Query psy2697
Match_columns 165
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Fri Aug 16 22:54:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2697.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2697hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kr7a_ a.1.1.4 (A:) Nerve tis 13.9 33 0.0024 20.9 1.3 30 113-143 2-31 (110)
2 d1x74a1 c.123.1.1 (A:2-360) 2- 10.3 34 0.0025 23.7 0.5 26 45-70 79-106 (359)
3 d2okqa1 d.58.4.18 (A:1-117) Hy 9.2 33 0.0024 23.6 0.1 18 115-132 83-100 (117)
4 d3cr5x1 a.39.1.2 (X:0-89) Calc 7.8 56 0.0041 20.2 0.8 20 85-104 28-47 (90)
5 d1xk4c1 a.39.1.2 (C:4-86) Calc 7.1 79 0.0058 19.3 1.2 20 85-104 29-48 (83)
6 d1xk7a1 c.123.1.1 (A:4-405) Cr 6.9 56 0.0041 22.8 0.4 27 45-71 89-117 (402)
7 d1e8aa_ a.39.1.2 (A:) Calcycli 6.2 70 0.0051 19.3 0.6 20 85-104 27-46 (87)
8 d1kqfb2 f.23.22.1 (B:246-290) 5.6 61 0.0044 19.1 -0.0 9 113-121 6-14 (45)
9 d2vjma1 c.123.1.1 (A:2-428) Fo 5.2 81 0.0059 22.0 0.5 26 45-70 92-119 (427)
10 d1qkia2 d.81.1.5 (A:200-434,A: 5.2 50 0.0037 24.5 -0.7 32 52-83 59-98 (297)
No 1
>d1kr7a_ a.1.1.4 (A:) Nerve tissue mini-hemoglobin (neural globin) {Milky ribbon-worm (Cerebratulus lacteus) [TaxId: 6221]}
Probab=13.91 E-value=33 Score=20.92 Aligned_cols=30 Identities=23% Similarity=0.541 Sum_probs=23.0
Q ss_pred hhhcccchhhhhhhhhhhcCCchhccccccc
Q psy2697 113 LSWKGVMKDERLDLMKEEMPDLKEILPWKGV 143 (165)
Q Consensus 113 lswkgvmkderldlmkeempdlkeilpwkgv 143 (165)
.||..|.+|- ..-+-++.|+.+...|.+|+
T Consensus 2 ~swa~v~~~f-f~~LF~~~Pe~~~~F~f~~~ 31 (110)
T d1kr7a_ 2 VNWAAVVDDF-YQELFKAHPEYQNKFGFKGV 31 (110)
T ss_dssp CCHHHHHHHH-HHHHHHHCGGGGGGSTTTTC
T ss_pred CCHHHHHHHH-HHHHHHHChHHHHHCCcccc
Confidence 5898887763 44455788999999998876
No 2
>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=10.33 E-value=34 Score=23.69 Aligned_cols=26 Identities=23% Similarity=0.348 Sum_probs=18.9
Q ss_pred hhhccccchhhhhhhh--hhhhcCccch
Q psy2697 45 LMQNERPDLMQNKRLD--LMKEENPDLM 70 (165)
Q Consensus 45 lmqnerpdlmqnkrld--lmkeenpdlm 70 (165)
+++|.||..|..--|| -+++.||+|.
T Consensus 79 ~i~n~~pg~~~~lgl~~~~l~~~nP~lI 106 (359)
T d1x74a1 79 LIEGYRPGVTERLGLGPEECAKVNDRLI 106 (359)
T ss_dssp EEECSCTTHHHHHTCSHHHHHHHCTTCE
T ss_pred EEecCCCCchhhcCCCHHHHHhhcCCce
Confidence 4678888888766653 4778888875
No 3
>d2okqa1 d.58.4.18 (A:1-117) Hypothetical protein YbaA {Shigella flexneri [TaxId: 623]}
Probab=9.24 E-value=33 Score=23.56 Aligned_cols=18 Identities=33% Similarity=0.527 Sum_probs=13.9
Q ss_pred hcccchhhhhhhhhhhcC
Q psy2697 115 WKGVMKDERLDLMKEEMP 132 (165)
Q Consensus 115 wkgvmkderldlmkeemp 132 (165)
|+-||.|.|+.-+-+.||
T Consensus 83 ~~kvm~Dprm~~~~~~mP 100 (117)
T d2okqa1 83 NQKMMSDPRMKEFGESMP 100 (117)
T ss_dssp HHHHHTCHHHHHTTSSCS
T ss_pred HHHHhhCccccccCCCCC
Confidence 467899999877766676
No 4
>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}
Probab=7.84 E-value=56 Score=20.21 Aligned_cols=20 Identities=30% Similarity=0.577 Sum_probs=11.8
Q ss_pred chhhhchhhhhhcCccchhc
Q psy2697 85 LMKEEMPDLMKEEKPDLMKE 104 (165)
Q Consensus 85 lmkeempdlmkeekpdlmke 104 (165)
|-|.|+-.||+.|=|.+++.
T Consensus 28 Lsk~Elk~Ll~~El~~~l~~ 47 (90)
T d3cr5x1 28 LKKSELKELINNELSHFLEE 47 (90)
T ss_dssp BCHHHHHHHHHHHCTTTSCC
T ss_pred CCHHHHHHHHHHHHHHHhcC
Confidence 55566666666666665553
No 5
>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}
Probab=7.07 E-value=79 Score=19.29 Aligned_cols=20 Identities=20% Similarity=0.519 Sum_probs=11.5
Q ss_pred chhhhchhhhhhcCccchhc
Q psy2697 85 LMKEEMPDLMKEEKPDLMKE 104 (165)
Q Consensus 85 lmkeempdlmkeekpdlmke 104 (165)
|-|.|+-.|++.|=|..++.
T Consensus 29 Lsk~Elk~Ll~~El~~~l~~ 48 (83)
T d1xk4c1 29 LNQGEFKELVRKDLQNFLKK 48 (83)
T ss_dssp BCHHHHHHHHHHHTTTTTTT
T ss_pred CCHHHHHHHHHHHhHHHhcC
Confidence 45556666666666665544
No 6
>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}
Probab=6.86 E-value=56 Score=22.84 Aligned_cols=27 Identities=11% Similarity=0.369 Sum_probs=19.6
Q ss_pred hhhccccchhhhhhhh--hhhhcCccchh
Q psy2697 45 LMQNERPDLMQNKRLD--LMKEENPDLMR 71 (165)
Q Consensus 45 lmqnerpdlmqnkrld--lmkeenpdlmr 71 (165)
+++|.||..|..-.|+ -+++.||+|.-
T Consensus 89 ~i~n~rpg~~~~lGl~~~~L~~~nP~lI~ 117 (402)
T d1xk7a1 89 FIEASKGPAFARRGITDEVLWQHNPKLVI 117 (402)
T ss_dssp EEEECSSSHHHHTTCCHHHHHHHCTTCEE
T ss_pred ceeeecccccccccccccchhhccccccc
Confidence 5678888888766665 56778888764
No 7
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}
Probab=6.18 E-value=70 Score=19.34 Aligned_cols=20 Identities=30% Similarity=0.486 Sum_probs=13.2
Q ss_pred chhhhchhhhhhcCccchhc
Q psy2697 85 LMKEEMPDLMKEEKPDLMKE 104 (165)
Q Consensus 85 lmkeempdlmkeekpdlmke 104 (165)
|-+.|+-.+|+.+-|..++.
T Consensus 27 Lsk~Elk~ll~~e~~~~~~~ 46 (87)
T d1e8aa_ 27 LSKGELKQLLTKELANTIKN 46 (87)
T ss_dssp ECHHHHHHHHHHHSTTTSTT
T ss_pred EcHHHHHHHHHHHccccccC
Confidence 56667777777666666554
No 8
>d1kqfb2 f.23.22.1 (B:246-290) Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor {Escherichia coli [TaxId: 562]}
Probab=5.57 E-value=61 Score=19.07 Aligned_cols=9 Identities=44% Similarity=0.933 Sum_probs=6.4
Q ss_pred hhhcccchh
Q psy2697 113 LSWKGVMKD 121 (165)
Q Consensus 113 lswkgvmkd 121 (165)
--|||+.|-
T Consensus 6 ~lWKgv~Kp 14 (45)
T d1kqfb2 6 SLWKGALKP 14 (45)
T ss_dssp HHHHTTHHH
T ss_pred HHhhhhHHH
Confidence 348888875
No 9
>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]}
Probab=5.23 E-value=81 Score=22.00 Aligned_cols=26 Identities=19% Similarity=0.454 Sum_probs=20.0
Q ss_pred hhhccccchhhhhhhh--hhhhcCccch
Q psy2697 45 LMQNERPDLMQNKRLD--LMKEENPDLM 70 (165)
Q Consensus 45 lmqnerpdlmqnkrld--lmkeenpdlm 70 (165)
+++|.||..+..-.|| -+++-||+|.
T Consensus 92 ~i~n~~pg~~~rlGL~~~~l~~~NP~LI 119 (427)
T d2vjma1 92 MVENFGPGALDRMGFTWEYIQELNPRVI 119 (427)
T ss_dssp EEECCSTTHHHHTTCCHHHHHHHCTTCE
T ss_pred eeECCCcchHHHcCCCchhhhhhCCccc
Confidence 5688899988766654 5788899885
No 10
>d1qkia2 d.81.1.5 (A:200-434,A:450-511) Glucose 6-phosphate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.20 E-value=50 Score=24.51 Aligned_cols=32 Identities=34% Similarity=0.475 Sum_probs=22.0
Q ss_pred chhhhhhhhhhh--------hcCccchhhcCcccccccCc
Q psy2697 52 DLMQNKRLDLMK--------EENPDLMREEKPDLMKNERP 83 (165)
Q Consensus 52 dlmqnkrldlmk--------eenpdlmreekpdlmknerp 83 (165)
|.+||-=|.++. .-+++-+|.||-.+++.-||
T Consensus 59 DmvQNHllQll~lvaME~P~~~~~~~ir~eK~kvL~alr~ 98 (297)
T d1qkia2 59 DVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISE 98 (297)
T ss_dssp HTTTTHHHHHHHHHHCCCCSSSCHHHHHHHHHHHHTTBCC
T ss_pred HHHHHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHhhcCc
Confidence 445555554442 45778889999998888776
Done!