BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy2697
         (165 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|C6KTD2|HKNMT_PLAF7 Putative histone-lysine N-methyltransferase PFF1440w OS=Plasmodium
            falciparum (isolate 3D7) GN=PFF1440w PE=3 SV=1
          Length = 6753

 Score = 33.1 bits (74), Expect = 0.73,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 37/67 (55%), Gaps = 4/67 (5%)

Query: 47   QNERPDLMQN----KRLDLMKEENPDLMREEKPDLMKNERPDLMKEEMPDLMKEEKPDLM 102
            +NE+ +LM+N    K  D++  +  D++  +  D++ N+  D++  +  D++  +  D++
Sbjct: 4346 ENEKENLMENVTNDKTSDIINNKTSDIINNKTSDIINNKTSDIINNKTSDIINNKTSDII 4405

Query: 103  KEEKPDL 109
              +  D+
Sbjct: 4406 NNKTSDI 4412


>sp|Q13477|MADCA_HUMAN Mucosal addressin cell adhesion molecule 1 OS=Homo sapiens
           GN=MADCAM1 PE=1 SV=2
          Length = 382

 Score = 32.7 bits (73), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 16/36 (44%)

Query: 73  EKPDLMKNERPDLMKEEMPDLMKEEKPDLMKEEKPD 108
           E PD    E PD    E PD   +E PD    E PD
Sbjct: 231 EPPDTTSPESPDTTSPESPDTTSQEPPDTTSPEPPD 266



 Score = 31.6 bits (70), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 16/36 (44%)

Query: 65  ENPDLMREEKPDLMKNERPDLMKEEMPDLMKEEKPD 100
           E PD    E PD    E PD   +E PD    E PD
Sbjct: 231 EPPDTTSPESPDTTSPESPDTTSQEPPDTTSPEPPD 266


>sp|O18806|FA8_CANFA Coagulation factor VIII OS=Canis familiaris GN=F8 PE=2 SV=1
          Length = 2343

 Score = 30.4 bits (67), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 17/104 (16%)

Query: 48   NERPDLMQNKRLDLMKEENPDLMREEKPDLMKNERPDLMKEEMPDLMKEE-KPDLMKEEK 106
            + +  L +N  +   K+E+P  +R E PDL  ++ P L     PD +K   K  L  E++
Sbjct: 1079 SNKTTLSKNVEMAHQKKEDPVPLRAENPDLSSSKIPFL-----PDWIKTHGKNSLSSEQR 1133

Query: 107  PDLKEILSW--------KGVMKDERLDLMKEEM---PDLKEILP 139
            P  K++ S         +  + +E++ + ++E     +L+EI P
Sbjct: 1134 PSPKQLTSLGSEKSVKDQNFLSEEKVVVGEDEFTKDTELQEIFP 1177


>sp|Q4UNE0|SCA2_RICFE Putative surface cell antigen sca2 OS=Rickettsia felis (strain ATCC
           VR-1525 / URRWXCal2) GN=sca2 PE=3 SV=1
          Length = 1604

 Score = 30.0 bits (66), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 105 EKPDLKEILSWKGVMKDERLDLMKEEMPD-LKEILPWKGVMKDGRLDLMKEEMPDLKEIL 163
           EK +++++++ K + + + LD++  + P+ LK +L  K ++++ +L+    E+ DLKEI+
Sbjct: 844 EKIEIQQLIANKDISRKDLLDILNNKNPELLKSLLEAKVILEENKLNNSANEV-DLKEII 902

Query: 164 P 164
           P
Sbjct: 903 P 903


>sp|A3LZ57|SEC16_PICST COPII coat assembly protein SEC16 OS=Scheffersomyces stipitis
           (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
           Y-11545) GN=SEC16 PE=3 SV=2
          Length = 2212

 Score = 30.0 bits (66), Expect = 7.1,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 20/148 (13%)

Query: 15  EEKPD-LNEILPWKGVMKEEKPDLMKEGMPDLMQNER----PDLMQNKRLDLMKEENPDL 69
           EE+P  +  +LPW     EEKPD + +    L   ER    P+      L   ++ N + 
Sbjct: 244 EEQPQKVEHVLPW-----EEKPDEVSQKDEALPWEERRVEHPEQAAESTLPWEEQPNVEE 298

Query: 70  MREEKPDLMKNERPDLMKEEMPDLMKEEKPDLMKEEKPDLKEILSWKGVMKDERLDLMKE 129
            +  +P L   ERP++ +  +P    EEK      E    +  L W+   + E   L+ E
Sbjct: 299 FQAHEPALPWEERPEVEESSLP---WEEKVG----ESQGQEAALPWEEQQEVEVSSLLLE 351

Query: 130 EMPDLKEILPWKGVMKDGRLDLMKEEMP 157
           E    +  LPW+G  ++G     + ++P
Sbjct: 352 EKVR-ESSLPWEG--EEGESQAQESKLP 376


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.311    0.135    0.394 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,839,315
Number of Sequences: 539616
Number of extensions: 3481117
Number of successful extensions: 13985
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 396
Number of HSP's that attempted gapping in prelim test: 12131
Number of HSP's gapped (non-prelim): 1314
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 56 (26.2 bits)