BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2713
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91309|F26_LITCT 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase OS=Lithobates
catesbeiana PE=2 SV=1
Length = 470
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 1 LRQFT--PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDI 58
+ QFT P ++ +VGLPARGKT ++ KL+RYL W +KVF+V YRR + YN++
Sbjct: 33 IPQFTNSPTMIVMVGLPARGKTYISKKLTRYLNWIGTPTKVFNVGQYRRDATQSYNNYQF 92
Query: 59 FRVDNTEGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGF 117
FR DN E IR+ A A +D +L + +G VA+ D T T E+R I FA++ G+
Sbjct: 93 FRADNQEAMKIRKQCALHALKDVHTYLSREEGHVAVFDATNTTRERRSVILQ-FAKERGY 151
Query: 118 KVLFVELIVQDEEILEHNIKQ-SMCSP 143
KV F+E I D +I+ NI Q + SP
Sbjct: 152 KVFFIESICDDPDIIAENITQVKLSSP 178
>sp|P07953|F261_RAT 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 OS=Rattus
norvegicus GN=Pfkfb1 PE=1 SV=3
Length = 471
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 1 LRQFT--PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDI 58
+ QFT P +V +VGLPARGKT ++ KL+RYL W +KVF++ YRR+ + Y +++
Sbjct: 35 IPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVS-YRNYEF 93
Query: 59 FRVDNTEGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGF 117
FR DNTE IR+ A A +D K+L + +G VA+ D T T E+R I FA++ G+
Sbjct: 94 FRPDNTEAQLIRKQCALAALKDVHKYLSREEGHVAVFDATNTTRERRSLILQ-FAKEHGY 152
Query: 118 KVLFVELIVQDEEILEHNIKQ 138
KV F+E I D EI+ NIKQ
Sbjct: 153 KVFFIESICNDPEIIAENIKQ 173
>sp|Q91348|F26L_CHICK 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase OS=Gallus
gallus PE=2 SV=2
Length = 470
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
Query: 3 QFT--PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFR 60
QFT P +V LVGL GKT ++ KL+RYL W ++VF+V YRR+ ++ Y +++ FR
Sbjct: 35 QFTNCPTMVILVGLRRPGKTYISRKLTRYLNWIGMPTRVFNVGQYRREAVQSYKNYEFFR 94
Query: 61 VDNTEGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQIHDYFARKMGFKV 119
DN E IR+ A A +D +L ++ G+VA+ D T T E+R I FAR+ G+KV
Sbjct: 95 HDNEEAMQIRRQCALAALQDVRTYLSSEEGQVAVFDATNTTRERRALIMQ-FARENGYKV 153
Query: 120 LFVELIVQDEEILEHNIKQ-SMCSP 143
LFVE I D I+E NIKQ + SP
Sbjct: 154 LFVESICDDPAIIEENIKQVKLSSP 178
>sp|Q5NVT1|F262_PONAB 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Pongo
abelii GN=PFKFB2 PE=2 SV=1
Length = 530
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 84/133 (63%), Gaps = 2/133 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
+P ++ ++GLPARGKT ++ KL+RYL W +KVF++ YRR+ ++ Y S+D FR DN
Sbjct: 37 SPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRHDNE 96
Query: 65 EGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E IR+ A A ED +L + +G++A+ D T T E+R I + FA + FKV FVE
Sbjct: 97 EAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILN-FAEQNSFKVFFVE 155
Query: 124 LIVQDEEILEHNI 136
+ D +++ NI
Sbjct: 156 SVCDDPDVIAANI 168
>sp|O60825|F262_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Homo
sapiens GN=PFKFB2 PE=1 SV=2
Length = 505
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 84/133 (63%), Gaps = 2/133 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
+P ++ ++GLPARGKT ++ KL+RYL W +KVF++ YRR+ ++ Y S+D FR DN
Sbjct: 37 SPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRHDNE 96
Query: 65 EGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E IR+ A A ED +L + +G++A+ D T T E+R I + FA + FKV FVE
Sbjct: 97 EAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILN-FAEQNSFKVFFVE 155
Query: 124 LIVQDEEILEHNI 136
+ D +++ NI
Sbjct: 156 SVCDDPDVIAANI 168
>sp|P70266|F261_MOUSE 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 OS=Mus
musculus GN=Pfkfb1 PE=2 SV=2
Length = 471
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 89/141 (63%), Gaps = 5/141 (3%)
Query: 1 LRQFT--PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDI 58
+ QFT P +V +VGLPARGKT ++ KL+RYL W +KVF++ YRR+ + Y +++
Sbjct: 35 IPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVS-YRNYEF 93
Query: 59 FRVDNTEGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGF 117
FR DN E IR+ A A +D K+L + +G VA+ D T T E+R I FA++ G+
Sbjct: 94 FRPDNMEAQLIRKQCALAALKDVHKYLSREEGHVAVFDATNTTRERRSLILQ-FAKEHGY 152
Query: 118 KVLFVELIVQDEEILEHNIKQ 138
KV F+E I D +I+ NIKQ
Sbjct: 153 KVFFIESICNDPDIIAENIKQ 173
>sp|P70265|F262_MOUSE 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Mus
musculus GN=Pfkfb2 PE=1 SV=2
Length = 519
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
+P ++ ++GLPARGKT ++ KL+RYL W +KVF++ YRR+ ++ Y S+D FR DN
Sbjct: 40 SPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYQSYDFFRHDNE 99
Query: 65 EGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E IR+ A A ED + + G++A+ D T T E+R I + FA++ FKV FVE
Sbjct: 100 EAMKIRKQCALVALEDVKAYFTEESGQIAVFDATNTTRERRDMILN-FAKQNAFKVFFVE 158
Query: 124 LIVQDEEILEHNI 136
+ D +++ NI
Sbjct: 159 SVCDDPDVIAANI 171
>sp|Q9JJH5|F262_RAT 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus
norvegicus GN=Pfkfb2 PE=2 SV=1
Length = 557
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
+P ++ ++GLPARGKT ++ KL+RYL W +KVF++ YRR+ ++ Y S+D FR DN
Sbjct: 40 SPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRHDNE 99
Query: 65 EGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E IR+ A A ED + + G++A+ D T T E+R I + FA++ FKV FVE
Sbjct: 100 EAMKIRKQCALVALEDVKAYFTEESGQIAVFDATNTTRERRDMILN-FAKQNAFKVFFVE 158
Query: 124 LIVQDEEILEHNI 136
+ D +++ NI
Sbjct: 159 SVCDDPDVIAANI 171
>sp|O35552|F263_RAT 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 OS=Rattus
norvegicus GN=Pfkfb3 PE=2 SV=1
Length = 555
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
+P V+ +VGLPARGKT ++ KL+RYL W +KVF+V YRR+ ++ Y+S++ FR DN
Sbjct: 34 SPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNE 93
Query: 65 EGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E +R+ A A D +L K G++A+ D T T E+R I +FA++ FK F+E
Sbjct: 94 EAMRVRKQCALAALRDVKSYLTKEGGQIAVFDATNTTRERRHMIL-HFAKENDFKAFFIE 152
Query: 124 LIVQDEEILEHNI 136
+ D ++ NI
Sbjct: 153 SVCDDPTVVASNI 165
>sp|Q5R9C1|F263_PONAB 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 OS=Pongo
abelii GN=PFKFB3 PE=2 SV=2
Length = 514
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
+P V+ +VGLPARGKT ++ KL+RYL W +KVF+V YRR+ ++ Y+S++ FR DN
Sbjct: 34 SPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNE 93
Query: 65 EGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E +R+ A A D +L K G++A+ D T T E+R I +FA++ FK F+E
Sbjct: 94 EAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMIL-HFAKENDFKAFFIE 152
Query: 124 LIVQDEEILEHNI 136
+ D ++ NI
Sbjct: 153 SVCDDPTVVASNI 165
>sp|Q16875|F263_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 OS=Homo
sapiens GN=PFKFB3 PE=1 SV=1
Length = 520
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
+P V+ +VGLPARGKT ++ KL+RYL W +KVF+V YRR+ ++ Y+S++ FR DN
Sbjct: 34 SPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNE 93
Query: 65 EGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E +R+ A A D +L K G++A+ D T T E+R I +FA++ FK F+E
Sbjct: 94 EAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMIL-HFAKENDFKAFFIE 152
Query: 124 LIVQDEEILEHNI 136
+ D ++ NI
Sbjct: 153 SVCDDPTVVASNI 165
>sp|P26285|F262_BOVIN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Bos
taurus GN=PFKFB2 PE=1 SV=2
Length = 531
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
+P ++ ++GLPARGKT ++ KL+RYL W +KVF++ YRR+ ++ Y S+D FR DN
Sbjct: 38 SPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRRQAVKSYKSYDFFRHDNE 97
Query: 65 EGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E IR+ A A +D +L + G++A+ D T T E+R I + FA + FKV FVE
Sbjct: 98 EAMKIRKQCALVALKDVKAYLTEESGQIAVFDATNTTRERRDLILN-FAEENSFKVFFVE 156
Query: 124 LIVQDEEILEHNI 136
+ D +++ NI
Sbjct: 157 SVCDDPDVIAANI 169
>sp|Q28901|F263_BOVIN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (Fragment)
OS=Bos taurus GN=PFKFB3 PE=2 SV=2
Length = 463
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
+P V+ +VGLPARGKT ++ KL+RYL W +KVF++ YRR ++ Y+S++ FR DN
Sbjct: 34 SPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNLGEYRRDGVKQYSSYNFFRPDNE 93
Query: 65 EGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E +R+ A A D +L K G++A+ D T T E+R I +F ++ FKV F+E
Sbjct: 94 EAMKVRKQCALAALRDVKSYLTKEGGQIAVFDATNTTRERRHMIL-HFPKENDFKVFFIE 152
Query: 124 LIVQDEEILEHNI 136
+ D ++ NI
Sbjct: 153 SVCDDPTVVASNI 165
>sp|P25114|F264_RAT 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 OS=Rattus
norvegicus GN=Pfkfb4 PE=1 SV=3
Length = 469
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
P ++ +VGLPARGKT ++ KL+RYL W ++ F+V YRR ++ Y S + F DN
Sbjct: 38 CPTLIVMVGLPARGKTYISKKLTRYLNWIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNE 97
Query: 65 EGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
EG IR+ A A D K+L + G VA+ D T T E+R I + F + G+K FVE
Sbjct: 98 EGLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFN-FGEQNGYKTFFVE 156
Query: 124 LIVQDEEILEHNIKQ 138
I D E++ NI Q
Sbjct: 157 SICVDPEVIAANIVQ 171
>sp|Q4R8B6|F264_MACFA 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 OS=Macaca
fascicularis GN=PFKFB4 PE=2 SV=3
Length = 469
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
P ++ +VGLPARGKT ++ KL+RYL W ++ F+V YRR ++ Y S + F DN
Sbjct: 38 CPTLIVMVGLPARGKTYISKKLTRYLNWIGVPTREFNVGQYRRNMVKTYKSFEFFLPDNE 97
Query: 65 EGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
EG IR+ A A D ++L + G VA+ D T T E+R I + F + G+K FVE
Sbjct: 98 EGLKIRKQCALAALRDVRRFLSEEGGHVAVFDATNTTRERRATIFN-FGEQNGYKTFFVE 156
Query: 124 LIVQDEEILEHNIKQ 138
I D E++ NI Q
Sbjct: 157 SICVDPEVIAANIVQ 171
>sp|P16118|F261_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 OS=Homo
sapiens GN=PFKFB1 PE=1 SV=3
Length = 471
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
Query: 1 LRQFT--PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDI 58
+ QFT P +V +VGLPARGKT ++ KL+RYL W +KVF++ YRR+ + Y +++
Sbjct: 35 IPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVS-YKNYEF 93
Query: 59 FRVDNTEGYNIRQLSAREAQEDATKWLKN-DGEVAIIDGTTATMEKRKQIHDYFARKMGF 117
F DN E IR+ A A +D +L + +G VA+ D T T E+R I FA++ G+
Sbjct: 94 FLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQ-FAKEHGY 152
Query: 118 KVLFVELIVQDEEILEHNIKQ 138
KV F+E I D I+ NI+Q
Sbjct: 153 KVFFIESICNDPGIIAENIRQ 173
>sp|Q6DTY7|F264_MOUSE 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 OS=Mus
musculus GN=Pfkfb4 PE=2 SV=4
Length = 469
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
P ++ +VGLPARGKT ++ KL+RYL W ++ F+V YRR ++ Y S + F DN
Sbjct: 38 CPTLIVMVGLPARGKTYISKKLTRYLNWIGVPTREFNVGQYRRDIVKTYKSFEFFLPDNE 97
Query: 65 EGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
EG IR+ A A D K+L + G VA+ D T T E+R I + F + G+K FVE
Sbjct: 98 EGLKIRKQCALAALSDVRKFLSEEGGHVAVFDATNTTRERRAMIFN-FGEQNGYKTFFVE 156
Query: 124 LIVQDEEILEHNIKQ 138
I D E++ NI Q
Sbjct: 157 SICVDPEVVAANIVQ 171
>sp|P49872|F261_BOVIN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 OS=Bos
taurus GN=PFKFB1 PE=2 SV=1
Length = 471
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 87/141 (61%), Gaps = 5/141 (3%)
Query: 1 LRQFT--PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDI 58
+ QFT P +V +VGLPARGKT ++ KL+RYL W +KVF++ YRR+ + Y +++
Sbjct: 35 IPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVS-YKNYEF 93
Query: 59 FRVDNTEGYNIRQLSAREAQEDATKWLKN-DGEVAIIDGTTATMEKRKQIHDYFARKMGF 117
F DN E IR+ A A +D +L + +G VA+ D T T E+R I FA++ G+
Sbjct: 94 FLPDNMEALLIRKQCALAALKDVHSYLSHEEGRVAVFDATNTTRERRSLILQ-FAKEHGY 152
Query: 118 KVLFVELIVQDEEILEHNIKQ 138
KV F+E I D +++ NI+Q
Sbjct: 153 KVFFIESICNDPDVIAENIRQ 173
>sp|Q16877|F264_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 OS=Homo
sapiens GN=PFKFB4 PE=2 SV=6
Length = 469
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 5 TPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNT 64
P ++ +VGLPARGKT ++ KL+RYL W ++ F+V YRR ++ Y S + F DN
Sbjct: 38 CPTLIVMVGLPARGKTYISKKLTRYLNWIGVPTREFNVGQYRRDVVKTYKSFEFFLPDNE 97
Query: 65 EGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
EG IR+ A A D ++L + G VA+ D T T E+R I + F + G+K FVE
Sbjct: 98 EGLKIRKQCALAALRDVRRFLSEEGGHVAVFDATNTTRERRATIFN-FGEQNGYKTFFVE 156
Query: 124 LIVQDEEILEHNIKQ 138
I D E++ NI Q
Sbjct: 157 SICVDPEVIAANIVQ 171
>sp|Q9MB58|F26_ARATH 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase OS=Arabidopsis
thaliana GN=FKFBP PE=1 SV=1
Length = 744
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 7 LVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNTEG 66
L + LVGLPARGKT A KL+RYL W H +K F+V YRR + S D FR DN EG
Sbjct: 343 LAIVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYRRLKHGVNMSADFFRADNPEG 402
Query: 67 YNIRQLSAREAQEDATKWLKNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVELIV 126
R A A ED W++ G+V I D T +T +R + K K++F+E +
Sbjct: 403 VEARTEVAALAMEDMIAWMQEGGQVGIFDATNSTRVRRNMLMKMAEGKC--KIIFLETLC 460
Query: 127 QDEEILEHNIK 137
DE I+E NI+
Sbjct: 461 NDERIIERNIR 471
>sp|Q21122|F26_CAEEL Probable 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase
OS=Caenorhabditis elegans GN=K02B2.1 PE=3 SV=2
Length = 457
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 6 PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNS-----HDIFR 60
P V+ +VGLPARGKT ++ KL RYL WT +KVF+V YRR ++ F
Sbjct: 29 PNVIVMVGLPARGKTYISKKLCRYLKWTGFTTKVFNVGEYRRSDANAADAIHGANASFFS 88
Query: 61 VDNTEGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQIHDYFARKMGFKV 119
+N + +R SAR A ED +L + G VAI D T T ++R+ I D F +K +
Sbjct: 89 PNNADALKVRAESARRAMEDMADYLNSGTGGVAIFDATNTTKDRRRIIID-FCKKQRLRC 147
Query: 120 LFVELIVQDEEILEHNI 136
F+E + D I++ N+
Sbjct: 148 FFIESVCDDPAIIDCNV 164
>sp|Q8TFH0|YIKE_SCHPO Probable 6-phosphofructo-2-kinase PB17E12.14c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB17E12.14c PE=1 SV=2
Length = 668
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Query: 7 LVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHD---IFRVDN 63
L + +VGLPARGK+ + +KL RY W + K F+V +RRKH +SHD F N
Sbjct: 191 LAIIMVGLPARGKSYIVNKLVRYYNWLQYNCKAFNVGNFRRKHAS--HSHDDASFFDPSN 248
Query: 64 TEGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFV 122
E +R+ A + + +W + DG V I D T +T ++RK I D+ ++ LF+
Sbjct: 249 EEASKLRESFAMDTLDALLQWFEEEDGVVGIFDATNSTSKRRKAIVDHLSKVPYVTTLFI 308
Query: 123 ELIVQDEEILEHNIKQSMCSP 143
E I DE+++ N++ + P
Sbjct: 309 ESICNDEQLIAANMRMKLVGP 329
>sp|Q9UTE1|YFMD_SCHPO Probable 6-phosphofructo-2-kinase C222.13c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC222.13c PE=3 SV=1
Length = 592
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Query: 7 LVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKH-LELYN-SHDIFRVDNT 64
L++ LVG+PA GK+ + KLSRY W + + FSV RR+ Y+ S D F + N
Sbjct: 144 LIIILVGIPATGKSYIGSKLSRYYNWLKYNCRFFSVGDKRREEGASTYSMSADFFDIKNE 203
Query: 65 EGYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVE 123
E + R+ A E ED W+ +G + I+D T +T E+RK ++D +++ ++F+E
Sbjct: 204 ETFKFRENVALETLEDLLHWMIHENGVIGILDATNSTHERRKHLYDRISKEADIGIMFLE 263
Query: 124 LIVQDEEILEHNIKQSMCSP 143
+ D+ + E NIK + P
Sbjct: 264 SLCTDDILFEENIKLKIKGP 283
>sp|P32604|F26_YEAST Fructose-2,6-bisphosphatase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FBP26 PE=1 SV=2
Length = 452
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Query: 7 LVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRK-HLELYNSHDIFRVDNTE 65
+ V +VGLPARGK+ ++ K+ RYL+W K+K F+V YRR + + F +NT+
Sbjct: 14 VCVIMVGLPARGKSFISQKIIRYLSWLSIKAKCFNVGNYRRDVSGNVPMDAEFFNFENTD 73
Query: 66 GYNIRQLSAREAQEDATKWL-KNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVEL 124
+ +R+L+A+ A +D + K DG VA+ D T +T ++RK + D K + +F+E
Sbjct: 74 NFKLRELAAQNAIKDIVNFFTKEDGSVAVFDATNSTRKRRKWLKD-ICEKNNIQPMFLES 132
Query: 125 IVQDEEILEHNIK 137
D E++ +N K
Sbjct: 133 WSNDHELIINNAK 145
>sp|Q9UTK9|YIVH_SCHPO Putative 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase
C144.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC144.17c PE=1 SV=2
Length = 449
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Query: 7 LVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNTEG 66
LV+ + GLPARGK+ +A + RYL W + +S++ Y + S + +
Sbjct: 53 LVIIMSGLPARGKSNIAVSIDRYLRWLGFNCRFYSLAKYIDERTREMTSSPVKSAASENH 112
Query: 67 YNIRQLSAREAQEDATKW-LKNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVELI 125
R + D + LK G+VAI D T T R+ ++D F + GFK+LF+E +
Sbjct: 113 VFSRNDTIERCLADLEIFLLKEKGQVAIYDATNGTRRTRRILYDRF-KNCGFKILFIESL 171
Query: 126 VQDEEILEHNIKQSM 140
E+++ NI++++
Sbjct: 172 CNKEDVINANIQEAI 186
>sp|P40433|6P21_YEAST 6-phosphofructo-2-kinase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PFK26 PE=1 SV=1
Length = 827
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 7 LVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHD----IFRVD 62
LV+ +VGLPA GK+ + +KLSR+L ++ + KVF+V RRK + + D F
Sbjct: 184 LVIVMVGLPATGKSFITNKLSRFLNYSLYYCKVFNVGNTRRKFAKEHGLKDQDSKFFEPK 243
Query: 63 NTEGYNIRQLSAREA-QEDATKWLKNDGEVAIIDGTTATMEKRKQIHDYF-ARKMGFKVL 120
N + +R A + E L+ G V I D T + E+RK + R KVL
Sbjct: 244 NADSTRLRDKWAMDTLDELLDYLLEGSGSVGIFDATNTSRERRKNVLARIRKRSPHLKVL 303
Query: 121 FVELIVQDEEILEHNIKQSMCSP 143
F+E + D +++ NI+ + P
Sbjct: 304 FLESVCSDHALVQKNIRLKLFGP 326
>sp|Q06137|YL345_YEAST Putative 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase
YLR345W OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=YLR345W PE=1 SV=1
Length = 509
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 7 LVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNTEG 66
++V LVGLPA KT+L+ ++RY W ++K F S Y+ + + + + EG
Sbjct: 84 ILVVLVGLPATSKTLLSVAITRYTRWLGVRTKSFHFSEYKESAKNIPSDYFCVVPTSKEG 143
Query: 67 YNIRQLSAREAQEDATKWLKN-DGEVAIIDGTTATMEKRKQIHDYFARKMGFKVLFVELI 125
+ + D + + G++AI D RK + F+ ++G KVLF+E I
Sbjct: 144 VAFVEKLRMQMLNDILAFFNDLSGQLAIYDALNIRKIDRKNLETTFS-EIGVKVLFIESI 202
Query: 126 VQDEEILEHNIKQSMCS 142
V D+EI+ NI ++ S
Sbjct: 203 VSDQEIMNRNIALALES 219
>sp|Q9URZ7|YK72_SCHPO Probable fructose-2,6-bisphosphatase C732.02c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC732.02c PE=3 SV=1
Length = 408
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 24/141 (17%)
Query: 7 LVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNTEG 66
L V VGLPA GKT A KLSRYLTW SVS + LY++ +I DN+
Sbjct: 10 LCVCFVGLPASGKTSSAMKLSRYLTW-------MSVSTH------LYDTKEI---DNSLS 53
Query: 67 YNIRQLSAREAQ------EDATKWLKNDGEVAIIDGTTATMEKRKQIHDYFARKMGFKVL 120
N S A+ ++ K +VAI+D T++ RK I + A+ ++
Sbjct: 54 ENSNSDSENLAKTLSPIFDNLESVFKKGTDVAILDFNQCTLKFRKSIVE-LAKARNMLLM 112
Query: 121 FVELIVQDEEILEHNIKQSMC 141
FVE++ +++I++ NI MC
Sbjct: 113 FVEVVCTNQKIIDENITD-MC 132
>sp|Q12471|6P22_YEAST 6-phosphofructo-2-kinase 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PFK27 PE=1 SV=1
Length = 397
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 18/116 (15%)
Query: 7 LVVALVGLPARGKTVLAHKLSRYLT----WTDHKSKVFSVSAYRR--------KHLELYN 54
++ L+GLPA GK+ ++ L + L + KVF+ RR K L L N
Sbjct: 97 FMIVLIGLPATGKSTISSHLIQCLKNNPLTNSLRCKVFNAGKIRRQISCATISKPLLLSN 156
Query: 55 --SHDIFRVDNTEGYNIRQLSAREAQEDATKWLKND-GEVAIIDGTTATMEKRKQI 107
S D+F N + ++ AR + + ND +V I D T +T+E+R+ I
Sbjct: 157 TSSEDLFNPKNNDK---KETYARITLQKLFHEINNDECDVGIFDATNSTIERRRFI 209
>sp|Q8PXF3|SRP54_METMA Signal recognition particle 54 kDa protein OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=srp54 PE=3 SV=1
Length = 443
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 3 QFTPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYR 46
Q P + +VGL GKT A KL+RY K+ V + +R
Sbjct: 94 QLKPQTIMMVGLQGSGKTTSAAKLARYFQRKGLKAGVVAADTFR 137
>sp|Q46E01|SRP54_METBF Signal recognition particle 54 kDa protein OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=srp54 PE=3 SV=1
Length = 443
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 3 QFTPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYR 46
Q P ++ +VGL GKT KL+RY K+ V + +R
Sbjct: 94 QLKPQIIMMVGLQGSGKTTSTAKLARYFQRKGLKAGVVAADTFR 137
>sp|Q66H65|N42L2_RAT NEDD4-binding protein 2-like 2 OS=Rattus norvegicus GN=N4bp2l2 PE=2
SV=1
Length = 574
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 23/101 (22%)
Query: 1 LRQFTPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFR 60
L + L++ L GLP GKT LSR L VFS Y ++ D +R
Sbjct: 388 LNKLQKLLILLRGLPGSGKTT----LSRILLGQSRDGIVFSTDDY-------FHHQDGYR 436
Query: 61 VDNTEGYNIRQLSAREAQEDATKWLKNDGEVAIIDGTTATM 101
YN+ QL DA W +N + AI G + +
Sbjct: 437 ------YNVNQLG------DAHDWNQNRAKQAIDQGRSPVI 465
>sp|Q92802|N42L2_HUMAN NEDD4-binding protein 2-like 2 OS=Homo sapiens GN=N4BP2L2 PE=1 SV=1
Length = 583
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 23/101 (22%)
Query: 1 LRQFTPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFR 60
L + L++ L GLP GKT LSR L + VFS Y ++ D +R
Sbjct: 397 LNKLQKLLILLRGLPGSGKTT----LSRILLGQNRDGIVFSTDDY-------FHHQDGYR 445
Query: 61 VDNTEGYNIRQLSAREAQEDATKWLKNDGEVAIIDGTTATM 101
YN+ QL DA W +N + AI G + +
Sbjct: 446 ------YNVNQLG------DAHDWNQNRAKQAIDQGRSPVI 474
>sp|Q56561|UREG_UREPA Urease accessory protein UreG OS=Ureaplasma parvum serovar 3
(strain ATCC 700970) GN=ureG PE=3 SV=1
Length = 206
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 33/77 (42%)
Query: 6 PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNTE 65
PL++ + G GKT+L +L+RYL+ + + Y ++ + + + D
Sbjct: 4 PLIIGVGGPVGAGKTMLIERLTRYLSTKGYSMAAITNDIYTKEDARILLNTSVLPADRIA 63
Query: 66 GYNIRQLSAREAQEDAT 82
G +EDA+
Sbjct: 64 GVETGGCPHTAIREDAS 80
>sp|Q8JZS6|N42L2_MOUSE NEDD4-binding protein 2-like 2 OS=Mus musculus GN=N4bp2l2 PE=2 SV=2
Length = 575
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 23/101 (22%)
Query: 1 LRQFTPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFR 60
L + L++ L GLP GKT LSR L VFS Y ++ D +R
Sbjct: 389 LNKLQKLLILLRGLPGSGKTT----LSRILLGQSRDGIVFSTDDY-------FHHQDGYR 437
Query: 61 VDNTEGYNIRQLSAREAQEDATKWLKNDGEVAIIDGTTATM 101
YN+ QL DA W +N + AI G + +
Sbjct: 438 ------YNVNQLG------DAHDWNQNRAKQAIDQGRSPVI 466
>sp|Q8THD0|SRP54_METAC Signal recognition particle 54 kDa protein OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=srp54 PE=3 SV=1
Length = 440
Score = 33.1 bits (74), Expect = 0.60, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 3 QFTPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYR 46
Q P + +VGL GKT A KL+RY K+ V + +R
Sbjct: 94 QLKPQTIMMVGLQGSGKTTSAAKLARYFQRKGLKAGVVAADTFR 137
>sp|Q66578|POLG_HPE1H Genome polyprotein OS=Human parechovirus 1 (strain Harris) PE=1 SV=1
Length = 2180
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 LRQFTPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFR 60
L + P+ + + G P +GK+ L H LSR L + + VF+ + + ++ Y++ DI
Sbjct: 1173 LIRIEPIGIWIQGEPGQGKSFLTHTLSRQLQKSCKLNGVFT-NPTASEFMDGYDNQDIHL 1231
Query: 61 VDN 63
+D+
Sbjct: 1232 IDD 1234
>sp|Q288N7|POLG_BECN1 Genome polyprotein OS=Bovine enteric calicivirus Newbury agent-1
(isolate Bovine/UK/Newbury1/1976) GN=ORF1 PE=3 SV=1
Length = 2210
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 8 VVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNTE 65
+V L G P GK+V AHKL++ L + S+ H + Y + D+ +D T
Sbjct: 451 IVVLCGPPGHGKSVAAHKLAKMLNPNEP-----SIWNPFSDHHDEYTAEDVVIIDETP 503
>sp|Q9YID8|POLG_HPE23 Genome polyprotein OS=Human parechovirus 2 (strain CT86-6760) PE=3
SV=1
Length = 2188
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 6 PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDN 63
P+ V + G P +GK+ L H LSR L + + V++ + + ++ Y++ DI +D+
Sbjct: 1186 PIGVWIQGEPGQGKSFLTHTLSRQLQKSCKLNGVYT-NPTASEFMDGYDNQDIHLIDD 1242
>sp|Q96725|POLG_EBHSG Genome polyprotein OS=European brown hare syndrome virus (strain
GD) GN=ORF1 PE=3 SV=1
Length = 2334
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 6 PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVD--N 63
P+ V G P GKT L H+L++ L H S + + H + Y D+ D N
Sbjct: 510 PVAVVFKGAPGIGKTYLVHRLAKDLG-CPHPSNI----NFGLDHFDSYTGEDVAIADEFN 564
Query: 64 TEG 66
T G
Sbjct: 565 TSG 567
>sp|Q7TU25|MIAA_PROMP tRNA dimethylallyltransferase OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=miaA PE=3 SV=1
Length = 299
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 3 QFTPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYR-------RKHLELYNS 55
Q PLV+ L+G A GKT L ++++Y H V S YR + E +
Sbjct: 3 QPKPLVIVLIGPTASGKTELGIEIAKYFNLNIH--NVDSRQLYRFMDIGTAKPTKEQQKT 60
Query: 56 HDIFRVDNTEGYNIRQLSAREAQEDATK 83
F +D E + Q++A++ QE ATK
Sbjct: 61 IKHFLIDLEEPSS--QVNAKQFQEIATK 86
>sp|A4YHL0|SRP54_METS5 Signal recognition particle 54 kDa protein OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=srp54 PE=3 SV=1
Length = 446
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 6 PLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLE 51
P V+ LVG+ GKT A KL+ + +K + YR LE
Sbjct: 96 PWVIMLVGVQGTGKTTTAGKLAYFYKKRGYKVALVGADVYRPAALE 141
>sp|Q92HM3|KCY_RICCN Cytidylate kinase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=cmk PE=3 SV=1
Length = 219
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Query: 14 LPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNTEGYNIRQLS 73
L A+GKT + ++ R + D + K RK L + D +D + +LS
Sbjct: 156 LQAKGKTCILDEILRQIILRDKRDK-------ERKAAPLLPASDALIIDTS------KLS 202
Query: 74 AREAQEDATKWLKN 87
A E E+ T ++KN
Sbjct: 203 AMEVVEEVTNYIKN 216
>sp|Q8TUY9|SRP54_METKA Signal recognition particle 54 kDa protein OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=srp54 PE=3 SV=1
Length = 447
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 8 VVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYR 46
V+ LVGL GKT A KL+RYL ++ + YR
Sbjct: 103 VIMLVGLYGMGKTTTAAKLARYLQRKGYRVGLVGADPYR 141
>sp|C4K1D2|KCY_RICPU Cytidylate kinase OS=Rickettsia peacockii (strain Rustic) GN=cmk
PE=3 SV=1
Length = 219
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Query: 14 LPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNTEGYNIRQLS 73
L A+GKT + ++ R + D + K RK L + D +D + +LS
Sbjct: 156 LQAKGKTCILDEILRQIILRDKRDK-------ERKAAPLLPASDALIIDTS------KLS 202
Query: 74 AREAQEDATKWLKN 87
A E E+ T ++KN
Sbjct: 203 AMEVVEEVTNYIKN 216
>sp|C3PNP6|KCY_RICAE Cytidylate kinase OS=Rickettsia africae (strain ESF-5) GN=cmk PE=3
SV=1
Length = 219
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Query: 14 LPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFRVDNTEGYNIRQLS 73
L A+GKT + ++ R + D + K RK L + D +D + +LS
Sbjct: 156 LQAKGKTCILDEILRQIILRDKRDK-------ERKAAPLLPASDALIIDTS------KLS 202
Query: 74 AREAQEDATKWLKN 87
A E E+ T ++KN
Sbjct: 203 AMEVVEEVTNYIKN 216
>sp|A2BNB5|SRP54_HYPBU Signal recognition particle 54 kDa protein OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=srp54 PE=3
SV=1
Length = 447
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 4 FTPLVVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYR 46
+TP V+ +VG+ GKT KL+++ ++ V + YR
Sbjct: 96 YTPYVIMMVGVQGSGKTTTVGKLAKFYRGMGYRVGVVAADTYR 138
>sp|Q8JN60|POLG_BECNB Genome polyprotein OS=Bovine enteric calicivirus NB (isolate
Bovine/United States/Nebraska/1980) GN=ORF1 PE=3 SV=1
Length = 2210
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 2 RQFTPL-VVALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYNSHDIFR 60
R+ TP ++ L G P GK+V AHKL++ L + S+ H + Y + ++
Sbjct: 444 RKRTPAKIIVLCGPPGHGKSVAAHKLAKMLNPNEP-----SIWNPFSDHHDEYTAEEVMV 498
Query: 61 VDNTE 65
+D T
Sbjct: 499 IDETP 503
>sp|P75054|SRP54_MYCPN Signal recognition particle protein OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=ffh PE=3 SV=1
Length = 450
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 6 PLVVALVGLPARGKTVLAHKLSRYLTWT-DHKSKVFSVSAYRRKHLELY-----NSHDIF 59
PL V +VGL GKT KL+ +L K+ + ++ YR ++ + +F
Sbjct: 99 PLKVMVVGLQGSGKTTTCGKLAVWLKKQFQQKAMLVALDIYRPAAIDQLATLAEQTESVF 158
Query: 60 RVDNTEGYNIRQLSAREAQEDATKWLKNDGEVAIIDGTTATMEKRKQIHDYF 111
T+ + + ++A K K G AII T ++ +++ D
Sbjct: 159 FAKGTQAPD-------QTTKEAVKTFKESGCQAIICDTAGRLQTNQELMDEL 203
>sp|Q47908|MSBA_FRANO Lipid A export ATP-binding/permease protein MsbA OS=Francisella
novicida GN=msbA PE=3 SV=2
Length = 593
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 9 VALVGLPARGKTVLAHKLSRYLTWTDHKSKVFSVSAYRRKHLELYN--------SHDIFR 60
VA VG GKT L +SR+ +T HK ++ + + L L N S ++
Sbjct: 379 VAFVGKSGSGKTTLTSIISRF--YTQHKGEIL-LDGVDTRELTLENLRSHLSIVSQNVHL 435
Query: 61 VDNTEGYNIRQLSAREAQED 80
D+T NI +RE ED
Sbjct: 436 FDDTVYNNIAFGLSREVSED 455
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,039,677
Number of Sequences: 539616
Number of extensions: 1949703
Number of successful extensions: 9165
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 9080
Number of HSP's gapped (non-prelim): 90
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)