BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy2705
         (203 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5BEN5|STU1_EMENI Protein stu1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
           CBS 112.46 / NRRL 194 / M139) GN=stu1 PE=3 SV=2
          Length = 1261

 Score = 36.6 bits (83), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 21  MEEEKQELLDLMKDERYDLMKNEKPDLMKEERLDLMKEEKLDWMKNEKRDLMKEEKPDLM 80
           + E   E +D M DER +   +E  D   +ER+D M  EK+D   +E+ D   +EK D  
Sbjct: 841 VNETVYETVDEMVDERANERVDEYFDEHVDERIDEMVREKVDEKVDEEVDEKVDEKVDEK 900

Query: 81  KEKKPDLKEIPPWKGVMKDERYDLMKNEKPDLMKDEKL 118
            ++K D K          DE+ D   NEK D   D+ L
Sbjct: 901 VDEKVDEK-----ADEKVDEKVDEKVNEKVDSAADDNL 933



 Score = 32.7 bits (73), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 16  EMPDLMEEEK-QELLDLMKDERYDLMKNEKPDLMKEERLDLMKEEKLDWMKNEKRDLMKE 74
           EM D    E+  E  D   DER D M  EK D   +E +D   +EK+D   +EK D   +
Sbjct: 851 EMVDERANERVDEYFDEHVDERIDEMVREKVDEKVDEEVDEKVDEKVDEKVDEKVDEKAD 910

Query: 75  EKPDLMKEKKPDLK 88
           EK D   ++K + K
Sbjct: 911 EKVDEKVDEKVNEK 924



 Score = 32.0 bits (71), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 9/103 (8%)

Query: 43  EKPDLMKEERLDLMKEEKLDWMKNEKRDLMKEEKPDLMKEKKPDLKEIPPWKGVMKDERY 102
           E  D   + R D + +EK++    E  D M +E+ +         + +  +     DER 
Sbjct: 823 EMDDKNYDGRADEIVQEKVNETVYETVDEMVDERAN---------ERVDEYFDEHVDERI 873

Query: 103 DLMKNEKPDLMKDEKLDLMENEMPDLMKDEKHDLVKDEKPDLK 145
           D M  EK D   DE++D   +E  D   DEK D   DEK D K
Sbjct: 874 DEMVREKVDEKVDEEVDEKVDEKVDEKVDEKVDEKADEKVDEK 916


>sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2
          Length = 3198

 Score = 34.3 bits (77), Expect = 0.52,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 13/147 (8%)

Query: 41  KNEKPDLMKEERLDLMKEEKLDWMKNEKRDLMKEEKPDLMKEKKPD----LKEIPPW--- 93
           K E  D  + E      EE +   + +  D+ KEE   L KE + D    L ++PP    
Sbjct: 653 KRESDDDFRPESGSEDDEETIAKAEEDAADV-KEEVTALAKESEMDFDDFLNDLPPGYLE 711

Query: 94  --KGVMKDERYDLMKNEKPDLMKDEKLDLMENEMPD---LMKDEKHDLVKDEKPDLKEIL 148
               +MK+E+   +K E PD   D + +  E    D   + K E+ +   D K ++ E+ 
Sbjct: 712 NRDKLMKEEQSSAIKTETPDDSDDSEFEAKEASDDDENTISKQEEAEQEIDHKKEIDELE 771

Query: 149 PWNGVMKDERYDLMKNEKPDLMKEERL 175
             N +  ++     K+E+P   K  +L
Sbjct: 772 ADNDLSVEQLLAKYKSEQPPSPKRRKL 798


>sp|C6KTD2|HKNMT_PLAF7 Putative histone-lysine N-methyltransferase PFF1440w OS=Plasmodium
            falciparum (isolate 3D7) GN=PFF1440w PE=3 SV=1
          Length = 6753

 Score = 32.0 bits (71), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/87 (21%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 115  DEKLDLMEN----EMPDLMKDEKHDLVKDEKPDLKEILPWNGVMKDERYDLMKNEKPDLM 170
            +EK +LMEN    +  D++ ++  D++ ++  D+      + ++ ++  D++ N+  D++
Sbjct: 4347 NEKENLMENVTNDKTSDIINNKTSDIINNKTSDIIN-NKTSDIINNKTSDIINNKTSDII 4405

Query: 171  KEERLDLIQDKKYGLIKER-PDLLEIL 196
              +  D+I DK   +I  +  D L ++
Sbjct: 4406 NNKTSDIINDKTNDIINNKTSDCLSLV 4432


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.135    0.386 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,612,989
Number of Sequences: 539616
Number of extensions: 4144405
Number of successful extensions: 20718
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 707
Number of HSP's that attempted gapping in prelim test: 17274
Number of HSP's gapped (non-prelim): 2495
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)