Query psy2709
Match_columns 295
No_of_seqs 298 out of 2005
Neff 5.8
Searched_HMMs 46136
Date Fri Aug 16 23:12:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2709.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2709hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0234|consensus 100.0 1E-45 2.2E-50 359.0 20.0 219 3-258 206-437 (438)
2 PTZ00322 6-phosphofructo-2-kin 100.0 9.7E-42 2.1E-46 351.0 21.7 218 3-254 387-641 (664)
3 PRK13463 phosphatase PhoE; Pro 100.0 2.7E-33 5.8E-38 249.1 17.2 155 35-210 1-173 (203)
4 PRK15004 alpha-ribazole phosph 100.0 6.1E-33 1.3E-37 245.4 17.7 155 37-212 1-173 (199)
5 PRK14116 gpmA phosphoglyceromu 100.0 6.1E-33 1.3E-37 251.7 17.8 156 36-212 1-206 (228)
6 PRK01112 phosphoglyceromutase; 100.0 1.6E-32 3.5E-37 249.5 17.7 156 36-212 1-205 (228)
7 PRK14117 gpmA phosphoglyceromu 100.0 3.8E-32 8.3E-37 246.9 18.6 156 36-212 1-206 (230)
8 PRK14119 gpmA phosphoglyceromu 100.0 3.4E-32 7.3E-37 246.4 18.0 156 36-212 1-206 (228)
9 COG0406 phoE Broad specificity 100.0 7.1E-32 1.5E-36 238.8 17.8 157 35-212 1-177 (208)
10 PRK14118 gpmA phosphoglyceromu 100.0 6.6E-32 1.4E-36 244.7 17.9 155 37-212 1-205 (227)
11 PRK01295 phosphoglyceromutase; 100.0 5.6E-32 1.2E-36 241.9 15.9 157 35-212 1-182 (206)
12 PRK03482 phosphoglycerate muta 100.0 3.8E-31 8.2E-36 236.3 17.8 168 36-236 1-186 (215)
13 PRK14120 gpmA phosphoglyceromu 100.0 5.5E-31 1.2E-35 242.5 19.3 158 34-212 2-207 (249)
14 TIGR03848 MSMEG_4193 probable 100.0 5.6E-31 1.2E-35 233.5 18.6 152 38-212 1-176 (204)
15 PRK13462 acid phosphatase; Pro 100.0 7E-31 1.5E-35 234.5 19.1 151 35-212 4-171 (203)
16 TIGR03162 ribazole_cobC alpha- 100.0 2.3E-31 5.1E-36 229.4 14.9 151 39-212 1-169 (177)
17 TIGR01258 pgm_1 phosphoglycera 100.0 1.9E-30 4.2E-35 238.2 19.7 155 37-212 1-205 (245)
18 PRK14115 gpmA phosphoglyceromu 100.0 3.5E-30 7.6E-35 236.8 19.2 155 37-212 1-205 (247)
19 PRK07238 bifunctional RNase H/ 100.0 5.2E-29 1.1E-33 240.1 19.5 158 33-212 168-344 (372)
20 PF00300 His_Phos_1: Histidine 99.9 9.4E-28 2E-32 200.1 10.0 131 38-168 1-152 (158)
21 smart00855 PGAM Phosphoglycera 99.9 8.8E-27 1.9E-31 197.1 12.7 127 38-168 1-149 (155)
22 KOG0235|consensus 99.9 1.6E-25 3.5E-30 201.9 14.6 157 35-212 4-188 (214)
23 PTZ00123 phosphoglycerate muta 99.9 7.6E-26 1.7E-30 206.3 12.2 172 49-253 1-228 (236)
24 COG0588 GpmA Phosphoglycerate 99.9 1.2E-24 2.5E-29 194.9 14.2 162 36-222 1-212 (230)
25 PTZ00122 phosphoglycerate muta 99.8 1E-18 2.3E-23 165.1 14.8 131 37-212 103-264 (299)
26 cd07067 HP_PGM_like Histidine 99.8 2.2E-18 4.7E-23 144.6 12.6 110 38-212 1-131 (153)
27 cd07040 HP Histidine phosphata 99.7 1.8E-15 3.8E-20 125.6 12.7 113 38-212 1-131 (153)
28 KOG4754|consensus 99.6 3.5E-14 7.7E-19 127.6 13.7 144 36-197 14-200 (248)
29 PRK06193 hypothetical protein; 99.5 6.5E-14 1.4E-18 126.2 11.9 116 35-197 41-175 (206)
30 TIGR00249 sixA phosphohistidin 99.5 4.3E-13 9.4E-18 114.9 15.5 107 37-197 1-120 (152)
31 COG2062 SixA Phosphohistidine 99.4 4.5E-12 9.6E-17 110.5 13.2 59 36-94 1-70 (163)
32 PRK10848 phosphohistidine phos 99.4 1.4E-11 3E-16 106.5 15.7 54 37-92 1-65 (159)
33 PRK15416 lipopolysaccharide co 99.4 3.2E-12 6.8E-17 114.9 10.3 79 22-103 43-134 (201)
34 KOG3734|consensus 99.3 1.2E-11 2.5E-16 115.4 11.8 146 33-197 9-214 (272)
35 KOG4609|consensus 99.3 1.1E-11 2.3E-16 112.0 10.1 132 35-212 93-249 (284)
36 PF01591 6PF2K: 6-phosphofruct 96.9 0.0012 2.7E-08 60.4 4.5 47 169-215 148-194 (222)
37 cd07061 HP_HAP_like Histidine 96.7 0.0023 5.1E-08 57.8 5.1 47 37-92 4-71 (242)
38 PF00328 His_Phos_2: Histidine 95.8 0.02 4.2E-07 53.1 6.2 35 58-92 60-114 (347)
39 KOG0234|consensus 92.4 0.16 3.5E-06 50.8 4.4 55 160-215 157-211 (438)
40 KOG3720|consensus 89.2 0.8 1.7E-05 45.6 6.0 55 38-92 37-125 (411)
41 PRK10173 glucose-1-phosphatase 88.5 1.2 2.7E-05 44.3 6.8 56 37-92 33-126 (413)
42 PRK10172 phosphoanhydride phos 88.3 4.7 0.0001 40.7 10.7 55 38-92 37-128 (436)
43 PRK00035 hemH ferrochelatase; 50.0 1.7E+02 0.0036 27.9 10.3 25 54-78 65-89 (333)
44 TIGR00824 EIIA-man PTS system, 40.2 45 0.00098 27.1 4.1 33 135-167 34-66 (116)
45 PRK10481 hypothetical protein; 36.0 58 0.0013 30.0 4.5 69 104-178 33-107 (224)
46 KOG1057|consensus 35.8 33 0.00072 37.3 3.1 34 59-92 510-569 (1018)
47 PF12048 DUF3530: Protein of u 32.7 1.4E+02 0.0031 28.5 6.7 37 143-197 174-212 (310)
48 COG1245 Predicted ATPase, RNas 32.4 66 0.0014 33.3 4.5 66 112-186 215-283 (591)
49 PF03610 EIIA-man: PTS system 25.4 99 0.0022 24.6 3.7 33 135-167 33-65 (116)
50 cd07397 MPP_DevT Myxococcus xa 24.6 1.7E+02 0.0038 27.1 5.6 52 139-190 126-189 (238)
51 PF14606 Lipase_GDSL_3: GDSL-l 24.2 1.9E+02 0.004 25.8 5.5 58 140-197 71-132 (178)
52 COG1117 PstB ABC-type phosphat 24.2 1.2E+02 0.0025 28.5 4.3 23 146-168 185-207 (253)
53 PRK09191 two-component respons 22.7 3.1E+02 0.0068 24.0 6.8 30 139-168 115-146 (261)
54 PF10655 DUF2482: Hypothetical 20.3 1.6E+02 0.0034 23.8 3.7 34 170-203 2-35 (100)
No 1
>KOG0234|consensus
Probab=100.00 E-value=1e-45 Score=359.03 Aligned_cols=219 Identities=47% Similarity=0.786 Sum_probs=211.4
Q ss_pred eeEEecCceEEEeecccchhhhHHHHHhcCCCCCcEEEEEcCCcCccccCCccCCCCCCCHHHHHHHHHHHHHHHHH---
Q psy2709 3 VYSVIAGENMNVRFIDGPLQSEVLSYISNFRPTPKTFYFSRHGESEFNVLGRIGGDADLSPRGRLYAAALARHFNEA--- 79 (295)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~l~s~~~~~l~n~~~~~~~iylvRHGes~~n~~~~~~gD~~Lt~~G~~qA~~la~~l~~~--- 79 (295)
||+||+|+.+++|++.||++|+++|||||++..+++|||+|||||++|+.|+++||.+|+++|.++|+.+++++.+.
T Consensus 206 ik~in~g~~~~~~~i~~~l~srivy~lmN~~~~pR~i~l~r~geS~~n~~griggds~ls~~g~~ya~~l~~f~~~~~~~ 285 (438)
T KOG0234|consen 206 IKIINVGEEIVVHNIEGYLQSRIVYYLMNIHTTPRTIYLTRHGESEFNVEGRIGGDSPLSERGSQYAKSLIKFVEEQSSS 285 (438)
T ss_pred EEEecccceEEEecccceehhhhhhhhhccccCCceEEEEecCCCccccccccCCcccccHHHHHHHHHHHHHHhhhccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred --------HHHHHHHHHHHhhcc--cccccccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHH
Q psy2709 80 --------ARRTKQTVAGIHATS--EAIPALNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRI 149 (295)
Q Consensus 80 --------l~Ra~qTA~~i~~~~--~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri 149 (295)
+.||+|||+.+..+. ..+..|+|+++|.|+|++++|+.+.||+++..+..|+++|+||+||||.|+.+|+
T Consensus 286 dl~vwts~~~rti~ta~~l~~~~~~~~~~~Ldei~ag~~~g~t~eeI~~~~p~e~~~r~~dky~yry~~gESy~D~v~Rl 365 (438)
T KOG0234|consen 286 DLDVWTSQRKRTIQTAEGLKLDYSVEQWKALDEIDAGVCEGLTYEEIETNYPEEFALRDKDKYRYRYPGGESYSDLVQRL 365 (438)
T ss_pred CceeccchHHHHhhhHhhcCcchhhhhHhhcCcccccccccccHHHHHHhCchhhhhccCCcceeecCCCCCHHHHHHhh
Confidence 999999999766544 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEEEcCCCCCCCccccccee
Q psy2709 150 RPVLLELEREDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKVYDGENTTSPLALSTYTY 229 (295)
Q Consensus 150 ~~~l~~l~~~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i~~~~~~~~P~sls~~~~ 229 (295)
+|+|++|+++.+|+||||. .+|||++++|+ +.+..+++++.+ |+ +
T Consensus 366 ePvImElEr~~~Vlvi~Hq------------------avircll~Yf~---~~~~~e~p~l~~--------pl------h 410 (438)
T KOG0234|consen 366 EPVIMELERQENVLVITHQ------------------AVIRCLLAYFL---NCSPVELPYLTV--------PL------H 410 (438)
T ss_pred hhHhHhhhhcccEEEEecH------------------HHHHHHHHHHh---cCCHhhcccccc--------cc------e
Confidence 9999999999889999999 99999999999 999999999999 99 9
Q ss_pred EEEEEEeccCCceEEEEeccccccccccc
Q psy2709 230 TIIKLTTSGYKTHMEIIKLNIACVDTYRQ 258 (295)
Q Consensus 230 ~i~~l~~~~~~~~~~~~~l~~~~v~t~r~ 258 (295)
+|++|++..||+.++++++++++ +| |.
T Consensus 411 tv~~l~~~~y~~~~e~~~~~~~a-~t-r~ 437 (438)
T KOG0234|consen 411 TVIKLTPDAYGTTVESIRLNDTA-NT-RL 437 (438)
T ss_pred eEEEEeeccccceeEEeeccccc-cc-cC
Confidence 99999999999999999999988 66 64
No 2
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=100.00 E-value=9.7e-42 Score=351.04 Aligned_cols=218 Identities=25% Similarity=0.433 Sum_probs=196.3
Q ss_pred eeEEecCceEEEeecccchhhhHHHHHhcCCCCCcEEEEEcCCcCccccCCccCCCCCCCHHHHHHHHHHHHHHHHH---
Q psy2709 3 VYSVIAGENMNVRFIDGPLQSEVLSYISNFRPTPKTFYFSRHGESEFNVLGRIGGDADLSPRGRLYAAALARHFNEA--- 79 (295)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~l~s~~~~~l~n~~~~~~~iylvRHGes~~n~~~~~~gD~~Lt~~G~~qA~~la~~l~~~--- 79 (295)
||+ +.|++|.+|+|+|||+|||+|||||+++.+|+|||+|||||.+|..++++||.|||++|++||++++++|...
T Consensus 387 ik~-~~g~~~~~~~i~g~l~~~i~~~l~n~~~~~m~i~LiRHGeT~~n~~~r~~Gd~pLt~~G~~qA~~l~~~l~~~~~~ 465 (664)
T PTZ00322 387 IRI-EDTQTFSLNNISGWMPSRLAYMLHNLNPTPMNLYLTRAGEYVDLLSGRIGGNSRLTERGRAYSRALFEYFQKEIST 465 (664)
T ss_pred EEE-ecCcEEEEeccccccchhhheeeeeeccCCceEEEEecccchhhhcCccCCCCccCHHHHHHHHHHHHHHHhccCC
Confidence 675 5599999999999999999999999999999999999999999999999999999999999999999998752
Q ss_pred ---------HHHHHHHHHHHhh---------------------cccccccccccCCCccCCCCHHHHHhhChHHHHhhhh
Q psy2709 80 ---------ARRTKQTVAGIHA---------------------TSEAIPALNELDAGVCEGYSYEEMQDKFPQEFAWRDQ 129 (295)
Q Consensus 80 ---------l~Ra~qTA~~i~~---------------------~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~ 129 (295)
++||+|||+.|.. ++..++.|+|+++|.|||++++|+.+++|+.+..|..
T Consensus 466 ~~~~V~sSpl~Ra~~TA~~i~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~~ 545 (664)
T PTZ00322 466 TSFTVMSSCAKRCTETVHYFAEESILQQSTASAASSQSPSLNCRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMKA 545 (664)
T ss_pred CCcEEEcCCcHHHHHHHHHHHhccccccccccccccccccccccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHHh
Confidence 9999999998863 3567899999999999999999999999999999999
Q ss_pred CcccCCCCCCCCHHHHH-HHHHHHHHHHHcC-CeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCC--cccc
Q psy2709 130 DKLRYRYPWGESYVDIM-QRIRPVLLELERE-DNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINP--KLEA 205 (295)
Q Consensus 130 d~~~~~~p~gES~~d~~-~Ri~~~l~~l~~~-~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~--~~~~ 205 (295)
+++.+++|+|||+.|+. +|+.+++.++.+. ++||||||| ++|+++++++++.++ .+..
T Consensus 546 d~~~~~~P~GES~~d~~~~R~~~~i~~l~~~~~~ilvVsHg------------------~vir~ll~~~~~~~~~~~~~~ 607 (664)
T PTZ00322 546 DPYYTAWPNGECIHQVFNARLEPHIHDIQASTTPVLVVSHL------------------HLLQGLYSYFVTDGDNIVAPQ 607 (664)
T ss_pred CCCcCCCCCCcCHHHHHHHHHHHHHHHHHccCCCEEEEeCc------------------HHHHHHHHHHhcCCccccCcc
Confidence 99999999999999976 7999999999766 899999999 999999999993210 3567
Q ss_pred cccceEEEcCCCCCCCcccccceeEEEEEEeccCCceEEEEeccccccc
Q psy2709 206 RYSYVKVYDGENTTSPLALSTYTYTIIKLTTSGYKTHMEIIKLNIACVD 254 (295)
Q Consensus 206 ~~~~l~i~~~~~~~~P~sls~~~~~i~~l~~~~~~~~~~~~~l~~~~v~ 254 (295)
..+.+.+ |. ++++++...+++...+.+.+. +.|+
T Consensus 608 ~~~~~~i--------~~------~~~~~i~~~~~~~~~~~~~l~-~~~~ 641 (664)
T PTZ00322 608 NAYKIDI--------PF------EHVIKIRMVGFNRVAELIDLS-KEVD 641 (664)
T ss_pred cCceeec--------cC------CcEEEEEEeccCceEEEEech-HHHH
Confidence 7788888 87 899999999999999998887 4443
No 3
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=2.7e-33 Score=249.12 Aligned_cols=155 Identities=20% Similarity=0.316 Sum_probs=141.6
Q ss_pred CCcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHhh----ccccccc
Q psy2709 35 TPKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA---------ARRTKQTVAGIHA----TSEAIPA 99 (295)
Q Consensus 35 ~~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~---------l~Ra~qTA~~i~~----~~~~~~~ 99 (295)
|+++||||||||+.+|..++++| |.|||++|++||+.+++.|... +.||+|||+.++. ++.++++
T Consensus 1 m~~~i~lvRHG~t~~n~~~~~~G~~d~~Lt~~G~~Qa~~~~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 80 (203)
T PRK13463 1 MKTTVYVTRHGETEWNVAKRMQGRKNSALTENGILQAKQLGERMKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEH 80 (203)
T ss_pred CceEEEEEeCCCCccchhCcccCCCCCCcCHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHHhcCCCCceECcC
Confidence 35799999999999999999998 9999999999999999999864 9999999999965 6789999
Q ss_pred ccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHcC---CeEEEEecCCCccccCC
Q psy2709 100 LNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELERE---DNLLVEMLQFNKDYKNM 176 (295)
Q Consensus 100 L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~~---~~vLvVsHg~~~~~~~~ 176 (295)
|+|+++|.|+|++.+++.+.||+.+..|..++..+.+|+|||+.++.+|+..++.++.+. ++|||||||
T Consensus 81 l~E~~~G~~eG~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg-------- 152 (203)
T PRK13463 81 FYEINMGIWEGQTIDDIERQYPDDIQLFWNEPHLFQSTSGENFEAVHKRVIEGMQLLLEKHKGESILIVSHA-------- 152 (203)
T ss_pred ceeCCCCccCCCcHHHHhhhCHHHHHHHHhChhccCCCCCeEHHHHHHHHHHHHHHHHHhCCCCEEEEEeCh--------
Confidence 999999999999999999999999987888888889999999999999999999998543 789999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhhhcCCcccccccce
Q psy2709 177 SEEKALDDFQHKMEHFLEVYETINPKLEARYSYV 210 (295)
Q Consensus 177 ~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l 210 (295)
++|++++++++ +.+...++.+
T Consensus 153 ----------~~ir~~~~~~~---~~~~~~~~~~ 173 (203)
T PRK13463 153 ----------AAAKLLVGHFA---GIEIENVWDD 173 (203)
T ss_pred ----------HHHHHHHHHHh---CCCHHHHhhc
Confidence 99999999999 8777766553
No 4
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=6.1e-33 Score=245.43 Aligned_cols=155 Identities=22% Similarity=0.233 Sum_probs=141.7
Q ss_pred cEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHhh----ccccccccc
Q psy2709 37 KTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA---------ARRTKQTVAGIHA----TSEAIPALN 101 (295)
Q Consensus 37 ~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~---------l~Ra~qTA~~i~~----~~~~~~~L~ 101 (295)
|+||||||||+.+|..++++| |.|||++|++||+++++.|... +.||+|||++|+. ++.++++|+
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~d~pLt~~G~~Qa~~~~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~ 80 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLRDVPFDLVLCSELERAQHTARLVLSDRQLPVHIIPELN 80 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCCCCCcCHHHHHHHHHHHHHHhCCCCCEEEECchHHHHHHHHHHHhcCCCCceeChhhe
Confidence 579999999999999999988 9999999999999999999865 9999999999976 678999999
Q ss_pred ccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHcC---CeEEEEecCCCccccCCcH
Q psy2709 102 ELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELERE---DNLLVEMLQFNKDYKNMSE 178 (295)
Q Consensus 102 E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~~---~~vLvVsHg~~~~~~~~~~ 178 (295)
|+++|.|+|++.+++..++|+.+..|..++....+|+|||+.|+.+|+..+++++.+. ++|||||||
T Consensus 81 E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~Rv~~~l~~l~~~~~~~~iliVsHg---------- 150 (199)
T PRK15004 81 EMFFGDWEMRHHRDLMQEDAENYAAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSAFQHYQNLLIVSHQ---------- 150 (199)
T ss_pred eCCCcccCCCCHHHHHHHCHHHHHHHHhChhhcCCCCCcCHHHHHHHHHHHHHHHHHhCCCCeEEEEcCh----------
Confidence 9999999999999999999999887777777778899999999999999999999753 789999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 179 EKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 179 ~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++|++++++++ +.+...++.+.+
T Consensus 151 --------~~i~~l~~~~~---~~~~~~~~~~~~ 173 (199)
T PRK15004 151 --------GVLSLLIARLL---GMPAEAMWHFRV 173 (199)
T ss_pred --------HHHHHHHHHHh---CCCHHHHhcccc
Confidence 99999999999 888777766655
No 5
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=6.1e-33 Score=251.66 Aligned_cols=156 Identities=21% Similarity=0.256 Sum_probs=135.4
Q ss_pred CcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------ccc
Q psy2709 36 PKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TSE 95 (295)
Q Consensus 36 ~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~~ 95 (295)
|++|||||||||.+|..++++| |.|||++|++||+++|+.|... +.||+|||++|++ ++.
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~~~~~~ 80 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWVDVDLSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYALEESDQLWIPET 80 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCcCCCCcc
Confidence 4689999999999999999999 9999999999999999999752 9999999999963 456
Q ss_pred ccccccccCCCccCCCCHHHHHhhChHH-HHhhhhC------------------------cccCCCCCCCCHHHHHHHHH
Q psy2709 96 AIPALNELDAGVCEGYSYEEMQDKFPQE-FAWRDQD------------------------KLRYRYPWGESYVDIMQRIR 150 (295)
Q Consensus 96 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~d------------------------~~~~~~p~gES~~d~~~Ri~ 150 (295)
++++|+|+++|.|||++++|+.+++|+. +..|..+ ...+.+|+|||+.++.+|+.
T Consensus 81 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv~ 160 (228)
T PRK14116 81 KTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRIIPGGENLKVTLERVI 160 (228)
T ss_pred cCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccCCCCCCCHHHHHHHHH
Confidence 7899999999999999999999999986 4333322 11346899999999999999
Q ss_pred HHHHHHH-----cCCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 151 PVLLELE-----REDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 151 ~~l~~l~-----~~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++++++. ..++||||||| ++|++++++++ +.+...++.+.+
T Consensus 161 ~~l~~~i~~~~~~~~~vlvVsHg------------------~vir~ll~~~~---~~~~~~~~~~~~ 206 (228)
T PRK14116 161 PFWEDHIAPDLLDGKNVIIAAHG------------------NSLRALTKYIE---NISDEDIMNLEM 206 (228)
T ss_pred HHHHHHHHHhhcCCCeEEEEcCh------------------HHHHHHHHHHh---CCCHHHHHhccC
Confidence 9998853 13899999999 99999999999 888888887776
No 6
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.6e-32 Score=249.46 Aligned_cols=156 Identities=23% Similarity=0.196 Sum_probs=139.6
Q ss_pred CcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHhh------------
Q psy2709 36 PKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA---------ARRTKQTVAGIHA------------ 92 (295)
Q Consensus 36 ~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~---------l~Ra~qTA~~i~~------------ 92 (295)
|++||||||||+.+|..++++| |.+||+.|++||+++|++|... ++||+|||+.|..
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~D~~Lte~G~~Qa~~l~~~L~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~ 80 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWVDIPLSQQGIAEAIAAGEKIKDLPIDCIFTSTLVRSLMTALLAMTNHSSGKIPYIVH 80 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHhhcCCCCEEEEcCcHHHHHHHHHHHHhhcccccccccc
Confidence 4789999999999999999999 9999999999999999999875 9999999999862
Q ss_pred ---------------------cccccccccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHH
Q psy2709 93 ---------------------TSEAIPALNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRP 151 (295)
Q Consensus 93 ---------------------~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~ 151 (295)
++..+++|+|+++|.|+|++++|+.+++|+.+..++.+++.+++|+|||+.|+.+|+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~GES~~d~~~Rv~~ 160 (228)
T PRK01112 81 EEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVKLWRRSYKTAPPQGESLEDTGQRTLP 160 (228)
T ss_pred cccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHHHHhCcCCCCCCCCCCHHHHHHHHHH
Confidence 35567999999999999999999999999886655566677899999999999999999
Q ss_pred HHHHHH-----cCCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 152 VLLELE-----REDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 152 ~l~~l~-----~~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
+++++. ..++||||||| ++|++++++++ +.+.+.++.+.+
T Consensus 161 ~l~~~~~~~~~~~~~ilVVsHg------------------~vir~l~~~ll---~~~~~~~~~~~~ 205 (228)
T PRK01112 161 YFQNRILPHLQQGKNVFVSAHG------------------NSLRSLIMDLE---KLSEEEVLSLEL 205 (228)
T ss_pred HHHHHHHHHhcCCCeEEEEeCH------------------HHHHHHHHHHh---CCCHHHHhhccc
Confidence 998652 23799999999 99999999999 888888887766
No 7
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.8e-32 Score=246.86 Aligned_cols=156 Identities=22% Similarity=0.228 Sum_probs=133.8
Q ss_pred CcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------ccc
Q psy2709 36 PKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TSE 95 (295)
Q Consensus 36 ~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~~ 95 (295)
|++|||||||||++|..++++| |.|||++|++||+++|+.|.+. ++||+|||+++.. ++.
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~D~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~ 80 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLALEASDQLWVPVE 80 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCCEEEECCcHHHHHHHHHHHHhcccCCCCce
Confidence 4689999999999999999999 9999999999999999999752 9999999998852 567
Q ss_pred ccccccccCCCccCCCCHHHHHhhChHH-HHhhhhC------------------------cccCCCCCCCCHHHHHHHHH
Q psy2709 96 AIPALNELDAGVCEGYSYEEMQDKFPQE-FAWRDQD------------------------KLRYRYPWGESYVDIMQRIR 150 (295)
Q Consensus 96 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~d------------------------~~~~~~p~gES~~d~~~Ri~ 150 (295)
++++|+|+++|.|||++++|+.+++|+. +..|..+ ...+++|+|||+.++.+|+.
T Consensus 81 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~ 160 (230)
T PRK14117 81 KSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDSVIPDAENLKVTLERAL 160 (230)
T ss_pred eCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccCCCCCCCCHHHHHHHHH
Confidence 7899999999999999999999999986 3333221 12346799999999999999
Q ss_pred HHHHHHH--c---CCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 151 PVLLELE--R---EDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 151 ~~l~~l~--~---~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++++++. . .++||||||| ++|++++++++ +.+...++.+.+
T Consensus 161 ~~l~~~~~~~~~~~~~vlvVsHg------------------~~ir~ll~~~l---g~~~~~~~~~~~ 206 (230)
T PRK14117 161 PFWEDKIAPALKDGKNVFVGAHG------------------NSIRALVKHIK---GLSDDEIMDVEI 206 (230)
T ss_pred HHHHHHHHhhccCCCEEEEEeCh------------------HHHHHHHHHHh---CcCHHHHhhcCC
Confidence 9999863 2 3789999999 99999999999 877777666555
No 8
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.4e-32 Score=246.42 Aligned_cols=156 Identities=21% Similarity=0.253 Sum_probs=133.8
Q ss_pred CcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------ccc
Q psy2709 36 PKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TSE 95 (295)
Q Consensus 36 ~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~~ 95 (295)
|++|||||||||++|..++++| |.|||+.|++||+++++.|... ++||+|||++|++ ++.
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~~~~~~ 80 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVY 80 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEeCccHHHHHHHHHHHHhcccCCCCee
Confidence 4689999999999999999999 9999999999999999999752 9999999999964 567
Q ss_pred ccccccccCCCccCCCCHHHHHhhChHH-HHhhhhCcc------------------------cCCCCCCCCHHHHHHHHH
Q psy2709 96 AIPALNELDAGVCEGYSYEEMQDKFPQE-FAWRDQDKL------------------------RYRYPWGESYVDIMQRIR 150 (295)
Q Consensus 96 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~d~~------------------------~~~~p~gES~~d~~~Ri~ 150 (295)
.+++|+|+++|.|||++++|+.+++|+. +..|..+.. ...+|+|||+.++.+|+.
T Consensus 81 ~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~ 160 (228)
T PRK14119 81 KSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVI 160 (228)
T ss_pred ECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCcccccccccccccccccccccccCCCCCCHHHHHHHHH
Confidence 8899999999999999999999999986 334433211 124689999999999999
Q ss_pred HHHHHHHc-----CCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 151 PVLLELER-----EDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 151 ~~l~~l~~-----~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
+++.++.. .++||||||| ++|++++++++ +.+...++.+.+
T Consensus 161 ~~l~~~~~~~~~~~~~vlvVsHg------------------~vir~l~~~~~---~~~~~~~~~~~~ 206 (228)
T PRK14119 161 PFWTDHISQYLLDGQTVLVSAHG------------------NSIRALIKYLE---DVSDEDIINYEI 206 (228)
T ss_pred HHHHHHHHhhccCCCeEEEEeCh------------------HHHHHHHHHHh---CCCHHHHhhcCC
Confidence 99998632 3789999999 99999999999 888777776655
No 9
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=7.1e-32 Score=238.78 Aligned_cols=157 Identities=31% Similarity=0.396 Sum_probs=143.6
Q ss_pred CCcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh----ccccc
Q psy2709 35 TPKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA----TSEAI 97 (295)
Q Consensus 35 ~~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~----~~~~~ 97 (295)
++++||||||||+.+|..++++| |.|||+.|++||+++|+.|... +.||+|||+.+++ ++..+
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sS~l~Ra~~TA~~~a~~~~~~~~~~ 80 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQGWTDSPLTEEGRAQAEALAERLAARDIGFDAIYSSPLKRAQQTAEPLAEELGLPLEVD 80 (208)
T ss_pred CceEEEEEecCCccccccccccCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCEEEECchHHHHHHHHHHHHhcCCCceec
Confidence 46899999999999999999999 9999999999999999999952 9999999999987 55789
Q ss_pred ccccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHcC---CeEEEEecCCCcccc
Q psy2709 98 PALNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELERE---DNLLVEMLQFNKDYK 174 (295)
Q Consensus 98 ~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~~---~~vLvVsHg~~~~~~ 174 (295)
+.|+|+++|.|+|++.+++.+++|.++..|..++..+.+|+|||+.++..|+.+++.++.+. ++|||||||
T Consensus 81 ~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~~~~~~~~~~vlvVsHg------ 154 (208)
T COG0406 81 DRLREIDFGDWEGLTIDELAEEPPEELAAWLADPYLAPPPGGESLADVSKRVVAALAELLRSPPGNNVLVVSHG------ 154 (208)
T ss_pred CCeeEeecccccCCcHHHHHHhCHHHHHHHhcCccccCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEECh------
Confidence 99999999999999999999999999999999999999999999999999999999999875 369999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 175 NMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 175 ~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++|++++++++ +.+....+.+.+
T Consensus 155 ------------~~ir~l~~~~~---~~~~~~~~~~~~ 177 (208)
T COG0406 155 ------------GVIRALLAYLL---GLDLEELWRLRL 177 (208)
T ss_pred ------------HHHHHHHHHhc---CCChhhHHhcCC
Confidence 99999999999 666554455544
No 10
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=6.6e-32 Score=244.72 Aligned_cols=155 Identities=21% Similarity=0.222 Sum_probs=133.5
Q ss_pred cEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------cccc
Q psy2709 37 KTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TSEA 96 (295)
Q Consensus 37 ~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~~~ 96 (295)
|+|||||||||.+|..++++| |.|||+.|++||+++|+.|.+. +.||+|||+.|+. ++..
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~d~~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~~ 80 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKAAGKKLKEAGYEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQVK 80 (227)
T ss_pred CEEEEEecCCCccccccCcCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeChHHHHHHHHHHHHhcCCCCCCeec
Confidence 579999999999999999999 9999999999999999999852 9999999999964 4567
Q ss_pred cccccccCCCccCCCCHHHHHhhChHH-HHhhhhCc------------------------ccCCCCCCCCHHHHHHHHHH
Q psy2709 97 IPALNELDAGVCEGYSYEEMQDKFPQE-FAWRDQDK------------------------LRYRYPWGESYVDIMQRIRP 151 (295)
Q Consensus 97 ~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~d~------------------------~~~~~p~gES~~d~~~Ri~~ 151 (295)
+++|+|+++|.|||++++|+.+++|+. +..|..+. ....+|+|||+.++.+|+.+
T Consensus 81 ~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~ 160 (227)
T PRK14118 81 NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADVVPDAENLKVTLERVLP 160 (227)
T ss_pred CCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCCCCCCCCHHHHHHHHHH
Confidence 889999999999999999999999986 33333221 12457999999999999999
Q ss_pred HHHHHHc-----CCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 152 VLLELER-----EDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 152 ~l~~l~~-----~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
+++++.. .++||||||| ++|++++++++ +.+...++.+.+
T Consensus 161 ~l~~~~~~~~~~~~~vlvVsHg------------------gvir~ll~~~l---~~~~~~~~~~~i 205 (227)
T PRK14118 161 FWEDQIAPALLSGKRVLVAAHG------------------NSLRALAKHIE---GISDADIMDLEI 205 (227)
T ss_pred HHHHHHhhhhcCCCeEEEEeCH------------------HHHHHHHHHHh---CCCHHHHhcccC
Confidence 9988642 3799999999 99999999999 888777777766
No 11
>PRK01295 phosphoglyceromutase; Provisional
Probab=99.98 E-value=5.6e-32 Score=241.90 Aligned_cols=157 Identities=25% Similarity=0.314 Sum_probs=138.1
Q ss_pred CCcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------cc
Q psy2709 35 TPKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TS 94 (295)
Q Consensus 35 ~~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~ 94 (295)
|+++||||||||+++|..++++| |.|||+.|++||++++++|.+. +.||+|||++|+. ++
T Consensus 1 ~~~~i~LVRHGet~~n~~~~~~G~~d~~Lt~~G~~qA~~~~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~ 80 (206)
T PRK01295 1 MSRTLVLVRHGQSEWNLKNLFTGWRDPDLTEQGVAEAKAAGRKLKAAGLKFDIAFTSALSRAQHTCQLILEELGQPGLET 80 (206)
T ss_pred CCceEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEeCCcHHHHHHHHHHHHHcCCCCCCe
Confidence 57899999999999999999999 9999999999999999999852 9999999999965 46
Q ss_pred cccccccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHH-HHHH----cCCeEEEEecCC
Q psy2709 95 EAIPALNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVL-LELE----REDNLLVEMLQF 169 (295)
Q Consensus 95 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l-~~l~----~~~~vLvVsHg~ 169 (295)
.+++.|+|+++|.|+|++++|+.+.+|+.+..++.+...+++|+|||+.|+.+|+..++ +.+. .+++|||||||
T Consensus 81 ~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg- 159 (206)
T PRK01295 81 IRDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDVPPPGGESLKDTGARVLPYYLQEILPRVLRGERVLVAAHG- 159 (206)
T ss_pred EECCcccccccccccCCcHHHHHHHchHHHHHHhhcccCCCCcCCCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEcCh-
Confidence 78899999999999999999999999986544444556788999999999999999974 4552 23799999999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 170 NKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++|++++++++ +.+.+.++.+.+
T Consensus 160 -----------------~~ir~l~~~~l---~~~~~~~~~~~~ 182 (206)
T PRK01295 160 -----------------NSLRALVMVLD---GLTPEQILKLEL 182 (206)
T ss_pred -----------------HHHHHHHHHHh---CCCHHHHhhcCC
Confidence 99999999999 888888877766
No 12
>PRK03482 phosphoglycerate mutase; Provisional
Probab=99.97 E-value=3.8e-31 Score=236.31 Aligned_cols=168 Identities=21% Similarity=0.212 Sum_probs=138.8
Q ss_pred CcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHhh----cccccccc
Q psy2709 36 PKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA---------ARRTKQTVAGIHA----TSEAIPAL 100 (295)
Q Consensus 36 ~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~---------l~Ra~qTA~~i~~----~~~~~~~L 100 (295)
|++||||||||+++|..++++| |.+||++|++||++++++|... +.||+|||++|+. ++.++++|
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~d~~Lt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L 80 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVAERAKELGITHIISSDLGRTRRTAEIIAQACGCDIIFDPRL 80 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCCCCCcCHHHHHHHHHHHHHHhcCCCCEEEECCcHHHHHHHHHHHHhcCCCeeEChhc
Confidence 4789999999999999988888 9999999999999999999864 9999999999976 67889999
Q ss_pred cccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHcC---CeEEEEecCCCccccCCc
Q psy2709 101 NELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELERE---DNLLVEMLQFNKDYKNMS 177 (295)
Q Consensus 101 ~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~~---~~vLvVsHg~~~~~~~~~ 177 (295)
+|+++|.|+|++++++...++.....+......+.+|+|||+.++..|+..++.++... ++|||||||
T Consensus 81 ~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg--------- 151 (215)
T PRK03482 81 RELNMGVLEKRHIDSLTEEEEGWRRQLVNGTVDGRIPEGESMQELSDRMHAALESCLELPQGSRPLLVSHG--------- 151 (215)
T ss_pred cccCCccccCCcHHHHHhhHHHHHHhhhcCCCccCCCCCccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCc---------
Confidence 99999999999999987654432222223445667899999999999999999998642 689999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCcccccccceEEEcCCCCCCCcccccceeEEEEEEe
Q psy2709 178 EEKALDDFQHKMEHFLEVYETINPKLEARYSYVKVYDGENTTSPLALSTYTYTIIKLTT 236 (295)
Q Consensus 178 ~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i~~~~~~~~P~sls~~~~~i~~l~~ 236 (295)
++|++++++++ +.+...+..+. +.||+.+++++..
T Consensus 152 ---------~~i~~l~~~l~---~~~~~~~~~~~------------~~n~sis~~~~~~ 186 (215)
T PRK03482 152 ---------IALGCLVSTIL---GLPAWAERRLR------------LRNCSISRVDYQE 186 (215)
T ss_pred ---------HHHHHHHHHHh---CCChhhhhccC------------CCCcEEEEEEEeC
Confidence 99999999999 77776655443 4455556665543
No 13
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=5.5e-31 Score=242.53 Aligned_cols=158 Identities=21% Similarity=0.232 Sum_probs=136.1
Q ss_pred CCCcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------c
Q psy2709 34 PTPKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------T 93 (295)
Q Consensus 34 ~~~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~ 93 (295)
+||++|||||||||.+|..++++| |.|||++|++||+++++.|... +.||+|||+.|+. +
T Consensus 2 ~~m~~i~LVRHGqt~~n~~~~~~G~~D~pLTe~G~~QA~~~a~~l~~~~~~~~~IysSpl~Ra~qTA~~i~~~~~~~~~~ 81 (249)
T PRK14120 2 MMTYTLVLLRHGESEWNAKNLFTGWVDVDLTEKGEAEAKRGGELLAEAGVLPDVVYTSLLRRAIRTANLALDAADRLWIP 81 (249)
T ss_pred CCCcEEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEecChHHHHHHHHHHHHhcccCCCC
Confidence 466899999999999999999999 9999999999999999999752 9999999999853 5
Q ss_pred ccccccccccCCCccCCCCHHHHHhhChHH-HHhhhhCcccC----------------------CCCCCCCHHHHHHHHH
Q psy2709 94 SEAIPALNELDAGVCEGYSYEEMQDKFPQE-FAWRDQDKLRY----------------------RYPWGESYVDIMQRIR 150 (295)
Q Consensus 94 ~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~d~~~~----------------------~~p~gES~~d~~~Ri~ 150 (295)
+..+++|+|+++|.|+|++.+|+.+++|+. +..|..+.... .+|+|||+.++.+|+.
T Consensus 82 i~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p~GES~~~~~~Rv~ 161 (249)
T PRK14120 82 VRRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVGPRTECLKDVVARFL 161 (249)
T ss_pred eEECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCCCCCCCCHHHHHHHHH
Confidence 678899999999999999999999999974 55444332111 2489999999999999
Q ss_pred HHHHHH--H---cCCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 151 PVLLEL--E---REDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 151 ~~l~~l--~---~~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
.+++++ . ..++||||||| ++|++++++++ +.+.+.++.+.+
T Consensus 162 ~~l~~~~~~~~~~~~~iliVsHg------------------gvir~l~~~~~---~~~~~~~~~~~i 207 (249)
T PRK14120 162 PYWEDDIVPDLKAGKTVLIAAHG------------------NSLRALVKHLD---GISDEDIAGLNI 207 (249)
T ss_pred HHHHHHHHHHhhCCCEEEEEeCH------------------HHHHHHHHHHh---CCCHHHhheecc
Confidence 999874 2 23789999999 99999999999 888888888877
No 14
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=99.97 E-value=5.6e-31 Score=233.46 Aligned_cols=152 Identities=23% Similarity=0.268 Sum_probs=134.1
Q ss_pred EEEEEcCCcCccccCCccCC---CCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHhh----ccccccccc
Q psy2709 38 TFYFSRHGESEFNVLGRIGG---DADLSPRGRLYAAALARHFNEA---------ARRTKQTVAGIHA----TSEAIPALN 101 (295)
Q Consensus 38 ~iylvRHGes~~n~~~~~~g---D~~Lt~~G~~qA~~la~~l~~~---------l~Ra~qTA~~i~~----~~~~~~~L~ 101 (295)
+||||||||+.+|..++++| |.|||+.|++||++++++|... +.||+|||++|+. ++.++++|+
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~ 80 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRTPGVDLDERGREQAAALAERLADLPIAAIVSSPLERCRETAEPIAEARGLPPRVDERLG 80 (204)
T ss_pred CEEEEeCCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHhcCCCCEEEeCcHHHHHHHHHHHHHhcCCCceECcccc
Confidence 58999999999999999988 4899999999999999999854 9999999999976 788999999
Q ss_pred ccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHc--------CCeEEEEecCCCccc
Q psy2709 102 ELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELER--------EDNLLVEMLQFNKDY 173 (295)
Q Consensus 102 E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~--------~~~vLvVsHg~~~~~ 173 (295)
|+++|.|+|++++++.+. ..+..|..++..+.+|+|||+.++.+|+.++++++.. +++|||||||
T Consensus 81 E~~~G~~eG~~~~e~~~~--~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg----- 153 (204)
T TIGR03848 81 ECDYGDWTGRELKELAKE--PLWPVVQAHPSAAVFPGGESLAQVQARAVAAVREHDARLAAEHGPDAVWVACSHG----- 153 (204)
T ss_pred cCCCCeeCCcCHHHHhCc--HHHHHHhcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCEEEEEeCC-----
Confidence 999999999999999764 3455566677777899999999999999999988742 2689999999
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 174 KNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 174 ~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++|++++++++ +.+...++.+.+
T Consensus 154 -------------~~ir~ll~~~l---g~~~~~~~~~~~ 176 (204)
T TIGR03848 154 -------------DVIKSVLADAL---GMHLDLFQRIVV 176 (204)
T ss_pred -------------hHHHHHHHHHh---CCCHHHhheeee
Confidence 99999999999 888877777766
No 15
>PRK13462 acid phosphatase; Provisional
Probab=99.97 E-value=7e-31 Score=234.49 Aligned_cols=151 Identities=23% Similarity=0.279 Sum_probs=131.9
Q ss_pred CCcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhhcc-cccccc
Q psy2709 35 TPKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHATS-EAIPAL 100 (295)
Q Consensus 35 ~~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~~~-~~~~~L 100 (295)
.+++||||||||+++|..++++| |.|||++|++||+++++.|... +.||+|||+.+..++ ..+++|
T Consensus 4 ~~~~i~LvRHG~t~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~L 83 (203)
T PRK13462 4 RNHRLLLLRHGETEWSKSGRHTGRTELELTETGRTQAELAGQALGELELDDPLVISSPRRRALDTAKLAGLTVDEVSGLL 83 (203)
T ss_pred cccEEEEEeCCCCCcccCCCccCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCEEEECchHHHHHHHHHhcCcccccCccc
Confidence 35689999999999999999988 9999999999999999998753 999999999985544 689999
Q ss_pred cccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHcC---CeEEEEecCCCccccCCc
Q psy2709 101 NELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELERE---DNLLVEMLQFNKDYKNMS 177 (295)
Q Consensus 101 ~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~~---~~vLvVsHg~~~~~~~~~ 177 (295)
+|+++|.|+|++++|+.+.+|+...| ...+|+|||+.++.+|+..+++++... ++|||||||
T Consensus 84 rE~~~G~~eG~~~~ei~~~~~~~~~~------~~~~p~gES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg--------- 148 (203)
T PRK13462 84 AEWDYGSYEGLTTPQIRESEPDWLVW------THGCPGGESVAQVNERADRAVALALEHMESRDVVFVSHG--------- 148 (203)
T ss_pred cccCCccccCCcHHHHHHhCchHHhh------cCCCCCCccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCC---------
Confidence 99999999999999999999974332 234589999999999999999998643 789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 178 EEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 178 ~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++|++++++++ +.+...++.+.+
T Consensus 149 ---------~vir~ll~~~l---~~~~~~~~~~~~ 171 (203)
T PRK13462 149 ---------HFSRAVITRWV---ELPLAEGSRFAM 171 (203)
T ss_pred ---------HHHHHHHHHHh---CCCHHHhhhccc
Confidence 99999999999 777766666555
No 16
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=99.97 E-value=2.3e-31 Score=229.35 Aligned_cols=151 Identities=28% Similarity=0.379 Sum_probs=136.5
Q ss_pred EEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHhh----ccccccccccc
Q psy2709 39 FYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA---------ARRTKQTVAGIHA----TSEAIPALNEL 103 (295)
Q Consensus 39 iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~---------l~Ra~qTA~~i~~----~~~~~~~L~E~ 103 (295)
||||||||+.+|..+++ | |.+||+.|++||+.+|+.|... +.||+|||+.++. ++.+++.|+|+
T Consensus 1 i~lvRHg~t~~n~~~~~-g~~d~~Lt~~G~~qa~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~E~ 79 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQTDVPLAEKGAEQAAALREKLADVPFDAVYSSPLSRCRELAEILAERRGLPIIKDPRLREM 79 (177)
T ss_pred CEEEeCCCCccCCCcee-CCCCCCcChhHHHHHHHHHHHhcCCCCCEEEECchHHHHHHHHHHHhhcCCCceECCccccc
Confidence 69999999999999888 6 9999999999999999999644 9999999999976 67889999999
Q ss_pred CCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHcC---CeEEEEecCCCccccCCcHHH
Q psy2709 104 DAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELERE---DNLLVEMLQFNKDYKNMSEEK 180 (295)
Q Consensus 104 ~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~~---~~vLvVsHg~~~~~~~~~~~~ 180 (295)
++|.|+|++.+++.+++| .+..|..++..+.+|+|||+.++.+|+..++.++.+. ++|||||||
T Consensus 80 ~~G~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg------------ 146 (177)
T TIGR03162 80 DFGDWEGRSWDEIPEAYP-ELDAWAADWQHARPPGGESFADFYQRVSEFLEELLKAHEGDNVLIVTHG------------ 146 (177)
T ss_pred cCCccCCCCHHHHHHhCH-HHHHHHhCcccCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEECH------------
Confidence 999999999999999998 5666666777788999999999999999999998753 789999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 181 ALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 181 ~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++|++++++++ +.+.+.++.+.+
T Consensus 147 ------~~i~~l~~~~~---~~~~~~~~~~~~ 169 (177)
T TIGR03162 147 ------GVIRALLAHLL---GLPLEQWWSFDV 169 (177)
T ss_pred ------HHHHHHHHHHh---CCCHHHHhcccc
Confidence 99999999999 888877777655
No 17
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=99.97 E-value=1.9e-30 Score=238.22 Aligned_cols=155 Identities=23% Similarity=0.280 Sum_probs=133.2
Q ss_pred cEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------cccc
Q psy2709 37 KTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TSEA 96 (295)
Q Consensus 37 ~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~~~ 96 (295)
|+|||||||||.+|..++++| |.+||+.|++||+.+|++|... ++||+|||++|+. ++..
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~D~~Lt~~G~~QA~~la~~L~~~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~~~~i~~ 80 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWVDVKLSEKGQQEAKRAGELLKEEGYEFDVAYTSLLKRAIHTLNIALDELDQLWIPVKK 80 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcChHHHHHHHHHHHHhcCCCCCCeee
Confidence 579999999999999999999 9999999999999999999752 9999999999975 4567
Q ss_pred cccccccCCCccCCCCHHHHHhhChHH-HHhhhhCcc------------------cC------CCCCCCCHHHHHHHHHH
Q psy2709 97 IPALNELDAGVCEGYSYEEMQDKFPQE-FAWRDQDKL------------------RY------RYPWGESYVDIMQRIRP 151 (295)
Q Consensus 97 ~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~d~~------------------~~------~~p~gES~~d~~~Ri~~ 151 (295)
++.|+|+++|.|+|++++++.+++|+. +..|..+.. .| .+|+|||+.++.+|+..
T Consensus 81 ~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~~p~GES~~~~~~Rv~~ 160 (245)
T TIGR01258 81 SWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKVLPLTESLKDTIARVLP 160 (245)
T ss_pred CcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCcccCCCCCCHHHHHHHHHH
Confidence 899999999999999999999999986 444433211 11 37899999999999999
Q ss_pred HHHHHHc-----CCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 152 VLLELER-----EDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 152 ~l~~l~~-----~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
+|+++.. +++||||||| ++|++++++++ +.+...++.+.+
T Consensus 161 ~l~~l~~~~~~~~~~vlvVsHg------------------~vir~l~~~l~---~l~~~~~~~~~~ 205 (245)
T TIGR01258 161 YWNDEIAPDLLSGKRVLIVAHG------------------NSLRALVKHLE---GISDEEILELNI 205 (245)
T ss_pred HHHHHHhhhhcCCCEEEEEcCh------------------HHHHHHHHHHH---CcCHHHHhheec
Confidence 9988642 3789999999 99999999999 888777776666
No 18
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=3.5e-30 Score=236.77 Aligned_cols=155 Identities=23% Similarity=0.278 Sum_probs=133.1
Q ss_pred cEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------cccc
Q psy2709 37 KTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TSEA 96 (295)
Q Consensus 37 ~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~~~ 96 (295)
|+||||||||+.+|..++++| |.|||+.|++||+++|++|... ++||+|||++|.. ++..
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~D~pLte~G~~QA~~la~~L~~~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~~~~~~~ 80 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWTDVDLSEKGVSEAKAAGKLLKEEGYTFDVAYTSVLKRAIRTLWIVLDELDQMWLPVEK 80 (247)
T ss_pred CEEEEEECCCcccccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcCCHHHHHHHHHHHHHcCCCCCCceE
Confidence 579999999999999999998 9999999999999999999753 9999999999965 4567
Q ss_pred cccccccCCCccCCCCHHHHHhhChHH-HHhhhhCcc------------------------cCCCCCCCCHHHHHHHHHH
Q psy2709 97 IPALNELDAGVCEGYSYEEMQDKFPQE-FAWRDQDKL------------------------RYRYPWGESYVDIMQRIRP 151 (295)
Q Consensus 97 ~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~d~~------------------------~~~~p~gES~~d~~~Ri~~ 151 (295)
+++|+|+++|.|+|++++|+.+++|+. +..|..+.. ...+|+|||+.++..|+..
T Consensus 81 ~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~ 160 (247)
T PRK14115 81 SWRLNERHYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEELPLTESLKDTIARVLP 160 (247)
T ss_pred CccccccccccccCCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCCCCCCCcHHHHHHHHHH
Confidence 899999999999999999999999986 433332100 2347999999999999999
Q ss_pred HHHHHHc-----CCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 152 VLLELER-----EDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 152 ~l~~l~~-----~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
+|+++.. .++||||||| ++|++++++++ +.+...++.+.+
T Consensus 161 ~l~~~i~~~~~~~~~vlvVtHg------------------gvir~l~~~ll---~~~~~~~~~~~~ 205 (247)
T PRK14115 161 YWNETIAPQLKSGKRVLIAAHG------------------NSLRALVKYLD---NISDEEILELNI 205 (247)
T ss_pred HHHHHHHHHhcCCCeEEEEeCh------------------HHHHHHHHHHh---CCCHHHhheeec
Confidence 9988532 3789999999 99999999999 887777777766
No 19
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.96 E-value=5.2e-29 Score=240.06 Aligned_cols=158 Identities=26% Similarity=0.318 Sum_probs=141.8
Q ss_pred CCCCcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHhh----cccc
Q psy2709 33 RPTPKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA----------ARRTKQTVAGIHA----TSEA 96 (295)
Q Consensus 33 ~~~~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~----------l~Ra~qTA~~i~~----~~~~ 96 (295)
+.++++||||||||+.+|..++++| |.+||+.|++||+.+++.|... +.||+|||+.|.. ++.+
T Consensus 168 ~~~~~~i~LvRHGet~~n~~~~~~g~~D~~Lt~~G~~QA~~l~~~l~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~ 247 (372)
T PRK07238 168 RGTPTRLLLLRHGQTELSVQRRYSGRGNPELTEVGRRQAAAAARYLAARGGIDAVVSSPLQRARDTAAAAAKALGLDVTV 247 (372)
T ss_pred CCCceEEEEEeCCCCCcccCCeeeCCCCCCcCHHHHHHHHHHHHHHhccCCCCEEEECChHHHHHHHHHHHHhcCCCcEE
Confidence 4577899999999999999999887 9999999999999999999752 9999999999976 6788
Q ss_pred cccccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHcC---CeEEEEecCCCccc
Q psy2709 97 IPALNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELERE---DNLLVEMLQFNKDY 173 (295)
Q Consensus 97 ~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~~---~~vLvVsHg~~~~~ 173 (295)
++.|+|+++|.|+|++++|+.+.+|+.+..|..++ .+.+|+|||+.++.+|+..++.+|... ++|||||||
T Consensus 248 ~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~~~~-~~~~p~gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg----- 321 (372)
T PRK07238 248 DDDLIETDFGAWEGLTFAEAAERDPELHRAWLADT-SVAPPGGESFDAVARRVRRARDRLIAEYPGATVLVVSHV----- 321 (372)
T ss_pred CccceeCCCCccCCCCHHHHHHHCHHHHHHHHhCC-CCCCcCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEECh-----
Confidence 99999999999999999999999999987776665 567899999999999999999998653 789999999
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 174 KNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 174 ~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++|++++++++ +.+...+..+.+
T Consensus 322 -------------~~ir~ll~~~l---~~~~~~~~~~~~ 344 (372)
T PRK07238 322 -------------TPIKTLLRLAL---DAGPGVLYRLHL 344 (372)
T ss_pred -------------HHHHHHHHHHh---CCCHHHhhhccc
Confidence 99999999999 877777666555
No 20
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.95 E-value=9.4e-28 Score=200.06 Aligned_cols=131 Identities=40% Similarity=0.567 Sum_probs=118.2
Q ss_pred EEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh----cccccccc
Q psy2709 38 TFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA----TSEAIPAL 100 (295)
Q Consensus 38 ~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~----~~~~~~~L 100 (295)
+|||||||++.+|..++.+| |.+||+.|+.||+.+++.|.+. +.||+|||+.+.. ++.+++.|
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~d~~Lt~~G~~qA~~~~~~l~~~~~~~~~i~~Sp~~R~~qTA~~~~~~~~~~~~~~~~l 80 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDSDPPLTERGREQARQLGEYLAERDIQIDVIYSSPLRRCIQTAEIIAEGLGIEIIVDPRL 80 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTSSTGBEHHHHHHHHHHHHHHHHTTSSCSEEEEESSHHHHHHHHHHHHHHTSEEEEEGGG
T ss_pred CEEEEECCccccccCCCcCCCCCccccHHHHHHHHhhcccccccccCceEEecCCcchhhhhhchhhccccccccccccc
Confidence 69999999999999888888 6679999999999999999844 9999999999987 78899999
Q ss_pred cccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHc----CCeEEEEecC
Q psy2709 101 NELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELER----EDNLLVEMLQ 168 (295)
Q Consensus 101 ~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~----~~~vLvVsHg 168 (295)
+|+++|.|+|.+..++.+.+|..+..|..+...+.+|+|||+.++.+|+..+++++.. .++|||||||
T Consensus 81 ~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~~~vliVsHg 152 (158)
T PF00300_consen 81 REIDFGDWEGRPFDEIEEKFPDEFEAWWSDPYFYRPPGGESWEDFQQRVKQFLDELIAYKRPGENVLIVSHG 152 (158)
T ss_dssp SCCGCGGGTTSBHHHHHHHHHHHHHHHHHHTSSCGSTTSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE-H
T ss_pred ccccchhhcccchhhHHhhhhcccchhhccccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEEecH
Confidence 9999999999999999999998887777788889999999999999999999999984 3999999999
No 21
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.94 E-value=8.8e-27 Score=197.09 Aligned_cols=127 Identities=35% Similarity=0.429 Sum_probs=111.4
Q ss_pred EEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHH----H--------HHHHHHHHHHHhhc---ccccccc
Q psy2709 38 TFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNE----A--------ARRTKQTVAGIHAT---SEAIPAL 100 (295)
Q Consensus 38 ~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~----~--------l~Ra~qTA~~i~~~---~~~~~~L 100 (295)
+|||||||+|.+|..+.+.| |.|||+.|+.||+++|++|.. . +.||+|||+.+... ...++.|
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~~d~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~L 80 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGWTDSPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALGLGEVDPRL 80 (155)
T ss_pred CEEEEeCCCCcccccCeEcCCCCCCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcCCCCCChhh
Confidence 48999999999998877775 999999999999999999975 1 99999999999762 2478999
Q ss_pred cccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHc-----CCeEEEEecC
Q psy2709 101 NELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELER-----EDNLLVEMLQ 168 (295)
Q Consensus 101 ~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~-----~~~vLvVsHg 168 (295)
+|+++|.|+|++++++.+++|+.+. ++..+.+|+|||+.++..|+..++.++.+ .++|||||||
T Consensus 81 ~E~~~G~~~g~~~~~~~~~~~~~~~----~~~~~~~~~gEs~~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg 149 (155)
T smart00855 81 RERDYGAWEGLTKEEERAKAWTRPA----DWLGAAPPGGESLADVVERLVRALEELIATHDKSGQNVLIVSHG 149 (155)
T ss_pred hhcccceecCCcHHHHHHHHHHHHh----ccCCCCCcCCCCHHHHHHHHHHHHHHHHHhcccCCCeEEEEECC
Confidence 9999999999999999888877553 33567889999999999999999999864 3789999999
No 22
>KOG0235|consensus
Probab=99.93 E-value=1.6e-25 Score=201.86 Aligned_cols=157 Identities=25% Similarity=0.285 Sum_probs=138.9
Q ss_pred CCcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------cc
Q psy2709 35 TPKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TS 94 (295)
Q Consensus 35 ~~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~ 94 (295)
...++++||||||+||..++++| |.+||+.|.+||+++++.+... ++||+|||+.|.+ |+
T Consensus 4 ~~~~lvlvRHGes~wN~e~~~~G~~D~~Lte~G~~qA~~~~~~l~~~~~~~~~~~tS~l~RakqT~~~il~~~~~~~~pv 83 (214)
T KOG0235|consen 4 NTFRLVLVRHGESEWNKENIFQGWIDAPLTEKGEEQAKAAAQRLKDLNIEFDVCYTSDLKRAKQTAELILEELKQKKVPV 83 (214)
T ss_pred cceEEEEEecCchhhhhhCcccccccCccChhhHHHHHHHHHHHHhcCCcccEEecCHHHHHHHHHHHHHHhhccCCcce
Confidence 45789999999999999999999 9999999999999999999877 9999999999987 67
Q ss_pred cccccccccCCCccCCCCHHHHHhhChHH--H-HhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHc-----CCeEEEEe
Q psy2709 95 EAIPALNELDAGVCEGYSYEEMQDKFPQE--F-AWRDQDKLRYRYPWGESYVDIMQRIRPVLLELER-----EDNLLVEM 166 (295)
Q Consensus 95 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~--~-~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~-----~~~vLvVs 166 (295)
..+..|+|+++|.++|+...|+.++++++ + .++..+.....+|.|||+.++..|+.+++.+... ..+|||++
T Consensus 84 ~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~i~~~~~~gk~Vli~a 163 (214)
T KOG0235|consen 84 LYTWRLNERHYGDLQGLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEEIAKESKEGKNVLIVA 163 (214)
T ss_pred EechhhchhhhccccCccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHHHhhhhhhcCCcEEEEEc
Confidence 78899999999999999999999999987 2 3444443445678999999999999999997543 28999999
Q ss_pred cCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 167 LQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 167 Hg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
|| ..+|.++.++. +...+....+.+
T Consensus 164 HG------------------nsLR~i~~~l~---g~s~~~i~~~~~ 188 (214)
T KOG0235|consen 164 HG------------------NSLRAIVKHLE---GISDEAIKELNL 188 (214)
T ss_pred Cc------------------HHHHHHHHHHh---cCCHhhhhheec
Confidence 99 99999999999 888888777777
No 23
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.93 E-value=7.6e-26 Score=206.33 Aligned_cols=172 Identities=19% Similarity=0.185 Sum_probs=137.6
Q ss_pred cccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------cccccccccccCCCcc
Q psy2709 49 FNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TSEAIPALNELDAGVC 108 (295)
Q Consensus 49 ~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~~~~~~L~E~~~G~~ 108 (295)
+|..++++| |.|||+.|++||+++++.|... ++||+|||++|.+ ++..+++|+|+++|.|
T Consensus 1 ~N~~~~~qG~~D~pLTe~G~~QA~~l~~~L~~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~~ 80 (236)
T PTZ00123 1 WNKENRFTGWTDVPLSEKGVQEAREAGKLLKEKGFRFDVVYTSVLKRAIKTAWIVLEELGQLHVPVIKSWRLNERHYGAL 80 (236)
T ss_pred CcccCceeCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCceeCchhhhcccccc
Confidence 578889999 9999999999999999999752 9999999999975 4567899999999999
Q ss_pred CCCCHHHHHhhChHHH-HhhhhCcc------------------------cCCCCCCCCHHHHHHHHHHHHHHHH-c----
Q psy2709 109 EGYSYEEMQDKFPQEF-AWRDQDKL------------------------RYRYPWGESYVDIMQRIRPVLLELE-R---- 158 (295)
Q Consensus 109 eg~~~~ei~~~~p~~~-~~~~~d~~------------------------~~~~p~gES~~d~~~Ri~~~l~~l~-~---- 158 (295)
+|++++++.+.+|+.+ .+|..+.. .+.+|+|||+.++.+|+.++++++. .
T Consensus 81 EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~li~~~~~~ 160 (236)
T PTZ00123 81 QGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTVERVLPYWEDHIAPDILA 160 (236)
T ss_pred cCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999873 33332210 1345899999999999999998853 1
Q ss_pred CCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEEEcCCCCCCCcccccceeEEEEEE---
Q psy2709 159 EDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKVYDGENTTSPLALSTYTYTIIKLT--- 235 (295)
Q Consensus 159 ~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i~~~~~~~~P~sls~~~~~i~~l~--- 235 (295)
.++||||||| ++|++++++++ +.+...+..+.+ .++..+++++.
T Consensus 161 ~~~vliVsHG------------------~vir~ll~~l~---~~~~~~~~~~~~------------~n~~~~~~~~~~~~ 207 (236)
T PTZ00123 161 GKKVLVAAHG------------------NSLRALVKYLD---KMSEEDILELNI------------PTGVPLVYELDENL 207 (236)
T ss_pred CCeEEEEeCH------------------HHHHHHHHHHh---CCCHHHHhhccC------------CCCceEEEEECCCC
Confidence 3789999999 99999999999 878777766655 33445556554
Q ss_pred ---eccCCceEEEEecccccc
Q psy2709 236 ---TSGYKTHMEIIKLNIACV 253 (295)
Q Consensus 236 ---~~~~~~~~~~~~l~~~~v 253 (295)
..-|+|..|.+++++++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~ 228 (236)
T PTZ00123 208 KPIKKYYLLDEEELKAKMEAV 228 (236)
T ss_pred CEeeeeecCCHHHHHHHHHHH
Confidence 455777777777776665
No 24
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.2e-24 Score=194.93 Aligned_cols=162 Identities=22% Similarity=0.257 Sum_probs=141.7
Q ss_pred CcEEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-------ccc
Q psy2709 36 PKTFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-------TSE 95 (295)
Q Consensus 36 ~~~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-------~~~ 95 (295)
|++++|+|||||+||..+++.| |.+||+.|..||...|+.|++. ++||++|..++.. ++.
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~Dv~LtekG~~EA~~ag~llk~~~~~~dia~TS~L~RAi~T~~i~L~e~d~~~ipv~ 80 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWVDVDLTEKGISEAKAAGKLLKEEGLEFDIAYTSVLKRAIKTLNIVLEESDQLWIPVI 80 (230)
T ss_pred CceEEEEecCchhhhhcCceeeeeecCcchhhHHHHHHHHHHHHHcCCCcceeehHHHHHHHHHHHHHhhhhcccCcchh
Confidence 4689999999999999999999 9999999999999999999985 9999999999987 566
Q ss_pred ccccccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCC-------------------------CCCCHHHHHHHHH
Q psy2709 96 AIPALNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYP-------------------------WGESYVDIMQRIR 150 (295)
Q Consensus 96 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p-------------------------~gES~~d~~~Ri~ 150 (295)
...+|+|+++|.+.|+...+..++|.++.-..+...+...+| .+||..+...|+.
T Consensus 81 kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~~d~ry~~~~~~~~p~~EsLkdt~~Rv~ 160 (230)
T COG0588 81 KSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPHRDRRYAHLDIGGLPLTESLKDTVERVL 160 (230)
T ss_pred hHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccccccccccccccccCCCccchHHHHHHHhh
Confidence 778999999999999999999999999865444444555555 3499999999999
Q ss_pred HHHHHH-----HcCCeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEEEcCCCCCCCc
Q psy2709 151 PVLLEL-----EREDNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKVYDGENTTSPL 222 (295)
Q Consensus 151 ~~l~~l-----~~~~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i~~~~~~~~P~ 222 (295)
+++... ..+++|||++|| ..+|+|+.++. +.+.+++..+.| +|+.|+
T Consensus 161 Pyw~~~I~p~l~~Gk~VlI~AHG------------------NSlRaLiK~L~---~iSd~dI~~l~I----Ptg~Pl 212 (230)
T COG0588 161 PYWEDDIAPNLKSGKNVLIVAHG------------------NSLRALIKYLE---GISDEDILDLNI----PTGIPL 212 (230)
T ss_pred HHHHHHhhHHHhCCCeEEEEecc------------------hhHHHHHHHHh---CCCHHHhhhccc----CCCCcE
Confidence 998763 445999999999 99999999999 999999999999 444444
No 25
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.79 E-value=1e-18 Score=165.12 Aligned_cols=131 Identities=16% Similarity=0.165 Sum_probs=98.5
Q ss_pred cEEEEEcCCcCccccCCccCCCC---CCCHHHHHHHHHHHHHHHH---------H--------HHHHHHHHHHHhh----
Q psy2709 37 KTFYFSRHGESEFNVLGRIGGDA---DLSPRGRLYAAALARHFNE---------A--------ARRTKQTVAGIHA---- 92 (295)
Q Consensus 37 ~~iylvRHGes~~n~~~~~~gD~---~Lt~~G~~qA~~la~~l~~---------~--------l~Ra~qTA~~i~~---- 92 (295)
++||||||||+.++ + ..|. +||+.|++||+++|+.|.+ . |.||+|||++|++
T Consensus 103 ~~L~LVRHGq~~~~--~--~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~~~~ 178 (299)
T PTZ00122 103 RQIILVRHGQYINE--S--SNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEAFPG 178 (299)
T ss_pred eEEEEEECCCCCCC--C--CCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHhCCC
Confidence 89999999997654 2 2344 4999999999999999986 3 9999999999975
Q ss_pred -cccccccccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHcC------CeEEEE
Q psy2709 93 -TSEAIPALNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELERE------DNLLVE 165 (295)
Q Consensus 93 -~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~~------~~vLvV 165 (295)
++..+++|+| |.+..+. | ....+.++++|+ .++.+|+..+++++... +++|||
T Consensus 179 ~~v~~d~~LrE-------G~~~~~~----~--------~~~~~~~~gee~-~~~~~Rv~~al~~i~~r~~~~~~~~vLVV 238 (299)
T PTZ00122 179 VRLIEDPNLAE-------GVPCAPD----P--------PSRGFKPTIEEI-LEDMKRIEAAFEKYFHRPVEDEDSVEIIV 238 (299)
T ss_pred CCceeCccccc-------CCccccC----c--------cccccCCCcchH-HHHHHHHHHHHHHHHHhcccCCCCeEEEE
Confidence 5677888988 3332211 1 011234455555 66799999999988531 468999
Q ss_pred ecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 166 MLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 166 sHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
||| ++|+++++.++ +.+...+..+.+
T Consensus 239 sHG------------------gvIR~ll~~lL---glp~~~~~~~~~ 264 (299)
T PTZ00122 239 CHG------------------NVIRYLVCRAL---QLPPEAWLRLSL 264 (299)
T ss_pred eCC------------------hHHHHHHHHHh---CcCHHHHhhccC
Confidence 999 99999999999 877776655544
No 26
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.78 E-value=2.2e-18 Score=144.58 Aligned_cols=110 Identities=32% Similarity=0.425 Sum_probs=91.4
Q ss_pred EEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh-----ccccccc
Q psy2709 38 TFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA-----TSEAIPA 99 (295)
Q Consensus 38 ~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~-----~~~~~~~ 99 (295)
+|||+|||++.+|..+...+ |.+||++|++||++++++|... +.||+|||+.+.. ++..++.
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~~Sp~~Ra~qTa~~l~~~~~~~~~~~~~~ 80 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQGWTDVPLTEKGREQARALGKRLKELGIKFDRIYSSPLKRAIQTAEIILEELPGLPVEVDPR 80 (153)
T ss_pred CEEEEECCCCcccccCcccCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECcHHHHHHHHHHHHHhcCCCCceeCcc
Confidence 58999999999998765554 9999999999999999999863 9999999999976 3445555
Q ss_pred ccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHc---CCeEEEEecCCCccccCC
Q psy2709 100 LNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELER---EDNLLVEMLQFNKDYKNM 176 (295)
Q Consensus 100 L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~---~~~vLvVsHg~~~~~~~~ 176 (295)
|+| .|+..++.++.+ .++|+||||+
T Consensus 81 L~e--------------------------------------------~R~~~~~~~l~~~~~~~~iliV~H~-------- 108 (153)
T cd07067 81 LRE--------------------------------------------ARVLPALEELIAPHDGKNVLIVSHG-------- 108 (153)
T ss_pred chH--------------------------------------------HHHHHHHHHHHHhCCCCeEEEEeCh--------
Confidence 555 788888888865 4899999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 177 SEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 177 ~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++|+.++++++ +.+...++.+.+
T Consensus 109 ----------~~i~~~~~~l~---~~~~~~~~~~~~ 131 (153)
T cd07067 109 ----------GVLRALLAYLL---GLSDEDILRLNL 131 (153)
T ss_pred ----------HHHHHHHHHHh---CCCHHHHHhcCC
Confidence 99999999999 776666555555
No 27
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.65 E-value=1.8e-15 Score=125.57 Aligned_cols=113 Identities=27% Similarity=0.318 Sum_probs=86.2
Q ss_pred EEEEEcCCcCccccCCccCC--CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhhcccccccccccC
Q psy2709 38 TFYFSRHGESEFNVLGRIGG--DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHATSEAIPALNELD 104 (295)
Q Consensus 38 ~iylvRHGes~~n~~~~~~g--D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~~~~~~~~L~E~~ 104 (295)
+|||+|||++.++..++..+ |.+||++|++||+.+|+.|... +.||+|||+.+.........+..
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~l~~~l~~~~~~~~~v~sSp~~R~~~Ta~~~~~~~~~~~~~~~-- 78 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTGWGDGPLTEKGRQQARELGKALRERYIKFDRIYSSPLKRAIQTAEIILEGLFEGLPVEV-- 78 (153)
T ss_pred CEEEEeCCCCccccCCCccCCCCCCcCHHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHHHHHHhcCCCCeEE--
Confidence 48999999999988776444 9999999999999999999874 99999999999763310000000
Q ss_pred CCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHc-----CCeEEEEecCCCccccCCcHH
Q psy2709 105 AGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELER-----EDNLLVEMLQFNKDYKNMSEE 179 (295)
Q Consensus 105 ~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~-----~~~vLvVsHg~~~~~~~~~~~ 179 (295)
.+. .|+.+++.++.. .+++++|||+
T Consensus 79 ---------------~~~------------------------~r~~~~~~~~~~~~~~~~~~iliv~H~----------- 108 (153)
T cd07040 79 ---------------DPR------------------------ARVLNALLELLARHLLDGKNVLIVSHG----------- 108 (153)
T ss_pred ---------------CHH------------------------HHHHHHHHHHHHhhCCCCCEEEEEeCC-----------
Confidence 000 778888877655 3899999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 180 KALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 180 ~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
++|+.++++++ +.+....+.+.+
T Consensus 109 -------~~i~~~~~~l~---~~~~~~~~~~~~ 131 (153)
T cd07040 109 -------GTIRALLAALL---GLSDEEILSLNL 131 (153)
T ss_pred -------HHHHHHHHHHh---CcCHHHhccccC
Confidence 99999999999 666555544444
No 28
>KOG4754|consensus
Probab=99.57 E-value=3.5e-14 Score=127.62 Aligned_cols=144 Identities=25% Similarity=0.334 Sum_probs=112.3
Q ss_pred CcEEEEEcCCcCccccCCccCC---------CCCCCHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhh-
Q psy2709 36 PKTFYFSRHGESEFNVLGRIGG---------DADLSPRGRLYAAALARHFNEA-------------ARRTKQTVAGIHA- 92 (295)
Q Consensus 36 ~~~iylvRHGes~~n~~~~~~g---------D~~Lt~~G~~qA~~la~~l~~~-------------l~Ra~qTA~~i~~- 92 (295)
-++||||||||..+|+.|.-.- |+-||+.|++|+.+|+.++... |+||.||+.+...
T Consensus 14 ~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f~~ 93 (248)
T KOG4754|consen 14 CKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAFGG 93 (248)
T ss_pred ceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHhcc
Confidence 5799999999999998864211 9999999999999999998766 9999999998754
Q ss_pred ----------cccccccc----cc-cCCCccC-CCCHHHHHhhChHH-HHhhhhC-cccCCCCCCCCHHHHHHHHHHHHH
Q psy2709 93 ----------TSEAIPAL----NE-LDAGVCE-GYSYEEMQDKFPQE-FAWRDQD-KLRYRYPWGESYVDIMQRIRPVLL 154 (295)
Q Consensus 93 ----------~~~~~~~L----~E-~~~G~~e-g~~~~ei~~~~p~~-~~~~~~d-~~~~~~p~gES~~d~~~Ri~~~l~ 154 (295)
++.+.|.+ +| +.--.|+ +.+..+.++.||.. |..-..+ .+.+.+.-.|++.+...|-+.++.
T Consensus 94 ~~~e~g~~~~p~~vsp~~i~~~rE~lG~hpCD~r~~v~~~~~lfp~~DFs~~~~dv~~~~~pdy~ed~e~~a~r~re~~~ 173 (248)
T KOG4754|consen 94 YLAEDGEDPAPVKVSPPFIAVCRETLGDHPCDRRSSVTDLMKLFPAYDFSLCETDVDPLKKPDYREDDEESAARSREFLE 173 (248)
T ss_pred eeccCCCcCCceeecchHHHHHHHHhCCCcccccchhHHHHhhcccccceeeccCcchhccCcchhhHHHHHHhHHHHHH
Confidence 55666777 77 5444454 56778888888875 3221111 112334456999999999999999
Q ss_pred HHHcC--CeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhh
Q psy2709 155 ELERE--DNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYE 197 (295)
Q Consensus 155 ~l~~~--~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~ 197 (295)
++... +.|.||+|+ +.|+.++..+.
T Consensus 174 ~l~~r~ek~iavvths------------------~fl~~llk~i~ 200 (248)
T KOG4754|consen 174 WLAKRPEKEIAVVTHS------------------GFLRSLLKKIQ 200 (248)
T ss_pred HHHhCccceEEEEEeh------------------HHHHHHHHHhc
Confidence 99764 889999999 99998888886
No 29
>PRK06193 hypothetical protein; Provisional
Probab=99.53 E-value=6.5e-14 Score=126.23 Aligned_cols=116 Identities=19% Similarity=0.145 Sum_probs=88.7
Q ss_pred CCcEEEEEcCCcCccccCCccCC-------CCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhhcccc
Q psy2709 35 TPKTFYFSRHGESEFNVLGRIGG-------DADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHATSEA 96 (295)
Q Consensus 35 ~~~~iylvRHGes~~n~~~~~~g-------D~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~~~~~ 96 (295)
....|||||||++++|..+...| |.+||++|++||+.++++|.+. +.||+|||+.+......
T Consensus 41 ~~~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~~~~d~V~sSpl~Ra~qTA~il~~~~~~ 120 (206)
T PRK06193 41 KGGYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALAIPVGKVISSPYCRAWETAQLAFGRHEK 120 (206)
T ss_pred cCCEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhccccc
Confidence 34689999999999887766555 3699999999999999999864 99999999998743221
Q ss_pred cccccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHcC-CeEEEEecCCCccccC
Q psy2709 97 IPALNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELERE-DNLLVEMLQFNKDYKN 175 (295)
Q Consensus 97 ~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~~-~~vLvVsHg~~~~~~~ 175 (295)
.+.+++. + ...+.+|++..+.+|+..+|+++... ++|+||+|+
T Consensus 121 ~~~l~~~-----------------~------------~~~~~~~~~~~y~~~l~~~I~~l~~~~~~vLlVgHn------- 164 (206)
T PRK06193 121 EIRLNFL-----------------N------------SEPVPAERNALLKAGLRPLLTTPPDPGTNTVLVGHD------- 164 (206)
T ss_pred Ccccccc-----------------c------------ccCCChhhHHHHHHHHHHHHhhCCCCCCeEEEEeCc-------
Confidence 1111100 0 01224588888889999999999765 899999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHhh
Q psy2709 176 MSEEKALDDFQHKMEHFLEVYE 197 (295)
Q Consensus 176 ~~~~~~~~~~~~vir~ll~~l~ 197 (295)
..|+.+..++.
T Consensus 165 -----------p~i~~l~g~~~ 175 (206)
T PRK06193 165 -----------DNLEAATGIYP 175 (206)
T ss_pred -----------hHHHHHhCCCC
Confidence 99988888766
No 30
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.52 E-value=4.3e-13 Score=114.85 Aligned_cols=107 Identities=16% Similarity=0.142 Sum_probs=76.3
Q ss_pred cEEEEEcCCcCccccCCccCCCCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhhcccccccccccCC
Q psy2709 37 KTFYFSRHGESEFNVLGRIGGDADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHATSEAIPALNELDA 105 (295)
Q Consensus 37 ~~iylvRHGes~~n~~~~~~gD~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~~~~~~~~L~E~~~ 105 (295)
|+|||+|||+++++.. -..|.+||++|++||+.++++|... +.||+|||+.+.+....... .
T Consensus 1 m~l~LvRHg~a~~~~~--~d~dr~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~-----~ 73 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA--SDSVRPLTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLNLPSS-----A 73 (152)
T ss_pred CEEEEEeCCCcccccC--CCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcCCCcc-----e
Confidence 5899999999998764 2238899999999999999999873 99999999999763321110 1
Q ss_pred CccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHc--CCeEEEEecCCCccccCCcHHHHHH
Q psy2709 106 GVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELER--EDNLLVEMLQFNKDYKNMSEEKALD 183 (295)
Q Consensus 106 G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~--~~~vLvVsHg~~~~~~~~~~~~~~~ 183 (295)
..++++ +|+ ++..++.. ++.++.. .++|+||+|+
T Consensus 74 ~~~~~l------------------------~p~-~~~~~~~~----~l~~~~~~~~~~vliVgH~--------------- 109 (152)
T TIGR00249 74 EVLEGL------------------------TPC-GDIGLVSD----YLEALTNEGVASVLLVSHL--------------- 109 (152)
T ss_pred EEccCc------------------------CCC-CCHHHHHH----HHHHHHhcCCCEEEEEeCC---------------
Confidence 111111 232 33444333 3444433 3799999999
Q ss_pred HHHHHHHHHHHHhh
Q psy2709 184 DFQHKMEHFLEVYE 197 (295)
Q Consensus 184 ~~~~vir~ll~~l~ 197 (295)
..+..++.+++
T Consensus 110 ---P~i~~l~~~l~ 120 (152)
T TIGR00249 110 ---PLVGYLVAELC 120 (152)
T ss_pred ---CCHHHHHHHHh
Confidence 99999999999
No 31
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.40 E-value=4.5e-12 Score=110.49 Aligned_cols=59 Identities=29% Similarity=0.354 Sum_probs=52.6
Q ss_pred CcEEEEEcCCcCccccCCccCCCCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhhcc
Q psy2709 36 PKTFYFSRHGESEFNVLGRIGGDADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHATS 94 (295)
Q Consensus 36 ~~~iylvRHGes~~n~~~~~~gD~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~~~ 94 (295)
||+|||+|||++++...+.-..|.+||++|+.+|..+|++|++. +.||+|||+++.+..
T Consensus 1 m~~L~LmRHgkA~~~~~~~~D~dR~Lt~~G~~ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~~~~ 70 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPGIADFDRPLTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVAEHL 70 (163)
T ss_pred CceEEEeecccccccCCCCCCccCcCCHHHHHHHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHHHhh
Confidence 57999999999999876644459999999999999999999988 999999999998733
No 32
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.39 E-value=1.4e-11 Score=106.48 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=46.4
Q ss_pred cEEEEEcCCcCccccCCccCCCCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhh
Q psy2709 37 KTFYFSRHGESEFNVLGRIGGDADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHA 92 (295)
Q Consensus 37 ~~iylvRHGes~~n~~~~~~gD~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~ 92 (295)
|+|||||||++.++.. ...|.|||++|++||+.++++|... +.||+|||++++.
T Consensus 1 m~l~lvRHg~a~~~~~--~d~~rpLt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~ 65 (159)
T PRK10848 1 MQVFIMRHGDAALDAA--SDSVRPLTTCGCDESRLMANWLKGQKVDIERVLVSPYLRAEQTLEVVGE 65 (159)
T ss_pred CEEEEEeCCCCCCCCC--CCcCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHH
Confidence 5799999999998742 1127799999999999999999863 9999999999976
No 33
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.37 E-value=3.2e-12 Score=114.87 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=54.4
Q ss_pred hhhHHHHHhcCCCCCcEEEEEcCCcCccccCCccCC-CCCCCHHHHHHHHHHHHHHHHH----------HHHHHHHHHHH
Q psy2709 22 QSEVLSYISNFRPTPKTFYFSRHGESEFNVLGRIGG-DADLSPRGRLYAAALARHFNEA----------ARRTKQTVAGI 90 (295)
Q Consensus 22 ~s~~~~~l~n~~~~~~~iylvRHGes~~n~~~~~~g-D~~Lt~~G~~qA~~la~~l~~~----------l~Ra~qTA~~i 90 (295)
..+.++-+.+ .-++|||+||||+.....+.... +.|||++|++||++++++|.+. +.||+|||+.+
T Consensus 43 ~~~~~~~~~~---~~~~L~LiRHGet~~~~~~~~~sD~RpLTerG~~qA~~lg~~L~~~~~~d~I~sSpa~Ra~qTAe~i 119 (201)
T PRK15416 43 DNKTLAELAK---QHPVVVLFRHAERCDRSDNQCLSDKTGITVKGTQDARELGKAFSADIPDYDLYSSNTVRTIQSATWF 119 (201)
T ss_pred cHHHHHHHhc---CCCEEEEEeCccccCccCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCCHHHHHHHHHH
Confidence 4455555544 33569999999983222121111 3689999999999999999753 99999999999
Q ss_pred hh--ccccccccccc
Q psy2709 91 HA--TSEAIPALNEL 103 (295)
Q Consensus 91 ~~--~~~~~~~L~E~ 103 (295)
+. ++..++.|.|+
T Consensus 120 a~~~~v~~~~~Lye~ 134 (201)
T PRK15416 120 SAGKKLTVDKRLSDC 134 (201)
T ss_pred hcCCCcEecHHHhhc
Confidence 75 34444444443
No 34
>KOG3734|consensus
Probab=99.32 E-value=1.2e-11 Score=115.41 Aligned_cols=146 Identities=24% Similarity=0.294 Sum_probs=106.8
Q ss_pred CCCCcEEEEEcCCcCccccCCc------------c------------------CC---CCCCCHHHHHHHHHHHHHHHHH
Q psy2709 33 RPTPKTFYFSRHGESEFNVLGR------------I------------------GG---DADLSPRGRLYAAALARHFNEA 79 (295)
Q Consensus 33 ~~~~~~iylvRHGes~~n~~~~------------~------------------~g---D~~Lt~~G~~qA~~la~~l~~~ 79 (295)
....+.|+++||||...+.-+. + .| |+|||..|..||+..|+.|.+.
T Consensus 9 ~~~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a 88 (272)
T KOG3734|consen 9 IDVPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNA 88 (272)
T ss_pred cCCCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhc
Confidence 4567899999999987742221 1 11 8999999999999999999877
Q ss_pred -----------HHHHHHHHHHHhh--------cccccccccccCCCccCC-----CCHHHHHhhChHHHHhhhhCcccCC
Q psy2709 80 -----------ARRTKQTVAGIHA--------TSEAIPALNELDAGVCEG-----YSYEEMQDKFPQEFAWRDQDKLRYR 135 (295)
Q Consensus 80 -----------l~Ra~qTA~~i~~--------~~~~~~~L~E~~~G~~eg-----~~~~ei~~~~p~~~~~~~~d~~~~~ 135 (295)
..||+|||..|.+ .+.++|.|-|+..-.-.| .+..|+....+..-.....- +...
T Consensus 89 ~~~i~~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~~~~~~~~~p~~is~~el~~~~~~VD~~y~P~-~~~~ 167 (272)
T KOG3734|consen 89 GIAIDVIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPEKWPKDGKFPFFISPDELKFPGFPVDLNYDPV-YKET 167 (272)
T ss_pred CCCcceeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchhhhcccCCCCCcCCHHHHhccCCCcccccchh-hhhc
Confidence 8999999999976 566788888875322222 34555544333221111100 0123
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcC---CeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhh
Q psy2709 136 YPWGESYVDIMQRIRPVLLELERE---DNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYE 197 (295)
Q Consensus 136 ~p~gES~~d~~~Ri~~~l~~l~~~---~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~ 197 (295)
+-++||++++.+|+..++.+|... ++||||+|| ..+....+.+.
T Consensus 168 ~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~------------------~sv~~~~~~l~ 214 (272)
T KOG3734|consen 168 PRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHG------------------SSVDTCSAQLQ 214 (272)
T ss_pred ccccccHHHHHHHHHHHHHHHHHhcCCCceEEEecc------------------chHHHHHHHhc
Confidence 558999999999999999999775 779999999 99999999998
No 35
>KOG4609|consensus
Probab=99.31 E-value=1.1e-11 Score=112.01 Aligned_cols=132 Identities=20% Similarity=0.250 Sum_probs=90.7
Q ss_pred CCcEEEEEcCCcCccccCCccCCCCCCCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhhcc------ccc
Q psy2709 35 TPKTFYFSRHGESEFNVLGRIGGDADLSPRGRLYAAALARHFNEA-----------ARRTKQTVAGIHATS------EAI 97 (295)
Q Consensus 35 ~~~~iylvRHGes~~n~~~~~~gD~~Lt~~G~~qA~~la~~l~~~-----------l~Ra~qTA~~i~~~~------~~~ 97 (295)
..+.|+||||||.... |. -..||++|++||+.++++|.+. |.||.+||.+|.+.+ ...
T Consensus 93 atRhI~LiRHgeY~~~--g~---~~hLTelGReQAE~tGkRL~elglk~d~vv~StM~RA~ETadIIlk~l~d~lk~~s~ 167 (284)
T KOG4609|consen 93 ATRHIFLIRHGEYHVD--GS---LEHLTELGREQAELTGKRLAELGLKFDKVVASTMVRATETADIILKHLPDDLKRVSC 167 (284)
T ss_pred hhceEEEEeccceecc--Cc---hhhcchhhHHHHHHHhHHHHHcCCchhhhhhhhhhhhHHHHHHHHHhCCCccceecc
Confidence 4578999999996432 11 2279999999999999999987 999999999998833 234
Q ss_pred ccccccCCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHHHHHHHHc--------CCeEEEEecCC
Q psy2709 98 PALNELDAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRPVLLELER--------EDNLLVEMLQF 169 (295)
Q Consensus 98 ~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~~l~~l~~--------~~~vLvVsHg~ 169 (295)
+.|+| |.++.- .|..-.|+-.+. -|..-..||+.++..+-. +.-.|||||+
T Consensus 168 ~ll~E-------GaP~pp----dPp~k~wrp~~~---------qy~rdgaRIEaafRryfhRA~p~QeedSy~liV~Ha- 226 (284)
T KOG4609|consen 168 PLLRE-------GAPYPP----DPPVKHWRPLDP---------QYYRDGARIEAAFRRYFHRASPSQEEDSYELIVCHA- 226 (284)
T ss_pred ccccc-------CCCCCC----CCCcccCCccCh---------HhhhcchHHHHHHHHHHhhcCcccccccEEEEEeec-
Confidence 44444 332210 011111111111 122334678887776521 2567999999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEE
Q psy2709 170 NKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKV 212 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i 212 (295)
.|||.+++..+ +.|++.|..+++
T Consensus 227 -----------------NVIRY~icRAL---q~PpegWlR~nl 249 (284)
T KOG4609|consen 227 -----------------NVIRYFICRAL---QFPPEGWLRMNL 249 (284)
T ss_pred -----------------chhhhhhhhhh---cCCcchhheecc
Confidence 99999999999 899988877766
No 36
>PF01591 6PF2K: 6-phosphofructo-2-kinase; InterPro: IPR013079 6-Phosphofructo-2-kinase (2.7.1.105 from EC, 3.1.3.46 from EC) is a bifunctional enzyme that catalyses both the synthesis and the degradation of fructose-2, 6-bisphosphate. The fructose-2,6-bisphosphatase reaction involves a phosphohistidine intermediate. The catalytic pathway is: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate D-fructose 2,6-bisphosphate + H2O = 6-fructose 6-phosphate + Pi The enzyme is important in the regulation of hepatic carbohydrate metabolism and is found in greatest quantities in the liver, kidney and heart. In mammals, several genes often encode different isoforms, each of which differs in its tissue distribution and enzymatic activity []. The family described here bears a resemblance to the ATP-driven phospho-fructokinases, however, they share little sequence similarity, although a few residues seem key to their interaction with fructose 6-phosphate []. This domain forms the N-terminal region of this enzyme, while IPR013078 from INTERPRO forms the C-terminal domain.; GO: 0003873 6-phosphofructo-2-kinase activity, 0005524 ATP binding, 0006000 fructose metabolic process; PDB: 2DWO_A 3QPW_A 3QPV_A 3QPU_A 2I1V_B 2DWP_A 2AXN_A 1K6M_B 3BIF_A 2BIF_A ....
Probab=96.87 E-value=0.0012 Score=60.36 Aligned_cols=47 Identities=34% Similarity=0.711 Sum_probs=36.7
Q ss_pred CCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEEEcC
Q psy2709 169 FNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKVYDG 215 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i~~~ 215 (295)
+||||++++.++|++||+..|+.+-..|.+++......++++++.|+
T Consensus 148 ~spDY~~~~~e~A~~Df~~RI~~Ye~~YEpl~~e~d~~lsyIKiin~ 194 (222)
T PF01591_consen 148 NSPDYKGMDPEEAIEDFKKRIEHYEKVYEPLDEEEDEDLSYIKIINV 194 (222)
T ss_dssp TSGGGTTS-HHHHHHHHHHHHHHHHTT-----TTTTTTSEEEEEETT
T ss_pred CCcccccCCHHHHHHHHHHHHHhhcccccccccccccCceEEEEEcC
Confidence 58999999999999999999999999999887555778899998665
No 37
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=96.72 E-value=0.0023 Score=57.76 Aligned_cols=47 Identities=34% Similarity=0.467 Sum_probs=41.0
Q ss_pred cEEEEEcCCcCccccCCccCCCCCCCHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHhh
Q psy2709 37 KTFYFSRHGESEFNVLGRIGGDADLSPRGRLYAAALARHFNEA---------------------ARRTKQTVAGIHA 92 (295)
Q Consensus 37 ~~iylvRHGes~~n~~~~~~gD~~Lt~~G~~qA~~la~~l~~~---------------------l~Ra~qTA~~i~~ 92 (295)
+.+.++|||+..- ..||+.|++|+..+|++|.+. ..||+|||+.+..
T Consensus 4 ~v~~~~RHg~r~p---------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~ 71 (242)
T cd07061 4 QVQVLSRHGDRYP---------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLA 71 (242)
T ss_pred EEEEEEecCCCCc---------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHH
Confidence 3578999999853 469999999999999999874 7899999999977
No 38
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=95.83 E-value=0.02 Score=53.10 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=31.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHhh
Q psy2709 58 DADLSPRGRLYAAALARHFNEA--------------------ARRTKQTVAGIHA 92 (295)
Q Consensus 58 D~~Lt~~G~~qA~~la~~l~~~--------------------l~Ra~qTA~~i~~ 92 (295)
...||+.|.+|...+|++|.+. ..||++||..+..
T Consensus 60 ~g~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~ 114 (347)
T PF00328_consen 60 WGQLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQ 114 (347)
T ss_dssp TTSBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHH
T ss_pred CCcccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHH
Confidence 3459999999999999999987 8999999999876
No 39
>KOG0234|consensus
Probab=92.39 E-value=0.16 Score=50.83 Aligned_cols=55 Identities=25% Similarity=0.482 Sum_probs=47.6
Q ss_pred CeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcccccccceEEEcC
Q psy2709 160 DNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYETINPKLEARYSYVKVYDG 215 (295)
Q Consensus 160 ~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~~~~~~~l~i~~~ 215 (295)
.||--+.|. ||||++++.++|+.||+..+++...++.|+|.....++.++++.|+
T Consensus 157 ~NI~~~~~~-spdy~~~~~e~a~~dfl~ri~~ye~~YePld~~~d~~lsyik~in~ 211 (438)
T KOG0234|consen 157 NNIREVKHV-SPDYKGKDQEEALKDFLKRIRNYEKYYEPLDRARDKDLSYIKIINV 211 (438)
T ss_pred hhhhhhhhc-CCCcCCCCHHHHHHHHHHHHHhhhhccCcCChhhccccceEEEecc
Confidence 455556776 8999999999999999999999999999887666788999999764
No 40
>KOG3720|consensus
Probab=89.21 E-value=0.8 Score=45.59 Aligned_cols=55 Identities=24% Similarity=0.279 Sum_probs=41.0
Q ss_pred EEEEEcCCcCcc-c---cCCcc-------CCCCCCCHHHHHHHHHHHHHHHHH-----------------------HHHH
Q psy2709 38 TFYFSRHGESEF-N---VLGRI-------GGDADLSPRGRLYAAALARHFNEA-----------------------ARRT 83 (295)
Q Consensus 38 ~iylvRHGes~~-n---~~~~~-------~gD~~Lt~~G~~qA~~la~~l~~~-----------------------l~Ra 83 (295)
...+-|||...- + ....+ .|=..||++|.+|+..||++|++. .-||
T Consensus 37 v~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nRt 116 (411)
T KOG3720|consen 37 VQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGWGQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNRT 116 (411)
T ss_pred EEEEeecCCCCcccCCCCCCcccccccCCCCcchhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCccHH
Confidence 345669997652 1 11111 224569999999999999999993 8999
Q ss_pred HHHHHHHhh
Q psy2709 84 KQTVAGIHA 92 (295)
Q Consensus 84 ~qTA~~i~~ 92 (295)
+.||+.+.+
T Consensus 117 l~SAqs~la 125 (411)
T KOG3720|consen 117 LMSAQSVLA 125 (411)
T ss_pred HHHHHHHHH
Confidence 999999877
No 41
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=88.54 E-value=1.2 Score=44.34 Aligned_cols=56 Identities=18% Similarity=0.178 Sum_probs=40.6
Q ss_pred cEEEEEcCCcCcccc-----CCccCC---------CCCCCHHHHHHHHHHHHHHHHH-----------------------
Q psy2709 37 KTFYFSRHGESEFNV-----LGRIGG---------DADLSPRGRLYAAALARHFNEA----------------------- 79 (295)
Q Consensus 37 ~~iylvRHGes~~n~-----~~~~~g---------D~~Lt~~G~~qA~~la~~l~~~----------------------- 79 (295)
+-+.|.|||-..--. ...+.+ ...||++|..+-..+|+++++.
T Consensus 33 ~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~ 112 (413)
T PRK10173 33 QVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYAN 112 (413)
T ss_pred EEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeC
Confidence 458899999643211 111111 4569999999999999988766
Q ss_pred -HHHHHHHHHHHhh
Q psy2709 80 -ARRTKQTVAGIHA 92 (295)
Q Consensus 80 -l~Ra~qTA~~i~~ 92 (295)
..||++||+.+..
T Consensus 113 ~~~RT~~Sa~afl~ 126 (413)
T PRK10173 113 SLQRTVATAQFFIT 126 (413)
T ss_pred CchHHHHHHHHHHH
Confidence 8999999988754
No 42
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=88.31 E-value=4.7 Score=40.68 Aligned_cols=55 Identities=24% Similarity=0.184 Sum_probs=39.2
Q ss_pred EEEEEcCCcCccccC----Cc-----c----CCCCCCCHHHHHHHHHHHHHHHHH------------------------H
Q psy2709 38 TFYFSRHGESEFNVL----GR-----I----GGDADLSPRGRLYAAALARHFNEA------------------------A 80 (295)
Q Consensus 38 ~iylvRHGes~~n~~----~~-----~----~gD~~Lt~~G~~qA~~la~~l~~~------------------------l 80 (295)
-+.|.|||-..--.. .. + .|...||++|..|...+|+++++. .
T Consensus 37 Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~~ 116 (436)
T PRK10172 37 VVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADVD 116 (436)
T ss_pred EEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCCc
Confidence 366889996532110 11 1 124569999999999999988766 6
Q ss_pred HHHHHHHHHHhh
Q psy2709 81 RRTKQTVAGIHA 92 (295)
Q Consensus 81 ~Ra~qTA~~i~~ 92 (295)
.||+.||+.+..
T Consensus 117 ~RTi~SAqafl~ 128 (436)
T PRK10172 117 QRTRKTGEAFLA 128 (436)
T ss_pred hHHHHHHHHHHH
Confidence 799999988755
No 43
>PRK00035 hemH ferrochelatase; Reviewed
Probab=50.01 E-value=1.7e+02 Score=27.90 Aligned_cols=25 Identities=32% Similarity=0.375 Sum_probs=20.4
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHH
Q psy2709 54 RIGGDADLSPRGRLYAAALARHFNE 78 (295)
Q Consensus 54 ~~~gD~~Lt~~G~~qA~~la~~l~~ 78 (295)
.++|-+||...-++|+++|++.|.+
T Consensus 65 ~ig~gSPl~~~t~~q~~~L~~~l~~ 89 (333)
T PRK00035 65 SIGGGSPLNVITRRQAEALQAELAA 89 (333)
T ss_pred HcCCCChhHHHHHHHHHHHHHHHhc
Confidence 3455789999999999999998863
No 44
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=40.21 E-value=45 Score=27.07 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=27.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEec
Q psy2709 135 RYPWGESYVDIMQRIRPVLLELEREDNLLVEML 167 (295)
Q Consensus 135 ~~p~gES~~d~~~Ri~~~l~~l~~~~~vLvVsH 167 (295)
.+..+++..++.+|++.++.++..++.|+|.|-
T Consensus 34 ~~~~~~~~~~~~~~l~~~i~~~~~~~~vivltD 66 (116)
T TIGR00824 34 PFVPGENAETLQEKYNAALADLDTEEEVLFLVD 66 (116)
T ss_pred EcCCCcCHHHHHHHHHHHHHhcCCCCCEEEEEe
Confidence 455689999999999999999977777887775
No 45
>PRK10481 hypothetical protein; Provisional
Probab=36.02 E-value=58 Score=30.01 Aligned_cols=69 Identities=23% Similarity=0.385 Sum_probs=49.5
Q ss_pred CCCccCCCCHHHHHhhChHHHHhhhhCcccCCCCCCC----CHHHHHHHHHHHHHHHHcC--CeEEEEecCCCccccCCc
Q psy2709 104 DAGVCEGYSYEEMQDKFPQEFAWRDQDKLRYRYPWGE----SYVDIMQRIRPVLLELERE--DNLLVEMLQFNKDYKNMS 177 (295)
Q Consensus 104 ~~G~~eg~~~~ei~~~~p~~~~~~~~d~~~~~~p~gE----S~~d~~~Ri~~~l~~l~~~--~~vLvVsHg~~~~~~~~~ 177 (295)
.+|..+|++.+|+.++|+..- ..+.+-.|..+|. |-.-+..|+...+.+|+++ +-|++.|-| |+.+..
T Consensus 33 ~~g~Ld~l~~~ei~~~~ap~~---~~~~lvtrL~dG~~v~~s~~~v~~~lq~~i~~l~~~g~d~ivl~Ctg---dfp~l~ 106 (224)
T PRK10481 33 HAGLLDGLSREEIMAAYAPEA---GEDVLVTRLNDGQQVHVSKQKVERDLQSVIEVLDNQGYDVILLLCTG---EFPSLT 106 (224)
T ss_pred EecccCCCCHHHHHHhcCCCC---CCceeEEEecCCCEEEEEHHHHHHHHHHHHHHHHhCCCCEEEEEecC---CCCCcc
Confidence 479999999999977665421 2333444666665 4568888999999999887 888999988 444444
Q ss_pred H
Q psy2709 178 E 178 (295)
Q Consensus 178 ~ 178 (295)
.
T Consensus 107 a 107 (224)
T PRK10481 107 A 107 (224)
T ss_pred c
Confidence 4
No 46
>KOG1057|consensus
Probab=35.80 E-value=33 Score=37.26 Aligned_cols=34 Identities=29% Similarity=0.422 Sum_probs=30.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHhh
Q psy2709 59 ADLSPRGRLYAAALARHFNEA--------------------------ARRTKQTVAGIHA 92 (295)
Q Consensus 59 ~~Lt~~G~~qA~~la~~l~~~--------------------------l~Ra~qTA~~i~~ 92 (295)
..||..|+.||.+||+.|... -.|-+-||++++.
T Consensus 510 GelT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAk 569 (1018)
T KOG1057|consen 510 GELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAK 569 (1018)
T ss_pred CEecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHH
Confidence 459999999999999999876 6788999999876
No 47
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=32.75 E-value=1.4e+02 Score=28.45 Aligned_cols=37 Identities=8% Similarity=0.062 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHcC--CeEEEEecCCCccccCCcHHHHHHHHHHHHHHHHHHhh
Q psy2709 143 VDIMQRIRPVLLELERE--DNLLVEMLQFNKDYKNMSEEKALDDFQHKMEHFLEVYE 197 (295)
Q Consensus 143 ~d~~~Ri~~~l~~l~~~--~~vLvVsHg~~~~~~~~~~~~~~~~~~~vir~ll~~l~ 197 (295)
..+..|+...+..+... .+|+||+|| .--..++.++.
T Consensus 174 ~~~~ari~Aa~~~~~~~~~~~ivlIg~G------------------~gA~~~~~~la 212 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQQGGKNIVLIGHG------------------TGAGWAARYLA 212 (310)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeC------------------hhHHHHHHHHh
Confidence 35666777777776665 669999999 77777777777
No 48
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=32.44 E-value=66 Score=33.31 Aligned_cols=66 Identities=29% Similarity=0.313 Sum_probs=43.2
Q ss_pred CHHHHHhhChHHHHhhhhCcccCCCCCCCCHHHHHHHHHH--HHHHHHcC-CeEEEEecCCCccccCCcHHHHHHHHH
Q psy2709 112 SYEEMQDKFPQEFAWRDQDKLRYRYPWGESYVDIMQRIRP--VLLELERE-DNLLVEMLQFNKDYKNMSEEKALDDFQ 186 (295)
Q Consensus 112 ~~~ei~~~~p~~~~~~~~d~~~~~~p~gES~~d~~~Ri~~--~l~~l~~~-~~vLvVsHg~~~~~~~~~~~~~~~~~~ 186 (295)
|-.|+|.---..-..++.|-+ -|..--||.|+.||+.. ++++|.+. +.|+||-|- .+--|.|.||.
T Consensus 215 SGGELQr~aIaa~l~rdADvY--~FDEpsSyLDi~qRl~~ar~Irel~~~~k~ViVVEHD-------LavLD~lsD~v 283 (591)
T COG1245 215 SGGELQRVAIAAALLRDADVY--FFDEPSSYLDIRQRLNAARVIRELAEDGKYVIVVEHD-------LAVLDYLSDFV 283 (591)
T ss_pred CchHHHHHHHHHHHhccCCEE--EEcCCcccccHHHHHHHHHHHHHHhccCCeEEEEech-------HHHHHHhhhee
Confidence 344555422222223444544 44455899999999765 58888885 889999997 66667777764
No 49
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=25.41 E-value=99 Score=24.64 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=28.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEec
Q psy2709 135 RYPWGESYVDIMQRIRPVLLELEREDNLLVEML 167 (295)
Q Consensus 135 ~~p~gES~~d~~~Ri~~~l~~l~~~~~vLvVsH 167 (295)
.++.+++..++..++...+.++..++.|||++-
T Consensus 33 ~~~~~~~~~~~~~~l~~~i~~~~~~~~vlil~D 65 (116)
T PF03610_consen 33 DLYPDESIEDFEEKLEEAIEELDEGDGVLILTD 65 (116)
T ss_dssp EETTTSCHHHHHHHHHHHHHHCCTTSEEEEEES
T ss_pred ECcCCCCHHHHHHHHHHHHHhccCCCcEEEEee
Confidence 355679999999999999988887888888864
No 50
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=24.60 E-value=1.7e+02 Score=27.11 Aligned_cols=52 Identities=15% Similarity=0.035 Sum_probs=34.7
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCeEEEEecCCCc------------cccCCcHHHHHHHHHHHHH
Q psy2709 139 GESYVDIMQRIRPVLLELEREDNLLVEMLQFNK------------DYKNMSEEKALDDFQHKME 190 (295)
Q Consensus 139 gES~~d~~~Ri~~~l~~l~~~~~vLvVsHg~~~------------~~~~~~~~~~~~~~~~vir 190 (295)
-+|+.|.++|+-..+.....++..++|+|++-. |++--..+-+=+||...|.
T Consensus 126 i~s~~eA~~~ive~~~~~~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~ 189 (238)
T cd07397 126 VISLEESAQRIIAAAKKAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAIS 189 (238)
T ss_pred CCCHHHHHHHHHHHhhhcCCCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHH
Confidence 479999999998888655555778889999422 3333344445556655554
No 51
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=24.22 E-value=1.9e+02 Score=25.79 Aligned_cols=58 Identities=10% Similarity=0.114 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHHHHHcC---CeEEEEecCCCccc-cCCcHHHHHHHHHHHHHHHHHHhh
Q psy2709 140 ESYVDIMQRIRPVLLELERE---DNLLVEMLQFNKDY-KNMSEEKALDDFQHKMEHFLEVYE 197 (295)
Q Consensus 140 ES~~d~~~Ri~~~l~~l~~~---~~vLvVsHg~~~~~-~~~~~~~~~~~~~~vir~ll~~l~ 197 (295)
-+..++..|+..|+..|.+. ..||+|+|-..++. -+-...+-.++|...++-.+..+.
T Consensus 71 ~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~~l~ 132 (178)
T PF14606_consen 71 MSPEEFRERLDGFVKTIREAHPDTPILLVSPIPYPAGYFDNSRGETVEEFREALREAVEQLR 132 (178)
T ss_dssp CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE----TTTTS--TTS--HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCEEEEecCCccccccCchHHHHHHHHHHHHHHHHHHHH
Confidence 35568889999999999775 78999997655444 344446677888888888888876
No 52
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=24.20 E-value=1.2e+02 Score=28.54 Aligned_cols=23 Identities=13% Similarity=0.322 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHcCCeEEEEecC
Q psy2709 146 MQRIRPVLLELEREDNLLVEMLQ 168 (295)
Q Consensus 146 ~~Ri~~~l~~l~~~~~vLvVsHg 168 (295)
..+|+..+.+|..+=+|+||||.
T Consensus 185 T~kIEeLi~eLk~~yTIviVTHn 207 (253)
T COG1117 185 TLKIEELITELKKKYTIVIVTHN 207 (253)
T ss_pred HHHHHHHHHHHHhccEEEEEeCC
Confidence 46788999999988999999999
No 53
>PRK09191 two-component response regulator; Provisional
Probab=22.69 E-value=3.1e+02 Score=24.04 Aligned_cols=30 Identities=13% Similarity=0.149 Sum_probs=24.7
Q ss_pred CCCHHHHHHHHHHHHHHHHcC--CeEEEEecC
Q psy2709 139 GESYVDIMQRIRPVLLELERE--DNLLVEMLQ 168 (295)
Q Consensus 139 gES~~d~~~Ri~~~l~~l~~~--~~vLvVsHg 168 (295)
|.|...+..|+..++..+... .+|+++...
T Consensus 115 ~~s~~tV~~~l~ra~~~l~~~~~~~~liidd~ 146 (261)
T PRK09191 115 GVDPAEAEALLDDARAEIARQVATRVLIIEDE 146 (261)
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCeEEEEcCc
Confidence 567778888898888888765 789999988
No 54
>PF10655 DUF2482: Hypothetical protein of unknown function (DUF2482); InterPro: IPR018917 This entry is represented by Bacteriophage 80, Orf10. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. All the members of this very small, very short family are derived from bacteriophages, of the SA bacteriophages 11, Mu50B, system, and from the Staphylococcal_phi-Mu50B-like_prophages subsystem. All members are hypothetical proteins.
Probab=20.30 E-value=1.6e+02 Score=23.80 Aligned_cols=34 Identities=24% Similarity=0.418 Sum_probs=27.0
Q ss_pred CccccCCcHHHHHHHHHHHHHHHHHHhhhcCCcc
Q psy2709 170 NKDYKNMSEEKALDDFQHKMEHFLEVYETINPKL 203 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~vir~ll~~l~~~~~~~ 203 (295)
.++||||..+|-.+-...--+-|+.....++.-.
T Consensus 2 tknyKdMTqeelr~llseK~~ELydL~~eI~kET 35 (100)
T PF10655_consen 2 TKNYKDMTQEELRDLLSEKNGELYDLANEIDKET 35 (100)
T ss_pred cchhhhhhHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence 4789999999999988888888888877554433
Done!