BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2712
(602 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29RF7|PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A OS=Homo sapiens
GN=PDS5A PE=1 SV=1
Length = 1337
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 273/500 (54%), Gaps = 64/500 (12%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + AI L+ ++ + +E G+ P TA GL+LL
Sbjct: 609 EMVKFLLER-----IAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSGLELL 663
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQ-- 151
+LS+ +P F + ++LL+ L +ED+ VA + +R G + ++ Q
Sbjct: 664 KVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQI------FRNTGHKIETDLPQIR 717
Query: 152 --LVPICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKV 209
L+PI ++GTP QAKQA+ C++ + EV I + +
Sbjct: 718 STLIPILHQKAKRGTPHQAKQAVHCIHAIFTNK---EVQ-------------LAQIFEPL 761
Query: 210 KMNLTPDSP-NYRTAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKD 268
+L D P T +++LGHI+ P++F + +K+ V+ IVK+LL+ + + K
Sbjct: 762 SRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKL 821
Query: 269 WVFEEDLPNEVRCKMEGMKMMARWLLGLKAHK-ESAQKTFRMLNAVIVNKGDLLQSDKMS 327
W +E++ EV K++ +K++ RWLLG+K ++ +SA T R+L+A++V++GDL + ++S
Sbjct: 822 WSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRIS 881
Query: 328 KQEMAWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLIDEVPEVREIFANKLHKGLG 387
K +M+ +RL+AG A++K+ ++ + +PEQF + ++ DE +VR+IFA KLHK L
Sbjct: 882 KSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALV 941
Query: 388 RNLPNKCLPLDFMGFYALGGLEEEKKLK----------------------MSTEKALAQL 425
+ L LPL++M +AL + K+ + M+TEK L+
Sbjct: 942 KLL----LPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATEKLLS-- 995
Query: 426 PNFLPDFMLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKE 485
LP++++ + I +L H P +T ++ VD+L ++ CLWF+LE L+T+ +++ S F K+
Sbjct: 996 --LLPEYVVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTK-NENNSHAFMKK 1052
Query: 486 MIDQMKNCKDALNPDDENTN 505
M + +K +DA +PD+ TN
Sbjct: 1053 MAENIKLTRDAQSPDESKTN 1072
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ I+T A+RD +V ++ LL FV+ERTLDK+
Sbjct: 367 VRSHDPEEAIRHDVIVTIITAAKRDLALV--NDQLLGFVRERTLDKR 411
>sp|A4L9P7|PDS5A_RAT Sister chromatid cohesion protein PDS5 homolog A OS=Rattus norvegicus
GN=Pds5a PE=2 SV=1
Length = 1333
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 151/500 (30%), Positives = 273/500 (54%), Gaps = 64/500 (12%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + AI L+ ++ + +E G+ P +A GL+LL
Sbjct: 608 EMVKFLLER-----IAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELL 662
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQ-- 151
+LS+ +P F + ++LL+ L +ED+ VA + +R G + ++ Q
Sbjct: 663 KVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQI------FRNTGHKIETDLPQIR 716
Query: 152 --LVPICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKV 209
L+PI ++GTP QAKQA+ C++ + EV I + +
Sbjct: 717 STLIPILHQKAKRGTPHQAKQAVHCIHAIFSNK---EVQ-------------LAQIFEPL 760
Query: 210 KMNLTPDSP-NYRTAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKD 268
+L D P T +++LGHI+ P++F + +K+ V+ IVK+LL+ + + K
Sbjct: 761 SRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKL 820
Query: 269 WVFEEDLPNEVRCKMEGMKMMARWLLGLKAHK-ESAQKTFRMLNAVIVNKGDLLQSDKMS 327
W +E++ EV K++ +K++ RWLLG+K ++ +SA T R+L+A++V++GDL + ++S
Sbjct: 821 WSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRIS 880
Query: 328 KQEMAWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLIDEVPEVREIFANKLHKGLG 387
K +M+ +RL+AG A++K+ ++ + +PEQF + ++ DE +VR+IFA KLHK L
Sbjct: 881 KSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALV 940
Query: 388 RNLPNKCLPLDFMGFYALGGLEEEKKLK----------------------MSTEKALAQL 425
+ L LPL++M +AL + K+ + M+TEK L+
Sbjct: 941 KLL----LPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATEKLLS-- 994
Query: 426 PNFLPDFMLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKE 485
LP++++ + I +L H P +T ++ VD+L ++ CLWF+LE L+T+ +++ S F K+
Sbjct: 995 --LLPEYVVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTK-NENNSHAFMKK 1051
Query: 486 MIDQMKNCKDALNPDDENTN 505
M + +K +DA +PD+ TN
Sbjct: 1052 MAENIKLTRDAQSPDEAKTN 1071
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ I+T A+RD +V ++ LL FV+ERTLDK+
Sbjct: 366 VRSHDPEEAIRHDVIVTIITAAKRDLALV--NDQLLGFVRERTLDKR 410
>sp|Q5F3V3|PDS5A_CHICK Sister chromatid cohesion protein PDS5 homolog A OS=Gallus gallus
GN=PDS5A PE=2 SV=2
Length = 1330
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 269/496 (54%), Gaps = 56/496 (11%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + AI L+ ++ + +E G+ P TA GL+LL
Sbjct: 603 EMVKFLLER-----IAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRAGLELL 657
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQ-- 151
+LS+ +P F + ++LL+ L +ED+ VA + +R G + ++ Q
Sbjct: 658 KVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQI------FRNTGHKIETDLPQIR 711
Query: 152 --LVPICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKV 209
L+PI ++GTP QAKQA+ C++ + EV I + +
Sbjct: 712 STLIPILHQKAKRGTPHQAKQAVHCIHAIFSNK---EVQ-------------LAQIFEPL 755
Query: 210 KMNLTPDSP-NYRTAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKD 268
+L D P T +++LGHI+ P++F + +K+ V+ +VK+LL+ + + K
Sbjct: 756 SRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFVVKDLLMNDRSTGEKNGKL 815
Query: 269 WVFEEDLPNEVRCKMEGMKMMARWLLGLKAHK-ESAQKTFRMLNAVIVNKGDLLQSDKMS 327
W +E++ EV K++ +K++ RWLLG+K ++ +SA T R+L+A++V++GDL + ++S
Sbjct: 816 WSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRIS 875
Query: 328 KQEMAWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLIDEVPEVREIFANKLHKGLG 387
K +M+ +RL+AG A++K+ ++ + +PEQF + ++ DE +VR+IFA KLHK L
Sbjct: 876 KSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALV 935
Query: 388 RNLPNKCLPLDFMGFYALGGLEEEKKLKMSTEKAL------------------AQLPNFL 429
+ L LPL++M +AL + K+ + + L +L + L
Sbjct: 936 KLL----LPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMANEKLLSLL 991
Query: 430 PDFMLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQ 489
P++++ + I +L H P +T + VD+L ++ CLWF+LE L+T+ +++ S F K+M +
Sbjct: 992 PEYVVPYMIHLLAHDPDFTKPQDVDQLRDVKECLWFMLEVLMTK-NENNSHAFMKKMAEN 1050
Query: 490 MKNCKDALNPDDENTN 505
+K +DA +PD+ N
Sbjct: 1051 IKLTRDAQSPDEPKAN 1066
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ I+T +RD +V ++ LL FV+ERTLDK+
Sbjct: 361 VRSHDPEEAIRHDVIVTIITAGKRDLSLV--NDQLLGFVRERTLDKR 405
>sp|Q4KLU7|PD5AB_XENLA Sister chromatid cohesion protein PDS5 homolog A-B OS=Xenopus laevis
GN=pds5a-b PE=1 SV=1
Length = 1323
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 266/496 (53%), Gaps = 56/496 (11%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + AI L+ ++ + +E G+ P +A GL+LL
Sbjct: 601 EMVKFLLER-----IAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRAGLELL 655
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQ-- 151
+LS+ +P F + ++LL+ L +ED+ VA + +R G + ++ Q
Sbjct: 656 KVLSFTHPTSFHSDETYESLLQCLRMEDDKVAEAAIQI------FRNTGHRIETDLPQIR 709
Query: 152 --LVPICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKV 209
L+PI ++GTP QAKQA+ C++ + EV I + +
Sbjct: 710 SALIPILHQKAKRGTPHQAKQAVHCIHSIFSNK---EVQ-------------LAQIFEPL 753
Query: 210 KMNLTPDSP-NYRTAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKD 268
+L D P T +++LGHI+ P++F + +K+ V+ IVK+LL+ + + K
Sbjct: 754 SRSLNADVPEQLVTPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSNGDKNGKL 813
Query: 269 WVFEEDLPNEVRCKMEGMKMMARWLLGLKAHK-ESAQKTFRMLNAVIVNKGDLLQSDKMS 327
W +E++ EV K + +K++ RWLLG+K ++ +SA T R+L+A++V++GDL + ++S
Sbjct: 814 WCPDEEVSPEVLAKGQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRIS 873
Query: 328 KQEMAWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLIDEVPEVREIFANKLHKGLG 387
K +M+ +RL+AG A++K+ ++ + +PEQF + ++ DE +VR+IFA KLHK L
Sbjct: 874 KSDMSRLRLAAGAAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALV 933
Query: 388 RNLPNKCLPLDFMGFYALGGLEEEKKLKMSTEKAL------------------AQLPNFL 429
+ LPL++M +AL + K+ + + L +L + L
Sbjct: 934 KLQ----LPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPVSNEKLLSLL 989
Query: 430 PDFMLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQ 489
P++++ + I +L H P +T + +D+L ++ CLWF+LE L+T+ +++ S F K++ +
Sbjct: 990 PEYVVPYMIHLLAHDPDFTKPQDIDQLRDIKECLWFMLEVLMTK-NENNSHAFMKKLCEN 1048
Query: 490 MKNCKDALNPDDENTN 505
+K +DA PDD N
Sbjct: 1049 IKQTRDAQAPDDPKAN 1064
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ I+T A++D +V ++ LL FV+ERTLDK+
Sbjct: 359 VRSHDPEEAIRHDVIVTIITAAKKDLFLV--NDQLLGFVRERTLDKR 403
>sp|Q4QXM3|PD5AA_XENLA Sister chromatid cohesion protein PDS5 homolog A-A OS=Xenopus laevis
GN=pds5a-a PE=1 SV=1
Length = 1323
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 266/496 (53%), Gaps = 56/496 (11%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + AI L+ ++ + +E G+ P +A GL+LL
Sbjct: 601 EMVKFLLER-----IAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRAGLELL 655
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQ-- 151
+LS+ +P F + ++LL+ L +ED+ VA + +R G + ++ Q
Sbjct: 656 KVLSFTHPTSFHSDETYESLLQCLRMEDDKVAEAAIQI------FRNTGHRIETDLPQIR 709
Query: 152 --LVPICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKV 209
L+PI ++GTP QAKQA+ C++ + EV I + +
Sbjct: 710 SALIPILHQKAKRGTPHQAKQAVHCIHSIFSNK---EVQ-------------LAQIFEPL 753
Query: 210 KMNLTPDSP-NYRTAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKD 268
+L D P T +++LGHI+ P++F + +K+ V+ IVK+LL+ + + K
Sbjct: 754 SRSLNADVPEQLVTPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSNGDKNGKL 813
Query: 269 WVFEEDLPNEVRCKMEGMKMMARWLLGLKAHK-ESAQKTFRMLNAVIVNKGDLLQSDKMS 327
W +E++ EV K + +K++ RWLLG+K ++ +SA T R+L+A++V++GDL + ++S
Sbjct: 814 WCPDEEVSPEVLAKGQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRIS 873
Query: 328 KQEMAWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLIDEVPEVREIFANKLHKGLG 387
K +M+ +RL+AG A++K+ ++ + +PEQF + ++ DE +VR+IFA KLHK L
Sbjct: 874 KSDMSRLRLAAGAAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALV 933
Query: 388 RNLPNKCLPLDFMGFYALGGLEEEKKLKMSTEKAL------------------AQLPNFL 429
+ LPL++M +AL + K+ + + L +L + L
Sbjct: 934 KLQ----LPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPVSNEKLLSLL 989
Query: 430 PDFMLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQ 489
P++++ + I +L H P +T + +D+L ++ CLWF+LE L+T+ +++ S F K++ +
Sbjct: 990 PEYVVPYMIHLLAHDPDFTKPQDIDQLRDIKECLWFMLEVLMTK-NENNSHAFMKKLCEN 1048
Query: 490 MKNCKDALNPDDENTN 505
+K +DA PDD N
Sbjct: 1049 IKQTRDAQAPDDPKAN 1064
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ I+T A++D +V ++ LL FV+ERTLDK+
Sbjct: 359 VRSHDPEEAIRHDVIVTIITAAKKDLFLV--NDQLLGFVRERTLDKR 403
>sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis
GN=pds5b-b PE=2 SV=2
Length = 1464
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 260/493 (52%), Gaps = 50/493 (10%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + +I LI V+ ++ ++ G+ A GL+LL
Sbjct: 599 EMIKFLLER-----IAPVHIDTESISSLIKLVNKSIDGTADDEDEGVPTDQAIRAGLELL 653
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQLV 153
+LS+ +P F + ++LL L ++DE VA + G + E F L+
Sbjct: 654 KVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGNK--IEEDFPHIRSALL 711
Query: 154 PICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKVKMNL 213
P+ Q +KG+P+QAK +I C++ T F I + + +L
Sbjct: 712 PVLQQKAKKGSPRQAKYSIHCIHAIFSSKET----------------QFAQIFEPLHKSL 755
Query: 214 TPDSPNYR-TAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKDWVFE 272
P +P T+++ +GHIA P++F A +K+ V+ +VK+LL+ + + K WV +
Sbjct: 756 DPGNPEQLITSLVTIGHIAQLAPDQFTAPLKSMVATFVVKDLLMSDQLPGKKTTKLWVPD 815
Query: 273 EDLPNEVRCKMEGMKMMARWLLGLKAH-KESAQKTFRMLNAVIVNKGDLLQSDKMSKQEM 331
+++ E K++ +KMM RWLLG+K + +S T R+L A++ GDL + K+SK +M
Sbjct: 816 DEVSQETMVKIQAIKMMVRWLLGMKNNLSKSGNSTLRLLTAILHTDGDLTEHGKLSKPDM 875
Query: 332 AWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLI-DEVPEVREIFANKLHKGLGRNL 390
+ +RL+AG A++K+ ++ + + EQ Y L L+I DE +VR++FA KLHKGL R
Sbjct: 876 SRLRLAAGSAIVKLAQEPCYHEIITLEQ-YQLCALVINDECYQVRQLFAQKLHKGLSRLR 934
Query: 391 PNKCLPLDFMGFYALGGLEEEKKLKMSTEKALA------------------QLPNFLPDF 432
LPL++M AL + K+ + + L +L + LP++
Sbjct: 935 ----LPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLFSLLPEY 990
Query: 433 MLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQMKN 492
++ + + +LTH P Y + +++L ++ CLWF+LE L+++ +++ S F ++M++ +K
Sbjct: 991 VVPYTVHLLTHDPDYVKVQDIEQLKDIKECLWFVLEILMSK-NENNSHAFIRKMVEYIKQ 1049
Query: 493 CKDALNPDDENTN 505
KDA NPDD+ N
Sbjct: 1050 TKDAQNPDDQKMN 1062
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ +IVT A++D +V ++ LL FV+ERTLDK+
Sbjct: 357 VRSHDPEEAIRHDVIVSIVTAAKKDLLLV--NDQLLNFVRERTLDKR 401
>sp|A1L1F4|PDS5A_DANRE Sister chromatid cohesion protein PDS5 homolog A OS=Danio rerio
GN=pds5a PE=2 SV=1
Length = 1320
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 157/534 (29%), Positives = 280/534 (52%), Gaps = 62/534 (11%)
Query: 7 DENVRYEVVTAIVTTA--RRDFDIVSSSEDLLTFVKERT---------LDKKVMPHRLTG 55
DE +R ++ I T ++ V LTF K+ T L +++ P +
Sbjct: 561 DEKLRLQLEQLISPTCSCKQAEQCVREITRKLTFPKQPTNPFLEMVKFLLERIAPVHIDS 620
Query: 56 NAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLLVMLSYVYPCHFMQQSSIQALLK 115
AI L+ ++ + ++ G+ P TA GL+LL +LS+ +P F + ++LL+
Sbjct: 621 EAISALVKLLNKSIEGTADDEDEGVTPDTAIRAGLELLKVLSFTHPTAFHSAETYESLLQ 680
Query: 116 MLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQ----LVPICQDMIEKGTPKQAKQA 171
L +ED+ VA + +R G+ + E+ Q L+PI ++GTP QAKQA
Sbjct: 681 CLKMEDDKVAEAAIQI------FRNTGQKIETELPQIRSTLIPILHQKAKRGTPHQAKQA 734
Query: 172 IRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKVKMNLTPDSP-NYRTAIIALGHI 230
+ C I + N E V L I + + +L D P T +++LGHI
Sbjct: 735 VHC----------IHAIFHNKE-----VQL-AQIFEPLSRSLNADVPEQLITPLVSLGHI 778
Query: 231 AYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKDWVFEEDLPNEVRCKMEGMKMMA 290
+ P++F + +K+ V+ IVK+LL+ + + + W ++++ EV K++ +K++
Sbjct: 779 SMLAPDQFASPMKSIVANFIVKDLLMNDRSVGNKNGRLWTADDEVSPEVLAKVQAIKLLV 838
Query: 291 RWLLGLKAHK-ESAQKTFRMLNAVIVNKGDLLQSDKMSKQEMAWMRLSAGCAMLKICEQK 349
RWLLG+K ++ +SA T R+ +A++V++GDL + K+SK +M+ +RL+AG A+LK+ ++
Sbjct: 839 RWLLGMKNNQSKSANSTLRLPSAMLVSEGDLTEQKKISKSDMSRLRLAAGSAILKLAQEP 898
Query: 350 GVGDQYSPEQFYNLSRLLIDEVPEVREIFANKLHKGLGRNLPNKCLPLDFMGFYALGGLE 409
D +PEQF ++ DE +VR+I+A KLH L + L LPL++M +AL +
Sbjct: 899 CYHDIITPEQFQLCGLVINDECYQVRQIYAQKLHVALVKLL----LPLEYMAVFALCAKD 954
Query: 410 EEKKLKMSTEKAL------------------AQLPNFLPDFMLVFAIPVLTHTPAYTSNE 451
K+ + + L +L + LP++++ + I +L H P T +
Sbjct: 955 PVKERRAHARQCLLKNISVRREYIKQNPMAHEKLLSLLPEYVVPYMIHLLAHDPDLTKPQ 1014
Query: 452 AVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQMKNCKDALNPDDENTN 505
+++L ++ CLWF+LE L+T+ +++ S F ++M++ +K KDA PDD N
Sbjct: 1015 DLEQLRDVKECLWFMLEVLMTK-NENNSHSFLRKMVENIKQTKDAQCPDDPKAN 1067
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ I+ ++D ++V+ + LL FV+ER LDK+
Sbjct: 362 VRSHDPEEAIRHDVIVTIINAGKKDLNLVN--DQLLGFVRERMLDKR 406
>sp|Q498H0|PD5BA_XENLA Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis
GN=pds5b-a PE=1 SV=1
Length = 1448
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 257/493 (52%), Gaps = 50/493 (10%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + +I LI V+ ++ ++ G+ A GL+LL
Sbjct: 599 EMIKFLLER-----IAPVHIDTESISALIKLVNKSIDGTADDEDEGVTTDQAIRAGLELL 653
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQLV 153
+LS+ +P F + ++LL L ++DE VA + G + E F L+
Sbjct: 654 KVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSK--IEEDFPHIRSALL 711
Query: 154 PICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKVKMNL 213
P+ Q +KG P+QAK +I C+ T F I + + +L
Sbjct: 712 PVLQQKAKKGPPRQAKYSIHCIQAIFSSKET----------------QFAQIFEPLHKSL 755
Query: 214 TPDSPNYR-TAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKDWVFE 272
P +P T+++++GHIA P++F A +K+ V+ +VK+LL+ + + K WV +
Sbjct: 756 DPGNPEQLITSLVSIGHIAQLAPDQFTAPLKSMVATFVVKDLLMTDRLPGKKTTKLWVSD 815
Query: 273 EDLPNEVRCKMEGMKMMARWLLGLKAH-KESAQKTFRMLNAVIVNKGDLLQSDKMSKQEM 331
+++ E + K++ +KMM RWLLG+K + +S T R+L A++ GDL + K+SK +M
Sbjct: 816 DEVSTETKVKIQAIKMMVRWLLGMKNNLSKSGNSTLRLLMAILHTDGDLTEHGKLSKPDM 875
Query: 332 AWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLI-DEVPEVREIFANKLHKGLGRNL 390
+ +RL+A A++K+ ++ + + EQ Y L L+I DE +VR++FA K+HKGL R
Sbjct: 876 SRLRLAAASAIVKLAQEPCYHEIITLEQ-YQLCALVINDECYQVRQLFAQKIHKGLSRLR 934
Query: 391 PNKCLPLDFMGFYALGGLEEEKKLKMSTEKALA------------------QLPNFLPDF 432
LPL++M AL + K+ + + L +L + LP++
Sbjct: 935 ----LPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLFSLLPEY 990
Query: 433 MLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQMKN 492
++ + + +L H P Y + +++L ++ CLWF+LE L+++ +++ S F ++M++ +K
Sbjct: 991 VVPYTVHLLAHDPDYVKVQDIEQLKDIKECLWFVLEILMSK-NENNSHAFIRKMVEYIKQ 1049
Query: 493 CKDALNPDDENTN 505
KD NPDD+ N
Sbjct: 1050 TKDGQNPDDQKMN 1062
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ +IVT A++D +V ++ LL FV+ERTLDK+
Sbjct: 357 VRSHDPEEAIRHDVIVSIVTAAKKDLLLV--NDQLLNFVRERTLDKR 401
>sp|Q4VA53|PDS5B_MOUSE Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus
GN=Pds5b PE=1 SV=1
Length = 1446
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 252/493 (51%), Gaps = 50/493 (10%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + +I LI V+ ++ ++ G+ A GL+LL
Sbjct: 599 EMIKFLLER-----IAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELL 653
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQLV 153
+LS+ +P F + ++LL L ++DE VA + G + E F L+
Sbjct: 654 KVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSK--IEEDFPHIRSALL 711
Query: 154 PICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKVKMNL 213
P+ +KG P+QAK AI C++ T F I + + +L
Sbjct: 712 PVLHHKSKKGPPRQAKYAIHCIHAIFSSKET----------------QFAQIFEPLHKSL 755
Query: 214 TPDSPNYR-TAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKDWVFE 272
P + + T ++ +GHIA P++F A +K+ V+ IVK+LL+ + + K WV +
Sbjct: 756 DPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPD 815
Query: 273 EDLPNEVRCKMEGMKMMARWLLGLKA-HKESAQKTFRMLNAVIVNKGDLLQSDKMSKQEM 331
E++ E K++ +KMM RWLLG+K H +S T R+L ++ + GDL + K+SK +M
Sbjct: 816 EEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDM 875
Query: 332 AWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLI-DEVPEVREIFANKLHKGLGRNL 390
+ +RL+AG A++K+ ++ + + EQ Y L L I DE +VR++FA KLHKGL R
Sbjct: 876 SRLRLAAGSAIVKLAQEPCYHEIITLEQ-YQLCALAINDECYQVRQVFAQKLHKGLSRLR 934
Query: 391 PNKCLPLDFMGFYALGGLEEEKKLKMSTEKALA------------------QLPNFLPDF 432
LPL++M AL + K+ + + L +L + LP++
Sbjct: 935 ----LPLEYMAICALCAKDPVKERRAHARQCLVKNITVRREYLKQHAAVSEKLLSLLPEY 990
Query: 433 MLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQMKN 492
++ + I +L H P Y + +++L ++ CLWF+LE L+ + +++ S F ++M++ +K
Sbjct: 991 VVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAK-NENNSHAFIRKMVENIKQ 1049
Query: 493 CKDALNPDDENTN 505
KDA PDD N
Sbjct: 1050 TKDAQGPDDTKMN 1062
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ +IVT A++D +V ++ LL FV+ERTLDK+
Sbjct: 357 VRSHDPEEAIRHDVIVSIVTAAKKDILLV--NDHLLNFVRERTLDKR 401
>sp|Q6TRW4|PDS5B_RAT Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus
GN=Pds5b PE=2 SV=2
Length = 1447
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 252/493 (51%), Gaps = 50/493 (10%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + +I LI V+ ++ ++ G+ A GL+LL
Sbjct: 599 EMIKFLLER-----IAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELL 653
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQLV 153
+LS+ +P F + ++LL L ++DE VA + G + E F L+
Sbjct: 654 KVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSK--IEEDFPHIRSALL 711
Query: 154 PICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKVKMNL 213
P+ +KG P+QAK AI C++ T F I + + +L
Sbjct: 712 PVLHHKSKKGPPRQAKYAIHCIHAIFSSKET----------------QFAQIFEPLHKSL 755
Query: 214 TPDSPNYR-TAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKDWVFE 272
P + + T ++ +GHIA P++F A +K+ V+ IVK+LL+ + + K WV +
Sbjct: 756 DPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPD 815
Query: 273 EDLPNEVRCKMEGMKMMARWLLGLKA-HKESAQKTFRMLNAVIVNKGDLLQSDKMSKQEM 331
E++ E K++ +KMM RWLLG+K H +S T R+L ++ + GDL + K+SK +M
Sbjct: 816 EEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDM 875
Query: 332 AWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLI-DEVPEVREIFANKLHKGLGRNL 390
+ +RL+AG A++K+ ++ + + EQ Y L L I DE +VR++FA KLHKGL R
Sbjct: 876 SRLRLAAGSAIVKLAQEPCYHEIITLEQ-YQLCALAINDECYQVRQVFAQKLHKGLSRLR 934
Query: 391 PNKCLPLDFMGFYALGGLEEEKKLKMSTEKALA------------------QLPNFLPDF 432
LPL++M AL + K+ + + L +L + LP++
Sbjct: 935 ----LPLEYMAICALCAKDPVKERRAHARQCLVKNITVRREYLKQHAAVSEKLLSLLPEY 990
Query: 433 MLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQMKN 492
++ + I +L H P Y + +++L ++ CLWF+LE L+ + +++ S F ++M++ +K
Sbjct: 991 VVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAK-NENNSHAFIRKMVENIKQ 1049
Query: 493 CKDALNPDDENTN 505
KDA PDD N
Sbjct: 1050 TKDAQGPDDTKMN 1062
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ +IVT A++D +V ++ LL FV+ERTLDK+
Sbjct: 357 VRSHDPEEAIRHDVIVSIVTAAKKDILLV--NDHLLNFVRERTLDKR 401
>sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens
GN=PDS5B PE=1 SV=1
Length = 1447
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 252/493 (51%), Gaps = 50/493 (10%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + +I LI V+ ++ ++ G+ A GL+LL
Sbjct: 599 EMIKFLLER-----IAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELL 653
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQLV 153
+LS+ +P F + ++LL L ++DE VA + G + E F L+
Sbjct: 654 KVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSK--IEEDFPHIRSALL 711
Query: 154 PICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKVKMNL 213
P+ +KG P+QAK AI C++ T F I + + +L
Sbjct: 712 PVLHHKSKKGPPRQAKYAIHCIHAIFSSKET----------------QFAQIFEPLHKSL 755
Query: 214 TPDSPNYR-TAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKDWVFE 272
P + + T ++ +GHIA P++F A +K+ V+ IVK+LL+ + + K WV +
Sbjct: 756 DPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPD 815
Query: 273 EDLPNEVRCKMEGMKMMARWLLGLKA-HKESAQKTFRMLNAVIVNKGDLLQSDKMSKQEM 331
E++ E K++ +KMM RWLLG+K H +S T R+L ++ + GDL + K+SK +M
Sbjct: 816 EEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDM 875
Query: 332 AWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLI-DEVPEVREIFANKLHKGLGRNL 390
+ +RL+AG A++K+ ++ + + EQ Y L L I DE +VR++FA KLHKGL R
Sbjct: 876 SRLRLAAGSAIVKLAQEPCYHEIITLEQ-YQLCALAINDECYQVRQVFAQKLHKGLSRLR 934
Query: 391 PNKCLPLDFMGFYALGGLEEEKKLKMSTEKALA------------------QLPNFLPDF 432
LPL++M AL + K+ + + L +L + LP++
Sbjct: 935 ----LPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSLLPEY 990
Query: 433 MLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQMKN 492
++ + I +L H P Y + +++L ++ CLWF+LE L+ + +++ S F ++M++ +K
Sbjct: 991 VVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAK-NENNSHAFIRKMVENIKQ 1049
Query: 493 CKDALNPDDENTN 505
KDA PDD N
Sbjct: 1050 TKDAQGPDDAKMN 1062
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ +IVT A++D +V ++ LL FV+ERTLDK+
Sbjct: 357 VRSHDPEEAIRHDVIVSIVTAAKKDILLV--NDHLLNFVRERTLDKR 401
>sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus
GN=PDS5B PE=2 SV=3
Length = 1412
Score = 218 bits (556), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 251/493 (50%), Gaps = 50/493 (10%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + +I LI V+ ++ ++ G+ A GL+LL
Sbjct: 599 EMIKFLLER-----IAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELL 653
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQLV 153
+LS+ +P F + ++LL L ++DE VA + G + E F L+
Sbjct: 654 KVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGS--KIEEDFPHIRSALL 711
Query: 154 PICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKVKMNL 213
P+ +KG P+QAK AI C+ T F I + + +L
Sbjct: 712 PVLHHKAKKGPPRQAKYAIHCINAIFSSKET----------------QFAQIFEPLHKSL 755
Query: 214 TPDSPNYR-TAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKDWVFE 272
P + + T ++ +GHIA P++F A +K+ V+ IVK+LL+ + + K WV +
Sbjct: 756 DPSNFEHLITPLVTIGHIAMLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPD 815
Query: 273 EDLPNEVRCKMEGMKMMARWLLGLKA-HKESAQKTFRMLNAVIVNKGDLLQSDKMSKQEM 331
E++ E K++ +KMM RWLLG+K H +S T R+L ++ + GDL + K+SK +M
Sbjct: 816 EEVSPETLVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDM 875
Query: 332 AWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLI-DEVPEVREIFANKLHKGLGRNL 390
+ +RL+AG A++K+ ++ + + EQ Y L L I DE +VR+IFA KLHKGL R
Sbjct: 876 SRLRLAAGSAIVKLAQEPCYHEIITLEQ-YQLCALAINDECYQVRQIFAQKLHKGLSRLR 934
Query: 391 PNKCLPLDFMGFYALGGLEEEKKLKMSTEKALA------------------QLPNFLPDF 432
LPL++M AL + K+ + + L +L + LP++
Sbjct: 935 ----LPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSLLPEY 990
Query: 433 MLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKEMIDQMKN 492
++ + I +L H P Y + +++L ++ CLWFILE L+ + +++ S F ++M++ +K
Sbjct: 991 VVPYTIHLLAHDPDYVKVQDIEQLKDIKECLWFILEILMAK-NENNSHAFIRKMVENIKQ 1049
Query: 493 CKDALNPDDENTN 505
KDA PDD N
Sbjct: 1050 TKDAQGPDDAKMN 1062
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ +IVT A++D +V ++ LL FV+ERTLDK+
Sbjct: 357 VRSHDPEEAIRHDVIVSIVTAAKKDLLLV--NDHLLNFVRERTLDKR 401
>sp|Q6A026|PDS5A_MOUSE Sister chromatid cohesion protein PDS5 homolog A OS=Mus musculus
GN=Pds5a PE=3 SV=3
Length = 1332
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/500 (30%), Positives = 272/500 (54%), Gaps = 64/500 (12%)
Query: 34 DLLTFVKERTLDKKVMPHRLTGNAIPILISYVDDCLNHGNLIDELGLHPGTAGERGLKLL 93
+++ F+ ER + P + AI L+ ++ + +E G+ P +A GL+LL
Sbjct: 608 EMVKFLLER-----IAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELL 662
Query: 94 VMLSYVYPCHFMQQSSIQALLKMLTIEDEIVAPLVFSVLSFLGKYRPLGEVFKEEMKQ-- 151
+LS+ +P F + ++LL+ L +ED+ VA + +R G + ++ Q
Sbjct: 663 KVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQI------FRNTGHKIETDLPQIR 716
Query: 152 --LVPICQDMIEKGTPKQAKQAIRCLYKNLGDSYTIEVMDENSENGVRTVDLFVDILDKV 209
L+PI ++GTP QAKQA+ C++ + EV I + +
Sbjct: 717 STLIPILHQKAKRGTPHQAKQAVHCIHAIFSNK---EVQ-------------LAQIFEPL 760
Query: 210 KMNLTPDSP-NYRTAIIALGHIAYNMPNKFPAVIKNTVSRKIVKELLIKETEESYQYKKD 268
+L D P T +++LGHI+ P++F + +K+ V+ IVK+LL+ + + K
Sbjct: 761 SRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKL 820
Query: 269 WVFEEDLPNEVRCKMEGMKMMARWLLGLKAHK-ESAQKTFRMLNAVIVNKGDLLQSDKMS 327
W +E++ EV K+ ++++ RWLLG+K ++ +SA T R+L+A++V++GDL + ++S
Sbjct: 821 WSPDEEVSPEVLAKVYLLRLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRIS 880
Query: 328 KQEMAWMRLSAGCAMLKICEQKGVGDQYSPEQFYNLSRLLIDEVPEVREIFANKLHKGLG 387
K +M+ +RL+AG A++K+ ++ + +PEQF + ++ DE +VR+IFA KLHK L
Sbjct: 881 KSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALV 940
Query: 388 RNLPNKCLPLDFMGFYALGGLEEEKKLK----------------------MSTEKALAQL 425
+ L LPL++M +AL + K+ + M+TEK L+
Sbjct: 941 KLL----LPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATEKLLS-- 994
Query: 426 PNFLPDFMLVFAIPVLTHTPAYTSNEAVDELLVMRACLWFILEPLLTQPSDSFSSLFFKE 485
LP++++ + I +L H P +T ++ VD+L ++ CLWF+LE L+T+ +++ S F K+
Sbjct: 995 --LLPEYVVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTK-NENNSHAFMKK 1051
Query: 486 MIDQMKNCKDALNPDDENTN 505
M + +K +DA +PD+ TN
Sbjct: 1052 MAENIKLTRDAQSPDESKTN 1071
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 1 MRQHDTDENVRYEVVTAIVTTARRDFDIVSSSEDLLTFVKERTLDKK 47
+R HD +E +R++V+ I+T A+RD +V ++ LL FV+ERTLDK+
Sbjct: 366 VRSHDPEEAIRHDVIVTIITAAKRDLALV--NDQLLGFVRERTLDKR 410
>sp|Q85WU2|YCF1_PINKO Putative protein ycf1 OS=Pinus koraiensis PE=3 SV=2
Length = 2046
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 481 LFFKEMIDQMKNCKDALNPDDENTNNVSALDLNG-DENTNNVSALDLNG-DENTNNVSAL 538
L F + + +K + +N D N N+++A D+N D N + +A D+N D N N+++A
Sbjct: 1795 LMFLIIYEDLKGYEKYINARDSNANDINANDINANDINAKDSNANDINAKDSNANDINAN 1854
Query: 539 DLNG-DENTNNVSALDLNG-DENTNNVSALDLNGD 571
D N D N N+++A D+N D N N+++A D N D
Sbjct: 1855 DSNAKDSNANDINAKDINAKDSNANDINAKDSNAD 1889
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 511 DLNGDENTNNVSALDLNG-DENTNNVSALDLNG-DENTNNVSALDLNGDENTNNVSALDL 568
DL G E ++A D N D N N+++A D+N D N N+++A D N N+++A D
Sbjct: 1803 DLKGYEKY--INARDSNANDINANDINANDINAKDSNANDINA----KDSNANDINANDS 1856
Query: 569 NG-DENTNNVSALDLNG-DENTNNVSALDLNGD 599
N D N N+++A D+N D N N+++A D N D
Sbjct: 1857 NAKDSNANDINAKDINAKDSNANDINAKDSNAD 1889
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 525 DLNGDENTNNVSALDLNG-DENTNNVSALDLNG-DENTNNVSALDLNGDENTNNVSALDL 582
DL G E ++A D N D N N+++A D+N D N N+++A D N N+++A D
Sbjct: 1803 DLKGYEKY--INARDSNANDINANDINANDINAKDSNANDINA----KDSNANDINANDS 1856
Query: 583 NG-DENTNNVSALDLNGDESD 602
N D N N+++A D+N +S+
Sbjct: 1857 NAKDSNANDINAKDINAKDSN 1877
>sp|Q9HFF5|PDS5_SCHPO Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pds5 PE=1 SV=1
Length = 1205
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 19/222 (8%)
Query: 251 VKELLIKETEESYQYKKD-------WVFEEDLPNEVRCKMEGMKMMARWLLGLKAHKES- 302
V E L+K+ + + K D W E L N CK+ ++++ L E+
Sbjct: 781 VTEFLVKKVIQRFPEKYDDTHNDEEWCTYEKLDNLTMCKVLAIRVLVNRLRAAAGGTEAL 840
Query: 303 --AQKTFRMLNAVIVNKGDLLQSDKMSKQEMAWMRLSAGCAMLKICEQKGVGDQYSPEQF 360
++L +++ G+L K A++RL+A LK+C + +
Sbjct: 841 NIGAPIIKLLKVLLMADGELSPFKNTPKISRAYLRLTASKYFLKLCSIPFYAEHIDFSSY 900
Query: 361 YNLSRLLIDEVPEVREIFAN-KLHKGLGRNLPNKCLPLDFMGFYALGGLEEEKKLKMS-- 417
+S L DE +VR +F + + LP PL F+ A+ EEE K K S
Sbjct: 901 VQISLLCQDENFDVRNLFLTKLQKQLQLKKLPISYYPLLFLT--AVDP-EEEIKTKASIW 957
Query: 418 --TEKALAQ-LPNFLPDFMLVFAIPVLTHTPAYTSNEAVDEL 456
++ A Q +F +++ + I +L+H P +S E+ + L
Sbjct: 958 IRSQVAFFQKTHDFTMEYVATYLIHLLSHHPDISSIESENSL 999
>sp|C9ZN16|FAZ1_TRYB9 Flagellar attachment zone protein 1 OS=Trypanosoma brucei gambiense
(strain MHOM/CI/86/DAL972) GN=TbgDal_IV3690 PE=3 SV=1
Length = 1748
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 39/101 (38%)
Query: 502 ENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTN 561
EN L+L EN L+L EN L+L EN L+L EN
Sbjct: 1076 ENEKLAEELELKVAENEKLAEELELKAAENEKLAEELELKAAENEKLAEELELKAAENEK 1135
Query: 562 NVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDESD 602
L+L EN ALDL EN LDL E++
Sbjct: 1136 LAEELELKAAENEKLAEALDLKAAENEKLAEELDLKAAENE 1176
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 36/95 (37%)
Query: 502 ENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTN 561
EN L+L EN L+L EN L+L EN L+L EN
Sbjct: 1090 ENEKLAEELELKAAENEKLAEELELKAAENEKLAEELELKAAENEKLAEELELKAAENEK 1149
Query: 562 NVSALDLNGDENTNNVSALDLNGDENTNNVSALDL 596
ALDL EN LDL EN L+L
Sbjct: 1150 LAEALDLKAAENEKLAEELDLKAAENEKLAEELEL 1184
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 39/101 (38%)
Query: 502 ENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTN 561
EN L+L EN L+L EN L+L EN ALDL EN
Sbjct: 1104 ENEKLAEELELKAAENEKLAEELELKAAENEKLAEELELKAAENEKLAEALDLKAAENEK 1163
Query: 562 NVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDESD 602
LDL EN L+L EN L+L E++
Sbjct: 1164 LAEELDLKAAENEKLAEELELKVAENEKLAEELELKAAENE 1204
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 39/101 (38%)
Query: 502 ENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTN 561
EN L+L EN L+L EN ALDL EN LDL EN
Sbjct: 1118 ENEKLAEELELKAAENEKLAEELELKAAENEKLAEALDLKAAENEKLAEELDLKAAENEK 1177
Query: 562 NVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDESD 602
L+L EN L+L EN L+L E++
Sbjct: 1178 LAEELELKVAENEKLAEELELKAAENEKLAEELELKAAENE 1218
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 39/101 (38%)
Query: 502 ENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTN 561
EN L+L EN ALDL EN LDL EN L+L EN
Sbjct: 1132 ENEKLAEELELKAAENEKLAEALDLKAAENEKLAEELDLKAAENEKLAEELELKVAENEK 1191
Query: 562 NVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDESD 602
L+L EN L+L EN L+L E++
Sbjct: 1192 LAEELELKAAENEKLAEELELKAAENEKLAEELELKAAENE 1232
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 36/95 (37%)
Query: 502 ENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTNNVSALDLNGDENTN 561
EN ALDL EN LDL EN L+L EN L+L EN
Sbjct: 1146 ENEKLAEALDLKAAENEKLAEELDLKAAENEKLAEELELKVAENEKLAEELELKAAENEK 1205
Query: 562 NVSALDLNGDENTNNVSALDLNGDENTNNVSALDL 596
L+L EN L+L EN L+L
Sbjct: 1206 LAEELELKAAENEKLAEELELKAAENEKLAEELEL 1240
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,188,570
Number of Sequences: 539616
Number of extensions: 10248382
Number of successful extensions: 106998
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 347
Number of HSP's that attempted gapping in prelim test: 41043
Number of HSP's gapped (non-prelim): 21333
length of query: 602
length of database: 191,569,459
effective HSP length: 123
effective length of query: 479
effective length of database: 125,196,691
effective search space: 59969214989
effective search space used: 59969214989
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)