Query psy2717
Match_columns 229
No_of_seqs 212 out of 1114
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 23:25:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2717.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2717hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qb0_A Actin-related protein 4 100.0 1.3E-62 4.3E-67 429.5 16.3 224 2-228 162-497 (498)
2 3dwl_A Actin-related protein 3 100.0 2E-62 7E-67 423.8 15.0 225 2-229 179-422 (427)
3 2fxu_A Alpha-actin-1, actin, a 100.0 1.2E-57 4.1E-62 389.7 21.9 228 2-229 148-375 (375)
4 1k8k_B ARP2, actin-like protei 100.0 1.7E-57 6E-62 390.8 16.8 225 2-226 152-388 (394)
5 4fo0_A Actin-related protein 8 100.0 3.5E-56 1.2E-60 401.0 14.7 228 2-229 246-590 (593)
6 1k8k_A ARP3, actin-like protei 100.0 3E-54 1E-58 373.5 17.9 227 3-229 164-413 (418)
7 4am6_A Actin-like protein ARP8 100.0 6.4E-46 2.2E-50 327.4 15.7 218 2-229 270-652 (655)
8 1jce_A ROD shape-determining p 99.9 3.2E-22 1.1E-26 168.5 8.9 175 2-207 147-330 (344)
9 1dkg_D Molecular chaperone DNA 99.6 1.5E-16 5.3E-21 135.5 4.5 173 3-203 189-381 (383)
10 3h1q_A Ethanolamine utilizatio 99.6 7.8E-16 2.7E-20 125.2 5.6 134 2-201 139-272 (272)
11 2v7y_A Chaperone protein DNAK; 99.5 1.8E-14 6E-19 127.3 6.6 167 3-203 162-350 (509)
12 3qfu_A 78 kDa glucose-regulate 99.4 2E-13 7E-18 116.5 3.7 167 4-203 208-392 (394)
13 2ych_A Competence protein PILM 99.3 8.2E-13 2.8E-17 112.2 5.2 138 4-172 193-331 (377)
14 3i33_A Heat shock-related 70 k 99.2 8E-12 2.7E-16 107.0 5.1 167 4-203 216-400 (404)
15 4a2a_A Cell division protein F 99.2 6.5E-11 2.2E-15 101.9 10.2 164 3-203 207-393 (419)
16 2kho_A Heat shock protein 70; 99.2 1.6E-11 5.6E-16 110.4 6.6 167 3-203 189-381 (605)
17 1yuw_A Heat shock cognate 71 k 99.2 1.2E-11 4.2E-16 110.1 5.3 167 3-202 194-378 (554)
18 3d2f_A Heat shock protein homo 99.1 1.2E-10 4E-15 105.9 8.2 165 3-202 198-381 (675)
19 4gni_A Putative heat shock pro 99.0 1.9E-10 6.7E-15 98.6 3.8 171 3-205 206-402 (409)
20 4apw_A ALP12; actin-like prote 98.8 4.1E-10 1.4E-14 94.0 0.9 47 3-49 173-219 (329)
21 2fsj_A Hypothetical protein TA 98.7 2.6E-09 8.9E-14 89.7 2.2 46 5-50 193-240 (346)
22 4b9q_A Chaperone protein DNAK; 98.7 2.3E-08 7.8E-13 89.9 8.1 165 4-202 190-380 (605)
23 2zgy_A Plasmid segregation pro 98.7 2E-08 7E-13 83.3 7.1 153 3-201 165-319 (320)
24 2d0o_A DIOL dehydratase-reacti 98.7 1.4E-08 4.9E-13 88.1 5.1 59 4-73 409-467 (610)
25 1nbw_A Glycerol dehydratase re 98.6 3.4E-08 1.2E-12 86.0 6.3 59 4-73 411-469 (607)
26 3js6_A Uncharacterized PARM pr 98.6 5.8E-09 2E-13 87.9 -0.2 48 3-50 185-232 (355)
27 4ehu_A Activator of 2-hydroxyi 97.0 0.00034 1.2E-08 56.4 3.2 51 144-202 203-253 (276)
28 2ews_A Pantothenate kinase; PA 96.8 0.02 6.7E-07 46.4 11.5 50 148-202 237-287 (287)
29 3cet_A Conserved archaeal prot 95.2 0.015 5.2E-07 47.8 3.9 24 3-26 128-151 (334)
30 1t6c_A Exopolyphosphatase; alp 93.9 0.079 2.7E-06 43.4 5.4 39 3-43 139-177 (315)
31 1hux_A Activator of (R)-2-hydr 93.4 0.024 8.1E-07 45.5 1.3 47 149-203 210-256 (270)
32 3cer_A Possible exopolyphospha 92.3 0.13 4.5E-06 42.6 4.4 41 3-43 147-191 (343)
33 3mdq_A Exopolyphosphatase; str 92.0 0.16 5.3E-06 41.7 4.4 39 3-43 132-170 (315)
34 2i7n_A Pantothenate kinase 1; 91.5 0.14 4.7E-06 42.7 3.6 73 127-201 284-358 (360)
35 1u6z_A Exopolyphosphatase; alp 91.2 0.29 1E-05 42.8 5.5 39 3-43 138-176 (513)
36 3hi0_A Putative exopolyphospha 90.0 0.41 1.4E-05 41.9 5.4 38 3-42 141-178 (508)
37 3aap_A Ectonucleoside triphosp 86.8 0.42 1.4E-05 39.7 3.2 35 3-37 141-177 (353)
38 4htl_A Beta-glucoside kinase; 73.4 2.7 9.3E-05 33.6 3.6 50 150-201 240-289 (297)
39 2aa4_A Mannac kinase, putative 71.8 1.7 5.9E-05 34.5 2.0 51 150-201 236-286 (289)
40 2gup_A ROK family protein; sug 69.1 1.7 5.7E-05 34.6 1.4 46 4-49 6-52 (292)
41 4db3_A Glcnac kinase, N-acetyl 68.1 4.3 0.00015 32.9 3.7 52 150-201 272-324 (327)
42 2hoe_A N-acetylglucosamine kin 66.5 5.3 0.00018 33.2 4.0 52 150-201 317-369 (380)
43 2qm1_A Glucokinase; alpha-beta 64.5 2.9 9.9E-05 33.7 2.0 52 150-201 265-319 (326)
44 2ivn_A O-sialoglycoprotein end 64.2 5.2 0.00018 32.6 3.5 35 148-187 245-279 (330)
45 3epq_A Putative fructokinase; 62.9 6.6 0.00023 31.5 3.8 52 150-201 227-287 (302)
46 3vov_A Glucokinase, hexokinase 62.5 4.1 0.00014 32.7 2.5 52 150-201 240-293 (302)
47 3r8e_A Hypothetical sugar kina 60.0 3.6 0.00012 33.3 1.7 52 150-201 263-317 (321)
48 3eno_A Putative O-sialoglycopr 59.0 8.1 0.00028 31.6 3.7 35 148-187 250-284 (334)
49 2itm_A Xylulose kinase, xylulo 56.6 8.6 0.00029 33.0 3.6 47 149-203 388-434 (484)
50 3vgl_A Glucokinase; ROK family 55.9 9.6 0.00033 30.7 3.7 48 1-48 1-49 (321)
51 3djc_A Type III pantothenate k 53.8 32 0.0011 27.1 6.2 48 4-51 4-52 (266)
52 3cj1_A Ectonucleoside triphosp 53.7 9.5 0.00033 32.7 3.4 21 3-23 191-211 (456)
53 3vgl_A Glucokinase; ROK family 53.4 27 0.00092 28.0 6.0 53 150-202 255-311 (321)
54 3htv_A D-allose kinase, alloki 50.6 18 0.00061 29.0 4.4 60 151-210 243-306 (310)
55 3qbx_A Anhydro-N-acetylmuramic 50.5 5.9 0.0002 33.0 1.5 23 149-171 285-307 (371)
56 2yhx_A Hexokinase B; transfera 49.3 18 0.00063 30.9 4.5 51 150-203 386-442 (457)
57 2ch5_A NAGK protein; transfera 46.2 18 0.00062 29.2 3.9 49 150-201 268-322 (347)
58 3cqy_A Anhydro-N-acetylmuramic 45.4 8.3 0.00028 32.1 1.6 22 150-171 292-313 (370)
59 2ap1_A Putative regulator prot 45.1 6.4 0.00022 31.8 0.9 45 4-48 26-72 (327)
60 2zf5_O Glycerol kinase; hypert 45.0 12 0.00043 32.1 2.8 47 148-203 394-440 (497)
61 2e2o_A Hexokinase; acetate and 44.5 9.3 0.00032 30.3 1.8 46 3-48 3-53 (299)
62 1saz_A Probable butyrate kinas 41.7 19 0.00064 29.9 3.3 49 150-202 298-347 (381)
63 2jsh_A Appetite-regulating hor 40.2 6.8 0.00023 19.1 0.2 14 209-222 9-22 (26)
64 2dpn_A Glycerol kinase; thermu 40.1 17 0.00057 31.3 2.8 46 149-203 400-445 (495)
65 3zx3_A Ectonucleoside triphosp 36.5 23 0.00078 30.3 3.0 21 3-23 182-202 (452)
66 2yhw_A Bifunctional UDP-N-acet 36.5 29 0.00099 28.0 3.6 27 4-30 32-59 (343)
67 1zbs_A Hypothetical protein PG 36.0 34 0.0012 26.9 3.9 44 5-48 3-50 (291)
68 1bdg_A Hexokinase; phosphotran 35.7 26 0.00088 29.9 3.3 50 151-203 396-446 (451)
69 3hz6_A Xylulokinase; xylulose, 35.4 21 0.00072 30.9 2.7 47 148-203 403-450 (511)
70 3h6e_A Carbohydrate kinase, FG 34.8 21 0.00071 30.8 2.6 47 149-204 389-436 (482)
71 3en9_A Glycoprotease, O-sialog 34.4 28 0.00095 30.3 3.4 35 148-187 249-283 (540)
72 1cza_N Hexokinase type I; stru 33.9 17 0.00059 34.1 2.0 51 149-203 408-459 (917)
73 2q2r_A Glucokinase 1, putative 33.4 12 0.00041 30.8 0.8 46 3-48 30-80 (373)
74 2e2o_A Hexokinase; acetate and 33.0 70 0.0024 25.0 5.3 44 150-201 242-285 (299)
75 4g9i_A Hydrogenase maturation 32.9 42 0.0014 30.8 4.3 27 148-174 706-732 (772)
76 3ll3_A Gluconate kinase; xylul 32.7 26 0.00089 30.2 2.9 46 149-203 395-440 (504)
77 2w40_A Glycerol kinase, putati 31.5 28 0.00094 30.0 2.8 46 149-203 409-454 (503)
78 4e1j_A Glycerol kinase; struct 31.2 29 0.00099 30.1 2.9 47 148-203 426-472 (520)
79 4ehu_A Activator of 2-hydroxyi 30.6 52 0.0018 25.5 4.1 45 7-51 6-51 (276)
80 2gup_A ROK family protein; sug 30.5 64 0.0022 25.1 4.7 52 150-201 230-285 (292)
81 4db3_A Glcnac kinase, N-acetyl 30.2 88 0.003 25.0 5.5 44 4-47 26-71 (327)
82 4f02_C Eukaryotic translation 30.0 21 0.00073 16.9 1.0 13 32-44 8-20 (27)
83 1uvq_C Orexin; immunology, MHC 30.0 14 0.00046 18.4 0.3 11 151-161 16-26 (33)
84 3i8b_A Xylulose kinase; strain 29.5 28 0.00097 30.1 2.6 46 149-203 426-471 (515)
85 2yhw_A Bifunctional UDP-N-acet 29.3 93 0.0032 24.9 5.6 49 150-201 287-336 (343)
86 3ifr_A Carbohydrate kinase, FG 29.1 26 0.00089 30.3 2.2 65 128-201 375-445 (508)
87 2d4w_A Glycerol kinase; alpha 28.4 30 0.001 29.8 2.5 46 149-203 405-450 (504)
88 2h3g_X Biosynthetic protein; p 27.9 1.5E+02 0.0051 23.1 6.3 47 5-51 3-51 (268)
89 1z05_A Transcriptional regulat 26.7 28 0.00097 29.2 2.0 66 128-201 345-413 (429)
90 1z6r_A MLC protein; transcript 26.4 42 0.0014 27.8 3.0 46 4-49 87-138 (406)
91 2aa4_A Mannac kinase, putative 26.1 1.1E+02 0.0037 23.7 5.3 45 5-49 4-51 (289)
92 2ap1_A Putative regulator prot 25.8 1.2E+02 0.004 24.1 5.5 52 150-201 272-324 (327)
93 4fo0_A Actin-related protein 8 25.2 21 0.00073 31.3 1.0 32 92-123 334-369 (593)
94 4bc3_A Xylulose kinase; transf 24.9 51 0.0017 28.6 3.4 46 149-203 436-481 (538)
95 1hux_A Activator of (R)-2-hydr 24.7 92 0.0031 24.2 4.6 22 4-25 98-119 (270)
96 3mcp_A Glucokinase; structural 24.5 1.8E+02 0.0062 23.8 6.5 47 3-49 10-61 (366)
97 2p3r_A Glycerol kinase; glycer 24.5 48 0.0016 28.6 3.1 46 149-203 403-448 (510)
98 3zx3_A Ectonucleoside triphosp 24.3 43 0.0015 28.6 2.7 16 4-19 36-51 (452)
99 3l0q_A Xylulose kinase; xlylul 24.2 34 0.0012 29.9 2.1 46 149-203 444-489 (554)
100 3vth_A Hydrogenase maturation 24.2 66 0.0023 29.5 4.0 48 149-201 695-745 (761)
101 3ezw_A Glycerol kinase; glycer 24.1 18 0.00063 31.4 0.3 61 148-217 403-471 (526)
102 2qm1_A Glucokinase; alpha-beta 23.3 90 0.0031 24.6 4.4 46 4-49 8-60 (326)
103 2hoe_A N-acetylglucosamine kin 22.9 1.4E+02 0.0048 24.3 5.5 29 4-32 89-118 (380)
104 3bex_A Type III pantothenate k 22.9 1.4E+02 0.0049 22.9 5.3 44 5-48 6-51 (249)
105 2ch5_A NAGK protein; transfera 22.7 1.6E+02 0.0054 23.4 5.8 26 3-28 7-33 (347)
106 3h3n_X Glycerol kinase; ATP-bi 22.6 59 0.002 27.9 3.3 46 149-203 405-450 (506)
107 3g25_A Glycerol kinase; IDP007 22.6 51 0.0017 28.3 2.8 65 128-201 382-449 (501)
108 2itm_A Xylulose kinase, xylulo 22.5 1.3E+02 0.0044 25.6 5.4 27 5-31 3-30 (484)
109 2zf5_O Glycerol kinase; hypert 21.8 1.4E+02 0.0048 25.4 5.5 29 4-32 5-34 (497)
110 4e1j_A Glycerol kinase; struct 21.7 1.3E+02 0.0046 25.8 5.4 29 4-32 28-57 (520)
111 4htl_A Beta-glucoside kinase; 21.7 1.6E+02 0.0054 23.0 5.5 47 3-49 5-53 (297)
112 3hm8_A Hexokinase-3; glucose, 20.8 72 0.0025 27.2 3.3 40 160-203 397-436 (445)
113 3f9m_A Glucokinase; hexokinase 20.6 67 0.0023 27.6 3.1 40 160-203 421-460 (470)
114 2d4w_A Glycerol kinase; alpha 20.5 1.6E+02 0.0054 25.2 5.6 30 4-33 4-34 (504)
115 2q2r_A Glucokinase 1, putative 20.3 1.5E+02 0.005 24.1 5.2 51 151-201 308-369 (373)
No 1
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-62 Score=429.47 Aligned_cols=224 Identities=33% Similarity=0.600 Sum_probs=200.9
Q ss_pred cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhc------------------CCCCCch------
Q psy2717 2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTER------------------GYSFTTT------ 57 (229)
Q Consensus 2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~------------------~~~~~~~------ 57 (229)
+||||||+|++.|+|+||++|++++++++++++||+++|++|+++|+++ +++++..
T Consensus 162 ~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~ 241 (498)
T 3qb0_A 162 PNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDY 241 (498)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHH
T ss_pred CeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHH
Confidence 6899999999999999999999999999999999999999999999864 3333321
Q ss_pred h-HHHHHHHHHHhccccccc--HHHHHHHhhcCCCCcceEeCCCCceeeecCc-cccccccccCCCCCCC----------
Q psy2717 58 A-EREIVRDIKEKLCYVALD--FEQEMATAAASTSLEKSYELPDGQVITIGNE-RFRCPEALFQPSFLGM---------- 123 (229)
Q Consensus 58 ~-~~~~~~~iK~~~~~v~~~--~~~~~~~~~~~~~~~~~~~lpdg~~i~~~~~-r~~~~E~lF~p~~~~~---------- 123 (229)
. +++++++|||++|||+.+ ++.+... ......+.|+||||+.|.++.| ||++||.||+|++++.
T Consensus 242 ~~~~~iv~~iKE~~c~Va~~~~~~~~~~~--~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~ 319 (498)
T 3qb0_A 242 ANNRGFFQECKETLCHICPTKTLEETKTE--LSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSG 319 (498)
T ss_dssp HHHHTHHHHHHHHTCCCCSSCHHHHHHHH--HHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSS
T ss_pred HHHHHHHHHHHHhhEEecCCccHhHHhhh--ccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCcccccccccc
Confidence 2 456899999999999986 5544322 1234578999999999999999 9999999999987643
Q ss_pred ----------------------------------------------------------------------CCCCHHHHHH
Q psy2717 124 ----------------------------------------------------------------------ESCGIHETVY 133 (229)
Q Consensus 124 ----------------------------------------------------------------------~~~~l~~~I~ 133 (229)
+..||+++|.
T Consensus 320 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~ 399 (498)
T 3qb0_A 320 VVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVY 399 (498)
T ss_dssp CCCCCSCCCCCCCBCC-----------------------------------------------------CCSCCHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHH
Confidence 5579999999
Q ss_pred HHHhcCCHHHHHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECC---CCCccceehhhhHhhccccccccc
Q psy2717 134 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGGSILASLSTFQQMW 210 (229)
Q Consensus 134 ~si~~~~~d~r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~---~~~~~~~w~Ggsila~l~~~~~~~ 210 (229)
+||.+||+|+|+.|++||+|+||+|++|||.+||++||+.+.| ..+++|.++ ++|.+++|+||||||+|++|+++|
T Consensus 400 ~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~w 478 (498)
T 3qb0_A 400 SSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLW 478 (498)
T ss_dssp HHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTS
T ss_pred HHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceE
Confidence 9999999999999999999999999999999999999999999 779999987 789999999999999999999999
Q ss_pred ccHHHHhhcCc-cchhhcc
Q psy2717 211 ISKQEYDESGP-GIVHRKC 228 (229)
Q Consensus 211 Itr~ey~e~G~-~~~~~k~ 228 (229)
|||+||+|+|+ ++++|||
T Consensus 479 itk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 479 VGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp EEHHHHHTTCCHHHHHHTT
T ss_pred EEHHHHhhhCcHhhccccC
Confidence 99999999999 9999998
No 2
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-62 Score=423.81 Aligned_cols=225 Identities=28% Similarity=0.516 Sum_probs=194.2
Q ss_pred cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHH
Q psy2717 2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 81 (229)
Q Consensus 2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~ 81 (229)
+||+|||+|+++|+|+||++|++++++++++++||+++|++|+++|+++++. ..+.+++++||+++|||+.|+.+++
T Consensus 179 ~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~IKe~~cyv~~d~~~e~ 255 (427)
T 3dwl_A 179 LTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAERIKEECCYVCPDIVKEF 255 (427)
T ss_dssp CCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHHHHHHHCCCCSCHHHHH
T ss_pred ceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHHHHHhcCcccCCHHHHH
Confidence 6899999999999999999999999999999999999999999999988754 4567899999999999999998887
Q ss_pred HHhhcCCCCcceEeC--CCCc--eeeecCccccccccccCCCCCCCC-CCCHHHHHHHHHhcCCHHHHHHhhcCeEEecC
Q psy2717 82 ATAAASTSLEKSYEL--PDGQ--VITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVLSGG 156 (229)
Q Consensus 82 ~~~~~~~~~~~~~~l--pdg~--~i~~~~~r~~~~E~lF~p~~~~~~-~~~l~~~I~~si~~~~~d~r~~l~~nIiltGG 156 (229)
+.....+...+.|++ |||+ .+.++.|||++||+||+|++++.+ ..+|+++|.++|.+||+|+|++|++||+||||
T Consensus 256 ~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG 335 (427)
T 3dwl_A 256 SRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGG 335 (427)
T ss_dssp HHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESG
T ss_pred HHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEcc
Confidence 654332223567888 8997 788999999999999999999988 48999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHHhhC--------------CCCCeEEEECCCCCccceehhhhHhhcccccccccccHHHHhhcCcc
Q psy2717 157 TTMYPGIADRMQKEITALA--------------PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPG 222 (229)
Q Consensus 157 ~s~i~Gl~~RL~~el~~~~--------------~~~~~v~v~~~~~~~~~~w~Ggsila~l~~~~~~~Itr~ey~e~G~~ 222 (229)
+|++|||.+||++||+.+. |..++++|.++++|.+++|+||||||++++|+++||||+||+|+|++
T Consensus 336 ~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f~~~witk~EYeE~G~~ 415 (427)
T 3dwl_A 336 STLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGAS 415 (427)
T ss_dssp GGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCGG
T ss_pred CcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccccchhheeEEHHHHhhhChH
Confidence 9999999999999999986 45678999999999999999999999999999999999999999999
Q ss_pred chhhccC
Q psy2717 223 IVHRKCF 229 (229)
Q Consensus 223 ~~~~k~~ 229 (229)
++|||++
T Consensus 416 iv~~~~~ 422 (427)
T 3dwl_A 416 IARRYQI 422 (427)
T ss_dssp GGSCCCC
T ss_pred hheeccc
Confidence 9999975
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=1.2e-57 Score=389.69 Aligned_cols=228 Identities=85% Similarity=1.298 Sum_probs=210.7
Q ss_pred cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHH
Q psy2717 2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 81 (229)
Q Consensus 2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~ 81 (229)
.||+|||+|+++|+|+||++|+++.++..++++||+++|++|.++|.++++++....+.+.+++||+++|+++.++.+++
T Consensus 148 ~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~ 227 (375)
T 2fxu_A 148 TTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEM 227 (375)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHH
T ss_pred CeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHH
Confidence 58999999999999999999999999999999999999999999999988877766778899999999999998888777
Q ss_pred HHhhcCCCCcceEeCCCCceeeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHHHhhcCeEEecCCCCcc
Q psy2717 82 ATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYP 161 (229)
Q Consensus 82 ~~~~~~~~~~~~~~lpdg~~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~~l~~nIiltGG~s~i~ 161 (229)
.+..........|++|||+.+.++.+||.+||.||+|.+++.+..+|+++|.++|.+||+|+|+++++||+||||+|++|
T Consensus 228 ~~~~~~~~~~~~~~lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~p 307 (375)
T 2fxu_A 228 ATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 307 (375)
T ss_dssp HHHHHCSTTCEEEECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCST
T ss_pred HhhcccCccCeEEECCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCc
Confidence 65544444568899999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcccccccccccHHHHhhcCccchhhccC
Q psy2717 162 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 229 (229)
Q Consensus 162 Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l~~~~~~~Itr~ey~e~G~~~~~~k~~ 229 (229)
||.+||++||..+.|...+++|..+++|.+++|+|||++|++++|+++||||+||+|+|++++|||||
T Consensus 308 G~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 308 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp THHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred cHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 99999999999999988889999999999999999999999999999999999999999999999997
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=1.7e-57 Score=390.84 Aligned_cols=225 Identities=44% Similarity=0.796 Sum_probs=164.4
Q ss_pred cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHH
Q psy2717 2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 81 (229)
Q Consensus 2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~ 81 (229)
+||+|||+|+++|+|+||++|+++.+++.++++||+++|++|.++|.++++++....+.+.+++||+++|+++.++..++
T Consensus 152 ~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~ 231 (394)
T 1k8k_B 152 LTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQ 231 (394)
T ss_dssp --CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHH
T ss_pred ceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHH
Confidence 58999999999999999999999999999999999999999999999988877766678899999999999998887776
Q ss_pred HHhhcCCCCcceEeCCCCceeeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHHHhhcCeEEecCCCCcc
Q psy2717 82 ATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYP 161 (229)
Q Consensus 82 ~~~~~~~~~~~~~~lpdg~~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~~l~~nIiltGG~s~i~ 161 (229)
+...........|++|||+.+.++.+||++||+||+|++++.+..+|+++|.++|.+||+|+|+++++||+||||+|++|
T Consensus 232 ~~~~~~~~~~~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~ 311 (394)
T 1k8k_B 232 KLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYP 311 (394)
T ss_dssp HHHHHCSTTCEEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCST
T ss_pred HhhccCCcCceEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccc
Confidence 54433344567899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhC-----------CCCCeEEEECCCCCccceehhhhHhhcccccc-cccccHHHHhhcCccchhh
Q psy2717 162 GIADRMQKEITALA-----------PSTIKIKIIAPPERKYSVWIGGSILASLSTFQ-QMWISKQEYDESGPGIVHR 226 (229)
Q Consensus 162 Gl~~RL~~el~~~~-----------~~~~~v~v~~~~~~~~~~w~Ggsila~l~~~~-~~~Itr~ey~e~G~~~~~~ 226 (229)
||.+||++||..+. |...+++|..+++|.+++|+|||++|++++|+ ++||||+||+|+|++++||
T Consensus 312 G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 312 GLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp THHHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred cHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 99999999999987 77778999999999999999999999999999 9999999999999999987
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-56 Score=400.95 Aligned_cols=228 Identities=21% Similarity=0.386 Sum_probs=169.8
Q ss_pred cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCC-----chhHHHHHHHHHHhccccccc
Q psy2717 2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT-----TTAEREIVRDIKEKLCYVALD 76 (229)
Q Consensus 2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~-----~~~~~~~~~~iK~~~~~v~~~ 76 (229)
+||||||||++.|+|+||+||++++++++++++||++||++|+++|.++++++. ...+++++++||+++||++.+
T Consensus 246 ~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d 325 (593)
T 4fo0_A 246 SSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQD 325 (593)
T ss_dssp SEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTT
T ss_pred CceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccc
Confidence 699999999999999999999999999999999999999999999999986554 356889999999999999765
Q ss_pred HHHH------------------------HHHh-----------------------------------------------h
Q psy2717 77 FEQE------------------------MATA-----------------------------------------------A 85 (229)
Q Consensus 77 ~~~~------------------------~~~~-----------------------------------------------~ 85 (229)
+..+ ...+ .
T Consensus 326 ~~~~~~~~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (593)
T 4fo0_A 326 ISGLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSA 405 (593)
T ss_dssp CCSCEEEEEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC--------------------------
T ss_pred hHHhhhhhhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhh
Confidence 3210 0000 0
Q ss_pred cCCCCcceEeCCCCceeeecCccccccccccCCCCC--------------------------------CCCCCCHHHHHH
Q psy2717 86 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL--------------------------------GMESCGIHETVY 133 (229)
Q Consensus 86 ~~~~~~~~~~lpdg~~i~~~~~r~~~~E~lF~p~~~--------------------------------~~~~~~l~~~I~ 133 (229)
........|++|+|..+.++.+|+.+||.||+|... +.+..||+++|.
T Consensus 406 ~~~~~~~~~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~ 485 (593)
T 4fo0_A 406 KATADRKSASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAIL 485 (593)
T ss_dssp -----------------------------------------------------------------CHHHHSCCCHHHHHH
T ss_pred hcccccccccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHH
Confidence 011223568899999999999999999999999642 113468999999
Q ss_pred HHHhcCC-HHHHHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCC-----CeEEEECCC---CCccceehhhhHhhccc
Q psy2717 134 NSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST-----IKIKIIAPP---ERKYSVWIGGSILASLS 204 (229)
Q Consensus 134 ~si~~~~-~d~r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~-----~~v~v~~~~---~~~~~~w~Ggsila~l~ 204 (229)
+||.+|+ .|+|++|++||+||||+|++|||.+||++||+.+.|.. .+++|++++ +|.+++|+||||||+|+
T Consensus 486 ~SI~~~~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~ 565 (593)
T 4fo0_A 486 HSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLD 565 (593)
T ss_dssp HHHHTCSSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCG
T ss_pred HHHHhCCcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCc
Confidence 9999998 59999999999999999999999999999999999864 258999886 89999999999999999
Q ss_pred ccccccccHHHHhhcCccchhhccC
Q psy2717 205 TFQQMWISKQEYDESGPGIVHRKCF 229 (229)
Q Consensus 205 ~~~~~~Itr~ey~e~G~~~~~~k~~ 229 (229)
+|+++||||+||+|+|+++|++||+
T Consensus 566 ~f~~~wItk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 566 TTQELWIYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp GGGGTCEEHHHHHHHTTHHHHHHCS
T ss_pred cHHHeeECHHHHHhhCcHHHhhcCC
Confidence 9999999999999999999999995
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=3e-54 Score=373.54 Aligned_cols=227 Identities=31% Similarity=0.561 Sum_probs=206.7
Q ss_pred ceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 82 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~ 82 (229)
||+|||+|+++|+|+||++|+++.+++.++++||+++|++|.++|.+++.++....+.+.++++|+++|+++.++.++++
T Consensus 164 ~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~ 243 (418)
T 1k8k_A 164 TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFN 243 (418)
T ss_dssp CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHHHH
T ss_pred eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHHHHH
Confidence 79999999999999999999999999999999999999999999999887776667789999999999999988877765
Q ss_pred Hhhc-CCCCcceEeCCCCc-----eeeecCccccccccccCCCCCCCCC-CCHHHHHHHHHhcCCHHHHHHhhcCeEEec
Q psy2717 83 TAAA-STSLEKSYELPDGQ-----VITIGNERFRCPEALFQPSFLGMES-CGIHETVYNSIMKCDVDIRKDLYANTVLSG 155 (229)
Q Consensus 83 ~~~~-~~~~~~~~~lpdg~-----~i~~~~~r~~~~E~lF~p~~~~~~~-~~l~~~I~~si~~~~~d~r~~l~~nIiltG 155 (229)
+... .......|++||+. .+.++.+||.+||.||+|.+.+.+. .+|+++|.++|.+||+|+|+++++||+|||
T Consensus 244 ~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~G 323 (418)
T 1k8k_A 244 KYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSG 323 (418)
T ss_dssp HHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEES
T ss_pred hhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeC
Confidence 4322 12234689999998 8999999999999999999888774 799999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHhhC----------------CCCCeEEEECCCCCccceehhhhHhhcccccccccccHHHHhhc
Q psy2717 156 GTTMYPGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 219 (229)
Q Consensus 156 G~s~i~Gl~~RL~~el~~~~----------------~~~~~v~v~~~~~~~~~~w~Ggsila~l~~~~~~~Itr~ey~e~ 219 (229)
|+|++|||.+||++||..+. |...+++|..+++|.+++|+||||+|++++|+++||||+||+|+
T Consensus 324 G~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey~e~ 403 (418)
T 1k8k_A 324 GSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEI 403 (418)
T ss_dssp GGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHHHHH
T ss_pred CccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHHhhh
Confidence 99999999999999999875 56678899999999999999999999999999999999999999
Q ss_pred CccchhhccC
Q psy2717 220 GPGIVHRKCF 229 (229)
Q Consensus 220 G~~~~~~k~~ 229 (229)
|++++||||+
T Consensus 404 G~~~~~~~~~ 413 (418)
T 1k8k_A 404 GPSICRHNPV 413 (418)
T ss_dssp CGGGGGCCCC
T ss_pred CHHHHhhhcc
Confidence 9999999773
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=6.4e-46 Score=327.41 Aligned_cols=218 Identities=21% Similarity=0.415 Sum_probs=181.5
Q ss_pred cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCC-----CCCchhHHHHHHHHHHhccccc-c
Q psy2717 2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGY-----SFTTTAEREIVRDIKEKLCYVA-L 75 (229)
Q Consensus 2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~-----~~~~~~~~~~~~~iK~~~~~v~-~ 75 (229)
+||||||+|++.|+|+||++|++++++++++++||+++|++|+++|.++++ ++++..+++++++|||++|||+ .
T Consensus 270 ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~ 349 (655)
T 4am6_A 270 TSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDA 349 (655)
T ss_dssp SCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGG
T ss_pred CceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEccc
Confidence 689999999999999999999999999999999999999999999999986 4677789999999999999994 4
Q ss_pred cHHHHHHHhhcCCCCcceE--eCCCC----ceeeecCccccccccccCCCCCCC--------------------------
Q psy2717 76 DFEQEMATAAASTSLEKSY--ELPDG----QVITIGNERFRCPEALFQPSFLGM-------------------------- 123 (229)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~--~lpdg----~~i~~~~~r~~~~E~lF~p~~~~~-------------------------- 123 (229)
|+. .....| ..|++ +.++++.|||+|||+||+|.+++.
T Consensus 350 Di~----------~q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~ 419 (655)
T 4am6_A 350 DVA----------VQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNEL 419 (655)
T ss_dssp GCC----------SEEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCB
T ss_pred chh----------hhhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCC
Confidence 431 012222 23554 468899999999999999964210
Q ss_pred -----------------------------------------------------CCCCHHHHHHHHHh-cC---CHHHHHH
Q psy2717 124 -----------------------------------------------------ESCGIHETVYNSIM-KC---DVDIRKD 146 (229)
Q Consensus 124 -----------------------------------------------------~~~~l~~~I~~si~-~~---~~d~r~~ 146 (229)
...+|.++|.+||. .| +....++
T Consensus 420 nd~~S~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~ 499 (655)
T 4am6_A 420 NDWNSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNS 499 (655)
T ss_dssp CSCCCHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHH
T ss_pred CCccchhHHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHH
Confidence 01489999999997 33 3334459
Q ss_pred hhcCeEEecCCCCccchHHHHHHHHHhhCCC-------------------------------------------------
Q psy2717 147 LYANTVLSGGTTMYPGIADRMQKEITALAPS------------------------------------------------- 177 (229)
Q Consensus 147 l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~------------------------------------------------- 177 (229)
+++||+++||+|+||||...|...|....|.
T Consensus 500 ~y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (655)
T 4am6_A 500 FYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIV 579 (655)
T ss_dssp HHTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHH
T ss_pred HhhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhh
Confidence 9999999999999999998888777653331
Q ss_pred ------------------CCeEEEECCCCC---ccceehhhhHhhcccccccccccHHHHhhcCccchhhccC
Q psy2717 178 ------------------TIKIKIIAPPER---KYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 229 (229)
Q Consensus 178 ------------------~~~v~v~~~~~~---~~~~w~Ggsila~l~~~~~~~Itr~ey~e~G~~~~~~k~~ 229 (229)
.++|+|.++|.+ .+++|+||||||+|++|+++||||+||+|.|++++++||+
T Consensus 580 ~~l~~~~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 580 EELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp HHHHHHHHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred hhhhhhhhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccc
Confidence 124789998865 8999999999999999999999999999999999999995
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.86 E-value=3.2e-22 Score=168.53 Aligned_cols=175 Identities=17% Similarity=0.264 Sum_probs=133.0
Q ss_pred cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHH
Q psy2717 2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 81 (229)
Q Consensus 2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~ 81 (229)
.+.+|||+|+++|+++++..|.++. ....++||+++|+.|.+++.++ +......+.+|++|+++++...+...+
T Consensus 147 ~~~lVvDiGggttdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~---~~~~~~~~~ae~~K~~l~~~~~~~~~~- 220 (344)
T 1jce_A 147 SGNMVVDIGGGTTEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRET---YRVAIGERTAERVKIEIGNVFPSKEND- 220 (344)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHH---HCEECCHHHHHHHHHHHCBCSCCHHHH-
T ss_pred ceEEEEEeCCCeEEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHH---hCcccCHHHHHHHHHHHhccCccccCC-
Confidence 3689999999999999999998874 3578999999999999999865 111123577999999999876543211
Q ss_pred HHhhcCCCCcceEe-----CCCCc--eeeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHHHhh-cCeEE
Q psy2717 82 ATAAASTSLEKSYE-----LPDGQ--VITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLY-ANTVL 153 (229)
Q Consensus 82 ~~~~~~~~~~~~~~-----lpdg~--~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~~l~-~nIil 153 (229)
...++ +.+|. .+.+..++|. .+|+|.. ..+.+.|.++|.+++++.+.+++ ++|+|
T Consensus 221 ---------~~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL 283 (344)
T 1jce_A 221 ---------ELETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFL 283 (344)
T ss_dssp ---------HCEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEE
T ss_pred ---------cceEEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEE
Confidence 11222 33664 4555555553 3555432 35888999999999999888888 79999
Q ss_pred ecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhc-ccccc
Q psy2717 154 SGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAS-LSTFQ 207 (229)
Q Consensus 154 tGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~-l~~~~ 207 (229)
+||+|++|||.++|++++. .++..+++|.+++|+|++++++ +++|+
T Consensus 284 ~GG~s~~p~l~~~l~~~~~--------~~v~~~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 284 TGGGSLLRGLDTLLQKETG--------ISVIRSEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp ESGGGCSBTHHHHHHHHHS--------SCEEECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred ECccccchHHHHHHHHHHC--------CCccccCChHHHHHHHHHHHHhChHHHH
Confidence 9999999999999999993 2345567889999999999998 46553
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.62 E-value=1.5e-16 Score=135.55 Aligned_cols=173 Identities=14% Similarity=0.109 Sum_probs=115.7
Q ss_pred ceeEEecCCCeeEEEEeeCC------eeccc-cceeecccHHHHHHHHHHHHHhc-----CCCCCch-----hHHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGNG------YALPH-AILRLDLAGRDLTDYLMKILTER-----GYSFTTT-----AEREIVRD 65 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G------~~~~~-~~~~~~~GG~~l~~~l~~ll~~~-----~~~~~~~-----~~~~~~~~ 65 (229)
+.+|+|+|+++|+++.+..+ ..... .....++||+++|+.|.+++.++ +.++... .-.+.+|+
T Consensus 189 ~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~ 268 (383)
T 1dkg_D 189 TIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEK 268 (383)
T ss_dssp EEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH
Confidence 57999999999999988643 32211 22346899999999999988764 3333221 12356788
Q ss_pred HHHhcccccccHHHHHHHhhcCCCCcceEeCCCC-c--eeeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHH
Q psy2717 66 IKEKLCYVALDFEQEMATAAASTSLEKSYELPDG-Q--VITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVD 142 (229)
Q Consensus 66 iK~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpdg-~--~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d 142 (229)
+|+.++..... .-.....++.++| . .+.+..+.|. .+|+|.. ..+.++|.++|.+++.
T Consensus 269 ~K~~ls~~~~~----------~i~i~~~~~~~~G~~~~~~~it~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~- 329 (383)
T 1dkg_D 269 AKIELSSAQQT----------DVNLPYITADATGPKHMNIKVTRAKLE---SLVEDLV-----NRSIELLKVALQDAGL- 329 (383)
T ss_dssp HHHHTTSSSEE----------EEEEEEEEEETTEEEEEEEEEEHHHHH---HHSHHHH-----HHHHHHHHHHHHTTTC-
T ss_pred HHHHhCCCCce----------EEEEecccccCCCCeeEEEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCC-
Confidence 88888764210 0000112334455 2 2345554442 3444421 2477888888888753
Q ss_pred HHHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 143 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 143 ~r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
.....++|+|+||+|++||+.++|++++. .++..+.+|..++|+||+++|++
T Consensus 330 -~~~~i~~IvL~GG~s~~p~l~~~l~~~~~--------~~v~~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 330 -SVSDIDDVILVGGQTRMPMVQKKVAEFFG--------KEPRKDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp -CTTTCCEEEEESGGGGSHHHHHHHHHHHS--------SCCBCSSCTTTHHHHHHHHHTTT
T ss_pred -CHhhCCEEEEecCccccHHHHHHHHHHhC--------CCCCCCcChHHHHHHHHHHHHHh
Confidence 33456899999999999999999999993 23556778899999999999875
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.59 E-value=7.8e-16 Score=125.24 Aligned_cols=134 Identities=13% Similarity=0.109 Sum_probs=101.8
Q ss_pred cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHH
Q psy2717 2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 81 (229)
Q Consensus 2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~ 81 (229)
.+++|||+|+++|+++++.+|.++.. ..+++||.++++.+.+.+.- +.+.++++|++++. ..++
T Consensus 139 ~~~~viDiGggst~~~~~~~g~~~~~--~~~~~Gg~~~~~~l~~~l~~---------~~~~ae~~k~~~~~-----~~~~ 202 (272)
T 3h1q_A 139 NDGIVVDIGGGTTGIAVIEKGKITAT--FDEPTGGTHLSLVLAGSYKI---------PFEEAETIKKDFSR-----HREI 202 (272)
T ss_dssp SSEEEEEECSSCEEEEEEETTEEEEE--CCBSCCHHHHHHHHHHHHTC---------CHHHHHHHHHSSTT-----HHHH
T ss_pred CCEEEEEECCCcEEEEEEECCEEEEE--ecCCCcHHHHHHHHHHHhCC---------CHHHHHHHHHhcCC-----HHHH
Confidence 35799999999999999999998843 67899999999999988752 24668888988651 1111
Q ss_pred HHhhcCCCCcceEeCCCCceeeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHHHhhcCeEEecCCCCcc
Q psy2717 82 ATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYP 161 (229)
Q Consensus 82 ~~~~~~~~~~~~~~lpdg~~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~~l~~nIiltGG~s~i~ 161 (229)
.. +.+.++ ..+.+.|.+++.+++ ..++|+|+||+|++|
T Consensus 203 ~~---------------------------~~~~~~---------~~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~ 240 (272)
T 3h1q_A 203 MR---------------------------VVRPVI---------EKMALIVKEVIKNYD------QTLPVYVVGGTAYLT 240 (272)
T ss_dssp HH---------------------------HHHHHH---------HHHHHHHHHHTTTSC------SSCCEEEESGGGGST
T ss_pred HH---------------------------HHHHHH---------HHHHHHHHHHHHhcC------CCCEEEEECCccchh
Confidence 10 011111 136778888888776 134899999999999
Q ss_pred chHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 162 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 162 Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
||.++|++++ ..++..+++|.+++|+|++++|
T Consensus 241 ~l~~~l~~~l--------~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 241 GFSEEFSRFL--------GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp THHHHHHHHH--------SSCCBCCSSGGGHHHHHHHTTC
T ss_pred hHHHHHHHHh--------CCCccccCChHHHHHHHHHhcC
Confidence 9999999999 3355567889999999999875
No 11
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.50 E-value=1.8e-14 Score=127.29 Aligned_cols=167 Identities=16% Similarity=0.222 Sum_probs=112.0
Q ss_pred ceeEEecCCCeeEEEEee--CCee-ccccceeecccHHHHHHHHHHHHHhc-----CCCCCch-----hHHHHHHHHHHh
Q psy2717 3 TRKLSTVSLHNKYSNPYG--NGYA-LPHAILRLDLAGRDLTDYLMKILTER-----GYSFTTT-----AEREIVRDIKEK 69 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~--~G~~-~~~~~~~~~~GG~~l~~~l~~ll~~~-----~~~~~~~-----~~~~~~~~iK~~ 69 (229)
+.+|+|+|+++|+++.+. +|.. +..+....++||+++++.|.++|.++ +.++... .-.+.+|.+|+.
T Consensus 162 ~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ 241 (509)
T 2v7y_A 162 TILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKE 241 (509)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHh
Confidence 579999999999999875 4643 32233446899999999999988654 3332211 123557778887
Q ss_pred cccccccHHHHHHHhhcCCCCcceEeC------CCC---ceeeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCC
Q psy2717 70 LCYVALDFEQEMATAAASTSLEKSYEL------PDG---QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD 140 (229)
Q Consensus 70 ~~~v~~~~~~~~~~~~~~~~~~~~~~l------pdg---~~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~ 140 (229)
++... ...+++ ++| ..+.+..+.| |.+|.|.. ..+.+.|.++|..++
T Consensus 242 ls~~~----------------~~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~-----~~i~~~i~~~L~~a~ 297 (509)
T 2v7y_A 242 LSGVT----------------QTQISLPFISANENGPLHLEMTLTRAKF---EELSAHLV-----ERTMGPVRQALQDAG 297 (509)
T ss_dssp TTTCS----------------EEEEEEEEEEEETTEEEEEEEEEEHHHH---HHHTHHHH-----HTTHHHHHHHHHHHT
T ss_pred cCCCC----------------cEEEEEeccccCCCCCeeEEEEEEHHHH---HHHHHHHH-----HHHHHHHHHHHHHcC
Confidence 76542 112222 233 2234444444 23444321 247788888888765
Q ss_pred HHHHHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 141 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 141 ~d~r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
. .....++|+|+||+|++|++.++|++++.. ++..+.+|..++|.||+++|..
T Consensus 298 ~--~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~~~~p~~aVa~Gaa~~a~~ 350 (509)
T 2v7y_A 298 L--TPADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHKGVNPDEVVAIGAAIQGGV 350 (509)
T ss_dssp C--CGGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred C--ChhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCcCCCchhhhHhhHHHHHHH
Confidence 3 334568999999999999999999999832 3445678899999999999863
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.36 E-value=2e-13 Score=116.46 Aligned_cols=167 Identities=18% Similarity=0.186 Sum_probs=102.5
Q ss_pred eeEEecCCCeeEEEEee--CCeecccc-ceeecccHHHHHHHHHHHHHhc-----CCCCCchh-----HHHHHHHHHHhc
Q psy2717 4 RKLSTVSLHNKYSNPYG--NGYALPHA-ILRLDLAGRDLTDYLMKILTER-----GYSFTTTA-----EREIVRDIKEKL 70 (229)
Q Consensus 4 glVVDiG~~~t~v~pV~--~G~~~~~~-~~~~~~GG~~l~~~l~~ll~~~-----~~~~~~~~-----~~~~~~~iK~~~ 70 (229)
-+|+|+|+++|+++.+. ++.....+ ....++||+++++.|.+++.++ +.+..... -.+.++.+|+.+
T Consensus 208 vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~l 287 (394)
T 3qfu_A 208 IIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRAL 287 (394)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHc
Confidence 48999999999887773 44332222 2337899999999999988542 11111100 012344444443
Q ss_pred ccccccHHHHHHHhhcCCCCcceEeC---CCCcee--eecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHH
Q psy2717 71 CYVALDFEQEMATAAASTSLEKSYEL---PDGQVI--TIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 145 (229)
Q Consensus 71 ~~v~~~~~~~~~~~~~~~~~~~~~~l---pdg~~i--~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~ 145 (229)
+.. ....+.+ .+|..+ .+..+.| |.++.|.. ..+.+.|.++|.+++.+ .
T Consensus 288 s~~----------------~~~~~~~~~~~~~~~~~~~i~r~~~---~~~~~~~~-----~~i~~~i~~~l~~~~~~--~ 341 (394)
T 3qfu_A 288 SSQ----------------MSTRIEIDSFVDGIDLSETLTRAKF---EELNLDLF-----KKTLKPVEKVLQDSGLE--K 341 (394)
T ss_dssp TTC----------------SEEEEEEEEEETTEEEEEEEEHHHH---HHHHHHHH-----HHTHHHHHHHHHHHTCC--G
T ss_pred ccC----------------CcEEEEEEeccCCceeEEEEEHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCCC--H
Confidence 321 1112222 133322 3333333 22333211 23667778888776543 3
Q ss_pred HhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 146 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 146 ~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
...++|+|+||+|++|++.++|++.+. ..++..+.+|..++|.||+++|.+
T Consensus 342 ~~i~~VvLvGG~s~~p~l~~~l~~~~~-------~~~v~~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 342 KDVDDIVLVGGSTRIPKVQQLLESYFD-------GKKASKGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp GGCCEEEEESGGGGSHHHHHHHHHHTT-------TCCCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHCCEEEEECCccccHHHHHHHHHHcC-------CCCCCCCcCHHHHHHHHHHHHHHh
Confidence 456889999999999999999999883 234556678899999999999864
No 13
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.33 E-value=8.2e-13 Score=112.21 Aligned_cols=138 Identities=13% Similarity=0.171 Sum_probs=83.9
Q ss_pred eeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHHHH
Q psy2717 4 RKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 83 (229)
Q Consensus 4 glVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~ 83 (229)
.+|||+|+++|+++.+.+|.++.. ..+++||+++++.+.+.+ + . +.+.+|++|+++++...+..++
T Consensus 193 ~~vvDiGggttdi~i~~~g~~~~~--~~~~~GG~~i~~~i~~~~---~--~----~~~~aE~~K~~~~~~~~~~~~~--- 258 (377)
T 2ych_A 193 FLVLDIGAESTSLVLLRGDKPLAV--RVLTLSGKDFTEAIARSF---N--L----DLLAAEEVKRTYGMATLPTEDE--- 258 (377)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEE--EEESCSHHHHHHHHHHHT---T--C----CHHHHHHHHHHTC------------
T ss_pred EEEEEECCCcEEEEEEECCEEEEE--EeeechHHHHHHHHHHHh---C--C----CHHHHHHHHhhccccccccccc---
Confidence 489999999999999999998753 668999999999988732 1 1 2467899999988764321111
Q ss_pred hhcCCCCcceEeCCCCceeeecCccc-cccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHHHhhcCeEEecCCCCccc
Q psy2717 84 AAASTSLEKSYELPDGQVITIGNERF-RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 162 (229)
Q Consensus 84 ~~~~~~~~~~~~lpdg~~i~~~~~r~-~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~~l~~nIiltGG~s~i~G 162 (229)
...+++|+ ..+.+..+.+ .+.+.++ ..+.+.|.+++..++...+....++|+|+||+|++||
T Consensus 259 -------~~~i~~~~-~~~~i~~~~~~~~i~~~~---------~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~ 321 (377)
T 2ych_A 259 -------ELLLDFDA-ERERYSPGRIYDAIRPVL---------VELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRG 321 (377)
T ss_dssp ------------------------CHHHHHHHHH---------HHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTT
T ss_pred -------cccccccc-ccccCCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchh
Confidence 11122332 2222222211 1111112 2366667777766555555667888999999999999
Q ss_pred hHHHHHHHHH
Q psy2717 163 IADRMQKEIT 172 (229)
Q Consensus 163 l~~RL~~el~ 172 (229)
|.++|.+++.
T Consensus 322 l~~~l~~~l~ 331 (377)
T 2ych_A 322 LASLLTDTLG 331 (377)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 9999999994
No 14
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.21 E-value=8e-12 Score=107.02 Aligned_cols=167 Identities=20% Similarity=0.230 Sum_probs=101.9
Q ss_pred eeEEecCCCeeEEEEee--CCee-ccccceeecccHHHHHHHHHHHHHhc-----CCCCCch-h----HHHHHHHHHHhc
Q psy2717 4 RKLSTVSLHNKYSNPYG--NGYA-LPHAILRLDLAGRDLTDYLMKILTER-----GYSFTTT-A----EREIVRDIKEKL 70 (229)
Q Consensus 4 glVVDiG~~~t~v~pV~--~G~~-~~~~~~~~~~GG~~l~~~l~~ll~~~-----~~~~~~~-~----~~~~~~~iK~~~ 70 (229)
-+|+|+|+++|+++.+. +|.. +.......++||+++++.|.+.+.++ +..+... . -.+.+|.+|+.+
T Consensus 216 vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~l 295 (404)
T 3i33_A 216 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTL 295 (404)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhC
Confidence 48999999999998773 4433 22223347899999999999888532 2222110 0 113345555554
Q ss_pred ccccccHHHHHHHhhcCCCCcceEeC---CCCce--eeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHH
Q psy2717 71 CYVALDFEQEMATAAASTSLEKSYEL---PDGQV--ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 145 (229)
Q Consensus 71 ~~v~~~~~~~~~~~~~~~~~~~~~~l---pdg~~--i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~ 145 (229)
+... ...+.+ .+|.. +.+..+.| |.++.|.. ..+.+.|.++|..+..+ .
T Consensus 296 s~~~----------------~~~~~~~~~~~g~~~~~~i~r~~~---~~~~~~~~-----~~i~~~i~~~l~~~~~~--~ 349 (404)
T 3i33_A 296 SSST----------------QASIEIDSLYEGVDFYTSITRARF---EELNADLF-----RGTLEPVEKALRDAKLD--K 349 (404)
T ss_dssp TTSS----------------EEEEEEEEEETTEEEEEEEEHHHH---HHHTHHHH-----HHTHHHHHHHHHHHTCC--G
T ss_pred CcCc----------------ceEEEEeeccCCceeEEEEcHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCCC--H
Confidence 3211 111222 23332 23333333 23333211 23566777777665332 2
Q ss_pred HhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 146 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 146 ~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
...+.|+|+||+|++|++.++|++.+.. .++..+.+|..+++.||+++|.+
T Consensus 350 ~~i~~VvLvGG~s~~p~l~~~l~~~~~~-------~~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 350 GQIQEIVLVGGSTRIPKIQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp GGCCEEEEESGGGGCHHHHHHHHHHTTT-------CCCBCSSCTTTHHHHHHHHHHHH
T ss_pred hhCCEEEEECCccccHHHHHHHHHHcCC-------CCCCCCcCHHHHHHHHHHHHHHH
Confidence 4457899999999999999999988732 24556678899999999999864
No 15
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.20 E-value=6.5e-11 Score=101.91 Aligned_cols=164 Identities=12% Similarity=0.096 Sum_probs=101.8
Q ss_pred ceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 82 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~ 82 (229)
..+|||+|+++|+++.+.+|.+... ..+++||+++|+.+.+.+.- ..+.+|.+|.+++....+.
T Consensus 207 gv~vvDiGggttdisi~~~g~~~~~--~~i~~GG~~it~dIa~~l~~---------~~~~AE~iK~~~g~a~~~~----- 270 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYKNGVPIKI--SYVPVGMKHVIKDVSAVLDT---------SFEESERLIITHGNAVYND----- 270 (419)
T ss_dssp CEEEEEECSSSEEEEEEETTEEEEE--EEESCCHHHHHHHHHHHHTC---------CHHHHHHHHHHHCCSCCTT-----
T ss_pred CEEEEEECCCcEEEEEEECCEEEEE--EecccHHHHHHHHHHHHHCC---------CHHHHHHHHHHhccCcccC-----
Confidence 4689999999999999999998864 56899999999999876532 2567999999887543211
Q ss_pred HhhcCCCCcceEeCC--CCc-eeeecCc-cccccccccCCCCCCCCCCCHHHHHHHHHhcCC---HHH-HHHhhcCeEEe
Q psy2717 83 TAAASTSLEKSYELP--DGQ-VITIGNE-RFRCPEALFQPSFLGMESCGIHETVYNSIMKCD---VDI-RKDLYANTVLS 154 (229)
Q Consensus 83 ~~~~~~~~~~~~~lp--dg~-~i~~~~~-r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~---~d~-r~~l~~nIilt 154 (229)
.....+++| +|. ...+... -..+.+..+ ..+.+.|.+.|.... ++. .....+.|+||
T Consensus 271 ------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~v---------eei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLt 335 (419)
T 4a2a_A 271 ------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARL---------REIMSKSKKFFREVEAKIVEEGEIGIPGGVVLT 335 (419)
T ss_dssp ------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHH---------HHHHHHHHHHHHHHTTCC--------TTCEEEE
T ss_pred ------CCCceEEEeecCCccceEEcHHHHHHHHHHHH---------HHHHHHHHHHHHHcCCCcccccccccCCEEEEE
Confidence 012233333 221 1222211 111112222 135566667776543 222 34567789999
Q ss_pred cCCCCccchHHHHHHHHHhhCCCCCeEEEEC-----C----------CCCccceehhhhHhhcc
Q psy2717 155 GGTTMYPGIADRMQKEITALAPSTIKIKIIA-----P----------PERKYSVWIGGSILASL 203 (229)
Q Consensus 155 GG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~-----~----------~~~~~~~w~Ggsila~l 203 (229)
||+|++||+.+.+++.+.. ++++.. | .+|.|++-+|-.+++.-
T Consensus 336 GG~s~lpgl~e~~~~~~g~------~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 336 GGGAKIPRINELATEVFKS------PVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp SGGGGSTTHHHHHHHHHTS------CEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC---
T ss_pred CchhchhhHHHHHHHHHCC------CeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhh
Confidence 9999999999999999842 344433 2 35778888887766643
No 16
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.20 E-value=1.6e-11 Score=110.37 Aligned_cols=167 Identities=15% Similarity=0.162 Sum_probs=106.0
Q ss_pred ceeEEecCCCeeEEEEee------CCee-ccccceeecccHHHHHHHHHHHHHhc-----CCCCCch-----hHHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYG------NGYA-LPHAILRLDLAGRDLTDYLMKILTER-----GYSFTTT-----AEREIVRD 65 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~------~G~~-~~~~~~~~~~GG~~l~~~l~~ll~~~-----~~~~~~~-----~~~~~~~~ 65 (229)
.-+|+|+|+++|+|+.+. +|.. +..+....++||+++++.|.+++.++ +.++... .-.+.+|.
T Consensus 189 ~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~ 268 (605)
T 2kho_A 189 TIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEK 268 (605)
T ss_dssp EEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHH
T ss_pred EEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH
Confidence 368999999999999885 3543 22222346899999999999888653 3222211 11245667
Q ss_pred HHHhcccccccHHHHHHHhhcCCCCcceEeC------CCC-c--eeeecCccccccccccCCCCCCCCCCCHHHHHHHHH
Q psy2717 66 IKEKLCYVALDFEQEMATAAASTSLEKSYEL------PDG-Q--VITIGNERFRCPEALFQPSFLGMESCGIHETVYNSI 136 (229)
Q Consensus 66 iK~~~~~v~~~~~~~~~~~~~~~~~~~~~~l------pdg-~--~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si 136 (229)
+|+.++... ...+.+ ++| . .+.+..+.| |-++.|-. ..+.+.|.++|
T Consensus 269 ~K~~ls~~~----------------~~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~-----~~i~~~i~~~L 324 (605)
T 2kho_A 269 AKIELSSAQ----------------QTDVNLPYITADATGPKHMNIKVTRAKL---ESLVEDLV-----NRSIEPLKVAL 324 (605)
T ss_dssp HHHHTTSSS----------------EEEEEEEEEEEETTEEEEEEEEEEHHHH---HTTCCSTT-----GGGTSHHHHHH
T ss_pred HHHHcCCCC----------------ceEEEecccccCCCCceEEEEEEeHHHH---HHHHHHHH-----HHHHHHHHHHH
Confidence 777665431 112222 223 1 123433333 33444431 24667778888
Q ss_pred hcCCHHHHHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 137 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 137 ~~~~~d~r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
..+.. ...-.+.|+|+||+|++|++.++|.+.+. ..+..+.+|..+++.||++.|..
T Consensus 325 ~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~fg--------~~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 325 QDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFG--------KEPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp HTTTC--CTTTCSEEEEESGGGGSHHHHHHHHHHHS--------SCCBCSSCTTTHHHHHHHHHHTT
T ss_pred HHcCC--ChhhCceEEEECCcccChHHHHHHHHhcC--------CCcCcCCCcchHHHHHHHHHHHH
Confidence 77642 22335789999999999999999999883 12345667889999999999864
No 17
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.19 E-value=1.2e-11 Score=110.12 Aligned_cols=167 Identities=18% Similarity=0.208 Sum_probs=103.0
Q ss_pred ceeEEecCCCeeEEEEee--CCee-ccccceeecccHHHHHHHHHHHHHhc-----CCCCCch-----hHHHHHHHHHHh
Q psy2717 3 TRKLSTVSLHNKYSNPYG--NGYA-LPHAILRLDLAGRDLTDYLMKILTER-----GYSFTTT-----AEREIVRDIKEK 69 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~--~G~~-~~~~~~~~~~GG~~l~~~l~~ll~~~-----~~~~~~~-----~~~~~~~~iK~~ 69 (229)
+.+|+|+|+++|+|+.+. +|.. +.......++||+++++.|.+++.++ +.++... .-.+.+|.+|+.
T Consensus 194 ~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ 273 (554)
T 1yuw_A 194 NVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 273 (554)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhh
Confidence 468999999999999886 6754 22233456899999999999888532 2222211 012445666766
Q ss_pred cccccccHHHHHHHhhcCCCCcceEeCC---CCce--eeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHH
Q psy2717 70 LCYVALDFEQEMATAAASTSLEKSYELP---DGQV--ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 144 (229)
Q Consensus 70 ~~~v~~~~~~~~~~~~~~~~~~~~~~lp---dg~~--i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r 144 (229)
++... ...+.++ +|.. +.+..+.| |.++.|-. ..+.+.|.++|..+.. .
T Consensus 274 ls~~~----------------~~~i~i~~~~~g~~~~~~ltr~~~---e~l~~~~~-----~~i~~~i~~~L~~a~~--~ 327 (554)
T 1yuw_A 274 LSSST----------------QASIEIDSLYEGIDFYTSITRARF---EELNADLF-----RGTLDPVEKALRDAKL--D 327 (554)
T ss_dssp HTTSS----------------EEEEEETTCSSSCCEEEEEEHHHH---HHHTHHHH-----HHTTHHHHHHHHHTTC--C
T ss_pred cccCc----------------eEEEEEeeccCCceEEEEEEHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC--C
Confidence 55321 1222222 3432 23333332 12332210 1244566666665422 1
Q ss_pred HHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhc
Q psy2717 145 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAS 202 (229)
Q Consensus 145 ~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~ 202 (229)
..-.+.|+|+||+|++|++.++|.+.+.. .++..+.+|..+++.||+++|.
T Consensus 328 ~~~i~~VvLvGG~srip~v~~~l~~~f~~-------~~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 328 KSQIHDIVLVGGSTRIPKIQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp GGGCCEEEEESGGGGCHHHHHHHHHHTTT-------CCCBCCSCTTTHHHHHHHHHHH
T ss_pred hhhCcEEEEECCcccChHHHHHHHHHcCC-------CccccCCCchhHHHHHHHHHHH
Confidence 23457899999999999999999988732 2344567788999999999885
No 18
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.11 E-value=1.2e-10 Score=105.92 Aligned_cols=165 Identities=10% Similarity=0.174 Sum_probs=102.3
Q ss_pred ceeEEecCCCeeEEEEee--CCee-ccccceeecccHHHHHHHHHHHHHhc-----CCCCCch-h----HHHHHHHHHHh
Q psy2717 3 TRKLSTVSLHNKYSNPYG--NGYA-LPHAILRLDLAGRDLTDYLMKILTER-----GYSFTTT-A----EREIVRDIKEK 69 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~--~G~~-~~~~~~~~~~GG~~l~~~l~~ll~~~-----~~~~~~~-~----~~~~~~~iK~~ 69 (229)
+-+|+|+|+++|+|+.+. +|.. +.......++||+++++.|.+++.++ +.++... . -.+.+|.+|+.
T Consensus 198 ~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~ 277 (675)
T 3d2f_A 198 IVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKV 277 (675)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 468999999999999885 6654 33223346899999999999988532 2221110 0 12445666665
Q ss_pred cccccccHHHHHHHhhcCCCCcceEeCC---CCc--eeeecCccc-cccccccCCCCCCCCCCCHHHHHHHHHhcCCHHH
Q psy2717 70 LCYVALDFEQEMATAAASTSLEKSYELP---DGQ--VITIGNERF-RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 143 (229)
Q Consensus 70 ~~~v~~~~~~~~~~~~~~~~~~~~~~lp---dg~--~i~~~~~r~-~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~ 143 (229)
++... ...+.++ +|. .+.+..+.| ...+.+|+ .+.+.|.++|..+...
T Consensus 278 Ls~~~----------------~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~---------~i~~~i~~~L~~a~l~- 331 (675)
T 3d2f_A 278 LSANT----------------NAPFSVESVMNDVDVSSQLSREELEELVKPLLE---------RVTEPVTKALAQAKLS- 331 (675)
T ss_dssp HHHCS----------------EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHT---------TTTHHHHHHHHHHTCC-
T ss_pred cCcCC----------------ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHhCCC-
Confidence 54211 1122222 222 233433333 12223332 3556677777654211
Q ss_pred HHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhc
Q psy2717 144 RKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAS 202 (229)
Q Consensus 144 r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~ 202 (229)
..-...|+|+||+|++|++.++|.+.+. ..+..+.+|..++..||++.|.
T Consensus 332 -~~~I~~VvLvGGssriP~v~~~l~~~fg--------~~~~~~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 332 -AEEVDFVEIIGGTTRIPTLKQSISEAFG--------KPLSTTLNQDEAIAKGAAFICA 381 (675)
T ss_dssp -GGGCCEEEEESGGGGSHHHHHHHHHHHT--------SCEECCSCTTTHHHHHHHHHHH
T ss_pred -hhhCcEEEEECCCccChHHHHHHHHhcC--------CCccccCCcchHHHHHHHHHHH
Confidence 1224689999999999999999999883 2345667888999999999885
No 19
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.98 E-value=1.9e-10 Score=98.60 Aligned_cols=171 Identities=18% Similarity=0.167 Sum_probs=99.5
Q ss_pred ceeEEecCCCeeEEEEe--eCCeecccc-ceeecccHHHHHHHHHHHHHhcC---CC--CCchhHH-------HHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPY--GNGYALPHA-ILRLDLAGRDLTDYLMKILTERG---YS--FTTTAER-------EIVRDIK 67 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV--~~G~~~~~~-~~~~~~GG~~l~~~l~~ll~~~~---~~--~~~~~~~-------~~~~~iK 67 (229)
.-+|+|+|+++|+++.+ .+|..-.-+ ....++||+++++.|.+++.++- +. .+..... ..+|.+|
T Consensus 206 ~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K 285 (409)
T 4gni_A 206 IIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTK 285 (409)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHH
Confidence 46899999999999886 344222111 12368999999999999886531 00 1111111 1344445
Q ss_pred HhcccccccHHHHHHHhhcCCCCcceEeC---CCCce--eeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHH
Q psy2717 68 EKLCYVALDFEQEMATAAASTSLEKSYEL---PDGQV--ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVD 142 (229)
Q Consensus 68 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~l---pdg~~--i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d 142 (229)
+.++.- ....+.+ .+|.. +.+..+.| |.++.|.. ..+.++|.+.|.+...
T Consensus 286 ~~ls~~----------------~~~~i~i~~~~~~~~~~~~itr~~~---~~~~~~~~-----~~i~~~i~~~l~~~~~- 340 (409)
T 4gni_A 286 RALSRS----------------TNASFSVESLIDGLDFASTINRLRY---ETIARTVF-----EGFNRLVESAVKKAGL- 340 (409)
T ss_dssp HHHHHS----------------SEEEEEEEEEETTEEEEEEEEHHHH---HHHTHHHH-----HHHHHHHHHHHHHTTC-
T ss_pred HhCCCC----------------CceEEEeecccCCcceEEEeeHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC-
Confidence 443211 1112222 13322 22332222 22333321 2356666777765532
Q ss_pred HHHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEE------ECCCCCccceehhhhHhhcccc
Q psy2717 143 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKI------IAPPERKYSVWIGGSILASLST 205 (229)
Q Consensus 143 ~r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v------~~~~~~~~~~w~Ggsila~l~~ 205 (229)
.....+.|+|+||+|.+|++.++|++.+.. .+++ ..+.+|..++-.||++.|....
T Consensus 341 -~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~ 402 (409)
T 4gni_A 341 -DPLDVDEVIMSGGTSNTPRIAANFRYIFPE------STRILAPSTDPSALNPSELQARGAALQASLIQ 402 (409)
T ss_dssp -CGGGCCEEEEESGGGGCHHHHHHHHHHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHHH
T ss_pred -CHHHCCEEEEECCccccHHHHHHHHHHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhhh
Confidence 223457899999999999999999988732 2345 2345788899999999997653
No 20
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.85 E-value=4.1e-10 Score=93.97 Aligned_cols=47 Identities=17% Similarity=0.026 Sum_probs=42.2
Q ss_pred ceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHh
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTE 49 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~ 49 (229)
+-+|||||+++|+++.+.+|.++......+++||+++++.+.+.|++
T Consensus 173 ~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 173 NVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred CEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 34899999999999999999998876778899999999999888776
No 21
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=98.74 E-value=2.6e-09 Score=89.71 Aligned_cols=46 Identities=9% Similarity=0.024 Sum_probs=39.9
Q ss_pred eEEecCCCeeEEEEee--CCeeccccceeecccHHHHHHHHHHHHHhc
Q psy2717 5 KLSTVSLHNKYSNPYG--NGYALPHAILRLDLAGRDLTDYLMKILTER 50 (229)
Q Consensus 5 lVVDiG~~~t~v~pV~--~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~ 50 (229)
+|||||+++|+|+.+. +|.++......+++||+++++.+.+.++++
T Consensus 193 lVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 193 VVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp EEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 8999999999999998 787776656788999999999998877654
No 22
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.72 E-value=2.3e-08 Score=89.93 Aligned_cols=165 Identities=16% Similarity=0.177 Sum_probs=92.6
Q ss_pred eeEEecCCCeeEEEEeeCCe------e-ccccceeecccHHHHHHHHHHHHHhc-----CCCCCchh-----HHHHHHHH
Q psy2717 4 RKLSTVSLHNKYSNPYGNGY------A-LPHAILRLDLAGRDLTDYLMKILTER-----GYSFTTTA-----EREIVRDI 66 (229)
Q Consensus 4 glVVDiG~~~t~v~pV~~G~------~-~~~~~~~~~~GG~~l~~~l~~ll~~~-----~~~~~~~~-----~~~~~~~i 66 (229)
-+|+|+|+++++|+.+.-+. . +..+....++||+++++.|.+.|.++ +.+..... -.+.+|.+
T Consensus 190 vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~ 269 (605)
T 4b9q_A 190 IAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKA 269 (605)
T ss_dssp EEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHH
Confidence 47999999999999885332 1 11122235789999999999888643 22211100 12334555
Q ss_pred HHhcccccccHHHHHHHhhcCCCCcceEeCC----C--C-c--eeeecCccccccccccCCCCCCCCCCCHHHHHHHHHh
Q psy2717 67 KEKLCYVALDFEQEMATAAASTSLEKSYELP----D--G-Q--VITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 137 (229)
Q Consensus 67 K~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp----d--g-~--~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~ 137 (229)
|+.++... ...+.+| + | . .+.+....| |-++.|-. ..+.+.|.+++.
T Consensus 270 K~~Ls~~~----------------~~~i~~~~~~~~~~g~~~~~~~itr~~~---e~l~~~~~-----~~i~~~v~~~L~ 325 (605)
T 4b9q_A 270 KIELSSAQ----------------QTDVNLPYITADATGPKHMNIKVTRAKL---ESLVEDLV-----NRSIEPLKVALQ 325 (605)
T ss_dssp HHHTTTCS----------------EEEEEEEEEEECSSSEEEEEEEEEHHHH---HHHHHHHH-----HHTTHHHHHHHH
T ss_pred HHhcCcCC----------------CeEEEEeeeccCCCCCeeEEEEEeHHHH---HHHHHHHH-----HHHHHHHHHHHH
Confidence 55544221 1111111 1 1 1 122222222 12222210 123444555555
Q ss_pred cCCHHHHHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhc
Q psy2717 138 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAS 202 (229)
Q Consensus 138 ~~~~d~r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~ 202 (229)
.... ...-.+.|+|+||+|++|++.++|.+.+.. .+..+.+|..++-.||++.|.
T Consensus 326 ~a~~--~~~~i~~VvLvGG~sriP~v~~~l~~~fg~--------~~~~~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 326 DAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp HTTC--CGGGCSEEEEESGGGGSHHHHHHHHHHHTS--------CCCSSSCTTTHHHHHHHHHHH
T ss_pred HcCC--CHHHCcEEEEeCCccCchHHHHHHHHHhcc--------CcCCCcChhHHHHHhHHHHHH
Confidence 4322 112246799999999999999999988832 234456777888899998885
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.72 E-value=2e-08 Score=83.28 Aligned_cols=153 Identities=11% Similarity=0.115 Sum_probs=87.4
Q ss_pred ceeEEecCCCeeEEEEeeCCee-ccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH-HHhcccccccHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYA-LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI-KEKLCYVALDFEQE 80 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~-~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~i-K~~~~~v~~~~~~~ 80 (229)
.-+|||||+++|+++.+.+|.+ +.......++||+++++.+.+.+.+++ .. ...+.++++ |.+... .+..+
T Consensus 165 ~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~--~~--i~~~~ae~~lk~~~~~---~~~~~ 237 (320)
T 2zgy_A 165 SLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR--TK--GSSYLADDIIIHRKDN---NYLKQ 237 (320)
T ss_dssp EEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCS--BG--GGHHHHHHHHHTTTCH---HHHHH
T ss_pred CEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcC--CC--CCHHHHHHHHHHhhhh---hcccc
Confidence 4589999999999999999886 443446679999999999999987652 21 223456666 544210 01000
Q ss_pred HHHhhcCCCCcceEeCCCCceeeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHHHhhcCeEEecCCCCc
Q psy2717 81 MATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMY 160 (229)
Q Consensus 81 ~~~~~~~~~~~~~~~lpdg~~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~~l~~nIiltGG~s~i 160 (229)
...+|.. +. ...+ .+.+. ...+.+.|.+.+.+. .-.+.|+|+||+|.+
T Consensus 238 ------------~i~~~~~--~~------~~~~-~i~~~-----~~~~~~~i~~~i~~~------~~~~~vvl~GGga~l 285 (320)
T 2zgy_A 238 ------------RINDENK--IS------IVTE-AMNEA-----LRKLEQRVLNTLNEF------SGYTHVMVIGGGAEL 285 (320)
T ss_dssp ------------HSSSSCT--HH------HHHH-HHHHH-----HHHHHHHHHHHHTTC------CCCCEEEEESTTHHH
T ss_pred ------------eecCchh--hH------HHHH-HHHHH-----HHHHHHHHHHHHHhh------cCCCeEEEECChHHH
Confidence 0001110 00 0000 01100 011333344444332 123679999999987
Q ss_pred cchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 161 PGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 161 ~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
+.+.|.+.+ +.. .-++..+++|.++.-+|+.+++
T Consensus 286 --l~~~l~~~~----~~~-~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 286 --ICDAVKKHT----QIR-DERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp --HHHHHHHTS----CCC-GGGEECCSCGGGHHHHHHHHHH
T ss_pred --HHHHHHHHh----CCC-CCceeeCCCcHHHHHHHHHHhc
Confidence 555555433 311 0035567889999999998876
No 24
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.68 E-value=1.4e-08 Score=88.09 Aligned_cols=59 Identities=14% Similarity=0.068 Sum_probs=49.6
Q ss_pred eeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccc
Q psy2717 4 RKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 73 (229)
Q Consensus 4 glVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v 73 (229)
.++||+|+++|+++.+.+|..+.. ..+++||+++|..+..-|.-. +.+.+|+||. ++.+
T Consensus 409 vaiIDmGGGTTd~sVf~~G~lv~a--~~ip~gG~~VT~DIA~~Lgt~--------d~~~AErIK~-YG~A 467 (610)
T 2d0o_A 409 LAILDLGAGSTDASIINPKGDIIA--THLAGAGDMVTMIIARELGLE--------DRYLAEEIKK-YPLA 467 (610)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEE--EEEECSHHHHHHHHHHHHTCC--------CHHHHHHHHH-SCEE
T ss_pred eEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhCCC--------CHHHHHHhcc-cCce
Confidence 479999999999999999999865 568999999999998877532 2577999998 7654
No 25
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.64 E-value=3.4e-08 Score=86.04 Aligned_cols=59 Identities=10% Similarity=0.036 Sum_probs=49.5
Q ss_pred eeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccc
Q psy2717 4 RKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 73 (229)
Q Consensus 4 glVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v 73 (229)
.++||+|+++|+++.+.+|..+.. ..+++||+++|..+..-|.-. +.+.+|+||. ++.+
T Consensus 411 vaiIDmGgGTTd~sVf~~g~lv~a--~~ip~gG~~VT~DIA~~Lg~~--------d~~~AErIK~-YG~A 469 (607)
T 1nbw_A 411 LAILDLGAGSTDAAIVNAEGQITA--VHLAGAGNMVSLLIKTELGLE--------DLSLAEAIKK-YPLA 469 (607)
T ss_dssp EEEEEECSSEEEEEEECSSSCEEE--EEEECCHHHHHHHHHHHHTCS--------CHHHHHHHHH-SCEE
T ss_pred eEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhCCC--------CHHHHHHhcc-cCce
Confidence 479999999999999999999865 568999999999998877532 2578999998 7654
No 26
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.58 E-value=5.8e-09 Score=87.88 Aligned_cols=48 Identities=6% Similarity=0.074 Sum_probs=42.3
Q ss_pred ceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhc
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTER 50 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~ 50 (229)
+-+|||||+++|+++.+.+|.++......+++||..+++.+.+.|+++
T Consensus 185 ~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 185 KYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred cEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 347999999999999999999998877889999999999999999875
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.02 E-value=0.00034 Score=56.36 Aligned_cols=51 Identities=29% Similarity=0.451 Sum_probs=42.6
Q ss_pred HHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhc
Q psy2717 144 RKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAS 202 (229)
Q Consensus 144 r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~ 202 (229)
+....+.|+++||.|..|++.++|++.+ ..+++.|++|.+.+-+||+++|.
T Consensus 203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~--------g~~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 203 RIGVQRNVVMVGGVARNSGIVRAMAREI--------NTEIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHCCCSSEEEESGGGGCHHHHHHHHHHH--------TSCEECCSSGGGHHHHHHHHHHH
T ss_pred hcccCCeEEEecCccchHHHHHHHHHHH--------CCCeeeCCCcchHHHHHHHHHHH
Confidence 3344567999999999999999999887 44677888898888899999983
No 28
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.76 E-value=0.02 Score=46.40 Aligned_cols=50 Identities=16% Similarity=0.023 Sum_probs=41.7
Q ss_pred hcCeEEecC-CCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhc
Q psy2717 148 YANTVLSGG-TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAS 202 (229)
Q Consensus 148 ~~nIiltGG-~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~ 202 (229)
.++|+++|| .+..|++.++|.+.+... ..+++.|+++++..-+||+++++
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~~ 287 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLEK 287 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTCC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhCC
Confidence 347999999 999999999999876543 55778888999999999998763
No 29
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=95.19 E-value=0.015 Score=47.80 Aligned_cols=24 Identities=13% Similarity=0.047 Sum_probs=22.7
Q ss_pred ceeEEecCCCeeEEEEeeCCeecc
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALP 26 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~ 26 (229)
.+++||||..+|+|+|+.+|.++.
T Consensus 128 ~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 128 NCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SEEEEEECSSCEEEEEEETTEECC
T ss_pred CEEEEEcCcchhhhhhhcCCeecc
Confidence 589999999999999999999986
No 30
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=93.92 E-value=0.079 Score=43.45 Aligned_cols=39 Identities=8% Similarity=-0.140 Sum_probs=34.0
Q ss_pred ceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYL 43 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l 43 (229)
+++|||||+++|.++-..+|.+.. ...+++|+-.+++.+
T Consensus 139 ~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 139 EVCVVDQGGGSTEYVFGKGYKVRE--VISLPIGIVNLTETF 177 (315)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEE--EEEECCCHHHHHHHH
T ss_pred CEEEEEeCCCcEEEEEEeCCceee--EEEEeccHHHHHHHh
Confidence 589999999999999998888753 467899999999876
No 31
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=93.39 E-value=0.024 Score=45.46 Aligned_cols=47 Identities=19% Similarity=0.426 Sum_probs=39.5
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|+++||.+.-+++.+.+.+.| ..+|..|+.+.+..-+|++++|..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~l--------g~~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGL--------GVEIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHH--------CSCEECCGGGGGHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHH--------CCCeEeCCCcchHhHHHHHHHHHH
Confidence 56999999999999999999998 345666777787788999999854
No 32
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=92.27 E-value=0.13 Score=42.63 Aligned_cols=41 Identities=5% Similarity=-0.010 Sum_probs=32.1
Q ss_pred ceeEEecCCCeeEEEEeeC--Ceec--cccceeecccHHHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGN--GYAL--PHAILRLDLAGRDLTDYL 43 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~--G~~~--~~~~~~~~~GG~~l~~~l 43 (229)
.++|||||+++|.++-+.+ +.+. ......+|+|+..+++.+
T Consensus 147 ~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 147 PYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERH 191 (343)
T ss_dssp SEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHT
T ss_pred CEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHh
Confidence 5899999999999998877 4331 113567899999999876
No 33
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=91.96 E-value=0.16 Score=41.65 Aligned_cols=39 Identities=10% Similarity=-0.050 Sum_probs=33.5
Q ss_pred ceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYL 43 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l 43 (229)
.++|+|||+++|.++-+.++.+.. ...+|+|.-.+++.+
T Consensus 132 ~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl~e~f 170 (315)
T 3mdq_A 132 ISLAMDIGGGSVEFIIGNKNEILW--KQSFEIGGQRLIDRF 170 (315)
T ss_dssp CEEEEEECSSCEEEEEECSSCEEE--EEEESCCHHHHHHHS
T ss_pred CEEEEEeCCCceEEEEEECCeEee--eEEEechhhHHHHHh
Confidence 579999999999999999887764 467899999888764
No 34
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=91.51 E-value=0.14 Score=42.73 Aligned_cols=73 Identities=11% Similarity=0.032 Sum_probs=48.8
Q ss_pred CHHHHHHHHHhcCCH-HHHHHhhcCeEEecC-CCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 127 GIHETVYNSIMKCDV-DIRKDLYANTVLSGG-TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 127 ~l~~~I~~si~~~~~-d~r~~l~~nIiltGG-~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
+|..+|.+.|.+... --++.=.++|+++|| .+.-|++.+.|.+.|..-... .++++.++++++..-+||++.+
T Consensus 284 gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 284 ATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 455555554433321 113333458999999 999999999999999643222 3455667778899999998764
No 35
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=91.15 E-value=0.29 Score=42.85 Aligned_cols=39 Identities=3% Similarity=-0.148 Sum_probs=33.3
Q ss_pred ceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYL 43 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l 43 (229)
.++|||||+++|.++-.-++.+.. ...+++|.-.+++.+
T Consensus 138 ~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGENFEPIL--VESRRMGCVSFAQLY 176 (513)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEE--EEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEeCCeeeE--EEEEeccHHHHHHHH
Confidence 589999999999999988888763 467899999998765
No 36
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=89.98 E-value=0.41 Score=41.86 Aligned_cols=38 Identities=11% Similarity=-0.063 Sum_probs=32.7
Q ss_pred ceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDY 42 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~ 42 (229)
.|+|||||+++|.++-+-+|.+.. ...+++|.-.+++.
T Consensus 141 ~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 141 DGIAGDLGGGSLELIDIKDKSCGE--GITLPLGGLRLSEQ 178 (508)
T ss_dssp EEEEEEECSSCEEEEEEETTEECC--CEEESCCHHHHHHH
T ss_pred CeEEEEeCCCceEEEEeeCCeeee--EEEecceEEehhhc
Confidence 579999999999999999998874 46789999888864
No 37
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=86.84 E-value=0.42 Score=39.73 Aligned_cols=35 Identities=9% Similarity=-0.064 Sum_probs=24.7
Q ss_pred ceeEEecCCCeeEEEEeeC--CeeccccceeecccHH
Q psy2717 3 TRKLSTVSLHNKYSNPYGN--GYALPHAILRLDLAGR 37 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~--G~~~~~~~~~~~~GG~ 37 (229)
|++|+|||+++|+++-... +.+.......+++||.
T Consensus 141 t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 141 SVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp CEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred cEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 6899999999999987744 3344333456677764
No 38
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=73.44 E-value=2.7 Score=33.64 Aligned_cols=50 Identities=12% Similarity=0.234 Sum_probs=36.3
Q ss_pred CeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+..+.|.+++++.+...... .+++..+.-...+.-+||+.++
T Consensus 240 ~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~ 289 (297)
T 4htl_A 240 HIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHF 289 (297)
T ss_dssp EEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHH
Confidence 3889999998888999999999765443 3345444444567788988776
No 39
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=71.83 E-value=1.7 Score=34.46 Aligned_cols=51 Identities=16% Similarity=0.291 Sum_probs=34.7
Q ss_pred CeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+..+-|.+++.+.+...... ..+++..+.....++.+||+.++
T Consensus 236 ~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 236 CVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp EEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 4888888887788889999888765321 23455444444556778988765
No 40
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=69.09 E-value=1.7 Score=34.64 Aligned_cols=46 Identities=15% Similarity=0.055 Sum_probs=32.3
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccceeecccHHHHHHHHHHHHHh
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAILRLDLAGRDLTDYLMKILTE 49 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~ 49 (229)
-+.||+|.+.+.++-+ .+|.++.......+.+-..+-+.+.+++.+
T Consensus 6 ~lgidiggt~i~~~l~d~~g~il~~~~~~~~~~~~~~~~~i~~~i~~ 52 (292)
T 2gup_A 6 IATIDIGGTGIKFASLTPDGKILDKTSISTPENLEDLLAWLDQRLSE 52 (292)
T ss_dssp EEEEEEETTEEEEEEECTTCCEEEEEEECCCSSHHHHHHHHHHHHTT
T ss_pred EEEEEECCCEEEEEEECCCCCEEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 5889999999999887 578777553332233556677777777764
No 41
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=68.15 E-value=4.3 Score=32.93 Aligned_cols=52 Identities=23% Similarity=0.222 Sum_probs=35.9
Q ss_pred CeEEecCCCCccchHHHHHHHHHhhCCC-CCeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEITALAPS-TIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el~~~~~~-~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+..+-|-+++.+.+...... ...+++..+.-...++-+||+.++
T Consensus 272 ~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 272 VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 3888888888777888888888776532 224555555544566778888765
No 42
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=66.48 E-value=5.3 Score=33.15 Aligned_cols=52 Identities=10% Similarity=0.115 Sum_probs=34.3
Q ss_pred CeEEecCCCCc-cchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMY-PGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i-~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+.. +-|.+++.+.+.........+++........++-+||+.++
T Consensus 317 ~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~ 369 (380)
T 2hoe_A 317 KIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHA 369 (380)
T ss_dssp EEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHH
T ss_pred EEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHH
Confidence 48888888754 67888888888776542223455544433456778988776
No 43
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=64.53 E-value=2.9 Score=33.69 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=34.3
Q ss_pred CeEEecCCCC-ccchHHHHHHHHHhhCCCC--CeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTM-YPGIADRMQKEITALAPST--IKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~-i~Gl~~RL~~el~~~~~~~--~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+. .+-|.+++.+.+....... ..+++..+.....++-+||+.++
T Consensus 265 ~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 319 (326)
T 2qm1_A 265 SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLA 319 (326)
T ss_dssp EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHG
T ss_pred EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHH
Confidence 4888888875 5778888888887764321 12345444444556778988776
No 44
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=64.19 E-value=5.2 Score=32.62 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=28.0
Q ss_pred hcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCC
Q psy2717 148 YANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 187 (229)
Q Consensus 148 ~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~ 187 (229)
.++|+++||.++=..+.++|.+.+... .++++.++
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~-----g~~v~~p~ 279 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDR-----GIKFFVPP 279 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHH-----TCEEECCC
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHc-----CCEEEecC
Confidence 357999999999999999999988643 24666655
No 45
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=62.93 E-value=6.6 Score=31.52 Aligned_cols=52 Identities=21% Similarity=0.259 Sum_probs=34.6
Q ss_pred CeEEecCCCCccchHHHHHHHHHhhCCCC---------CeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEITALAPST---------IKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el~~~~~~~---------~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+..+-|-+++++++.+..... .+..+..+.-...+.-+||+.++
T Consensus 227 ~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~ 287 (302)
T 3epq_A 227 XIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLA 287 (302)
T ss_dssp CEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHH
T ss_pred hhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHH
Confidence 48888888877668888888887654211 12335445444567788988776
No 46
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=62.54 E-value=4.1 Score=32.65 Aligned_cols=52 Identities=13% Similarity=0.088 Sum_probs=34.4
Q ss_pred CeEEecCCC-Cc-cchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTT-MY-PGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s-~i-~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+ .. +-|.+++++++..........++..+.-...++-+||+.++
T Consensus 240 ~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 293 (302)
T 3vov_A 240 VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTA 293 (302)
T ss_dssp EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHH
T ss_pred EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHH
Confidence 377888777 54 56889999999876543222234444444567778988776
No 47
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=60.04 E-value=3.6 Score=33.30 Aligned_cols=52 Identities=17% Similarity=0.166 Sum_probs=35.4
Q ss_pred CeEEecCCCCc-cchHHHHHHHHHhhCCCC--CeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMY-PGIADRMQKEITALAPST--IKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i-~Gl~~RL~~el~~~~~~~--~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+.. +-|.++|++.++...... ..+++..+.-...++-+||+.++
T Consensus 263 ~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 263 NILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred EEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 38888888765 667888888887765321 13455555555567788988775
No 48
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=58.97 E-value=8.1 Score=31.60 Aligned_cols=35 Identities=11% Similarity=0.208 Sum_probs=27.6
Q ss_pred hcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCC
Q psy2717 148 YANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 187 (229)
Q Consensus 148 ~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~ 187 (229)
.++|+++||.+.=..|.++|.+++... .++++.++
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~~-----g~~v~~p~ 284 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMAREA-----GIRSYLTD 284 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHHH-----TSEEECCC
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHHc-----CCEEEecC
Confidence 357999999999999999999998653 34566554
No 49
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=56.57 E-value=8.6 Score=33.03 Aligned_cols=47 Identities=13% Similarity=0.059 Sum_probs=32.3
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|.++||.|+=+-+.+.+.+-+ ..+|..++.....+-+|++++|..
T Consensus 388 ~~i~~~GG~a~s~~~~Qi~Adv~--------g~pV~~~~~~e~~~alGAA~lA~~ 434 (484)
T 2itm_A 388 QSVTLIGGGARSEYWRQMLADIS--------GQQLDYRTGGDVGPALGAARLAQI 434 (484)
T ss_dssp SCEEEESGGGCCHHHHHHHHHHH--------CCCEEEESCTTSCHHHHHHHHHHH
T ss_pred ceEEEEeccccCHHHHHHHHHHh--------CCeEEeCCCCCcccHHHHHHHHHH
Confidence 56999999999888877666655 334444444344456799888854
No 50
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=55.94 E-value=9.6 Score=30.69 Aligned_cols=48 Identities=8% Similarity=0.005 Sum_probs=33.0
Q ss_pred CcceeEEecCCCeeEEEEe-eCCeeccccceeecccHHHHHHHHHHHHH
Q psy2717 1 MATRKLSTVSLHNKYSNPY-GNGYALPHAILRLDLAGRDLTDYLMKILT 48 (229)
Q Consensus 1 ~~sglVVDiG~~~t~v~pV-~~G~~~~~~~~~~~~GG~~l~~~l~~ll~ 48 (229)
|.--+.||+|.+.+.++-+ .+|.++.......+.+.+.+-+.+.+.+.
T Consensus 1 M~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~~~~~~~~~~~i~~~i~ 49 (321)
T 3vgl_A 1 MGLTIGVDIGGTKIAAGVVDEEGRILSTFKVATPPTAEGIVDAICAAVA 49 (321)
T ss_dssp -CEEEEEEECSSEEEEEEECTTCCBCCCEEEECCSSHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCCEEEEEEECCCCCEEEEEEeeCCCCHHHHHHHHHHHHH
Confidence 3446889999999999888 56888766544445566666665555554
No 51
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=53.79 E-value=32 Score=27.10 Aligned_cols=48 Identities=13% Similarity=0.059 Sum_probs=34.7
Q ss_pred eeEEecCCCeeEEEEeeCCeeccccceeec-ccHHHHHHHHHHHHHhcC
Q psy2717 4 RKLSTVSLHNKYSNPYGNGYALPHAILRLD-LAGRDLTDYLMKILTERG 51 (229)
Q Consensus 4 glVVDiG~~~t~v~pV~~G~~~~~~~~~~~-~GG~~l~~~l~~ll~~~~ 51 (229)
=|+||||.+.+....+-++..+.......+ ...+.+...+.+++...+
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~ 52 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENN 52 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTT
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcC
Confidence 389999999999998888877654332222 456677777888887665
No 52
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=53.67 E-value=9.5 Score=32.72 Aligned_cols=21 Identities=5% Similarity=-0.285 Sum_probs=17.8
Q ss_pred ceeEEecCCCeeEEEEeeCCe
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGY 23 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~ 23 (229)
+..|+|+|+++|+|+-+-+..
T Consensus 191 t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 191 TLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCEEEEECSSEEEEEEECCSC
T ss_pred ceEEEEcCCCceEEEeccCCc
Confidence 578999999999999886654
No 53
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=53.37 E-value=27 Score=27.98 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=35.1
Q ss_pred CeEEecCCCCc-cchHHHHHHHHHhhCC-C--CCeEEEECCCCCccceehhhhHhhc
Q psy2717 150 NTVLSGGTTMY-PGIADRMQKEITALAP-S--TIKIKIIAPPERKYSVWIGGSILAS 202 (229)
Q Consensus 150 nIiltGG~s~i-~Gl~~RL~~el~~~~~-~--~~~v~v~~~~~~~~~~w~Ggsila~ 202 (229)
.|+|.||.+.. +-|.++|++.++.... . ...+++....-...+.-+||+.++.
T Consensus 255 ~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 255 AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 37888887765 4467888888887654 1 1245565555456677889877663
No 54
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=50.59 E-value=18 Score=29.02 Aligned_cols=60 Identities=18% Similarity=0.263 Sum_probs=36.9
Q ss_pred eEEecCCCCccc-hHHHHHHHHHhhCCC---CCeEEEECCCCCccceehhhhHhhccccccccc
Q psy2717 151 TVLSGGTTMYPG-IADRMQKEITALAPS---TIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 210 (229)
Q Consensus 151 IiltGG~s~i~G-l~~RL~~el~~~~~~---~~~v~v~~~~~~~~~~w~Ggsila~l~~~~~~~ 210 (229)
|+|.||.+..+. |.++|.+.+++.... ..++++..+.-...+.-+||+.++--..|.+-|
T Consensus 243 IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~p~ 306 (310)
T 3htv_A 243 VILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFC 306 (310)
T ss_dssp EEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC---
T ss_pred EEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhcccc
Confidence 788888887654 467787777765521 124566555544677889999887444444333
No 55
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=50.49 E-value=5.9 Score=33.02 Aligned_cols=23 Identities=13% Similarity=0.382 Sum_probs=20.7
Q ss_pred cCeEEecCCCCccchHHHHHHHH
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEI 171 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el 171 (229)
..|++|||++.=|-|.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 46999999999999999998776
No 56
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=49.30 E-value=18 Score=30.93 Aligned_cols=51 Identities=12% Similarity=0.142 Sum_probs=39.1
Q ss_pred CeEEecCCCCccchHHHHHHHHHhhCCC------CCeEEEECCCCCccceehhhhHhhcc
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEITALAPS------TIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el~~~~~~------~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
.|.+-||....|+|.+++++.++.+.+. ..+|.+....| .+=+||+++|.+
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~d---gsg~GAAl~aa~ 442 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAID---GXGAASXVIXSI 442 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCC---TTTHHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCC---chhhhHHHHHHH
Confidence 3777888877899999999999988643 33566665543 577899998865
No 57
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=46.23 E-value=18 Score=29.16 Aligned_cols=49 Identities=14% Similarity=0.169 Sum_probs=30.5
Q ss_pred CeEEecCCCC-ccchHHHHHHHHHhhC--CC---CCeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTM-YPGIADRMQKEITALA--PS---TIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~-i~Gl~~RL~~el~~~~--~~---~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+. .+-|.+++.+.++... +. ..++.+... .. ++-+||+.++
T Consensus 268 ~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~--~~-a~~~GAa~la 322 (347)
T 2ch5_A 268 PILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKL--RH-SSALGGASLG 322 (347)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEE--SS-CTHHHHHHHH
T ss_pred eEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEec--CC-ChHHHHHHHH
Confidence 5778888764 3677788888887764 21 123333222 24 6778988876
No 58
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=45.44 E-value=8.3 Score=32.12 Aligned_cols=22 Identities=14% Similarity=0.363 Sum_probs=20.2
Q ss_pred CeEEecCCCCccchHHHHHHHH
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEI 171 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el 171 (229)
.|++|||++.=|-|.+||++.|
T Consensus 292 ~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 292 ELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEESGGGGCHHHHHHHHHHC
T ss_pred EEEEECCCcCCHHHHHHHHHhC
Confidence 5999999999999999998776
No 59
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=45.15 E-value=6.4 Score=31.76 Aligned_cols=45 Identities=2% Similarity=-0.162 Sum_probs=28.7
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccceeec-ccHHHHHHHHHHHHH
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAILRLD-LAGRDLTDYLMKILT 48 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~~~~-~GG~~l~~~l~~ll~ 48 (229)
-+.||+|.+.+.++-+ .+|.++.......+ .+...+-+.+.+++.
T Consensus 26 ~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~~~~~~~~~~~i~~~i~ 72 (327)
T 2ap1_A 26 YYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVCELVE 72 (327)
T ss_dssp EEEEEECSSEEEEEEEETTCCEEEEEEEECCCSCHHHHHHHHHHHHH
T ss_pred EEEEEECCCEEEEEEEeCCCCEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 4789999999999888 46877754433322 244555555555543
No 60
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=45.02 E-value=12 Score=32.14 Aligned_cols=47 Identities=17% Similarity=0.154 Sum_probs=30.9
Q ss_pred hcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 148 YANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 148 ~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
.+.|.++||.|+=+-+.+.+.+-+. .+|.+.... . .+-+|++++|..
T Consensus 394 ~~~i~~~GG~a~s~~~~Qi~Adv~g------~pV~~~~~~--e-~~alGaA~lA~~ 440 (497)
T 2zf5_O 394 IKELRVDGGATANDFLMQFQADILN------RKVIRPVVK--E-TTALGAAYLAGL 440 (497)
T ss_dssp CCCEEEESGGGGCHHHHHHHHHHHT------SCEEEESCS--C-HHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHhhcC------CeEEEcCCC--c-chHHHHHHHHHH
Confidence 3569999999988777766655552 134433322 2 567799998854
No 61
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=44.45 E-value=9.3 Score=30.29 Aligned_cols=46 Identities=4% Similarity=-0.078 Sum_probs=28.5
Q ss_pred ceeEEecCCCeeEEEEe-eCCeeccccceeec----ccHHHHHHHHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPY-GNGYALPHAILRLD----LAGRDLTDYLMKILT 48 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV-~~G~~~~~~~~~~~----~GG~~l~~~l~~ll~ 48 (229)
--+.||+|.+.+.++-+ .+|.++.......+ .+.+.+-+.+.+.+.
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 53 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVK 53 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCCCHHHHCHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHH
Confidence 45789999999999888 56877755432222 233444444444443
No 62
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=41.69 E-value=19 Score=29.90 Aligned_cols=49 Identities=12% Similarity=0.202 Sum_probs=34.1
Q ss_pred CeEEecCCCCccc-hHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhc
Q psy2717 150 NTVLSGGTTMYPG-IADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAS 202 (229)
Q Consensus 150 nIiltGG~s~i~G-l~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~ 202 (229)
.|+|+||.+...- |.+++.+.+.... ++.+........+.-+||+.++.
T Consensus 298 ~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 298 FIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp EEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHT
T ss_pred EEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHc
Confidence 4999999887655 8888988887653 45555444434467788877664
No 63
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=40.21 E-value=6.8 Score=19.11 Aligned_cols=14 Identities=21% Similarity=0.496 Sum_probs=11.4
Q ss_pred ccccHHHHhhcCcc
Q psy2717 209 MWISKQEYDESGPG 222 (229)
Q Consensus 209 ~~Itr~ey~e~G~~ 222 (229)
.-+|-++|+|+|..
T Consensus 9 i~ls~~~y~~yG~~ 22 (26)
T 2jsh_A 9 IKLSGAQYQQHGRA 22 (26)
T ss_dssp GGGHHHHCSCSSSC
T ss_pred eEecHHHHHHHhHH
Confidence 45788999999964
No 64
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=40.13 E-value=17 Score=31.35 Aligned_cols=46 Identities=11% Similarity=0.161 Sum_probs=31.0
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|+++||.|+=+-+.+.+.+-+. .+|.+....+ .+-+|++++|..
T Consensus 400 ~~i~~~GG~a~n~~~~q~~Adv~g------~pV~~~~~~e---~~alGaA~la~~ 445 (495)
T 2dpn_A 400 KVLKADGGMAQNRLFLKIQADLLG------VPVAVPEVTE---TTALGAALMAGV 445 (495)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHHT------SCEEEESCSC---HHHHHHHHHHHH
T ss_pred cEEEEecccccCHHHHHHHHHHhC------CeeEecCCcc---cHHHHHHHHHHh
Confidence 469999999998888876666552 2444433332 566799888854
No 65
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=36.55 E-value=23 Score=30.34 Aligned_cols=21 Identities=5% Similarity=-0.331 Sum_probs=17.0
Q ss_pred ceeEEecCCCeeEEEEeeCCe
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGY 23 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~ 23 (229)
|..|+|+|+++|+|+-..++-
T Consensus 182 t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 182 TFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp CCEEEEECSSEEEEEECCSSC
T ss_pred ceEEEecCCCceEEEeccCCC
Confidence 566899999999998776553
No 66
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=36.51 E-value=29 Score=28.00 Aligned_cols=27 Identities=7% Similarity=-0.178 Sum_probs=21.1
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccce
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAIL 30 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~ 30 (229)
.+.||+|.+.+.++-+ .+|.++.....
T Consensus 32 ~lgiDiGgt~i~~~l~d~~G~il~~~~~ 59 (343)
T 2yhw_A 32 ALAVDLGGTNLRVAIVSMKGEIVKKYTQ 59 (343)
T ss_dssp EEEEEECSSEEEEEEEETTSCEEEEEEE
T ss_pred EEEEEECCCEEEEEEECCCCcEEEEEEE
Confidence 4789999999999888 57887765433
No 67
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=35.97 E-value=34 Score=26.93 Aligned_cols=44 Identities=7% Similarity=-0.042 Sum_probs=30.2
Q ss_pred eEEecCCCeeEEEEeeCCeeccccce-eec---ccHHHHHHHHHHHHH
Q psy2717 5 KLSTVSLHNKYSNPYGNGYALPHAIL-RLD---LAGRDLTDYLMKILT 48 (229)
Q Consensus 5 lVVDiG~~~t~v~pV~~G~~~~~~~~-~~~---~GG~~l~~~l~~ll~ 48 (229)
+-||+|+++|.+.-+-+|.++..... ..+ .+.+.+-+.+.+.+.
T Consensus 3 lgiDiGGT~~~~~l~d~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~ 50 (291)
T 1zbs_A 3 LIGDSGSTKTDWCIAKEGKSLGRFQTSGINPFQQDRNEIDTALRSEVL 50 (291)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEECCCTTTSCHHHHHHHHTTTTH
T ss_pred EEEEeCccceEEEEEeCCeEEEEEECCCCCcccCCHHHHHHHHHHHHH
Confidence 67999999999988778888765433 212 266666666655554
No 68
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=35.69 E-value=26 Score=29.93 Aligned_cols=50 Identities=16% Similarity=0.256 Sum_probs=34.8
Q ss_pred eEEecCCC-CccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 151 TVLSGGTT-MYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 151 IiltGG~s-~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
|.+.||.. .-|.|.+++++.++.+.....++.+... ...+.+||+++|..
T Consensus 396 V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~---~dgs~iGAAllA~~ 446 (451)
T 1bdg_A 396 VGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLS---EDGSGKGAAAIAAS 446 (451)
T ss_dssp EEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEEC---TTHHHHHHHHHHTT
T ss_pred EEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEEC---CCccHHHHHHHHHH
Confidence 44445543 4789999999999887543446665532 45788999998854
No 69
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=35.41 E-value=21 Score=30.89 Aligned_cols=47 Identities=13% Similarity=0.200 Sum_probs=32.4
Q ss_pred hcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEE-ECCCCCccceehhhhHhhcc
Q psy2717 148 YANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKI-IAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 148 ~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v-~~~~~~~~~~w~Ggsila~l 203 (229)
.+.|.++||.|+=+-+.+.+.+-+ .++| ..+. ..-.+-+|++++|..
T Consensus 403 ~~~i~~~GGga~s~~~~Qi~ADv~--------g~pV~~~~~-~~e~~alGaA~lA~~ 450 (511)
T 3hz6_A 403 VGLLKVVGGGARSEAWLRMIADNL--------NVSLLVKPD-AHLHPLRGLAALAAV 450 (511)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHH--------TCEEEECCC-GGGHHHHHHHHHHHH
T ss_pred CCEEEEeCchhcCHHHHHHHHHHH--------CCeeEEecC-CCCchHHHHHHHHHH
Confidence 566999999998777766555444 5566 5543 344566899998854
No 70
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=34.75 E-value=21 Score=30.75 Aligned_cols=47 Identities=9% Similarity=0.008 Sum_probs=28.7
Q ss_pred cCeEEecCCCCccchHHHHHHH-HHhhCCCCCeEEEECCCCCccceehhhhHhhccc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKE-ITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 204 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~e-l~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l~ 204 (229)
+.|.++||.|+=+-+.+.+.+- + . .+|.+.... . .+-+||+++|...
T Consensus 389 ~~i~~~GG~a~s~~w~Qi~ADv~~-g-----~pV~~~~~~--e-~~alGAA~lA~~a 436 (482)
T 3h6e_A 389 GRILVEGRFAEADVFVRALASLRP-D-----CAVYTANAH--N-DVSFGALRLIDPG 436 (482)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHST-T-----SEEEEESSC--C-CTTGGGHHHHCTT
T ss_pred CeEEEeCCcccCHHHHHHHhhhcC-C-----CeEEEcCCC--c-hHHHHHHHHhCcc
Confidence 5699999999755555444433 3 1 144443322 2 4558999998765
No 71
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=34.42 E-value=28 Score=30.31 Aligned_cols=35 Identities=14% Similarity=0.349 Sum_probs=27.9
Q ss_pred hcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCC
Q psy2717 148 YANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 187 (229)
Q Consensus 148 ~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~ 187 (229)
.++|+++||.+.=..|.++|.+.+... .++++.|+
T Consensus 249 ~~~~~~~GGVa~N~~l~~~l~~~~~~~-----~~~~~~p~ 283 (540)
T 3en9_A 249 KGEVMLVGGVAANNRLREMLKAMCEGQ-----NVDFYVPP 283 (540)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHT-----TCEEECCC
T ss_pred CCeEEEeCcHHhHHHHHHHHHHHHHhc-----CCEEEeCC
Confidence 457999999999999999999988654 35666654
No 72
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=33.87 E-value=17 Score=34.09 Aligned_cols=51 Identities=14% Similarity=0.316 Sum_probs=38.1
Q ss_pred cCeEEecCCCCc-cchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMY-PGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i-~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
..|++-||.+.. |.|.+++++.++.+.+. .++++... ..++-+||+++|.+
T Consensus 408 ~~IvigGgV~~~~~~~~~~l~~~l~~~~~~-~~~~i~~a---~dgs~~GAA~laa~ 459 (917)
T 1cza_N 408 TTVGVDGSLYKTHPQYSRRFHKTLRRLVPD-SDVRFLLS---ESGSGKGAAMVTAV 459 (917)
T ss_dssp EEEEEECHHHHHCSSHHHHHHHHHHHHCTT-EEEEEEEC---TTCHHHHHHHHHHH
T ss_pred eEEEECCchhhccHHHHHHHHHHHHHhcCC-CceEEEEe---ccchHHHHHHHHHh
Confidence 347777777665 99999999999988754 45666554 45678899888855
No 73
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=33.39 E-value=12 Score=30.84 Aligned_cols=46 Identities=7% Similarity=-0.082 Sum_probs=29.2
Q ss_pred ceeEEecCCCeeEEEEee-----CCeeccccceeecccHHHHHHHHHHHHH
Q psy2717 3 TRKLSTVSLHNKYSNPYG-----NGYALPHAILRLDLAGRDLTDYLMKILT 48 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~-----~G~~~~~~~~~~~~GG~~l~~~l~~ll~ 48 (229)
--+.||+|++.+.+.-+. +|.++.........+-..+-+.+.+++.
T Consensus 30 ~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~~~~~~~~~~~~~i~~~i~ 80 (373)
T 2q2r_A 30 LTFVGDVGGTSARMGFVREGKNDSVHACVTRYSMKRKDITEIIEFFNEIIE 80 (373)
T ss_dssp EEEEEEECSSEEEEEEEEECGGGCEEEEEEEEECTTCBGGGHHHHHHHHHH
T ss_pred eEEEEEEccccEEEEEEecccCCCccEEEEeeecCCCCHHHHHHHHHHHHH
Confidence 358899999999998884 6777654321111344555566666554
No 74
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=33.03 E-value=70 Score=25.02 Aligned_cols=44 Identities=25% Similarity=0.057 Sum_probs=28.1
Q ss_pred CeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+..+-|.++|.+.+... ++... . ....+-+||+.++
T Consensus 242 ~IvlgGgv~~~~~~~~~l~~~~~~~-----~i~~~--~-~~~~~~~GAa~la 285 (299)
T 2e2o_A 242 KVYLKGGMFRSNIYHKFFTLYLEKE-----GIISD--L-GKRSPEIGAVILA 285 (299)
T ss_dssp EEEEESGGGGSHHHHHHHHHHHHHT-----TCEEE--C-CSCCHHHHHHHHH
T ss_pred EEEEECCccCcHHHHHHHHHHCCCC-----eEecc--C-CCCChHHHHHHHH
Confidence 3788888765566777777776553 23332 2 3456778988877
No 75
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=32.85 E-value=42 Score=30.83 Aligned_cols=27 Identities=30% Similarity=0.335 Sum_probs=22.9
Q ss_pred hcCeEEecCCCCccchHHHHHHHHHhh
Q psy2717 148 YANTVLSGGTTMYPGIADRMQKEITAL 174 (229)
Q Consensus 148 ~~nIiltGG~s~i~Gl~~RL~~el~~~ 174 (229)
.+||+|+||.++=.-|.++|.+.+...
T Consensus 706 ~~~VvLSGGVa~N~~L~~~l~~~L~~~ 732 (772)
T 4g9i_A 706 VKNVALSGGVAYNELITKMIRKVVEAN 732 (772)
T ss_dssp CSCCCEESSTTCCHHHHHHHHHHGGGS
T ss_pred cCEEEEEchHHHHHHHHHHHHHHHHHC
Confidence 468999999999888889998888653
No 76
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=32.66 E-value=26 Score=30.22 Aligned_cols=46 Identities=13% Similarity=0.037 Sum_probs=29.6
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|.++||.|+=+-+.+.+.+-+. .+|.+.... -.+-+|++++|..
T Consensus 395 ~~i~~~GGga~s~~~~Qi~ADv~g------~pV~~~~~~---e~~alGaA~lA~~ 440 (504)
T 3ll3_A 395 VAINATGGFLKSDFVRQLCANIFN------VPIVTMKEQ---QSGTLAAMFLARQ 440 (504)
T ss_dssp SEEEEESGGGCSHHHHHHHHHHHT------SCEEEESCS---CHHHHHHHHHHHH
T ss_pred CEEEEeCchhcCHHHHHHHHHhhC------CeEEecCCC---CchhHHHHHHHHH
Confidence 569999999998877665554441 134333222 2556798888853
No 77
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=31.46 E-value=28 Score=30.01 Aligned_cols=46 Identities=24% Similarity=0.221 Sum_probs=30.8
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|.++||.|+=+-+.+.+.+-+. .+|.+....+ .+-+|++++|..
T Consensus 409 ~~i~~~GG~a~s~~~~Q~~Adv~g------~pV~~~~~~e---~~alGaA~la~~ 454 (503)
T 2w40_A 409 HVLRCDGGMTKNKPFMQFNSDIIN------TKIEVSKYKE---VTSLGAAVLAGL 454 (503)
T ss_dssp SCEEEESGGGGCHHHHHHHHHHHT------SCEEEESCSC---HHHHHHHHHHHH
T ss_pred ceEEEeCccccCHHHHHHHHHHHC------CeEEecCCCc---chHHHHHHHHHH
Confidence 669999999988877766665552 2444433332 566798888854
No 78
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=31.18 E-value=29 Score=30.10 Aligned_cols=47 Identities=13% Similarity=0.041 Sum_probs=30.2
Q ss_pred hcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 148 YANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 148 ~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
.+.|.++||.|+=+-+.+.+.+-+. .+|.+.... -.+-+|++++|..
T Consensus 426 ~~~i~~~GGgaks~~~~Qi~ADvlg------~pV~~~~~~---e~~alGAA~lA~~ 472 (520)
T 4e1j_A 426 DTVLRVDGGMVASDWTMQRLSDLLD------APVDRPVIL---ETTALGVAWLAGS 472 (520)
T ss_dssp -CCEEEESGGGGCHHHHHHHHHHHT------SCEEEESCC---CHHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHHHhC------CeEEecCCC---ccHHHHHHHHHHH
Confidence 4679999999987777775554441 134433333 2556799988854
No 79
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=30.56 E-value=52 Score=25.46 Aligned_cols=45 Identities=11% Similarity=0.079 Sum_probs=25.8
Q ss_pred EecCCCeeEEEEeeCCe-eccccceeecccHHHHHHHHHHHHHhcC
Q psy2717 7 STVSLHNKYSNPYGNGY-ALPHAILRLDLAGRDLTDYLMKILTERG 51 (229)
Q Consensus 7 VDiG~~~t~v~pV~~G~-~~~~~~~~~~~GG~~l~~~l~~ll~~~~ 51 (229)
||+|.++|.++.+-++. ++.+.+.+....=....+.+++++.+-+
T Consensus 6 ID~GsT~tk~av~d~~~~il~~~~~~~g~~~e~a~~vl~~~~~~a~ 51 (276)
T 4ehu_A 6 LDIGSTASKGVILKNGEDIVASETISSGTGTTGPSRVLEKLYGKTG 51 (276)
T ss_dssp EEECSSCEEEEEEETTTEEEEEEEESCCTTSSHHHHHHHHHHHHHC
T ss_pred EEcCccEEEEEEEECCCeEEEEEEecCCCCHHHHHHHHHHHHHHCC
Confidence 79999999998887654 4443333221111233445556555543
No 80
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=30.47 E-value=64 Score=25.14 Aligned_cols=52 Identities=13% Similarity=0.112 Sum_probs=33.0
Q ss_pred CeEEecCCCCccchHHHHHHHHHhhCCCC----CeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEITALAPST----IKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el~~~~~~~----~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+..+-|.+++.+.+....+.. ..+++..+.....++-+||+.++
T Consensus 230 ~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~ 285 (292)
T 2gup_A 230 VISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNW 285 (292)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHH
T ss_pred EEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHH
Confidence 48888888766778888888886643210 12344444333456778988776
No 81
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=30.25 E-value=88 Score=25.00 Aligned_cols=44 Identities=5% Similarity=-0.177 Sum_probs=28.6
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccceeecc-cHHHHHHHHHHHH
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAILRLDL-AGRDLTDYLMKIL 47 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~~~~~-GG~~l~~~l~~ll 47 (229)
-+.||+|.+.+.++-+ .+|.++.......+. +-+.+-+.+.+++
T Consensus 26 ~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~i~~~i 71 (327)
T 4db3_A 26 YYGFDVGGTKIEFGAFNEKLERVATERVPTPTDDYPLLLETIAGLV 71 (327)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEEECCCEEEEEEEeCCCcEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 4789999999999888 578877654433332 3444544444444
No 82
>4f02_C Eukaryotic translation initiation factor 4 gamma; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens}
Probab=30.02 E-value=21 Score=16.92 Aligned_cols=13 Identities=31% Similarity=0.647 Sum_probs=10.4
Q ss_pred ecccHHHHHHHHH
Q psy2717 32 LDLAGRDLTDYLM 44 (229)
Q Consensus 32 ~~~GG~~l~~~l~ 44 (229)
-+-||+++++.+.
T Consensus 8 pnqggkditeeim 20 (27)
T 4f02_C 8 PNQGGKDITEEIM 20 (27)
T ss_pred ccccchhhHHHHH
Confidence 4679999998764
No 83
>1uvq_C Orexin; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens}
Probab=29.98 E-value=14 Score=18.38 Aligned_cols=11 Identities=27% Similarity=0.782 Sum_probs=8.0
Q ss_pred eEEecCCCCcc
Q psy2717 151 TVLSGGTTMYP 161 (229)
Q Consensus 151 IiltGG~s~i~ 161 (229)
--++||+|++|
T Consensus 16 AaVtgggslvp 26 (33)
T 1uvq_C 16 AAVGGGGSLVP 26 (33)
T ss_pred EEecCCceeee
Confidence 35788888876
No 84
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=29.54 E-value=28 Score=30.14 Aligned_cols=46 Identities=20% Similarity=0.164 Sum_probs=30.1
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|+++||.|+=+-+.+.+.+-+. .+|.+.... -.+-+|++++|..
T Consensus 426 ~~i~~~GGgaks~~~~Qi~ADvlg------~pV~~~~~~---e~~alGAA~lA~~ 471 (515)
T 3i8b_A 426 TRILLIGGGAKSEAIRTLAPSILG------MDVTRPATD---EYVAIGAARQAAW 471 (515)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHT------SCEEEECCC---CHHHHHHHHHHHH
T ss_pred CEEEEECchhcCHHHHHHHHHHhC------CceEecCCc---ccHHHHHHHHHHH
Confidence 469999999987777766655552 144443333 2556899988853
No 85
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=29.32 E-value=93 Score=24.90 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=28.5
Q ss_pred CeEEecCCCCccchHHHHHHHHHhhCC-CCCeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el~~~~~-~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+ +-|.+.|.+.++.... ....+++..+... ..+-+||+.++
T Consensus 287 ~IvlgG~i~--~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~-~~~~~GAa~l~ 336 (343)
T 2yhw_A 287 LVILSGVLA--SHYIHIVKDVIRQQALSSVQDVDVVVSDLV-DPALLGAASMV 336 (343)
T ss_dssp EEEEESTTH--HHHHHHHHHHHHHHSCGGGTTCEEEECCCS-CHHHHHHHHHH
T ss_pred EEEEeCCcH--HHHHHHHHHHHHHhcccccCCcEEEEccCC-CchHHHHHHHH
Confidence 377777764 6677888887776532 1113344333222 24568888765
No 86
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=29.06 E-value=26 Score=30.26 Aligned_cols=65 Identities=11% Similarity=-0.004 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCHHHHHHh------hcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 128 IHETVYNSIMKCDVDIRKDL------YANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 128 l~~~I~~si~~~~~d~r~~l------~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
+..++.++|.-.-.+.-..| .+.|.++||.|+=+-+.+.+.+-+ ..+|..++... .+-+|++++|
T Consensus 375 l~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~--------g~pV~~~~~~e-~~alGaA~lA 445 (508)
T 3ifr_A 375 LWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVWMGIMADVL--------QRPVQLLANPL-GSAVGAAWVA 445 (508)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGGCHHHHHHHHHHH--------TSCEEEEECCS-THHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcccCHHHHHHHHHHh--------CCeEEecCCCC-chHHHHHHHH
No 87
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=28.40 E-value=30 Score=29.78 Aligned_cols=46 Identities=9% Similarity=0.122 Sum_probs=29.7
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|.++||.|+=+-+.+-+.+-+. .+|.+.... -.+-+|++++|..
T Consensus 405 ~~i~~~GG~a~s~~~~Qi~Adv~g------~pV~~~~~~---e~~alGaA~lA~~ 450 (504)
T 2d4w_A 405 TELRVDGGMVANELLMQFQADQLG------VDVVRPKVA---ETTALGAAYAAGI 450 (504)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHT------SCEEEESCS---CHHHHHHHHHHHH
T ss_pred ceEEEeCCcccCHHHHHHHHHHhC------CeEEeCCCC---cchHHHHHHHHHh
Confidence 569999999988777765555441 134433332 2466798888854
No 88
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=27.87 E-value=1.5e+02 Score=23.12 Aligned_cols=47 Identities=15% Similarity=0.142 Sum_probs=31.5
Q ss_pred eEEecCCCeeEEEEeeCCeeccccceeec--ccHHHHHHHHHHHHHhcC
Q psy2717 5 KLSTVSLHNKYSNPYGNGYALPHAILRLD--LAGRDLTDYLMKILTERG 51 (229)
Q Consensus 5 lVVDiG~~~t~v~pV~~G~~~~~~~~~~~--~GG~~l~~~l~~ll~~~~ 51 (229)
|+||||-+.+....+-++..+.......+ .-.+.+...+.+++...+
T Consensus 3 L~IDIGNT~ik~gl~~~~~l~~~~r~~T~~~~t~de~~~~l~~ll~~~~ 51 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEEGELRQHWRMETDRHKTEDEYGMLVKQLLEHEG 51 (268)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEECCTTCCHHHHHHHHHHHHHHTT
T ss_pred EEEEECcCcEEEEEEECCEEEEEEEecCCCcCCHHHHHHHHHHHHHHcC
Confidence 78999999999988877766644332222 224566667777777654
No 89
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=26.73 E-value=28 Score=29.16 Aligned_cols=66 Identities=11% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCHHHHHHhhcCeEEecCCCC-ccchHHHHHHHHHhhCCCCC--eEEEECCCCCccceehhhhHhh
Q psy2717 128 IHETVYNSIMKCDVDIRKDLYANTVLSGGTTM-YPGIADRMQKEITALAPSTI--KIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 128 l~~~I~~si~~~~~d~r~~l~~nIiltGG~s~-i~Gl~~RL~~el~~~~~~~~--~v~v~~~~~~~~~~w~Ggsila 201 (229)
|..+|...+...+++ .|+|.||.+. -+-|.+++.+++........ .+++..+.-... +.+||+.++
T Consensus 345 L~~~i~~l~~~ldP~-------~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~ 413 (429)
T 1z05_A 345 LGAAIAIVINLFNPE-------KILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALI 413 (429)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-------EEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHH
No 90
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=26.45 E-value=42 Score=27.82 Aligned_cols=46 Identities=7% Similarity=-0.078 Sum_probs=29.3
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccceeecc-c----HHHHHHHHHHHHHh
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAILRLDL-A----GRDLTDYLMKILTE 49 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~~~~~-G----G~~l~~~l~~ll~~ 49 (229)
.+.||+|.+.+.++-+ .+|.++.......+. + =+.+.+.+.+++.+
T Consensus 87 ~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 138 (406)
T 1z6r_A 87 YLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIR 138 (406)
T ss_dssp EEEEEEETTEEEEEEEETTCCEEEEEEEECCSSCSSCHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCEEEEEEEcCCCCEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4789999999999888 568777554333221 2 23455555666554
No 91
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=26.12 E-value=1.1e+02 Score=23.66 Aligned_cols=45 Identities=11% Similarity=0.020 Sum_probs=31.1
Q ss_pred eEEecCCCeeEEEEe-eCCeeccccceeecc--cHHHHHHHHHHHHHh
Q psy2717 5 KLSTVSLHNKYSNPY-GNGYALPHAILRLDL--AGRDLTDYLMKILTE 49 (229)
Q Consensus 5 lVVDiG~~~t~v~pV-~~G~~~~~~~~~~~~--GG~~l~~~l~~ll~~ 49 (229)
+.||+|.+.+.++-+ .+|.++.......+. +-+.+-+.+.+++.+
T Consensus 4 lgidiggt~~~~~l~d~~g~il~~~~~~~~~~~~~~~~~~~i~~~i~~ 51 (289)
T 2aa4_A 4 LAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSP 51 (289)
T ss_dssp EEEEECSSEEEEEEECTTCCEEEEEEEECCSSCCHHHHHHHHHHHHTT
T ss_pred EEEEeCCCEEEEEEECCCCCEEEEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 679999999999888 478877654333332 356666677776654
No 92
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=25.81 E-value=1.2e+02 Score=24.06 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=28.7
Q ss_pred CeEEecCCCCccchHHHHHHHHHhhCC-CCCeEEEECCCCCccceehhhhHhh
Q psy2717 150 NTVLSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 150 nIiltGG~s~i~Gl~~RL~~el~~~~~-~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
.|+|.||.+..+.+-..+.++++.... ....+++..+.-...++-+||+.++
T Consensus 272 ~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 272 LLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp EEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred EEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 377788877654443335555554432 1124455544433456778888765
No 93
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=25.22 E-value=21 Score=31.27 Aligned_cols=32 Identities=31% Similarity=0.676 Sum_probs=24.9
Q ss_pred ceEeCCCCce----eeecCccccccccccCCCCCCC
Q psy2717 92 KSYELPDGQV----ITIGNERFRCPEALFQPSFLGM 123 (229)
Q Consensus 92 ~~~~lpdg~~----i~~~~~r~~~~E~lF~p~~~~~ 123 (229)
..+.+|++.. +.+++|++.+||.+|+|..++.
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~ 369 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGI 369 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCC
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcc
Confidence 3456788764 5678999999999999987653
No 94
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=24.89 E-value=51 Score=28.63 Aligned_cols=46 Identities=13% Similarity=0.157 Sum_probs=28.7
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|.++||.|+=+-+.+.+.+-+ .+.|..+.. .-.+-+|++++|..
T Consensus 436 ~~i~~~GGga~s~~~~Qi~ADv~--------g~pV~~~~~-~e~~alGaA~lA~~ 481 (538)
T 4bc3_A 436 TKILATGGASHNREILQVLADVF--------DAPVYVIDT-ANSACVGSAYRAFH 481 (538)
T ss_dssp CCEEEEEGGGGCHHHHHHHHHHH--------TSCEEECCC-TTHHHHHHHHHHHH
T ss_pred CeEEEEcchhcCHHHHHHHHHHh--------CCceEecCC-CCchHHHHHHHHHH
Confidence 46999999998766666554444 333433332 22556788887754
No 95
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=24.73 E-value=92 Score=24.19 Aligned_cols=22 Identities=9% Similarity=-0.011 Sum_probs=19.6
Q ss_pred eeEEecCCCeeEEEEeeCCeec
Q psy2717 4 RKLSTVSLHNKYSNPYGNGYAL 25 (229)
Q Consensus 4 glVVDiG~~~t~v~pV~~G~~~ 25 (229)
.+|+|||++.|.++-+-+|.++
T Consensus 98 ~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 98 HTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp CEEEEEETTEEEEEEEETTEEE
T ss_pred CEEEEECCCceEEEEEeCCcee
Confidence 5799999999999999999765
No 96
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=24.55 E-value=1.8e+02 Score=23.80 Aligned_cols=47 Identities=9% Similarity=-0.034 Sum_probs=32.7
Q ss_pred ceeEEecCCCeeEEEEeeCCeecccc-ceeecc-cHHHHHHHHHH---HHHh
Q psy2717 3 TRKLSTVSLHNKYSNPYGNGYALPHA-ILRLDL-AGRDLTDYLMK---ILTE 49 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV~~G~~~~~~-~~~~~~-GG~~l~~~l~~---ll~~ 49 (229)
..+.||||.+.+.++-+-+|.++... ....+. +.+.+-+.+.+ ++.+
T Consensus 10 ~~lgiDIGgt~i~~~l~d~G~il~~~~~~~~~~~~~~~~l~~i~~~~~~i~~ 61 (366)
T 3mcp_A 10 IVMTLDAGGTNFVFSAIQGGKEIADPVVLPACADCLDKCLGNLVEGFKAIQA 61 (366)
T ss_dssp EEEEEECSSSEEEEEEEETTEECSCCEEEECCTTCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEECcceEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 35789999999999888888888765 333333 45566666666 5543
No 97
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=24.48 E-value=48 Score=28.59 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=29.1
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|.++||.|+=+-+.+.+.+-+. .+|.+.... -.+-+|++++|..
T Consensus 403 ~~i~~~GGga~s~~~~Qi~ADv~g------~pV~~~~~~---e~~alGaA~lA~~ 448 (510)
T 2p3r_A 403 HALRVDGGAVANNFLMQFQSDILG------TRVERPEVR---EVTALGAAYLAGL 448 (510)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHT------SEEEEESCC---CHHHHHHHHHHHH
T ss_pred cEEEEeCchhcCHHHHHHHHHHhC------CceEecCCC---CcHHHHHHHHHHH
Confidence 459999999988777775554441 134333323 2455788887753
No 98
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=24.26 E-value=43 Score=28.62 Aligned_cols=16 Identities=6% Similarity=-0.072 Sum_probs=14.3
Q ss_pred eeEEecCCCeeEEEEe
Q psy2717 4 RKLSTVSLHNKYSNPY 19 (229)
Q Consensus 4 glVVDiG~~~t~v~pV 19 (229)
|+|||+|.+.|++...
T Consensus 36 ~iviDaGSsgtRl~VY 51 (452)
T 3zx3_A 36 GIVLDAGSSHTNLYIY 51 (452)
T ss_dssp EEEEEECSSCEEEEEE
T ss_pred EEEEEcCCCCcEEEEE
Confidence 7999999999998765
No 99
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=24.25 E-value=34 Score=29.90 Aligned_cols=46 Identities=17% Similarity=0.360 Sum_probs=29.6
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|.++||.|+=+-+.+.+.+-+ ...|..+... -.+-+|++++|..
T Consensus 444 ~~i~~~GG~aks~~~~Qi~ADv~--------g~pV~~~~~~-e~~alGAA~lA~~ 489 (554)
T 3l0q_A 444 DTMMASGGGTKNPIFVQEHANAT--------GCAMLLPEES-EAMLLGSAMMGTV 489 (554)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHH--------CCEEEEESCS-CHHHHHHHHHHHH
T ss_pred CEEEEeCccccCHHHHHHHHHhh--------CCeEEecCCC-cchHHHHHHHHHH
Confidence 46999999998777666554444 3344433322 3566899998864
No 100
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=24.22 E-value=66 Score=29.48 Aligned_cols=48 Identities=17% Similarity=0.289 Sum_probs=32.5
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCC-CC--ccceehhhhHhh
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP-ER--KYSVWIGGSILA 201 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~-~~--~~~~w~Ggsila 201 (229)
+.|+|+||.+.=..|.++|.+.+... .++++.++ .+ ....=+|.+++|
T Consensus 695 ~~VvLsGGVa~N~~Lr~~L~~~l~~~-----g~~v~~p~~~p~~DgGialGQA~~a 745 (761)
T 3vth_A 695 NKVVLSGGSFQNRYLLRRLIEKLSLS-----GFEVYSNSKVPCNDGGISLGQAVIA 745 (761)
T ss_dssp CEEEEESGGGGSHHHHHHHHHHHHHT-----TCEEEECSSSCSSGGGHHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHHHHHhC-----CCEEEecCCCCCCchHHHHHHHHHH
Confidence 56999999999999999999998754 34555443 22 222235555544
No 101
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=24.09 E-value=18 Score=31.37 Aligned_cols=61 Identities=16% Similarity=0.254 Sum_probs=0.0
Q ss_pred hcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh--------cccccccccccHHHHh
Q psy2717 148 YANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA--------SLSTFQQMWISKQEYD 217 (229)
Q Consensus 148 ~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila--------~l~~~~~~~Itr~ey~ 217 (229)
.+.|.++||.|+=+=+.+-+.+-+ .++|..+.... ++-+|++++| ++....+.|...+.|+
T Consensus 403 ~~~i~v~GGgaks~~~~Qi~ADvl--------g~pV~~~~~~E-~~alGAA~lA~~a~G~~~~~~e~~~~~~~~~~~~ 471 (526)
T 3ezw_A 403 LHALRVDGGAVANNFLMQFQSDIL--------GTRVERPEVRE-VTALGAAYLAGLAVGFWQNLDELQEKAVIEREFR 471 (526)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHH--------TSEEEEESCCC-HHHHHHHHHHHHHTTSSSCGGGSTTCCCEEEEEC
T ss_pred CCEEEEECchhhCHHHHHHHHHHH--------CCEEEeCCCCc-hHHHHHHHHHHHHhCCCCCHHHHHHhcCCCeEEc
No 102
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=23.26 E-value=90 Score=24.62 Aligned_cols=46 Identities=4% Similarity=-0.051 Sum_probs=29.5
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccceeecc--cH----HHHHHHHHHHHHh
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAILRLDL--AG----RDLTDYLMKILTE 49 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~~~~~--GG----~~l~~~l~~ll~~ 49 (229)
-+.||+|.+.+.++-+ .+|.++.......+. +. +.+.+.+.+++.+
T Consensus 8 ~lgiDiggt~~~~~l~d~~g~il~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 60 (326)
T 2qm1_A 8 IIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDL 60 (326)
T ss_dssp EEEEEECSSEEEEEEEETTCCEEEEEEEECCCTTTTTTHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCEEEEEEECCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4789999999999888 567777554333332 22 3355555555554
No 103
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=22.88 E-value=1.4e+02 Score=24.35 Aligned_cols=29 Identities=14% Similarity=-0.089 Sum_probs=21.9
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccceee
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAILRL 32 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~~~ 32 (229)
.+.||+|.+.+.++-+ .+|.++.......
T Consensus 89 ~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~ 118 (380)
T 2hoe_A 89 VLGIEVTRDEIAACLIDASMNILAHEAHPL 118 (380)
T ss_dssp EEEEEECSSEEEEEEEETTCCEEEEEEEEC
T ss_pred EEEEEECCCEEEEEEECCCCCEEEEEEEcc
Confidence 4789999999999888 5788876544333
No 104
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=22.85 E-value=1.4e+02 Score=22.91 Aligned_cols=44 Identities=16% Similarity=0.067 Sum_probs=27.5
Q ss_pred eEEecCCCeeEEEEeeCCeeccccceeec--ccHHHHHHHHHHHHH
Q psy2717 5 KLSTVSLHNKYSNPYGNGYALPHAILRLD--LAGRDLTDYLMKILT 48 (229)
Q Consensus 5 lVVDiG~~~t~v~pV~~G~~~~~~~~~~~--~GG~~l~~~l~~ll~ 48 (229)
|+||||.+.+...-+.++..+.......+ ...+.+-..+.+++.
T Consensus 6 L~IDIGNT~ik~gl~~~~~l~~~~r~~T~~~~t~de~~~~l~~l~~ 51 (249)
T 3bex_A 6 LLVDVGNTHSVFSITEDGKTFRRWRLSTGVFQTEDELFSHLHPLLG 51 (249)
T ss_dssp EEEEECSSEEEEEEESSSSSCEEEEEECCTTCCHHHHHHHHHHHHG
T ss_pred EEEEECCCeEEEEEEECCEEEEEEEecCCCCCCHHHHHHHHHHHHh
Confidence 78999999999877766655443222222 224555666666664
No 105
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=22.67 E-value=1.6e+02 Score=23.40 Aligned_cols=26 Identities=12% Similarity=-0.178 Sum_probs=20.8
Q ss_pred ceeEEecCCCeeEEEEe-eCCeecccc
Q psy2717 3 TRKLSTVSLHNKYSNPY-GNGYALPHA 28 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV-~~G~~~~~~ 28 (229)
--+.||+|.+.+.++-+ .+|.++...
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~i~~~~ 33 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGKILAEA 33 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSCEEEEE
T ss_pred EEEEEEcCccceEEEEEeCCCCEEEEE
Confidence 36789999999999888 478777554
No 106
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=22.63 E-value=59 Score=27.95 Aligned_cols=46 Identities=15% Similarity=0.173 Sum_probs=29.8
Q ss_pred cCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 149 ANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 149 ~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
+.|.++||.|+=+-+.+.+.+-+ ..+|..+.. .-.+-+|++++|..
T Consensus 405 ~~i~~~GGga~s~~~~Qi~ADv~--------g~pV~~~~~-~e~~alGaA~lA~~ 450 (506)
T 3h3n_X 405 PLLKVDGGAAKNDLLMQFQADIL--------DIDVQRAAN-LETTALGAAYLAGL 450 (506)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHH--------TSEEEECSS-SCHHHHHHHHHHHH
T ss_pred CEEEEecccccCHHHHHHHHHHh--------CCeEEecCC-CcchhHHHHHHHHH
Confidence 56999999998777766555444 334443332 23566798888854
No 107
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=22.55 E-value=51 Score=28.32 Aligned_cols=65 Identities=15% Similarity=0.164 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCHHHHHHh---hcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhh
Q psy2717 128 IHETVYNSIMKCDVDIRKDL---YANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 128 l~~~I~~si~~~~~d~r~~l---~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila 201 (229)
+-|.|...+..+=..+++.. .+.|.++||.|+=+-+.+.+.+-+ ..+|..+.... .+-+|++++|
T Consensus 382 vlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~--------g~pV~~~~~~e-~~alGaA~la 449 (501)
T 3g25_A 382 TLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIV--------NTSVERPEIQE-TTALGAAFLA 449 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHH--------TSEEEEESCCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHHHh--------CCceEecCCCc-chHHHHHHHH
No 108
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=22.51 E-value=1.3e+02 Score=25.57 Aligned_cols=27 Identities=4% Similarity=-0.155 Sum_probs=21.3
Q ss_pred eEEecCCCeeEEEEe-eCCeecccccee
Q psy2717 5 KLSTVSLHNKYSNPY-GNGYALPHAILR 31 (229)
Q Consensus 5 lVVDiG~~~t~v~pV-~~G~~~~~~~~~ 31 (229)
+.||+|.+++.++.+ .+|.++......
T Consensus 3 lgiDiGtt~~k~~l~d~~g~~l~~~~~~ 30 (484)
T 2itm_A 3 IGIDLGTSGVKVILLNEQGEVVAAQTEK 30 (484)
T ss_dssp EEEEECSSEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEecCcccEEEEECCCCCEEEEEEec
Confidence 679999999999988 478887665433
No 109
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=21.80 E-value=1.4e+02 Score=25.41 Aligned_cols=29 Identities=0% Similarity=-0.209 Sum_probs=22.6
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccceee
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAILRL 32 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~~~ 32 (229)
-+.||+|.+++.++.+ .+|.++.......
T Consensus 5 ~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~ 34 (497)
T 2zf5_O 5 VLSLDEGTTSARAIIFDRESNIHGIGQYEF 34 (497)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEEEC
T ss_pred EEEEecCCchhEEEEECCCCCEEEEEEecc
Confidence 4789999999999988 4688776655444
No 110
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=21.68 E-value=1.3e+02 Score=25.82 Aligned_cols=29 Identities=7% Similarity=-0.098 Sum_probs=22.5
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccceee
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAILRL 32 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~~~ 32 (229)
-+.||+|.+++.++-+ .+|.++.......
T Consensus 28 ~lgIDiGtts~k~~l~d~~G~il~~~~~~~ 57 (520)
T 4e1j_A 28 ILAIDQGTTSTRAIVFDGNQKIAGVGQKEF 57 (520)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEEEeCCcceEEEEECCCCCEEEEEEEec
Confidence 3679999999999988 5788876654443
No 111
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=21.66 E-value=1.6e+02 Score=23.05 Aligned_cols=47 Identities=9% Similarity=-0.004 Sum_probs=31.5
Q ss_pred ceeEEecCCCeeEEEEe-eCCeeccccceeec-ccHHHHHHHHHHHHHh
Q psy2717 3 TRKLSTVSLHNKYSNPY-GNGYALPHAILRLD-LAGRDLTDYLMKILTE 49 (229)
Q Consensus 3 sglVVDiG~~~t~v~pV-~~G~~~~~~~~~~~-~GG~~l~~~l~~ll~~ 49 (229)
.-+.||||.+.+.++-+ .+|.++.......+ -....+-+.+.+.+.+
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~i~~~~~~ 53 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEMKVFLAE 53 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECSTTCHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCeEEEEEECCCCCEEEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 35789999999999888 57888765433322 2345566666666654
No 112
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=20.81 E-value=72 Score=27.18 Aligned_cols=40 Identities=13% Similarity=0.323 Sum_probs=31.3
Q ss_pred ccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 160 YPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 160 i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
.|+|.+++++-|+.+.|. .+|.+....| .+=+||+++|..
T Consensus 397 ~P~f~~~l~~~l~~l~~~-~~v~~~~s~D---GSg~GAAl~AA~ 436 (445)
T 3hm8_A 397 HPRFSSLVAATVRELAPR-CVVTFLQSED---GSGKGAALVTAV 436 (445)
T ss_dssp CTTHHHHHHHHHHHHCTT-EEEEEEECSS---CHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHhCCC-CcEEEEECCC---CchHHHHHHHHH
Confidence 699999999999999875 3666655553 466899998865
No 113
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=20.56 E-value=67 Score=27.61 Aligned_cols=40 Identities=20% Similarity=0.412 Sum_probs=31.4
Q ss_pred ccchHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcc
Q psy2717 160 YPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 203 (229)
Q Consensus 160 i~Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l 203 (229)
.|+|.+|+++-|+.+.|. .+|.+.... ..+=+||+++|.+
T Consensus 421 yp~f~~~~~~~l~~l~~~-~~v~l~~a~---DGSg~GAAliAa~ 460 (470)
T 3f9m_A 421 HPSFKERFHASVRRLTPS-CEITFIESE---EGSGRGAALVSAV 460 (470)
T ss_dssp CTTHHHHHHHHHHHHCTT-EEEEEEECS---SHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHcCC-CeEEEEEcC---CCcHHHHHHHHHH
Confidence 699999999999998864 366665554 4577899998865
No 114
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=20.48 E-value=1.6e+02 Score=25.19 Aligned_cols=30 Identities=10% Similarity=-0.003 Sum_probs=23.2
Q ss_pred eeEEecCCCeeEEEEe-eCCeeccccceeec
Q psy2717 4 RKLSTVSLHNKYSNPY-GNGYALPHAILRLD 33 (229)
Q Consensus 4 glVVDiG~~~t~v~pV-~~G~~~~~~~~~~~ 33 (229)
-+.||+|.+++.++.+ .+|.++.......+
T Consensus 4 ~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~ 34 (504)
T 2d4w_A 4 VLAIDQGTTSSRAIVFDHSGEIYSTGQLEHD 34 (504)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEECC
T ss_pred EEEEecCCcceEEEEECCCCCEEEEEEEecc
Confidence 3679999999999988 57887766555444
No 115
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=20.35 E-value=1.5e+02 Score=24.11 Aligned_cols=51 Identities=14% Similarity=0.015 Sum_probs=27.3
Q ss_pred eEEecC-CCCccchHH--HHHHHHHhhCC-CC-------CeEEEECCCCCccceehhhhHhh
Q psy2717 151 TVLSGG-TTMYPGIAD--RMQKEITALAP-ST-------IKIKIIAPPERKYSVWIGGSILA 201 (229)
Q Consensus 151 IiltGG-~s~i~Gl~~--RL~~el~~~~~-~~-------~~v~v~~~~~~~~~~w~Ggsila 201 (229)
|+|.|| .+..+-|-+ .+.+++..... .. .++++........++-+||+.++
T Consensus 308 IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~ 369 (373)
T 2q2r_A 308 IVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCG 369 (373)
T ss_dssp EEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHH
T ss_pred EEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHH
Confidence 666677 555566666 66666654321 11 13444333222356778887765
Done!