence 3456678999999999999999999999999999998643 557999999886
No 24
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.46 E-value=1.7e-14 Score=96.58 Aligned_cols=74 Identities=22% Similarity=0.505 Sum_probs=59.6
Q ss_pred CCCCCccccccccccCCCceec-cccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhc
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLL-SCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANA 106 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l-~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~ 106 (180)
..+.+.+.|+||.+.|.+|+.+ +|||+||..|+..|.... ..||.|+..+........+..|..+.++++.+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~-~~CP~Cr~~~~~~~~~~~l~~n~~l~~~i~~~~~ 84 (108)
T 2ckl_A 10 TELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETS-KYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVP 84 (108)
T ss_dssp HHHGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSC-SBCTTTCCBSCSSCGGGGEEECHHHHHHHHHHST
T ss_pred hccCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhC-CcCcCCCccccccCcccccCcCHHHHHHHHHHhh
Confidence 3467789999999999999998 999999999999986543 7899999988765322236678888888877654
No 25
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.46 E-value=1.2e-14 Score=104.46 Aligned_cols=82 Identities=23% Similarity=0.515 Sum_probs=60.2
Q ss_pred CCCCCCccccccccccCCCceec-cccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcCCC
Q psy2696 31 SCGPKNPLLCHVCDDYYTEPCLL-SCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAENP 109 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P~~l-~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~~~ 109 (180)
...+.+.+.|+||++.|.+|+.+ +|||+||..|+..|+..+...||.|+..+.... .+.+|..+..++..+....
T Consensus 48 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~---~l~~~~~l~~~i~~~~~~~- 123 (165)
T 2ckl_B 48 PRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKR---SLRPDPNFDALISKIYPSR- 123 (165)
T ss_dssp --CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSGG---GEEECHHHHHHHHHHC----
T ss_pred hhhCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCcc---cCCcCHHHHHHHHHHHcch-
Confidence 34567788999999999999987 999999999999997766778999999875433 3678899999998886543
Q ss_pred CCCCcCccc
Q psy2696 110 PCANCDKRD 118 (180)
Q Consensus 110 ~c~~C~~h~ 118 (180)
..|..|.
T Consensus 124 --~~~~~~~ 130 (165)
T 2ckl_B 124 --DEYEAHQ 130 (165)
T ss_dssp ---------
T ss_pred --hHHHHHH
Confidence 3344454
No 26
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=7.1e-14 Score=89.97 Aligned_cols=57 Identities=30% Similarity=0.695 Sum_probs=48.8
Q ss_pred CCCCCCCccccccccccCCC----ceeccccccchHHhhhccccC--CccCCCCCCCCcccCC
Q psy2696 30 TSCGPKNPLLCHVCDDYYTE----PCLLSCYHSFCARCLRGRTVD--GKLSCPICGQHTLLKE 86 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~----P~~l~C~H~fC~~Cl~~~~~~--~~~~CP~Cr~~~~~~~ 86 (180)
..+.+.+.+.|+||++.|.+ |+.++|||+||..|+..|... ....||.||..+....
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 70 (88)
T 2ct2_A 8 NLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITS 70 (88)
T ss_dssp SCCCCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSS
T ss_pred ChhhccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchh
Confidence 35677889999999999998 999999999999999998543 3678999999876653
No 27
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=99.45 E-value=8.2e-14 Score=87.75 Aligned_cols=57 Identities=18% Similarity=0.433 Sum_probs=48.0
Q ss_pred CCCCCCCccccccccccCC--Cceecc--ccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 30 TSCGPKNPLLCHVCDDYYT--EPCLLS--CYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~--~P~~l~--C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
....+++++.||||++.+. ++.++| |||+||..|+..++......||.||..+....
T Consensus 4 ~~~~~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 4 SPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP 64 (78)
T ss_dssp CSCCCCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCS
T ss_pred cccccccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 3566788999999999995 566666 99999999999988767789999999887655
No 28
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.45 E-value=2.4e-14 Score=97.37 Aligned_cols=71 Identities=24% Similarity=0.373 Sum_probs=57.9
Q ss_pred CCCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHH
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVA 104 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~ 104 (180)
+...+.+.+.|+||++.+.+|+.++|||+||..|+..|.......||.||..+.... +..+..+.+.+..+
T Consensus 11 ~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~----~~~~~~l~~~i~~l 81 (118)
T 3hct_A 11 FDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQ----LFPDNFAKREILSL 81 (118)
T ss_dssp BSSCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGG----CEECHHHHHHHHTS
T ss_pred hccCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHh----cccCHHHHHHHccc
Confidence 456788899999999999999999999999999999986555558999999887655 55666666655543
No 29
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.43 E-value=3.1e-14 Score=99.46 Aligned_cols=51 Identities=37% Similarity=0.892 Sum_probs=43.8
Q ss_pred CCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 34 PKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
+++++.|+||++.|.+|++++|||+||..|+..|+.. ...||.||..+...
T Consensus 50 ~~~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 50 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKR-KIECPICRKDIKSK 100 (138)
T ss_dssp HHHHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTT-CSBCTTTCCBCCCE
T ss_pred ccccCCCcccCcccCCceECCCCCCccHHHHHHHHHc-CCcCCCCCCcCCCC
Confidence 4567899999999999999999999999999998543 46799999987544
No 30
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=2.5e-13 Score=84.02 Aligned_cols=52 Identities=25% Similarity=0.548 Sum_probs=44.1
Q ss_pred CCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
...+.+.|+||++.+.+|+.++|||.||..|+..|... ...||.||..+...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 11 PSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWL-GKRCALCRQEIPED 62 (71)
T ss_dssp SSSSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTC-SSBCSSSCCBCCHH
T ss_pred cCCCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHC-CCcCcCcCchhCHh
Confidence 44567899999999999999999999999999998543 36899999987543
No 31
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=99.41 E-value=2.8e-14 Score=96.74 Aligned_cols=76 Identities=18% Similarity=0.415 Sum_probs=57.0
Q ss_pred CCCCCCCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHH
Q psy2696 26 APTPTSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVA 104 (180)
Q Consensus 26 ~~~~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~ 104 (180)
.+......+.+.+.|+||++.|.+|+.++|||+||..|+..|.......||.|+..+...+ ..+.+..+..++..+
T Consensus 12 ~~~~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~---~~~~~~~l~~~i~~l 87 (116)
T 1rmd_A 12 LAVDFPAHFVKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTD---LESPVKSFLNILNSL 87 (116)
T ss_dssp BSSCCCHHHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG---CBCCCHHHHHHHHHC
T ss_pred hhhhhHHhccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhh---ccccHHHHHHHHHHh
Confidence 3334455677789999999999999999999999999999987655668999999887655 123344444444333
No 32
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.38 E-value=2.6e-13 Score=104.84 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=61.1
Q ss_pred CCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcC
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAE 107 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~ 107 (180)
...+.+.||||+++|.+|++++|||+||..||..|+..+...||.|+..+...+ +.+|..+..+++.+...
T Consensus 204 ~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~----l~~n~~l~~~i~~~~~~ 274 (281)
T 2c2l_A 204 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQ----LIPNLAMKEVIDAFISE 274 (281)
T ss_dssp CCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGG----CEECHHHHHHHHHHHTT
T ss_pred CCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhc----CcccHHHHHHHHHHHHH
Confidence 445689999999999999999999999999999997654455999999987766 88999999999887654
No 33
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=99.38 E-value=2.1e-13 Score=98.60 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=61.5
Q ss_pred CCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcC
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAE 107 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~ 107 (180)
..+.+.+.||||+++|.+|++++|||+||..||..|+..+...||.|+..+...+ +.+|..+..+++.+...
T Consensus 101 ~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~----L~pN~~Lk~~Ie~~~~~ 172 (179)
T 2f42_A 101 REIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQ----LIPNLAMKEVIDAFIQE 172 (179)
T ss_dssp CCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG----CEECHHHHHHHHHHHHH
T ss_pred cCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhh----CcchHHHHHHHHHHHHH
Confidence 4567799999999999999999999999999999997543337999999887766 88999999998877543
No 34
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=1.9e-13 Score=83.85 Aligned_cols=53 Identities=32% Similarity=0.733 Sum_probs=44.6
Q ss_pred CCCCCCCccccccccccCCCc-------eeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEP-------CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P-------~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
....+.+...|+||++.|.+| +.++|||.||..|+..|... ...||.||..+.
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 8 TGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKIN 67 (69)
T ss_dssp CCCCTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-CSSCTTTCCCCC
T ss_pred cccCCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc-CCCCCCCCCccC
Confidence 345667789999999999887 88999999999999998544 457999998764
No 35
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.37 E-value=2.6e-13 Score=91.24 Aligned_cols=53 Identities=26% Similarity=0.629 Sum_probs=45.9
Q ss_pred CCCccccccccccCCCceeccccccchHHhhhccccC--CccCCCCCCCCcccCC
Q psy2696 34 PKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVD--GKLSCPICGQHTLLKE 86 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~--~~~~CP~Cr~~~~~~~ 86 (180)
+.+.+.|+||.+.|.+|+.++|||+||..|+..|... +...||.|+..+....
T Consensus 18 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 72 (112)
T 1jm7_A 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 (112)
T ss_dssp HHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTT
T ss_pred ccCCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhh
Confidence 4557899999999999999999999999999998643 4478999999887765
No 36
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.34 E-value=3e-13 Score=82.19 Aligned_cols=51 Identities=27% Similarity=0.614 Sum_probs=44.0
Q ss_pred Cccccccccc-cCCCc----eeccccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 36 NPLLCHVCDD-YYTEP----CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 36 ~~l~C~iC~~-~~~~P----~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
+++.|+||++ .|.+| ..++|||+||..|+.+|+..+...||.||..+...+
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 57 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCC
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccccc
Confidence 4688999999 89988 467999999999999997666778999999887654
No 37
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=99.34 E-value=9.1e-14 Score=97.34 Aligned_cols=55 Identities=22% Similarity=0.587 Sum_probs=48.5
Q ss_pred CCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 31 SCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
.+.+.+.+.|+||+++|.+|+.++|||+||..||..|+..+...||.||..+...
T Consensus 25 ~~~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 79 (141)
T 3knv_A 25 GTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYE 79 (141)
T ss_dssp GGGCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCCC
T ss_pred hccCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHHHhcCCCCCCCCCCccccc
Confidence 3678889999999999999999999999999999999876677899999876443
No 38
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.32 E-value=1.9e-12 Score=81.46 Aligned_cols=55 Identities=25% Similarity=0.461 Sum_probs=45.3
Q ss_pred CCCCCCccccccccccCCCc---eeccccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 31 SCGPKNPLLCHVCDDYYTEP---CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P---~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
.+.+.+...|+||++.|.++ ..++|+|.||..||.+|.... ..||.||..+....
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 9 EEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQH-DSCPVCRKSLTGQN 66 (78)
T ss_dssp CTTSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTT-CSCTTTCCCCCCSC
T ss_pred cccCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcC-CcCcCcCCccCCcc
Confidence 45567789999999999865 567999999999999986443 68999999987665
No 39
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=99.32 E-value=3.3e-13 Score=97.39 Aligned_cols=71 Identities=24% Similarity=0.373 Sum_probs=57.3
Q ss_pred CCCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHH
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVA 104 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~ 104 (180)
+...+.+.+.|+||+++|.+|+.++|||+||..|+.+|+......||.||..+.... +.++..+.+.+..+
T Consensus 11 ~~~~~~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~----~~~~~~~~~~i~~l 81 (170)
T 3hcs_A 11 FDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQ----LFPDNFAKREILSL 81 (170)
T ss_dssp ESSCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGG----CEECHHHHHHHHTS
T ss_pred hccCCCCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhh----hhhhHHHHHHHhhc
Confidence 456788999999999999999999999999999999986554558999999887654 44556555555543
No 40
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=99.28 E-value=2e-12 Score=98.00 Aligned_cols=72 Identities=21% Similarity=0.373 Sum_probs=61.5
Q ss_pred CCCCCCccccccccccCCCceec-cccccchHHhhhccccC-CccCCCC--CCCCcccCCCCCCCCChHHHHHHHHHHhc
Q psy2696 31 SCGPKNPLLCHVCDDYYTEPCLL-SCYHSFCARCLRGRTVD-GKLSCPI--CGQHTLLKEGSTLPPPDNVLKQLIEVANA 106 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P~~l-~C~H~fC~~Cl~~~~~~-~~~~CP~--Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~ 106 (180)
.......+.||||+++|.+|++. .|||+||..||..||.. +.+.||+ |+..+...+ +.+|..+.++++..+.
T Consensus 175 v~~~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~d----L~pN~~L~~lve~~k~ 250 (267)
T 3htk_C 175 IEGGKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRD----FVRDPIMELRCKIAKM 250 (267)
T ss_dssp CCSSBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGG----EEECHHHHHHHHHHHH
T ss_pred ecCCceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhh----CCcCHHHHHHHHHHHH
Confidence 34568899999999999999975 99999999999999765 5689999 999887776 8889999888877643
No 41
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.28 E-value=4.3e-13 Score=82.82 Aligned_cols=53 Identities=32% Similarity=0.741 Sum_probs=44.6
Q ss_pred CCCCccccccccccCCCc-------eeccccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 33 GPKNPLLCHVCDDYYTEP-------CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P-------~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
...+.+.|+||++.|.+| +.++|||+||..|+.+|.... ..||.||..+...+
T Consensus 6 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~~ 65 (71)
T 3ng2_A 6 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA-NTCPTCRKKINHKR 65 (71)
T ss_dssp CCTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC-SBCTTTCCBCCCCS
T ss_pred CCCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC-CCCCCCCCccChhh
Confidence 345678999999999988 889999999999999985433 58999999887655
No 42
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=4.1e-12 Score=78.21 Aligned_cols=54 Identities=26% Similarity=0.574 Sum_probs=45.7
Q ss_pred CCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 31 SCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
...+.+...|+||++.+.+ +.++|+|.||..|+..|.. ....||.||..+....
T Consensus 9 ~~~~~~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~-~~~~CP~Cr~~~~~~~ 62 (70)
T 2ecn_A 9 VKQLTDEEECCICMDGRAD-LILPCAHSFCQKCIDKWSD-RHRNCPICRLQMTGAN 62 (70)
T ss_dssp CCCCCCCCCCSSSCCSCCS-EEETTTEEECHHHHHHSSC-CCSSCHHHHHCTTCCC
T ss_pred hhcCCCCCCCeeCCcCccC-cccCCCCcccHHHHHHHHH-CcCcCCCcCCcccCCC
Confidence 3456778999999999999 9999999999999999855 5678999998876544
No 43
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=5.5e-12 Score=78.46 Aligned_cols=55 Identities=24% Similarity=0.400 Sum_probs=43.8
Q ss_pred CCCCCCCccccccccccCCCcee---ccccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEPCL---LSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P~~---l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
....+.+...|+||++.|.++.. ++|+|.||..|+.+|.... ..||.||..+...
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~-~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 8 KVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR-KVCPLCNMPVLQL 65 (74)
T ss_dssp CCCCCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC-SBCTTTCCBCSSC
T ss_pred ccccCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC-CcCCCcCcccccc
Confidence 34566778899999999987644 4999999999999985443 3799999987543
No 44
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=6e-13 Score=83.25 Aligned_cols=59 Identities=20% Similarity=0.433 Sum_probs=46.1
Q ss_pred CCCCCCCCCCCCCCCCccccccccccCCCceecccccc-chHHhhhccccCCccCCCCCCCCccc
Q psy2696 21 PEGEEAPTPTSCGPKNPLLCHVCDDYYTEPCLLSCYHS-FCARCLRGRTVDGKLSCPICGQHTLL 84 (180)
Q Consensus 21 ~~~~~~~~~~~~~l~~~l~C~iC~~~~~~P~~l~C~H~-fC~~Cl~~~~~~~~~~CP~Cr~~~~~ 84 (180)
....++.......+.+.+.|+||++.+.+|+++||||. ||..|+... ..||.||..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 9 LQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV-----DKCPMCYTVITF 68 (75)
T ss_dssp CCCCCCHHHHHHHHHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHHHHC-----SBCTTTCCBCCC
T ss_pred cccccChHHHHHcCCCCCCCCcCCCCCCCEEEecCCCHHHHHHHhhCC-----CCCccCCceecC
Confidence 33334333334556778899999999999999999999 999999753 479999998754
No 45
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.19 E-value=1.3e-11 Score=72.31 Aligned_cols=49 Identities=24% Similarity=0.558 Sum_probs=40.9
Q ss_pred CCCccccccccccCCC---ceecc-ccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 34 PKNPLLCHVCDDYYTE---PCLLS-CYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~---P~~l~-C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
+.+...|+||++.|.+ +..++ |+|.||..|+.+|... ...||.||..+.
T Consensus 2 ~~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~-~~~CP~Cr~~~~ 54 (55)
T 1iym_A 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS-HSTCPLCRLTVV 54 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT-CCSCSSSCCCSC
T ss_pred CCCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc-CCcCcCCCCEeE
Confidence 4567899999999986 77887 9999999999998544 568999998753
No 46
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.18 E-value=7.4e-13 Score=82.60 Aligned_cols=48 Identities=23% Similarity=0.548 Sum_probs=42.4
Q ss_pred CCCCCccccccccccCCCceecccccc-chHHhhhccccCCccCCCCCCCCccc
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCYHS-FCARCLRGRTVDGKLSCPICGQHTLL 84 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~H~-fC~~Cl~~~~~~~~~~CP~Cr~~~~~ 84 (180)
..+.+.+.|+||++.+.+|+++||||. ||..|+..| ..||.||..+..
T Consensus 19 ~~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 19 RRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV-----DKCPMCYTVITF 67 (74)
T ss_dssp HHHHHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTC-----SBCTTTCCBCSE
T ss_pred hcCccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcC-----ccCCCcCcCccC
Confidence 455678899999999999999999999 999999987 579999997754
No 47
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.16 E-value=4.4e-12 Score=76.54 Aligned_cols=50 Identities=32% Similarity=0.713 Sum_probs=42.3
Q ss_pred CccccccccccCCCc-------eeccccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 36 NPLLCHVCDDYYTEP-------CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P-------~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
+.+.|+||++.+.+| ..++|||.||..|+.+|... ...||.||..+...+
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~~ 58 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINHKR 58 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-CSBCTTTCCBCTTTC
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-CCCCCCCCccCCccc
Confidence 467899999999887 78899999999999998544 458999999876554
No 48
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.14 E-value=1.4e-11 Score=72.12 Aligned_cols=47 Identities=21% Similarity=0.548 Sum_probs=39.5
Q ss_pred CccccccccccCCC----ceeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 36 NPLLCHVCDDYYTE----PCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 36 ~~l~C~iC~~~~~~----P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
+...|+||++.|.+ ++.++|+|.||..|+.+|.... ..||.||..+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG-YRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT-CCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC-CcCCCCCCcCC
Confidence 45789999999965 7889999999999999985444 68999998753
No 49
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=2.1e-11 Score=76.07 Aligned_cols=52 Identities=27% Similarity=0.568 Sum_probs=42.7
Q ss_pred CCCCccccccccccCCCc---eeccccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 33 GPKNPLLCHVCDDYYTEP---CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P---~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
...+...|+||++.|.++ ..++|+|.||..|+.+|... ...||.||..+...
T Consensus 19 ~~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~-~~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 19 HQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA-NRTCPICRADSGPS 73 (75)
T ss_dssp CSSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH-CSSCTTTCCCCCCC
T ss_pred ccCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc-CCcCcCcCCcCCCC
Confidence 445678999999999877 77899999999999998543 34799999887543
No 50
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.14 E-value=2.6e-11 Score=78.49 Aligned_cols=51 Identities=22% Similarity=0.465 Sum_probs=42.5
Q ss_pred CCCCccccccccccCCC---ceeccccccchHHhhhccccCCccCCCCCCCCccc
Q psy2696 33 GPKNPLLCHVCDDYYTE---PCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLL 84 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~---P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~ 84 (180)
...+...|+||++.|.+ ++.++|+|.||..||..|... ...||.||..+..
T Consensus 36 ~~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~-~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 36 AVGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK-SGTCPVCRCMFPP 89 (91)
T ss_dssp SSSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT-TCBCTTTCCBSSC
T ss_pred ccCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc-CCcCcCcCccCCC
Confidence 34567899999999986 788999999999999998644 4589999987653
No 51
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.12 E-value=5.6e-11 Score=72.81 Aligned_cols=53 Identities=21% Similarity=0.472 Sum_probs=42.4
Q ss_pred CCCCCccccccccccCC---CceeccccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 32 CGPKNPLLCHVCDDYYT---EPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~---~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
....+...|+||++.|. .++.++|+|.||..|+..|.... ..||.||..+...
T Consensus 9 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 9 TEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITN-KKCPICRVDIEAQ 64 (69)
T ss_dssp CSTTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHC-SBCTTTCSBSCSC
T ss_pred CcCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcC-CCCcCcCccccCc
Confidence 34556789999999985 46789999999999999985433 3699999987654
No 52
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.10 E-value=2.4e-11 Score=74.21 Aligned_cols=48 Identities=23% Similarity=0.556 Sum_probs=40.4
Q ss_pred CccccccccccCCCc-eeccccccchHHhhhccccCCccCCCCCCCCccc
Q psy2696 36 NPLLCHVCDDYYTEP-CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLL 84 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P-~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~ 84 (180)
+...|+||++.+.+| +.++|||.||..|+..|... ...||.||..+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~-~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQ-NPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHH-SCSTTTTCCCCCC
T ss_pred CCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhC-cCcCcCCChhhHh
Confidence 457899999999987 78899999999999998543 3589999988753
No 53
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.07 E-value=3e-11 Score=83.20 Aligned_cols=51 Identities=31% Similarity=0.727 Sum_probs=44.0
Q ss_pred CCccccccccccCCCc-------eeccccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 35 KNPLLCHVCDDYYTEP-------CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P-------~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
.+.+.|+||++.|.+| +.++|||+||..||.+|.... ..||.|+..+....
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA-NTCPTCRKKINHKR 62 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTC-SBCTTTCCBCTTTC
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhC-CCCCCCCCcCcccc
Confidence 4578999999999998 899999999999999986543 48999999887655
No 54
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.02 E-value=1.1e-10 Score=78.53 Aligned_cols=50 Identities=30% Similarity=0.537 Sum_probs=41.0
Q ss_pred ccccccccccCCCce------------------eccccccchHHhhhcccc----CCccCCCCCCCCcccCC
Q psy2696 37 PLLCHVCDDYYTEPC------------------LLSCYHSFCARCLRGRTV----DGKLSCPICGQHTLLKE 86 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~------------------~l~C~H~fC~~Cl~~~~~----~~~~~CP~Cr~~~~~~~ 86 (180)
...|+||++.|.+|. .++|+|.||..||..|.. .....||.||..+....
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~ 96 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKT 96 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCC
Confidence 458999999997654 689999999999999863 34678999999876543
No 55
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.96 E-value=1.6e-10 Score=72.84 Aligned_cols=48 Identities=27% Similarity=0.621 Sum_probs=41.7
Q ss_pred CCCCccccccccccCCCceecccccc-chHHhhhccccCCccCCCCCCCCcccC
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLLSCYHS-FCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l~C~H~-fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
.+.+...|+||++.+.+|+.+||||. ||..|+..++ .||.||..+...
T Consensus 14 ~l~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~-----~CP~Cr~~i~~~ 62 (79)
T 2yho_A 14 KLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQ-----SCPVCRSRVEHV 62 (79)
T ss_dssp HHHHHTBCTTTSSSBCCEEEETTCBCCBCHHHHTTCS-----BCTTTCCBCCEE
T ss_pred cCCCCCEeEEeCcccCcEEEECCCCHHHHHHHHHhcC-----cCCCCCchhhCe
Confidence 34567899999999999999999999 9999998864 799999987654
No 56
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=8.2e-10 Score=67.46 Aligned_cols=47 Identities=30% Similarity=0.654 Sum_probs=40.2
Q ss_pred CCCCccccccccccCCCceecccccc-chHHhhhccccCCccCCCCCCCCccc
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLLSCYHS-FCARCLRGRTVDGKLSCPICGQHTLL 84 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l~C~H~-fC~~Cl~~~~~~~~~~CP~Cr~~~~~ 84 (180)
...+...|.||++.+.+++++||||. ||..|+... ..||.||..+..
T Consensus 11 ~~~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~-----~~CP~CR~~i~~ 58 (68)
T 2ea5_A 11 SEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYF-----QQCPMCRQFVQE 58 (68)
T ss_dssp SCCCSSCCSSSSSSCCCCEETTTTBCCSCTTHHHHC-----SSCTTTCCCCCC
T ss_pred cCCCCCCCCCcCcCCCCEEEECCCChhhhHHHHhcC-----CCCCCCCcchhc
Confidence 34457899999999999999999999 999999853 479999997754
No 57
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=2.1e-09 Score=67.97 Aligned_cols=49 Identities=22% Similarity=0.523 Sum_probs=38.4
Q ss_pred CccccccccccCCC--------------ceecc-ccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 36 NPLLCHVCDDYYTE--------------PCLLS-CYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 36 ~~l~C~iC~~~~~~--------------P~~l~-C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
+...|+||++.|.+ ++.++ |+|.|+..||.+|.... ..||.||..+...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~-~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN-NRCPLCQQDWVVQ 77 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC-CBCTTTCCBCCEE
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC-CCCCCcCCCcchh
Confidence 45679999998865 44554 99999999999985543 4899999987543
No 58
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.88 E-value=6e-10 Score=89.31 Aligned_cols=52 Identities=23% Similarity=0.529 Sum_probs=44.2
Q ss_pred CCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
.....|+||++.+.+|+.+||||.||..|+..|.......||.||..+....
T Consensus 330 ~~~~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~ 381 (389)
T 2y1n_A 330 STFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 381 (389)
T ss_dssp TSSSBCTTTSSSBCCEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEE
T ss_pred CCCCCCCccCcCCCCeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCce
Confidence 3447999999999999999999999999999886545668999999876543
No 59
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.83 E-value=1.2e-09 Score=65.78 Aligned_cols=47 Identities=26% Similarity=0.535 Sum_probs=39.9
Q ss_pred CccccccccccCCCceec--ccccc-chHHhhhccccCCccCCCCCCCCcc
Q psy2696 36 NPLLCHVCDDYYTEPCLL--SCYHS-FCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~~l--~C~H~-fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
....|+||++.+.++.++ ||||. ||..|+..++..+ ..||.||..+.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~CPiCR~~i~ 55 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAG-ASCPICKKEIQ 55 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTT-CBCTTTCCBCC
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhC-CcCCCcCchhh
Confidence 356899999999999887 99998 9999999876443 57999999764
No 60
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.82 E-value=1.4e-09 Score=65.57 Aligned_cols=48 Identities=21% Similarity=0.513 Sum_probs=40.6
Q ss_pred CCccccccccccCCCceec--ccccc-chHHhhhccccCCccCCCCCCCCcc
Q psy2696 35 KNPLLCHVCDDYYTEPCLL--SCYHS-FCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l--~C~H~-fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
.+...|.||++.+.++..+ ||||. ||..|+..++.. ...||.||..+.
T Consensus 6 ~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~CPiCR~~i~ 56 (64)
T 2vje_A 6 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKR-NKPCPVCRQPIQ 56 (64)
T ss_dssp GGGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHT-TCCCTTTCCCCC
T ss_pred CCcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHc-CCcCCCcCcchh
Confidence 3567899999999999987 99999 899999988643 357999999764
No 61
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.80 E-value=1e-09 Score=71.36 Aligned_cols=46 Identities=26% Similarity=0.597 Sum_probs=38.0
Q ss_pred CccccccccccCCCceec---cccccchHHhhhccccC-------CccCCCC--CCCC
Q psy2696 36 NPLLCHVCDDYYTEPCLL---SCYHSFCARCLRGRTVD-------GKLSCPI--CGQH 81 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~~~~-------~~~~CP~--Cr~~ 81 (180)
+.+.|+||++.+..|..+ +|||.||..|+..++.. ..+.||. |+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 468899999999988654 79999999999987431 3579999 9987
No 62
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.75 E-value=2.2e-09 Score=85.31 Aligned_cols=48 Identities=25% Similarity=0.504 Sum_probs=42.2
Q ss_pred CCCCCccccccccccCCCceecccccc-chHHhhhccccCCccCCCCCCCCccc
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCYHS-FCARCLRGRTVDGKLSCPICGQHTLL 84 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~H~-fC~~Cl~~~~~~~~~~CP~Cr~~~~~ 84 (180)
..+++.+.|+||++.+.+|+.+||||. ||..|+..+ ..||.||..+..
T Consensus 290 ~~l~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~-----~~CP~CR~~i~~ 338 (345)
T 3t6p_A 290 RRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSL-----RKCPICRGIIKG 338 (345)
T ss_dssp HHHHTTCBCTTTSSSBCCEEEETTCCEEECTTTGGGC-----SBCTTTCCBCCE
T ss_pred HhCcCCCCCCccCCcCCceEEcCCCChhHhHHHHhcC-----CcCCCCCCCccC
Confidence 345678999999999999999999999 999999987 479999998754
No 63
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.73 E-value=1.5e-09 Score=74.54 Aligned_cols=52 Identities=31% Similarity=0.697 Sum_probs=43.5
Q ss_pred CCCccccccccccCCCc-------eeccccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 34 PKNPLLCHVCDDYYTEP-------CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P-------~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
..+...|+||++.|.+| +.++|||.||..|+.+|... ...||.||..+...+
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~~ 127 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINHKR 127 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH-CSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHc-CCCCCCCCCcCChhc
Confidence 35678999999999876 88899999999999998543 358999999886554
No 64
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.65 E-value=1.3e-08 Score=67.44 Aligned_cols=48 Identities=17% Similarity=0.376 Sum_probs=39.0
Q ss_pred CccccccccccCCCc------------------eeccccccchHHhhhccccCCccCCCCCCCCccc
Q psy2696 36 NPLLCHVCDDYYTEP------------------CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLL 84 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P------------------~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~ 84 (180)
+.-.|+||++.|.++ ..++|+|.|+..||..|... ...||.||.....
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-RQVCPLDNREWEF 101 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT-CSBCSSSCSBCCE
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc-CCcCcCCCCccee
Confidence 456799999999865 34789999999999998544 5679999998544
No 65
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=6.1e-08 Score=60.94 Aligned_cols=52 Identities=17% Similarity=0.473 Sum_probs=42.3
Q ss_pred CCccccccccccCC--Cceecccc-----ccchHHhhhccccC-CccCCCCCCCCcccCC
Q psy2696 35 KNPLLCHVCDDYYT--EPCLLSCY-----HSFCARCLRGRTVD-GKLSCPICGQHTLLKE 86 (180)
Q Consensus 35 ~~~l~C~iC~~~~~--~P~~l~C~-----H~fC~~Cl~~~~~~-~~~~CP~Cr~~~~~~~ 86 (180)
.+...|.||++.|. ++.++||. |.|...||.+|... +...||.|+..+....
T Consensus 13 ~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 34578999999885 68888996 99999999999543 4468999999987654
No 66
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.50 E-value=1.8e-08 Score=60.06 Aligned_cols=49 Identities=20% Similarity=0.253 Sum_probs=41.4
Q ss_pred ccccccccccCCCceec-cccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 37 PLLCHVCDDYYTEPCLL-SCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~~l-~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
.+.|+|+++.+.+|+++ ++||+|++.||.+|.... ..||..+..+...+
T Consensus 3 ~~~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~~-~~cP~t~~~L~~~~ 52 (61)
T 2bay_A 3 HMLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDT-GNDPITNEPLSIEE 52 (61)
T ss_dssp -CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHH-SBCTTTCCBCCGGG
T ss_pred eEEecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHhC-CCCcCCcCCCChhh
Confidence 47899999999999999 899999999999995433 24999998876655
No 67
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=98.31 E-value=9e-08 Score=64.39 Aligned_cols=47 Identities=19% Similarity=0.477 Sum_probs=0.4
Q ss_pred ccccccccccCCCce------------------eccccccchHHhhhccccCCccCCCCCCCCccc
Q psy2696 37 PLLCHVCDDYYTEPC------------------LLSCYHSFCARCLRGRTVDGKLSCPICGQHTLL 84 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~------------------~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~ 84 (180)
.-.|+||++.|.++. .++|+|.|+..||..|... ...||.||.....
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~-~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-RQVCPLDNREWEF 112 (117)
T ss_dssp C-----------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc-CCcCCCCCCeeee
Confidence 458999999997642 2489999999999998544 4579999987543
No 68
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=98.30 E-value=7.8e-07 Score=58.22 Aligned_cols=72 Identities=21% Similarity=0.516 Sum_probs=46.1
Q ss_pred Ccccccccccc-CCCcee--ccccccchHHhhhc-cccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHhcCCCCC
Q psy2696 36 NPLLCHVCDDY-YTEPCL--LSCYHSFCARCLRG-RTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVANAENPPC 111 (180)
Q Consensus 36 ~~l~C~iC~~~-~~~P~~--l~C~H~fC~~Cl~~-~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~~~~c 111 (180)
+++.|++|.+. +.+|+. ++|+|+||..|+.. +.....+. +..+..+ +.. ....-
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~~~~~~~----~h~l~~~-----~~~-------------~~~~~ 59 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFT----GHRLIEP-----IPD-------------SHIRG 59 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSCSCSSST----TCCBSSC-----CCS-------------CCSSC
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhccCCccC----CCeeecc-----ccc-------------cCccC
Confidence 46899999975 677877 89999999999997 43221110 0000000 100 01123
Q ss_pred CCcCcc-cccccccccCCH
Q psy2696 112 ANCDKR-DRNAMYFCSTCA 129 (180)
Q Consensus 112 ~~C~~h-~~~~~~~C~~C~ 129 (180)
..|+.| ++.+++||.+|.
T Consensus 60 ~~C~~H~~e~l~~fC~~~~ 78 (101)
T 2jun_A 60 LMCLEHEDEKVNMYCVTDD 78 (101)
T ss_dssp CCCSSCSSSCCCEEETTTT
T ss_pred CcCcCcCCCcceEECCCCC
Confidence 579999 588999999875
No 69
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=98.27 E-value=3.1e-07 Score=59.15 Aligned_cols=46 Identities=24% Similarity=0.551 Sum_probs=38.9
Q ss_pred cccccccccCCC-ceeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 38 LLCHVCDDYYTE-PCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 38 l~C~iC~~~~~~-P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
..|++|.-.+.. .+.+||.|.||++|...|...+...||.|+..+.
T Consensus 2 hfC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 2 HFCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQ 48 (101)
T ss_dssp CBCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCS
T ss_pred eecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeee
Confidence 368999988875 5788999999999999887666778999998764
No 70
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=97.91 E-value=6.9e-06 Score=48.52 Aligned_cols=50 Identities=18% Similarity=0.446 Sum_probs=39.8
Q ss_pred CCccccccccccCCCceecccc--c---cchHHhhhcccc-CCccCCCCCCCCccc
Q psy2696 35 KNPLLCHVCDDYYTEPCLLSCY--H---SFCARCLRGRTV-DGKLSCPICGQHTLL 84 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l~C~--H---~fC~~Cl~~~~~-~~~~~CP~Cr~~~~~ 84 (180)
.+...|.||++...+|.++||. + .|...||.+|.. .+...||.|+..+..
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 4567899999888888888865 4 899999999953 356789999987654
No 71
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.87 E-value=6.7e-05 Score=46.08 Aligned_cols=53 Identities=15% Similarity=0.353 Sum_probs=40.4
Q ss_pred CCCCccccccccccCCCceec-cccccchHHhhhccccCC-ccCCCCCCCCcccC
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLL-SCYHSFCARCLRGRTVDG-KLSCPICGQHTLLK 85 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l-~C~H~fC~~Cl~~~~~~~-~~~CP~Cr~~~~~~ 85 (180)
.....-.|.||.+.+..-... .|+|.|...||.+|.... ...||.|+......
T Consensus 11 y~~~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 11 YPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 65 (74)
T ss_dssp CSSSSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSC
T ss_pred ccCCCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCC
Confidence 344567899999999754433 799999999999996542 36899999876543
No 72
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=97.16 E-value=0.00012 Score=57.64 Aligned_cols=52 Identities=23% Similarity=0.443 Sum_probs=39.0
Q ss_pred CCCCccccccccccCCC----ce----eccccccchHHhhhccccC----------CccCCCCCCCCccc
Q psy2696 33 GPKNPLLCHVCDDYYTE----PC----LLSCYHSFCARCLRGRTVD----------GKLSCPICGQHTLL 84 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~----P~----~l~C~H~fC~~Cl~~~~~~----------~~~~CP~Cr~~~~~ 84 (180)
.......|+||...+.+ |. ...|+|.|...||.+|... ....||.|+..+..
T Consensus 304 ~ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 304 EDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp CCCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred cccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 34567899999999875 42 2369999999999999432 12579999997653
No 73
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=94.96 E-value=0.017 Score=43.31 Aligned_cols=46 Identities=15% Similarity=0.392 Sum_probs=37.8
Q ss_pred ccccccccccCCCceecc-ccccchHHhhhccccC-CccCCCCCCCCc
Q psy2696 37 PLLCHVCDDYYTEPCLLS-CYHSFCARCLRGRTVD-GKLSCPICGQHT 82 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~~l~-C~H~fC~~Cl~~~~~~-~~~~CP~Cr~~~ 82 (180)
...|.+|.+....-+..+ |+|.|...|+.+|... +...||.|+..-
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W 227 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYW 227 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBC
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 678999999998666554 9999999999998644 457899998864
No 74
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=93.68 E-value=0.074 Score=32.54 Aligned_cols=43 Identities=30% Similarity=0.861 Sum_probs=31.9
Q ss_pred CCccccccccccCCCceeccc----cccchHHhhhcc----ccCCccCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLLSC----YHSFCARCLRGR----TVDGKLSCPI 77 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l~C----~H~fC~~Cl~~~----~~~~~~~CP~ 77 (180)
...+.|.+|.+.+.+-.+..| .|.||.-|-... ..+..+.||.
T Consensus 13 ~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk~q~~~~EvyCPS 63 (93)
T 2cs3_A 13 SGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPS 63 (93)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHHHSSSCCCCTT
T ss_pred CCeeEeecchhhhccCceeeCCCccCCeeeccccHHHHHhcCCCCcEECCC
Confidence 346899999999998655544 699999997664 2346677874
No 75
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=93.62 E-value=0.068 Score=47.52 Aligned_cols=68 Identities=13% Similarity=0.184 Sum_probs=56.2
Q ss_pred CCCCccccccccccCCCceecccc-ccchHHhhhccccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHHh
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLLSCY-HSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVAN 105 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l~C~-H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~~ 105 (180)
..-+++.|||=.++..||+++|-| ++|=+..|.+|... ...||.=+..+.... +.+|..+...++...
T Consensus 887 ~iP~~F~cPIs~~lM~DPVilpsG~~TydR~~I~~wl~~-~~tdP~Tr~~L~~~~----liPN~~Lk~~I~~w~ 955 (968)
T 3m62_A 887 DVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLS-DSTDPFNRMPLKLED----VTPNEELRQKILCFK 955 (968)
T ss_dssp CSCGGGBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT-CCBCTTTCCBCCGGG----CEECHHHHHHHHHHH
T ss_pred CCcHHhCCcchhhHHhCCeEcCCCCEEECHHHHHHHHhc-CCCCCCCCCCCCccc----ccccHHHHHHHHHHH
Confidence 445689999999999999999997 69999999998654 347999988887666 778988887776653
No 76
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=93.13 E-value=0.21 Score=31.58 Aligned_cols=52 Identities=27% Similarity=0.467 Sum_probs=35.9
Q ss_pred CCCCCccccccccccCCCceecccc-ccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCY-HSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~-H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
..+-..+.|..|=..++ -.+.|. |++|+.||.... ..+-.||.|+..++.+-
T Consensus 23 ~s~~G~~nCKsCWf~~k--~LV~C~dHYLCl~CLtlmL-~~SdrCpIC~~pLPtkl 75 (99)
T 2ko5_A 23 ATHLGPQFCKSCWFENK--GLVECNNHYLCLNCLTLLL-SVSNRCPICKMPLPTKL 75 (99)
T ss_dssp CCCSCCCCCCSSCSCCS--SEEECSSCEEEHHHHHHTC-SSSSEETTTTEECCCCS
T ss_pred ccccCcccChhhccccC--CeeeecchhhHHHHHHHHH-hhccCCcccCCcCCcce
Confidence 34445667777754443 455665 999999998763 34457999999887654
No 77
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.02 E-value=0.15 Score=40.50 Aligned_cols=67 Identities=15% Similarity=0.325 Sum_probs=48.7
Q ss_pred CCCccccccccccCCCce-eccccccchHHh--hhcc-ccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHH
Q psy2696 34 PKNPLLCHVCDDYYTEPC-LLSCYHSFCARC--LRGR-TVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVA 104 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P~-~l~C~H~fC~~C--l~~~-~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~ 104 (180)
+.-.|.||+=...+..|. ...|.|.-|.+- +-.. .....+.||+|.......+ |..+.++..++...
T Consensus 246 ~~vSL~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~~d----L~ID~~~~~IL~~~ 316 (371)
T 3i2d_A 246 TIMSLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALEN----LAISEFVDDILQNC 316 (371)
T ss_dssp EEEESBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCGGG----EEEBHHHHHHHTTS
T ss_pred eEEeecCCCccccccccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCHHH----eeEcHHHHHHHHhc
Confidence 344689999999999996 557999855443 2221 3457889999999888777 77777777776544
No 78
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=90.80 E-value=0.91 Score=27.12 Aligned_cols=51 Identities=27% Similarity=0.567 Sum_probs=32.6
Q ss_pred CCCCCccccccccccCCCceec--c--cc-ccchHHhhhccc-cCCccCCCCCCCCcc
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLL--S--CY-HSFCARCLRGRT-VDGKLSCPICGQHTL 83 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l--~--C~-H~fC~~Cl~~~~-~~~~~~CP~Cr~~~~ 83 (180)
....+...| +|........+. . |. .-|...|+.-.. ..+.+.||.|.....
T Consensus 11 ~d~~~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 11 VDPNEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESG 67 (71)
T ss_dssp CCTTSCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCSS
T ss_pred cCCCCCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCcccc
Confidence 344567888 899876544332 2 55 467888886332 236789999976543
No 79
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=89.36 E-value=0.17 Score=40.03 Aligned_cols=68 Identities=18% Similarity=0.415 Sum_probs=49.1
Q ss_pred CCCCccccccccccCCCce-eccccccchHHhh--hcc-ccCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHHH
Q psy2696 33 GPKNPLLCHVCDDYYTEPC-LLSCYHSFCARCL--RGR-TVDGKLSCPICGQHTLLKEGSTLPPPDNVLKQLIEVA 104 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~-~l~C~H~fC~~Cl--~~~-~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~l~~~~ 104 (180)
.+.-.|.||+=...+..|. ...|.|.-|-+-. -.. ...+.+.||+|.......+ +..+.++..++...
T Consensus 211 ~~~vSL~CPlS~~ri~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~~d----L~ID~~~~~IL~~~ 282 (360)
T 4fo9_A 211 SLRVSLMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYES----LILDGLFMEILNDC 282 (360)
T ss_dssp CEEEESBCTTTCSBCSSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCGGG----EEEBHHHHHHHTTC
T ss_pred eeEEeeeCCCccceeccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCHHH----eEEcHHHHHHHHhC
Confidence 3444689999999999996 5579998554322 111 3457889999999888777 77777777776543
No 80
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=89.22 E-value=2.6 Score=26.44 Aligned_cols=47 Identities=30% Similarity=0.699 Sum_probs=30.7
Q ss_pred CCCccccccccccCCCceecc-----cc-ccchHHhhhccc-cCCccCCCCCCCCc
Q psy2696 34 PKNPLLCHVCDDYYTEPCLLS-----CY-HSFCARCLRGRT-VDGKLSCPICGQHT 82 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P~~l~-----C~-H~fC~~Cl~~~~-~~~~~~CP~Cr~~~ 82 (180)
..+...| +|.+..... .+- |. .-|...|+.-.. ..+.+.||.|+...
T Consensus 33 ~~e~~yC-iC~~~~~g~-MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 33 PNEPTYC-LCHQVSYGE-MIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp SCCCBCS-TTCCBCCSC-CCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCC
T ss_pred CCCCcEE-ECCCCCCCC-EeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcC
Confidence 3567888 999876543 333 44 457778876321 23678999997654
No 81
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=88.88 E-value=0.37 Score=30.11 Aligned_cols=47 Identities=21% Similarity=0.578 Sum_probs=35.8
Q ss_pred ccccccccccCC-----Cceec--cccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 37 PLLCHVCDDYYT-----EPCLL--SCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 37 ~l~C~iC~~~~~-----~P~~l--~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
.-.|.||.+..- ++... .|+-.+|..|++--...+...||.|+....
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYk 69 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccc
Confidence 468999999863 23222 588889999997655677789999998875
No 82
>1fre_A Nuclear factor XNF7; zinc-binding protein, BBOX, development, MID-blastula- transition; NMR {Xenopus laevis} SCOP: g.43.1.1
Probab=87.27 E-value=0.23 Score=26.14 Aligned_cols=18 Identities=17% Similarity=0.582 Sum_probs=15.5
Q ss_pred CCcCcccccccccccCCH
Q psy2696 112 ANCDKRDRNAMYFCSTCA 129 (180)
Q Consensus 112 ~~C~~h~~~~~~~C~~C~ 129 (180)
..|+.|++.+++||.++.
T Consensus 4 ~~C~~H~e~l~lfC~~d~ 21 (42)
T 1fre_A 4 EKCSEHDERLKLYCKDDG 21 (42)
T ss_dssp CCCCSSCSSCCCCCCSSS
T ss_pred ccchhhCCeeeEEeCCCC
Confidence 469999999999999864
No 83
>2yvr_A Transcription intermediary factor 1-beta; ZF-B_BOX domain, structural genomics, NPPSFA; 1.80A {Homo sapiens}
Probab=86.99 E-value=0.22 Score=27.40 Aligned_cols=19 Identities=21% Similarity=0.746 Sum_probs=16.6
Q ss_pred CCCcCcc-cccccccccCCH
Q psy2696 111 CANCDKR-DRNAMYFCSTCA 129 (180)
Q Consensus 111 c~~C~~h-~~~~~~~C~~C~ 129 (180)
-..|+.| ++.+++||.+|.
T Consensus 6 ~~~C~~H~~e~l~lfC~~~~ 25 (50)
T 2yvr_A 6 TVYCNVHKHEPLVLFCESCD 25 (50)
T ss_dssp SCBCSSSTTCBCCEEETTTT
T ss_pred CCcCcCCCCCCEEEEeCCCC
Confidence 3679999 899999999976
No 84
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=86.71 E-value=0.63 Score=28.83 Aligned_cols=32 Identities=28% Similarity=0.616 Sum_probs=22.7
Q ss_pred CccccccccccCC-----Cceecc-ccccchHHhhhcc
Q psy2696 36 NPLLCHVCDDYYT-----EPCLLS-CYHSFCARCLRGR 67 (180)
Q Consensus 36 ~~l~C~iC~~~~~-----~P~~l~-C~H~fC~~Cl~~~ 67 (180)
....||-|...+. .++..+ |++.||..|-..|
T Consensus 24 ~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 24 KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 61 (86)
T ss_dssp CEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CEeECcCCCchheecCCCCceEeCCCCCccccccCCch
Confidence 3446998877553 234555 9999999998876
No 85
>2did_A Tripartite motif protein 39; ZF-B-box domian, Zn binding, one sequence two fold, NPPSFA; NMR {Homo sapiens} SCOP: g.43.1.1 PDB: 2dif_A
Probab=85.57 E-value=0.26 Score=27.46 Aligned_cols=19 Identities=16% Similarity=0.335 Sum_probs=16.4
Q ss_pred CCCcCcccccccccccCCH
Q psy2696 111 CANCDKRDRNAMYFCSTCA 129 (180)
Q Consensus 111 c~~C~~h~~~~~~~C~~C~ 129 (180)
-..|+.|++.+++||.+|.
T Consensus 8 ~~~C~~H~e~l~lfC~~d~ 26 (53)
T 2did_A 8 ESLCPQHHEALSLFCYEDQ 26 (53)
T ss_dssp CCBCTTTCCBCCEEESSSC
T ss_pred CCcChhhCCeeeEEeCCCC
Confidence 3679999999999999865
No 86
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=85.42 E-value=0.95 Score=24.88 Aligned_cols=43 Identities=33% Similarity=0.729 Sum_probs=27.3
Q ss_pred ccccccccCCCceec---cccccchHHhhhcc---ccCCccCCCCCCCC
Q psy2696 39 LCHVCDDYYTEPCLL---SCYHSFCARCLRGR---TVDGKLSCPICGQH 81 (180)
Q Consensus 39 ~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~ 81 (180)
.|.+|.+.-....++ .|...|...|+..- ...+.+.||.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 477777654322233 47778888898532 23467889999754
No 87
>3ddt_A E3 ubiquitin-protein ligase TRIM63; zinc-binding motif, ring-like fold, coiled coil, cytoplasm, metal-binding, muscle protein, nucleus; 1.90A {Homo sapiens} SCOP: g.43.1.1 PDB: 3q1d_A
Probab=85.22 E-value=0.3 Score=26.58 Aligned_cols=18 Identities=22% Similarity=0.752 Sum_probs=15.9
Q ss_pred CCcCccc-ccccccccCCH
Q psy2696 112 ANCDKRD-RNAMYFCSTCA 129 (180)
Q Consensus 112 ~~C~~h~-~~~~~~C~~C~ 129 (180)
..|+.|. +.+++||.+|.
T Consensus 7 ~~C~~H~~e~l~lfC~~d~ 25 (48)
T 3ddt_A 7 PMCKEHEDEKINIYCLTCE 25 (48)
T ss_dssp CBCSSSTTSBCCEEETTTT
T ss_pred CcCCCCCCccccEEcCCCC
Confidence 6799998 88999999875
No 88
>2d8u_A Ubiquitin ligase TRIM63; tripartite motif-containing 63, muscle-specific ring finger protein 1, MURF1, ring finger protein 28; NMR {Homo sapiens} SCOP: g.43.1.1
Probab=84.39 E-value=0.32 Score=28.14 Aligned_cols=19 Identities=26% Similarity=0.725 Sum_probs=16.5
Q ss_pred CCCcCcc-cccccccccCCH
Q psy2696 111 CANCDKR-DRNAMYFCSTCA 129 (180)
Q Consensus 111 c~~C~~h-~~~~~~~C~~C~ 129 (180)
-..|+.| ++.+++||.+|.
T Consensus 8 ~~~C~~H~~e~l~lfC~~d~ 27 (64)
T 2d8u_A 8 HPMCKEHEDEKINIYCLTCE 27 (64)
T ss_dssp CCCCSSCTTCCCCSEESSSC
T ss_pred CCcCcCcCCCccceEcCcCC
Confidence 3679999 899999999976
No 89
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=84.11 E-value=2.5 Score=26.09 Aligned_cols=47 Identities=30% Similarity=0.655 Sum_probs=31.8
Q ss_pred CCCCccccccccccCCCceecc---ccccchHHhhhcc---------------ccCCccCCCCCCC
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLLS---CYHSFCARCLRGR---------------TVDGKLSCPICGQ 80 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l~---C~H~fC~~Cl~~~---------------~~~~~~~CP~Cr~ 80 (180)
.+..+-.|.||...-.+ ..+| |+-.|...|+.+. .....++||.|..
T Consensus 11 ~~~~D~~C~VC~~~t~~-~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 11 PVVNDEMCDVCEVWTAE-SLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CCCCSCCCTTTCCCCSS-CCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCCCCcccCcccccccc-ceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 34456789999764433 3343 7889999999874 1235799999943
No 90
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=83.45 E-value=1.7 Score=26.73 Aligned_cols=34 Identities=24% Similarity=0.541 Sum_probs=25.4
Q ss_pred CCCccccccccccCCCc----eeccccccchHHhhhcc
Q psy2696 34 PKNPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGR 67 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~ 67 (180)
..+...|.+|...|.-- .--.||..||..|....
T Consensus 18 d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 55 (84)
T 1z2q_A 18 DEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHR 55 (84)
T ss_dssp TTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCE
T ss_pred CCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCe
Confidence 34567899999999732 12369999999998754
No 91
>2egm_A Tripartite motif-containing protein 41; ZF-B_BOX domain, tripartite motif protein 41, TRIM41, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.71 E-value=0.42 Score=27.17 Aligned_cols=18 Identities=22% Similarity=0.486 Sum_probs=16.0
Q ss_pred CCcCcccccccccccCCH
Q psy2696 112 ANCDKRDRNAMYFCSTCA 129 (180)
Q Consensus 112 ~~C~~h~~~~~~~C~~C~ 129 (180)
..|..|.+.+++||.+|.
T Consensus 19 ~~C~~H~e~L~lfC~~d~ 36 (57)
T 2egm_A 19 GICPKHQEALKLFCEVDE 36 (57)
T ss_dssp SBCTTTCCBCCEEETTTT
T ss_pred CcChhhCceeeEEcCCCC
Confidence 579999999999999865
No 92
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=82.00 E-value=0.17 Score=25.74 Aligned_cols=17 Identities=12% Similarity=0.266 Sum_probs=12.3
Q ss_pred CccccccccccCCCcee
Q psy2696 36 NPLLCHVCDDYYTEPCL 52 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~~ 52 (180)
+.+.||+|+..+..+..
T Consensus 4 EGFiCP~C~~~l~s~~~ 20 (34)
T 3mjh_B 4 EGFICPQCMKSLGSADE 20 (34)
T ss_dssp EEEECTTTCCEESSHHH
T ss_pred cccCCcHHHHHcCCHHH
Confidence 35788888888876643
No 93
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=81.29 E-value=1.6 Score=26.12 Aligned_cols=49 Identities=14% Similarity=0.370 Sum_probs=33.4
Q ss_pred CCCccccccccccCCCceec---cccccchHHhhhccc---cCCccCCCCCCCCc
Q psy2696 34 PKNPLLCHVCDDYYTEPCLL---SCYHSFCARCLRGRT---VDGKLSCPICGQHT 82 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~~---~~~~~~CP~Cr~~~ 82 (180)
-.+...|++|......-..+ .|..-|...|+.-.. ..+.+.||.|....
T Consensus 15 ~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 15 GNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp SCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 34567899999887542233 477788888886542 22578999996654
No 94
>2csv_A Tripartite motif protein 29; ZF-B_BOX domain, TRIM29, ataxia-telangiectasia group D-associated protein, ATDC, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.43.1.1
Probab=81.08 E-value=0.5 Score=28.13 Aligned_cols=18 Identities=22% Similarity=0.525 Sum_probs=16.3
Q ss_pred CCcCcccccccccccCCH
Q psy2696 112 ANCDKRDRNAMYFCSTCA 129 (180)
Q Consensus 112 ~~C~~h~~~~~~~C~~C~ 129 (180)
..|+.|++.+.+||.+|.
T Consensus 19 ~~C~~H~e~l~lfC~~d~ 36 (72)
T 2csv_A 19 RKCPVHGKTMELFCQTDQ 36 (72)
T ss_dssp CBCTTTCCBCCEEESSSC
T ss_pred CcCcccCCceEEEeCCCC
Confidence 679999999999999976
No 95
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=80.77 E-value=0.49 Score=28.11 Aligned_cols=41 Identities=15% Similarity=0.051 Sum_probs=28.5
Q ss_pred CCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCC
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGST 89 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~ 89 (180)
..+.+.+.||+|...+.-- ...+.+.||.|+..++..+|+.
T Consensus 3 ~~LL~iL~CP~ck~~L~~~-----------------~~~~~LiC~~cg~~YPI~dGIP 43 (68)
T 2jr6_A 3 KKFLDILVCPVTKGRLEYH-----------------QDKQELWSRQAKLAYPIKDGIP 43 (68)
T ss_dssp CSSSCCCBCSSSCCBCEEE-----------------TTTTEEEETTTTEEEEEETTEE
T ss_pred hHHhhheECCCCCCcCeEe-----------------CCCCEEEcCCCCcEecCCCCee
Confidence 4567789999999765411 0235567888888888887654
No 96
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=79.89 E-value=5.8 Score=23.13 Aligned_cols=44 Identities=27% Similarity=0.462 Sum_probs=29.9
Q ss_pred ccccccccccCCCceec--cccccchHHhhhcc---ccCCccCCCCCCCCc
Q psy2696 37 PLLCHVCDDYYTEPCLL--SCYHSFCARCLRGR---TVDGKLSCPICGQHT 82 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~~l--~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~~ 82 (180)
.-.|.+|.+--. .++ .|...|...|+... ...+.+.||.|....
T Consensus 12 ~~~C~vC~~~~~--ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 12 GARCGVCGDGTD--VLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TCCCTTTSCCTT--CEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCcCCCCCCCe--EEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 356999986321 222 58889999999643 234678999997643
No 97
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=79.38 E-value=0.39 Score=28.48 Aligned_cols=43 Identities=9% Similarity=-0.071 Sum_probs=29.6
Q ss_pred CCCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCC
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGST 89 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~ 89 (180)
+...+.+.+.||+|...+.-- ...+.+.|+.|+..++..+|+.
T Consensus 3 md~~LLeiL~CP~ck~~L~~~-----------------~~~g~LvC~~c~~~YPI~dGIP 45 (67)
T 2jny_A 3 LDPQLLEVLACPKDKGPLRYL-----------------ESEQLLVNERLNLAYRIDDGIP 45 (67)
T ss_dssp SCGGGTCCCBCTTTCCBCEEE-----------------TTTTEEEETTTTEEEEEETTEE
T ss_pred CCHHHHHHhCCCCCCCcCeEe-----------------CCCCEEEcCCCCccccCCCCEe
Confidence 345677889999999865411 0235667888888888887644
No 98
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=79.32 E-value=11 Score=24.61 Aligned_cols=17 Identities=12% Similarity=0.075 Sum_probs=6.2
Q ss_pred HHHHhHHHHHHHHHHHH
Q psy2696 144 ELQLNCDTEKMTIQSFC 160 (180)
Q Consensus 144 ~l~~~~~~~~~~i~~~~ 160 (180)
++...++...+++...+
T Consensus 72 e~k~KYD~~lqe~ese~ 88 (115)
T 3vem_A 72 EVQAEFRRKFHEVEAEH 88 (115)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 99
>2yrg_A Tripartite motif-containing protein 5; B-box domain, ring finger protein 88, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.98 E-value=0.61 Score=26.65 Aligned_cols=18 Identities=17% Similarity=0.634 Sum_probs=15.8
Q ss_pred CCcCcccccccccccCCH
Q psy2696 112 ANCDKRDRNAMYFCSTCA 129 (180)
Q Consensus 112 ~~C~~h~~~~~~~C~~C~ 129 (180)
..|+.|.+.+++||.++.
T Consensus 15 ~~C~~H~e~L~lfC~~d~ 32 (59)
T 2yrg_A 15 DHCARHGEKLLLFCQEDG 32 (59)
T ss_dssp SBCTTTCCBCCEEETTTC
T ss_pred ccChhhCceeeeecCCCC
Confidence 579999999999999864
No 100
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=77.05 E-value=0.65 Score=27.74 Aligned_cols=41 Identities=17% Similarity=0.303 Sum_probs=28.8
Q ss_pred CCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCC
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGST 89 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~ 89 (180)
..+.+.+.||+|...+.-- ...+.+.||.|+..++..+|+.
T Consensus 3 ~~LL~iL~CP~ck~~L~~~-----------------~~~~~LiC~~cg~~YPI~dGIP 43 (70)
T 2js4_A 3 SRLLDILVCPVCKGRLEFQ-----------------RAQAELVCNADRLAFPVRDGVP 43 (70)
T ss_dssp CCCCCCCBCTTTCCBEEEE-----------------TTTTEEEETTTTEEEEEETTEE
T ss_pred hHHhhheECCCCCCcCEEe-----------------CCCCEEEcCCCCceecCCCCee
Confidence 4567789999998855411 1235677999988888888654
No 101
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=75.99 E-value=6.3 Score=23.62 Aligned_cols=31 Identities=16% Similarity=0.325 Sum_probs=22.0
Q ss_pred CCCCCccccccccccCCC-ceeccccccchHH
Q psy2696 32 CGPKNPLLCHVCDDYYTE-PCLLSCYHSFCAR 62 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~-P~~l~C~H~fC~~ 62 (180)
..-.....|..|.....- +...-|+.+||..
T Consensus 20 ~~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~ 51 (74)
T 1wfp_A 20 PPKSTATRCLSCNKKVGVTGFKCRCGSTFCGT 51 (74)
T ss_dssp CTTCCCCBCSSSCCBCTTTCEECTTSCEECTT
T ss_pred cCcccCccchhhcCcccccceEeccCCEeccc
Confidence 334456789999877653 5566799999864
No 102
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=75.92 E-value=1.8 Score=25.88 Aligned_cols=30 Identities=20% Similarity=0.425 Sum_probs=22.5
Q ss_pred ccccccccccCCCc----eeccccccchHHhhhc
Q psy2696 37 PLLCHVCDDYYTEP----CLLSCYHSFCARCLRG 66 (180)
Q Consensus 37 ~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~ 66 (180)
.-.|.+|...|.-- .--.||..||..|...
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~ 44 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSN 44 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCE
T ss_pred CCcccCCCCccCCccccccCCCCCEEEcccccCC
Confidence 34799999998732 1236999999999764
No 103
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=75.90 E-value=10 Score=23.57 Aligned_cols=52 Identities=23% Similarity=0.446 Sum_probs=33.4
Q ss_pred CCCCccccccccccCCCceec--cccccchHHhhhcc---ccCCccCCCCCCCCcccCC
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLL--SCYHSFCARCLRGR---TVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l--~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~~~~~~ 86 (180)
.......|.+|.+--. .++ .|.-.|...|+..- ...+.+.||.|...-..+.
T Consensus 21 ~d~n~~~C~vC~~~g~--LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~~~ke 77 (88)
T 1fp0_A 21 LDDSATICRVCQKPGD--LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKE 77 (88)
T ss_dssp SSSSSSCCSSSCSSSC--CEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCSSCC
T ss_pred cCCCCCcCcCcCCCCC--EEECCCCCCceecccCCCCCCCCcCCCcCCccccCCCccch
Confidence 3445678999986421 222 47777888888543 2346789999986544433
No 104
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=75.62 E-value=5.4 Score=25.65 Aligned_cols=45 Identities=22% Similarity=0.470 Sum_probs=28.6
Q ss_pred CCccccccccccCCC-ceec--cccccchHHhhhccc---cCCccCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTE-PCLL--SCYHSFCARCLRGRT---VDGKLSCPICG 79 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~-P~~l--~C~H~fC~~Cl~~~~---~~~~~~CP~Cr 79 (180)
.++..|.+|.+.-.. +.+. .|...|...|+.... ....+.||.|.
T Consensus 5 ~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 345678888776442 2222 578888888887642 23567788774
No 105
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=75.46 E-value=7.7 Score=20.98 Aligned_cols=43 Identities=16% Similarity=0.118 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 131 VRTGLMNCRSSLDELQLNCDTEKMTIQSFCQGMIDAITKTQNS 173 (180)
Q Consensus 131 ~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 173 (180)
+++.+..++..++.++..+..-..+....-.+|.+.|...+..
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~~ 45 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQ 45 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5677777888888888888777777777777777777666553
No 106
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=74.60 E-value=0.54 Score=27.95 Aligned_cols=43 Identities=16% Similarity=0.208 Sum_probs=29.3
Q ss_pred CCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCC
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLP 91 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l 91 (180)
..+.+.+.||+|...+.-- ...+.+.||.|+..++..+|+..+
T Consensus 3 ~~LL~iL~CP~ck~~L~~~-----------------~~~~~LiC~~cg~~YPI~dGIPvm 45 (68)
T 2hf1_A 3 AKFLEILVCPLCKGPLVFD-----------------KSKDELICKGDRLAFPIKDGIPMM 45 (68)
T ss_dssp CCCEEECBCTTTCCBCEEE-----------------TTTTEEEETTTTEEEEEETTEECC
T ss_pred hHHhhheECCCCCCcCeEe-----------------CCCCEEEcCCCCcEecCCCCeeee
Confidence 3566788999998755411 023567899999988888865433
No 107
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=74.32 E-value=7.7 Score=23.93 Aligned_cols=29 Identities=24% Similarity=0.409 Sum_probs=22.2
Q ss_pred CCccccccccccCCC--ceeccccccchHHh
Q psy2696 35 KNPLLCHVCDDYYTE--PCLLSCYHSFCARC 63 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~--P~~l~C~H~fC~~C 63 (180)
.....|..|.....- |....|+.+||..=
T Consensus 23 ~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~H 53 (85)
T 1wff_A 23 KIMKHCFLCGKKTGLATSFECRCGNNFCASH 53 (85)
T ss_dssp CCCCBCSSSCCBCSSSSCEECTTCCEECTTT
T ss_pred ccCccchhhCCeecccCCeEcCCCCEecccC
Confidence 345789999887653 77778999999743
No 108
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=74.31 E-value=11 Score=22.46 Aligned_cols=46 Identities=20% Similarity=0.150 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 131 VRTGLMNCRSSLDELQLNCDTEKMTIQSFCQGMIDAITKTQNSMIM 176 (180)
Q Consensus 131 ~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~~~~ll~ 176 (180)
+++++..+...++.++.++..-..+....-.+|.+.|.+.+..+..
T Consensus 5 lEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~~~ 50 (74)
T 3swf_A 5 LEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKP 50 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4666777777777777777777777666666677666666665544
No 109
>2dja_A Midline-2; tripartite motif protein 1, ZF-B_BOX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.43.1.1 PDB: 2dq5_A
Probab=74.29 E-value=1.1 Score=27.37 Aligned_cols=18 Identities=11% Similarity=0.427 Sum_probs=15.9
Q ss_pred CCcCcc-cccccccccCCH
Q psy2696 112 ANCDKR-DRNAMYFCSTCA 129 (180)
Q Consensus 112 ~~C~~h-~~~~~~~C~~C~ 129 (180)
..|+.| ++.+.+||.+|.
T Consensus 19 ~~C~~H~~e~l~lfC~~d~ 37 (84)
T 2dja_A 19 ITCLDHENEKVNMYCVSDD 37 (84)
T ss_dssp CCCSSCSSSCCCEEETTTT
T ss_pred CcCcCcCCccccEEcCCCC
Confidence 579999 689999999976
No 110
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=74.12 E-value=3.3 Score=30.18 Aligned_cols=37 Identities=22% Similarity=0.471 Sum_probs=27.2
Q ss_pred CCCCCCccccccccccCCCc----eeccccccchHHhhhcc
Q psy2696 31 SCGPKNPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGR 67 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~ 67 (180)
...+.+.-.|.+|...|.-- .--.||+.||..|....
T Consensus 155 ~~~W~~~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~ 195 (220)
T 1dvp_A 155 APNWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 195 (220)
T ss_dssp CCCCCCCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred cccCCCCCccCCCCCccCCcccccccCCcCCEEChHHhCCe
Confidence 34566678999999998722 12369999999997653
No 111
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=73.83 E-value=3.9 Score=25.87 Aligned_cols=45 Identities=13% Similarity=0.356 Sum_probs=29.4
Q ss_pred CCccccccccccCCCceec---cccccchHHhhhccc--cCCccCCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLL---SCYHSFCARCLRGRT--VDGKLSCPICGQ 80 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~~--~~~~~~CP~Cr~ 80 (180)
.+.+.| ||.....+-..+ .|..-|...|+.... ....+.||.|+.
T Consensus 26 ~d~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 26 TDVTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp CCBCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CCCEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 445678 898877654444 477777777875431 124689999964
No 112
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=73.22 E-value=4.6 Score=23.09 Aligned_cols=45 Identities=31% Similarity=0.625 Sum_probs=29.9
Q ss_pred CCCccccccccccCCCceec---cccccchHHhhhcc---ccCCccCCCCCCCC
Q psy2696 34 PKNPLLCHVCDDYYTEPCLL---SCYHSFCARCLRGR---TVDGKLSCPICGQH 81 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~ 81 (180)
......|.+|.+.- .++ .|...|...|+... ...+.+.||.|...
T Consensus 6 d~~~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 6 DHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp CSSCSSCTTTCCCS---SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred cCCCCcCCCCCCCC---CEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 34567799998632 223 47778888888743 23467889999654
No 113
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=73.13 E-value=1.6 Score=27.43 Aligned_cols=47 Identities=19% Similarity=0.436 Sum_probs=28.1
Q ss_pred CCCccccccccccCCCceec--ccc---ccchHHhhhcc-ccCCccCCCC-CCCC
Q psy2696 34 PKNPLLCHVCDDYYTEPCLL--SCY---HSFCARCLRGR-TVDGKLSCPI-CGQH 81 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P~~l--~C~---H~fC~~Cl~~~-~~~~~~~CP~-Cr~~ 81 (180)
..+.+.| +|........+. .|. .-|...|+.-. ...+.+.||. |...
T Consensus 23 ~~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~~ 76 (90)
T 2jmi_A 23 NQEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKEI 76 (90)
T ss_dssp -CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHHH
T ss_pred CCCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcch
Confidence 3556788 999865544332 233 45777787532 1235788999 8643
No 114
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=73.08 E-value=1.9 Score=26.36 Aligned_cols=34 Identities=21% Similarity=0.592 Sum_probs=24.9
Q ss_pred CCCccccccccccCCCc----eeccccccchHHhhhcc
Q psy2696 34 PKNPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGR 67 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~ 67 (180)
..+...|.+|...|.-- .--.||..||..|....
T Consensus 16 d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 53 (82)
T 2yw8_A 16 DDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNE 53 (82)
T ss_dssp CCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEE
T ss_pred CccCCcccCcCCcccCccccccCCCCCCEEChHHhCCe
Confidence 34456899999999732 12369999999998753
No 115
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=71.57 E-value=1.6 Score=29.05 Aligned_cols=32 Identities=22% Similarity=0.512 Sum_probs=24.0
Q ss_pred CccccccccccCCCc----eeccccccchHHhhhcc
Q psy2696 36 NPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGR 67 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~ 67 (180)
+...|.+|...|.-- .--.||+.||..|....
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~ 103 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKN 103 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred CCCCCcCcCCccccccccccCCCCCeEEChHHhCCc
Confidence 456899999998732 12369999999997654
No 116
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=70.93 E-value=3.2 Score=30.55 Aligned_cols=38 Identities=18% Similarity=0.360 Sum_probs=27.6
Q ss_pred CCCCCCCccccccccccCCCc----eeccccccchHHhhhcc
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGR 67 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~ 67 (180)
....+.+.-.|.+|...|.-- .-..||..||..|-...
T Consensus 157 ~~p~W~~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~ 198 (226)
T 3zyq_A 157 RAPDWVDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY 198 (226)
T ss_dssp CCCCCCCCSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEE
T ss_pred cccccccCCCCcCcCCCCCccccccccCCCcCEeChhhcCCc
Confidence 344556667999999988722 23369999999997654
No 117
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=69.80 E-value=0.84 Score=27.16 Aligned_cols=43 Identities=14% Similarity=0.196 Sum_probs=29.1
Q ss_pred CCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCCCCCCC
Q psy2696 32 CGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKEGSTLP 91 (180)
Q Consensus 32 ~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~l 91 (180)
..+.+.+.||+|...+.-- ...+.+.||.|+..++..+|+..+
T Consensus 3 ~~LLeiL~CP~ck~~L~~~-----------------~~~~~LiC~~cg~~YPI~dGIPvm 45 (69)
T 2pk7_A 3 TKLLDILACPICKGPLKLS-----------------ADKTELISKGAGLAYPIRDGIPVM 45 (69)
T ss_dssp CCGGGTCCCTTTCCCCEEC-----------------TTSSEEEETTTTEEEEEETTEECC
T ss_pred hHHHhheeCCCCCCcCeEe-----------------CCCCEEEcCCCCcEecCcCCeeee
Confidence 3566788999998765410 023567799999888888865433
No 118
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.35 E-value=2.2 Score=26.15 Aligned_cols=34 Identities=26% Similarity=0.525 Sum_probs=24.6
Q ss_pred CCCccccccccccCCCc----eeccccccchHHhhhcc
Q psy2696 34 PKNPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGR 67 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~ 67 (180)
+.+...|.+|...|.-- .-..||..||..|....
T Consensus 11 d~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 48 (84)
T 1x4u_A 11 TNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFK 48 (84)
T ss_dssp CCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEE
T ss_pred CCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCCc
Confidence 34456899999998632 12369999999997653
No 119
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=69.02 E-value=5.7 Score=22.68 Aligned_cols=44 Identities=30% Similarity=0.715 Sum_probs=29.8
Q ss_pred CCccccccccccCCCceec--cccccchHHhhhcc---ccCCccCCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLL--SCYHSFCARCLRGR---TVDGKLSCPICGQ 80 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l--~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~ 80 (180)
.....|.+|.+. .-.++ .|...|...|+... ...+.+.||.|..
T Consensus 9 ~~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQG--GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCC--SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCCccCCCC--CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 345789999873 22222 47778999999763 2346789999964
No 120
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=68.80 E-value=2.1 Score=24.66 Aligned_cols=47 Identities=19% Similarity=0.537 Sum_probs=29.9
Q ss_pred CCccccccccccCCC-ceec---cccccchHHhhhcccc----CCccCCCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTE-PCLL---SCYHSFCARCLRGRTV----DGKLSCPICGQH 81 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~-P~~l---~C~H~fC~~Cl~~~~~----~~~~~CP~Cr~~ 81 (180)
.+...|++|...+++ -..+ .|..=|...|+.-... ...+.||.|+..
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 467889999998853 2233 4666666777654311 256788888653
No 121
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=68.48 E-value=5 Score=24.30 Aligned_cols=33 Identities=21% Similarity=0.497 Sum_probs=23.4
Q ss_pred cccccc--ccccCC-----Cceec------cccccchHHhhhcccc
Q psy2696 37 PLLCHV--CDDYYT-----EPCLL------SCYHSFCARCLRGRTV 69 (180)
Q Consensus 37 ~l~C~i--C~~~~~-----~P~~l------~C~H~fC~~Cl~~~~~ 69 (180)
...||- |..... .++.- .|++.||..|...|..
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~wH~ 70 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHE 70 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEECCS
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCccccC
Confidence 677886 766553 23444 5999999999998743
No 122
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=67.71 E-value=4.7 Score=27.47 Aligned_cols=42 Identities=24% Similarity=0.611 Sum_probs=27.7
Q ss_pred CccccccccccCCCceec---cccccchHHhhhccc----------cCCccCCCCCCC
Q psy2696 36 NPLLCHVCDDYYTEPCLL---SCYHSFCARCLRGRT----------VDGKLSCPICGQ 80 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~~----------~~~~~~CP~Cr~ 80 (180)
.+..|.+|.+-=. .+ .|-..||..||.... ..+.+.||.|..
T Consensus 62 ~~d~C~vC~~GG~---LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAEGGN---LICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCCCSS---EEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCeecccCCCCc---EEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 3456666655222 22 588899999998532 347889999964
No 123
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=67.25 E-value=1.3 Score=27.62 Aligned_cols=50 Identities=16% Similarity=0.349 Sum_probs=34.3
Q ss_pred CCccccccccccCC---Cceec--cccccchHHhhhcc-------ccCCccCCCCCCCCccc
Q psy2696 35 KNPLLCHVCDDYYT---EPCLL--SCYHSFCARCLRGR-------TVDGKLSCPICGQHTLL 84 (180)
Q Consensus 35 ~~~l~C~iC~~~~~---~P~~l--~C~H~fC~~Cl~~~-------~~~~~~~CP~Cr~~~~~ 84 (180)
++...|.+|...-. +..++ .|...|...|+... ...+.+.|+.|......
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~ 75 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKR 75 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCC
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhh
Confidence 34678999988654 34444 58888888888753 13467899999765543
No 124
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=67.09 E-value=3.2 Score=25.77 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=23.9
Q ss_pred CccccccccccCCCc----eeccccccchHHhhhcc
Q psy2696 36 NPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGR 67 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~ 67 (180)
+...|.+|...|.-- .-..||..||..|....
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 43 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFS 43 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEE
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhHcCCc
Confidence 446899999988732 12369999999998753
No 125
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=66.14 E-value=1.1 Score=31.09 Aligned_cols=47 Identities=21% Similarity=0.442 Sum_probs=33.5
Q ss_pred CccccccccccCC---Cc-e-eccccccchHHhhhccccCCccCCCCCCCCc
Q psy2696 36 NPLLCHVCDDYYT---EP-C-LLSCYHSFCARCLRGRTVDGKLSCPICGQHT 82 (180)
Q Consensus 36 ~~l~C~iC~~~~~---~P-~-~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~ 82 (180)
..-.|.+|...|. ++ . -..|.|.+|.+|-........+.|-.|+..-
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~~~~~W~C~vC~k~r 118 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHPEEQGWLCDPCHLAR 118 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCSSSSSCEEHHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccccccCCCCcEeeHHHHHHH
Confidence 4689999999874 33 2 2369999999997443455677888886653
No 126
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=65.95 E-value=21 Score=26.21 Aligned_cols=46 Identities=9% Similarity=0.244 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 133 TGLMNCRSSLDELQLNCDTEKMTIQSFCQGMIDAITKTQNSMIMEV 178 (180)
Q Consensus 133 ~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~~~~ll~~l 178 (180)
+.++.++..++.+..++.++..++...+.++.+-+-+++.++++.|
T Consensus 33 ~~L~~iQ~e~~~l~~e~~~ev~~lE~ky~~~~~Ply~kR~eII~~I 78 (225)
T 2e50_A 33 EHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKI 78 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcc
Confidence 4456677788888889999999999999999998888888887543
No 127
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=65.66 E-value=3.1 Score=24.36 Aligned_cols=34 Identities=26% Similarity=0.674 Sum_probs=25.3
Q ss_pred CCCCccccccccccCCCceeccc-cccchHHhhhcc
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLLSC-YHSFCARCLRGR 67 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l~C-~H~fC~~Cl~~~ 67 (180)
..++.-.|-||.+. ..-+-+.| +..||..|....
T Consensus 4 ~~ee~pWC~ICneD-AtlrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 4 GSSGLPWCCICNED-ATLRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp SCCCCSSCTTTCSC-CCEEETTTTSEEECSSHHHHH
T ss_pred cCcCCCeeEEeCCC-CeEEecCCCCceehHHHHHHH
Confidence 44567789999986 23345578 789999998775
No 128
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=65.44 E-value=2.8 Score=27.74 Aligned_cols=45 Identities=22% Similarity=0.582 Sum_probs=29.0
Q ss_pred CccccccccccCCCc----eeccccccchHHhhhccccCCccCCCCCCCC
Q psy2696 36 NPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGRTVDGKLSCPICGQH 81 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~ 81 (180)
+...|..|...|.-. .-..||..||..|...... ...+|-.|...
T Consensus 18 ~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~-~vRVC~~C~~~ 66 (120)
T 1y02_A 18 LEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGN-GPRLCLLCQRF 66 (120)
T ss_dssp --CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC-----CCEEHHHHHH
T ss_pred ccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCC-CceECHHHHHH
Confidence 346899999999732 2337999999999876422 24457767543
No 129
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.93 E-value=2.7 Score=26.38 Aligned_cols=49 Identities=24% Similarity=0.478 Sum_probs=31.0
Q ss_pred CCCCccccccccccCCCceec---cccccchHHhhhcc---ccCCccCCCCCCCC
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLL---SCYHSFCARCLRGR---TVDGKLSCPICGQH 81 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~ 81 (180)
...+...|.+|...-..-.+| .|...|...|+... ...+.+.||.|...
T Consensus 12 ~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 12 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred hccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 444567899998765422233 47777777787632 23457889988653
No 130
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=64.62 E-value=1.8 Score=25.09 Aligned_cols=46 Identities=20% Similarity=0.537 Sum_probs=30.2
Q ss_pred CccccccccccCC---Cceec--cccccchHHhhhccc------cCCccCCCCCCCC
Q psy2696 36 NPLLCHVCDDYYT---EPCLL--SCYHSFCARCLRGRT------VDGKLSCPICGQH 81 (180)
Q Consensus 36 ~~l~C~iC~~~~~---~P~~l--~C~H~fC~~Cl~~~~------~~~~~~CP~Cr~~ 81 (180)
+...|.+|..... +..++ .|...|...|+.... ..+.+.||.|...
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 4578999987653 22222 577788888887531 3467888888554
No 131
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=64.20 E-value=5.5 Score=24.66 Aligned_cols=51 Identities=20% Similarity=0.375 Sum_probs=33.9
Q ss_pred CCCCccccccccccC--CCceec---cccccchHHhhhcc-ccCCccCCCCCCCCcc
Q psy2696 33 GPKNPLLCHVCDDYY--TEPCLL---SCYHSFCARCLRGR-TVDGKLSCPICGQHTL 83 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~--~~P~~l---~C~H~fC~~Cl~~~-~~~~~~~CP~Cr~~~~ 83 (180)
...+...|.+|...- ..-.+| .|.-.|...|+... ...+.+.||.|.....
T Consensus 21 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 21 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTT
T ss_pred cCCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccc
Confidence 345678899999764 222333 57778888898743 3446788999966543
No 132
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=64.16 E-value=5.8 Score=24.62 Aligned_cols=33 Identities=21% Similarity=0.480 Sum_probs=24.4
Q ss_pred CCccccccccccCCCc----eeccccccchHHhhhcc
Q psy2696 35 KNPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGR 67 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~ 67 (180)
.+...|.+|...|.-- .-..||+.||..|....
T Consensus 18 ~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~ 54 (90)
T 3t7l_A 18 SEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRK 54 (90)
T ss_dssp GGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred ccCCcCcCCCCcccchhhCccccCCCCEECCcccCCe
Confidence 3456799999988621 22369999999998764
No 133
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=63.96 E-value=6.8 Score=25.20 Aligned_cols=31 Identities=16% Similarity=0.303 Sum_probs=20.0
Q ss_pred CceeccccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 49 EPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 49 ~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
.|+-..||+.| .. .......||.|+......
T Consensus 67 p~~C~~CG~~F----~~--~~~kPsrCP~CkSe~Ie~ 97 (105)
T 2gmg_A 67 PAQCRKCGFVF----KA--EINIPSRCPKCKSEWIEE 97 (105)
T ss_dssp CCBBTTTCCBC----CC--CSSCCSSCSSSCCCCBCC
T ss_pred CcChhhCcCee----cc--cCCCCCCCcCCCCCccCC
Confidence 45566899999 12 233456899998865433
No 134
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=63.31 E-value=2.5 Score=23.94 Aligned_cols=41 Identities=27% Similarity=0.524 Sum_probs=27.1
Q ss_pred CCCCCCCccccccccccCCCceeccccccchHHhhhccccCCccCCC--CCCCCcccCCCCC
Q psy2696 30 TSCGPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCP--ICGQHTLLKEGST 89 (180)
Q Consensus 30 ~~~~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP--~Cr~~~~~~~~~~ 89 (180)
+...+.+.+.||+|...+..- .+.+.|+ .|+..++..+|+.
T Consensus 3 ~d~~lL~iL~CP~c~~~L~~~-------------------~~~L~C~~~~c~~~YPI~dGIP 45 (56)
T 2kpi_A 3 LEAGLLEILACPACHAPLEER-------------------DAELICTGQDCGLAYPVRDGIP 45 (56)
T ss_dssp CCCSCTTSCCCSSSCSCEEEE-------------------TTEEEECSSSCCCEEEEETTEE
T ss_pred CCHHHHhheeCCCCCCcceec-------------------CCEEEcCCcCCCcEEeeECCEe
Confidence 445678889999998865411 1345677 7777777776543
No 135
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=63.07 E-value=29 Score=29.33 Aligned_cols=40 Identities=5% Similarity=0.113 Sum_probs=30.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2696 140 SSLDELQLNCDTEKMTIQSFCQGMIDAITKTQNSMIMEVQ 179 (180)
Q Consensus 140 ~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~~~~ll~~le 179 (180)
+...+++..++...+..++.+.+|.+.+++.+..++++.|
T Consensus 508 ~~~~~~~~~~~~~~~~~~e~~~ql~~kme~~~~~~~~e~~ 547 (592)
T 1f5n_A 508 EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQE 547 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566666777777788888888888888888888776
No 136
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=63.01 E-value=3.3 Score=24.74 Aligned_cols=46 Identities=22% Similarity=0.522 Sum_probs=29.6
Q ss_pred CCccccccccccCCCceec---cccccchHHhhhccc--------cCCccCCCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLL---SCYHSFCARCLRGRT--------VDGKLSCPICGQH 81 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~~--------~~~~~~CP~Cr~~ 81 (180)
.+.+.| +|...+..-..+ .|..=|...|+.-.. ....+.||.|+..
T Consensus 14 ~~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 14 PNALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp TTCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 346788 899988743333 466677778875331 2357889988654
No 137
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=62.43 E-value=1.5 Score=26.94 Aligned_cols=39 Identities=23% Similarity=0.604 Sum_probs=22.2
Q ss_pred cccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCc
Q psy2696 38 LLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHT 82 (180)
Q Consensus 38 l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~ 82 (180)
+.||.|...+..- =++.+|..|-..+.... .||.|...+
T Consensus 3 ~~CP~C~~~l~~~----~~~~~C~~C~~~~~~~a--fCPeCgq~L 41 (81)
T 2jrp_A 3 ITCPVCHHALERN----GDTAHCETCAKDFSLQA--LCPDCRQPL 41 (81)
T ss_dssp CCCSSSCSCCEEC----SSEEECTTTCCEEEEEE--ECSSSCSCC
T ss_pred CCCCCCCCccccC----CCceECccccccCCCcc--cCcchhhHH
Confidence 6788888766411 11344666655543222 588886654
No 138
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=62.37 E-value=20 Score=21.43 Aligned_cols=27 Identities=19% Similarity=0.379 Sum_probs=19.9
Q ss_pred CccccccccccCC-CceeccccccchHH
Q psy2696 36 NPLLCHVCDDYYT-EPCLLSCYHSFCAR 62 (180)
Q Consensus 36 ~~l~C~iC~~~~~-~P~~l~C~H~fC~~ 62 (180)
....|..|...+. .+....|+.+||..
T Consensus 24 ~~nRC~~CrKkvgL~gf~CrCg~~FCs~ 51 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCRCGNLFCGL 51 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECTTSCEECSS
T ss_pred cCCcChhhCCcccccCeecCCCCEechh
Confidence 3568999988643 45666799999863
No 139
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=62.21 E-value=2.2 Score=24.50 Aligned_cols=31 Identities=23% Similarity=0.456 Sum_probs=21.5
Q ss_pred cccccccccCCC-----ceecc---ccccchHHhhhccc
Q psy2696 38 LLCHVCDDYYTE-----PCLLS---CYHSFCARCLRGRT 68 (180)
Q Consensus 38 l~C~iC~~~~~~-----P~~l~---C~H~fC~~Cl~~~~ 68 (180)
-.||-|.-.... -++.. |++.||-.|...|.
T Consensus 7 k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~~ 45 (60)
T 1wd2_A 7 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWE 45 (60)
T ss_dssp CCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSG
T ss_pred eECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCcc
Confidence 468888777752 23333 88889988888764
No 140
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=62.01 E-value=1.3 Score=28.03 Aligned_cols=41 Identities=27% Similarity=0.436 Sum_probs=26.8
Q ss_pred ccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 37 PLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
.+.||+|+..+.. .=++.+|..|-..+. ....||.|...+.
T Consensus 32 ~~~CP~Cq~eL~~----~g~~~hC~~C~~~f~--~~a~CPdC~q~Le 72 (101)
T 2jne_A 32 ELHCPQCQHVLDQ----DNGHARCRSCGEFIE--MKALCPDCHQPLQ 72 (101)
T ss_dssp CCBCSSSCSBEEE----ETTEEEETTTCCEEE--EEEECTTTCSBCE
T ss_pred cccCccCCCccee----cCCEEECccccchhh--ccccCcchhhHHH
Confidence 3899999987652 123445877866542 2346999987664
No 141
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=61.46 E-value=3.2 Score=29.56 Aligned_cols=45 Identities=18% Similarity=0.507 Sum_probs=30.7
Q ss_pred cccccccccCCCce----ec---cccccchHHhhhccc----------cCCccCCCCCCCCc
Q psy2696 38 LLCHVCDDYYTEPC----LL---SCYHSFCARCLRGRT----------VDGKLSCPICGQHT 82 (180)
Q Consensus 38 l~C~iC~~~~~~P~----~l---~C~H~fC~~Cl~~~~----------~~~~~~CP~Cr~~~ 82 (180)
..||+|...|++.- .+ .|..-|...|+.-.. ....+.||.|+...
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 57999999998542 33 377777778875321 01268999998754
No 142
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.37 E-value=2.7 Score=23.54 Aligned_cols=44 Identities=25% Similarity=0.586 Sum_probs=26.4
Q ss_pred CCCccccccccccCCCceec--cccccchHHhhhcc---ccCCccCCCCCC
Q psy2696 34 PKNPLLCHVCDDYYTEPCLL--SCYHSFCARCLRGR---TVDGKLSCPICG 79 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P~~l--~C~H~fC~~Cl~~~---~~~~~~~CP~Cr 79 (180)
......|.+|.+.- ..++ .|...|...|+... ...+.+.||.|.
T Consensus 6 ~~~~~~C~vC~~~g--~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 6 SGHEDFCSVCRKSG--QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp CSSCCSCSSSCCSS--CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCCCCCCccCCCCC--eEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 34456788888742 2222 47777777887642 223567787774
No 143
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=60.17 E-value=7.2 Score=34.12 Aligned_cols=73 Identities=18% Similarity=0.378 Sum_probs=46.1
Q ss_pred CCccccccccccCCCce-------ecc---cccc--------------------chHHhhhcc-------ccCCccCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPC-------LLS---CYHS--------------------FCARCLRGR-------TVDGKLSCPI 77 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~-------~l~---C~H~--------------------fC~~Cl~~~-------~~~~~~~CP~ 77 (180)
-+.-+|+-|...+.||. ++. ||.- .|..|..++ ...+.+.||.
T Consensus 104 pD~a~C~~Cl~e~~dp~~rry~ypF~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~dRRfhAqp~aC~~ 183 (772)
T 4g9i_A 104 PDIAICDDCLRELFDPTNKRYMYPFIVCTNCGPRFTIIEDLPYDRENTTMKEFPMCDFCRSEYEDPLNRRYHAEPTACPV 183 (772)
T ss_dssp CCCCCCHHHHHHHSSTTSTTTTCTTCCCTTSSCCGGGCCSSSCCGGGSGGGGSCCCHHHHHHHHCSSSTTTTCTTCCCTT
T ss_pred CchhhhHHHHHHhcCCCCCccCCccccCCCCCchhhhhhcCCCCCCCCcCCCCCCChhHHHHhCCCCCCCCcCCCCCCcc
Confidence 45678888888877652 223 4443 399998876 2346789999
Q ss_pred CCCCcccCC-CCCCCCChHHHHHHHHHHhcCC
Q psy2696 78 CGQHTLLKE-GSTLPPPDNVLKQLIEVANAEN 108 (180)
Q Consensus 78 Cr~~~~~~~-~~~~l~~n~~l~~l~~~~~~~~ 108 (180)
|.-.+.+.+ .+... ....+...++.++...
T Consensus 184 CGP~l~l~~~~~~~~-~~~~i~~a~~~l~~G~ 214 (772)
T 4g9i_A 184 CGPSYRLYTSDGQEI-YGDPLRKAAELIDKGY 214 (772)
T ss_dssp TSCCEEEESSSCBCC-TTHHHHHHHHHHTTSC
T ss_pred CCceEEEEcCCCCee-chHHHHHHHHHHHcCC
Confidence 999887655 22222 2345566666666543
No 144
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=59.98 E-value=6.7 Score=23.10 Aligned_cols=42 Identities=26% Similarity=0.582 Sum_probs=26.5
Q ss_pred ccccccccCCCceec---cccccchHHhhhcc---ccCC-ccCCCCCCC
Q psy2696 39 LCHVCDDYYTEPCLL---SCYHSFCARCLRGR---TVDG-KLSCPICGQ 80 (180)
Q Consensus 39 ~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~---~~~~-~~~CP~Cr~ 80 (180)
.|.+|...-..-.+| .|...|...|+... ...+ .+.||.|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 456777543333333 47778888898743 1234 789999965
No 145
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=59.70 E-value=6.6 Score=23.26 Aligned_cols=48 Identities=21% Similarity=0.395 Sum_probs=31.6
Q ss_pred CCCCccccccccccC--C-Cceec--cccccchHHhhhcc-ccCCccCCCCCCC
Q psy2696 33 GPKNPLLCHVCDDYY--T-EPCLL--SCYHSFCARCLRGR-TVDGKLSCPICGQ 80 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~--~-~P~~l--~C~H~fC~~Cl~~~-~~~~~~~CP~Cr~ 80 (180)
...+...|.+|.+.- . +..++ .|.-.|...|+... ...+.+.||.|..
T Consensus 12 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 345567899998764 2 23333 58778888888643 2346788888854
No 146
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=58.25 E-value=11 Score=21.48 Aligned_cols=39 Identities=28% Similarity=0.619 Sum_probs=26.5
Q ss_pred ccccccccCCCcee--c-cccccchHHhhhccccCCccCCCCC
Q psy2696 39 LCHVCDDYYTEPCL--L-SCYHSFCARCLRGRTVDGKLSCPIC 78 (180)
Q Consensus 39 ~C~iC~~~~~~P~~--l-~C~H~fC~~Cl~~~~~~~~~~CP~C 78 (180)
.|--|+..|.+... - .|++.||.+|=.-. ...--.||.|
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fi-He~Lh~CPgC 58 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCVDCDVFV-HDSLHSCPGC 58 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCHHHHHTT-TTTSCSSSTT
T ss_pred cccccCcccCCCccEECCccCcCcccchhHHH-HhhccCCcCC
Confidence 48889998865432 2 59999999994322 3333468887
No 147
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=57.68 E-value=5.5 Score=28.74 Aligned_cols=46 Identities=26% Similarity=0.446 Sum_probs=30.7
Q ss_pred CCccccccccccCCCceec---cccccchHHhhhcc---ccCCccCCCCCCCCcc
Q psy2696 35 KNPLLCHVCDDYYTEPCLL---SCYHSFCARCLRGR---TVDGKLSCPICGQHTL 83 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~~~ 83 (180)
...-.|.+|.+-- .++ .|...|...|+... ...+.+.||.|+....
T Consensus 5 ~~~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 5 PNEDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SSCSSBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 3456699998532 233 47778888898643 2346789999987543
No 148
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=55.34 E-value=11 Score=26.54 Aligned_cols=45 Identities=22% Similarity=0.430 Sum_probs=28.9
Q ss_pred ccccccccccCCCceec--cccccchHHhhhcc---ccCCccCCCCCCCCcc
Q psy2696 37 PLLCHVCDDYYTEPCLL--SCYHSFCARCLRGR---TVDGKLSCPICGQHTL 83 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~~l--~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~~~ 83 (180)
.-.|.+|.+--. .++ .|...|...|+... ...+.+.||.|+....
T Consensus 4 ~~~C~~C~~~g~--ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 4 EDWCAVCQNGGE--LLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp CSSCTTTCCCSS--CEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCccccCCCCCe--eeecCCCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 356888875422 111 47778888888543 2346789999987653
No 149
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.76 E-value=8.8 Score=23.09 Aligned_cols=42 Identities=24% Similarity=0.539 Sum_probs=27.4
Q ss_pred ccccccccCCCceec---cccccchHHhhhcc---ccCC-ccCCCCCCC
Q psy2696 39 LCHVCDDYYTEPCLL---SCYHSFCARCLRGR---TVDG-KLSCPICGQ 80 (180)
Q Consensus 39 ~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~---~~~~-~~~CP~Cr~ 80 (180)
.|.+|...-..-.+| .|...|...|+... ...+ .+.||.|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 778888653333333 57778888888743 1234 788999864
No 150
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=51.92 E-value=12 Score=24.13 Aligned_cols=26 Identities=27% Similarity=0.625 Sum_probs=14.6
Q ss_pred ccccchHHhhhcc---ccCCccCCCCCCC
Q psy2696 55 CYHSFCARCLRGR---TVDGKLSCPICGQ 80 (180)
Q Consensus 55 C~H~fC~~Cl~~~---~~~~~~~CP~Cr~ 80 (180)
|...|...|+... ...+.+.||.|+.
T Consensus 83 C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 83 CDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp TCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred CCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 5566666666432 1234567777753
No 151
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=51.38 E-value=34 Score=25.13 Aligned_cols=43 Identities=26% Similarity=0.547 Sum_probs=24.6
Q ss_pred cccccccccCCCceec---cccccchHHhhhccc---cCC-ccCCCCCCC
Q psy2696 38 LLCHVCDDYYTEPCLL---SCYHSFCARCLRGRT---VDG-KLSCPICGQ 80 (180)
Q Consensus 38 l~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~~---~~~-~~~CP~Cr~ 80 (180)
-.|.+|...-..-.+| .|...|...|+.... ..+ .+.||.|..
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 3688887643322233 477778888887431 234 788999965
No 152
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=51.07 E-value=21 Score=21.65 Aligned_cols=17 Identities=24% Similarity=0.763 Sum_probs=13.2
Q ss_pred CCCccccccccccCCCc
Q psy2696 34 PKNPLLCHVCDDYYTEP 50 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P 50 (180)
-...+.|++|...|...
T Consensus 14 ~~~~~~C~~C~~~f~~~ 30 (106)
T 2ee8_A 14 TKKEFICKFCGRHFTKS 30 (106)
T ss_dssp CCCCCBCSSSCCBCSSH
T ss_pred CCcCeECCCCCCccCCH
Confidence 34568999999999754
No 153
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=50.88 E-value=3.2 Score=33.24 Aligned_cols=34 Identities=18% Similarity=0.510 Sum_probs=0.0
Q ss_pred CCCccccccccccCCCc----eeccccccchHHhhhcc
Q psy2696 34 PKNPLLCHVCDDYYTEP----CLLSCYHSFCARCLRGR 67 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P----~~l~C~H~fC~~Cl~~~ 67 (180)
..+.-.|..|...|.-- .-..||+.||..|-...
T Consensus 372 ~~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~ 409 (434)
T 3mpx_A 372 VTHVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNK 409 (434)
T ss_dssp --------------------------------------
T ss_pred cccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCe
Confidence 34467899999988622 22369999999997653
No 154
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=50.54 E-value=12 Score=24.97 Aligned_cols=45 Identities=22% Similarity=0.530 Sum_probs=27.1
Q ss_pred CccccccccccCCCceeccccccchHHhhhcc---------c-cCCccCCCCCCC
Q psy2696 36 NPLLCHVCDDYYTEPCLLSCYHSFCARCLRGR---------T-VDGKLSCPICGQ 80 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~---------~-~~~~~~CP~Cr~ 80 (180)
.+..|.+|.+-=.-.--=.|-..||..||... . ..+.+.|+.|..
T Consensus 56 ~~~~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 56 MDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CBSSCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCcCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 34456666542110000157789999999853 1 357799999944
No 155
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=50.08 E-value=1e+02 Score=25.11 Aligned_cols=20 Identities=25% Similarity=0.602 Sum_probs=14.6
Q ss_pred CCCCcCcccccccccccC-CH
Q psy2696 110 PCANCDKRDRNAMYFCST-CA 129 (180)
Q Consensus 110 ~c~~C~~h~~~~~~~C~~-C~ 129 (180)
.-..|-.-.+..-.||.| |.
T Consensus 61 d~g~c~~~~~~fG~yCPTtCg 81 (461)
T 3ghg_B 61 DAGGCLHADPDLGVLCPTGCQ 81 (461)
T ss_dssp CCCCCBCSSTTTCBCEECHHH
T ss_pred CCCCccccCcccCCcCCCcch
Confidence 345666667778899987 87
No 156
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=49.72 E-value=73 Score=25.09 Aligned_cols=44 Identities=7% Similarity=0.115 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 133 TGLMNCRSSLDELQLNCDTEKMTIQSFCQGMIDAITKTQNSMIM 176 (180)
Q Consensus 133 ~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~~~~ll~ 176 (180)
++++.++..+..+..++.++...++..+.++.+-+-+++.+++.
T Consensus 56 ~aLk~lQ~E~~~le~ef~eEv~~LE~KY~kl~qPLyeKR~eII~ 99 (359)
T 3fs3_A 56 KKLKLYQKEYYDYESKFEYELFLLRQKYHDLYGPIYDKRREALV 99 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHc
Confidence 44667778888999999999999999999999999888888886
No 157
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=49.15 E-value=40 Score=20.02 Aligned_cols=47 Identities=21% Similarity=0.511 Sum_probs=29.9
Q ss_pred CCccccccccccCC-Cceec---cccccchHHhhhccc----cCCccCCCCCCCCc
Q psy2696 35 KNPLLCHVCDDYYT-EPCLL---SCYHSFCARCLRGRT----VDGKLSCPICGQHT 82 (180)
Q Consensus 35 ~~~l~C~iC~~~~~-~P~~l---~C~H~fC~~Cl~~~~----~~~~~~CP~Cr~~~ 82 (180)
.+.+.| +|...++ +-..+ .|..=|...|+.-.. ....+.||.|+...
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 445777 8988875 22233 366666777775331 13578999998754
No 158
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=48.56 E-value=5.5 Score=23.35 Aligned_cols=47 Identities=17% Similarity=0.395 Sum_probs=27.5
Q ss_pred CCCCccccccccccCCCceecc---ccccchHHhhhccc--cCCccCCCCCCC
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLLS---CYHSFCARCLRGRT--VDGKLSCPICGQ 80 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l~---C~H~fC~~Cl~~~~--~~~~~~CP~Cr~ 80 (180)
...+.+.| +|...+..-..+. |..=|...|+.-.. ....+.||.|+.
T Consensus 15 ~~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 15 YFQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TTTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCCCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 34557788 9988776533443 55555566664321 124577777753
No 159
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=48.11 E-value=26 Score=20.30 Aligned_cols=26 Identities=19% Similarity=0.437 Sum_probs=19.2
Q ss_pred ccccccccccCCC-ceeccccccchHH
Q psy2696 37 PLLCHVCDDYYTE-PCLLSCYHSFCAR 62 (180)
Q Consensus 37 ~l~C~iC~~~~~~-P~~l~C~H~fC~~ 62 (180)
...|..|...+.- +...-|+.+||..
T Consensus 15 ~~rC~~C~kkvgl~~f~CrCg~~FC~~ 41 (64)
T 1wg2_A 15 NNRCFSCNKKVGVMGFKCKCGSTFCGS 41 (64)
T ss_dssp SCSCTTTCCCCTTSCEECTTSCEECSS
T ss_pred CCcChhhCCcccccCeEeecCCEeccc
Confidence 4689999886553 4555799999864
No 160
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=47.90 E-value=6.2 Score=30.52 Aligned_cols=46 Identities=15% Similarity=0.330 Sum_probs=31.7
Q ss_pred CCccccccccccCCCceecc----cc--ccchHHhhhccccCCccCCCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLLS----CY--HSFCARCLRGRTVDGKLSCPICGQH 81 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l~----C~--H~fC~~Cl~~~~~~~~~~CP~Cr~~ 81 (180)
...-.||+|+....--++.. =| +.+|.-|-..|.. ....||.|...
T Consensus 180 ~~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~-~R~~C~~Cg~~ 231 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHY-VRIKCSHCEES 231 (309)
T ss_dssp TTCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEEC-CTTSCSSSCCC
T ss_pred ccCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEee-cCcCCcCCCCC
Confidence 55789999999665333221 22 5778888887743 46689999886
No 161
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=47.40 E-value=13 Score=26.48 Aligned_cols=42 Identities=24% Similarity=0.524 Sum_probs=26.2
Q ss_pred ccccccccCCCceec---cccccchHHhhhcc---ccCCccCCCCCCCCcc
Q psy2696 39 LCHVCDDYYTEPCLL---SCYHSFCARCLRGR---TVDGKLSCPICGQHTL 83 (180)
Q Consensus 39 ~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~~~ 83 (180)
.|.+|.+--. .+ .|...|...|+..- ...+.+.||.|.....
T Consensus 4 ~C~~C~~~g~---ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 4 ICRVCQKPGD---LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp CBTTTCCCSS---CCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSCC
T ss_pred cCccCCCCCc---eeECCCCCchhccccCCCCcccCCCCCCCCcCccCCCC
Confidence 5777775322 22 46667778888532 2346788999986543
No 162
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=46.96 E-value=44 Score=19.98 Aligned_cols=42 Identities=14% Similarity=0.305 Sum_probs=25.2
Q ss_pred CCCCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 33 GPKNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 33 ~l~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
.....-.|..|.+......+..-+..|...| +.|-.|...+.
T Consensus 21 ~~~~~~~C~~C~~~I~~~~~~a~~~~~H~~C---------F~C~~C~~~L~ 62 (89)
T 1x64_A 21 SAQRMPLCDKCGSGIVGAVVKARDKYRHPEC---------FVCADCNLNLK 62 (89)
T ss_dssp CCCSCCBCTTTCCBCCSCCEESSSCEECTTT---------CCCSSSCCCTT
T ss_pred CCCcCCCcccCCCEecccEEEECCceECccC---------CEecCCCCCCC
Confidence 3445678999998777544334444444333 45777876654
No 163
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=44.69 E-value=5.6 Score=22.61 Aligned_cols=45 Identities=29% Similarity=0.579 Sum_probs=27.5
Q ss_pred CCccccccccccCCCceec--c--cc-ccchHHhhhccc-cCCccCCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLL--S--CY-HSFCARCLRGRT-VDGKLSCPICGQ 80 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l--~--C~-H~fC~~Cl~~~~-~~~~~~CP~Cr~ 80 (180)
.+...| +|.+......+. . |. .-|...|+.-.. ..+.+.||.|+.
T Consensus 7 ~e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 7 NEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccC
Confidence 356777 898876543322 3 55 467788886321 235788988854
No 164
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=44.67 E-value=9.5 Score=21.52 Aligned_cols=44 Identities=25% Similarity=0.607 Sum_probs=26.9
Q ss_pred CccccccccccCCCceec--cccccchHHhhhcc---ccCCccCCCCCCCC
Q psy2696 36 NPLLCHVCDDYYTEPCLL--SCYHSFCARCLRGR---TVDGKLSCPICGQH 81 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~~l--~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~ 81 (180)
....|.+|.+.- ..++ .|...|...|+... ...+.+.||.|...
T Consensus 4 ~~~~C~vC~~~g--~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 4 HEDFCSVCRKSG--QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCSSCTTTCCCS--SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCcCCCCCC--cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 456788887631 1222 47778888888742 22356778887543
No 165
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=43.49 E-value=6.9 Score=18.20 Aligned_cols=15 Identities=27% Similarity=0.744 Sum_probs=9.8
Q ss_pred ccCCCCCCCCcccCC
Q psy2696 72 KLSCPICGQHTLLKE 86 (180)
Q Consensus 72 ~~~CP~Cr~~~~~~~ 86 (180)
.+.||+|....+..+
T Consensus 6 ~vqcpvcqq~mpaah 20 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAH 20 (29)
T ss_dssp EEECTTTCCEEEGGG
T ss_pred eeeChHHHHhCcHHH
Confidence 456899977655433
No 166
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=43.34 E-value=14 Score=32.36 Aligned_cols=71 Identities=17% Similarity=0.375 Sum_probs=43.9
Q ss_pred CCccccccccccCCCce-------ecc---ccc--------------------cchHHhhhccc-------cCCccCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPC-------LLS---CYH--------------------SFCARCLRGRT-------VDGKLSCPI 77 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~-------~l~---C~H--------------------~fC~~Cl~~~~-------~~~~~~CP~ 77 (180)
-+.-+|+-|+..+.||. ++. ||. ..|..|..++. ..+...||.
T Consensus 109 pD~a~C~~Cl~e~~dp~~Rry~ypF~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~~RRfhAqp~aC~~ 188 (761)
T 3vth_A 109 PDMGVCEDCLRELKDPKDRRYRYPFINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPHDRRFHAQPVACFD 188 (761)
T ss_dssp CCBCCCHHHHHHHTCTTSTTTTCTTCCBTTBBCSGGGBCSSSCCGGGBGGGGSCCCHHHHHHHTCTTSTTTTCTTCCCTT
T ss_pred CCccccHHHHHHhcCCCccccCCCcccCCCCCcchhhhccCCCCCCCCccccCCCCHHHHHHhcCcccccccCCCCcCCc
Confidence 34578888887776652 223 443 24999998872 346789999
Q ss_pred CCCCcccCCCCCCCCChHHHHHHHHHHhcCC
Q psy2696 78 CGQHTLLKEGSTLPPPDNVLKQLIEVANAEN 108 (180)
Q Consensus 78 Cr~~~~~~~~~~~l~~n~~l~~l~~~~~~~~ 108 (180)
|.-.+.+.+... ....+...++.+++..
T Consensus 189 CGP~l~l~~~~~---~~~~i~~aa~~L~~G~ 216 (761)
T 3vth_A 189 CGPSLSFVGEGC---FDDEIKCVAKALKEGK 216 (761)
T ss_dssp TSCCEEEESSCC---CSCHHHHHHHHHHTTC
T ss_pred cCCeeEEeCCCC---chHHHHHHHHHHHcCC
Confidence 998876644110 2234556666666554
No 167
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=43.15 E-value=21 Score=21.23 Aligned_cols=46 Identities=17% Similarity=0.394 Sum_probs=29.2
Q ss_pred CCccccccccccCCCceec-----cccccchHHhhhcccc--------CCccCCCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLL-----SCYHSFCARCLRGRTV--------DGKLSCPICGQH 81 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l-----~C~H~fC~~Cl~~~~~--------~~~~~CP~Cr~~ 81 (180)
.+.+.| +|.....+-..+ .|..=|...|+.-... ...+.||.|+..
T Consensus 14 ~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 14 EIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 356788 899885544344 3656677788753321 246889988654
No 168
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=43.04 E-value=8.3 Score=25.94 Aligned_cols=46 Identities=17% Similarity=0.434 Sum_probs=30.1
Q ss_pred CccccccccccCC---Cc--eeccccccchHHhhhcc---ccCCccCCCCCCCC
Q psy2696 36 NPLLCHVCDDYYT---EP--CLLSCYHSFCARCLRGR---TVDGKLSCPICGQH 81 (180)
Q Consensus 36 ~~l~C~iC~~~~~---~P--~~l~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~ 81 (180)
..-.|.+|...|. ++ .-..|.|.+|.+|-... .....+.|-.|+..
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 4678999999884 22 22369999999886543 12345667666553
No 169
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=42.32 E-value=10 Score=21.93 Aligned_cols=44 Identities=32% Similarity=0.547 Sum_probs=27.1
Q ss_pred CccccccccccCCCceec--cccccchHHhhhcc---ccCCccCCCCCCCC
Q psy2696 36 NPLLCHVCDDYYTEPCLL--SCYHSFCARCLRGR---TVDGKLSCPICGQH 81 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~~l--~C~H~fC~~Cl~~~---~~~~~~~CP~Cr~~ 81 (180)
....|.+|.+.- + .++ .|...|...|+... ...+.+.||.|...
T Consensus 7 ~~~~C~vC~~~g-~-ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 7 NEDECAVCRDGG-E-LICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp CCCSBSSSSCCS-S-CEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCccCCCCC-C-EEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 456788887632 1 111 47767777888642 23367788888654
No 170
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=41.84 E-value=55 Score=26.33 Aligned_cols=18 Identities=33% Similarity=0.680 Sum_probs=7.8
Q ss_pred CCcCcccccccccccC-CH
Q psy2696 112 ANCDKRDRNAMYFCST-CA 129 (180)
Q Consensus 112 ~~C~~h~~~~~~~C~~-C~ 129 (180)
..|-.-.+..-.||.| |.
T Consensus 6 ~~c~~~~~~fG~~CPTtCg 24 (411)
T 3ghg_C 6 DNCCILDERFGSYCPTTCG 24 (411)
T ss_dssp --------CCSCEEECSHH
T ss_pred CCceecCcccCCcCCCcch
Confidence 3455445667788886 87
No 171
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=41.79 E-value=6.2 Score=22.46 Aligned_cols=45 Identities=27% Similarity=0.586 Sum_probs=26.9
Q ss_pred CCccccccccccCCCceec--c--cc-ccchHHhhhcc-ccCCccCCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLL--S--CY-HSFCARCLRGR-TVDGKLSCPICGQ 80 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l--~--C~-H~fC~~Cl~~~-~~~~~~~CP~Cr~ 80 (180)
.+...| +|.+......+. . |. .-|...|+.-. ...+.+.||.|..
T Consensus 8 ~e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 8 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccC
Confidence 346777 898876543322 2 44 45777787632 1236788988853
No 172
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.61 E-value=21 Score=20.92 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=19.7
Q ss_pred ccccccccccCCCc----eeccccccchHH
Q psy2696 37 PLLCHVCDDYYTEP----CLLSCYHSFCAR 62 (180)
Q Consensus 37 ~l~C~iC~~~~~~P----~~l~C~H~fC~~ 62 (180)
...|..|.....-+ ...-|+.+||..
T Consensus 15 ~~rC~~C~kk~gL~~~egf~CrCg~~FC~~ 44 (67)
T 1x4w_A 15 RRRCFQCQTKLELVQQELGSCRCGYVFCML 44 (67)
T ss_dssp TTBCSSSCCBCCHHHHHHHCCSSSCCCCTT
T ss_pred CCcchhhCCeecccccCceEecCCCEehhc
Confidence 46899999888755 344799999864
No 173
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=40.12 E-value=16 Score=21.96 Aligned_cols=42 Identities=26% Similarity=0.566 Sum_probs=24.3
Q ss_pred ccccccccCCCceec---cccccchHHhhhccc---cCCc-cCCCCCCC
Q psy2696 39 LCHVCDDYYTEPCLL---SCYHSFCARCLRGRT---VDGK-LSCPICGQ 80 (180)
Q Consensus 39 ~C~iC~~~~~~P~~l---~C~H~fC~~Cl~~~~---~~~~-~~CP~Cr~ 80 (180)
.|.+|...-..-.+| .|...|...|+.... ..+. +.||.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 455665543322333 477778888886431 2234 88999864
No 174
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.41 E-value=34 Score=20.59 Aligned_cols=38 Identities=18% Similarity=0.471 Sum_probs=23.8
Q ss_pred ccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 37 PLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
.-.|..|.+......+..-+..|...| +.|..|+..+.
T Consensus 25 ~~~C~~C~~~I~~~~v~a~~~~~H~~C---------F~C~~C~~~L~ 62 (90)
T 2dar_A 25 TPMCAHCNQVIRGPFLVALGKSWHPEE---------FNCAHCKNTMA 62 (90)
T ss_dssp CCBBSSSCCBCCSCEEEETTEEECTTT---------CBCSSSCCBCS
T ss_pred CCCCccCCCEecceEEEECCccccccC---------CccCCCCCCCC
Confidence 457999988776554444444444444 45878877654
No 175
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=38.79 E-value=6.9 Score=24.84 Aligned_cols=10 Identities=40% Similarity=1.089 Sum_probs=9.1
Q ss_pred cchHHhhhcc
Q psy2696 58 SFCARCLRGR 67 (180)
Q Consensus 58 ~fC~~Cl~~~ 67 (180)
-||+.||.+|
T Consensus 42 GFCRNCLskW 51 (105)
T 2o35_A 42 GFCRNCLSNW 51 (105)
T ss_dssp SCCHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5999999998
No 176
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=38.73 E-value=7 Score=24.79 Aligned_cols=10 Identities=40% Similarity=1.029 Sum_probs=9.1
Q ss_pred cchHHhhhcc
Q psy2696 58 SFCARCLRGR 67 (180)
Q Consensus 58 ~fC~~Cl~~~ 67 (180)
-||..||.+|
T Consensus 41 GFCRNCLskW 50 (104)
T 3fyb_A 41 DFCRNCLAKW 50 (104)
T ss_dssp SCCHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5999999998
No 177
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=38.26 E-value=63 Score=19.23 Aligned_cols=44 Identities=0% Similarity=0.024 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 131 VRTGLMNCRSSLDELQLNCDTEKMTIQSFCQGMIDAITKTQNSM 174 (180)
Q Consensus 131 ~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~~~~l 174 (180)
++..+..++..+..+.+.+......+++-+.+|...+......-
T Consensus 12 LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~~~~~~~~ 55 (74)
T 3swf_A 12 MESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKPLIDTE 55 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCc
Confidence 56667888888888888888888888888888888777655443
No 178
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=37.78 E-value=83 Score=20.46 Aligned_cols=36 Identities=11% Similarity=0.112 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 135 LMNCRSSLDELQLNCDTEKMTIQSFCQGMIDAITKT 170 (180)
Q Consensus 135 ~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~ 170 (180)
+..++..+++...+.....++++..+..|.+.|.+.
T Consensus 55 V~tL~~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a 90 (121)
T 3mq7_A 55 VMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDA 90 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444443333444444444444444433
No 179
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=37.59 E-value=19 Score=19.33 Aligned_cols=35 Identities=23% Similarity=0.502 Sum_probs=19.0
Q ss_pred ccccccccccCCCceeccccccchHHhhhcccc-CCccCCCCCCCC
Q psy2696 37 PLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTV-DGKLSCPICGQH 81 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~-~~~~~CP~Cr~~ 81 (180)
...|.+|.-+|..-.--+ ..+.. -..+.||.|+..
T Consensus 4 ~y~C~vCGyvyd~~~Gd~----------t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDN----------VPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGGTT----------CCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcCCC----------cchhhCCCCCcCcCCCCc
Confidence 457888887776221111 12211 234689999764
No 180
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.56 E-value=49 Score=19.23 Aligned_cols=40 Identities=15% Similarity=0.315 Sum_probs=23.8
Q ss_pred CCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 35 KNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
...-.|.-|.+......+..-+..|...| +.|-.|+..+.
T Consensus 13 ~~~~~C~~C~~~I~~~~~~a~~~~~H~~C---------F~C~~C~~~L~ 52 (79)
T 1x62_A 13 QKLPMCDKCGTGIVGVFVKLRDRHRHPEC---------YVCTDCGTNLK 52 (79)
T ss_dssp CCCCCCSSSCCCCCSSCEECSSCEECTTT---------TSCSSSCCCHH
T ss_pred CCCCccccCCCCccCcEEEECcceeCcCc---------CeeCCCCCCCC
Confidence 33568999988776544444444444444 35777766543
No 181
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=37.23 E-value=24 Score=24.45 Aligned_cols=28 Identities=25% Similarity=0.827 Sum_probs=21.0
Q ss_pred cccccchHHhhhccc---------cCCccCCCCCCCC
Q psy2696 54 SCYHSFCARCLRGRT---------VDGKLSCPICGQH 81 (180)
Q Consensus 54 ~C~H~fC~~Cl~~~~---------~~~~~~CP~Cr~~ 81 (180)
+|...||..||.... ....+.|-.|...
T Consensus 98 ~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~ 134 (159)
T 3a1b_A 98 NCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHK 134 (159)
T ss_dssp TTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSS
T ss_pred CCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCc
Confidence 477899999998752 2357889999653
No 182
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=36.92 E-value=10 Score=32.47 Aligned_cols=48 Identities=19% Similarity=0.429 Sum_probs=29.9
Q ss_pred chHHhhhccc-------cCCccCCCCCCCCc-ccCC-CCCCCCChHHHHHHHHHHhcCC
Q psy2696 59 FCARCLRGRT-------VDGKLSCPICGQHT-LLKE-GSTLPPPDNVLKQLIEVANAEN 108 (180)
Q Consensus 59 fC~~Cl~~~~-------~~~~~~CP~Cr~~~-~~~~-~~~~l~~n~~l~~l~~~~~~~~ 108 (180)
.|..|..++. ..+.+.||.|.-.+ .+.+ .+ ......+...++.+++..
T Consensus 69 mC~~C~~EY~dp~dRRfHAqp~aCp~CGP~l~~l~~~~~--~~~~~~i~~aa~~L~~G~ 125 (657)
T 3ttc_A 69 LCPACDKEYRDPLDRRFHAQPVACPECGPYLEWVSHGEH--AEQEAALQAAIAQLKMGN 125 (657)
T ss_dssp CCHHHHHHHHCTTSTTTTCTTCCCTTTSCCEEEEETTEE--EEHHHHHHHHHHHHHTTC
T ss_pred CChHHHHHhCCCCCCcCcCCCCcCcccCccceEeecCCC--CcchHHHHHHHHHHHcCC
Confidence 4999998762 34678999998877 4432 11 112345566666666654
No 183
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=36.66 E-value=26 Score=27.92 Aligned_cols=28 Identities=18% Similarity=0.610 Sum_probs=21.5
Q ss_pred cccccchHHhhhccc---------cCCccCCCCCCCC
Q psy2696 54 SCYHSFCARCLRGRT---------VDGKLSCPICGQH 81 (180)
Q Consensus 54 ~C~H~fC~~Cl~~~~---------~~~~~~CP~Cr~~ 81 (180)
.|...||..||.... ....+.|-.|...
T Consensus 112 ~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 112 DCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp TCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 588899999998762 2357889999654
No 184
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=36.07 E-value=74 Score=19.42 Aligned_cols=33 Identities=12% Similarity=0.125 Sum_probs=15.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 140 SSLDELQLNCDTEKMTIQSFCQGMIDAITKTQN 172 (180)
Q Consensus 140 ~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~~~ 172 (180)
+.+..|...+..+...-...++.+.+.|+..+.
T Consensus 40 EqL~~LKkkl~~el~~h~~ei~~le~~i~rhk~ 72 (84)
T 1gmj_A 40 EQLAALKKHKENEISHHAKEIERLQKEIERHKQ 72 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444455555555544433
No 185
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=35.72 E-value=9.3 Score=21.90 Aligned_cols=44 Identities=25% Similarity=0.613 Sum_probs=27.3
Q ss_pred CCccccccccccCCCceecc-----cc-ccchHHhhhccc-cCCccCCCCCCC
Q psy2696 35 KNPLLCHVCDDYYTEPCLLS-----CY-HSFCARCLRGRT-VDGKLSCPICGQ 80 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l~-----C~-H~fC~~Cl~~~~-~~~~~~CP~Cr~ 80 (180)
.+...| +|.+.... ..+. |. .-|...|+.-.. ..+.+.||.|+.
T Consensus 9 ~e~~yC-~C~~~~~g-~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 9 NEPTYC-LCNQVSYG-EMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRG 59 (62)
T ss_dssp -CCEET-TTTEECCS-EEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHT
T ss_pred CCCcEE-ECCCCCCC-CeeeeeCCCCCcccEecccCCcCcCCCCCEECcCccc
Confidence 345777 89887553 3342 44 567788876331 235788998854
No 186
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=35.71 E-value=68 Score=18.85 Aligned_cols=17 Identities=24% Similarity=0.632 Sum_probs=12.3
Q ss_pred CCcccccc--ccccCCCce
Q psy2696 35 KNPLLCHV--CDDYYTEPC 51 (180)
Q Consensus 35 ~~~l~C~i--C~~~~~~P~ 51 (180)
...+.|.+ |...|....
T Consensus 13 ~~~~~C~~~~C~~~f~~~~ 31 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSS 31 (100)
T ss_dssp CCCEECCSSSCCCEESCHH
T ss_pred CcceEcCCCCCCCcccCHH
Confidence 44678987 999887543
No 187
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=35.45 E-value=15 Score=19.88 Aligned_cols=30 Identities=23% Similarity=0.601 Sum_probs=17.3
Q ss_pred ccccccchHHhhhccccCCccCCCCCCCCcccC
Q psy2696 53 LSCYHSFCARCLRGRTVDGKLSCPICGQHTLLK 85 (180)
Q Consensus 53 l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~ 85 (180)
+-||++|-.+=++. -..+.||.|+..+-..
T Consensus 7 ~rCg~~fs~~el~~---lP~IrCpyCGyrii~K 36 (48)
T 4ayb_P 7 GKCWKTFTDEQLKV---LPGVRCPYCGYKIIFM 36 (48)
T ss_dssp CCTTTTCCCCCSCC---CSSSCCTTTCCSCEEC
T ss_pred eccCCCccHHHHhh---CCCcccCccCcEEEEE
Confidence 34666554333222 2567899998876443
No 188
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=35.02 E-value=26 Score=22.59 Aligned_cols=46 Identities=15% Similarity=0.366 Sum_probs=32.9
Q ss_pred CccccccccccCCC-ceeccccccchHHhhhccccCCccCCCCCCCCccc
Q psy2696 36 NPLLCHVCDDYYTE-PCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLL 84 (180)
Q Consensus 36 ~~l~C~iC~~~~~~-P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~ 84 (180)
+-+.|..|...+.. +....=+..+|..|..+.. ...|+.|...+..
T Consensus 29 ~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~~---~~~C~~C~~~I~~ 75 (126)
T 2xqn_T 29 KHFCCFDCDSILAGEIYVMVNDKPVCKPCYVKNH---AVVCQGCHNAIDP 75 (126)
T ss_dssp GGSBCTTTCCBCTTSEEEEETTEEEEHHHHHHHS---CCBCTTTCSBCCT
T ss_pred CCCCcCCCCCCCCcCEEEeECCEEechHHhCcCc---CccCcccCCcCCc
Confidence 45789999988875 3344567789999987542 2369999887764
No 189
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=34.23 E-value=56 Score=18.87 Aligned_cols=26 Identities=27% Similarity=0.617 Sum_probs=19.4
Q ss_pred ccccccccccCCC-ceeccccccchHH
Q psy2696 37 PLLCHVCDDYYTE-PCLLSCYHSFCAR 62 (180)
Q Consensus 37 ~l~C~iC~~~~~~-P~~l~C~H~fC~~ 62 (180)
...|..|.....- +...-|+.+||..
T Consensus 15 ~~rC~~C~kkvgl~~f~CrCg~~FC~~ 41 (64)
T 1wfh_A 15 PNRCTVCRKRVGLTGFMCRCGTTFCGS 41 (64)
T ss_dssp CCCCTTTCCCCCTTCEECSSSCEECTT
T ss_pred CCcChhhCCccCccCEEeecCCEeccc
Confidence 4689999886553 4556799999864
No 190
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=34.21 E-value=1.6e+02 Score=23.73 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 133 TGLMNCRSSLDELQLNCDTEKMTIQSFCQGMIDAITKTQNSMI 175 (180)
Q Consensus 133 ~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~~~~ll 175 (180)
.+++.++.....+..++.++..++...+.++.+-|-+++.+++
T Consensus 97 ~aLk~lQ~e~~~le~ef~~ev~eLE~Ky~~~~~PLy~KR~eII 139 (417)
T 2ayu_A 97 LSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRII 139 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667778889999999999999999999999999999887
No 191
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=33.27 E-value=44 Score=15.95 Aligned_cols=22 Identities=5% Similarity=0.282 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2696 150 DTEKMTIQSFCQGMIDAITKTQ 171 (180)
Q Consensus 150 ~~~~~~i~~~~~~l~~~l~~~~ 171 (180)
+++...++...++|++.++..+
T Consensus 5 ee~~r~l~~ivq~lq~r~drle 26 (32)
T 2akf_A 5 EEDVRNLNAIVQKLQERLDRLE 26 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444433
No 192
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=33.06 E-value=9.6 Score=26.48 Aligned_cols=48 Identities=21% Similarity=0.522 Sum_probs=32.0
Q ss_pred CCccccccccccCCCc-eec---cccccchHHhhhccc----cCCccCCCCCCCCcc
Q psy2696 35 KNPLLCHVCDDYYTEP-CLL---SCYHSFCARCLRGRT----VDGKLSCPICGQHTL 83 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P-~~l---~C~H~fC~~Cl~~~~----~~~~~~CP~Cr~~~~ 83 (180)
.+...| +|...+.+. ..+ .|..-|...|+.-.. ....+.||.|+....
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~~ 61 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTED 61 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchhc
Confidence 456889 999887532 233 477778888885431 246789999987543
No 193
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=32.95 E-value=8 Score=21.46 Aligned_cols=41 Identities=20% Similarity=0.404 Sum_probs=26.0
Q ss_pred CccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcccCC
Q psy2696 36 NPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTLLKE 86 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 86 (180)
....|++|...|.....|. ........+.|+.|...+....
T Consensus 13 k~~~C~~C~k~F~~~~~l~----------~~H~~~k~~~C~~C~k~f~~~~ 53 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEANQ----------LFDPMTGTFRCTFCHTEVEEDE 53 (62)
T ss_dssp SEEECSSSCCEEEHHHHHH----------HEETTTTEEBCSSSCCBCEECT
T ss_pred CCccCCCCCchhccHHHhH----------hhcCCCCCEECCCCCCccccCc
Confidence 3578888888886543222 1112345688999998876554
No 194
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=32.67 E-value=1.8e+02 Score=23.28 Aligned_cols=25 Identities=8% Similarity=0.070 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 152 EKMTIQSFCQGMIDAITKTQNSMIM 176 (180)
Q Consensus 152 ~~~~i~~~~~~l~~~l~~~~~~ll~ 176 (180)
+...++..++.+...+.+..+.+.+
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (487)
T 3oja_A 450 ENARLKKLNGEADLALASANATLQE 474 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhhhhhhhhhhhhHhcccHHHH
Confidence 3333444444444444444444433
No 195
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=31.72 E-value=21 Score=19.63 Aligned_cols=18 Identities=28% Similarity=0.909 Sum_probs=10.5
Q ss_pred CCCcCcccccccccccCC
Q psy2696 111 CANCDKRDRNAMYFCSTC 128 (180)
Q Consensus 111 c~~C~~h~~~~~~~C~~C 128 (180)
|..|...+.++.-||..|
T Consensus 14 C~~C~k~N~Pl~ryC~rC 31 (53)
T 2cr8_A 14 CTECKKFNSPSKRYCFRC 31 (53)
T ss_dssp CSSSCCEECSSCCBCTTT
T ss_pred cccccccCCCccchhHHH
Confidence 555665555555666555
No 196
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=30.26 E-value=1.1e+02 Score=19.76 Aligned_cols=30 Identities=7% Similarity=0.083 Sum_probs=15.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q psy2696 139 RSSLDELQLNCDTEKMTIQSFCQGMIDAIT 168 (180)
Q Consensus 139 ~~~~~~l~~~~~~~~~~i~~~~~~l~~~l~ 168 (180)
++....|+...+++..+++..++.+.+.++
T Consensus 56 E~kklqLkse~e~E~ae~k~KYD~~lqe~e 85 (115)
T 3vem_A 56 EEKKSILKAELERKMAEVQAEFRRKFHEVE 85 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555555555544444
No 197
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=29.73 E-value=68 Score=17.06 Aligned_cols=19 Identities=21% Similarity=0.183 Sum_probs=8.7
Q ss_pred HHHHHHhHHHHHHHHHHHH
Q psy2696 142 LDELQLNCDTEKMTIQSFC 160 (180)
Q Consensus 142 ~~~l~~~~~~~~~~i~~~~ 160 (180)
++++...+++.+++|.+.+
T Consensus 17 L~E~RkElqK~K~EIIeAi 35 (45)
T 1use_A 17 LEEVKKELQKVKEEIIEAF 35 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444333
No 198
>1erd_A Pheromone ER-2; NMR {Euplotes raikovi} SCOP: a.10.1.1
Probab=28.57 E-value=15 Score=18.26 Aligned_cols=14 Identities=36% Similarity=0.866 Sum_probs=10.9
Q ss_pred ccccccchHHhhhc
Q psy2696 53 LSCYHSFCARCLRG 66 (180)
Q Consensus 53 l~C~H~fC~~Cl~~ 66 (180)
.+|.|+.|..|-..
T Consensus 10 ascehtmcgycqgp 23 (40)
T 1erd_A 10 ASCEHTMCGYCQGP 23 (40)
T ss_dssp HHTCGGGGGGSCHH
T ss_pred HhccccccccccCC
Confidence 47999999888544
No 199
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=28.17 E-value=8.5 Score=17.36 Aligned_cols=8 Identities=50% Similarity=1.493 Sum_probs=6.4
Q ss_pred cccccCCH
Q psy2696 122 MYFCSTCA 129 (180)
Q Consensus 122 ~~~C~~C~ 129 (180)
.+||++|.
T Consensus 5 dffcetcs 12 (26)
T 1loi_A 5 DFFCETCS 12 (26)
T ss_dssp HHHHHTSS
T ss_pred HHHHHhcC
Confidence 47899986
No 200
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.65 E-value=36 Score=18.47 Aligned_cols=17 Identities=24% Similarity=0.581 Sum_probs=12.4
Q ss_pred ccCCccCCCCCCCCccc
Q psy2696 68 TVDGKLSCPICGQHTLL 84 (180)
Q Consensus 68 ~~~~~~~CP~Cr~~~~~ 84 (180)
...+...||.|...+..
T Consensus 8 ~~~~~~~CPrCn~~f~~ 24 (49)
T 2e72_A 8 QDGGRKICPRCNAQFRV 24 (49)
T ss_dssp CCSSCCCCTTTCCCCSS
T ss_pred ccCCceeCCcccccccc
Confidence 34567889999887653
No 201
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=27.51 E-value=2.5e+02 Score=22.89 Aligned_cols=18 Identities=22% Similarity=0.580 Sum_probs=12.1
Q ss_pred CCcCcccccccccccC-CH
Q psy2696 112 ANCDKRDRNAMYFCST-CA 129 (180)
Q Consensus 112 ~~C~~h~~~~~~~C~~-C~ 129 (180)
..|..-......+|.+ |.
T Consensus 68 ~~c~~~~~~~G~~CPTtC~ 86 (464)
T 1m1j_B 68 GGCKHPLDELGVLCPTGCE 86 (464)
T ss_dssp SCEECSSTTTCEEEECTTH
T ss_pred CCccccCCCccCcCCCccH
Confidence 4555555567788886 87
No 202
>3d00_A Tungsten formylmethanofuran dehydrogenase subunit; FWDE/GAPDH domain-like fold, structural genomics, joint CENT structural genomics; HET: MSE; 1.90A {Syntrophus aciditrophicus}
Probab=27.48 E-value=17 Score=25.95 Aligned_cols=27 Identities=26% Similarity=0.677 Sum_probs=22.2
Q ss_pred CCccccccccccCCCceeccccccchHHhhhc
Q psy2696 35 KNPLLCHVCDDYYTEPCLLSCYHSFCARCLRG 66 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~ 66 (180)
.....|++|.+.+.++ +-.+|..|..+
T Consensus 161 ~~~~~C~~CGE~~~~~-----g~~~C~~C~~~ 187 (191)
T 3d00_A 161 GKIVLCPQCREAYPAQ-----DGELCLSCQGG 187 (191)
T ss_dssp CCEEECTTTCCEEEGG-----GCSSCHHHHTT
T ss_pred cCCEECCcCCCChhhC-----CCcCCccccCC
Confidence 4678899999988877 88899999754
No 203
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=27.47 E-value=1.3e+02 Score=19.51 Aligned_cols=26 Identities=12% Similarity=0.134 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy2696 130 SVRTGLMNCRSSLDELQLNCDTEKMT 155 (180)
Q Consensus 130 ~~~~~~~~~~~~~~~l~~~~~~~~~~ 155 (180)
.++++...++..++.+..+++.-...
T Consensus 85 ~~~eA~~~l~~r~~~l~~~~~~l~~~ 110 (133)
T 1fxk_C 85 NFEDAMESIKSQKNELESTLQKMGEN 110 (133)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666665555544444443333
No 204
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=27.41 E-value=47 Score=20.26 Aligned_cols=45 Identities=13% Similarity=0.326 Sum_probs=30.3
Q ss_pred CccccccccccCCCc-eeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 36 NPLLCHVCDDYYTEP-CLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P-~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
+-+.|..|...+... ....=+..||..|..+.. ...|..|...+.
T Consensus 32 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~~---~~~C~~C~~~I~ 77 (101)
T 2cup_A 32 TCFRCAKCLHPLANETFVAKDNKILCNKCTTRED---SPKCKGCFKAIV 77 (101)
T ss_dssp TTCCCSSSCCCTTSSCCEEETTEEECHHHHTTCC---CCBCSSSCCBCC
T ss_pred cCCcccccCCCCCcCeeECcCCEEEChhHhhhhc---CCccccCCCccc
Confidence 457888888888643 233456788888876542 236888877665
No 205
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=27.37 E-value=9.5 Score=18.25 Aligned_cols=15 Identities=13% Similarity=0.241 Sum_probs=8.5
Q ss_pred cccccccccCCCcee
Q psy2696 38 LLCHVCDDYYTEPCL 52 (180)
Q Consensus 38 l~C~iC~~~~~~P~~ 52 (180)
+.|++|....-++++
T Consensus 4 ~~CpvCk~q~Pd~kt 18 (28)
T 2jvx_A 4 FCCPKCQYQAPDMDT 18 (28)
T ss_dssp EECTTSSCEESSHHH
T ss_pred ccCccccccCcChHH
Confidence 456666665555543
No 206
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=27.11 E-value=28 Score=18.72 Aligned_cols=18 Identities=22% Similarity=0.827 Sum_probs=10.4
Q ss_pred CCCcCcccccccccccCC
Q psy2696 111 CANCDKRDRNAMYFCSTC 128 (180)
Q Consensus 111 c~~C~~h~~~~~~~C~~C 128 (180)
|..|...+.++.-||.-|
T Consensus 16 C~~C~~~N~Pl~r~C~rC 33 (46)
T 2c6a_A 16 CTSCNEMNPPLPSHCNRC 33 (46)
T ss_dssp CTTTCCEECSSCSSCTTT
T ss_pred cccccccCCCccchhhHH
Confidence 555665555555566555
No 207
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=27.03 E-value=1.2e+02 Score=18.88 Aligned_cols=27 Identities=11% Similarity=0.023 Sum_probs=10.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy2696 141 SLDELQLNCDTEKMTIQSFCQGMIDAI 167 (180)
Q Consensus 141 ~~~~l~~~~~~~~~~i~~~~~~l~~~l 167 (180)
.+.+|.....+.+..-.+.+..|+.-|
T Consensus 58 tvyeLE~~h~kmKq~YEeEI~rLr~eL 84 (92)
T 3vp9_A 58 TVYERELTHRKMKDAYEEEIKHLKLGL 84 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333344443333
No 208
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=26.87 E-value=1.1e+02 Score=18.41 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=13.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy2696 140 SSLDELQLNCDTEKMTIQSFCQGMIDAI 167 (180)
Q Consensus 140 ~~~~~l~~~~~~~~~~i~~~~~~l~~~l 167 (180)
..++.+...++.+..++...++.+.+..
T Consensus 42 ~KL~~mi~~l~~E~~~l~~ni~~lk~K~ 69 (78)
T 3iv1_A 42 QKLEEMVTRLDQEVAEVDKNIELLKKKD 69 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444555555544444444433
No 209
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=25.12 E-value=89 Score=16.86 Aligned_cols=36 Identities=17% Similarity=0.092 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q psy2696 136 MNCRSSLDELQLNCDTEKMTIQSFCQGMIDAITKTQ 171 (180)
Q Consensus 136 ~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~l~~~~ 171 (180)
..++..+++++.+++..-.+|-..++.+-..|++.+
T Consensus 9 ~~vq~LL~qmq~kFq~mS~~I~~riDdM~~RIDdLE 44 (48)
T 3ci9_A 9 SVVQTLLQQMQDKFQTISDQIIGRIDDMSSRIDDLE 44 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 334445555555555555555555555555554443
No 210
>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=24.82 E-value=40 Score=17.99 Aligned_cols=16 Identities=31% Similarity=0.658 Sum_probs=7.5
Q ss_pred CCccccccccccCCCc
Q psy2696 35 KNPLLCHVCDDYYTEP 50 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P 50 (180)
+..-.|.+|.-.|+.|
T Consensus 30 en~GFCTlCf~eyre~ 45 (48)
T 2eqe_A 30 ENKGFCTLCFIEYSGP 45 (48)
T ss_dssp TTTTCCHHHHHHHHSC
T ss_pred ccCceeeeehhhhhcc
Confidence 3344555555444443
No 211
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.75 E-value=37 Score=19.57 Aligned_cols=32 Identities=19% Similarity=0.410 Sum_probs=17.8
Q ss_pred CccccccccccCC--CceeccccccchHHhhhcc
Q psy2696 36 NPLLCHVCDDYYT--EPCLLSCYHSFCARCLRGR 67 (180)
Q Consensus 36 ~~l~C~iC~~~~~--~P~~l~C~H~fC~~Cl~~~ 67 (180)
+-+.|..|...+. ......=+..||..|....
T Consensus 30 ~CF~C~~C~~~L~~~~~f~~~~~~~yC~~C~~~~ 63 (73)
T 1wig_A 30 SCALCVRCGQMFAEGEEMYLQGSSIWHPACRQAA 63 (73)
T ss_dssp TTSCCSSSCCCCCSSCCCEEETTEEECTTHHHHT
T ss_pred CcCEeCCCCCCCCCCCeeEeeCCEEEChHHChHh
Confidence 3467777777765 2233334456666666543
No 212
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=24.45 E-value=59 Score=22.45 Aligned_cols=24 Identities=17% Similarity=0.307 Sum_probs=12.4
Q ss_pred ccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 57 HSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 57 H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
..||..|..+. ....|..|...+.
T Consensus 107 ~~yC~~~y~~~---f~~kC~~C~~~I~ 130 (182)
T 2jtn_A 107 SVYCKDDFFKR---FGTKCAACQLGIP 130 (182)
T ss_dssp EEECHHHHHHT---TSCCCTTTCCCCC
T ss_pred EeeecCccccc---cccccccCCCccC
Confidence 34455554332 1235777776554
No 213
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=24.42 E-value=1.4e+02 Score=19.57 Aligned_cols=32 Identities=3% Similarity=0.078 Sum_probs=21.4
Q ss_pred hHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Q psy2696 148 NCDTEKMTI-QSFCQGMIDAITKTQNSMIMEVQ 179 (180)
Q Consensus 148 ~~~~~~~~i-~~~~~~l~~~l~~~~~~ll~~le 179 (180)
.++.+.+.+ ..++..+.+.+...+.+|++.||
T Consensus 83 r~e~eIQKLTDkyIkkID~ll~~KEKEI~~~~~ 115 (121)
T 3lf9_A 83 QALWEIQKLTDVAVKKIDEVLAAKEKELMEVLE 115 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444 45667777888888888887765
No 214
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=24.34 E-value=16 Score=23.55 Aligned_cols=11 Identities=27% Similarity=0.812 Sum_probs=5.0
Q ss_pred ccccchHHhhh
Q psy2696 55 CYHSFCARCLR 65 (180)
Q Consensus 55 C~H~fC~~Cl~ 65 (180)
|...|...|+.
T Consensus 79 C~~~yH~~Cl~ 89 (114)
T 2kwj_A 79 CDRGYHMYCLN 89 (114)
T ss_dssp SCCEEETTTSS
T ss_pred CCccccccccC
Confidence 44444444444
No 215
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.21 E-value=1e+02 Score=17.63 Aligned_cols=26 Identities=19% Similarity=0.471 Sum_probs=18.0
Q ss_pred cccccc--ccccCCCceecc-ccccchHH
Q psy2696 37 PLLCHV--CDDYYTEPCLLS-CYHSFCAR 62 (180)
Q Consensus 37 ~l~C~i--C~~~~~~P~~l~-C~H~fC~~ 62 (180)
...|+. |...-..|.... |+..||.+
T Consensus 12 ~~~Cs~~~Ck~~~ll~f~C~~C~~~FC~~ 40 (63)
T 1x4v_A 12 TNKCERAGCRQREMMKLTCERCSRNFCIK 40 (63)
T ss_dssp CCCCCSTTCCCCCSSCCBCSSSCCBCCHH
T ss_pred CCCCCccCCCCCCccceECCCCCcccCcc
Confidence 456777 877644566666 99999864
No 216
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=23.99 E-value=21 Score=23.02 Aligned_cols=27 Identities=30% Similarity=0.666 Sum_probs=19.6
Q ss_pred ccccccccccCCCceeccccccchHHh
Q psy2696 37 PLLCHVCDDYYTEPCLLSCYHSFCARC 63 (180)
Q Consensus 37 ~l~C~iC~~~~~~P~~l~C~H~fC~~C 63 (180)
...|..|...-+.-.-|.|||.+|.+-
T Consensus 24 ~~~C~~C~~~~~~W~CL~CG~vgCgr~ 50 (109)
T 3c5k_A 24 TQPCGDCGTIQENWVCLSCYQVYCGRY 50 (109)
T ss_dssp TCCCTTTCCCSSEEEETTTCCEEECTT
T ss_pred CCcCccccCCCCeeeeeecCccccCCC
Confidence 456888887666566778998887543
No 217
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=23.93 E-value=79 Score=17.24 Aligned_cols=15 Identities=20% Similarity=0.359 Sum_probs=11.0
Q ss_pred CCCCCCccccccccc
Q psy2696 31 SCGPKNPLLCHVCDD 45 (180)
Q Consensus 31 ~~~l~~~l~C~iC~~ 45 (180)
-+.+-+...||+|.-
T Consensus 30 f~~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 30 FEDLPDDWACPVCGA 44 (52)
T ss_dssp TTSSCTTCCCSSSCC
T ss_pred hHHCCCCCcCCCCCC
Confidence 355667788999875
No 218
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=23.89 E-value=20 Score=24.55 Aligned_cols=13 Identities=23% Similarity=0.823 Sum_probs=1.7
Q ss_pred ccccccccccCCC
Q psy2696 37 PLLCHVCDDYYTE 49 (180)
Q Consensus 37 ~l~C~iC~~~~~~ 49 (180)
...|++|...|..
T Consensus 21 ~~~C~~C~~~f~~ 33 (190)
T 2i13_A 21 PYACPECGKSFSR 33 (190)
T ss_dssp ----------CCS
T ss_pred CCcCCCCccccCC
Confidence 4667777776653
No 219
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=23.56 E-value=3.3e+02 Score=22.89 Aligned_cols=24 Identities=8% Similarity=0.177 Sum_probs=10.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHH
Q psy2696 140 SSLDELQLNCDTEKMTIQSFCQGM 163 (180)
Q Consensus 140 ~~~~~l~~~~~~~~~~i~~~~~~l 163 (180)
+.+..+..++++++..+.+..+..
T Consensus 526 e~~~ql~~kme~~~~~~~~e~~~~ 549 (592)
T 1f5n_A 526 EHLKQLTEKMENDRVQLLKEQERT 549 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444445555554444443333
No 220
>2ffw_A Midline-1; B-BOX, ring finger, zinc-finger, ligase; NMR {Homo sapiens}
Probab=23.47 E-value=51 Score=19.50 Aligned_cols=31 Identities=29% Similarity=0.788 Sum_probs=22.9
Q ss_pred CccccccccccC-C--CceeccccccchHHhhhc
Q psy2696 36 NPLLCHVCDDYY-T--EPCLLSCYHSFCARCLRG 66 (180)
Q Consensus 36 ~~l~C~iC~~~~-~--~P~~l~C~H~fC~~Cl~~ 66 (180)
..+.|.+|...- . .-.-+.|.-+||..|+..
T Consensus 29 ~~v~C~~C~~~~~~~A~ksCl~C~~s~C~~hl~~ 62 (78)
T 2ffw_A 29 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 62 (78)
T ss_dssp CCCBCSSCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCccCCcCCCCCCCCCeeEccCccchhhhhhhHh
Confidence 358899998643 2 224567999999999985
No 221
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=23.11 E-value=1.3e+02 Score=18.04 Aligned_cols=27 Identities=19% Similarity=0.203 Sum_probs=10.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHH
Q psy2696 140 SSLDELQLNCDTEKMTIQSFCQGMIDA 166 (180)
Q Consensus 140 ~~~~~l~~~~~~~~~~i~~~~~~l~~~ 166 (180)
..+.++..........++..+..+...
T Consensus 15 ~~l~e~e~~~~~~~~~~q~~i~~lE~e 41 (84)
T 1gk4_A 15 RQMREMEENFAVEAANYQDTIGRLQDE 41 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333333
No 222
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=23.10 E-value=1e+02 Score=19.89 Aligned_cols=39 Identities=21% Similarity=0.415 Sum_probs=24.1
Q ss_pred CccccccccccCCCce-eccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 36 NPLLCHVCDDYYTEPC-LLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~-~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
....|.-|.+...+.. +..-+..|...| +.|-.|+..+.
T Consensus 60 ~~~~C~~C~~~I~~~~~v~a~~~~wH~~C---------F~C~~C~~~L~ 99 (123)
T 2l4z_A 60 SWKRCAGCGGKIADRFLLYAMDSYWHSRC---------LKCSSCQAQLG 99 (123)
T ss_dssp SCSBBSSSSSBCCSSSEEEETTEEEETTT---------SBCTTTCCBGG
T ss_pred cCCcCcCCCCCcCCcEEEEeCCcEEcccc---------cCcCcCCCccc
Confidence 3568999988776543 333444444334 46888887764
No 223
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=22.91 E-value=11 Score=21.88 Aligned_cols=44 Identities=14% Similarity=0.396 Sum_probs=24.4
Q ss_pred CccccccccccCCCceecc-----ccccchHHhhhccc---c----CCccCCCCCCC
Q psy2696 36 NPLLCHVCDDYYTEPCLLS-----CYHSFCARCLRGRT---V----DGKLSCPICGQ 80 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~~l~-----C~H~fC~~Cl~~~~---~----~~~~~CP~Cr~ 80 (180)
+.+.| +|.....+...+. |..=|...|+.-.. . ...+.||.|+.
T Consensus 9 ~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 9 AKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp CEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 45778 7987766554554 44445566653211 0 12477888753
No 224
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=22.74 E-value=58 Score=22.18 Aligned_cols=46 Identities=20% Similarity=0.339 Sum_probs=30.9
Q ss_pred CCccccccccccCCCceeccccccchHHhhhccccCCccCCCCCCCCcc
Q psy2696 35 KNPLLCHVCDDYYTEPCLLSCYHSFCARCLRGRTVDGKLSCPICGQHTL 83 (180)
Q Consensus 35 ~~~l~C~iC~~~~~~P~~l~C~H~fC~~Cl~~~~~~~~~~CP~Cr~~~~ 83 (180)
.+-+.|..|...+......-=|..||..|..+... ..|..|...+.
T Consensus 31 ~~CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~---~~C~~C~~~I~ 76 (169)
T 2rgt_A 31 SKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFG---TKCAACQLGIP 76 (169)
T ss_dssp TTTSBCTTTCCBCCSCCEESSSCEECHHHHHHHHS---CBCTTTCCBCC
T ss_pred cccCccCCCCCcCCCCCcccCCeeeeccccccccc---ccccccccccC
Confidence 35678999988887543334567788888765422 25888877654
No 225
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=22.13 E-value=18 Score=15.62 Aligned_cols=13 Identities=23% Similarity=0.910 Sum_probs=7.2
Q ss_pred cccccccccCCCc
Q psy2696 38 LLCHVCDDYYTEP 50 (180)
Q Consensus 38 l~C~iC~~~~~~P 50 (180)
..|++|...|..+
T Consensus 4 ~~C~~C~~~f~~~ 16 (30)
T 2m0d_A 4 YQCDYCGRSFSDP 16 (30)
T ss_dssp EECTTTCCEESCH
T ss_pred ccCCCCCcccCCH
Confidence 4566666655543
No 226
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=22.08 E-value=22 Score=14.96 Aligned_cols=12 Identities=25% Similarity=0.830 Sum_probs=7.2
Q ss_pred ccccccccCCCc
Q psy2696 39 LCHVCDDYYTEP 50 (180)
Q Consensus 39 ~C~iC~~~~~~P 50 (180)
.|.+|...|..+
T Consensus 3 ~C~~C~k~f~~~ 14 (27)
T 1znf_A 3 KCGLCERSFVEK 14 (27)
T ss_dssp BCSSSCCBCSSH
T ss_pred cCCCCCCcCCCH
Confidence 466666666543
No 227
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=27.58 E-value=19 Score=15.60 Aligned_cols=10 Identities=20% Similarity=0.840 Sum_probs=4.5
Q ss_pred ccccccccCC
Q psy2696 39 LCHVCDDYYT 48 (180)
Q Consensus 39 ~C~iC~~~~~ 48 (180)
.|++|...|.
T Consensus 5 ~C~~C~k~f~ 14 (30)
T 2lvr_A 5 VCIHCQRQFA 14 (30)
Confidence 3444444443
No 228
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=27.52 E-value=19 Score=15.13 Aligned_cols=11 Identities=18% Similarity=0.872 Sum_probs=5.8
Q ss_pred ccccccccCCC
Q psy2696 39 LCHVCDDYYTE 49 (180)
Q Consensus 39 ~C~iC~~~~~~ 49 (180)
.|++|...|..
T Consensus 4 ~C~~C~k~f~~ 14 (26)
T 2lvu_A 4 VCERCGKRFVQ 14 (26)
Confidence 45555555543
No 229
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=21.70 E-value=18 Score=15.41 Aligned_cols=12 Identities=17% Similarity=0.653 Sum_probs=6.5
Q ss_pred cccccccccCCC
Q psy2696 38 LLCHVCDDYYTE 49 (180)
Q Consensus 38 l~C~iC~~~~~~ 49 (180)
..|+.|...|..
T Consensus 4 ~~C~~C~k~f~~ 15 (27)
T 2kvh_A 4 FSCSLCPQRSRD 15 (27)
T ss_dssp EECSSSSCEESS
T ss_pred ccCCCcChhhCC
Confidence 455666555543
No 230
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=21.69 E-value=25 Score=16.36 Aligned_cols=14 Identities=29% Similarity=0.878 Sum_probs=10.3
Q ss_pred ccccccccccCCCc
Q psy2696 37 PLLCHVCDDYYTEP 50 (180)
Q Consensus 37 ~l~C~iC~~~~~~P 50 (180)
...|++|...|..+
T Consensus 11 ~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 11 PFQCPDCDRSFSRS 24 (37)
T ss_dssp SBCCTTTCCCBSSH
T ss_pred CccCCCCCcccCcH
Confidence 56788888877754
No 231
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=21.68 E-value=35 Score=18.43 Aligned_cols=42 Identities=14% Similarity=0.320 Sum_probs=22.7
Q ss_pred cccccccccCCCc-eecc----ccccchHHhhhccc---cCCccCCCCCC
Q psy2696 38 LLCHVCDDYYTEP-CLLS----CYHSFCARCLRGRT---VDGKLSCPICG 79 (180)
Q Consensus 38 l~C~iC~~~~~~P-~~l~----C~H~fC~~Cl~~~~---~~~~~~CP~Cr 79 (180)
-.|.+|...+++- ..+. |..=|...|+.-.. ....+.||.|+
T Consensus 3 c~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 3 CAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CSCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred ccCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 3567888887532 2232 44455566654321 12567788774
No 232
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.60 E-value=27 Score=16.05 Aligned_cols=16 Identities=19% Similarity=0.611 Sum_probs=11.3
Q ss_pred CccccccccccCCCce
Q psy2696 36 NPLLCHVCDDYYTEPC 51 (180)
Q Consensus 36 ~~l~C~iC~~~~~~P~ 51 (180)
....|++|...|..+.
T Consensus 8 ~~~~C~~C~k~f~~~~ 23 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKG 23 (36)
T ss_dssp SSCBCTTTCCBCSSHH
T ss_pred CCeecCcCCCCcCchH
Confidence 3577888888887543
No 233
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=21.42 E-value=22 Score=15.18 Aligned_cols=12 Identities=25% Similarity=0.949 Sum_probs=7.6
Q ss_pred cccccccccCCC
Q psy2696 38 LLCHVCDDYYTE 49 (180)
Q Consensus 38 l~C~iC~~~~~~ 49 (180)
..|++|...|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 1ard_A 3 FVCEVCTRAFAR 14 (29)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCcccCC
Confidence 456777766654
No 234
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=21.27 E-value=26 Score=14.82 Aligned_cols=12 Identities=25% Similarity=0.731 Sum_probs=6.3
Q ss_pred cccccccccCCC
Q psy2696 38 LLCHVCDDYYTE 49 (180)
Q Consensus 38 l~C~iC~~~~~~ 49 (180)
..|+.|...|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 345556555543
No 235
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=21.25 E-value=53 Score=19.04 Aligned_cols=46 Identities=20% Similarity=0.368 Sum_probs=26.7
Q ss_pred CCCccccccccccCCCc-eec---cccccchHHhhhccc---cCCccCCCCCCC
Q psy2696 34 PKNPLLCHVCDDYYTEP-CLL---SCYHSFCARCLRGRT---VDGKLSCPICGQ 80 (180)
Q Consensus 34 l~~~l~C~iC~~~~~~P-~~l---~C~H~fC~~Cl~~~~---~~~~~~CP~Cr~ 80 (180)
..+.+.| +|....++- ..+ .|..=|...|+.-.. ....+.||.|+.
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~ 65 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIE 65 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHH
T ss_pred CCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccC
Confidence 4556788 798876543 233 355555566654321 234677888754
No 236
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=20.76 E-value=37 Score=19.54 Aligned_cols=16 Identities=25% Similarity=0.717 Sum_probs=10.9
Q ss_pred CCccCCCCCCCCcccC
Q psy2696 70 DGKLSCPICGQHTLLK 85 (180)
Q Consensus 70 ~~~~~CP~Cr~~~~~~ 85 (180)
...+.||.|+..+-.+
T Consensus 36 ~~~iRC~~CG~RILyK 51 (63)
T 3h0g_L 36 KEVIRCRECGHRVMYK 51 (63)
T ss_dssp SSCCCCSSSCCCCCBC
T ss_pred CCceECCCCCcEEEEE
Confidence 3567888888766544
No 237
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=26.04 E-value=21 Score=15.40 Aligned_cols=12 Identities=25% Similarity=0.755 Sum_probs=6.4
Q ss_pred cccccccccCCC
Q psy2696 38 LLCHVCDDYYTE 49 (180)
Q Consensus 38 l~C~iC~~~~~~ 49 (180)
..|++|...|..
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2lvt_A 3 CQCVMCGKAFTQ 14 (29)
Confidence 345556555543
No 238
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=20.43 E-value=88 Score=17.38 Aligned_cols=14 Identities=14% Similarity=0.154 Sum_probs=9.8
Q ss_pred CCCCCccccccccc
Q psy2696 32 CGPKNPLLCHVCDD 45 (180)
Q Consensus 32 ~~l~~~l~C~iC~~ 45 (180)
..+...+.||.|..
T Consensus 6 ~~ll~~~~Cp~C~~ 19 (58)
T 1dl6_A 6 LDALPRVTCPNHPD 19 (58)
T ss_dssp CCCCSCCSBTTBSS
T ss_pred hhccccccCcCCCC
Confidence 34566678998875
Done!