Query psy2719
Match_columns 808
No_of_seqs 626 out of 3752
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 23:28:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2719.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2719hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 5E-119 1E-123 1072.0 62.5 630 106-806 104-834 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 5E-118 1E-122 1054.4 65.1 617 102-781 130-811 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 4E-113 9E-118 1022.6 68.4 627 105-806 49-773 (797)
4 PRK14501 putative bifunctional 100.0 3E-110 6E-115 1002.1 64.9 627 102-806 36-713 (726)
5 PRK10117 trehalose-6-phosphate 100.0 7.6E-92 1.7E-96 780.1 39.1 384 103-510 31-455 (474)
6 TIGR02398 gluc_glyc_Psyn gluco 100.0 1.1E-89 2.4E-94 771.8 42.5 385 105-508 38-482 (487)
7 PF00982 Glyco_transf_20: Glyc 100.0 8.3E-88 1.8E-92 759.0 33.7 388 102-508 40-474 (474)
8 KOG1050|consensus 100.0 5.6E-84 1.2E-88 747.0 49.9 615 106-806 44-723 (732)
9 COG0380 OtsA Trehalose-6-phosp 100.0 7.6E-85 1.6E-89 719.1 38.2 385 101-509 51-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 4.5E-82 9.7E-87 715.6 41.4 384 102-507 31-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 1.1E-73 2.3E-78 652.4 39.5 384 102-507 36-460 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 1.7E-34 3.7E-39 343.8 44.5 435 282-790 428-1001(1050)
13 PLN02580 trehalose-phosphatase 100.0 7.7E-30 1.7E-34 277.4 25.4 232 530-806 108-366 (384)
14 PLN03017 trehalose-phosphatase 100.0 1.5E-29 3.2E-34 272.7 26.9 234 527-805 97-347 (366)
15 PLN02151 trehalose-phosphatase 100.0 2.7E-29 5.8E-34 270.0 26.1 233 528-805 85-333 (354)
16 PF02358 Trehalose_PPase: Treh 100.0 4.4E-30 9.6E-35 268.4 17.8 216 547-805 1-233 (235)
17 COG1877 OtsB Trehalose-6-phosp 100.0 4.9E-28 1.1E-32 251.3 23.9 212 532-790 8-228 (266)
18 PRK10187 trehalose-6-phosphate 100.0 8.1E-28 1.8E-32 255.1 25.8 213 542-805 13-232 (266)
19 TIGR00685 T6PP trehalose-phosp 100.0 1.8E-27 3.8E-32 250.0 24.3 217 541-806 1-232 (244)
20 COG0561 Cof Predicted hydrolas 99.9 7.9E-24 1.7E-28 225.3 18.6 208 543-806 3-248 (264)
21 PRK14099 glycogen synthase; Pr 99.9 3.7E-23 7.9E-28 237.9 24.8 202 279-510 240-480 (485)
22 PRK00654 glgA glycogen synthas 99.9 2.3E-23 5.1E-28 239.6 23.0 203 279-509 228-463 (466)
23 PRK15484 lipopolysaccharide 1, 99.9 3.2E-23 7E-28 232.3 23.2 265 218-508 99-377 (380)
24 PRK15427 colanic acid biosynth 99.9 4.2E-23 9.1E-28 233.1 23.5 261 218-508 118-405 (406)
25 PRK10513 sugar phosphate phosp 99.9 2.2E-23 4.9E-28 222.6 19.6 208 543-806 3-255 (270)
26 PLN02316 synthase/transferase 99.9 7.9E-23 1.7E-27 245.3 26.3 270 218-509 709-1034(1036)
27 PLN02939 transferase, transfer 99.9 2E-22 4.3E-27 237.6 28.9 207 278-509 722-967 (977)
28 PRK10976 putative hydrolase; P 99.9 3.6E-23 7.8E-28 220.5 19.6 207 544-806 3-251 (266)
29 PLN00142 sucrose synthase 99.9 1.9E-22 4.1E-27 237.0 26.2 321 146-506 377-768 (815)
30 PRK15126 thiamin pyrimidine py 99.9 4.1E-23 8.8E-28 220.8 18.8 207 544-806 3-249 (272)
31 cd03792 GT1_Trehalose_phosphor 99.9 2.3E-22 4.9E-27 224.8 24.8 289 180-508 61-371 (372)
32 TIGR02472 sucr_P_syn_N sucrose 99.9 9.4E-23 2E-27 232.9 21.2 211 279-506 207-438 (439)
33 TIGR03449 mycothiol_MshA UDP-N 99.9 9.9E-22 2.1E-26 222.0 28.6 213 277-509 183-402 (405)
34 TIGR02095 glgA glycogen/starch 99.9 4.1E-22 8.9E-27 229.9 24.6 202 279-508 236-472 (473)
35 PRK14098 glycogen synthase; Pr 99.9 3.2E-22 6.9E-27 230.3 23.5 203 279-509 252-486 (489)
36 TIGR02470 sucr_synth sucrose s 99.9 2.5E-21 5.4E-26 227.7 28.8 211 281-506 497-745 (784)
37 PLN02887 hydrolase family prot 99.9 6.3E-22 1.4E-26 228.1 21.2 215 534-806 301-566 (580)
38 TIGR03088 stp2 sugar transfera 99.9 7.1E-21 1.5E-25 212.6 28.8 207 279-508 158-372 (374)
39 PRK01158 phosphoglycolate phos 99.9 7.1E-22 1.5E-26 205.8 17.9 199 543-806 3-216 (230)
40 PRK03669 mannosyl-3-phosphogly 99.9 2.1E-21 4.6E-26 207.4 21.5 201 542-806 6-255 (271)
41 PF08282 Hydrolase_3: haloacid 99.9 1.8E-21 3.9E-26 204.3 18.6 201 546-806 1-245 (254)
42 cd03813 GT1_like_3 This family 99.9 4.7E-21 1E-25 221.0 21.2 201 277-505 263-473 (475)
43 cd03796 GT1_PIG-A_like This fa 99.9 5.3E-21 1.1E-25 215.8 20.7 202 279-511 166-370 (398)
44 TIGR01487 SPP-like sucrose-pho 99.9 5.3E-21 1.1E-25 197.3 18.4 198 544-806 2-206 (215)
45 cd03818 GT1_ExpC_like This fam 99.9 6.8E-21 1.5E-25 214.8 20.4 207 281-503 177-395 (396)
46 PLN02871 UDP-sulfoquinovose:DA 99.9 9.8E-21 2.1E-25 218.0 21.9 196 280-509 228-435 (465)
47 PRK10530 pyridoxal phosphate ( 99.9 7E-21 1.5E-25 203.5 19.0 207 543-806 3-258 (272)
48 TIGR01482 SPP-subfamily Sucros 99.9 4.5E-21 9.8E-26 199.0 17.0 196 546-806 1-208 (225)
49 cd03791 GT1_Glycogen_synthase_ 99.9 1.7E-20 3.7E-25 216.7 22.6 201 279-507 241-475 (476)
50 TIGR02149 glgA_Coryne glycogen 99.9 2.1E-20 4.6E-25 209.5 21.9 207 279-509 167-387 (388)
51 TIGR00099 Cof-subfamily Cof su 99.9 1.6E-20 3.4E-25 199.1 19.6 206 545-806 1-247 (256)
52 cd03800 GT1_Sucrose_synthase T 99.9 2E-19 4.4E-24 201.6 29.1 205 280-503 186-397 (398)
53 cd04951 GT1_WbdM_like This fam 99.9 1.2E-19 2.6E-24 200.2 26.0 263 218-507 79-359 (360)
54 TIGR01484 HAD-SF-IIB HAD-super 99.9 9E-21 1.9E-25 193.8 15.7 190 545-789 1-204 (204)
55 PHA01633 putative glycosyl tra 99.8 4.3E-20 9.4E-25 200.3 20.8 189 286-503 118-334 (335)
56 PRK15490 Vi polysaccharide bio 99.8 1.3E-19 2.8E-24 204.6 25.2 205 278-508 359-575 (578)
57 cd05844 GT1_like_7 Glycosyltra 99.8 7E-20 1.5E-24 203.4 22.6 194 278-503 162-365 (367)
58 PRK15179 Vi polysaccharide bio 99.8 1.1E-19 2.3E-24 214.4 23.6 203 277-506 478-691 (694)
59 TIGR01486 HAD-SF-IIB-MPGP mann 99.8 7.8E-20 1.7E-24 193.7 18.8 200 545-807 1-244 (256)
60 TIGR01485 SPP_plant-cyano sucr 99.8 3.8E-20 8.2E-25 195.3 15.7 204 543-800 1-221 (249)
61 PLN02949 transferase, transfer 99.8 1.9E-19 4.1E-24 205.3 22.2 208 281-509 243-457 (463)
62 cd03812 GT1_CapH_like This fam 99.8 1.3E-19 2.8E-24 200.3 19.2 175 280-480 158-337 (358)
63 PTZ00174 phosphomannomutase; P 99.8 1.7E-19 3.6E-24 189.9 18.9 204 542-804 4-246 (247)
64 cd03793 GT1_Glycogen_synthase_ 99.8 9.9E-19 2.1E-23 197.5 24.4 284 218-507 148-585 (590)
65 cd04962 GT1_like_5 This family 99.8 7.4E-19 1.6E-23 195.5 23.3 200 279-508 163-370 (371)
66 cd03819 GT1_WavL_like This fam 99.8 4.9E-19 1.1E-23 195.4 20.2 254 218-493 78-349 (355)
67 cd04946 GT1_AmsK_like This fam 99.8 3.3E-18 7.2E-23 193.5 27.3 197 277-503 203-406 (407)
68 PRK10307 putative glycosyl tra 99.8 3.5E-18 7.7E-23 193.7 26.8 207 277-510 190-409 (412)
69 TIGR02918 accessory Sec system 99.8 1.1E-18 2.3E-23 201.0 22.1 194 278-508 294-499 (500)
70 cd03806 GT1_ALG11_like This fa 99.8 1.1E-18 2.4E-23 197.9 21.3 196 281-497 212-415 (419)
71 PHA01630 putative group 1 glyc 99.8 1.4E-18 3E-23 190.4 20.0 188 281-508 118-330 (331)
72 cd03821 GT1_Bme6_like This fam 99.8 8.1E-18 1.8E-22 184.9 24.7 202 278-503 168-374 (375)
73 PRK00192 mannosyl-3-phosphogly 99.8 3.2E-18 7E-23 183.0 20.3 199 543-803 4-252 (273)
74 TIGR02471 sucr_syn_bact_C sucr 99.8 8.1E-19 1.8E-23 183.6 15.3 198 545-806 1-222 (236)
75 cd03809 GT1_mtfB_like This fam 99.8 2.7E-18 5.9E-23 189.1 20.2 201 279-503 162-364 (365)
76 cd03822 GT1_ecORF704_like This 99.8 2E-17 4.4E-22 182.2 26.7 205 281-506 156-365 (366)
77 cd03805 GT1_ALG2_like This fam 99.8 3.8E-18 8.3E-23 191.5 21.1 201 283-501 181-391 (392)
78 cd03807 GT1_WbnK_like This fam 99.8 4.4E-18 9.6E-23 186.2 20.0 201 279-506 157-364 (365)
79 cd03820 GT1_amsD_like This fam 99.8 5.4E-18 1.2E-22 184.0 20.1 190 279-503 154-347 (348)
80 cd04949 GT1_gtfA_like This fam 99.8 7.8E-18 1.7E-22 187.9 21.2 186 283-501 182-371 (372)
81 PRK09922 UDP-D-galactose:(gluc 99.8 1.2E-17 2.5E-22 186.0 22.4 254 218-508 84-355 (359)
82 cd03799 GT1_amsK_like This is 99.8 1.4E-17 3E-22 183.5 22.0 193 278-500 151-353 (355)
83 PLN02846 digalactosyldiacylgly 99.8 2.2E-17 4.7E-22 186.1 23.7 187 285-508 200-391 (462)
84 TIGR02463 MPGP_rel mannosyl-3- 99.8 1E-17 2.2E-22 173.5 18.6 184 545-789 1-220 (221)
85 PLN02382 probable sucrose-phos 99.8 1E-17 2.2E-22 187.9 16.8 209 540-803 6-235 (413)
86 cd03801 GT1_YqgM_like This fam 99.8 7.4E-17 1.6E-21 175.9 23.3 201 281-506 168-373 (374)
87 cd03795 GT1_like_4 This family 99.7 2.9E-17 6.3E-22 181.1 19.2 183 281-492 160-349 (357)
88 PLN02423 phosphomannomutase 99.7 4.9E-17 1.1E-21 170.7 19.1 195 542-797 6-238 (245)
89 cd03814 GT1_like_2 This family 99.7 7.9E-17 1.7E-21 177.2 21.7 193 281-506 165-363 (364)
90 cd03816 GT1_ALG1_like This fam 99.7 4.7E-17 1E-21 184.6 20.0 201 277-504 179-409 (415)
91 cd03808 GT1_cap1E_like This fa 99.7 4.4E-16 9.6E-21 169.8 26.8 193 280-503 162-358 (359)
92 cd03798 GT1_wlbH_like This fam 99.7 3.1E-16 6.6E-21 171.8 25.5 204 279-508 169-376 (377)
93 PRK10117 trehalose-6-phosphate 99.7 1.3E-18 2.7E-23 194.9 5.7 88 1-98 21-108 (474)
94 cd03817 GT1_UGDG_like This fam 99.7 4.2E-16 9.1E-21 171.4 25.5 198 280-506 169-371 (374)
95 cd03823 GT1_ExpE7_like This fa 99.7 1.2E-15 2.7E-20 167.1 28.2 189 280-506 165-357 (359)
96 PRK14502 bifunctional mannosyl 99.7 2.2E-16 4.7E-21 181.2 21.4 188 542-791 415-658 (694)
97 PRK10125 putative glycosyl tra 99.7 1.1E-16 2.3E-21 180.7 18.5 186 281-507 212-403 (405)
98 cd03802 GT1_AviGT4_like This f 99.7 3E-16 6.4E-21 171.7 21.0 180 281-505 150-333 (335)
99 cd03794 GT1_wbuB_like This fam 99.7 9.7E-16 2.1E-20 169.1 25.1 200 277-503 184-394 (394)
100 TIGR02398 gluc_glyc_Psyn gluco 99.7 7.9E-18 1.7E-22 190.5 6.9 92 1-98 25-117 (487)
101 cd04955 GT1_like_6 This family 99.7 1.4E-15 3.1E-20 168.1 24.0 193 284-506 167-362 (363)
102 TIGR03087 stp1 sugar transfera 99.7 6E-16 1.3E-20 174.7 20.8 192 280-507 195-395 (397)
103 cd03804 GT1_wbaZ_like This fam 99.7 3.9E-16 8.3E-21 172.9 18.6 172 283-502 176-350 (351)
104 PLN02501 digalactosyldiacylgly 99.7 3.7E-16 8.1E-21 178.2 18.1 181 288-506 521-707 (794)
105 PLN02275 transferase, transfer 99.7 5.4E-16 1.2E-20 173.4 17.5 161 283-472 188-371 (371)
106 TIGR02400 trehalose_OtsA alpha 99.7 1.5E-17 3.3E-22 189.2 4.8 105 1-113 22-134 (456)
107 PF00534 Glycos_transf_1: Glyc 99.7 5.8E-16 1.3E-20 153.3 14.4 154 309-487 13-170 (172)
108 cd03825 GT1_wcfI_like This fam 99.7 4.6E-15 1E-19 164.0 20.7 195 280-508 158-364 (365)
109 TIGR02461 osmo_MPG_phos mannos 99.7 2.4E-15 5.2E-20 155.9 16.5 187 545-790 1-225 (225)
110 cd03811 GT1_WabH_like This fam 99.6 3.2E-15 6.9E-20 162.3 17.9 168 280-473 158-331 (353)
111 COG0297 GlgA Glycogen synthase 99.6 5.2E-14 1.1E-18 158.9 23.5 203 280-509 240-478 (487)
112 PRK14501 putative bifunctional 99.6 3.3E-16 7.1E-21 189.1 5.5 92 1-98 27-118 (726)
113 PRK12702 mannosyl-3-phosphogly 99.6 2.5E-14 5.4E-19 149.4 18.6 189 544-791 2-253 (302)
114 KOG1111|consensus 99.6 1.4E-14 3.1E-19 151.4 14.4 167 279-473 167-334 (426)
115 PF05116 S6PP: Sucrose-6F-phos 99.6 3.8E-15 8.3E-20 156.5 9.2 158 620-794 34-212 (247)
116 PF00982 Glyco_transf_20: Glyc 99.6 2.8E-16 6E-21 178.4 -0.2 106 1-113 31-148 (474)
117 PLN03064 alpha,alpha-trehalose 99.6 6.4E-16 1.4E-20 185.3 2.5 89 1-98 121-216 (934)
118 cd03788 GT1_TPS Trehalose-6-Ph 99.6 1.7E-15 3.8E-20 173.5 5.7 104 1-113 27-138 (460)
119 PRK05749 3-deoxy-D-manno-octul 99.6 3.4E-13 7.5E-18 153.6 23.6 164 309-493 231-406 (425)
120 COG0380 OtsA Trehalose-6-phosp 99.5 2.2E-15 4.9E-20 167.9 4.3 104 1-113 43-154 (486)
121 PLN02205 alpha,alpha-trehalose 99.5 2.2E-15 4.8E-20 181.7 3.8 90 1-98 89-185 (854)
122 PLN03063 alpha,alpha-trehalose 99.5 4E-15 8.6E-20 179.5 3.1 88 1-98 38-132 (797)
123 cd04950 GT1_like_1 Glycosyltra 99.5 2E-12 4.3E-17 144.8 20.2 192 281-508 173-371 (373)
124 PLN02605 monogalactosyldiacylg 99.4 6.3E-11 1.4E-15 133.2 26.8 193 279-504 171-377 (382)
125 COG0438 RfaG Glycosyltransfera 99.4 2.5E-11 5.3E-16 130.7 21.4 200 282-508 173-376 (381)
126 KOG0853|consensus 99.4 1.9E-11 4.2E-16 136.2 20.5 213 283-507 236-466 (495)
127 COG3769 Predicted hydrolase (H 99.1 6.2E-10 1.4E-14 109.3 13.9 188 543-791 7-236 (274)
128 PRK00726 murG undecaprenyldiph 99.1 4.1E-09 8.9E-14 117.2 22.6 191 279-507 152-356 (357)
129 PRK13609 diacylglycerol glucos 99.1 1.5E-08 3.3E-13 113.7 27.1 164 310-508 201-371 (380)
130 TIGR00236 wecB UDP-N-acetylglu 99.1 3.1E-09 6.7E-14 118.6 21.1 225 218-474 86-334 (365)
131 TIGR01133 murG undecaprenyldip 99.1 2.5E-09 5.4E-14 118.2 19.6 181 283-500 152-346 (348)
132 KOG3189|consensus 99.1 1.8E-09 4E-14 104.3 14.4 199 542-796 10-243 (252)
133 KOG1387|consensus 99.1 7.3E-09 1.6E-13 108.3 19.1 206 281-509 244-459 (465)
134 PRK13608 diacylglycerol glucos 99.1 5.6E-08 1.2E-12 109.6 28.2 167 311-512 203-375 (391)
135 cd03785 GT1_MurG MurG is an N- 99.1 8.3E-09 1.8E-13 114.1 21.1 179 280-495 151-344 (350)
136 PF13692 Glyco_trans_1_4: Glyc 99.0 9.9E-10 2.2E-14 104.0 10.2 128 311-473 2-134 (135)
137 cd03786 GT1_UDP-GlcNAc_2-Epime 99.0 7.4E-09 1.6E-13 115.2 18.8 226 219-475 89-338 (363)
138 TIGR03713 acc_sec_asp1 accesso 98.8 1.3E-07 2.8E-12 109.6 18.7 166 309-496 319-509 (519)
139 PRK00025 lpxB lipid-A-disaccha 98.8 3.1E-07 6.7E-12 103.0 21.2 133 310-475 185-342 (380)
140 cd01635 Glycosyltransferase_GT 98.8 5.1E-08 1.1E-12 99.5 13.0 112 315-450 108-220 (229)
141 PF03332 PMM: Eukaryotic phosp 98.7 5.2E-08 1.1E-12 97.7 10.8 175 610-796 2-212 (220)
142 PRK09814 beta-1,6-galactofuran 98.5 9.7E-06 2.1E-10 89.4 19.5 91 390-490 209-313 (333)
143 PF05693 Glycogen_syn: Glycoge 98.4 1.5E-05 3.3E-10 90.9 18.4 114 388-505 444-578 (633)
144 smart00775 LNS2 LNS2 domain. T 98.3 1.7E-06 3.8E-11 84.4 7.9 72 545-656 1-89 (157)
145 PF13524 Glyco_trans_1_2: Glyc 98.3 4E-06 8.6E-11 74.0 9.5 87 410-503 1-91 (92)
146 KOG1050|consensus 98.3 2.2E-07 4.8E-12 109.8 1.1 89 1-97 31-124 (732)
147 TIGR02094 more_P_ylases alpha- 98.2 7E-05 1.5E-09 88.2 20.9 148 310-472 388-554 (601)
148 PRK11133 serB phosphoserine ph 98.2 5.1E-07 1.1E-11 98.4 2.8 57 743-806 246-306 (322)
149 TIGR00215 lpxB lipid-A-disacch 98.2 0.00014 2.9E-09 82.0 22.4 135 309-475 189-348 (385)
150 TIGR01670 YrbI-phosphatas 3-de 98.2 4.7E-06 1E-10 81.2 7.7 56 745-807 76-136 (154)
151 TIGR02919 accessory Sec system 98.1 5.3E-05 1.1E-09 86.0 16.6 122 327-476 291-413 (438)
152 PRK09484 3-deoxy-D-manno-octul 98.0 7.7E-06 1.7E-10 82.1 6.2 54 745-805 96-154 (183)
153 TIGR02726 phenyl_P_delta pheny 98.0 1.9E-05 4.1E-10 78.0 7.5 55 745-806 82-141 (169)
154 TIGR01689 EcbF-BcbF capsule bi 97.8 2.6E-05 5.7E-10 72.7 5.9 37 544-580 2-39 (126)
155 cd01427 HAD_like Haloacid deha 97.8 6.7E-05 1.4E-09 70.1 8.3 56 545-640 1-59 (139)
156 cd04299 GT1_Glycogen_Phosphory 97.7 0.0017 3.7E-08 78.3 19.1 132 312-458 479-617 (778)
157 TIGR01684 viral_ppase viral ph 97.7 8.9E-05 1.9E-09 78.2 7.0 71 543-656 126-201 (301)
158 COG0560 SerB Phosphoserine pho 97.3 0.00084 1.8E-08 69.0 8.2 55 743-804 142-200 (212)
159 PHA03398 viral phosphatase sup 97.2 0.00052 1.1E-08 72.6 6.3 68 543-655 128-202 (303)
160 COG1519 KdtA 3-deoxy-D-manno-o 96.8 0.2 4.3E-06 55.7 21.9 159 311-493 231-404 (419)
161 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.7 0.0014 3.1E-08 69.2 4.6 31 544-580 2-32 (249)
162 TIGR01681 HAD-SF-IIIC HAD-supe 96.5 0.005 1.1E-07 58.0 5.7 37 544-580 1-44 (128)
163 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.4 0.0033 7.2E-08 66.7 4.7 46 544-592 2-47 (257)
164 TIGR01662 HAD-SF-IIIA HAD-supe 96.4 0.0038 8.3E-08 58.8 4.4 37 544-580 1-40 (132)
165 PRK10444 UMP phosphatase; Prov 96.1 0.006 1.3E-07 64.3 4.7 42 544-592 2-43 (248)
166 TIGR01664 DNA-3'-Pase DNA 3'-p 96.1 0.015 3.3E-07 57.3 7.0 38 543-580 13-57 (166)
167 PLN02645 phosphoglycolate phos 96.0 0.0087 1.9E-07 65.4 5.7 52 528-592 19-70 (311)
168 KOG2941|consensus 95.9 0.17 3.8E-06 54.2 14.0 169 309-506 253-436 (444)
169 TIGR01452 PGP_euk phosphoglyco 95.8 0.01 2.2E-07 63.8 4.9 42 544-592 3-44 (279)
170 PF13844 Glyco_transf_41: Glyc 95.8 0.24 5.2E-06 56.5 15.8 171 309-508 283-466 (468)
171 COG1778 Low specificity phosph 95.6 0.0044 9.5E-08 58.9 0.8 55 744-805 82-141 (170)
172 TIGR01672 AphA HAD superfamily 95.3 0.039 8.5E-07 57.6 6.9 21 609-630 119-139 (237)
173 TIGR00213 GmhB_yaeD D,D-heptos 95.1 0.017 3.7E-07 57.4 3.5 37 544-580 2-41 (176)
174 COG1778 Low specificity phosph 95.1 0.023 5E-07 54.1 4.0 20 621-640 51-70 (170)
175 COG2179 Predicted hydrolase of 94.4 0.11 2.4E-06 50.2 6.7 62 541-646 26-87 (175)
176 TIGR03492 conserved hypothetic 94.4 1.3 2.8E-05 50.1 16.5 140 312-474 208-364 (396)
177 TIGR01656 Histidinol-ppas hist 94.3 0.037 8E-07 53.3 3.4 36 545-580 2-42 (147)
178 PF13344 Hydrolase_6: Haloacid 94.0 0.059 1.3E-06 48.4 3.8 29 546-580 1-29 (101)
179 PHA02530 pseT polynucleotide k 93.9 0.13 2.9E-06 55.7 7.2 57 542-638 157-220 (300)
180 TIGR01668 YqeG_hyp_ppase HAD s 93.7 0.14 3E-06 50.7 6.2 36 541-580 23-58 (170)
181 PF08645 PNK3P: Polynucleotide 93.5 0.07 1.5E-06 52.2 3.7 37 544-580 1-44 (159)
182 TIGR01460 HAD-SF-IIA Haloacid 92.9 0.14 2.9E-06 53.7 5.0 29 546-580 1-29 (236)
183 TIGR01261 hisB_Nterm histidino 92.5 0.1 2.2E-06 51.2 3.2 37 544-580 2-44 (161)
184 PF07429 Glyco_transf_56: 4-al 92.4 1.9 4.2E-05 46.9 12.8 141 311-472 185-331 (360)
185 PRK06769 hypothetical protein; 92.4 0.13 2.7E-06 51.2 3.8 39 542-580 3-43 (173)
186 PRK11009 aphA acid phosphatase 92.4 0.28 6.1E-06 51.2 6.4 23 608-631 118-140 (237)
187 TIGR01663 PNK-3'Pase polynucle 92.4 0.23 5E-06 57.8 6.3 51 541-592 166-223 (526)
188 PRK08942 D,D-heptose 1,7-bisph 92.3 0.12 2.6E-06 51.6 3.5 38 543-580 3-44 (181)
189 PRK13223 phosphoglycolate phos 92.0 0.38 8.3E-06 51.4 7.1 59 743-805 156-221 (272)
190 TIGR01675 plant-AP plant acid 91.9 0.28 6.1E-06 50.7 5.7 17 541-557 75-91 (229)
191 PRK05446 imidazole glycerol-ph 91.7 0.21 4.6E-06 55.2 4.8 48 543-591 2-55 (354)
192 PF09419 PGP_phosphatase: Mito 91.6 0.27 5.9E-06 48.3 5.0 37 540-580 38-74 (168)
193 COG0707 MurG UDP-N-acetylgluco 91.4 8.2 0.00018 43.0 17.0 82 399-489 244-338 (357)
194 PRK09552 mtnX 2-hydroxy-3-keto 91.3 0.23 4.9E-06 51.3 4.3 16 543-558 3-18 (219)
195 TIGR01685 MDP-1 magnesium-depe 91.3 0.33 7.1E-06 48.2 5.2 32 607-639 48-80 (174)
196 TIGR01549 HAD-SF-IA-v1 haloaci 91.3 0.21 4.6E-06 48.1 3.9 30 609-639 69-98 (154)
197 PTZ00445 p36-lilke protein; Pr 91.2 0.42 9.1E-06 48.4 5.9 49 738-791 156-206 (219)
198 PRK13288 pyrophosphatase PpaX; 91.0 0.18 3.8E-06 51.7 3.2 14 544-557 4-17 (214)
199 TIGR01459 HAD-SF-IIA-hyp4 HAD- 90.8 0.3 6.6E-06 51.2 4.8 43 543-592 8-50 (242)
200 TIGR01488 HAD-SF-IB Haloacid D 90.7 0.42 9.1E-06 47.0 5.5 36 740-780 138-177 (177)
201 PF08235 LNS2: LNS2 (Lipin/Ned 90.7 0.29 6.2E-06 47.5 4.0 36 545-580 1-42 (157)
202 TIGR01533 lipo_e_P4 5'-nucleot 90.6 0.32 6.9E-06 51.7 4.7 18 541-558 73-90 (266)
203 PF02684 LpxB: Lipid-A-disacch 90.2 1.8 4E-05 48.3 10.4 132 317-476 192-342 (373)
204 TIGR01426 MGT glycosyltransfer 90.1 8.7 0.00019 43.2 16.1 99 391-502 278-386 (392)
205 PRK11590 hypothetical protein; 90.1 0.3 6.5E-06 50.1 3.9 30 609-639 100-130 (211)
206 TIGR00338 serB phosphoserine p 90.0 0.35 7.6E-06 49.6 4.4 54 745-805 152-209 (219)
207 PF06888 Put_Phosphatase: Puta 90.0 0.42 9.1E-06 49.7 4.8 15 545-559 2-16 (234)
208 PLN02954 phosphoserine phospha 89.8 0.35 7.6E-06 49.8 4.2 56 743-805 153-215 (224)
209 TIGR03590 PseG pseudaminic aci 89.5 2.8 6E-05 45.0 10.9 92 311-433 171-262 (279)
210 PF03767 Acid_phosphat_B: HAD 89.1 0.13 2.8E-06 53.5 0.3 16 541-556 70-85 (229)
211 TIGR01491 HAD-SF-IB-PSPlk HAD- 88.9 0.59 1.3E-05 47.0 5.0 49 745-800 147-199 (201)
212 smart00577 CPDc catalytic doma 88.6 0.83 1.8E-05 44.0 5.6 31 608-640 49-79 (148)
213 PRK02797 4-alpha-L-fucosyltran 88.3 8.9 0.00019 41.3 13.3 125 310-456 145-272 (322)
214 PRK13582 thrH phosphoserine ph 87.8 0.36 7.7E-06 49.0 2.6 13 544-556 2-14 (205)
215 TIGR01680 Veg_Stor_Prot vegeta 87.1 0.64 1.4E-05 49.1 3.9 16 542-557 100-115 (275)
216 TIGR03568 NeuC_NnaA UDP-N-acet 87.1 18 0.00039 40.4 15.9 71 390-473 264-338 (365)
217 TIGR01686 FkbH FkbH-like domai 87.0 1.5 3.2E-05 48.1 7.1 38 543-580 3-46 (320)
218 COG0647 NagD Predicted sugar p 86.7 0.84 1.8E-05 48.5 4.6 41 544-591 9-49 (269)
219 TIGR01489 DKMTPPase-SF 2,3-dik 86.4 1.1 2.5E-05 44.3 5.3 31 743-780 147-181 (188)
220 TIGR01525 ATPase-IB_hvy heavy 86.3 1.7 3.8E-05 51.4 7.6 50 745-805 435-489 (556)
221 TIGR02137 HSK-PSP phosphoserin 85.5 0.74 1.6E-05 47.0 3.4 48 745-803 132-183 (203)
222 PRK10671 copA copper exporting 84.9 2.7 5.9E-05 52.4 8.7 49 745-804 700-753 (834)
223 PF02350 Epimerase_2: UDP-N-ac 84.9 26 0.00056 38.9 15.5 133 309-474 179-318 (346)
224 TIGR03333 salvage_mtnX 2-hydro 84.8 1.1 2.4E-05 45.9 4.4 29 610-639 76-104 (214)
225 COG0546 Gph Predicted phosphat 84.6 0.71 1.5E-05 47.6 2.9 15 543-557 4-18 (220)
226 cd03784 GT1_Gtf_like This fami 84.5 12 0.00026 42.1 13.0 73 390-473 290-371 (401)
227 TIGR00338 serB phosphoserine p 84.0 1 2.2E-05 46.2 3.7 16 542-557 13-28 (219)
228 PF12689 Acid_PPase: Acid Phos 83.6 1.3 2.7E-05 43.8 3.9 14 544-557 4-17 (169)
229 COG0763 LpxB Lipid A disacchar 83.0 5.4 0.00012 44.1 8.8 139 323-493 203-365 (381)
230 TIGR01497 kdpB K+-transporting 82.4 4.5 9.7E-05 48.8 8.7 53 738-804 492-549 (675)
231 TIGR01652 ATPase-Plipid phosph 81.9 6.3 0.00014 50.6 10.3 56 737-805 750-811 (1057)
232 COG0241 HisB Histidinol phosph 81.6 1.6 3.4E-05 43.5 3.8 38 543-580 5-46 (181)
233 TIGR01491 HAD-SF-IB-PSPlk HAD- 80.8 2.2 4.8E-05 42.8 4.7 15 543-557 4-18 (201)
234 KOG3120|consensus 80.5 2.9 6.3E-05 42.5 5.1 20 541-560 11-30 (256)
235 PRK08238 hypothetical protein; 79.4 3.1 6.8E-05 48.1 5.9 98 544-651 11-120 (479)
236 TIGR01106 ATPase-IIC_X-K sodiu 78.6 5.5 0.00012 50.7 8.2 57 735-805 664-726 (997)
237 PF13439 Glyco_transf_4: Glyco 78.4 0.26 5.6E-06 47.7 -2.9 77 219-296 81-177 (177)
238 PF08323 Glyco_transf_5: Starc 78.2 2.2 4.8E-05 44.8 3.9 38 194-240 118-155 (245)
239 PLN02575 haloacid dehalogenase 78.2 2.8 6E-05 46.9 4.7 31 609-640 221-251 (381)
240 PRK11033 zntA zinc/cadmium/mer 78.0 6 0.00013 48.6 8.0 49 745-805 617-670 (741)
241 PLN02940 riboflavin kinase 78.0 1.4 3E-05 49.6 2.4 30 609-639 98-127 (382)
242 PF03031 NIF: NLI interacting 77.4 2.3 5.1E-05 41.2 3.5 16 544-559 1-16 (159)
243 PF05152 DUF705: Protein of un 75.4 10 0.00022 40.2 7.7 36 543-580 122-157 (297)
244 PRK10725 fructose-1-P/6-phosph 75.2 1.6 3.5E-05 43.4 1.8 33 745-781 143-179 (188)
245 TIGR01456 CECR5 HAD-superfamil 75.2 5 0.00011 44.0 5.8 30 545-580 2-31 (321)
246 TIGR01512 ATPase-IB2_Cd heavy 74.6 7.5 0.00016 45.9 7.4 49 745-804 413-467 (536)
247 TIGR01548 HAD-SF-IA-hyp1 haloa 74.5 1.6 3.4E-05 44.1 1.4 23 747-773 164-186 (197)
248 TIGR02252 DREG-2 REG-2-like, H 74.0 2.2 4.7E-05 43.1 2.4 34 747-784 163-198 (203)
249 KOG3742|consensus 74.0 3.6 7.7E-05 45.8 4.0 70 400-473 493-577 (692)
250 COG4359 Uncharacterized conser 73.8 5.1 0.00011 39.6 4.6 90 542-639 2-107 (220)
251 PRK10748 flavin mononucleotide 72.6 2.3 5E-05 44.4 2.2 41 746-790 165-208 (238)
252 PRK11587 putative phosphatase; 70.8 2.1 4.6E-05 43.9 1.4 53 747-805 141-199 (218)
253 PHA02597 30.2 hypothetical pro 70.8 2.1 4.5E-05 43.1 1.4 14 544-557 3-16 (197)
254 COG3914 Spy Predicted O-linked 70.7 32 0.0007 40.0 10.7 111 309-443 428-538 (620)
255 PLN03243 haloacid dehalogenase 70.5 4.5 9.7E-05 43.0 3.8 54 746-805 167-226 (260)
256 KOG1615|consensus 70.4 7.1 0.00015 39.0 4.8 21 534-556 9-29 (227)
257 TIGR02253 CTE7 HAD superfamily 70.3 4.7 0.0001 41.2 3.9 41 746-790 152-195 (221)
258 TIGR02009 PGMB-YQAB-SF beta-ph 70.2 2.2 4.7E-05 42.2 1.3 32 746-781 144-179 (185)
259 TIGR01522 ATPase-IIA2_Ca golgi 70.1 19 0.00041 45.3 9.8 54 737-804 600-659 (884)
260 PLN02770 haloacid dehalogenase 69.1 2.7 5.8E-05 44.2 1.8 54 746-805 166-227 (248)
261 TIGR01517 ATPase-IIB_Ca plasma 68.8 10 0.00023 47.9 7.2 57 735-805 649-711 (941)
262 TIGR02250 FCP1_euk FCP1-like p 67.4 12 0.00025 36.5 5.7 33 606-640 60-92 (156)
263 TIGR03351 PhnX-like phosphonat 67.4 3.5 7.5E-05 42.2 2.2 32 746-781 147-183 (220)
264 PLN02779 haloacid dehalogenase 67.1 3.3 7.2E-05 44.6 2.0 53 747-805 205-264 (286)
265 TIGR02245 HAD_IIID1 HAD-superf 66.9 11 0.00023 38.2 5.5 40 541-580 19-60 (195)
266 TIGR01993 Pyr-5-nucltdase pyri 66.8 4.5 9.8E-05 40.1 2.8 23 746-772 143-165 (184)
267 PRK14986 glycogen phosphorylas 66.8 96 0.0021 38.2 14.2 150 309-466 541-702 (815)
268 COG4641 Uncharacterized protei 66.6 23 0.00049 39.2 8.2 107 397-509 247-362 (373)
269 PF00343 Phosphorylase: Carboh 66.4 1.5E+02 0.0033 36.0 15.6 149 309-466 442-603 (713)
270 TIGR01545 YfhB_g-proteo haloac 66.3 3.3 7.2E-05 42.4 1.8 24 767-793 177-204 (210)
271 PRK14988 GMP/IMP nucleotidase; 66.2 2.9 6.2E-05 43.3 1.3 42 746-791 151-195 (224)
272 PF06437 ISN1: IMP-specific 5' 66.1 2.2E+02 0.0049 31.7 15.6 55 729-794 336-403 (408)
273 COG3882 FkbH Predicted enzyme 66.0 39 0.00085 38.5 9.9 33 311-343 44-76 (574)
274 TIGR02251 HIF-SF_euk Dullard-l 65.9 11 0.00023 36.9 5.2 29 609-639 47-75 (162)
275 COG4030 Uncharacterized protei 65.7 12 0.00026 38.2 5.4 53 743-800 189-246 (315)
276 PRK10517 magnesium-transportin 65.2 39 0.00084 42.6 11.1 57 735-805 618-679 (902)
277 TIGR01647 ATPase-IIIA_H plasma 64.9 29 0.00062 42.9 9.8 57 735-805 515-576 (755)
278 TIGR01990 bPGM beta-phosphoglu 64.7 4.3 9.3E-05 40.1 2.2 33 745-781 142-178 (185)
279 PHA03392 egt ecdysteroid UDP-g 64.5 83 0.0018 36.9 13.0 101 390-503 348-465 (507)
280 PRK13226 phosphoglycolate phos 64.0 3.3 7.2E-05 42.9 1.2 54 746-805 153-216 (229)
281 TIGR02254 YjjG/YfnB HAD superf 63.0 4.3 9.3E-05 41.4 1.9 41 746-790 154-198 (224)
282 PRK01122 potassium-transportin 62.2 26 0.00056 42.5 8.4 55 737-805 490-549 (679)
283 TIGR01422 phosphonatase phosph 62.0 4.2 9.2E-05 42.7 1.7 38 747-790 159-201 (253)
284 PLN03190 aminophospholipid tra 61.5 72 0.0016 41.4 12.6 55 737-804 853-913 (1178)
285 TIGR01493 HAD-SF-IA-v2 Haloaci 60.7 5.9 0.00013 38.8 2.3 22 748-773 143-164 (175)
286 PRK13225 phosphoglycolate phos 60.2 3.8 8.3E-05 43.8 0.9 55 745-805 196-259 (273)
287 PRK13478 phosphonoacetaldehyde 59.5 4.7 0.0001 42.8 1.5 38 747-790 161-203 (267)
288 TIGR01488 HAD-SF-IB Haloacid D 59.0 8.4 0.00018 37.7 3.1 14 545-558 1-14 (177)
289 cd04300 GT1_Glycogen_Phosphory 58.9 1.6E+02 0.0035 36.3 14.2 150 309-466 528-689 (797)
290 PLN03007 UDP-glucosyltransfera 58.7 1.1E+02 0.0024 35.6 12.7 80 391-475 348-441 (482)
291 PRK10826 2-deoxyglucose-6-phos 58.3 5.2 0.00011 41.0 1.5 40 745-790 149-192 (222)
292 COG4996 Predicted phosphatase 58.1 16 0.00034 34.2 4.3 16 544-559 1-16 (164)
293 PLN02208 glycosyltransferase f 58.0 1.9E+02 0.0041 33.2 14.3 79 392-475 315-402 (442)
294 PLN00414 glycosyltransferase f 57.5 1.6E+02 0.0035 33.9 13.6 111 392-509 316-441 (446)
295 PRK10563 6-phosphogluconate ph 57.2 6.1 0.00013 40.4 1.8 33 745-781 143-179 (221)
296 PRK14010 potassium-transportin 56.3 37 0.00081 41.1 8.4 55 737-805 486-545 (673)
297 PRK09449 dUMP phosphatase; Pro 55.8 5.6 0.00012 40.8 1.3 41 747-790 153-196 (224)
298 TIGR01428 HAD_type_II 2-haloal 55.7 6 0.00013 39.7 1.4 31 747-781 151-185 (198)
299 COG0637 Predicted phosphatase/ 55.5 6 0.00013 40.9 1.4 13 544-556 3-15 (221)
300 COG0474 MgtA Cation transport 55.1 27 0.0006 44.0 7.3 57 735-805 619-681 (917)
301 PRK13222 phosphoglycolate phos 55.0 5.9 0.00013 40.5 1.2 57 745-805 150-213 (226)
302 TIGR00661 MJ1255 conserved hyp 53.9 36 0.00078 37.1 7.3 71 394-474 235-314 (321)
303 COG4087 Soluble P-type ATPase 53.0 12 0.00026 35.0 2.8 28 547-580 18-45 (152)
304 TIGR02137 HSK-PSP phosphoserin 52.9 16 0.00034 37.3 3.9 13 544-556 2-14 (203)
305 TIGR01490 HAD-SF-IB-hyp1 HAD-s 52.9 17 0.00037 36.4 4.3 42 743-791 153-198 (202)
306 PLN02863 UDP-glucoronosyl/UDP- 52.2 2.5E+02 0.0054 32.7 14.1 112 391-508 346-471 (477)
307 PRK06698 bifunctional 5'-methy 51.6 7.4 0.00016 45.0 1.5 52 746-805 387-445 (459)
308 COG0816 Predicted endonuclease 50.9 74 0.0016 30.4 7.8 72 328-409 40-111 (141)
309 PLN02448 UDP-glycosyltransfera 50.5 66 0.0014 37.2 9.0 79 392-475 327-416 (459)
310 PLN02410 UDP-glucoronosyl/UDP- 50.3 63 0.0014 37.2 8.8 78 393-475 329-411 (451)
311 PRK14089 ipid-A-disaccharide s 50.1 1.7E+02 0.0036 32.6 11.7 28 401-433 229-256 (347)
312 TIGR02247 HAD-1A3-hyp Epoxide 49.2 9 0.0002 38.8 1.5 40 747-792 155-198 (211)
313 TIGR01657 P-ATPase-V P-type AT 49.0 54 0.0012 42.2 8.7 56 735-805 782-841 (1054)
314 COG1819 Glycosyl transferases, 49.0 2.9E+02 0.0064 31.3 13.8 100 391-505 287-397 (406)
315 PF13528 Glyco_trans_1_3: Glyc 48.7 1.8E+02 0.0039 31.2 11.8 66 397-470 240-316 (318)
316 KOG2884|consensus 48.5 2.4E+02 0.0052 28.9 11.1 37 436-472 186-227 (259)
317 PRK12446 undecaprenyldiphospho 48.4 3E+02 0.0065 30.5 13.6 68 399-474 244-325 (352)
318 TIGR01511 ATPase-IB1_Cu copper 48.4 27 0.00058 41.5 5.5 54 737-804 449-507 (562)
319 PF06941 NT5C: 5' nucleotidase 46.7 11 0.00023 37.9 1.6 24 609-633 78-101 (191)
320 PF12710 HAD: haloacid dehalog 46.4 10 0.00023 37.4 1.5 29 745-778 157-192 (192)
321 PF13419 HAD_2: Haloacid dehal 43.5 11 0.00024 36.1 1.1 11 546-556 1-11 (176)
322 COG0058 GlgP Glucan phosphoryl 43.4 4.8E+02 0.011 32.0 14.7 184 309-511 485-685 (750)
323 PF13579 Glyco_trans_4_4: Glyc 43.4 28 0.00061 32.4 3.9 20 218-237 73-92 (160)
324 KOG1618|consensus 42.6 35 0.00075 36.8 4.5 35 541-581 33-67 (389)
325 COG0381 WecB UDP-N-acetylgluco 42.3 5.4E+02 0.012 28.9 17.1 136 310-476 204-343 (383)
326 PF09949 DUF2183: Uncharacteri 42.2 66 0.0014 28.8 5.7 36 327-366 49-84 (100)
327 TIGR01509 HAD-SF-IA-v3 haloaci 41.8 11 0.00025 36.8 0.9 30 747-780 143-176 (183)
328 TIGR01116 ATPase-IIA1_Ca sarco 41.8 19 0.0004 45.5 3.0 57 735-805 611-672 (917)
329 PRK14985 maltodextrin phosphor 41.7 2.2E+02 0.0047 35.1 11.6 150 309-466 527-688 (798)
330 PRK09456 ?-D-glucose-1-phospha 41.7 13 0.00029 37.3 1.4 44 746-793 143-188 (199)
331 PF00702 Hydrolase: haloacid d 41.7 14 0.0003 37.2 1.5 29 749-781 183-215 (215)
332 KOG2134|consensus 39.0 30 0.00064 38.3 3.5 18 542-559 74-91 (422)
333 PLN00164 glucosyltransferase; 37.4 1.5E+02 0.0033 34.5 9.3 80 391-475 342-432 (480)
334 COG1011 Predicted hydrolase (H 37.4 18 0.00039 36.9 1.6 16 543-558 4-19 (229)
335 PLN02764 glycosyltransferase f 36.9 1.2E+02 0.0027 34.9 8.3 113 392-509 321-446 (453)
336 PF06258 Mito_fiss_Elm1: Mitoc 36.8 3.4E+02 0.0074 29.6 11.4 30 400-432 221-250 (311)
337 TIGR02093 P_ylase glycogen/sta 36.6 3E+02 0.0065 34.0 11.7 151 309-467 525-687 (794)
338 COG0548 ArgB Acetylglutamate k 36.2 1.2E+02 0.0025 32.3 7.3 84 534-641 171-256 (265)
339 PF11019 DUF2608: Protein of u 36.0 97 0.0021 32.7 6.8 16 542-557 19-34 (252)
340 PF15024 Glyco_transf_18: Glyc 35.1 1.3E+02 0.0028 35.4 8.0 81 393-475 327-431 (559)
341 PLN02207 UDP-glycosyltransfera 34.9 1.4E+02 0.0031 34.5 8.5 112 392-508 336-465 (468)
342 PLN03004 UDP-glycosyltransfera 34.7 1E+02 0.0022 35.6 7.2 79 391-474 337-424 (451)
343 PLN02152 indole-3-acetate beta 33.9 1.2E+02 0.0027 35.0 7.7 88 391-483 330-426 (455)
344 PF06258 Mito_fiss_Elm1: Mitoc 33.8 6.4E+02 0.014 27.5 12.9 110 310-431 112-229 (311)
345 KOG4549|consensus 32.9 59 0.0013 30.3 3.9 38 543-580 18-59 (144)
346 COG3700 AphA Acid phosphatase 32.4 69 0.0015 31.7 4.4 81 542-635 62-144 (237)
347 PLN02210 UDP-glucosyl transfer 32.3 1.4E+02 0.0031 34.4 8.0 76 393-475 329-416 (456)
348 COG3660 Predicted nucleoside-d 31.3 5.6E+02 0.012 27.4 11.0 28 401-431 238-265 (329)
349 COG2503 Predicted secreted aci 31.0 75 0.0016 33.1 4.7 20 541-560 77-96 (274)
350 cd04256 AAK_P5CS_ProBA AAK_P5C 30.7 2.2E+02 0.0047 30.7 8.6 92 531-640 184-275 (284)
351 PLN02992 coniferyl-alcohol glu 29.7 1.7E+02 0.0038 34.0 8.1 80 391-475 341-428 (481)
352 PLN02954 phosphoserine phospha 29.3 75 0.0016 32.3 4.6 15 543-557 12-26 (224)
353 PLN02167 UDP-glycosyltransfera 28.9 2.2E+02 0.0047 33.1 8.8 79 392-475 344-435 (475)
354 PTZ00489 glutamate 5-kinase; P 28.7 2.3E+02 0.0049 30.2 8.1 19 621-639 228-246 (264)
355 PLN02670 transferase, transfer 28.7 1.2E+02 0.0025 35.3 6.4 113 392-509 343-466 (472)
356 COG4483 Uncharacterized protei 28.1 51 0.0011 26.8 2.3 23 749-779 6-32 (68)
357 KOG2116|consensus 28.1 74 0.0016 37.7 4.5 39 621-659 574-616 (738)
358 TIGR01511 ATPase-IB1_Cu copper 27.1 89 0.0019 37.2 5.3 57 542-640 384-440 (562)
359 PRK05282 (alpha)-aspartyl dipe 24.7 6.8E+02 0.015 26.0 10.7 111 312-446 3-123 (233)
360 TIGR01523 ATPase-IID_K-Na pota 24.4 59 0.0013 41.7 3.3 56 736-805 727-788 (1053)
361 COG4567 Response regulator con 24.3 1.2E+02 0.0026 29.3 4.5 61 411-471 58-124 (182)
362 TIGR00071 hisT_truA pseudourid 24.3 72 0.0016 33.1 3.4 53 544-598 3-56 (227)
363 PRK13222 phosphoglycolate phos 24.2 87 0.0019 31.7 4.0 14 543-556 6-19 (226)
364 PLN02177 glycerol-3-phosphate 23.9 44 0.00096 39.0 1.9 15 543-557 22-36 (497)
365 cd03789 GT1_LPS_heptosyltransf 23.8 3.3E+02 0.0071 28.7 8.5 40 389-433 180-219 (279)
366 PRK10422 lipopolysaccharide co 23.3 4.5E+02 0.0098 28.9 9.8 86 310-415 183-270 (352)
367 cd04236 AAK_NAGS-Urea AAK_NAGS 23.2 2.4E+02 0.0051 30.2 7.1 90 526-640 173-263 (271)
368 PRK01021 lpxB lipid-A-disaccha 22.9 1.4E+03 0.03 27.5 14.5 27 402-433 483-509 (608)
369 PLN02919 haloacid dehalogenase 22.6 40 0.00088 43.2 1.3 30 609-639 166-195 (1057)
370 cd04241 AAK_FomA-like AAK_FomA 22.3 2.5E+02 0.0055 29.3 7.2 95 528-640 150-244 (252)
371 KOG0331|consensus 22.0 4.4E+02 0.0096 30.9 9.3 91 314-416 131-224 (519)
372 cd07014 S49_SppA Signal peptid 21.6 4.5E+02 0.0097 25.8 8.4 79 548-632 2-83 (177)
373 TIGR00250 RNAse_H_YqgF RNAse H 21.3 3.9E+02 0.0085 25.0 7.4 72 327-408 34-105 (130)
374 PF04312 DUF460: Protein of un 21.2 1E+02 0.0022 29.3 3.3 31 545-580 45-75 (138)
375 cd04242 AAK_G5K_ProB AAK_G5K_P 21.2 2.7E+02 0.0059 29.1 7.1 91 532-640 149-242 (251)
376 CHL00202 argB acetylglutamate 20.8 4.3E+02 0.0093 28.3 8.6 90 528-640 183-274 (284)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=4.6e-119 Score=1071.97 Aligned_cols=630 Identities=28% Similarity=0.443 Sum_probs=533.1
Q ss_pred ccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCc-----ccc
Q psy2719 106 EITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDR-----AVF 180 (808)
Q Consensus 106 ~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~-----~~~ 180 (808)
+.+++||||+|... +++++.+. ....+.+|+|+||||+++++++||+||||++|||+|||+++. ..|
T Consensus 104 ~~~~~wvG~~~~~~-------~~~~~~~~-~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~f 175 (854)
T PLN02205 104 EIEVIYVGCLKEEI-------HLNEQEEV-SQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRF 175 (854)
T ss_pred cCceEEEEecCCCC-------CchhhhhH-HHHHhcCceEEEeeCCHHHHHHHHHhhhhccccchhccCCCCCccccccc
Confidence 36799999999632 22222111 123355799999999999999999999999999999998643 379
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc--------------------
Q psy2719 181 NAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA-------------------- 240 (808)
Q Consensus 181 ~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~-------------------- 240 (808)
+.++|++|++||++||++|++.+++ .+|+|||||||||++|.+||++.
T Consensus 176 ~~~~w~~Y~~vN~~FA~~v~~~~~~------------~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr 243 (854)
T PLN02205 176 NRSLWQAYVSVNKIFADRIMEVINP------------EDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK 243 (854)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCC------------CCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHh
Confidence 9999999999999999999998852 26999999999999999999986
Q ss_pred --------------CCEEEeccHHHHHHHHHHHHHHhCceeecC--CeEEEEcCeEEEEEEeecCcCccccchhhcCc--
Q psy2719 241 --------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRN--NMLVELAGRTVHVKALPIGIPFERFVQLAENA-- 302 (808)
Q Consensus 241 --------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~--~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~-- 302 (808)
||+|||||++|+|||++||+|++|+++... .+.+.|+||.++|.++|+|||++.|.......
T Consensus 244 ~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~ 323 (854)
T PLN02205 244 TLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPET 323 (854)
T ss_pred hCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhH
Confidence 999999999999999999999999877543 24678999999999999999999997654321
Q ss_pred ----hhhhhc-C--CCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q psy2719 303 ----PENLKD-E--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVG 375 (808)
Q Consensus 303 ----~~~~~~-~--~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~ 375 (808)
.+++++ . ++++|++|||+|+.|||.++|+||++||++||++++|++||||+.|+|+++++|++++.+++++|+
T Consensus 324 ~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~ 403 (854)
T PLN02205 324 EAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403 (854)
T ss_pred HHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHH
Confidence 122222 2 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC---------------CCceEEE
Q psy2719 376 RINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR---------------EPGVLIL 440 (808)
Q Consensus 376 ~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~---------------~~g~vVl 440 (808)
+||++||+.+|.||+|+++.++++|+.|||++|||+++||+|||||||++||+||+.+ ++|++|+
T Consensus 404 rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiL 483 (854)
T PLN02205 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVV 483 (854)
T ss_pred HHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEe
Confidence 9999999999999999999999999999999999999999999999999999999974 4799999
Q ss_pred cCCCCCccccCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCC----
Q psy2719 441 SPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSD---- 516 (808)
Q Consensus 441 S~~~G~~~~l~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~---- 516 (808)
|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+|+++||.+|+++++.+...
T Consensus 484 SEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~ 563 (854)
T PLN02205 484 SEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWG 563 (854)
T ss_pred eeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999886543211
Q ss_pred -Cccchhcc------cCchhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCcccccc
Q psy2719 517 -PLSAKTLQ------LTLDDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIIS 589 (808)
Q Consensus 517 -~~~~~~~~------~~~~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~s 589 (808)
+.+..++. +...+++.++++|++ +++|+|++||||||++.... ...++++++++|++|++
T Consensus 564 ~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~-~~~rlI~LDyDGTLlp~~~~--~~~p~~~~~~~L~~L~~---------- 630 (854)
T PLN02205 564 IGFGLSFRVVALDPNFRKLSMEHIVSAYKR-TTTRAILLDYDGTLMPQASI--DKSPSSKSIDILNTLCR---------- 630 (854)
T ss_pred cccccccccccccccccccCHHHHHHHHHh-hcCeEEEEecCCcccCCccc--cCCCCHHHHHHHHHHHh----------
Confidence 11111222 112255678899976 67899999999999986532 34556666666666544
Q ss_pred ccccccccCCCCcccchHHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcCc-cceEEEcccceeEecCCCceeecC---
Q psy2719 590 GRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNI-EKVTYAGSHGLEILHPDGTKFVHP--- 665 (808)
Q Consensus 590 gr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~-~~~~li~~nG~~i~~~~~~~~~~~--- 665 (808)
+||+.|+|+|||++..|+++|+. ++++++|+||++++.+++..|...
T Consensus 631 -----------------------------d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~ 681 (854)
T PLN02205 631 -----------------------------DKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPV 681 (854)
T ss_pred -----------------------------cCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchh
Confidence 47999999999999999999975 568999999999998776556432
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEEEcCcCChhhHH----HHHHHHHHHHHhcCeeEEccCeEEEEeCC
Q psy2719 666 VPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERRE----YIIDRASQIFLEAGFEPHNALMAIEAKPP 741 (808)
Q Consensus 666 ~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~g~~~vEv~p~ 741 (808)
.+..|++.++.+++.|.++ ++|+++|.|+.++.||||.+|+++.. ++...+.+.+.+.++.+.+|++++||+|+
T Consensus 682 ~~~~w~~~v~~i~~~y~er--tpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~ 759 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTET--TDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQ 759 (854)
T ss_pred hhHHHHHHHHHHHHHHhcC--CCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeC
Confidence 3456998899999999987 99999999999999999999887643 45555555555556778899999999998
Q ss_pred CCCCHHHHHHHHHHH--hcCCCCCcceeEEEEe----CHHHHHhccCC-----------ccEEEeCCCCccccccccccC
Q psy2719 742 VKWDQGRASIHILRT--MYGVDWSERVRIIYAG----NEDAMLALQGI-----------ACTFRVDSSPTVKSSWKQGSN 804 (808)
Q Consensus 742 ~~v~KG~av~~ll~~--~~~i~~~~~~~via~G----D~~Mf~~~~~~-----------~~~vav~~~~~vk~~A~~~~~ 804 (808)
++|||.|++.|+++ .+|++.+ +++||| |++||++++.. +++|.||..+ +.|+|.++
T Consensus 760 -gvnKG~Al~~Ll~~~~~~g~~~d---~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~---S~A~y~L~ 832 (854)
T PLN02205 760 -GVSKGLVAKRLLSIMQERGMLPD---FVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKP---SKAKYYLD 832 (854)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCcc---cEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCC---ccCeEecC
Confidence 99999999999863 2577654 899999 99999999621 3678898643 88999887
Q ss_pred cC
Q psy2719 805 HT 806 (808)
Q Consensus 805 ~~ 806 (808)
+.
T Consensus 833 d~ 834 (854)
T PLN02205 833 DT 834 (854)
T ss_pred CH
Confidence 64
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=5.4e-118 Score=1054.42 Aligned_cols=617 Identities=31% Similarity=0.508 Sum_probs=519.0
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCC------
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMP------ 175 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~------ 175 (808)
++ ++.+++||||+|..... ++++. .....+.+++|+||||+++++++||+||||++|||+|||++
T Consensus 130 ~~-~~~~~~WVGw~g~~~~~------~~~~~--~~~~~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~ 200 (934)
T PLN03064 130 GV-KEFEARWIGWAGVNVPD------EVGQK--ALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDR 200 (934)
T ss_pred cc-ccCCeEEEeeCCCCCCC------cchhH--HHHHHhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccc
Confidence 44 56789999999974311 11111 12244567999999999999999999999999999999973
Q ss_pred -CccccCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc--------------
Q psy2719 176 -DRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA-------------- 240 (808)
Q Consensus 176 -~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~-------------- 240 (808)
+...|+.++|++|++||++||++|++.++ ++|+|||||||||++|+|||++.
T Consensus 201 ~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~-------------~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFP 267 (934)
T PLN03064 201 LATTRSFQSQFAAYKKANQMFADVVNEHYE-------------EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFP 267 (934)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCC
Confidence 33458889999999999999999999885 48999999999999999999986
Q ss_pred --------------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhc
Q psy2719 241 --------------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAE 300 (808)
Q Consensus 241 --------------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~ 300 (808)
||+|||||++|++||+++|.|+++.+..... +.++||.++|.++|+|||++.|.....
T Consensus 268 s~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~--v~~~Gr~v~V~~~PiGID~~~f~~~~~ 345 (934)
T PLN03064 268 SSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEG--VEDQGRLTRVAAFPIGIDSDRFIRALE 345 (934)
T ss_pred ChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCe--EEECCEEEEEEEEeCEEcHHHHHHHhc
Confidence 9999999999999999999999998766543 788999999999999999999987544
Q ss_pred Cc------hhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHH
Q psy2719 301 NA------PENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQL 373 (808)
Q Consensus 301 ~~------~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~l 373 (808)
.. ..++.. .++++|++|||||+.|||.++|+||++||++||+++++++||||+.|+|+++++|++++.++.++
T Consensus 346 ~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~ 425 (934)
T PLN03064 346 TPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEI 425 (934)
T ss_pred ChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHH
Confidence 31 122223 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-c
Q psy2719 374 VGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-E 452 (808)
Q Consensus 374 v~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~ 452 (808)
|++||++||+.+|.||+|+...++++++.+||++|||||+||++||||||++||||||..++|++|+|||+|++++|. +
T Consensus 426 V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L~~~ 505 (934)
T PLN03064 426 VGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSLGAG 505 (934)
T ss_pred HHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHhCCc
Confidence 999999999999999999999999999999999999999999999999999999999988899999999999999994 7
Q ss_pred eEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCCCccchhcccCchhhHH
Q psy2719 453 ALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDL 532 (808)
Q Consensus 453 ~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (808)
|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|+++|+.+|.+....+..... ...+ ..+.+.
T Consensus 506 AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~--~~~~--~l~~~~ 581 (934)
T PLN03064 506 AILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTR--QVPP--QLPPED 581 (934)
T ss_pred eEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhcccc--ccCC--CCCHHH
Confidence 999999999999999999999999999999999999999999999999999999987544322111 1111 235677
Q ss_pred HHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHH
Q psy2719 533 YLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRV 612 (808)
Q Consensus 533 ~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~ 612 (808)
++++|.+ +++|+|||||||||+++.++|+... .. +.. ....+++++++.
T Consensus 582 ~~~~y~~-a~~RLlfLDyDGTLap~~~~P~~~~--~~----~~~------------------------~~a~p~p~l~~~ 630 (934)
T PLN03064 582 AIQRYLQ-SNNRLLILGFNATLTEPVDTPGRRG--DQ----IKE------------------------MELRLHPELKEP 630 (934)
T ss_pred HHHHHHh-ccceEEEEecCceeccCCCCccccc--cc----ccc------------------------cccCCCHHHHHH
Confidence 8899976 5679999999999999876654110 00 000 012345566777
Q ss_pred HHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceee----cCCChhHHHHHHHHHHHHHhhccCC
Q psy2719 613 LERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFV----HPVPKEYAEKLRQLIKALQDEVCHD 688 (808)
Q Consensus 613 l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~----~~~~~~~~~~v~~i~~~~~~~~~~~ 688 (808)
|++||+||++.|+|+|||+...|+++|+..+++++|+||++++.+++ .|. ...+.+|++.+..++++|.++ ++
T Consensus 631 L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~-~w~~~~~~~~~~~W~~~v~~ile~~~eR--tP 707 (934)
T PLN03064 631 LRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKG-EWMTTMPEHLNMDWVDSVKHVFEYFTER--TP 707 (934)
T ss_pred HHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCC-cceeccccccchHHHHHHHHHHHHHHhc--CC
Confidence 77778889999999999999999999997789999999999987643 343 234568999999999999998 99
Q ss_pred CcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHH-----HhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCC--
Q psy2719 689 GAWIENKGVLLTFHYRETPIERREYIIDRASQIF-----LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVD-- 761 (808)
Q Consensus 689 g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~-- 761 (808)
|++||.|++++.||||.+|+++.+....++.+.+ .+.++.+..|+++|||+|. ++|||.|++.|+++.-.-.
T Consensus 708 GS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~-gvnKG~Av~~ll~~~~~~~~~ 786 (934)
T PLN03064 708 RSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPV-GVTKGAAIDRILGEIVHSKSM 786 (934)
T ss_pred CcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcC-CCCHHHHHHHHHHhhhhcccc
Confidence 9999999999999999998877543222222222 2346889999999999998 9999999999998621000
Q ss_pred CCcceeEEEEe-----CHHHHHhcc
Q psy2719 762 WSERVRIIYAG-----NEDAMLALQ 781 (808)
Q Consensus 762 ~~~~~~via~G-----D~~Mf~~~~ 781 (808)
....++|+|+| ||+||+++.
T Consensus 787 ~~~~DFvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 787 TTPIDYVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHh
Confidence 00123899999 799999985
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=4.3e-113 Score=1022.59 Aligned_cols=627 Identities=30% Similarity=0.471 Sum_probs=524.2
Q ss_pred cccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCC-------Cc
Q psy2719 105 LEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMP-------DR 177 (808)
Q Consensus 105 ~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~-------~~ 177 (808)
.+.+|+||||+|..... ++++. .....+.+++|+|||| ++++++||+||||++|||+|||++ +.
T Consensus 49 ~~~~~~Wvgw~g~~~~~------~~~~~--~~~~~~~~~~~~pv~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~ 119 (797)
T PLN03063 49 KEFETKWIGWPGVDVHD------EIGKA--ALTESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDA 119 (797)
T ss_pred HhcCceEEEeCCCcCCc------ccchh--HHHHHhhcCCeEEeeh-HHHHHHHHHHHHhhhcchhhcCcCCCccccccc
Confidence 45689999999974211 11111 1123456789999999 999999999999999999999982 23
Q ss_pred cccCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc-----------------
Q psy2719 178 AVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA----------------- 240 (808)
Q Consensus 178 ~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~----------------- 240 (808)
..+..++|++|++||++||++|++.++ ++|+|||||||||++|+|||++.
T Consensus 120 ~~~~~~~w~~Y~~vN~~FA~~i~~~~~-------------~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e 186 (797)
T PLN03063 120 TRTFESQYDAYKKANRMFLDVVKENYE-------------EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSE 186 (797)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHH
Confidence 345678999999999999999999885 48999999999999999999986
Q ss_pred -----------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc-
Q psy2719 241 -----------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA- 302 (808)
Q Consensus 241 -----------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~- 302 (808)
||+|||||++|++||+++|+++++++..... +.++|+.++|.++|+|||++.|.+.....
T Consensus 187 ~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~--i~~~gr~~~I~viP~GID~~~f~~~~~~~~ 264 (797)
T PLN03063 187 IYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEG--VVDQGKVTRVAVFPIGIDPERFINTCELPE 264 (797)
T ss_pred HHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCc--eEECCeEEEEEEEecccCHHHHHHHhcChh
Confidence 9999999999999999999999998766554 67899999999999999999997653321
Q ss_pred --h---hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHH
Q psy2719 303 --P---ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGR 376 (808)
Q Consensus 303 --~---~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~ 376 (808)
. .+++. .++++|++||||++.||++.+|+||++|++++|+++++++|+|++.|+++++++|+++++++++++++
T Consensus 265 ~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~ 344 (797)
T PLN03063 265 VKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGR 344 (797)
T ss_pred HHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHH
Confidence 1 12223 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-ceEE
Q psy2719 377 INGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EALL 455 (808)
Q Consensus 377 in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~~ll 455 (808)
||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||.+.+|++|+||++|+++.+. +|++
T Consensus 345 In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l~~~all 424 (797)
T PLN03063 345 INGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALL 424 (797)
T ss_pred hhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhhcCCeEE
Confidence 999999999999999999999999999999999999999999999999999999998899999999999999995 7999
Q ss_pred ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCCCccchhcccCchhhHHHHh
Q psy2719 456 VNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLN 535 (808)
Q Consensus 456 vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (808)
|||+|++++|+||.++|+|+++||++|++++++++.++|+.+|+++|+++|.++++.+..... ......+.+.++.
T Consensus 425 VnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~----~~~~~l~~~~~~~ 500 (797)
T PLN03063 425 VNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTR----NIPLELPEQDVIQ 500 (797)
T ss_pred ECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhccc----CCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998665432211 1111225677889
Q ss_pred hhhcCCCceEEEEecccccccCCCCC---CccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHH
Q psy2719 536 NYVDGNCKLSLILDYDGTLTPLTSHP---DLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRV 612 (808)
Q Consensus 536 ~y~~~~~~rli~~D~DGTLl~~~~~~---~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~ 612 (808)
+|.+ +++|+|||||||||++..+.+ ....++++++++|+
T Consensus 501 ~y~~-a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~------------------------------------- 542 (797)
T PLN03063 501 QYSK-SNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLK------------------------------------- 542 (797)
T ss_pred HHHh-ccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHH-------------------------------------
Confidence 9976 667999999999999875532 33445555555554
Q ss_pred HHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeec----CCChhHHHHHHHHHHHHHhhccCC
Q psy2719 613 LERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVH----PVPKEYAEKLRQLIKALQDEVCHD 688 (808)
Q Consensus 613 l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~----~~~~~~~~~v~~i~~~~~~~~~~~ 688 (808)
+||++|++.|+|+|||+...|+++++..+++++|+||++++.+++ .|.. .++.+|++.+..++++|.++ ++
T Consensus 543 --~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~-~w~~~~~~~~~~~w~~~v~~~l~~~~~r--tp 617 (797)
T PLN03063 543 --ALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSG-EWVTTMPEHMNLDWVDGVKNVFKYFTDR--TP 617 (797)
T ss_pred --HHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCCEEEecCCC-ceeeccccccChhHHHHHHHHHHHHHHh--CC
Confidence 555558999999999999999999997789999999999986543 4532 33567999999999999998 99
Q ss_pred CcEEEecCcEEEEEcCcCChhhHHHHHHHH-HHHH----HhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhc--CCC
Q psy2719 689 GAWIENKGVLLTFHYRETPIERREYIIDRA-SQIF----LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMY--GVD 761 (808)
Q Consensus 689 g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~--~i~ 761 (808)
|+++|.|++++.||||.+|+++......++ ..+. .+.++.+..|++++||+|+ ++|||.|++.|+++.. +..
T Consensus 618 Gs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~-gvnKG~Av~~ll~~~~~~~~~ 696 (797)
T PLN03063 618 RSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAI-GVTKGAAIGRILGEIVHNKSM 696 (797)
T ss_pred CcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcC-CCChHHHHHHHHHHhhhcccc
Confidence 999999999999999999887753222222 2221 2346889999999999998 9999999999998621 100
Q ss_pred CCcceeEEEEe-----CHHHHHhccCCc------------------------------cEEEeCCCCccccccccccCcC
Q psy2719 762 WSERVRIIYAG-----NEDAMLALQGIA------------------------------CTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 762 ~~~~~~via~G-----D~~Mf~~~~~~~------------------------------~~vav~~~~~vk~~A~~~~~~~ 806 (808)
....++|+|+| ||+||+++...+ ++++||.. .+.|+|+++++
T Consensus 697 ~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~---~s~A~y~l~~~ 773 (797)
T PLN03063 697 TTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQA---RTKARYVLDSS 773 (797)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCC---CccCeecCCCH
Confidence 00123899999 899999987433 45778864 48999998764
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=2.7e-110 Score=1002.07 Aligned_cols=627 Identities=37% Similarity=0.648 Sum_probs=540.5
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccC
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFN 181 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~ 181 (808)
++..+.+|+||||+|..... .+++++. .....+.+|+|+||||+++++++||+||||++|||+|||+++...|+
T Consensus 36 ~~~~~~~~~wvg~~g~~~~~----~~~~~~~--~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~~~~~ 109 (726)
T PRK14501 36 SFHERGGGLWVGWPGLDLEE----ESEEQRA--RIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFE 109 (726)
T ss_pred HHhhcCCeEEEEeCCCCccc----cchhhhh--hhhhhccCceEEEEeCCHHHHHHHHHHhhhccccchhcccCcccCcC
Confidence 44456789999999974321 1111111 11244567999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc---------------------
Q psy2719 182 AETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA--------------------- 240 (808)
Q Consensus 182 ~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~--------------------- 240 (808)
+++|++|++||++||++|++.++ ++|+||||||||+++|++||++.
T Consensus 110 ~~~w~~Y~~vN~~fA~~~~~~~~-------------~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~ 176 (726)
T PRK14501 110 DRFWESYERVNQRFAEAIAAIAR-------------PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRL 176 (726)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhh
Confidence 99999999999999999999875 48999999999999999999886
Q ss_pred -------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCch----
Q psy2719 241 -------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAP---- 303 (808)
Q Consensus 241 -------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~~---- 303 (808)
+|+||||+++|++||+++|.++++.++... .+.++||.++|.++|+|||++.|.+......
T Consensus 177 lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~--~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~ 254 (726)
T PRK14501 177 LPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG--EIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEE 254 (726)
T ss_pred CCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC--eEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHH
Confidence 999999999999999999999999766543 4788999999999999999999987643211
Q ss_pred --hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcc
Q psy2719 304 --ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGR 380 (808)
Q Consensus 304 --~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~ 380 (808)
.+++. .++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|+|.+.++|+++++++++++++||++
T Consensus 255 ~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~ 334 (726)
T PRK14501 255 IRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGE 334 (726)
T ss_pred HHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhh
Confidence 12223 678899999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred CCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccCceEEECCCC
Q psy2719 381 FSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYE 460 (808)
Q Consensus 381 ~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~~~llvnP~d 460 (808)
||+.+|.||+++.+.+++++++++|++||+||+||++||||||++|||||+.+.+|++|+|+++|+++++.+|++|||+|
T Consensus 335 ~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~~~llv~P~d 414 (726)
T PRK14501 335 FGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELAEALLVNPND 414 (726)
T ss_pred cCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhCcCeEECCCC
Confidence 99999999999999999999999999999999999999999999999999998889999999999999998999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCCCccchhcccCchhhHHHHhhhhcC
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLNNYVDG 540 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 540 (808)
++++|++|.++|+|+.+|++.|++++++++.++|+.+|+++|++.+.++++.+.... +..++..+++.++.+|..
T Consensus 415 ~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~- 489 (726)
T PRK14501 415 IEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFA----SKPITPAAAEEIIARYRA- 489 (726)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhccc----cccCCccCHHHHHHHHHh-
Confidence 999999999999999999999999999999999999999999999999865543221 122233467788899975
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMP 620 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~p 620 (808)
+++|||+|||||||++...+|+...++++++++|++|+++ |
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d---------------------------------------~ 530 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAAD---------------------------------------P 530 (726)
T ss_pred ccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcC---------------------------------------C
Confidence 6789999999999999876666677888888888887775 6
Q ss_pred CCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeec--CCChhHHHHHHHHHHHHHhhccCCCcEEEecCcE
Q psy2719 621 DVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVH--PVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVL 698 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~ 698 (808)
|+.|+|+|||++..++++++..++++|++||++++.+++. |.. ..+.+|++.++++++.+.++ ++|+++|.|+.+
T Consensus 531 g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~-w~~~~~~~~~w~~~v~~il~~~~~~--~~gs~ie~k~~~ 607 (726)
T PRK14501 531 NTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGE-WQLLEPVATEWKDAVRPILEEFVDR--TPGSFIEEKEAS 607 (726)
T ss_pred CCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCc-eEECCCcchhHHHHHHHHHHHHHhc--CCCcEEEEcceE
Confidence 8999999999999999999866789999999999876543 332 23567999999999999987 899999999999
Q ss_pred EEEEcCcCChhhHHH----HHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe--
Q psy2719 699 LTFHYRETPIERREY----IIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-- 772 (808)
Q Consensus 699 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-- 772 (808)
++|||+.+++++... +...+...+...++.+.+|+.++||+|+ ++|||.|++.+++. . +.+ +++|||
T Consensus 608 l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~-~vnKG~al~~ll~~-~--~~d---~vl~~GD~ 680 (726)
T PRK14501 608 LAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPA-GVNKGRAVRRLLEA-G--PYD---FVLAIGDD 680 (726)
T ss_pred EEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEEC-CCCHHHHHHHHHhc-C--CCC---EEEEECCC
Confidence 999999988766543 3333444444456778889999999998 99999999999983 3 332 899999
Q ss_pred --CHHHHHhccCCccEEEeCCCCccccccccccCcC
Q psy2719 773 --NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 --D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
|++||+.++..+++|+||+. ++.|+|+++++
T Consensus 681 ~nDe~Mf~~~~~~~~~v~vG~~---~s~A~~~l~~~ 713 (726)
T PRK14501 681 TTDEDMFRALPETAITVKVGPG---ESRARYRLPSQ 713 (726)
T ss_pred CChHHHHHhcccCceEEEECCC---CCcceEeCCCH
Confidence 99999999766788999985 58999999875
No 5
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=7.6e-92 Score=780.08 Aligned_cols=384 Identities=36% Similarity=0.647 Sum_probs=348.6
Q ss_pred cccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccCH
Q psy2719 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFNA 182 (808)
Q Consensus 103 ~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~ 182 (808)
+.++.+|+||||+|.... ++++ . .......++|.||+|+++++++||+||||++|||+|||+++...|+.
T Consensus 31 ~l~~~~g~WvGW~g~~~~-------~~~~--~-~~~~~~~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~ 100 (474)
T PRK10117 31 ALKAAGGLWFGWSGETGN-------EDQP--L-KKVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQR 100 (474)
T ss_pred HHHhcCceEEEecCCCCC-------Cccc--c-hhhhcCCceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCH
Confidence 345679999999996421 1110 0 00111247899999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc----------------------
Q psy2719 183 ETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA---------------------- 240 (808)
Q Consensus 183 ~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~---------------------- 240 (808)
++|++|++||++||++|++.++ ++|+||||||||+++|++||+++
T Consensus 101 ~~w~~Y~~VN~~FA~~v~~~~~-------------~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~L 167 (474)
T PRK10117 101 PAWEGYLRVNALLADKLLPLLK-------------DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNAL 167 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhC
Confidence 9999999999999999999875 48999999999999999999986
Q ss_pred ------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc-----h
Q psy2719 241 ------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA-----P 303 (808)
Q Consensus 241 ------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~-----~ 303 (808)
+|+|||||++|++||+++|+++++++...+. .+.++||.++|.++|+|||++.|...+... .
T Consensus 168 P~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~-~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~ 246 (474)
T PRK10117 168 PPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGK-SHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLA 246 (474)
T ss_pred CChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCC-eEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHH
Confidence 9999999999999999999999998765433 467889999999999999999997754321 1
Q ss_pred hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCC
Q psy2719 304 ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFS 382 (808)
Q Consensus 304 ~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g 382 (808)
.+++. +++++|++|||+||+|||.++|+||++||++||++++|++|+||+.|||+++++|++++.+|+++|++||++||
T Consensus 247 ~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg 326 (474)
T PRK10117 247 QLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYG 326 (474)
T ss_pred HHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccC
Confidence 12223 67999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhcc-CCCceEEEcCCCCCccccCceEEECCCCH
Q psy2719 383 KPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQI-REPGVLILSPFAGAGGMMHEALLVNPYEI 461 (808)
Q Consensus 383 ~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~-~~~g~vVlS~~~G~~~~l~~~llvnP~d~ 461 (808)
+.+|.||+|+++.++++++.++|++|||+++||++||||||++||+|||. +.+|++|+|||+|++++|.+|++|||||+
T Consensus 327 ~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~~AllVNP~d~ 406 (474)
T PRK10117 327 QLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDR 406 (474)
T ss_pred CCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhCCCeEECCCCH
Confidence 99999999999999999999999999999999999999999999999998 45899999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHccc
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALD 510 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 510 (808)
+++|+||.+||+||.+||++|++.++++|.++|+.+|+++||.+|....
T Consensus 407 ~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 407 DEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998864
No 6
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=1.1e-89 Score=771.81 Aligned_cols=385 Identities=33% Similarity=0.617 Sum_probs=346.1
Q ss_pred cccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccCHHh
Q psy2719 105 LEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFNAET 184 (808)
Q Consensus 105 ~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~ 184 (808)
+..+|+||||+|....+. + +... .. ......+++|.||+|+++++++||+||||++|||+|||+++...|+.++
T Consensus 38 ~~~~g~Wvgw~g~~~~~~-~--~~~~--~~-~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~ 111 (487)
T TIGR02398 38 DGRAGTWVAWAEHDENSG-E--TFDS--HM-TVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDD 111 (487)
T ss_pred cccceEEEeeCCCCcccc-c--cccc--cc-ccccCCceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHH
Confidence 346799999999632110 0 0000 00 0122346799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc------------------------
Q psy2719 185 WKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA------------------------ 240 (808)
Q Consensus 185 w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~------------------------ 240 (808)
|++|++||++||++|++.++ ++|+||||||||+++|++||++.
T Consensus 112 w~~Y~~vN~~FA~~i~~~~~-------------~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~ 178 (487)
T TIGR02398 112 WQVFLKVNRAFAEAACLEAA-------------EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPW 178 (487)
T ss_pred HHHHHHHHHHHHHHHHHhcC-------------CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCc
Confidence 99999999999999998875 48999999999999999999986
Q ss_pred ----------CCEEEeccHHHHHHHHHHHHHHhCceeecC-------------------CeEEEEcCeEEEEEEeecCcC
Q psy2719 241 ----------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRN-------------------NMLVELAGRTVHVKALPIGIP 291 (808)
Q Consensus 241 ----------~dligf~~~~~~~~fl~~~~~~l~~~~~~~-------------------~~~i~~~gr~~~v~v~p~GID 291 (808)
||+|||||++|++||+++|+++++++.... .+.+.++||.++|.++|+|||
T Consensus 179 r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID 258 (487)
T TIGR02398 179 REQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTD 258 (487)
T ss_pred hHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEec
Confidence 999999999999999999999998765332 123778999999999999999
Q ss_pred ccccchhhcCc------hhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHH
Q psy2719 292 FERFVQLAENA------PENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364 (808)
Q Consensus 292 ~~~f~~~~~~~------~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~ 364 (808)
++.|.+..... ..++++ .++++|++|||+|+.|||+++|+||++||++||+++++++||||+.|+|+++++|+
T Consensus 259 ~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~ 338 (487)
T TIGR02398 259 PERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYD 338 (487)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHH
Confidence 99997754321 122333 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCC
Q psy2719 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFA 444 (808)
Q Consensus 365 ~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~ 444 (808)
+++++|+++|++||++||+.+|+||+++++.++++++.++|++||||++||+|||||||++||||||.+.+||||+|||+
T Consensus 339 ~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa 418 (487)
T TIGR02398 339 ELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA 418 (487)
T ss_pred HHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred CCccccCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 445 GAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 445 G~~~~l~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
|+++++.+|++|||||++++|+||.+||+||.+||++|+++++++|.++|+.+|+++||.+|..
T Consensus 419 Gaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 419 GAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred cchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999965
No 7
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=8.3e-88 Score=759.00 Aligned_cols=388 Identities=46% Similarity=0.841 Sum_probs=304.3
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCC----c
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPD----R 177 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~----~ 177 (808)
++.++.+|+||||+|.....+.+ .+. ........+++|+||||+++++++||+||||++|||+|||.++ .
T Consensus 40 ~l~~~~~~~WvGw~g~~~~~~~~-----~~~-~v~~~~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~ 113 (474)
T PF00982_consen 40 PLLKKRGGIWVGWPGVDVDEEED-----EQD-RVEPRLLDEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDL 113 (474)
T ss_dssp HHHHHH-EEEEEEEEEES-TTS--------E-EEE---ETTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G
T ss_pred HHHhcCCCEEEEeCCCcCccccc-----ccc-chhhhcccCceEEEEEcCHHHHHHHHHhhhhhccCccccccccccccc
Confidence 44556899999999976432110 111 1112345678999999999999999999999999999998654 6
Q ss_pred cccCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc-----------------
Q psy2719 178 AVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA----------------- 240 (808)
Q Consensus 178 ~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~----------------- 240 (808)
..|+.++|++|++||++||++|++.++ ++|+|||||||||++|++||++.
T Consensus 114 ~~~~~~~w~~Y~~vN~~FA~~i~~~~~-------------~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 180 (474)
T PF00982_consen 114 ARFEEEWWEAYKRVNRRFADAIAEVYR-------------PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSE 180 (474)
T ss_dssp ----HHHHHHHHHHHHHHHHHHGGG---------------TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhCc-------------CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHH
Confidence 789999999999999999999998875 49999999999999999999987
Q ss_pred -----------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc-
Q psy2719 241 -----------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA- 302 (808)
Q Consensus 241 -----------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~- 302 (808)
||+||||+++|++||+++|++++++++......+.++||.++|.++|+|||++.|...+.+.
T Consensus 181 ~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~ 260 (474)
T PF00982_consen 181 IFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPE 260 (474)
T ss_dssp HHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S-
T ss_pred HHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChH
Confidence 99999999999999999999999988765532589999999999999999999997754321
Q ss_pred -----hhhhhc-CC-CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q psy2719 303 -----PENLKD-EN-LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVG 375 (808)
Q Consensus 303 -----~~~~~~-~~-~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~ 375 (808)
.+++++ ++ +++|++|||+|+.|||.++|+||++||++||+++++++|+||+.|+|+++++|++++++|+++|+
T Consensus 261 v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~ 340 (474)
T PF00982_consen 261 VQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVG 340 (474)
T ss_dssp --HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHH
Confidence 122333 56 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-ceE
Q psy2719 376 RINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EAL 454 (808)
Q Consensus 376 ~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~~l 454 (808)
+||++||+.+|+||+|+++.++++++.+||++|||+++||++||||||++||+|||.+++|++|+|||+|++++|. +++
T Consensus 341 ~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~al 420 (474)
T PF00982_consen 341 RINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEAAL 420 (474)
T ss_dssp HHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS-E
T ss_pred HHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCccE
Confidence 9999999999999999999999999999999999999999999999999999999998899999999999999998 569
Q ss_pred EECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 455 LVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 455 lvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
+|||||++++|+||.+||+||++||+.|++.++++|.++|+.+|+++||++|++
T Consensus 421 ~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 421 LVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp EE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred EECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999974
No 8
>KOG1050|consensus
Probab=100.00 E-value=5.6e-84 Score=746.99 Aligned_cols=615 Identities=32% Similarity=0.504 Sum_probs=520.1
Q ss_pred ccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCC--CCcc---cc
Q psy2719 106 EITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSM--PDRA---VF 180 (808)
Q Consensus 106 ~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~--~~~~---~~ 180 (808)
+.+..||||.|.. ++++++.+. ....+...+|+||+++++...++|++||+++|||+|||+ +... .|
T Consensus 44 ~~~~~~vg~~~~~-------~~~~~~~~~-~~~~~~~~~~~pv~~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~~~ 115 (732)
T KOG1050|consen 44 EMEVKWVGPLGDE-------LDDSEKEDV-SQELLEEFDSVPVFLDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFKLF 115 (732)
T ss_pred cceeeEEeecccc-------CchhhHhHh-hhhhhhhcCceeeecCCchhhhhhhhhhhhcccceeecccCCCchhhhhh
Confidence 5568899988832 333333222 223455789999999999999999999999999999998 3322 35
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc--------------------
Q psy2719 181 NAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA-------------------- 240 (808)
Q Consensus 181 ~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~-------------------- 240 (808)
+.+.|++|+.+|+.||+++++.++ ++|+|||||||||++|+++|+..
T Consensus 116 ~~~~w~~y~~~n~~f~d~ive~~~-------------~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r 182 (732)
T KOG1050|consen 116 DLELWKAYVKVNQAFADKIVEVYE-------------EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYR 182 (732)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcc-------------CCCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHHHH
Confidence 678999999999999999999986 38999999999999999999874
Q ss_pred --------------CCEEEeccHHHHHHHHHHHHHHhCceeec--CCeEEEEcCeEEEEEEeecCcCccccchhhcCch-
Q psy2719 241 --------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDR--NNMLVELAGRTVHVKALPIGIPFERFVQLAENAP- 303 (808)
Q Consensus 241 --------------~dligf~~~~~~~~fl~~~~~~l~~~~~~--~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~~- 303 (808)
+|+||||+.+|+|||+++|.|+++.+... ....+.+.||.+.|.++|+|||+.+|........
T Consensus 183 ~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~ 262 (732)
T KOG1050|consen 183 CLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYV 262 (732)
T ss_pred hcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhH
Confidence 89999999999999999999999977652 2334788999999999999999999977543311
Q ss_pred -----hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHH
Q psy2719 304 -----ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRI 377 (808)
Q Consensus 304 -----~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~i 377 (808)
++... +++++|++|||+|+.||+..++.||++++++||+++++|+|+|+..|+++++++|++++.++..++.+|
T Consensus 263 ~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rI 342 (732)
T KOG1050|consen 263 GSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRI 342 (732)
T ss_pred HHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhh
Confidence 22222 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc-CceEEE
Q psy2719 378 NGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM-HEALLV 456 (808)
Q Consensus 378 n~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l-~~~llv 456 (808)
|.+||+..+.||+++...++..++.++|..||+++++|+++||||+++|+++|+..+.+++|+|+|+|+.+.+ .+++++
T Consensus 343 n~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivv 422 (732)
T KOG1050|consen 343 NEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVV 422 (732)
T ss_pred hhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEE
Confidence 9999999999999999999999999999999999999999999999999999998778999999999999999 579999
Q ss_pred CCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCCCccchhcccCchhhHHHHhh
Q psy2719 457 NPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLNN 536 (808)
Q Consensus 457 nP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (808)
||||.++++.+|..+|+|+++++..|+....+++..++...|+.+|++.+.+..+.+... . ...++ ...+.++..
T Consensus 423 npw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~~~-~--~~~~~--l~~~~~i~~ 497 (732)
T KOG1050|consen 423 NPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGFLG-F--RVTPL--LTAEHIVSD 497 (732)
T ss_pred CCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcccc-c--ccccc--cChhHhhhh
Confidence 999999999999999999999999999999999999999999999999888876655421 1 12221 133457788
Q ss_pred hhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHH
Q psy2719 537 YVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERL 616 (808)
Q Consensus 537 y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l 616 (808)
|.+ +++|+|++|||||+.+..+ ..+ .+.|+.|
T Consensus 498 y~~-s~~rli~ldyd~t~~~~~~--------~~~---------------------------------------~~~l~~L 529 (732)
T KOG1050|consen 498 YKK-SKKRLILLDYDLTLIPPRS--------IKA---------------------------------------ISILKDL 529 (732)
T ss_pred hhh-ccceEEEecccccccCCCC--------chH---------------------------------------HHHHHHH
Confidence 876 6789999999999887322 112 2346677
Q ss_pred hCCCCCeEEEEeCCChhhHHHhc-CccceEEEcccceeEecCCCceeecCC-ChhHHHHHHHHHHHHHhhccCCCcEEEe
Q psy2719 617 ANMPDVNIGIISGRTLENLMKMV-NIEKVTYAGSHGLEILHPDGTKFVHPV-PKEYAEKLRQLIKALQDEVCHDGAWIEN 694 (808)
Q Consensus 617 ~~~pg~~v~I~SGR~~~~l~~~~-~~~~~~li~~nG~~i~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~~~g~~ie~ 694 (808)
|+||++.|.|+|||+...+.+++ +.++++++||||++++.+++ |.... +.+|++.+++++++|.++ |+|+++|.
T Consensus 530 ~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~~~~~w~~~v~~i~~~~~er--t~GS~ie~ 605 (732)
T KOG1050|consen 530 CSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCVLDLDWKDLVKDIFQYYTER--TPGSYIER 605 (732)
T ss_pred hcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeecccccHHHHHHHHHHHHHhc--CCCceecc
Confidence 88899999999999999998877 57889999999999998876 77665 789999999999999998 99999999
Q ss_pred cCcEEEEEcCcCChhhHHHHHHHHHHHH--HhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe
Q psy2719 695 KGVLLTFHYRETPIERREYIIDRASQIF--LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG 772 (808)
Q Consensus 695 k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G 772 (808)
|+.++.|||+++++++++-....+.+.+ .+.++.+..|+..|||.|. |+|||.|+..++.. .. +. .++++|+|
T Consensus 606 k~~~l~~hy~~ad~~~g~~qA~el~~~l~~~~~~~~v~~g~~~Vev~~~-gvsk~~~~~~~~~~-~~-~~--~df~~c~g 680 (732)
T KOG1050|consen 606 KETALVWHYRNADPEFGELQAKELLEHLESKNEPVEVVRGKHIVEVRPQ-GVSKGLAAERILSE-MV-KE--PDFVLCIG 680 (732)
T ss_pred cCceEEEeeeccCcchhHHHHHHHHHHhcccCCCeEEEecCceEEEccc-ccchHHHHHHHHHh-cC-CC--cceEEEec
Confidence 9999999999999888753333333333 2457889999999999997 99999999999986 55 22 23899999
Q ss_pred ----CHHHHHhccCCc--------cEEEeCCCCccccccccccCcC
Q psy2719 773 ----NEDAMLALQGIA--------CTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 ----D~~Mf~~~~~~~--------~~vav~~~~~vk~~A~~~~~~~ 806 (808)
|++||+.+...- ++++||. -.+.|+|.+.++
T Consensus 681 ~d~tDed~~~~~~~~~~~~~~~~~F~~~~g~---~~t~a~~~~~~~ 723 (732)
T KOG1050|consen 681 DDRTDEDMFEFISKAKDPEKVEEIFACTVGQ---KPSKAKYFLDDT 723 (732)
T ss_pred CCCChHHHHHHHhhccCCcccceEEEEEcCC---CCcccccccCCh
Confidence 999999886321 3344444 348899887653
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.6e-85 Score=719.14 Aligned_cols=385 Identities=43% Similarity=0.762 Sum_probs=346.5
Q ss_pred cccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCcccc
Q psy2719 101 NGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVF 180 (808)
Q Consensus 101 ~g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~ 180 (808)
.+.....+|+||||+|.... +++.++.. ......+...||.++.+++++||++|||++|||+|||+.+...|
T Consensus 51 ~~~~~~~~~~W~gw~G~~~~--~~~~~~~~------~~~~~~~~~~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~~~ 122 (486)
T COG0380 51 KPLLRVDGGTWIGWSGTTGP--TDESSDDL------KERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAY 122 (486)
T ss_pred chhhHhhcceEEecCceecc--ccccchhh------hhccccceEEEEecCHHHHHHHHHHhhHhhhcceeeeecCcccc
Confidence 34555688999999998652 11111111 11222678999999999999999999999999999999988999
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc--------------------
Q psy2719 181 NAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA-------------------- 240 (808)
Q Consensus 181 ~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~-------------------- 240 (808)
+.++|+.|++||++||++|++.++ ++|+||||||||+|+|+|||++.
T Consensus 123 ~~~~w~~Y~~vN~~FAd~i~~~~~-------------~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr 189 (486)
T COG0380 123 ERNWWDAYVKVNRKFADKIVEIYE-------------PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFR 189 (486)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHh
Confidence 999999999999999999999986 49999999999999999999988
Q ss_pred --------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEE---cCeEEEEEEeecCcCccccchhhcCc-
Q psy2719 241 --------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVEL---AGRTVHVKALPIGIPFERFVQLAENA- 302 (808)
Q Consensus 241 --------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~---~gr~~~v~v~p~GID~~~f~~~~~~~- 302 (808)
||+||||+.+|++||+++|+++++..... + +.+ +|+.+++.++|+|||+..|.......
T Consensus 190 ~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~-~--~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~ 266 (486)
T COG0380 190 CLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA-D--IRFNGADGRIVKVGAFPIGIDPEEFERALKSPS 266 (486)
T ss_pred hCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccc-c--ccccccCCceEEEEEEeeecCHHHHHHhhcCCc
Confidence 99999999999999999999999865222 1 333 47999999999999999997754321
Q ss_pred -----hhhhhc--CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q psy2719 303 -----PENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVG 375 (808)
Q Consensus 303 -----~~~~~~--~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~ 375 (808)
.++++. .++++|++|||+|+.||+.++++||++||++||++++|++|+||+.|||++.++|+.++.+++++|+
T Consensus 267 v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~ 346 (486)
T COG0380 267 VQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVG 346 (486)
T ss_pred hhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHH
Confidence 122333 4499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccCceEE
Q psy2719 376 RINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALL 455 (808)
Q Consensus 376 ~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~~~ll 455 (808)
+||++||+.+|+||+|++..++++++.+||++||++++||++||||||++||+|||..++|++|+|||+|++.+|.++++
T Consensus 347 rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~Ali 426 (486)
T COG0380 347 RINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRDALI 426 (486)
T ss_pred HHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhccCEe
Confidence 99999999999999999999999999999999999999999999999999999999977999999999999999999999
Q ss_pred ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 456 VNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 456 vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
|||||.+++|++|.+||+|+.+||++|++.+++.|.++|+++|+++|+.+|...
T Consensus 427 VNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 427 VNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred ECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999863
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=4.5e-82 Score=715.63 Aligned_cols=384 Identities=46% Similarity=0.793 Sum_probs=346.8
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccC
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFN 181 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~ 181 (808)
++..+.+|+||||+|..... ++++.. .......+++|+||||+++++++||+||||++|||+|||+++...|+
T Consensus 31 ~~~~~~~~~Wvgw~g~~~~~------~~~~~~-~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H~~~~~~~~~ 103 (456)
T TIGR02400 31 GALKATGGVWFGWSGKTVEE------DEGEPF-LRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYD 103 (456)
T ss_pred HHHhccCcEEEEeCCCCCCc------cchhhh-HHHhhccCceEEEEECCHHHHHHHHHHhhhhhcchhhcccccccccC
Confidence 34456789999999974311 111000 11122346899999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc---------------------
Q psy2719 182 AETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA--------------------- 240 (808)
Q Consensus 182 ~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~--------------------- 240 (808)
+++|++|++||++||++|++.++ ++|+||||||||+++|++||++.
T Consensus 104 ~~~w~~Y~~vN~~fA~~i~~~~~-------------~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~ 170 (456)
T TIGR02400 104 RKAWEAYRRVNRLFAEALAPLLQ-------------PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRT 170 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-------------CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhh
Confidence 99999999999999999999875 48999999999999999999986
Q ss_pred -------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc-----
Q psy2719 241 -------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA----- 302 (808)
Q Consensus 241 -------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~----- 302 (808)
||+|||||++|++||+++|+++++.+..... +.+.|+.++|.++|+|||++.|.+.....
T Consensus 171 lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~--~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~ 248 (456)
T TIGR02400 171 LPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNG--VESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKR 248 (456)
T ss_pred CCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCc--eEECCcEEEEEEecCcCCHHHHHHHhcChhHHHH
Confidence 9999999999999999999999998876654 66889999999999999999998754321
Q ss_pred -hhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcc
Q psy2719 303 -PENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGR 380 (808)
Q Consensus 303 -~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~ 380 (808)
..++++ .++++|++|||+++.||++.+|+||++|++++|+++++++|+|++.|+++++++|+++++++++++++||++
T Consensus 249 ~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~ 328 (456)
T TIGR02400 249 IAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGR 328 (456)
T ss_pred HHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhc
Confidence 112223 678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccCceEEECCCC
Q psy2719 381 FSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYE 460 (808)
Q Consensus 381 ~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~~~llvnP~d 460 (808)
||+.+|.|++++.+.+++++++++|++||+||+||++||||||++|||||+.|.+|++|+|+++|+++++.+|++|||+|
T Consensus 329 ~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~~gllVnP~d 408 (456)
T TIGR02400 329 FGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELNGALLVNPYD 408 (456)
T ss_pred cCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhCCcEEECCCC
Confidence 99999999999999999999999999999999999999999999999999998889999999999999998999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
++++|+||.++|+|+.+||++|++++++++.++|+.+|+++|+.+|.
T Consensus 409 ~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 409 IDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999885
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=1.1e-73 Score=652.37 Aligned_cols=384 Identities=49% Similarity=0.880 Sum_probs=344.2
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccC
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFN 181 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~ 181 (808)
++.++.+++||||+|....... + .........+++|+||||+++++++||+||||++|||+|||.++...|+
T Consensus 36 ~~~~~~~~~wvg~~~~~~~~~~------~--~~~~~~~~~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~ 107 (460)
T cd03788 36 GLLKRTGGLWVGWSGIEEDEEE------E--DEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFD 107 (460)
T ss_pred HHHhcCCeEEEEeCCCCCCccc------c--hhhhhhhcCCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccC
Confidence 3445568999999997532111 0 0012234567899999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc---------------------
Q psy2719 182 AETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA--------------------- 240 (808)
Q Consensus 182 ~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~--------------------- 240 (808)
.++|++|++||+.||++|++.++ ++|+||||||||+++|.++|++.
T Consensus 108 ~~~w~~Y~~vN~~fa~~i~~~~~-------------~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~~~~ 174 (460)
T cd03788 108 REDWEAYVRVNRKFADAIAEVLR-------------PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRC 174 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhh
Confidence 99999999999999999999875 48999999999999999999864
Q ss_pred -------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCch---h
Q psy2719 241 -------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAP---E 304 (808)
Q Consensus 241 -------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~~---~ 304 (808)
+|+||||+++|+++|+++|+++++.+..... .+.++|+.+++.++|+|||++.|.+...... .
T Consensus 175 lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~-~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~ 253 (460)
T cd03788 175 LPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG-GVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQER 253 (460)
T ss_pred CCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCc-eEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHH
Confidence 9999999999999999999999987655432 5789999999999999999999986543211 1
Q ss_pred ---hhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcc
Q psy2719 305 ---NLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGR 380 (808)
Q Consensus 305 ---~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~ 380 (808)
.+.. +++++|++|||+++.||+..+|+||++|++++|+++++++|+|+|.|+++++++++++++++++++++||.+
T Consensus 254 ~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~ 333 (460)
T cd03788 254 AAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGK 333 (460)
T ss_pred HHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhc
Confidence 1122 678999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred CCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccCceEEECCCC
Q psy2719 381 FSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYE 460 (808)
Q Consensus 381 ~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~~~llvnP~d 460 (808)
||+.+|.+|+++.+.++++++.++|++||+||+||++||||||++|||||++|.+|+||+|+++|+++++.+|++|||+|
T Consensus 334 ~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~~~~g~lv~p~d 413 (460)
T cd03788 334 FGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEELSGALLVNPYD 413 (460)
T ss_pred cCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhhcCCCEEECCCC
Confidence 99989999999999999999999999999999999999999999999999999999999999999999887899999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
++++|++|.++|+|++++++.+++++++++.++|+..|+++|+.+|.
T Consensus 414 ~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l~ 460 (460)
T cd03788 414 IDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460 (460)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999873
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.7e-34 Score=343.79 Aligned_cols=435 Identities=14% Similarity=0.182 Sum_probs=277.7
Q ss_pred EEEEeecCcCccccchhhcCch-------------------hhhh---cCCCeEEEEEcCccccCChHHHHHHHHHHHHh
Q psy2719 282 HVKALPIGIPFERFVQLAENAP-------------------ENLK---DENLKVILGVDRLDYTKGLVHRIKAFERLLEK 339 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~~~-------------------~~~~---~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~ 339 (808)
++.|||+|||+++|.+...... .+.+ .+++++|++|||+++.||+..+|+||..+.+.
T Consensus 428 ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l 507 (1050)
T TIGR02468 428 RMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPL 507 (1050)
T ss_pred CeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhh
Confidence 8899999999999987421100 1111 15778999999999999999999999998654
Q ss_pred CCCccCcEEEEEEEcCCCCChHHH----HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhc----CeE
Q psy2719 340 HPEYVEKVTFLQISVPSRTDVLEY----KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDS----AIA 411 (808)
Q Consensus 340 ~p~~~~~v~lv~ig~~~~~~~~~~----~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~A----dv~ 411 (808)
.+.. ++.+ ++|.+. +.++. .....++.+++.+.+. ...+.|.|.+++++++++|+.| |+|
T Consensus 508 ~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li~~lgL-------~g~V~FlG~v~~edvp~lYr~Ad~s~DVF 575 (1050)
T TIGR02468 508 RELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLIDKYDL-------YGQVAYPKHHKQSDVPDIYRLAAKTKGVF 575 (1050)
T ss_pred ccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHHHHhCC-------CCeEEecCCCCHHHHHHHHHHhhhcCCee
Confidence 3221 2333 345321 11111 1234556666666543 2345677999999999999998 699
Q ss_pred EECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q psy2719 412 LVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRH 488 (808)
Q Consensus 412 v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~ 488 (808)
|+||++||||++++|||||+ .|||+|+.+|..+.+. +|++|+|.|++++|++|.++|+. ++.+++...+.++
T Consensus 576 V~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~ 650 (1050)
T TIGR02468 576 INPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLK 650 (1050)
T ss_pred eCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHH
Confidence 99999999999999999996 5699999988888773 59999999999999999999974 4555666667788
Q ss_pred HHhcCCHHHHHHHHHHHHHcccccCCCCC--------cc----ch---------hcccCch-------------------
Q psy2719 489 REQQLDVNHWMNSFLSSMGALDNDDDSDP--------LS----AK---------TLQLTLD------------------- 528 (808)
Q Consensus 489 ~v~~~~~~~W~~~~l~~l~~~~~~~~~~~--------~~----~~---------~~~~~~~------------------- 528 (808)
++.+|+|...++++++.+......+..-. .+ .. +..++++
T Consensus 651 ~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1050)
T TIGR02468 651 NIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPA 730 (1050)
T ss_pred HHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchh
Confidence 88999999999999998876533221000 00 00 0000000
Q ss_pred -hhHHHH-----------------------hhhhc-CCCceEEE--EecccccccCCCCCCccCCCHHHHHHHHHHhcCC
Q psy2719 529 -DFDLYL-----------------------NNYVD-GNCKLSLI--LDYDGTLTPLTSHPDLAVMSEETKRVLERLANMP 581 (808)
Q Consensus 529 -~~~~~~-----------------------~~y~~-~~~~rli~--~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~ 581 (808)
....+. ..|.. ...+++|+ +|+|+| +. ..+.++++++.+.+..
T Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~---------~~~~l~~~~~~~~~~~ 800 (1050)
T TIGR02468 731 DRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD---------LLQIIKNIFEAVRKER 800 (1050)
T ss_pred hHHHHHHHHHhhccccccccccccccccccccCccccccceEEEEEeccCCC-CC---------hHHHHHHHHHHHhccc
Confidence 000000 01100 11245556 899999 22 1233333344443210
Q ss_pred CCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhc---Ccc---ceEEEcccceeEe
Q psy2719 582 DVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMV---NIE---KVTYAGSHGLEIL 655 (808)
Q Consensus 582 ~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~---~~~---~~~li~~nG~~i~ 655 (808)
. -..+.++++|||++..+.+.+ +++ ++.+||.-|+.|+
T Consensus 801 ----------~--------------------------~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIy 844 (1050)
T TIGR02468 801 ----------M--------------------------EGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELY 844 (1050)
T ss_pred ----------c--------------------------CCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCccee
Confidence 0 014789999999999988876 333 4689999999998
Q ss_pred cCC------Cc-----eeecCCChhH-HHHHHHHHHHHHhh----c--cCCCcEEEec----CcEEEEEcCcCChhhHHH
Q psy2719 656 HPD------GT-----KFVHPVPKEY-AEKLRQLIKALQDE----V--CHDGAWIENK----GVLLTFHYRETPIERREY 713 (808)
Q Consensus 656 ~~~------~~-----~~~~~~~~~~-~~~v~~i~~~~~~~----~--~~~g~~ie~k----~~~~~~~~~~~~~~~~~~ 713 (808)
.+. .. .|...+...| .+.+++.+..+... . ..++...+.. .+++++...+.+. ..
T Consensus 845 y~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~---~~ 921 (1050)
T TIGR02468 845 YPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSK---VP 921 (1050)
T ss_pred ccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCccc---Cc
Confidence 862 11 1334455566 44456555443321 0 1123344332 3455554222221 12
Q ss_pred HHHHHHHHHHhcCe--eE-E-ccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeE-EEEe-----C-HHHHHhccC
Q psy2719 714 IIDRASQIFLEAGF--EP-H-NALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRI-IYAG-----N-EDAMLALQG 782 (808)
Q Consensus 714 ~~~~~~~~~~~~~~--~v-~-~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~v-ia~G-----D-~~Mf~~~~~ 782 (808)
.++.+++.+...++ ++ . .+..+++|.|. .+|||.||++|..+ +|++.+ .+ ++.| | ++|+.-+
T Consensus 922 ~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~-~ASKgqAlRyL~~r-wgi~l~---~v~VfaGdSGntD~e~Ll~G~-- 994 (1050)
T TIGR02468 922 PVKELRKLLRIQGLRCHAVYCRNGTRLNVIPL-LASRSQALRYLFVR-WGIELA---NMAVFVGESGDTDYEGLLGGL-- 994 (1050)
T ss_pred cHHHHHHHHHhCCCceEEEeecCCcEeeeeeC-CCCHHHHHHHHHHH-cCCChH---HeEEEeccCCCCCHHHHhCCc--
Confidence 24666777766554 33 3 34589999997 99999999999987 999986 55 5588 5 5565443
Q ss_pred CccEEEeC
Q psy2719 783 IACTFRVD 790 (808)
Q Consensus 783 ~~~~vav~ 790 (808)
-.||-+.
T Consensus 995 -~~tvi~~ 1001 (1050)
T TIGR02468 995 -HKTVILK 1001 (1050)
T ss_pred -eeEEEEe
Confidence 2345554
No 13
>PLN02580 trehalose-phosphatase
Probab=99.97 E-value=7.7e-30 Score=277.44 Aligned_cols=232 Identities=26% Similarity=0.480 Sum_probs=184.0
Q ss_pred hHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHH
Q psy2719 530 FDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEET 609 (808)
Q Consensus 530 ~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~ 609 (808)
|+.+ .+|.+ ++++++||||||||+++..+|+...++++++++|++|++.
T Consensus 108 ~~~~-~~~~~-~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~----------------------------- 156 (384)
T PLN02580 108 FEQI-ANFAK-GKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY----------------------------- 156 (384)
T ss_pred HHHH-HHHhh-cCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----------------------------
Confidence 4443 45655 5788999999999999999999999999999999999876
Q ss_pred HHHHHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCc------------------eee-cCCChhH
Q psy2719 610 KRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGT------------------KFV-HPVPKEY 670 (808)
Q Consensus 610 ~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~------------------~~~-~~~~~~~ 670 (808)
..|+|+|||++..|.++++..+++++++||++++.+.+. .+. .....+|
T Consensus 157 ------------~~VAIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~ 224 (384)
T PLN02580 157 ------------FPTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEF 224 (384)
T ss_pred ------------CCEEEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccccccccccccccccccchhh
Confidence 359999999999999999988899999999999864221 111 1113567
Q ss_pred HHHHHHHHHHHHhhc-cCCCcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhc-CeeEEccCeEEEEeCCCCCCHHH
Q psy2719 671 AEKLRQLIKALQDEV-CHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEA-GFEPHNALMAIEAKPPVKWDQGR 748 (808)
Q Consensus 671 ~~~v~~i~~~~~~~~-~~~g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~vEv~p~~~v~KG~ 748 (808)
.+.+.++++.+.+.. .++|+++|+|+++++||||.+++++.+.+.+.+++.+.++ ++.+..|++++||+|+.++|||.
T Consensus 225 ~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~ 304 (384)
T PLN02580 225 LPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGK 304 (384)
T ss_pred hhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCCCCCHHH
Confidence 777778877766543 4799999999999999999998776666667777776666 48889999999999833999999
Q ss_pred HHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccC--CccEEEeCCCCccccccccccCcC
Q psy2719 749 ASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQG--IACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 749 av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~--~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
||++|+++ ++++..+...++||| |++||+++++ .|++|+|++.+ -.+.|+|.+++.
T Consensus 305 Av~~Ll~~-~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~-~~t~A~y~L~dp 366 (384)
T PLN02580 305 AVEFLLES-LGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVP-KESNAFYSLRDP 366 (384)
T ss_pred HHHHHHHh-cCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCC-CCccceEEcCCH
Confidence 99999996 888753211359999 9999999764 37789999732 146899988753
No 14
>PLN03017 trehalose-phosphatase
Probab=99.97 E-value=1.5e-29 Score=272.66 Aligned_cols=234 Identities=24% Similarity=0.431 Sum_probs=184.5
Q ss_pred chhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccch
Q psy2719 527 LDDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMS 606 (808)
Q Consensus 527 ~~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~ 606 (808)
++.|+.+++.+. .++++||+||||||+++.++|+...++++++++|++|+ +
T Consensus 97 l~~~~~~~~~~~--~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~-------------------------- 147 (366)
T PLN03017 97 LEMFEQIMEASR--GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K-------------------------- 147 (366)
T ss_pred HHHHHHHHHHhc--CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c--------------------------
Confidence 345566655443 46789999999999999888877789999999999998 4
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceee---------cCCChhHHHHHHHH
Q psy2719 607 EETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFV---------HPVPKEYAEKLRQL 677 (808)
Q Consensus 607 ~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~---------~~~~~~~~~~v~~i 677 (808)
++.|+|+|||++..+.++++..+++++++||++++.+++.... .....+|.+.+.++
T Consensus 148 --------------~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 213 (366)
T PLN03017 148 --------------CFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEV 213 (366)
T ss_pred --------------CCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHH
Confidence 6789999999999999998877789999999999876432110 11224577777777
Q ss_pred HHHHHhhc-cCCCcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhc-CeeEEccCeEEEEeCCCCCCHHHHHHHHHH
Q psy2719 678 IKALQDEV-CHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEA-GFEPHNALMAIEAKPPVKWDQGRASIHILR 755 (808)
Q Consensus 678 ~~~~~~~~-~~~g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~vEv~p~~~v~KG~av~~ll~ 755 (808)
++.+.+.. .++|+++|+|+++++||||.+++....++...+...+.++ ++.+..|++.+||+|+.++|||.|+++|++
T Consensus 214 ~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~ 293 (366)
T PLN03017 214 YRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLE 293 (366)
T ss_pred HHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHH
Confidence 55544332 3899999999999999999998765556667777777776 488999999999999559999999999999
Q ss_pred HhcCCCCCcceeEEEEe----CHHHHHhccC--CccEEEeCCCCccccccccccCc
Q psy2719 756 TMYGVDWSERVRIIYAG----NEDAMLALQG--IACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 756 ~~~~i~~~~~~~via~G----D~~Mf~~~~~--~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
. +++...+...++|+| ||+||+++++ .|++|.|+..+. .+.|+|.+++
T Consensus 294 ~-l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k-~T~A~y~L~d 347 (366)
T PLN03017 294 S-LGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK-DTDASYSLQD 347 (366)
T ss_pred h-cccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC-CCcceEeCCC
Confidence 6 776533223699999 9999999964 468899995321 4889998875
No 15
>PLN02151 trehalose-phosphatase
Probab=99.97 E-value=2.7e-29 Score=270.00 Aligned_cols=233 Identities=25% Similarity=0.437 Sum_probs=184.3
Q ss_pred hhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchH
Q psy2719 528 DDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSE 607 (808)
Q Consensus 528 ~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~ 607 (808)
+.|++++... .+++++||+||||||+++..+|+...++++++++|++|++.
T Consensus 85 ~~~~~~~~~~--~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~--------------------------- 135 (354)
T PLN02151 85 NMFEEILHKS--EGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC--------------------------- 135 (354)
T ss_pred HHHHHHHHhh--cCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC---------------------------
Confidence 3455555542 25678999999999999999999889999999999999853
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCC-ceee-------cCCChhHHHHHHHHHH
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDG-TKFV-------HPVPKEYAEKLRQLIK 679 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~-~~~~-------~~~~~~~~~~v~~i~~ 679 (808)
..|+|+|||+...+.++++.++++++++||++++.+++ ..|. .....+|.+.+.++++
T Consensus 136 --------------~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~ 201 (354)
T PLN02151 136 --------------FPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYK 201 (354)
T ss_pred --------------CCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccchhhHHHHHHHHH
Confidence 57999999999999999998889999999999987643 2231 2234568888888887
Q ss_pred HHHhhc-cCCCcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhc-CeeEEccCeEEEEeCCCCCCHHHHHHHHHHHh
Q psy2719 680 ALQDEV-CHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEA-GFEPHNALMAIEAKPPVKWDQGRASIHILRTM 757 (808)
Q Consensus 680 ~~~~~~-~~~g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~ 757 (808)
.+.+.. .++|+++|+|+++++||||.++++...++...+.+.+.++ ++.+..|++++||+|+.++|||.||++|++.
T Consensus 202 ~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~- 280 (354)
T PLN02151 202 KLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLES- 280 (354)
T ss_pred HHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHh-
Confidence 776432 4899999999999999999998764455666677777666 4889999999999995599999999999996
Q ss_pred cCCCCCcceeEEEEe----CHHHHHhccC--CccEEEeCCCCccccccccccCc
Q psy2719 758 YGVDWSERVRIIYAG----NEDAMLALQG--IACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 758 ~~i~~~~~~~via~G----D~~Mf~~~~~--~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
+++.....++++|+| ||+||++++. .|+++.|+..+ -.+.|+|.+++
T Consensus 281 ~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~-k~T~A~y~L~d 333 (354)
T PLN02151 281 LGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYA-KETNASYSLQE 333 (354)
T ss_pred cccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCC-CCCcceEeCCC
Confidence 665532223689999 9999999863 36778887421 13789998875
No 16
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.97 E-value=4.4e-30 Score=268.36 Aligned_cols=216 Identities=29% Similarity=0.519 Sum_probs=142.0
Q ss_pred EEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeEEE
Q psy2719 547 ILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIGI 626 (808)
Q Consensus 547 ~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~I 626 (808)
||||||||.++..+|+...++++++++|++|+++ |++.|+|
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---------------------------------------~~~~v~I 41 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---------------------------------------PNNTVAI 41 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHH---------------------------------------SE--EEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhcc---------------------------------------CCCEEEE
Confidence 7999999999988887778888887777777665 6889999
Q ss_pred EeCCChhhHHHhcCccceEEEcccceeEecCCCceeec---CCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEEEc
Q psy2719 627 ISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVH---PVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHY 703 (808)
Q Consensus 627 ~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~---~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~~~ 703 (808)
+|||+...+..++++++++++++||++++.+++..|.. ....+|++.+.++++.+.++ ++|+++|.|+++++|||
T Consensus 42 vSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~pG~~iE~K~~sv~~Hy 119 (235)
T PF02358_consen 42 VSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEYFAER--TPGSFIEDKEFSVAFHY 119 (235)
T ss_dssp E-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTTHHHH--STT-EEEEETTEEEEE-
T ss_pred EEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHHHHhh--ccCcEEEECCeEEEEEe
Confidence 99999999888888889999999999999988766653 34457999999999999887 99999999999999999
Q ss_pred CcCChhhH----HHHHHHHHHHHHhc-CeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CH
Q psy2719 704 RETPIERR----EYIIDRASQIFLEA-GFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NE 774 (808)
Q Consensus 704 ~~~~~~~~----~~~~~~~~~~~~~~-~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~ 774 (808)
|.+++++. .++.+++.+..... ++++..|+++|||+|+ +++||.|++.|+++ ++......+.++|+| ||
T Consensus 120 r~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~-~~~KG~av~~ll~~-~~~~~~~~~~~l~~GDD~tDE 197 (235)
T PF02358_consen 120 RNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPP-GVNKGSAVRRLLEE-LPFAGPKPDFVLYIGDDRTDE 197 (235)
T ss_dssp TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-T-T--HHHHHHHHHTT-S---------EEEEESSHHHH
T ss_pred cCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeC-CCChHHHHHHHHHh-cCccccccceeEEecCCCCCH
Confidence 99988743 35556666666554 8999999999999998 99999999999996 554311123799999 99
Q ss_pred HHHHhccCC---ccEEEeCC--CCccccccccccCc
Q psy2719 775 DAMLALQGI---ACTFRVDS--SPTVKSSWKQGSNH 805 (808)
Q Consensus 775 ~Mf~~~~~~---~~~vav~~--~~~vk~~A~~~~~~ 805 (808)
+||+++++. |+++.|+. ..+.++.|+|.+++
T Consensus 198 ~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 198 DAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp HHHHTTTTS----EEEEES-----------------
T ss_pred HHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 999999986 88999996 35778999999875
No 17
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.9e-28 Score=251.27 Aligned_cols=212 Identities=27% Similarity=0.462 Sum_probs=172.5
Q ss_pred HHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHH
Q psy2719 532 LYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKR 611 (808)
Q Consensus 532 ~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~ 611 (808)
.++..|.. +++++||+||||||+++..+|....++++++++|++|+++
T Consensus 8 ~~~~~~~~-a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~------------------------------- 55 (266)
T COG1877 8 QLLEPYLN-ARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD------------------------------- 55 (266)
T ss_pred hhcccccc-ccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhc-------------------------------
Confidence 34566655 6788999999999999999998888999999988888877
Q ss_pred HHHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeecC---CChhHHHHHHHHHHHHHhhccCC
Q psy2719 612 VLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHP---VPKEYAEKLRQLIKALQDEVCHD 688 (808)
Q Consensus 612 ~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~~---~~~~~~~~v~~i~~~~~~~~~~~ 688 (808)
+++.|+|+|||+..+++.+++.++++++|+||++++.+.+..|... ....|.+.+.++++++.++ +|
T Consensus 56 --------~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r--~p 125 (266)
T COG1877 56 --------PRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVER--TP 125 (266)
T ss_pred --------CCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhc--CC
Confidence 5789999999999999999999999999999999988877665533 3345777999999999998 99
Q ss_pred CcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcC-eeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCccee
Q psy2719 689 GAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEAG-FEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVR 767 (808)
Q Consensus 689 g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~ 767 (808)
|+++|.|++++.||||+++++..............+.. +++..|++.||++|+ ++|||.+++.++++ ...+. ..
T Consensus 126 Gs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~-~~~KG~a~~~i~~~-~~~~~---~~ 200 (266)
T COG1877 126 GSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPP-GVSKGAAIKYIMDE-LPFDG---RF 200 (266)
T ss_pred CeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeC-CcchHHHHHHHHhc-CCCCC---Cc
Confidence 99999999999999999987544322211122222233 889999999999998 99999999999986 54442 16
Q ss_pred EEEEe----CHHHHHhccCC-ccEEEeC
Q psy2719 768 IIYAG----NEDAMLALQGI-ACTFRVD 790 (808)
Q Consensus 768 via~G----D~~Mf~~~~~~-~~~vav~ 790 (808)
++|.| |++||+++++. ++++.|+
T Consensus 201 ~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 201 PIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred ceecCCCCccHHHHHhhccCCCceEEec
Confidence 99999 99999999842 4567776
No 18
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.96 E-value=8.1e-28 Score=255.06 Aligned_cols=213 Identities=21% Similarity=0.314 Sum_probs=170.5
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
++++||+||||||++...+|+.+.++++++++|++|+++ +|
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---------------------------------------~g 53 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---------------------------------------ND 53 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---------------------------------------CC
Confidence 468999999999999888888889999999999999875 48
Q ss_pred CeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEE
Q psy2719 622 VNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTF 701 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~ 701 (808)
+.|+|+|||+...+.++++..++.++++||+++++.++..+...++.++...+.+.++.+.++ ++|+++|.|+.++.+
T Consensus 54 ~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~~--~pg~~ve~k~~~~~~ 131 (266)
T PRK10187 54 GALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALAQ--LPGAELEAKGMAFAL 131 (266)
T ss_pred CcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhcc--CCCcEEEeCCcEEEE
Confidence 999999999999999999765678999999999876555445667777666565555555544 889999999999999
Q ss_pred EcCcCChhhHHHHHHHHH-HHHHhcC-eeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHH
Q psy2719 702 HYRETPIERREYIIDRAS-QIFLEAG-FEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NED 775 (808)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~ 775 (808)
||+.++.+ .+.+..+. .+.+.++ +.+.+|+.++||+|+ ++|||.||++++++ +|++.+ +++||| |++
T Consensus 132 h~r~~~~~--~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~-g~~Kg~al~~ll~~-~~~~~~---~v~~~GD~~nD~~ 204 (266)
T PRK10187 132 HYRQAPQH--EDALLALAQRITQIWPQLALQPGKCVVEIKPR-GTNKGEAIAAFMQE-APFAGR---TPVFVGDDLTDEA 204 (266)
T ss_pred ECCCCCcc--HHHHHHHHHHHHhhCCceEEeCCCEEEEeeCC-CCCHHHHHHHHHHh-cCCCCC---eEEEEcCCccHHH
Confidence 99887432 22333333 3333444 567789999999998 99999999999997 888764 799999 999
Q ss_pred HHHhcc-CCccEEEeCCCCccccccccccCc
Q psy2719 776 AMLALQ-GIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 776 Mf~~~~-~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
||+.+. ..|++|+|++.. +.|+|++++
T Consensus 205 mf~~~~~~~g~~vavg~a~---~~A~~~l~~ 232 (266)
T PRK10187 205 GFAVVNRLGGISVKVGTGA---TQASWRLAG 232 (266)
T ss_pred HHHHHHhcCCeEEEECCCC---CcCeEeCCC
Confidence 999993 135779999864 668888875
No 19
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.96 E-value=1.8e-27 Score=250.04 Aligned_cols=217 Identities=26% Similarity=0.365 Sum_probs=170.2
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMP 620 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~p 620 (808)
+++++|+|||||||++...+|+...++++++++|++|.++ |
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---------------------------------------~ 41 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---------------------------------------P 41 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---------------------------------------C
Confidence 3578999999999999888788788888888888888776 6
Q ss_pred CCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCc-eeecCCC---hhHHHHHHHHHHHHHhhccCCCcEEEecC
Q psy2719 621 DVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGT-KFVHPVP---KEYAEKLRQLIKALQDEVCHDGAWIENKG 696 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~-~~~~~~~---~~~~~~v~~i~~~~~~~~~~~g~~ie~k~ 696 (808)
++.|+|+|||+...+...+..++++++++||++++.++.. .|. ..+ ..|++.+.++.+++.++ +|+++|.|+
T Consensus 42 ~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~---pG~~iE~K~ 117 (244)
T TIGR00685 42 HNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDNGSCQDWV-NLTEKIPSWKVRANELREEITTR---PGVFIERKG 117 (244)
T ss_pred CCeEEEEECCChhhccccCCCCceeEEeecCEEEecCCCcceee-echhhhhhHHHHHHHHHHHHhcC---CCcEEEecc
Confidence 7889999999988887777777889999999999864332 232 222 36888888899988874 899999999
Q ss_pred cEEEEEcCcC-ChhhHHH-HHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe--
Q psy2719 697 VLLTFHYRET-PIERREY-IIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-- 772 (808)
Q Consensus 697 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-- 772 (808)
.+++||||.+ +++.... +.+.+..+....++.+..|+.++|++|+ ++|||.+++.++++ ++++.. .+++||
T Consensus 118 ~s~~~hyr~a~d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~-~~~Kg~a~~~~~~~-~~~~~~---~~i~iGD~ 192 (244)
T TIGR00685 118 VALAWHYRQAPVPELARFRAKELKEKILSFTDLEVMDGKAVVELKPR-FVNKGEIVKRLLWH-QPGSGI---SPVYLGDD 192 (244)
T ss_pred eEEEEEeccCCCcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeC-CCCHHHHHHHHHHh-cccCCC---ceEEEcCC
Confidence 9999999998 4444322 1222223333347888999999999998 99999999999997 787654 799999
Q ss_pred --CHHHHHhcc----C-CccEEEeCCCCccccccccccCcC
Q psy2719 773 --NEDAMLALQ----G-IACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 --D~~Mf~~~~----~-~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
|++||+.+. + .+++++|+ ....++.|+|++++.
T Consensus 193 ~~D~~~~~~~~~~~~~~g~~~v~v~-~g~~~~~A~~~~~~~ 232 (244)
T TIGR00685 193 ITDEDAFRVVNNQWGNYGFYPVPIG-SGSKKTVAKFHLTGP 232 (244)
T ss_pred CcHHHHHHHHhcccCCCCeEEEEEe-cCCcCCCceEeCCCH
Confidence 999999992 1 24678886 334678899998864
No 20
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.91 E-value=7.9e-24 Score=225.30 Aligned_cols=208 Identities=18% Similarity=0.251 Sum_probs=143.3
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|++|+||||++ ++..++++++++|++++++ |+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~~~~~----------------------------------------g~ 37 (264)
T COG0561 3 IKLLAFDLDGTLLD-----SNKTISPETKEALARLREK----------------------------------------GV 37 (264)
T ss_pred eeEEEEcCCCCccC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 47999999999999 4456999999999999988 99
Q ss_pred eEEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcE--
Q psy2719 623 NIGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVL-- 698 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~-- 698 (808)
.|+|+|||++..+.+.+... ..++|++||++++.+++..+..+++.+ .+..+++...+.......+.......
T Consensus 38 ~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 114 (264)
T COG0561 38 KVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSRE---DVEELLELLEDFQGIALVLYTDDGIYLT 114 (264)
T ss_pred EEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHH---HHHHHHHHHHhccCceEEEEeccceeec
Confidence 99999999999988887422 237999999999998555667788775 55666666543200111111100000
Q ss_pred ----------EE-----EEcCcCCh---------hhHHHHHHHHHHHHH-hc---CeeEEccC-eEEEEeCCCCCCHHHH
Q psy2719 699 ----------LT-----FHYRETPI---------ERREYIIDRASQIFL-EA---GFEPHNAL-MAIEAKPPVKWDQGRA 749 (808)
Q Consensus 699 ----------~~-----~~~~~~~~---------~~~~~~~~~~~~~~~-~~---~~~v~~g~-~~vEv~p~~~v~KG~a 749 (808)
.. +.....+. ....+...++.+.+. .+ .+.+.++. .++||+|+ |+|||.|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~-g~~K~~a 193 (264)
T COG0561 115 KKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPK-GVSKGYA 193 (264)
T ss_pred cCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecC-CCchHHH
Confidence 00 00000000 000112222322222 22 34455444 45999998 9999999
Q ss_pred HHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 750 SIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 750 v~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+++|+++ +|++.+ +||||| |++||+.++ ++|||+| .+++|+.|++++.++
T Consensus 194 l~~l~~~-lgi~~~---~v~afGD~~ND~~Ml~~ag---~gvam~Na~~~~k~~A~~vt~~n 248 (264)
T COG0561 194 LQRLAKL-LGIKLE---EVIAFGDSTNDIEMLEVAG---LGVAMGNADEELKELADYVTTSN 248 (264)
T ss_pred HHHHHHH-hCCCHH---HeEEeCCccccHHHHHhcC---eeeeccCCCHHHHhhCCcccCCc
Confidence 9999996 899864 799999 999999884 5599998 589999999998875
No 21
>PRK14099 glycogen synthase; Provisional
Probab=99.91 E-value=3.7e-23 Score=237.86 Aligned_cols=202 Identities=15% Similarity=0.158 Sum_probs=147.0
Q ss_pred eEEEEEEeecCcCccccchhhcCc-----------------hhhhhc------CCCeEEEEEcCccccCChHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA-----------------PENLKD------ENLKVILGVDRLDYTKGLVHRIKAFER 335 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~-----------------~~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~ 335 (808)
+..++.+||||||++.|.+..... ..++++ .+.++|++|||+.+.||++.+++|+++
T Consensus 240 ~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~ 319 (485)
T PRK14099 240 RADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPT 319 (485)
T ss_pred hCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHH
Confidence 356899999999999997643210 112222 246788899999999999999999999
Q ss_pred HHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHH-HhcCeEEEC
Q psy2719 336 LLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALY-RDSAIALVT 414 (808)
Q Consensus 336 ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly-~~Adv~v~~ 414 (808)
++++ .+.|+++|.+. .++++++++++.+... .++++.|. ++++..+| +.||+||+|
T Consensus 320 l~~~------~~~lvivG~G~-------~~~~~~l~~l~~~~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~P 376 (485)
T PRK14099 320 LLGE------GAQLALLGSGD-------AELEARFRAAAQAYPG--------QIGVVIGY--DEALAHLIQAGADALLVP 376 (485)
T ss_pred HHhc------CcEEEEEecCC-------HHHHHHHHHHHHHCCC--------CEEEEeCC--CHHHHHHHHhcCCEEEEC
Confidence 8753 24577777431 1345566666554321 34456676 57888877 569999999
Q ss_pred CCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC------------ceEEECCCCHHHHHHHHHHH---hCCCHHHH
Q psy2719 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH------------EALLVNPYEIDAAANVLHRA---LCMPRDER 479 (808)
Q Consensus 415 S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~------------~~llvnP~d~~~lA~ai~~~---L~~~~~e~ 479 (808)
|.+||||++.+|||||+ +|+|+|+.+|..+.+. +|++|+|.|+++++++|.++ ++ .++.+
T Consensus 377 S~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~-d~~~~ 451 (485)
T PRK14099 377 SRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA-DPVAW 451 (485)
T ss_pred CccCCCcHHHHHHHHCC----CCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhc-CHHHH
Confidence 99999999999999995 4688899988888762 49999999999999999984 43 33444
Q ss_pred HHHHHHHhHHHhcCCHHHHHHHHHHHHHccc
Q psy2719 480 ELRMSQLRHREQQLDVNHWMNSFLSSMGALD 510 (808)
Q Consensus 480 ~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 510 (808)
++..++.+ .+.++|..-++++++..+++.
T Consensus 452 ~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 452 RRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred HHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 43333333 467899998888887776653
No 22
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.91 E-value=2.3e-23 Score=239.56 Aligned_cols=203 Identities=15% Similarity=0.204 Sum_probs=149.5
Q ss_pred eEEEEEEeecCcCccccchhhcC-----------------chhhhhc-----CCCeEEEEEcCccccCChHHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAEN-----------------APENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERL 336 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~-----------------~~~~~~~-----~~~~iil~V~Rl~~~KGi~~~l~A~~~l 336 (808)
+..++.+||||||++.|.+.... ...++++ .+.++|++|||+.+.||++.+++|++++
T Consensus 228 ~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l 307 (466)
T PRK00654 228 RSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPEL 307 (466)
T ss_pred cccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHH
Confidence 35679999999999998764210 0112222 2568999999999999999999999998
Q ss_pred HHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC
Q psy2719 337 LEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL 416 (808)
Q Consensus 337 l~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~ 416 (808)
+++ + +.|+++|.+. + .+++++++++.+.+. .+.++.+. +.+.+..+|++||+||+||.
T Consensus 308 ~~~--~----~~lvivG~g~----~---~~~~~l~~l~~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~ 365 (466)
T PRK00654 308 LEQ--G----GQLVLLGTGD----P---ELEEAFRALAARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSR 365 (466)
T ss_pred Hhc--C----CEEEEEecCc----H---HHHHHHHHHHHHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCC
Confidence 764 2 4577777432 1 245566666655432 24555555 66667899999999999999
Q ss_pred CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---------CceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHH
Q psy2719 417 RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---------HEALLVNPYEIDAAANVLHRALCM--PRDERELRMSQ 485 (808)
Q Consensus 417 ~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---------~~~llvnP~d~~~lA~ai~~~L~~--~~~e~~~r~~~ 485 (808)
+||||++.+|||+|+ .|+|+|+.+|..+.+ .+|++|+|.|+++++++|.++++. .++.++++..+
T Consensus 366 ~E~~gl~~lEAma~G----~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 441 (466)
T PRK00654 366 FEPCGLTQLYALRYG----TLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQ 441 (466)
T ss_pred CCCchHHHHHHHHCC----CCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 999999999999995 579999999998877 249999999999999999999863 22233333332
Q ss_pred HhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 486 LRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 486 ~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
.+ ...++|+.-++++++..+++
T Consensus 442 ~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 442 AM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred Hh--ccCCChHHHHHHHHHHHHHH
Confidence 22 25788888888887766654
No 23
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.91 E-value=3.2e-23 Score=232.27 Aligned_cols=265 Identities=18% Similarity=0.233 Sum_probs=183.2
Q ss_pred CCCEEEEeccchHHHHHHHHhhc--CC-EEEeccHHHHHHHHHHHHHHhC-ceeecCCeEEEEcCeEEEEEEeecCcCcc
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA--YD-FVGFHIEDYCLNFIDCCCRRLG-SRVDRNNMLVELAGRTVHVKALPIGIPFE 293 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~--~d-ligf~~~~~~~~fl~~~~~~l~-~~~~~~~~~i~~~gr~~~v~v~p~GID~~ 293 (808)
..|+|++|+... +.. .++++. +- ++.+|.. +....+..+.+++. ++...+.+ .-.....++.++|+|||.+
T Consensus 99 ~~~vi~v~~~~~-~~~-~~~~~~~~~~~v~~~h~~-~~~~~~~~~~~ii~~S~~~~~~~--~~~~~~~~i~vIpngvd~~ 173 (380)
T PRK15484 99 KDSVIVIHNSMK-LYR-QIRERAPQAKLVMHMHNA-FEPELLDKNAKIIVPSQFLKKFY--EERLPNADISIVPNGFCLE 173 (380)
T ss_pred CCcEEEEeCcHH-hHH-HHHhhCCCCCEEEEEecc-cChhHhccCCEEEEcCHHHHHHH--HhhCCCCCEEEecCCCCHH
Confidence 489999999543 222 233332 22 3455543 22323333222221 11111111 0012234678999999998
Q ss_pred ccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHH
Q psy2719 294 RFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDE 369 (808)
Q Consensus 294 ~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~ 369 (808)
.|.+... ...++. .+.++|+++||+.+.||++.+++|+.++.+++|++ .|+++|.+......+..+++++
T Consensus 174 ~~~~~~~--~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~ 247 (380)
T PRK15484 174 TYQSNPQ--PNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNL----KLVVVGDPTASSKGEKAAYQKK 247 (380)
T ss_pred HcCCcch--HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHHHhCCCe----EEEEEeCCccccccchhHHHHH
Confidence 8875321 111211 36789999999999999999999999999888876 4888886543221223356667
Q ss_pred HHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC-CCCChhHHHHHHhccCCCceEEEcCCCCCcc
Q psy2719 370 MDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR-DGMNLVAKEYVACQIREPGVLILSPFAGAGG 448 (808)
Q Consensus 370 l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~-EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~ 448 (808)
+++++.+++. .+ .+.|.++.+++..+|+.||++|+||.+ ||||++++|||||+ .|+|+|..+|..+
T Consensus 248 l~~~~~~l~~--------~v-~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G----~PVI~s~~gg~~E 314 (380)
T PRK15484 248 VLEAAKRIGD--------RC-IMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG----KPVLASTKGGITE 314 (380)
T ss_pred HHHHHHhcCC--------cE-EEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC----CCEEEeCCCCcHh
Confidence 7777666542 24 467899999999999999999999974 99999999999995 5689999888887
Q ss_pred ccC---ceE-EECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 449 MMH---EAL-LVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 449 ~l~---~~l-lvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
.+. +|+ +++|.|++++|++|.++++++. ++++.+++++.+ ++++|..-++++++.|+.
T Consensus 315 iv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 315 FVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred hcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 773 476 6789999999999999998653 345556666554 678999999999988865
No 24
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.91 E-value=4.2e-23 Score=233.12 Aligned_cols=261 Identities=17% Similarity=0.172 Sum_probs=188.0
Q ss_pred CCCEEEEeccchHHHHHHHHhhc----CCEEEeccHHH------------HHHHHHHHHHHhCc-eeecCCeEEEEcCeE
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA----YDFVGFHIEDY------------CLNFIDCCCRRLGS-RVDRNNMLVELAGRT 280 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~----~dligf~~~~~------------~~~fl~~~~~~l~~-~~~~~~~~i~~~gr~ 280 (808)
..|+|+.|..+...+..++++.. .-...+|..+. .+..+..++.++.. +...+.+ ..++...
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l-~~~g~~~ 196 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRL-QKMGCPP 196 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHH-HHcCCCH
Confidence 47999999988766666666521 12344554321 11112222222221 1111111 2233345
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++|+|||++.|.+..... ..+...|++|||+.+.||++.+++|++.+.+++|++ .|+++|.+
T Consensus 197 ~ki~vi~nGvd~~~f~~~~~~~-----~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~ivG~G----- 262 (406)
T PRK15427 197 EKIAVSRMGVDMTRFSPRPVKA-----PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAF----RYRILGIG----- 262 (406)
T ss_pred HHEEEcCCCCCHHHcCCCcccc-----CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCE----EEEEEECc-----
Confidence 6788999999999886532110 134457999999999999999999999998877765 47777742
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC------CCCChhHHHHHHhccCC
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR------DGMNLVAKEYVACQIRE 434 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~------EG~gLv~~Eama~~~~~ 434 (808)
+ +++++++++.+.+. .+.+.+.|.++++++..+|+.||+||+||.. ||||++++|||||+
T Consensus 263 ~----~~~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G--- 328 (406)
T PRK15427 263 P----WERRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVG--- 328 (406)
T ss_pred h----hHHHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCC---
Confidence 2 33455666655432 2456678999999999999999999999984 99999999999996
Q ss_pred CceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
.|+|+|..+|..+.+. +|++|+|.|++++|++|.+++++++++++++.+++++++ ..++++..++++.+.+++
T Consensus 329 -~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 329 -IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred -CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 5699999988888874 599999999999999999999966777777777788777 567999999888877654
No 25
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.91 E-value=2.2e-23 Score=222.56 Aligned_cols=208 Identities=15% Similarity=0.175 Sum_probs=142.0
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|++|+||||++ ++..++++++++|++|+++ |+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~----------------------------------------G~ 37 (270)
T PRK10513 3 IKLIAIDMDGTLLL-----PDHTISPAVKQAIAAARAK----------------------------------------GV 37 (270)
T ss_pred eEEEEEecCCcCcC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 47999999999998 3457999999999999988 99
Q ss_pred eEEEEeCCChhhHHHhcC---cc--ceEEEcccceeEecC--CCceeecCCChhHHHHHHHHHHHHHhhc------cCCC
Q psy2719 623 NIGIISGRTLENLMKMVN---IE--KVTYAGSHGLEILHP--DGTKFVHPVPKEYAEKLRQLIKALQDEV------CHDG 689 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~---~~--~~~li~~nG~~i~~~--~~~~~~~~~~~~~~~~v~~i~~~~~~~~------~~~g 689 (808)
.|+|+|||++..+...+. .. ..++|++||+.|++. ++..+..+++.+ .+..+++...+.- ...+
T Consensus 38 ~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~ 114 (270)
T PRK10513 38 NVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTALSYD---DYLYLEKLSREVGVHFHALDRNT 114 (270)
T ss_pred EEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecCCCHH---HHHHHHHHHHHcCCcEEEEECCE
Confidence 999999999998877663 22 246899999999863 333566778765 4555555544320 0112
Q ss_pred cEEEecCcE-----------EEEEcCcC---Ch--hh-------HHHHHHHHHHHH-Hhc--CeeE-EccCeEEEEeCCC
Q psy2719 690 AWIENKGVL-----------LTFHYRET---PI--ER-------REYIIDRASQIF-LEA--GFEP-HNALMAIEAKPPV 742 (808)
Q Consensus 690 ~~ie~k~~~-----------~~~~~~~~---~~--~~-------~~~~~~~~~~~~-~~~--~~~v-~~g~~~vEv~p~~ 742 (808)
.+...+... +...+... ++ .. ..+...++.+.+ ..+ .+.+ .++..++||+|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~- 193 (270)
T PRK10513 115 LYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDK- 193 (270)
T ss_pred EEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCC-
Confidence 222111100 00000000 00 00 011112222222 222 3444 467789999998
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
++|||.|+++|+++ +|++.+ +++||| |++||+.++ ++|||+| .+++|++|+||+++|
T Consensus 194 gvsKg~al~~l~~~-~gi~~~---~v~afGD~~NDi~Ml~~ag---~~vAm~NA~~~vK~~A~~vt~~n 255 (270)
T PRK10513 194 RVNKGTGVKSLAEH-LGIKPE---EVMAIGDQENDIAMIEYAG---VGVAMGNAIPSVKEVAQFVTKSN 255 (270)
T ss_pred CCChHHHHHHHHHH-hCCCHH---HEEEECCchhhHHHHHhCC---ceEEecCccHHHHHhcCeeccCC
Confidence 99999999999997 899975 799999 999999994 4599997 689999999999876
No 26
>PLN02316 synthase/transferase
Probab=99.91 E-value=7.9e-23 Score=245.28 Aligned_cols=270 Identities=13% Similarity=0.110 Sum_probs=186.2
Q ss_pred CCCEEEEeccchHHHHHHHHhhc--------CCEEEeccHHHHHHHHHH----HHHHhCc-eeecCCeEEEE---cCeEE
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA--------YDFVGFHIEDYCLNFIDC----CCRRLGS-RVDRNNMLVEL---AGRTV 281 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~--------~dligf~~~~~~~~fl~~----~~~~l~~-~~~~~~~~i~~---~gr~~ 281 (808)
..|||++||+|..++|.+++... .-++..|...|..+++.. +++++.+ +.....+ ... ..+..
T Consensus 709 ~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~~~n~lk~~l~~AD~ViTVS~tya~EI-~~~~~l~~~~~ 787 (1036)
T PLN02316 709 HPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEFGANHIGKAMAYADKATTVSPTYSREV-SGNSAIAPHLY 787 (1036)
T ss_pred CCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcccchhHHHHHHHHCCEEEeCCHHHHHHH-HhccCcccccC
Confidence 37999999999999999887642 234567776665555443 3333322 1111111 111 22356
Q ss_pred EEEEeecCcCccccchhhcC------------------chhhhhc-----CCCeEEEEEcCccccCChHHHHHHHHHHHH
Q psy2719 282 HVKALPIGIPFERFVQLAEN------------------APENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLLE 338 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~------------------~~~~~~~-----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~ 338 (808)
++.+||||||++.|.|.... ...++++ .+.++|++||||.+.||++.+++|+.++++
T Consensus 788 Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~ 867 (1036)
T PLN02316 788 KFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE 867 (1036)
T ss_pred CEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh
Confidence 89999999999988653210 0112222 257899999999999999999999999886
Q ss_pred hCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCC
Q psy2719 339 KHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRD 418 (808)
Q Consensus 339 ~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~E 418 (808)
. + +.||++|.+. + ..++.++++++.+++..+. ..|.+ .+..+......+|++||+||+||.+|
T Consensus 868 ~--~----~qlVIvG~Gp-----d-~~~e~~l~~La~~Lg~~~~----~rV~f-~g~~de~lah~iyaaADiflmPS~~E 930 (1036)
T PLN02316 868 R--N----GQVVLLGSAP-----D-PRIQNDFVNLANQLHSSHH----DRARL-CLTYDEPLSHLIYAGADFILVPSIFE 930 (1036)
T ss_pred c--C----cEEEEEeCCC-----C-HHHHHHHHHHHHHhCccCC----CeEEE-EecCCHHHHHHHHHhCcEEEeCCccc
Confidence 3 2 4477777432 1 2356677788777654332 13443 34445443457999999999999999
Q ss_pred CCChhHHHHHHhccCCCceEEEcCCCCCccccC----------------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHH
Q psy2719 419 GMNLVAKEYVACQIREPGVLILSPFAGAGGMMH----------------EALLVNPYEIDAAANVLHRALCMPRDERELR 482 (808)
Q Consensus 419 G~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~----------------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r 482 (808)
||||+.+|||+|+ .|+|+|..+|..+.+. +|++|+|.|+++++.+|.++|....+.+...
T Consensus 931 P~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~ 1006 (1036)
T PLN02316 931 PCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWF 1006 (1036)
T ss_pred CccHHHHHHHHcC----CCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHH
Confidence 9999999999995 5789999999988862 4999999999999999999998543323222
Q ss_pred HHHHhHHH-hcCCHHHHHHHHHHHHHcc
Q psy2719 483 MSQLRHRE-QQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 483 ~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 509 (808)
....++.+ ..++|..=++++++..+.+
T Consensus 1007 ~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 1007 NSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 33334433 4689999999988776654
No 27
>PLN02939 transferase, transferring glycosyl groups
Probab=99.91 E-value=2e-22 Score=237.58 Aligned_cols=207 Identities=11% Similarity=0.091 Sum_probs=153.5
Q ss_pred CeEEEEEEeecCcCccccchhhcC-----------------chhhhhc-------CCCeEEEEEcCccccCChHHHHHHH
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAEN-----------------APENLKD-------ENLKVILGVDRLDYTKGLVHRIKAF 333 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~-----------------~~~~~~~-------~~~~iil~V~Rl~~~KGi~~~l~A~ 333 (808)
.+..++.+||||||++.|.|.... ...++++ .+.++|++|||+.+.||++.+++|+
T Consensus 722 ~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~ 801 (977)
T PLN02939 722 FHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAI 801 (977)
T ss_pred cccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHH
Confidence 356788999999999999875321 0112222 1458999999999999999999999
Q ss_pred HHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEE
Q psy2719 334 ERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALV 413 (808)
Q Consensus 334 ~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~ 413 (808)
..+++ ++ +.|+++|.+. .+ .++++++.++.+++.. ..| .|.+.++......+|++||+||+
T Consensus 802 ~~Ll~--~d----vqLVIvGdGp---~~---~~e~eL~~La~~l~l~------drV-~FlG~~de~lah~IYAaADIFLm 862 (977)
T PLN02939 802 YKTAE--LG----GQFVLLGSSP---VP---HIQREFEGIADQFQSN------NNI-RLILKYDEALSHSIYAASDMFII 862 (977)
T ss_pred HHHhh--cC----CEEEEEeCCC---cH---HHHHHHHHHHHHcCCC------CeE-EEEeccCHHHHHHHHHhCCEEEE
Confidence 98875 23 4577777432 11 3456667776665421 134 44577787777899999999999
Q ss_pred CCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc------------CceEEECCCCHHHHHHHHHHHhC---CCHHH
Q psy2719 414 TPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM------------HEALLVNPYEIDAAANVLHRALC---MPRDE 478 (808)
Q Consensus 414 ~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l------------~~~llvnP~d~~~lA~ai~~~L~---~~~~e 478 (808)
||.+|||||+++|||+|+ .|||++..+|..+.+ .+|++|+|.|+++++++|.+++. ..++.
T Consensus 863 PSr~EPfGLvqLEAMAyG----tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~ 938 (977)
T PLN02939 863 PSMFEPCGLTQMIAMRYG----SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEV 938 (977)
T ss_pred CCCccCCcHHHHHHHHCC----CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHH
Confidence 999999999999999995 578999999988765 25999999999999999999885 23444
Q ss_pred HHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 479 RELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 479 ~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
++.+..+. ....++|...++.+++...++
T Consensus 939 ~~~L~~~a--m~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 939 WKQLVQKD--MNIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred HHHHHHHH--HHhcCCHHHHHHHHHHHHHHH
Confidence 44333322 236789999999988777665
No 28
>PRK10976 putative hydrolase; Provisional
Probab=99.90 E-value=3.6e-23 Score=220.51 Aligned_cols=207 Identities=14% Similarity=0.132 Sum_probs=141.0
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|+|++|+||||++ ++..++++++++|++|+++ |+.
T Consensus 3 kli~~DlDGTLl~-----~~~~is~~~~~ai~~l~~~----------------------------------------G~~ 37 (266)
T PRK10976 3 QVVASDLDGTLLS-----PDHTLSPYAKETLKLLTAR----------------------------------------GIH 37 (266)
T ss_pred eEEEEeCCCCCcC-----CCCcCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 6999999999998 3457999999999999988 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCc-eeecCCChhHHHHHHHHHHHHHhh--c-----cCCCcEEE
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGT-KFVHPVPKEYAEKLRQLIKALQDE--V-----CHDGAWIE 693 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~--~-----~~~g~~ie 693 (808)
|+|+|||++..+.+.+.. ...++|++||+.+++.++. .+..+++.+ .+.++++.+.+. . ...+.++.
T Consensus 38 ~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 114 (266)
T PRK10976 38 FVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRD---IASDLFGVVHDNPDIITNVYRDDEWFMN 114 (266)
T ss_pred EEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHH---HHHHHHHhhcccCCEEEEEEcCCeEEEc
Confidence 999999999988776642 1346899999999875443 455677765 566666655431 0 01111211
Q ss_pred ecCc-----------EEEEE-cCcCCh-hh--------HHHHHHHHHHHHH-hc--CeeE-EccCeEEEEeCCCCCCHHH
Q psy2719 694 NKGV-----------LLTFH-YRETPI-ER--------REYIIDRASQIFL-EA--GFEP-HNALMAIEAKPPVKWDQGR 748 (808)
Q Consensus 694 ~k~~-----------~~~~~-~~~~~~-~~--------~~~~~~~~~~~~~-~~--~~~v-~~g~~~vEv~p~~~v~KG~ 748 (808)
.... ..... ...... .. ..+....+.+.+. .+ .+.+ .++..++||+|+ ++|||.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~ 193 (266)
T PRK10976 115 RHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAG-GVSKGH 193 (266)
T ss_pred CCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcC-CCChHH
Confidence 1000 00000 000000 00 0111222223222 22 2444 466789999998 999999
Q ss_pred HHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccc--cccCcC
Q psy2719 749 ASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWK--QGSNHT 806 (808)
Q Consensus 749 av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~--~~~~~~ 806 (808)
|+++|+++ +|++.+ +++||| |++||+.++ ++|||+| .+++|+.|+ +|+++|
T Consensus 194 al~~l~~~-lgi~~~---~viafGD~~NDi~Ml~~ag---~~vAm~NA~~~vK~~A~~~~v~~~n 251 (266)
T PRK10976 194 ALEAVAKK-LGYSLK---DCIAFGDGMNDAEMLSMAG---KGCIMGNAHQRLKDLLPELEVIGSN 251 (266)
T ss_pred HHHHHHHH-cCCCHH---HeEEEcCCcccHHHHHHcC---CCeeecCCcHHHHHhCCCCeecccC
Confidence 99999997 899975 899999 999999995 4599997 589999988 788865
No 29
>PLN00142 sucrose synthase
Probab=99.90 E-value=1.9e-22 Score=237.04 Aligned_cols=321 Identities=13% Similarity=0.107 Sum_probs=206.0
Q ss_pred EeecCCHHHHhHHHHhhhHhhhhhhccC---CCCccccCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEE
Q psy2719 146 IPVHVDKDEFEAYYNGCCNGTFWPLFHS---MPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222 (808)
Q Consensus 146 ~pv~l~~~~~~~~y~~f~~~~lwp~~H~---~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvv 222 (808)
.|=+++++++-.|...|+..++--+... .|| ..+.|+|.+-.- |..+... -+|.
T Consensus 377 l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PD--lIHaHYwdsg~v-----A~~La~~----------------lgVP 433 (815)
T PLN00142 377 LRKWISRFDVWPYLETFAEDAASEILAELQGKPD--LIIGNYSDGNLV-----ASLLAHK----------------LGVT 433 (815)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCC--EEEECCccHHHH-----HHHHHHH----------------hCCC
Confidence 3457788888888898988888554332 244 567889988430 4443322 5789
Q ss_pred EEeccchHHHHHHHHhhcCCE--------EEeccHHHHHH-HHHHHHHHhCceee-cCCe--EE-EE-------------
Q psy2719 223 WIHDYQLLVAATTIRQVAYDF--------VGFHIEDYCLN-FIDCCCRRLGSRVD-RNNM--LV-EL------------- 276 (808)
Q Consensus 223 wihDyhl~llp~~lr~~~~dl--------igf~~~~~~~~-fl~~~~~~l~~~~~-~~~~--~i-~~------------- 276 (808)
+||.+|.+-..... ..++ ..|...-.++. .++.++.++.+... ..++ .+ +|
T Consensus 434 ~v~T~HsL~k~K~~---~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~r 510 (815)
T PLN00142 434 QCTIAHALEKTKYP---DSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYR 510 (815)
T ss_pred EEEEcccchhhhcc---ccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhh
Confidence 99999987644332 1111 01111001111 23345555543221 1100 01 01
Q ss_pred --cCe---EEEEEEeecCcCccccchhhcCchh--------------------hhh---cCCCeEEEEEcCccccCChHH
Q psy2719 277 --AGR---TVHVKALPIGIPFERFVQLAENAPE--------------------NLK---DENLKVILGVDRLDYTKGLVH 328 (808)
Q Consensus 277 --~gr---~~~v~v~p~GID~~~f~~~~~~~~~--------------------~~~---~~~~~iil~V~Rl~~~KGi~~ 328 (808)
+|- ..++.++|+|+|...|.|....... ... ..++++|++|||+++.||++.
T Consensus 511 vv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~ 590 (815)
T PLN00142 511 VVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTG 590 (815)
T ss_pred hhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHH
Confidence 011 2378899999999988753211000 011 145679999999999999999
Q ss_pred HHHHHHHHHHhCCCccCcEEEEEEEcC-CCCChHH--HHHHHHHHHHHHHHHhccCCCCCCccEEEEc---CCCCHHHHH
Q psy2719 329 RIKAFERLLEKHPEYVEKVTFLQISVP-SRTDVLE--YKALKDEMDQLVGRINGRFSKPNWSPIRYIF---GCIGQEELA 402 (808)
Q Consensus 329 ~l~A~~~ll~~~p~~~~~v~lv~ig~~-~~~~~~~--~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~---~~v~~~el~ 402 (808)
+++||.++.+..++ +.|+++|.+ .....++ ..+..+++.+++.+.+.. + .|.++. +..+.++++
T Consensus 591 LIeA~a~l~~l~~~----~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLy 660 (815)
T PLN00142 591 LVEWYGKNKRLREL----VNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELY 660 (815)
T ss_pred HHHHHHHHHHhCCC----cEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHH
Confidence 99999988665544 458888854 1111111 112224556666665432 1 344432 245567888
Q ss_pred HHHH-hcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhC---CC
Q psy2719 403 ALYR-DSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALC---MP 475 (808)
Q Consensus 403 aly~-~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~---~~ 475 (808)
.+|+ ++|+||+||.+||||++++|||||+ .|+|+|+.+|..+.+. +|++|+|.|++++|++|.+++. .+
T Consensus 661 r~iadaaDVfVlPS~~EgFGLvvLEAMA~G----lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~D 736 (815)
T PLN00142 661 RYIADTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKED 736 (815)
T ss_pred HHHHhhCCEEEeCCcccCCCHHHHHHHHcC----CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC
Confidence 8777 5799999999999999999999996 5699999999988884 5999999999999999987652 34
Q ss_pred HHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHH
Q psy2719 476 RDERELRMSQLRHRE-QQLDVNHWMNSFLSSM 506 (808)
Q Consensus 476 ~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l 506 (808)
++.+++..+++++++ +.+||...++++++..
T Consensus 737 p~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 737 PSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 556666666677776 6789999999988755
No 30
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.90 E-value=4.1e-23 Score=220.83 Aligned_cols=207 Identities=15% Similarity=0.205 Sum_probs=140.8
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
+||++|+||||++ ++..++++++++|++|+++ |+.
T Consensus 3 kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~----------------------------------------G~~ 37 (272)
T PRK15126 3 RLAAFDMDGTLLM-----PDHHLGEKTLSTLARLRER----------------------------------------DIT 37 (272)
T ss_pred cEEEEeCCCcCcC-----CCCcCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 6999999999998 3457999999999999988 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCc-eeecCCChhHHHHHHHHHHHHHhh-c-----cCCCcEEEe
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGT-KFVHPVPKEYAEKLRQLIKALQDE-V-----CHDGAWIEN 694 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~-~-----~~~g~~ie~ 694 (808)
|+|+|||++..+.+.+.. .+.++|++||+.|++.++. .+..+++.+ .+.++++...+. . ...+.+...
T Consensus 38 ~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 114 (272)
T PRK15126 38 LTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD---VAELVLHQQWDTRASMHVFNDDGWFTGK 114 (272)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH---HHHHHHHHhhhcCcEEEEEcCCeEEecC
Confidence 999999999998877642 1346899999999964443 566778765 455666554332 0 011111110
Q ss_pred cCc---------EEEEEcCc---CC-hhh-------HHHHHHHHHHHHHh-c--CeeE-EccCeEEEEeCCCCCCHHHHH
Q psy2719 695 KGV---------LLTFHYRE---TP-IER-------REYIIDRASQIFLE-A--GFEP-HNALMAIEAKPPVKWDQGRAS 750 (808)
Q Consensus 695 k~~---------~~~~~~~~---~~-~~~-------~~~~~~~~~~~~~~-~--~~~v-~~g~~~vEv~p~~~v~KG~av 750 (808)
... ...+.... .. ... ..+...++.+.+.+ + .+.+ .++..++||.|+ ++|||+|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-g~sKg~al 193 (272)
T PRK15126 115 EIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPV-GCNKGAAL 193 (272)
T ss_pred CcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecC-CCChHHHH
Confidence 000 00000000 00 000 01112333333322 2 2444 466689999998 99999999
Q ss_pred HHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCcccccccc--ccCcC
Q psy2719 751 IHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQ--GSNHT 806 (808)
Q Consensus 751 ~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~--~~~~~ 806 (808)
+.|+++ +|++.+ +++||| |++||+.++ ++|||+| .+++|++|+| ++++|
T Consensus 194 ~~l~~~-~gi~~~---~v~afGD~~NDi~Ml~~ag---~~vAm~Na~~~vK~~A~~~~v~~~n 249 (272)
T PRK15126 194 AVLSQH-LGLSLA---DCMAFGDAMNDREMLGSVG---RGFIMGNAMPQLRAELPHLPVIGHC 249 (272)
T ss_pred HHHHHH-hCCCHH---HeEEecCCHHHHHHHHHcC---CceeccCChHHHHHhCCCCeecCCC
Confidence 999997 899975 799999 999999995 4599998 5899999997 77764
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.90 E-value=2.3e-22 Score=224.80 Aligned_cols=289 Identities=19% Similarity=0.183 Sum_probs=189.4
Q ss_pred cCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhcCCE-EEeccHH--------
Q psy2719 180 FNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVAYDF-VGFHIED-------- 250 (808)
Q Consensus 180 ~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~~dl-igf~~~~-------- 250 (808)
+....+..|...++.++..+. .. ...|+||+|+++.+.++...+....-+ +.+|+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~Dvv~~h~~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~ 126 (372)
T cd03792 61 LSEEEKEIYLEWNEENAERPL---LD-----------LDADVVVIHDPQPLALPLFKKKRGRPWIWRCHIDLSSPNRRVW 126 (372)
T ss_pred CCHHHHHHHHHHHHHHhcccc---cc-----------CCCCEEEECCCCchhHHHhhhcCCCeEEEEeeeecCCCcHHHH
Confidence 445577888888887766421 11 147999999999887776654423222 3444321
Q ss_pred -HHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhh---cCchhhhhc----CCCeEEEEEcCccc
Q psy2719 251 -YCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLA---ENAPENLKD----ENLKVILGVDRLDY 322 (808)
Q Consensus 251 -~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~---~~~~~~~~~----~~~~iil~V~Rl~~ 322 (808)
+.+.++..++.++... ... +...-...++ ++|+|||+....... ......+++ .++++|++|||+++
T Consensus 127 ~~~~~~~~~~d~~i~~~--~~~--~~~~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~ 201 (372)
T cd03792 127 DFLQPYIEDYDAAVFHL--PEY--VPPQVPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVSRFDP 201 (372)
T ss_pred HHHHHHHHhCCEEeecH--HHh--cCCCCCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEecccc
Confidence 2222332222222111 010 1111112233 899999975421111 011122222 57889999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC-CCHHHH
Q psy2719 323 TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGC-IGQEEL 401 (808)
Q Consensus 323 ~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~-v~~~el 401 (808)
.||++.+++|++.+.++.|++ .|+++|.+...+ ++..++. +++..+.+.. ..+.++... ++.+++
T Consensus 202 ~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~~-~~~~~~~---~~~~~~~~~~------~~v~~~~~~~~~~~~~ 267 (372)
T cd03792 202 WKDPFGVIDAYRKVKERVPDP----QLVLVGSGATDD-PEGWIVY---EEVLEYAEGD------PDIHVLTLPPVSDLEV 267 (372)
T ss_pred ccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCCC-chhHHHH---HHHHHHhCCC------CCeEEEecCCCCHHHH
Confidence 999999999999998887775 488888654221 2222222 2222222211 135555333 489999
Q ss_pred HHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHH
Q psy2719 402 AALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDE 478 (808)
Q Consensus 402 ~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e 478 (808)
.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+. +|+++++ .+++|++|.+++++ +++
T Consensus 268 ~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ll~~-~~~ 340 (372)
T cd03792 268 NALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILYLLRD-PEL 340 (372)
T ss_pred HHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHHHHcC-HHH
Confidence 999999999999999999999999999996 5699999988888773 4888874 57899999999985 456
Q ss_pred HHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 479 RELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 479 ~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
+.++.+++++.+ ..++++..++++++.+++
T Consensus 341 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 341 RRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 666666777776 578999999999988765
No 32
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.90 E-value=9.4e-23 Score=232.94 Aligned_cols=211 Identities=17% Similarity=0.243 Sum_probs=153.0
Q ss_pred eEEEEEEeecCcCccccchhhcCc--hhh---hhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEE
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA--PEN---LKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTF 349 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~--~~~---~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~l 349 (808)
...++.+||||||++.|.+..... ... ++. .++++|++|||+.+.||++.+|+||+++.+..+.. ++++
T Consensus 207 ~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l 284 (439)
T TIGR02472 207 QPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL 284 (439)
T ss_pred CccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE
Confidence 356889999999999997642211 111 111 46789999999999999999999998642211111 2222
Q ss_pred EEEEcCCCCChHHH----HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhc----CeEEECCCCCCCC
Q psy2719 350 LQISVPSRTDVLEY----KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDS----AIALVTPLRDGMN 421 (808)
Q Consensus 350 v~ig~~~~~~~~~~----~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~A----dv~v~~S~~EG~g 421 (808)
++|.+. +.+.+ .+..+++..++.+++. ...+.|.|.+++++++++|+.| |+||+||.+||||
T Consensus 285 -i~G~g~--~~~~l~~~~~~~~~~~~~~~~~~~l-------~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg 354 (439)
T TIGR02472 285 -VLGCRD--DIRKMESQQREVLQKVLLLIDRYDL-------YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFG 354 (439)
T ss_pred -EeCCcc--ccccccHHHHHHHHHHHHHHHHcCC-------CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcc
Confidence 334311 11111 1233344555555432 2335677999999999999988 9999999999999
Q ss_pred hhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHH
Q psy2719 422 LVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNH 497 (808)
Q Consensus 422 Lv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~ 497 (808)
++++|||||+ .|+|+|+.+|..+.+. +|++|+|.|++++|++|.++++. +++++++.++.++++ ..+||+.
T Consensus 355 ~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~ 429 (439)
T TIGR02472 355 LTLLEAAACG----LPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDA 429 (439)
T ss_pred cHHHHHHHhC----CCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999996 5699999988888774 59999999999999999999985 456666667777766 5679999
Q ss_pred HHHHHHHHH
Q psy2719 498 WMNSFLSSM 506 (808)
Q Consensus 498 W~~~~l~~l 506 (808)
-++++++.|
T Consensus 430 ~~~~~~~l~ 438 (439)
T TIGR02472 430 HVEKYLRIL 438 (439)
T ss_pred HHHHHHHHh
Confidence 888887765
No 33
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.90 E-value=9.9e-22 Score=222.02 Aligned_cols=213 Identities=19% Similarity=0.208 Sum_probs=165.5
Q ss_pred cCeEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEE
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQI 352 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~i 352 (808)
+....++.++|+|||.+.|.+... ...+++ .++++|+++||+.+.||++.+++|++++++++|+. ++.|+++
T Consensus 183 ~~~~~ki~vi~ngvd~~~~~~~~~--~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~--~~~l~iv 258 (405)
T TIGR03449 183 DADPDRIDVVAPGADLERFRPGDR--ATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDR--NLRVIVV 258 (405)
T ss_pred CCChhhEEEECCCcCHHHcCCCcH--HHHHHhcCCCCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCc--ceEEEEE
Confidence 334568899999999988865321 112221 46789999999999999999999999999988873 4778888
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhcc
Q psy2719 353 SVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQI 432 (808)
Q Consensus 353 g~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~ 432 (808)
|.+.....+. .+++++++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||||++++|||||+
T Consensus 259 G~~~~~g~~~----~~~l~~~~~~~~l-------~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G- 326 (405)
T TIGR03449 259 GGPSGSGLAT----PDALIELAAELGI-------ADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACG- 326 (405)
T ss_pred eCCCCCcchH----HHHHHHHHHHcCC-------CceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcC-
Confidence 8654221122 2344555555432 234567799999999999999999999999999999999999995
Q ss_pred CCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 433 REPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 433 ~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
.|+|+|..+|..+.+. .|++++|.|++++|++|.++++. ++.+.+...++++.++.++|+.-++++++.+.++
T Consensus 327 ---~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 327 ---TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred ---CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5689999888887774 48999999999999999999984 4555555666777788899999999888777653
No 34
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.89 E-value=4.1e-22 Score=229.92 Aligned_cols=202 Identities=16% Similarity=0.194 Sum_probs=150.2
Q ss_pred eEEEEEEeecCcCccccchhhcC-----------------chhhhhc------CCCeEEEEEcCccccCChHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAEN-----------------APENLKD------ENLKVILGVDRLDYTKGLVHRIKAFER 335 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~-----------------~~~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~ 335 (808)
+..++.+||||||++.|.|.... ...++++ .++++|++|||+.+.||++.+++|+++
T Consensus 236 ~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 315 (473)
T TIGR02095 236 RSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPE 315 (473)
T ss_pred cCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHH
Confidence 34688999999999998764211 0112222 267899999999999999999999999
Q ss_pred HHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC
Q psy2719 336 LLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP 415 (808)
Q Consensus 336 ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S 415 (808)
+.++. +.|+++|.+. + ++++++++++.+.+. .+.++ +..+.+++..+|++||++++||
T Consensus 316 l~~~~------~~lvi~G~g~----~---~~~~~l~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aDv~l~pS 373 (473)
T TIGR02095 316 LLELG------GQLVVLGTGD----P---ELEEALRELAERYPG--------NVRVI-IGYDEALAHLIYAGADFILMPS 373 (473)
T ss_pred HHHcC------cEEEEECCCC----H---HHHHHHHHHHHHCCC--------cEEEE-EcCCHHHHHHHHHhCCEEEeCC
Confidence 87642 4578777432 2 345566666644321 24443 4568888899999999999999
Q ss_pred CCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---------ceEEECCCCHHHHHHHHHHHhCC---CHHHHHHHH
Q psy2719 416 LRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---------EALLVNPYEIDAAANVLHRALCM---PRDERELRM 483 (808)
Q Consensus 416 ~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---------~~llvnP~d~~~lA~ai~~~L~~---~~~e~~~r~ 483 (808)
.+||||++++|||+|+ .|+|+|+.+|..+.+. +|++++|.|+++++++|.+++.+ .++.++++.
T Consensus 374 ~~E~~gl~~lEAma~G----~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 449 (473)
T TIGR02095 374 RFEPCGLTQLYAMRYG----TVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQ 449 (473)
T ss_pred CcCCcHHHHHHHHHCC----CCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999995 5799999999998873 48999999999999999999873 233333333
Q ss_pred HHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 484 SQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 484 ~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
.+.. .+.+||+.-++++++..++
T Consensus 450 ~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 450 KNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHh--ccCCCcHHHHHHHHHHHHh
Confidence 3322 3578999999888876654
No 35
>PRK14098 glycogen synthase; Provisional
Probab=99.89 E-value=3.2e-22 Score=230.35 Aligned_cols=203 Identities=10% Similarity=0.122 Sum_probs=150.3
Q ss_pred eEEEEEEeecCcCccccchhhcCc-----------------hhhhhc------CCCeEEEEEcCccccCChHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA-----------------PENLKD------ENLKVILGVDRLDYTKGLVHRIKAFER 335 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~-----------------~~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~ 335 (808)
+..++.+||||||++.|.|..... ..++++ .+.++|++|||+.+.||++.+++|+.+
T Consensus 252 ~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~ 331 (489)
T PRK14098 252 RKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEK 331 (489)
T ss_pred cCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHH
Confidence 356899999999999998643210 011111 356899999999999999999999999
Q ss_pred HHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC
Q psy2719 336 LLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP 415 (808)
Q Consensus 336 ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S 415 (808)
+++. ++.|+++|.+. . .+++++++++.+... .|. +.+.++.+++..+|++||+||+||
T Consensus 332 l~~~------~~~lvivG~G~---~----~~~~~l~~l~~~~~~--------~V~-~~g~~~~~~~~~~~a~aDi~l~PS 389 (489)
T PRK14098 332 LVEL------DIQLVICGSGD---K----EYEKRFQDFAEEHPE--------QVS-VQTEFTDAFFHLAIAGLDMLLMPG 389 (489)
T ss_pred HHhc------CcEEEEEeCCC---H----HHHHHHHHHHHHCCC--------CEE-EEEecCHHHHHHHHHhCCEEEeCC
Confidence 8753 35588888432 1 245566666655421 243 457789999999999999999999
Q ss_pred CCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-------ceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHHH
Q psy2719 416 LRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-------EALLVNPYEIDAAANVLHRALCM--PRDERELRMSQL 486 (808)
Q Consensus 416 ~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-------~~llvnP~d~~~lA~ai~~~L~~--~~~e~~~r~~~~ 486 (808)
..||||++.+|||+|+ .|+|++..+|..+.+. +|++|+|.|+++++++|.+++.+ .++.+++...+.
T Consensus 390 ~~E~~Gl~~lEAma~G----~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~ 465 (489)
T PRK14098 390 KIESCGMLQMFAMSYG----TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA 465 (489)
T ss_pred CCCCchHHHHHHHhCC----CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999995 5689999989887762 59999999999999999998742 222222222222
Q ss_pred hHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 487 RHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 487 ~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
..+.+||+.-++++++..+++
T Consensus 466 --~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 --MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred --hcCCCChHHHHHHHHHHHHHH
Confidence 235789998888888776654
No 36
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.89 E-value=2.5e-21 Score=227.74 Aligned_cols=211 Identities=17% Similarity=0.219 Sum_probs=152.2
Q ss_pred EEEEEeecCcCccccchhhcCchh---h--------------hh------cCCCeEEEEEcCccccCChHHHHHHHHHHH
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPE---N--------------LK------DENLKVILGVDRLDYTKGLVHRIKAFERLL 337 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~---~--------------~~------~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll 337 (808)
.++.++|+|+|++.|.+......+ . ++ +.++++|++|||+++.||++.+++||.++.
T Consensus 497 ~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~ 576 (784)
T TIGR02470 497 PKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSP 576 (784)
T ss_pred CCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhH
Confidence 478999999999998764321110 0 01 146789999999999999999999998764
Q ss_pred HhCCCccCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC-CCHHHHHHHHH----hcC
Q psy2719 338 EKHPEYVEKVTFLQISVPSRT---DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGC-IGQEELAALYR----DSA 409 (808)
Q Consensus 338 ~~~p~~~~~v~lv~ig~~~~~---~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~-v~~~el~aly~----~Ad 409 (808)
+.. ..+.|+++|.+... ...+..+..+++.+++.+.+.. + .|. +.|. .+..++..+|+ .+|
T Consensus 577 ~l~----~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~----g--~V~-flG~~~~~~~~~elyr~iAd~ad 645 (784)
T TIGR02470 577 KLR----ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLH----G--QIR-WIGAQLNRVRNGELYRYIADTKG 645 (784)
T ss_pred hhC----CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCC----C--eEE-EccCcCCcccHHHHHHHhhccCc
Confidence 332 34568888864321 1112222345566666665421 1 344 4565 35666667776 247
Q ss_pred eEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhC---CCHHHHHHHH
Q psy2719 410 IALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALC---MPRDERELRM 483 (808)
Q Consensus 410 v~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~---~~~~e~~~r~ 483 (808)
+||+||.+||||||++|||||| .|+|+|..+|..+.+. +|++|+|.|++++|++|.++++ ..++.+++..
T Consensus 646 VfV~PS~~EpFGLvvLEAMAcG----lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms 721 (784)
T TIGR02470 646 IFVQPALYEAFGLTVLEAMTCG----LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKIS 721 (784)
T ss_pred EEEECCcccCCCHHHHHHHHcC----CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 9999999999999999999996 5699999999999884 5999999999999999998863 2455555566
Q ss_pred HHHhHHH-hcCCHHHHHHHHHHHH
Q psy2719 484 SQLRHRE-QQLDVNHWMNSFLSSM 506 (808)
Q Consensus 484 ~~~~~~v-~~~~~~~W~~~~l~~l 506 (808)
.++++++ +.+||...++++++..
T Consensus 722 ~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 722 QGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 6666666 6789999999988765
No 37
>PLN02887 hydrolase family protein
Probab=99.88 E-value=6.3e-22 Score=228.12 Aligned_cols=215 Identities=16% Similarity=0.183 Sum_probs=145.1
Q ss_pred HhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHH
Q psy2719 534 LNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVL 613 (808)
Q Consensus 534 ~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l 613 (808)
++-|+ .+.++|++|+||||++ +++.++++++++|++|+++
T Consensus 301 ~~~~~--~~iKLIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ek--------------------------------- 340 (580)
T PLN02887 301 LRFYK--PKFSYIFCDMDGTLLN-----SKSQISETNAKALKEALSR--------------------------------- 340 (580)
T ss_pred hhhhc--cCccEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHC---------------------------------
Confidence 45554 3678999999999998 3457999999999999998
Q ss_pred HHHhCCCCCeEEEEeCCChhhHHHhcC---cc-c-------eEEEcccceeEecCCC-ceeecCCChhHHHHHHHHHHHH
Q psy2719 614 ERLANMPDVNIGIISGRTLENLMKMVN---IE-K-------VTYAGSHGLEILHPDG-TKFVHPVPKEYAEKLRQLIKAL 681 (808)
Q Consensus 614 ~~l~~~pg~~v~I~SGR~~~~l~~~~~---~~-~-------~~li~~nG~~i~~~~~-~~~~~~~~~~~~~~v~~i~~~~ 681 (808)
|+.|+|+|||++..+...+. +. . .+.|+.||+.|++.++ ..+...++.+ .+.++++.+
T Consensus 341 -------Gi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~L~~e---~v~eIi~~~ 410 (580)
T PLN02887 341 -------GVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQGREIYRSNLDQE---VCREACLYS 410 (580)
T ss_pred -------CCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCCcEEEEEeCCHH---HHHHHHHHH
Confidence 99999999999998877653 21 1 1456789999986443 3566778775 566666655
Q ss_pred Hhhc------cCCCcEEEecCcEEE-EE--cCc-----C-Ch-hh--------------HHHHHHHHHHHHH-hc--Cee
Q psy2719 682 QDEV------CHDGAWIENKGVLLT-FH--YRE-----T-PI-ER--------------REYIIDRASQIFL-EA--GFE 728 (808)
Q Consensus 682 ~~~~------~~~g~~ie~k~~~~~-~~--~~~-----~-~~-~~--------------~~~~~~~~~~~~~-~~--~~~ 728 (808)
.+.- ...+.+......... .+ +.. . +. +. .+.....+.+.+. .+ .+.
T Consensus 411 ~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~ 490 (580)
T PLN02887 411 LEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRAN 490 (580)
T ss_pred HHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEE
Confidence 4420 011122110000000 00 000 0 00 00 0011112222222 12 244
Q ss_pred E-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccc
Q psy2719 729 P-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQG 802 (808)
Q Consensus 729 v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~ 802 (808)
+ .++..++||+|+ ++|||.||+.|+++ +||+.+ +||||| |++||+.++ ++|||+| .++||++|+||
T Consensus 491 v~~S~~~~lEI~p~-gvSKG~ALk~L~e~-lGI~~e---eviAFGDs~NDIeMLe~AG---~gVAMgNA~eeVK~~Ad~V 562 (580)
T PLN02887 491 VVQAQPDMLEIVPP-GTSKGNGVKMLLNH-LGVSPD---EIMAIGDGENDIEMLQLAS---LGVALSNGAEKTKAVADVI 562 (580)
T ss_pred EEEecCcEEEEecC-CCCHHHHHHHHHHH-cCCCHH---HEEEEecchhhHHHHHHCC---CEEEeCCCCHHHHHhCCEE
Confidence 4 466789999998 99999999999997 899975 899999 999999994 4599998 58999999999
Q ss_pred cCcC
Q psy2719 803 SNHT 806 (808)
Q Consensus 803 ~~~~ 806 (808)
|++|
T Consensus 563 T~sN 566 (580)
T PLN02887 563 GVSN 566 (580)
T ss_pred eCCC
Confidence 9876
No 38
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.88 E-value=7.1e-21 Score=212.64 Aligned_cols=207 Identities=19% Similarity=0.253 Sum_probs=160.2
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
...++.++|+|||.+.|.+........++. .++.+|+++||+.+.||++.+++|+..++++.|+...++.|+++|.
T Consensus 158 ~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~ 237 (374)
T TIGR03088 158 PPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD 237 (374)
T ss_pred ChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC
Confidence 456788999999999886543221111111 4678999999999999999999999999999887655678888874
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
+. . ++++++++.+.+. ...+++.|. .+++..+|+.||++|+||..||||++++|||||+
T Consensus 238 g~-----~----~~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G--- 296 (374)
T TIGR03088 238 GP-----A----RGACEQMVRAAGL-------AHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG--- 296 (374)
T ss_pred Cc-----h----HHHHHHHHHHcCC-------cceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC---
Confidence 32 1 2344455444332 245666774 4689999999999999999999999999999996
Q ss_pred CceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
.|+|+|+.+|..+.+. +|++++|.|++++|++|.++++. ++++.....++++++ ..+++..-++++++..++
T Consensus 297 -~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 297 -LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred -CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5699999988888774 49999999999999999999974 455666666677776 578999988888876654
No 39
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.88 E-value=7.1e-22 Score=205.77 Aligned_cols=199 Identities=14% Similarity=0.173 Sum_probs=135.5
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|++|+||||++ ++..++++++++|++|++. |+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------G~ 37 (230)
T PRK01158 3 IKAIAIDIDGTITD-----KDRRLSLKAVEAIRKAEKL----------------------------------------GI 37 (230)
T ss_pred eeEEEEecCCCcCC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 36999999999998 3457999999999999987 99
Q ss_pred eEEEEeCCChhhHHHhcCc--cceEEEcccceeEecC--CCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEec--C
Q psy2719 623 NIGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHP--DGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENK--G 696 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~--~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k--~ 696 (808)
.|+|+|||+...+.+.+.. .+.++|++||+.++.. +...+..+++ .+.++++.+.+........+... .
T Consensus 38 ~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (230)
T PRK01158 38 PVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIE-----ECEKAYSELKKRFPEASTSLTKLDPD 112 (230)
T ss_pred EEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchH-----HHHHHHHHHHHhccccceeeecCCcc
Confidence 9999999999888766531 1346899999999875 3234444443 23333333332210001111100 0
Q ss_pred c--EEEEEcCcCChhhHHHHHHHHHHHHHhcC--eeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe
Q psy2719 697 V--LLTFHYRETPIERREYIIDRASQIFLEAG--FEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG 772 (808)
Q Consensus 697 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G 772 (808)
. .....++..+ .+++.+.++.++ +.+..+..++||.|+ ++|||.|++.++++ +|++.+ ++++||
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~-~~i~~~---~~i~~G 180 (230)
T PRK01158 113 YRKTEVALRRTVP-------VEEVRELLEELGLDLEIVDSGFAIHIKSP-GVNKGTGLKKLAEL-MGIDPE---EVAAIG 180 (230)
T ss_pred cccceeeeccccc-------HHHHHHHHHHcCCcEEEEecceEEEEeeC-CCChHHHHHHHHHH-hCCCHH---HEEEEC
Confidence 0 0001111111 122333344333 445555568999998 99999999999997 899865 799999
Q ss_pred ----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 773 ----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 ----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|++||+.++ ++|+|+| .+++|+.|+|++++|
T Consensus 181 D~~NDi~m~~~ag---~~vam~Na~~~vk~~a~~v~~~n 216 (230)
T PRK01158 181 DSENDLEMFEVAG---FGVAVANADEELKEAADYVTEKS 216 (230)
T ss_pred CchhhHHHHHhcC---ceEEecCccHHHHHhcceEecCC
Confidence 999999994 5699997 589999999999876
No 40
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.88 E-value=2.1e-21 Score=207.38 Aligned_cols=201 Identities=13% Similarity=0.171 Sum_probs=137.6
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
..++||+|+||||++. +..++++++++|++|+++ |
T Consensus 6 ~~~lI~~DlDGTLL~~-----~~~i~~~~~~ai~~l~~~----------------------------------------G 40 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS-----HTYDWQPAAPWLTRLREA----------------------------------------Q 40 (271)
T ss_pred CCeEEEEeCccCCcCC-----CCcCcHHHHHHHHHHHHc----------------------------------------C
Confidence 4679999999999982 346889999999999988 9
Q ss_pred CeEEEEeCCChhhHHHhcC---ccceEEEcccceeEecCCC-------ceeecCCChhHHHHHHHHHHHHHhhccCCCcE
Q psy2719 622 VNIGIISGRTLENLMKMVN---IEKVTYAGSHGLEILHPDG-------TKFVHPVPKEYAEKLRQLIKALQDEVCHDGAW 691 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~---~~~~~li~~nG~~i~~~~~-------~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ 691 (808)
+.|+|+|||++..+..++. ....++|++||+.|+.+.+ ..+..+++.+ .+.++++.+.+.. +..
T Consensus 41 i~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~---~~~~i~~~~~~~~---~~~ 114 (271)
T PRK03669 41 VPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHG---EIRQVLNTLREKE---GFK 114 (271)
T ss_pred CeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHH---HHHHHHHHHHHhc---CCc
Confidence 9999999999999887764 3234699999999987532 1234456654 5666666554320 100
Q ss_pred EE-------------------------ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCH
Q psy2719 692 IE-------------------------NKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQ 746 (808)
Q Consensus 692 ie-------------------------~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~K 746 (808)
+. .......+.+.. ++ +...++.+.+...++.+..+..++||+|+ ++||
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~l~~~~~~~~~~~~~iEi~~~-g~sK 188 (271)
T PRK03669 115 FTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRD-SD----ERMAQFTARLAELGLQFVQGARFWHVLDA-SAGK 188 (271)
T ss_pred eeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecC-CH----HHHHHHHHHHHHCCCEEEecCeeEEEecC-CCCH
Confidence 00 000001111111 11 12233333333335666555579999998 9999
Q ss_pred HHHHHHHHHHhcCC---CCCcceeEEEEe----CHHHHHhccCCccEEEeCC-C-Cc-----cccccccccCcC
Q psy2719 747 GRASIHILRTMYGV---DWSERVRIIYAG----NEDAMLALQGIACTFRVDS-S-PT-----VKSSWKQGSNHT 806 (808)
Q Consensus 747 G~av~~ll~~~~~i---~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~-~~-----vk~~A~~~~~~~ 806 (808)
|+|+++|+++ +|+ +.+ ++|||| |++||+.++ ++|||+| . +. +|..|+|+|+..
T Consensus 189 g~al~~l~~~-lgi~~~~~~---~viafGDs~NDi~Ml~~ag---~gvAM~~~~~~~~~l~~~~~~~~~~~~~~ 255 (271)
T PRK03669 189 DQAANWLIAT-YQQLSGTRP---TTLGLGDGPNDAPLLDVMD---YAVVVKGLNREGVHLQDDDPARVYRTQRE 255 (271)
T ss_pred HHHHHHHHHH-HHhhcCCCc---eEEEEcCCHHHHHHHHhCC---EEEEecCCCCCCcccccccCCceEeccCC
Confidence 9999999997 899 764 899999 999999994 5699994 3 32 566899998753
No 41
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.87 E-value=1.8e-21 Score=204.32 Aligned_cols=201 Identities=16% Similarity=0.252 Sum_probs=141.1
Q ss_pred EEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeEE
Q psy2719 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIG 625 (808)
Q Consensus 546 i~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~ 625 (808)
||+|+||||++ +...++++++++|++|+++ |+.++
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------g~~~~ 35 (254)
T PF08282_consen 1 IFSDLDGTLLN-----SDGKISPETIEALKELQEK----------------------------------------GIKLV 35 (254)
T ss_dssp EEEECCTTTCS-----TTSSSCHHHHHHHHHHHHT----------------------------------------TCEEE
T ss_pred cEEEECCceec-----CCCeeCHHHHHHHHhhccc----------------------------------------ceEEE
Confidence 68999999998 3456999999999999988 99999
Q ss_pred EEeCCChhhHHHhcCcc--ceEEEcccceeEecCCC-ceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEEE
Q psy2719 626 IISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDG-TKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFH 702 (808)
Q Consensus 626 I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~~ 702 (808)
++|||++..+.+++... ..++|++||+.+..+.+ ..+..+++.+ .+..+++.+.+. .-...+...+. ....
T Consensus 36 i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~---~~~~i~~~~~~~--~~~~~~~~~~~-~~~~ 109 (254)
T PF08282_consen 36 IATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSD---DVKKILKYLKEH--NISFFFYTDDD-IYIY 109 (254)
T ss_dssp EECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HH---HHHHHHHHHHHT--TCEEEEEESSE-EEES
T ss_pred EEccCcccccccccccccchhhhcccccceeeecccccchhhheecc---chhheeehhhhc--cccccccccee-eecc
Confidence 99999999988887632 25899999999944444 3456777765 566777776664 10111111111 0000
Q ss_pred cCcCCh-------------------h-------------hHHHHHHHHHHHHH-hc-C-ee-EEccCeEEEEeCCCCCCH
Q psy2719 703 YRETPI-------------------E-------------RREYIIDRASQIFL-EA-G-FE-PHNALMAIEAKPPVKWDQ 746 (808)
Q Consensus 703 ~~~~~~-------------------~-------------~~~~~~~~~~~~~~-~~-~-~~-v~~g~~~vEv~p~~~v~K 746 (808)
..... . ...+...++.+.+. .+ + +. +.++..++||.|+ ++||
T Consensus 110 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~-~vsK 187 (254)
T PF08282_consen 110 -ENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSSPYFLEITPK-GVSK 187 (254)
T ss_dssp -STTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEET-TSSH
T ss_pred -cccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEecccceEEeeC-CCCH
Confidence 00000 0 00112233333222 22 2 23 4578899999998 9999
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|.|++.|+++ +|++.+ ++++|| |++||+.+ |++|+|+| .+++|.+|+++++++
T Consensus 188 ~~ai~~l~~~-~~i~~~---~~~~~GD~~ND~~Ml~~~---~~~~am~na~~~~k~~a~~i~~~~ 245 (254)
T PF08282_consen 188 GSAIKYLLEY-LGISPE---DIIAFGDSENDIEMLELA---GYSVAMGNATPELKKAADYITPSN 245 (254)
T ss_dssp HHHHHHHHHH-HTTSGG---GEEEEESSGGGHHHHHHS---SEEEEETTS-HHHHHHSSEEESSG
T ss_pred HHHHHHHhhh-cccccc---eeEEeecccccHhHHhhc---CeEEEEcCCCHHHHHhCCEEecCC
Confidence 9999999986 899875 899999 99999999 45699997 589999999999875
No 42
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.87 E-value=4.7e-21 Score=221.03 Aligned_cols=201 Identities=17% Similarity=0.198 Sum_probs=155.5
Q ss_pred cCeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
+....++.++|||||++.|.+.... ....+.++|+++||+.+.||++.+++|++.+.++.|++ .|+++|.+.
T Consensus 263 g~~~~ki~vIpNgid~~~f~~~~~~----~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~ 334 (475)
T cd03813 263 GADPEKIRVIPNGIDPERFAPARRA----RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD 334 (475)
T ss_pred CCCHHHeEEeCCCcCHHHcCCcccc----ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC
Confidence 4455678999999999988764321 01146789999999999999999999999998888875 477777432
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
.+ .++.+++++++.+++.. +.+.|.| .+++..+|+.||++|+||..||||++++|||||+ .
T Consensus 335 -~~----~~~~~e~~~li~~l~l~-------~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~ 395 (475)
T cd03813 335 -ED----PEYAEECRELVESLGLE-------DNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----I 395 (475)
T ss_pred -cC----hHHHHHHHHHHHHhCCC-------CeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----C
Confidence 11 24556777777776532 2344556 5788999999999999999999999999999996 5
Q ss_pred eEEEcCCCCCccccC---------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhc-CCHHHHHHHHHHH
Q psy2719 437 VLILSPFAGAGGMMH---------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQ-LDVNHWMNSFLSS 505 (808)
Q Consensus 437 ~vVlS~~~G~~~~l~---------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~~ 505 (808)
|+|+|+.+|+.+.+. .|++++|.|++++|++|.++++. ++.+.+..+++++++.+ ++++..+++|.+.
T Consensus 396 PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~l 473 (475)
T cd03813 396 PVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRRL 473 (475)
T ss_pred CEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 689999888877763 48999999999999999999984 55666666677777765 4777777777653
No 43
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.87 E-value=5.3e-21 Score=215.84 Aligned_cols=202 Identities=15% Similarity=0.232 Sum_probs=154.3
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
...++.++|+|+|.+.|.+.... ..+++++|+++||+.+.||++.+++|+..+.++.|++ .|+++|.+
T Consensus 166 ~~~k~~vi~ngvd~~~f~~~~~~-----~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~g--- 233 (398)
T cd03796 166 DPERVSVIPNAVDSSDFTPDPSK-----RDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNV----RFIIGGDG--- 233 (398)
T ss_pred ChhhEEEEcCccCHHHcCCCccc-----CCCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCE----EEEEEeCC---
Confidence 34678899999999988753221 1146789999999999999999999999998888875 47777742
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
+.. +++++++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||||++++|||||+ .||
T Consensus 234 --~~~----~~l~~~~~~~~l-------~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G----~PV 296 (398)
T cd03796 234 --PKR----ILLEEMREKYNL-------QDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCG----LLV 296 (398)
T ss_pred --chH----HHHHHHHHHhCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcC----CCE
Confidence 222 334455544432 133445699999999999999999999999999999999999996 568
Q ss_pred EEcCCCCCccccC-c-eEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH-HHhcCCHHHHHHHHHHHHHcccc
Q psy2719 439 ILSPFAGAGGMMH-E-ALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRH-REQQLDVNHWMNSFLSSMGALDN 511 (808)
Q Consensus 439 VlS~~~G~~~~l~-~-~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~~ 511 (808)
|+|..+|..+.+. + +++++| |.++++++|.+++.++.+.+ ....+.++ ..+.+++..-++++++..+++..
T Consensus 297 I~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~-~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 297 VSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISILRTGK-HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred EECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhChhhhh-hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 9999988888774 3 445554 99999999999998654333 33344444 44678999999999988887644
No 44
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.86 E-value=5.3e-21 Score=197.26 Aligned_cols=198 Identities=15% Similarity=0.175 Sum_probs=134.1
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
++|++|+||||++ +++.+++++.++|++|++. |+.
T Consensus 2 k~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~----------------------------------------g~~ 36 (215)
T TIGR01487 2 KLVAIDIDGTLTE-----PNRMISERAIEAIRKAEKK----------------------------------------GIP 36 (215)
T ss_pred cEEEEecCCCcCC-----CCcccCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 5899999999997 3457999999999999887 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEE
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTF 701 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~ 701 (808)
|+|+|||++..+..++.. .+.++|++||++++..++.....+....|...... ...+... ...... ......+
T Consensus 37 ~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~--~~~~~~~ 111 (215)
T TIGR01487 37 VSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEK-KKRFPRD--RLSNEY--PRASLVI 111 (215)
T ss_pred EEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhh-hhhhhhh--hccccc--ceeEEEE
Confidence 999999999988877642 12368999999999865443333322222110000 0000000 000000 0111111
Q ss_pred EcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHH
Q psy2719 702 HYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAM 777 (808)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf 777 (808)
.....+ .+.+.+.+...++.+..+..++||.|+ +++||.|+++++++ +|++.+ ++++|| |++||
T Consensus 112 ~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~-~~i~~~---~~i~iGDs~ND~~ml 179 (215)
T TIGR01487 112 MREGKD-------VDEVREIIKERGLNLVDSGFAIHIMKK-GVDKGVGVEKLKEL-LGIKPE---EVAAIGDSENDIDLF 179 (215)
T ss_pred ecCCcc-------HHHHHHHHHhCCeEEEecCceEEEecC-CCChHHHHHHHHHH-hCCCHH---HEEEECCCHHHHHHH
Confidence 111111 123333444456666555678999998 99999999999997 898864 799999 99999
Q ss_pred HhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 778 LALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 778 ~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 180 ~~ag---~~vam~na~~~~k~~A~~v~~~~ 206 (215)
T TIGR01487 180 RVVG---FKVAVANADDQLKEIADYVTSNP 206 (215)
T ss_pred HhCC---CeEEcCCccHHHHHhCCEEcCCC
Confidence 9994 5599997 589999999999865
No 45
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.86 E-value=6.8e-21 Score=214.79 Aligned_cols=207 Identities=17% Similarity=0.166 Sum_probs=153.6
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcC-ccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDR-LDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVP 355 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~R-l~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~ 355 (808)
.++.++|+|||++.|.+........... .+.++|+++|| +.+.||++.+++|+..+.++.|+++ |+++|..
T Consensus 177 ~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~ 252 (396)
T cd03818 177 SRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGD 252 (396)
T ss_pred cceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCC
Confidence 5788999999999997653221111111 36788999998 9999999999999999998888764 8878853
Q ss_pred CCCChH--HH-HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhcc
Q psy2719 356 SRTDVL--EY-KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQI 432 (808)
Q Consensus 356 ~~~~~~--~~-~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~ 432 (808)
....+. +. +.+++ ++..+++.+.+ . +.+.|.|.++.+++.++|+.||++++||..||||++++|||||+
T Consensus 253 ~~~~g~~~~~~~~~~~---~~~~~~~~~~~---~-~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G- 324 (396)
T cd03818 253 GVSYGAPPPDGESWKQ---HMLDELGGRLD---L-SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG- 324 (396)
T ss_pred CcccCCCCCCcccHHH---HHHHHhhcccC---c-ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC-
Confidence 211000 00 01222 22222322111 1 23456799999999999999999999999999999999999996
Q ss_pred CCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhc-CCHHHHHHHHH
Q psy2719 433 REPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQ-LDVNHWMNSFL 503 (808)
Q Consensus 433 ~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l 503 (808)
.|+|+|+.+|..+.+. +|++|+|.|++++|++|.+++++ ++++.+..+++++++.+ ++++.-+++|+
T Consensus 325 ---~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 325 ---CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDD-PARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred ---CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 5699999988888874 59999999999999999999985 45666667778888876 78777777665
No 46
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.86 E-value=9.8e-21 Score=217.96 Aligned_cols=196 Identities=17% Similarity=0.226 Sum_probs=153.2
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhc-----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~-----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
..++.++|+|||.+.|.+.... ...+.+ +++++|+++||+.+.||++.+++|++++ |+ +.|+++|.
T Consensus 228 ~~kv~vi~nGvd~~~f~p~~~~-~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~----~~----~~l~ivG~ 298 (465)
T PLN02871 228 ANRIRVWNKGVDSESFHPRFRS-EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL----PG----ARLAFVGD 298 (465)
T ss_pred cCeEEEeCCccCccccCCcccc-HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhC----CC----cEEEEEeC
Confidence 4678899999999999764322 122211 3678999999999999999999988653 54 45887773
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
++. ++++++++... +| .|.|.++.+++..+|+.||+||+||..||||++++|||||+
T Consensus 299 -----G~~----~~~l~~~~~~~----------~V-~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G--- 355 (465)
T PLN02871 299 -----GPY----REELEKMFAGT----------PT-VFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG--- 355 (465)
T ss_pred -----ChH----HHHHHHHhccC----------Ce-EEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcC---
Confidence 222 34445554321 34 45799999999999999999999999999999999999996
Q ss_pred CceEEEcCCCCCccccC------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH-HH
Q psy2719 435 PGVLILSPFAGAGGMMH------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS-MG 507 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~-l~ 507 (808)
.|+|+|..+|..+.+. +|++++|.|++++|++|.++++. ++.+.++.+++++++++++|...++++++. -.
T Consensus 356 -~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~ 433 (465)
T PLN02871 356 -VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMGAAAREEVEKWDWRAATRKLRNEQYS 433 (465)
T ss_pred -CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5699999988877763 39999999999999999999974 556666667788888999999999999874 44
Q ss_pred cc
Q psy2719 508 AL 509 (808)
Q Consensus 508 ~~ 509 (808)
++
T Consensus 434 ~~ 435 (465)
T PLN02871 434 AA 435 (465)
T ss_pred HH
Confidence 43
No 47
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.86 E-value=7e-21 Score=203.45 Aligned_cols=207 Identities=14% Similarity=0.142 Sum_probs=140.7
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.|+|++|+||||++ +++.++++++++|++++++ |+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~~~~~----------------------------------------G~ 37 (272)
T PRK10530 3 YRVIALDLDGTLLT-----PKKTILPESLEALARAREA----------------------------------------GY 37 (272)
T ss_pred ccEEEEeCCCceEC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 46999999999998 3457999999999999998 99
Q ss_pred eEEEEeCCChhhHHHhcCc--cceEEEcccceeEecC-CCc-eeecCCChhHHHHHHHHHHHHHhhc-----c-CCCcEE
Q psy2719 623 NIGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHP-DGT-KFVHPVPKEYAEKLRQLIKALQDEV-----C-HDGAWI 692 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~-~~~-~~~~~~~~~~~~~v~~i~~~~~~~~-----~-~~g~~i 692 (808)
.|+|+|||++..+...+.. ...++|++||+.+++. ++. .+..+++.+ .+.++++.+.+.- . ..+.+.
T Consensus 38 ~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~ 114 (272)
T PRK10530 38 KVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPVQ---QALQVIEMLDEHQIHGLMYVDDAMLY 114 (272)
T ss_pred EEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCHH---HHHHHHHHHHhCCcEEEEEcCCceEe
Confidence 9999999999988777642 1246899999999964 333 455677765 5666766665430 0 011111
Q ss_pred EecCc----------EEEE----EcCcCChhhHH------------------HHHHHHH-HHHHhcCeeE-EccCeEEEE
Q psy2719 693 ENKGV----------LLTF----HYRETPIERRE------------------YIIDRAS-QIFLEAGFEP-HNALMAIEA 738 (808)
Q Consensus 693 e~k~~----------~~~~----~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~v-~~g~~~vEv 738 (808)
..... .+.. .+...++ ..+ +..+.+. .+.+.+++.+ .++..++||
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei 193 (272)
T PRK10530 115 EHPTGHVIRTLNWAQTLPPEQRPTFTQVDS-LAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDI 193 (272)
T ss_pred cCchHHHHHHhhhhhccchhcccceEEccc-HHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEE
Confidence 11000 0000 0000000 000 0111111 2223345443 345578999
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 739 KPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 739 ~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.|+ +++||.|+++++++ +|++.+ ++++|| |++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 194 ~~~-~~~K~~~l~~l~~~-~gi~~~---e~i~~GD~~NDi~m~~~ag---~~vamgna~~~lk~~Ad~v~~~n 258 (272)
T PRK10530 194 ARK-GNSKGKRLTQWVEA-QGWSMK---NVVAFGDNFNDISMLEAAG---LGVAMGNADDAVKARADLVIGDN 258 (272)
T ss_pred ecC-CCChHHHHHHHHHH-cCCCHH---HeEEeCCChhhHHHHHhcC---ceEEecCchHHHHHhCCEEEecC
Confidence 998 99999999999997 899875 799999 999999995 4599997 588999999999876
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.86 E-value=4.5e-21 Score=198.99 Aligned_cols=196 Identities=15% Similarity=0.187 Sum_probs=132.9
Q ss_pred EEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeEE
Q psy2719 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIG 625 (808)
Q Consensus 546 i~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~ 625 (808)
|++|+||||++ +...++++++++|++|++. |+.|+
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------Gi~~~ 35 (225)
T TIGR01482 1 IASDIDGTLTD-----PNRAINESALEAIRKAESV----------------------------------------GIPVV 35 (225)
T ss_pred CeEeccCccCC-----CCcccCHHHHHHHHHHHHC----------------------------------------CCEEE
Confidence 58999999998 3357999999999999987 99999
Q ss_pred EEeCCChhhHHHhcC-c-cceEEEcccceeEecCCC--ceeecCCChhHHHHHHH-HHHHHHhhccCCCcEEEecCcEEE
Q psy2719 626 IISGRTLENLMKMVN-I-EKVTYAGSHGLEILHPDG--TKFVHPVPKEYAEKLRQ-LIKALQDEVCHDGAWIENKGVLLT 700 (808)
Q Consensus 626 I~SGR~~~~l~~~~~-~-~~~~li~~nG~~i~~~~~--~~~~~~~~~~~~~~v~~-i~~~~~~~~~~~g~~ie~k~~~~~ 700 (808)
++|||+...+.+++. + ...++|++||+.++..++ ..+...++..|...... ....+... .. .+.. .....
T Consensus 36 ~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~--~~~~~ 110 (225)
T TIGR01482 36 LVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTFPFSRL--KV-QYPR--RASLV 110 (225)
T ss_pred EEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcccchhhh--cc-cccc--ccceE
Confidence 999999998777653 1 245799999999987653 34555566554332111 10001000 00 0000 01111
Q ss_pred EEcCcCChhhHHHHHHHHHHHHHhcC--eeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CH
Q psy2719 701 FHYRETPIERREYIIDRASQIFLEAG--FEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NE 774 (808)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~ 774 (808)
......++ +.+.+.++.++ +.+.++..++||+|+ ++|||.|+++++++ +|++.+ ++++|| |+
T Consensus 111 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~-~~i~~~---~~i~~GD~~NDi 178 (225)
T TIGR01482 111 KMRYGIDV-------DTVREIIKELGLNLVAVDSGFDIHILPQ-GVNKGVAVKKLKEK-LGIKPG---ETLVCGDSENDI 178 (225)
T ss_pred EEeecCCH-------HHHHHHHHhcCceEEEecCCcEEEEeeC-CCCHHHHHHHHHHH-hCCCHH---HEEEECCCHhhH
Confidence 11111121 11222333333 333355679999998 99999999999997 899865 799999 99
Q ss_pred HHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 775 DAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 775 ~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+||+.++ ++|||+| .+++|+.|+||++++
T Consensus 179 ~m~~~ag---~~vam~Na~~~~k~~A~~vt~~~ 208 (225)
T TIGR01482 179 DLFEVPG---FGVAVANAQPELKEWADYVTESP 208 (225)
T ss_pred HHHHhcC---ceEEcCChhHHHHHhcCeecCCC
Confidence 9999994 5599998 589999999999876
No 49
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.86 E-value=1.7e-20 Score=216.71 Aligned_cols=201 Identities=15% Similarity=0.193 Sum_probs=147.3
Q ss_pred eEEEEEEeecCcCccccchhhcCc-----------------hhhhhc------CCCeEEEEEcCccccCChHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA-----------------PENLKD------ENLKVILGVDRLDYTKGLVHRIKAFER 335 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~-----------------~~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~ 335 (808)
+..++.+||||||.+.|.+..... ..++++ .++++|+++||+.+.||++.+++|+++
T Consensus 241 ~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 320 (476)
T cd03791 241 RAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPE 320 (476)
T ss_pred ccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHH
Confidence 356899999999999987643210 011111 467899999999999999999999999
Q ss_pred HHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC
Q psy2719 336 LLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP 415 (808)
Q Consensus 336 ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S 415 (808)
+.++. +.|+++|.+. + .+++++++++.+.. ..++++.+. +.+++..+|+.||++++||
T Consensus 321 l~~~~------~~lvi~G~g~----~---~~~~~~~~~~~~~~--------~~v~~~~~~-~~~~~~~~~~~aDv~l~pS 378 (476)
T cd03791 321 LLELG------GQLVILGSGD----P---EYEEALRELAARYP--------GRVAVLIGY-DEALAHLIYAGADFFLMPS 378 (476)
T ss_pred HHHcC------cEEEEEecCC----H---HHHHHHHHHHHhCC--------CcEEEEEeC-CHHHHHHHHHhCCEEECCC
Confidence 87653 4577777531 1 34455566554431 145555554 5777889999999999999
Q ss_pred CCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---------ceEEECCCCHHHHHHHHHHHhCCC--HHHHHHHHH
Q psy2719 416 LRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---------EALLVNPYEIDAAANVLHRALCMP--RDERELRMS 484 (808)
Q Consensus 416 ~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---------~~llvnP~d~~~lA~ai~~~L~~~--~~e~~~r~~ 484 (808)
.+||||++.+|||+|+ .|+|+|+.+|..+.+. +|++|+|.|+++++++|.+++++. ++++.+..+
T Consensus 379 ~~E~~gl~~lEAma~G----~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 379 RFEPCGLTQMYAMRYG----TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred CCCCCcHHHHHHhhCC----CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 9999999999999995 5689999999988883 599999999999999999998642 233333333
Q ss_pred HHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 485 QLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 485 ~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
+.. ...++|+.-++++++..+
T Consensus 455 ~~~--~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 455 NAM--AQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHh--ccCCChHHHHHHHHHHHh
Confidence 222 235788888887776543
No 50
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.86 E-value=2.1e-20 Score=209.51 Aligned_cols=207 Identities=17% Similarity=0.199 Sum_probs=157.5
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
...++.++|+|+|++.|.+... ...+++ .++++|+++||+.+.||++.+++|++++. ++ +.|+++|.
T Consensus 167 ~~~~i~vi~ng~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~---~~----~~l~i~g~ 237 (388)
T TIGR02149 167 DPEKVHVIYNGIDTKEYKPDDG--NVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDAVHYIP---KD----VQVVLCAG 237 (388)
T ss_pred CcceEEEecCCCChhhcCCCch--HHHHHHhCCCCCceEEEEEcccccccCHHHHHHHHHHHh---hc----CcEEEEeC
Confidence 3467889999999988865321 122222 46679999999999999999999999874 23 33666653
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
+.. . .++.+++++++..++... ..++++.+.++.+++..+|+.||++|+||..||||++++|||||+
T Consensus 238 g~~--~---~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G--- 304 (388)
T TIGR02149 238 APD--T---PEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACG--- 304 (388)
T ss_pred CCC--c---HHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcC---
Confidence 321 1 234455555555543321 246778889999999999999999999999999999999999995
Q ss_pred CceEEEcCCCCCccccC---ceEEECCCCH------HHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHH
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPYEI------DAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLS 504 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~d~------~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~ 504 (808)
.|+|+|..+|..+.+. +|++++|.|. ++++++|.++++. ++++.++..++++.+ +.++|+..++++++
T Consensus 305 -~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 382 (388)
T TIGR02149 305 -TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVE 382 (388)
T ss_pred -CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 5699999988887773 4999999999 9999999999974 555555556666655 56899999999988
Q ss_pred HHHcc
Q psy2719 505 SMGAL 509 (808)
Q Consensus 505 ~l~~~ 509 (808)
.++++
T Consensus 383 ~y~~~ 387 (388)
T TIGR02149 383 MYRKV 387 (388)
T ss_pred HHHhh
Confidence 77653
No 51
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.86 E-value=1.6e-20 Score=199.07 Aligned_cols=206 Identities=14% Similarity=0.205 Sum_probs=142.7
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
+|++|+||||++. ...++++++++|++|+++ |+.|
T Consensus 1 li~~DlDGTLl~~-----~~~i~~~~~~~i~~l~~~----------------------------------------G~~~ 35 (256)
T TIGR00099 1 LIFIDLDGTLLND-----DHTISPSTKEALAKLREK----------------------------------------GIKV 35 (256)
T ss_pred CEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHC----------------------------------------CCeE
Confidence 5899999999983 357999999999999988 9999
Q ss_pred EEEeCCChhhHHHhcCc--cceEEEcccceeEecCC-CceeecCCChhHHHHHHHHHHHHHhhc------cCCCcEEEec
Q psy2719 625 GIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPD-GTKFVHPVPKEYAEKLRQLIKALQDEV------CHDGAWIENK 695 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~------~~~g~~ie~k 695 (808)
+|+|||++..+...+.. ...++|++||+.++..+ +..+..+++.+ .++++++.+.+.. ...+.++...
T Consensus 36 ~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 112 (256)
T TIGR00099 36 VLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLD---LVEEILNFLKKHGLDVILYGDDSIYASKN 112 (256)
T ss_pred EEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHH---HHHHHHHHHHHcCcEEEEEeCCeEEecCC
Confidence 99999999988877642 22479999999999764 34566788875 5666666665430 0112222111
Q ss_pred CcE-EE----EEcCc---C-C-----hh-h-------HHHHHHHHHHHHHh--c--CeeE-EccCeEEEEeCCCCCCHHH
Q psy2719 696 GVL-LT----FHYRE---T-P-----IE-R-------REYIIDRASQIFLE--A--GFEP-HNALMAIEAKPPVKWDQGR 748 (808)
Q Consensus 696 ~~~-~~----~~~~~---~-~-----~~-~-------~~~~~~~~~~~~~~--~--~~~v-~~g~~~vEv~p~~~v~KG~ 748 (808)
... +. ..+.. . + .+ . .++...++.+.+.. + .+.+ .++..++||+|+ ++|||.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~-~~~K~~ 191 (256)
T TIGR00099 113 DPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSSGPYSIEITAK-GVSKGS 191 (256)
T ss_pred CcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCC-CCChHH
Confidence 000 00 00000 0 0 00 0 01112333333331 2 3544 567789999998 999999
Q ss_pred HHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 749 ASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 749 av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|++.++++ +|++.+ ++++|| |++||+.++ ++++|+| .+++|+.|+|+++++
T Consensus 192 ~i~~~~~~-~~~~~~---~~~~~GD~~nD~~m~~~~~---~~~a~~na~~~~k~~a~~~~~~n 247 (256)
T TIGR00099 192 ALQSLAEA-LGISLE---DVIAFGDGMNDIEMLEAAG---YGVAMGNADEELKALADYVTDSN 247 (256)
T ss_pred HHHHHHHH-cCCCHH---HEEEeCCcHHhHHHHHhCC---ceeEecCchHHHHHhCCEEecCC
Confidence 99999996 899865 799999 999999994 4599997 588999999999875
No 52
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.85 E-value=2e-19 Score=201.63 Aligned_cols=205 Identities=23% Similarity=0.312 Sum_probs=158.1
Q ss_pred EEEEEEeecCcCccccchhhcCchhh--hhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPEN--LKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~--~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
..++.++|+|+|.+.|.+........ ... .++++|+++||+.+.||++.+++|+..+.++.|++ .|+++|.+.
T Consensus 186 ~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~ 261 (398)
T cd03800 186 PRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERA----NLVIVGGPR 261 (398)
T ss_pred ccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHHHHHHHHHHHhCCCe----EEEEEECCC
Confidence 34588999999998886543211101 111 56789999999999999999999999998887765 588888644
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
....+ ....++++++.+.+.. +-+.+.|.++.+++..+|+.||++++||..||||++++|||||+ .
T Consensus 262 ~~~~~---~~~~~~~~~~~~~~~~-------~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~ 327 (398)
T cd03800 262 DDILA---MDEEELRELARELGVI-------DRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACG----L 327 (398)
T ss_pred Ccchh---hhhHHHHHHHHhcCCC-------ceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcC----C
Confidence 32221 2233455555554321 33557799999999999999999999999999999999999996 4
Q ss_pred eEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHH
Q psy2719 437 VLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFL 503 (808)
Q Consensus 437 ~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 503 (808)
|+|+|+.+|..+.+. .|++++|.|+++++++|.+++++ +++++....++++++ +.++++..+++++
T Consensus 328 Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 328 PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 689999988888774 49999999999999999999985 455666666677777 7889999988875
No 53
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.85 E-value=1.2e-19 Score=200.24 Aligned_cols=263 Identities=18% Similarity=0.203 Sum_probs=177.1
Q ss_pred CCCEEEEeccchHHHHHHHHhhc--CCE-EEeccHHH---HHHHH-HHHHHHhCce--ee---cCCeEEEEc-CeEEEEE
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA--YDF-VGFHIEDY---CLNFI-DCCCRRLGSR--VD---RNNMLVELA-GRTVHVK 284 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~--~dl-igf~~~~~---~~~fl-~~~~~~l~~~--~~---~~~~~i~~~-gr~~~v~ 284 (808)
+.|+|++|.+|..++..+++... ..+ +..|.... .+.++ ..+.+..... .+ .+.+ +..+ -...++.
T Consensus 79 ~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~ 157 (360)
T cd04951 79 KPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRLRMLAYRLTDFLSDLTTNVSKEALDYF-IASKAFNANKSF 157 (360)
T ss_pred CCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHHHHHHHHHHhhccCceEEEcHHHHHHH-HhccCCCcccEE
Confidence 37999999999887777665432 222 23343321 11111 1111111110 00 0000 1111 1345788
Q ss_pred EeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 285 ALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 285 v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
++|+|+|...|.+........+++ .++++++++||+.+.||++.+++|+.++.+++|++ .|+++|.+.
T Consensus 158 ~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~----~l~i~G~g~---- 229 (360)
T cd04951 158 VVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDI----KLLIAGDGP---- 229 (360)
T ss_pred EEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCe----EEEEEcCCC----
Confidence 999999998876543211122221 46789999999999999999999999999888765 477777422
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL 440 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl 440 (808)
.. +++++.+.+.+. .+.+.+.|.. +++..+|+.||++++||..||||++++|||||+ .|+|+
T Consensus 230 -~~----~~~~~~~~~~~~-------~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G----~PvI~ 291 (360)
T cd04951 230 -LR----ATLERLIKALGL-------SNRVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACE----LPVVA 291 (360)
T ss_pred -cH----HHHHHHHHhcCC-------CCcEEEeccc--ccHHHHHHhhceEEecccccCCChHHHHHHHcC----CCEEE
Confidence 22 233444444332 1223445654 678999999999999999999999999999996 56899
Q ss_pred cCCCCCccccC-ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 441 SPFAGAGGMMH-EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 441 S~~~G~~~~l~-~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
|+.+|..+.+. +|++++|.|+++++++|.++++++++.+..+..+.....+.++++.+++++++-++
T Consensus 292 ~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 292 TDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred ecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 99888888775 59999999999999999999977766665555543334567899999998887653
No 54
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.85 E-value=9e-21 Score=193.82 Aligned_cols=190 Identities=24% Similarity=0.356 Sum_probs=136.4
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
||++|+||||++.. ...++++++++|++|.++ |+.+
T Consensus 1 li~~D~DgTL~~~~----~~~~~~~~~~~l~~l~~~----------------------------------------g~~~ 36 (204)
T TIGR01484 1 LLFFDLDGTLLDPN----AHELSPETIEALERLREA----------------------------------------GVKV 36 (204)
T ss_pred CEEEeCcCCCcCCC----CCcCCHHHHHHHHHHHHC----------------------------------------CCEE
Confidence 58999999999832 246899999999999988 8999
Q ss_pred EEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeecCCChhHHHHH------HHHHHHHHhhccCCCcEEEecCcE
Q psy2719 625 GIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKL------RQLIKALQDEVCHDGAWIENKGVL 698 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v------~~i~~~~~~~~~~~g~~ie~k~~~ 698 (808)
+|+|||+...+..++...+.+++++||++++.+++..+..+. ..|.+.+ ..++..+.+ ..++..++.+...
T Consensus 37 ~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~~ 113 (204)
T TIGR01484 37 VLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPS-DVFEEILGIKEEIGAELKSLSE--HYVGTFIEDKAIA 113 (204)
T ss_pred EEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEccc-ccHHHHHHhhhhcCceeeeecc--ccccceeecccce
Confidence 999999999998888644578999999999986655554311 1122211 122222332 2567778888999
Q ss_pred EEEEcCcC--ChhhHHHHHHHHHHHHHh-cCeeEE-ccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe--
Q psy2719 699 LTFHYRET--PIERREYIIDRASQIFLE-AGFEPH-NALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-- 772 (808)
Q Consensus 699 ~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~v~-~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-- 772 (808)
+.++|+.. .+.....+...+...... .++.+. ++..++||+|+ +++||.|++.++++ ++++.. ++++||
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~-~~~K~~~~~~~~~~-~~~~~~---~~~~~GD~ 188 (204)
T TIGR01484 114 VAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPA-GVDKGSALQALLKE-LNGKRD---EILAFGDS 188 (204)
T ss_pred eeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecC-CCChHHHHHHHHHH-hCCCHH---HEEEEcCC
Confidence 99998875 111111222222222111 246666 78899999998 99999999999997 787754 799999
Q ss_pred --CHHHHHhccCCccEEEe
Q psy2719 773 --NEDAMLALQGIACTFRV 789 (808)
Q Consensus 773 --D~~Mf~~~~~~~~~vav 789 (808)
|++||+.++ . +|+|
T Consensus 189 ~nD~~~~~~~~-~--~vam 204 (204)
T TIGR01484 189 GNDEEMFEVAG-L--AVAV 204 (204)
T ss_pred HHHHHHHHHcC-C--ceEC
Confidence 999999985 3 4776
No 55
>PHA01633 putative glycosyl transferase group 1
Probab=99.85 E-value=4.3e-20 Score=200.34 Aligned_cols=189 Identities=19% Similarity=0.287 Sum_probs=141.9
Q ss_pred eecCcCccccchhhcCchhhhhc-----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 286 LPIGIPFERFVQLAENAPENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 286 ~p~GID~~~f~~~~~~~~~~~~~-----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
+|+|||++.|.+.....++.+++ .+..+|++|||+++.||++.+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~------ 191 (335)
T PHA01633 118 VFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH------ 191 (335)
T ss_pred eeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH------
Confidence 57899999997643211222221 4567899999999999999999999999999998766677776651
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEc--CCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIF--GCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~--~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
.. +++ ++ .. ..|.++. |.++.+++.++|+.||+||+||..||||++++|||||+ .|+
T Consensus 192 ~~-------~~~----l~----l~--~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----~PV 250 (335)
T PHA01633 192 KQ-------FTQ----LE----VP--ANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----TPV 250 (335)
T ss_pred HH-------HHH----cC----CC--CcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC----CCE
Confidence 11 111 11 11 1355442 67789999999999999999999999999999999996 568
Q ss_pred EEcCCCCCccccC---------------------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHH
Q psy2719 439 ILSPFAGAGGMMH---------------------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNH 497 (808)
Q Consensus 439 VlS~~~G~~~~l~---------------------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~ 497 (808)
|+|+.+|..+..+ .|+++++.|++++|++|.+++.+++++. +..++++.+++++++.
T Consensus 251 Vas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~~--~~~~~~~~a~~f~~~~ 328 (335)
T PHA01633 251 IHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDREE--RSMKLKELAKKYDIRN 328 (335)
T ss_pred EEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChhh--hhHHHHHHHHhcCHHH
Confidence 8898876665422 1567889999999999999988764333 3445678889999988
Q ss_pred HHHHHH
Q psy2719 498 WMNSFL 503 (808)
Q Consensus 498 W~~~~l 503 (808)
-.++|+
T Consensus 329 ~~~~~~ 334 (335)
T PHA01633 329 LYTRFL 334 (335)
T ss_pred HHHHhh
Confidence 887775
No 56
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.85 E-value=1.3e-19 Score=204.62 Aligned_cols=205 Identities=14% Similarity=0.128 Sum_probs=152.0
Q ss_pred CeEEEEEEeecCcCccccchhhcCchhhhh----c--CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEE
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAPENLK----D--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQ 351 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~----~--~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ 351 (808)
-...++.+||||||+++|.+........+. . .+.++|++|+|+.+.||+..+|+|+.+++++.|++ .|++
T Consensus 359 ip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdi----rLvI 434 (578)
T PRK15490 359 LEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPAT----RFVL 434 (578)
T ss_pred CCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCe----EEEE
Confidence 456789999999999998774321111111 1 34578999999999999999999999999988875 4887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhc
Q psy2719 352 ISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 352 ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~ 431 (808)
+|.+ + .++++++++.+.+. .+-+.|.|+ .+++..+|+.||+||+||.+||||++++|||||+
T Consensus 435 VGdG-----~----~~eeLk~la~elgL-------~d~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~G 496 (578)
T PRK15490 435 VGDG-----D----LRAEAQKRAEQLGI-------LERILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVG 496 (578)
T ss_pred EeCc-----h----hHHHHHHHHHHcCC-------CCcEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHhC
Confidence 8742 2 23455666655442 123455676 4689999999999999999999999999999996
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCC--HHHHHHHHHHHhHHH-hcCCHHHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMP--RDERELRMSQLRHRE-QQLDVNHWMNSFLSS 505 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~--~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~ 505 (808)
.|+|+|+.+|..+.+. +|++|+|.|++++++++..+..+. .+.+....+++++++ +.+|++.-++++++.
T Consensus 497 ----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki 572 (578)
T PRK15490 497 ----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKT 572 (578)
T ss_pred ----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 5699999988888773 599999999999998874433221 122333445667766 468999999988887
Q ss_pred HHc
Q psy2719 506 MGA 508 (808)
Q Consensus 506 l~~ 508 (808)
++.
T Consensus 573 ~~~ 575 (578)
T PRK15490 573 IAS 575 (578)
T ss_pred HHh
Confidence 764
No 57
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.85 E-value=7e-20 Score=203.36 Aligned_cols=194 Identities=23% Similarity=0.246 Sum_probs=152.7
Q ss_pred CeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
....++.++|+|+|.+.|.+.... .+.+.|+++||+.+.||++.+++|+..+.+++|++ .|+++|.+
T Consensus 162 ~~~~~i~vi~~g~d~~~~~~~~~~-------~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~ivG~g-- 228 (367)
T cd05844 162 FPPEKVHVHPIGVDTAKFTPATPA-------RRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEV----RLVIIGDG-- 228 (367)
T ss_pred CCHHHeEEecCCCCHHhcCCCCCC-------CCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCe----EEEEEeCc--
Confidence 345678899999999888653211 34568999999999999999999999998887765 47777732
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC------CCCCChhHHHHHHhc
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL------RDGMNLVAKEYVACQ 431 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~------~EG~gLv~~Eama~~ 431 (808)
+ ..+++++++.+.+. .+.+.+.|.++.+++..+|+.||++++||. .||||++++|||||+
T Consensus 229 ---~----~~~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G 294 (367)
T cd05844 229 ---P----LLAALEALARALGL-------GGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASG 294 (367)
T ss_pred ---h----HHHHHHHHHHHcCC-------CCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcC
Confidence 2 23445555555322 133467899999999999999999999997 599999999999995
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFL 503 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 503 (808)
.|+|+|+.+|..+.+. +|++++|.|+++++++|.++++. ++.+.+...++++++ ..++++.+++++.
T Consensus 295 ----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 295 ----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred ----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 5699999988888773 59999999999999999999974 455555566677776 5689998888765
No 58
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.84 E-value=1.1e-19 Score=214.36 Aligned_cols=203 Identities=14% Similarity=0.104 Sum_probs=150.4
Q ss_pred cCeEEEEEEeecCcCccccchhhcCch---hhhhc--CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEE
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAP---ENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQ 351 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~---~~~~~--~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ 351 (808)
+....++.+||||||++.|.+...... ..... .+.++|++|||+++.||++.+|+||.++++++|++ .|++
T Consensus 478 g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~----~LvI 553 (694)
T PRK15179 478 GVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKV----RFIM 553 (694)
T ss_pred CCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCe----EEEE
Confidence 344568999999999988864221111 11111 34678999999999999999999999999998875 4888
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhc
Q psy2719 352 ISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 352 ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~ 431 (808)
+|.+. .++++++++.+.+.. ..+.|.|.. +++..+|+.||+||+||.+||||++++|||||+
T Consensus 554 vG~G~---------~~~~L~~l~~~lgL~-------~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G 615 (694)
T PRK15179 554 VGGGP---------LLESVREFAQRLGMG-------ERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSG 615 (694)
T ss_pred EccCc---------chHHHHHHHHHcCCC-------CcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcC
Confidence 87432 234556666665432 345667875 478999999999999999999999999999995
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCH--HHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEI--DAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSS 505 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~--~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~ 505 (808)
.|||+|..+|..+.+. +|++|+|.|+ ++++++|.+++...... ....+++++++ +.+++..-++++++.
T Consensus 616 ----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~-~~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 616 ----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAAD-PGIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred ----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhcc-HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5689999888888884 4999998885 68999998888653222 22334556666 478888888877765
Q ss_pred H
Q psy2719 506 M 506 (808)
Q Consensus 506 l 506 (808)
.
T Consensus 691 Y 691 (694)
T PRK15179 691 Y 691 (694)
T ss_pred h
Confidence 4
No 59
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.84 E-value=7.8e-20 Score=193.69 Aligned_cols=200 Identities=18% Similarity=0.169 Sum_probs=135.5
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
+|++|+||||++.. ..+.+.++++|++|++. |+.|
T Consensus 1 li~~DlDGTll~~~-----~~~~~~~~~~i~~l~~~----------------------------------------g~~~ 35 (256)
T TIGR01486 1 WIFTDLDGTLLDPH-----GYDWGPAKEVLERLQEL----------------------------------------GIPV 35 (256)
T ss_pred CEEEcCCCCCcCCC-----CcCchHHHHHHHHHHHC----------------------------------------CCeE
Confidence 58999999999832 32344689999999887 9999
Q ss_pred EEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCCc-------eeecCCChhHHHHHHHHHHHHHhhccCCCcEEEe-
Q psy2719 625 GIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDGT-------KFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIEN- 694 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~- 694 (808)
+++|||+...+..++... ..++|++||++|+..++. .....++. +.++++++.+.+.....-.....
T Consensus 36 ~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~---~~~~~il~~~~~~~~~~~~~~~~~ 112 (256)
T TIGR01486 36 IPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPY---EKIRARLEELSEELGFKFRGLGDL 112 (256)
T ss_pred EEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCH---HHHHHHHHHHHHHhCCCccchhhC
Confidence 999999999887776422 257999999999876542 23345554 35667776554320000000000
Q ss_pred ---------------------cCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHH
Q psy2719 695 ---------------------KGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHI 753 (808)
Q Consensus 695 ---------------------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~l 753 (808)
......+.. + .+....+.+.+...++.+..+..++||.|+ +++||.|++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~-~~~Kg~ai~~l 184 (256)
T TIGR01486 113 TDAEIAELTGLSRELAALAQRREYSETILW---S----EERRERFTEALVELGLEVTHGNRFYHVLGA-GSDKGKAANAL 184 (256)
T ss_pred CHHHHHHHhCcCHHHHHHHhhCccCCceec---C----hHHHHHHHHHHHHcCCEEEeCCceEEEecC-CCCHHHHHHHH
Confidence 000000000 1 112333444444445666555579999998 99999999999
Q ss_pred HHHhcCCC--CCcceeEEEEe----CHHHHHhccCCccEEEeCCC----Cccccc--c-ccccCcCC
Q psy2719 754 LRTMYGVD--WSERVRIIYAG----NEDAMLALQGIACTFRVDSS----PTVKSS--W-KQGSNHTM 807 (808)
Q Consensus 754 l~~~~~i~--~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~----~~vk~~--A-~~~~~~~~ 807 (808)
+++ +|++ .+ ++++|| |++||+.++ .+|||+|+ +++|+. | +|+|+++.
T Consensus 185 ~~~-~~i~~~~~---~~~a~GD~~ND~~Ml~~ag---~~vam~Na~~~~~~lk~~~~a~~~vt~~~~ 244 (256)
T TIGR01486 185 KQF-YNQPGGAI---KVVGLGDSPNDLPLLEVVD---LAVVVPGPNGPNVSLKPGDPGSFLLTPAPG 244 (256)
T ss_pred HHH-HhhcCCCc---eEEEEcCCHhhHHHHHHCC---EEEEeCCCCCCccccCccCCCcEEEcCCCC
Confidence 996 8988 54 899999 999999984 56999985 379998 5 59998763
No 60
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.83 E-value=3.8e-20 Score=195.27 Aligned_cols=204 Identities=14% Similarity=0.173 Sum_probs=137.5
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
|.+|++|+||||+++.+ .+..+++++.++++++.++ |+
T Consensus 1 ~~li~tDlDGTLl~~~~--~~~~~~~~~~~~i~~~~~~----------------------------------------gi 38 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD--GDNQALLRLNALLEDHRGE----------------------------------------DS 38 (249)
T ss_pred CeEEEEcCCCcCcCCCC--CChHHHHHHHHHHHHhhcc----------------------------------------Cc
Confidence 46899999999998532 2356789999999999887 89
Q ss_pred eEEEEeCCChhhHHHh---cCcc-ceEEEcccceeEecCCCc----eeecCCChhHH-HHHHHHHHHHHhhccCCCcEEE
Q psy2719 623 NIGIISGRTLENLMKM---VNIE-KVTYAGSHGLEILHPDGT----KFVHPVPKEYA-EKLRQLIKALQDEVCHDGAWIE 693 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~---~~~~-~~~li~~nG~~i~~~~~~----~~~~~~~~~~~-~~v~~i~~~~~~~~~~~g~~ie 693 (808)
.++++|||++..+..+ ++.. +..+|++||+.|+.++.. .|...+...|. +.+..+...+... +.....+
T Consensus 39 ~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~ 116 (249)
T TIGR01485 39 LLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIVVAITDKFEEL--KPQPDLE 116 (249)
T ss_pred eEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHHHHHHhcCccc--ccCCccc
Confidence 9999999999888777 3432 235889999999875421 11111111222 1233333333222 2333334
Q ss_pred ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcC--eeE-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEE
Q psy2719 694 NKGVLLTFHYRETPIERREYIIDRASQIFLEAG--FEP-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIY 770 (808)
Q Consensus 694 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via 770 (808)
.+...+.+.+.. +...+..+++.+.+...+ +.+ .++..++||+|+ +++||.|+++++++ +|++.+ ++++
T Consensus 117 ~~~~k~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~-~~~K~~al~~l~~~-~~i~~~---~~i~ 188 (249)
T TIGR01485 117 QRPHKVSFFLDP---EAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQ-GSGKGQALQYLLQK-LAMEPS---QTLV 188 (249)
T ss_pred cCCeeEEEEech---hhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeC-CCChHHHHHHHHHH-cCCCcc---CEEE
Confidence 445556655322 111223455565555543 333 577889999998 99999999999996 898865 7999
Q ss_pred Ee----CHHHHHhccCCccEEEeCC-CCccccccc
Q psy2719 771 AG----NEDAMLALQGIACTFRVDS-SPTVKSSWK 800 (808)
Q Consensus 771 ~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~ 800 (808)
|| |++||+.++ +.+|+|+| .+++|+.|+
T Consensus 189 ~GD~~ND~~ml~~~~--~~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 189 CGDSGNDIELFEIGS--VRGVIVSNAQEELLQWYD 221 (249)
T ss_pred EECChhHHHHHHccC--CcEEEECCCHHHHHHHHH
Confidence 99 999999864 34599998 478887654
No 61
>PLN02949 transferase, transferring glycosyl groups
Probab=99.83 E-value=1.9e-19 Score=205.34 Aligned_cols=208 Identities=15% Similarity=0.174 Sum_probs=158.1
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++++|+|.+.|...... ...+++++++|||+.+.||+..+|+||++++++.++-..++.|+++|... .
T Consensus 243 ~~i~vvyp~vd~~~~~~~~~~-----~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~-~-- 314 (463)
T PLN02949 243 ERIKRVYPPCDTSGLQALPLE-----RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCR-N-- 314 (463)
T ss_pred CCeEEEcCCCCHHHcccCCcc-----ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCC-C--
Confidence 357788999998776322110 01345789999999999999999999999887544322345688888542 1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL 440 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl 440 (808)
++..++.+++++++.+.+.. ..+.|.|.++.+++.++|+.||+++.||..||||++++|||||+ .|+|+
T Consensus 315 ~~~~~~~~eL~~la~~l~L~-------~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G----~PVIa 383 (463)
T PLN02949 315 KEDEERLQKLKDRAKELGLD-------GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAG----AVPIA 383 (463)
T ss_pred cccHHHHHHHHHHHHHcCCC-------CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcC----CcEEE
Confidence 11223445666666665432 23455699999999999999999999999999999999999995 56999
Q ss_pred cCCCCCcc-ccC------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 441 SPFAGAGG-MMH------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 441 S~~~G~~~-~l~------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
|..+|..+ .+. +|++++ |++++|++|.++++++++++.+..+++++++.+++++.-++++++.+...
T Consensus 384 ~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 384 HNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred eCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99888653 332 377774 99999999999999877777777778888899999999999888887764
No 62
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.83 E-value=1.3e-19 Score=200.26 Aligned_cols=175 Identities=22% Similarity=0.220 Sum_probs=131.4
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhh--c-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLK--D-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~--~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
..++.++|+|+|.+.|.+.........+ . .++++|+++||+.+.||++.+++|+..+.+++|++ .++++|.+
T Consensus 158 ~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~----~l~ivG~g- 232 (358)
T cd03812 158 NKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNA----KLLLVGDG- 232 (358)
T ss_pred cccEEEEeccCcHHHcCCCchhhhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhCCCe----EEEEEeCC-
Confidence 4678899999999887653221111111 1 56789999999999999999999999999888875 47777742
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
+.. +.+++++.+.+. .+.+.+.|. .+++..+|+.||++|+||..||||++++|||||+ .
T Consensus 233 ----~~~----~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G----~ 291 (358)
T cd03812 233 ----ELE----EEIKKKVKELGL-------EDKVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASG----L 291 (358)
T ss_pred ----chH----HHHHHHHHhcCC-------CCcEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhC----C
Confidence 222 233344433321 223445565 5789999999999999999999999999999995 5
Q ss_pred eEEEcCCCCCccccCc--eEEECCCCHHHHHHHHHHHhCCCHHHHH
Q psy2719 437 VLILSPFAGAGGMMHE--ALLVNPYEIDAAANVLHRALCMPRDERE 480 (808)
Q Consensus 437 ~vVlS~~~G~~~~l~~--~llvnP~d~~~lA~ai~~~L~~~~~e~~ 480 (808)
|+|+|+.+|..+.+.+ +++..+.+++++|++|.++++.+...+.
T Consensus 292 PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~ 337 (358)
T cd03812 292 PCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERS 337 (358)
T ss_pred CEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhhh
Confidence 6999999998887753 6666667789999999999998764443
No 63
>PTZ00174 phosphomannomutase; Provisional
Probab=99.83 E-value=1.7e-19 Score=189.94 Aligned_cols=204 Identities=20% Similarity=0.273 Sum_probs=130.8
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
+.++|++|+||||++ ++..++++++++|++++++ |
T Consensus 4 ~~klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~----------------------------------------G 38 (247)
T PTZ00174 4 KKTILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSK----------------------------------------G 38 (247)
T ss_pred CCeEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHC----------------------------------------C
Confidence 357999999999998 4467999999999999998 9
Q ss_pred CeEEEEeCCChhhHHHhcCcc---c-eEEEcccceeEecCCCceeecC----CChhHHHHHHHHHHHHHhh---c---cC
Q psy2719 622 VNIGIISGRTLENLMKMVNIE---K-VTYAGSHGLEILHPDGTKFVHP----VPKEYAEKLRQLIKALQDE---V---CH 687 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~~---~-~~li~~nG~~i~~~~~~~~~~~----~~~~~~~~v~~i~~~~~~~---~---~~ 687 (808)
+.|+|+|||++..+.+.++.. . .++|++||+.|+..++..+.++ ++.+ .+.++++...+. . ..
T Consensus 39 i~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~~~i~~~~i~~~l~~~---~~~~i~~~~~~~~~~~~~~~~ 115 (247)
T PTZ00174 39 FKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDGELFHSQSILKFLGEE---KLKKFINFCLRYIADLDIPVK 115 (247)
T ss_pred CEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECCeEEEEEcchhcCCHH---HHHHHHHHHHHHHHhcCCccc
Confidence 999999999999998887632 2 3679999999987544444454 3444 344444433221 1 12
Q ss_pred CCcEEEecCcEEEEEcC--cCChhhH---------HHHHHHHHHHH-Hhc---CeeEE-ccCeEEEEeCCCCCCHHHHHH
Q psy2719 688 DGAWIENKGVLLTFHYR--ETPIERR---------EYIIDRASQIF-LEA---GFEPH-NALMAIEAKPPVKWDQGRASI 751 (808)
Q Consensus 688 ~g~~ie~k~~~~~~~~~--~~~~~~~---------~~~~~~~~~~~-~~~---~~~v~-~g~~~vEv~p~~~v~KG~av~ 751 (808)
.+.+++.........+. ....... .+....+.+.+ ..+ .+... ++..++||+|+ ++|||+||+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~-gvsKg~al~ 194 (247)
T PTZ00174 116 RGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPK-GWDKTYCLR 194 (247)
T ss_pred eeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeC-CCcHHHHHH
Confidence 23444322211111110 0000000 01112222222 222 22233 34579999998 999999999
Q ss_pred HHHHHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCC-CCccccccccccC
Q psy2719 752 HILRTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN 804 (808)
Q Consensus 752 ~ll~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~ 804 (808)
.|+++ . + +|+||| |++||+.++..| +.|+| .+.+|..|..+++
T Consensus 195 ~L~~~-~----~---eviafGD~~~~~~NDieMl~~~~~~g--~~v~n~~~~~~~~~~~~~~ 246 (247)
T PTZ00174 195 HLEND-F----K---EIHFFGDKTFEGGNDYEIYNDPRTIG--HSVKNPEDTIKILKELFLK 246 (247)
T ss_pred HHHhh-h----h---hEEEEcccCCCCCCcHhhhhcCCCce--EEeCCHHHHHHHHHHHhcC
Confidence 99986 2 2 799999 599999876455 55666 5789998876654
No 64
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.82 E-value=9.9e-19 Score=197.49 Aligned_cols=284 Identities=15% Similarity=0.158 Sum_probs=174.2
Q ss_pred CCCEEEEeccchHHHHHHHHhhc---CCEEEeccHHHHHH------------------------------HHHHH-----
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA---YDFVGFHIEDYCLN------------------------------FIDCC----- 259 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~---~dligf~~~~~~~~------------------------------fl~~~----- 259 (808)
+.|+++.|||+.......+|+.. +-+..+|...+-|+ .+...
T Consensus 148 ~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~A 227 (590)
T cd03793 148 PAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCA 227 (590)
T ss_pred CCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhhC
Confidence 58999999999999999998654 22334444443332 11110
Q ss_pred HHHhC-ceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcC----------chh-----hhhc----CCCeEEEE-Ec
Q psy2719 260 CRRLG-SRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAEN----------APE-----NLKD----ENLKVILG-VD 318 (808)
Q Consensus 260 ~~~l~-~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~----------~~~-----~~~~----~~~~iil~-V~ 318 (808)
++++. ++.++..+ ..+.+++..+ |+|||||++.|.+..+. ..+ +++. .+++++++ +|
T Consensus 228 d~fttVS~it~~E~-~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~G 305 (590)
T cd03793 228 HVFTTVSEITAYEA-EHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAG 305 (590)
T ss_pred CEEEECChHHHHHH-HHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEee
Confidence 01110 11111111 1123444333 89999999998764311 001 1221 36788888 89
Q ss_pred Cccc-cCChHHHHHHHHHHHHhCCCcc-CcEEEEEEEcCCCCC---------hHHHHHHHHHHHHHHHHHhcc-------
Q psy2719 319 RLDY-TKGLVHRIKAFERLLEKHPEYV-EKVTFLQISVPSRTD---------VLEYKALKDEMDQLVGRINGR------- 380 (808)
Q Consensus 319 Rl~~-~KGi~~~l~A~~~ll~~~p~~~-~~v~lv~ig~~~~~~---------~~~~~~l~~~l~~lv~~in~~------- 380 (808)
|+++ .||++.+|+|+.++-..-..-. +..|+..+..|+..+ .+-.++|++.++++..+|+.+
T Consensus 306 R~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~ 385 (590)
T cd03793 306 RYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALK 385 (590)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhc
Confidence 9999 9999999999998865211111 122333344455433 122345666666665555544
Q ss_pred -------------------------------------------------------C-CCCCCccEEEEcCCCCH------
Q psy2719 381 -------------------------------------------------------F-SKPNWSPIRYIFGCIGQ------ 398 (808)
Q Consensus 381 -------------------------------------------------------~-g~~~~~~v~~~~~~v~~------ 398 (808)
| +..+...|+|...+++.
T Consensus 386 ~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g 465 (590)
T cd03793 386 GKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLG 465 (590)
T ss_pred cCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCC
Confidence 0 01122344444444432
Q ss_pred HHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCc----cccC----ceEEEC-------CCCHHH
Q psy2719 399 EELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAG----GMMH----EALLVN-------PYEIDA 463 (808)
Q Consensus 399 ~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~----~~l~----~~llvn-------P~d~~~ 463 (808)
.+...+|+.||+||+||++||||++++|||||+ .|+|+|..+|.. +.+. .|++|. +.++++
T Consensus 466 ~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~ 541 (590)
T cd03793 466 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQ 541 (590)
T ss_pred cchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHH
Confidence 347788999999999999999999999999995 569999999883 3333 378887 566889
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 464 AANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 464 lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
++++|.+.++++..++........+....++|.+-+..|++.-.
T Consensus 542 La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 542 LTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999976544433333333355667788887777766543
No 65
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.82 E-value=7.4e-19 Score=195.46 Aligned_cols=200 Identities=16% Similarity=0.204 Sum_probs=148.9
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
...++.++|+|+|...|.+.... ..+++ .++++++++||+.+.||++.+++|+.++.++ ++ +.|+++|.
T Consensus 163 ~~~~i~vi~n~~~~~~~~~~~~~--~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~-~~----~~l~i~G~ 235 (371)
T cd04962 163 ITKEIEVIPNFVDEDRFRPKPDE--ALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRKE-VP----ARLLLVGD 235 (371)
T ss_pred CcCCEEEecCCcCHhhcCCCchH--HHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHHHHhc-CC----ceEEEEcC
Confidence 34578899999998877653221 12111 5678999999999999999999999988655 33 34777764
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
+. +. +++++++.+.+. .+.+.+.|.. +++..+|+.||++++||..||||++++|||+|+
T Consensus 236 g~-----~~----~~~~~~~~~~~~-------~~~v~~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g--- 294 (371)
T cd04962 236 GP-----ER----SPAERLARELGL-------QDDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACG--- 294 (371)
T ss_pred Cc-----CH----HHHHHHHHHcCC-------CceEEEecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC---
Confidence 32 22 233444444332 1223445654 579999999999999999999999999999996
Q ss_pred CceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HhcCCHHHHHHHHHHHHHc
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHR-EQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 508 (808)
.|+|+|+.+|..+.+. +|++++|.|+++++++|.++++. ++++.+...++++. ...+++...++++++.+++
T Consensus 295 -~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 295 -VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred -CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 5699999998888774 49999999999999999999974 44555555566666 5678999999888877654
No 66
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.82 E-value=4.9e-19 Score=195.35 Aligned_cols=254 Identities=20% Similarity=0.184 Sum_probs=170.0
Q ss_pred CCCEEEEeccchHHHHHHHHhh-cCCEE-EeccHH----HHHHHHHHHHHHhCc-eeecCCeEEEEcCeEEEEEEeecCc
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQV-AYDFV-GFHIED----YCLNFIDCCCRRLGS-RVDRNNMLVELAGRTVHVKALPIGI 290 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~-~~dli-gf~~~~----~~~~fl~~~~~~l~~-~~~~~~~~i~~~gr~~~v~v~p~GI 290 (808)
..|+|++|..+......+..+. ..-++ ..|... ..+.++..++.++.. +...+.+.-.++....++.++|+|+
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi 157 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNFRYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGV 157 (355)
T ss_pred CCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHHHHHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCc
Confidence 3799999997765554443332 22222 233222 122233333332221 1111111112333456888999999
Q ss_pred CccccchhhcCchh---hhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHH
Q psy2719 291 PFERFVQLAENAPE---NLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEY 363 (808)
Q Consensus 291 D~~~f~~~~~~~~~---~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~ 363 (808)
|.+.|.+....... .+++ .+.++|+++||+.+.||++.+++|+..+.++.|++ .|+++|.+.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~----~l~ivG~~~~-----~ 228 (355)
T cd03819 158 DLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDV----HLLIVGDAQG-----R 228 (355)
T ss_pred cccccCccccchHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCe----EEEEEECCcc-----c
Confidence 99888653321111 1221 56789999999999999999999999998876654 5888885432 1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC-CCCCCChhHHHHHHhccCCCceEEEcC
Q psy2719 364 KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP-LRDGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 364 ~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S-~~EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
+.+.+.+.+.+.+.+. .+-+.+.|. .+++..+|+.||++++|| ..||||++++|||||+ .|+|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G----~PvI~~~ 295 (355)
T cd03819 229 RFYYAELLELIKRLGL-------QDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMG----RPVIASD 295 (355)
T ss_pred chHHHHHHHHHHHcCC-------cceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcC----CCEEEcC
Confidence 2344444555544332 122345566 678999999999999999 7899999999999996 5689999
Q ss_pred CCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC
Q psy2719 443 FAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQL 493 (808)
Q Consensus 443 ~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~ 493 (808)
.+|..+.+. +|++++|.|+++++++|..++..+++++.+..+++++.+.++
T Consensus 296 ~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 296 HGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred CCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 888777774 499999999999999998888777888887777777777543
No 67
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.81 E-value=3.3e-18 Score=193.52 Aligned_cols=197 Identities=14% Similarity=0.183 Sum_probs=152.4
Q ss_pred cCeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
+....++.++|+|+|...+.+... ..+...|+++||+.+.||++.+++|+.++.+++|+. ++.++.+|.+
T Consensus 203 ~~~~~ki~vi~~gv~~~~~~~~~~-------~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~--~l~~~iiG~g- 272 (407)
T cd04946 203 PAYKEKIKVSYLGVSDPGIISKPS-------KDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSI--KIKWTHIGGG- 272 (407)
T ss_pred CCccccEEEEECCcccccccCCCC-------CCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCc--eEEEEEEeCc-
Confidence 445567889999999876653210 135678999999999999999999999999998876 4667767642
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHh--cCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRD--SAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~--Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
+. .+++++++.+.+. .+.+.+.|.++.+++.++|+. ||+|+.||..||||++++||||||
T Consensus 273 ----~~----~~~l~~~~~~~~~-------~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G--- 334 (407)
T cd04946 273 ----PL----EDTLKELAESKPE-------NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFG--- 334 (407)
T ss_pred ----hH----HHHHHHHHHhcCC-------CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcC---
Confidence 22 2334444432211 133556899999999999986 789999999999999999999996
Q ss_pred CceEEEcCCCCCccccC---ceEEECCC-CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHH
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPY-EIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFL 503 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~-d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 503 (808)
.|+|+|+.+|..+.+. +|++++|. |++++|++|.++++ +++++.++.+++++.+ +.+++..+.++|+
T Consensus 335 -~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 335 -IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred -CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 5699999999888884 47888874 89999999999998 4566666667777777 4678888888775
No 68
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.81 E-value=3.5e-18 Score=193.69 Aligned_cols=207 Identities=15% Similarity=0.170 Sum_probs=155.7
Q ss_pred cCeEEEEEEeecCcCccccchhhcCc-hhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEE
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENA-PENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQ 351 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~-~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ 351 (808)
+....++.++|||||.+.|.+..... ...+++ .++++|+++||+.+.||++.+++|++++ +++|+ +.|++
T Consensus 190 ~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l-~~~~~----~~l~i 264 (412)
T PRK10307 190 GVAAEKVIFFPNWSEVARFQPVADADVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRL-RDRPD----LIFVI 264 (412)
T ss_pred CCCcccEEEECCCcCHhhcCCCCccchHHHHHHcCCCCCCEEEEEcCccccccCHHHHHHHHHHh-ccCCC----eEEEE
Confidence 34556899999999999887643211 122222 4568999999999999999999999876 44554 45887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCC----hhHHHH
Q psy2719 352 ISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMN----LVAKEY 427 (808)
Q Consensus 352 ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~g----Lv~~Ea 427 (808)
+|.+ +. ++++++++.+.+. ..| .|.|.++.+++..+|+.||++++||..|+++ ...+||
T Consensus 265 vG~g-----~~----~~~l~~~~~~~~l-------~~v-~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~ea 327 (412)
T PRK10307 265 CGQG-----GG----KARLEKMAQCRGL-------PNV-HFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNM 327 (412)
T ss_pred ECCC-----hh----HHHHHHHHHHcCC-------Cce-EEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHH
Confidence 7732 22 3445555554332 244 4568999999999999999999999999954 457999
Q ss_pred HHhccCCCceEEEcCCCCC--cccc-CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-cCCHHHHHHHHH
Q psy2719 428 VACQIREPGVLILSPFAGA--GGMM-HEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQ-QLDVNHWMNSFL 503 (808)
Q Consensus 428 ma~~~~~~g~vVlS~~~G~--~~~l-~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l 503 (808)
|||+ .|+|+|..+|. .+.+ .+|++++|.|++++|++|.+++++ ++++..+.+++++++. .+|++.-+++|+
T Consensus 328 ma~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~ 402 (412)
T PRK10307 328 LASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQ-ALLRPKLGTVAREYAERTLDKENVLRQFI 402 (412)
T ss_pred HHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 9996 56888887764 2444 469999999999999999999875 4566666677787775 689999999999
Q ss_pred HHHHccc
Q psy2719 504 SSMGALD 510 (808)
Q Consensus 504 ~~l~~~~ 510 (808)
+.++++.
T Consensus 403 ~~~~~~~ 409 (412)
T PRK10307 403 ADIRGLV 409 (412)
T ss_pred HHHHHHh
Confidence 9888753
No 69
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.81 E-value=1.1e-18 Score=201.00 Aligned_cols=194 Identities=15% Similarity=0.152 Sum_probs=147.0
Q ss_pred CeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
+...+|.++|+|++...+.+.. ......|++|||+.+.||++.+|+|+.++.++.|++ .|+++|.+
T Consensus 294 ~~~~ki~viP~g~~~~~~~~~~--------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~----~l~i~G~G-- 359 (500)
T TIGR02918 294 NIEPRIYTIPVGSLDELQYPEQ--------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPEL----TFDIYGEG-- 359 (500)
T ss_pred CCCCcEEEEcCCCcccccCccc--------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCe----EEEEEECc--
Confidence 3456788999998765443211 023467999999999999999999999999999875 47777742
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
++ ++++++++.+.+.. ..+.+.|.. ++..+|+.||++|+||.+||||++++|||||| .|
T Consensus 360 ---~~----~~~l~~~i~~~~l~-------~~V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G----~P 418 (500)
T TIGR02918 360 ---GE----KQKLQKIINENQAQ-------DYIHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGSG----LG 418 (500)
T ss_pred ---hh----HHHHHHHHHHcCCC-------CeEEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHhC----CC
Confidence 22 34556666554321 334566764 57788999999999999999999999999995 56
Q ss_pred EEEcCCC-CCccccC---ceEEECC----CC----HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 438 LILSPFA-GAGGMMH---EALLVNP----YE----IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 438 vVlS~~~-G~~~~l~---~~llvnP----~d----~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
+|+|+.. |..+.+. +|++|++ .| ++++|++|.++|+ ++++.+..+++++.++.+++..-++++.+.
T Consensus 419 VI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~l 496 (500)
T TIGR02918 419 MIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKL 496 (500)
T ss_pred EEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 8888876 6666663 5999984 33 8999999999994 445666667788888999998888888776
Q ss_pred HHc
Q psy2719 506 MGA 508 (808)
Q Consensus 506 l~~ 508 (808)
+++
T Consensus 497 l~~ 499 (500)
T TIGR02918 497 VRE 499 (500)
T ss_pred Hhh
Confidence 654
No 70
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.81 E-value=1.1e-18 Score=197.91 Aligned_cols=196 Identities=16% Similarity=0.192 Sum_probs=147.1
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCcc-CcEEEEEEEcCCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYV-EKVTFLQISVPSRTD 359 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~-~~v~lv~ig~~~~~~ 359 (808)
.++.++|+|+|++.|.+.... ...++++|+++||+.+.||+..+|+||.++.++.|+.. .++.|+++|.+...
T Consensus 212 ~~~~vi~~gvd~~~~~~~~~~-----~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~- 285 (419)
T cd03806 212 TKPSIVYPPCDVEELLKLPLD-----EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE- 285 (419)
T ss_pred CCcEEEcCCCCHHHhcccccc-----cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-
Confidence 368899999999888653210 01356789999999999999999999999998887521 24678888853211
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
+..++.+++++++.+.+.. +.+.|.|.++.+++..+|+.||++++||..||||++++|||||+ .|+|
T Consensus 286 --~~~~~~~~L~~~~~~l~l~-------~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvI 352 (419)
T cd03806 286 --DDEKRVEDLKLLAKELGLE-------DKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPL 352 (419)
T ss_pred --ccHHHHHHHHHHHHHhCCC-------CeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEE
Confidence 1123556667777665432 33556789999999999999999999999999999999999995 5688
Q ss_pred EcCCCCCcc-ccC------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHH
Q psy2719 440 LSPFAGAGG-MMH------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNH 497 (808)
Q Consensus 440 lS~~~G~~~-~l~------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~ 497 (808)
+|+.+|..+ .+. +|++++ |++++|++|.++++++++++..+.++.++..++++++.
T Consensus 353 a~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 353 AHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred EEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 888777654 443 488874 99999999999999887666555444455555566544
No 71
>PHA01630 putative group 1 glycosyl transferase
Probab=99.80 E-value=1.4e-18 Score=190.40 Aligned_cols=188 Identities=12% Similarity=0.104 Sum_probs=138.9
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++|+|||++.|.+.... ..+..++++++|+.+.||++.+|+|++++.++.|++ .|+++|...
T Consensus 118 ~~i~vIpNGVd~~~f~~~~~~------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG~~~---- 183 (331)
T PHA01630 118 QPIYVIPHNLNPRMFEYKPKE------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKSSNM---- 183 (331)
T ss_pred CCEEEECCCCCHHHcCCCccc------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEeCcc----
Confidence 367789999999988653211 123456667789999999999999999998877754 477777211
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL 440 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl 440 (808)
. +. + +. .+ . . +.+.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+
T Consensus 184 -~--~~--~---l~-~~------~---~---~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIa 238 (331)
T PHA01630 184 -L--DP--R---LF-GL------N---G---VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVV 238 (331)
T ss_pred -c--ch--h---hc-cc------c---c---eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEE
Confidence 0 11 1 10 01 0 1 1356889999999999999999999999999999999996 56999
Q ss_pred cCCCCCccccC---ceEEE--------------------CCCCHHHHHHHHHHHhCCC-HHHHHHHHH-HHhHHHhcCCH
Q psy2719 441 SPFAGAGGMMH---EALLV--------------------NPYEIDAAANVLHRALCMP-RDERELRMS-QLRHREQQLDV 495 (808)
Q Consensus 441 S~~~G~~~~l~---~~llv--------------------nP~d~~~lA~ai~~~L~~~-~~e~~~r~~-~~~~~v~~~~~ 495 (808)
|+.+|..+.+. +|++| +| |.++++++|.++|..+ ++++++++. ..+...+++|+
T Consensus 239 s~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~ 317 (331)
T PHA01630 239 TEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSY 317 (331)
T ss_pred eCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCH
Confidence 99888777763 35555 44 7888999999999864 234444444 45566789999
Q ss_pred HHHHHHHHHHHHc
Q psy2719 496 NHWMNSFLSSMGA 508 (808)
Q Consensus 496 ~~W~~~~l~~l~~ 508 (808)
...++++++.+++
T Consensus 318 ~~ia~k~~~l~~~ 330 (331)
T PHA01630 318 NAIAKMWEKILEK 330 (331)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988754
No 72
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.80 E-value=8.1e-18 Score=184.90 Aligned_cols=202 Identities=21% Similarity=0.320 Sum_probs=150.4
Q ss_pred CeEEEEEEeecCcCccccchhhcCch-hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcC
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAP-ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVP 355 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~-~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~ 355 (808)
....++.++|+|+|.+.|.+...... ..... .++++|+++||+.+.||++.+++|+.++.+++|++ .|+++|..
T Consensus 168 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~~ 243 (375)
T cd03821 168 GLKAPIAVIPNGVDIPPFAALPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDW----HLVIAGPD 243 (375)
T ss_pred CCcccEEEcCCCcChhccCcchhhhhhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCe----EEEEECCC
Confidence 34567899999999988865422110 00011 56789999999999999999999999999887765 47777743
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCC
Q psy2719 356 SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREP 435 (808)
Q Consensus 356 ~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~ 435 (808)
.. .+ ...++.++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||||++++||||||
T Consensus 244 ~~----~~---~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G---- 305 (375)
T cd03821 244 EG----GY---RAELKQIAAALGL-------EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACG---- 305 (375)
T ss_pred Cc----ch---HHHHHHHHHhcCc-------cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcC----
Confidence 21 11 2222333333321 234567899999999999999999999999999999999999996
Q ss_pred ceEEEcCCCCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HhcCCHHHHHHHHH
Q psy2719 436 GVLILSPFAGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHR-EQQLDVNHWMNSFL 503 (808)
Q Consensus 436 g~vVlS~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l 503 (808)
.|+|+|+.+|..+.+. .|+++++ |.++++++|.++++++ +++....+++++. .+.++++.-+++++
T Consensus 306 ~PvI~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 306 TPVVTTDKVPWQELIEYGCGWVVDD-DVDALAAALRRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred CCEEEcCCCCHHHHhhcCceEEeCC-ChHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 5699999888887774 3666654 6699999999999876 5666666666766 57778888777765
No 73
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.79 E-value=3.2e-18 Score=183.05 Aligned_cols=199 Identities=17% Similarity=0.129 Sum_probs=134.9
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++||+|+||||++. ...++++++++|++|++. |+
T Consensus 4 ~kli~~DlDGTLl~~-----~~~~~~~~~~ai~~l~~~----------------------------------------Gi 38 (273)
T PRK00192 4 KLLVFTDLDGTLLDH-----HTYSYEPAKPALKALKEK----------------------------------------GI 38 (273)
T ss_pred ceEEEEcCcccCcCC-----CCcCcHHHHHHHHHHHHC----------------------------------------CC
Confidence 469999999999983 346788899999999987 99
Q ss_pred eEEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCC---------------ceeecCCChhHHHHHHHHHHHHHhhc
Q psy2719 623 NIGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDG---------------TKFVHPVPKEYAEKLRQLIKALQDEV 685 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~---------------~~~~~~~~~~~~~~v~~i~~~~~~~~ 685 (808)
.++|+|||+...+...+... ..++|++||+.|+.+++ ..+..+++. +.+.++++.+.+..
T Consensus 39 ~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~ 115 (273)
T PRK00192 39 PVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGPPY---EELREILDEISDEL 115 (273)
T ss_pred EEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCCCH---HHHHHHHHHHHHHh
Confidence 99999999998877766421 23689999999986432 123345554 35666665544320
Q ss_pred cCCCcEEEe--------------------c--CcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCC
Q psy2719 686 CHDGAWIEN--------------------K--GVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVK 743 (808)
Q Consensus 686 ~~~g~~ie~--------------------k--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~ 743 (808)
...-..... + .....+.+. + ..+..+.+.+.+...++.+..+..++||.|+ +
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~-~ 189 (273)
T PRK00192 116 GYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWN--G---SEAAKERFEEALKRLGLKVTRGGRFLHLLGG-G 189 (273)
T ss_pred CCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeec--C---chHHHHHHHHHHHHcCCEEEECCeEEEEeCC-C
Confidence 000000000 0 000000000 0 0112333444444456666666789999998 9
Q ss_pred CCHHHHHHHHHHHhcCCCC-CcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccc----ccc-cccc
Q psy2719 744 WDQGRASIHILRTMYGVDW-SERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVK----SSW-KQGS 803 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~-~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk----~~A-~~~~ 803 (808)
+||+|+++++++ +|++. + ++++|| |++||+.++ ++++|+| .+++| ..| ++++
T Consensus 190 -~Kg~al~~l~~~-~~i~~~~---~v~~~GDs~NDi~m~~~ag---~~vam~NA~~~~k~~~~~~a~~~v~ 252 (273)
T PRK00192 190 -DKGKAVRWLKEL-YRRQDGV---ETIALGDSPNDLPMLEAAD---IAVVVPGPDGPNPPLLPGIADGEFI 252 (273)
T ss_pred -CHHHHHHHHHHH-HhccCCc---eEEEEcCChhhHHHHHhCC---eeEEeCCCCCCCcccCccccCCceE
Confidence 999999999996 89987 6 899999 999999994 5599998 58899 776 7887
No 74
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.79 E-value=8.1e-19 Score=183.61 Aligned_cols=198 Identities=18% Similarity=0.216 Sum_probs=130.0
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
||++|+||||++ ++..+++.+ ++++ +.++ |+.+
T Consensus 1 li~~DlDgTLl~-----~~~~~~~~~-~~~~-~~~~----------------------------------------gi~~ 33 (236)
T TIGR02471 1 LIITDLDNTLLG-----DDEGLASFV-ELLR-GSGD----------------------------------------AVGF 33 (236)
T ss_pred CeEEeccccccC-----CHHHHHHHH-HHHH-hcCC----------------------------------------CceE
Confidence 589999999998 234566655 5665 4444 8999
Q ss_pred EEEeCCChhhHHHhcCcc----ceEEEcccceeEecCCCceeecCCChhHHHHH------HHHHHHHHhhccCCCcEEEe
Q psy2719 625 GIISGRTLENLMKMVNIE----KVTYAGSHGLEILHPDGTKFVHPVPKEYAEKL------RQLIKALQDEVCHDGAWIEN 694 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~----~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v------~~i~~~~~~~~~~~g~~ie~ 694 (808)
+++|||++..+.+.+... ..++|++||+.|+.+.... .+..|...+ .++.+.+.+ .+|..++.
T Consensus 34 viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 106 (236)
T TIGR02471 34 GIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ----PDRFWQKHIDHDWRRQAVVEALAD---IPGLTLQD 106 (236)
T ss_pred EEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC----CChhHHHHHhcCCCHHHHHHHHhc---CCCcEeCC
Confidence 999999999999887421 2358999999987543210 011121111 122222222 45555554
Q ss_pred cCc--EEEEEcCcCChhhHHHHHHHHHHHHHhc--CeeE-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEE
Q psy2719 695 KGV--LLTFHYRETPIERREYIIDRASQIFLEA--GFEP-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRII 769 (808)
Q Consensus 695 k~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~vi 769 (808)
+.. ...++++..++.. ..+.++.+.+... .+.+ .++..++|+.|+ ++|||.|++.|+++ +|++.+ +++
T Consensus 107 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~-~~~K~~al~~l~~~-~g~~~~---~~i 179 (236)
T TIGR02471 107 DQEQGPFKISYLLDPEGE--PILPQIRQRLRQQSQAAKVILSCGWFLDVLPL-RASKGLALRYLSYR-WGLPLE---QIL 179 (236)
T ss_pred hhcCCCeeEEEEECcccc--hHHHHHHHHHHhccCCEEEEEECCceEEEeeC-CCChHHHHHHHHHH-hCCCHH---HEE
Confidence 431 3444554433211 1123333444333 2333 456678999998 99999999999997 898864 799
Q ss_pred EEe----CHHHHHhccCCccEEEeCC-CCccccccc----cccCcC
Q psy2719 770 YAG----NEDAMLALQGIACTFRVDS-SPTVKSSWK----QGSNHT 806 (808)
Q Consensus 770 a~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~----~~~~~~ 806 (808)
+|| |++||+.+ |.+|+|+| .+++|+.|+ |++.++
T Consensus 180 ~~GD~~nD~~ml~~~---~~~iav~na~~~~k~~a~~~~~~v~~~~ 222 (236)
T TIGR02471 180 VAGDSGNDEEMLRGL---TLGVVVGNHDPELEGLRHQQRIYFANNP 222 (236)
T ss_pred EEcCCccHHHHHcCC---CcEEEEcCCcHHHHHhhcCCcEEEcCCC
Confidence 999 99999988 45699997 589999999 888754
No 75
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.79 E-value=2.7e-18 Score=189.07 Aligned_cols=201 Identities=21% Similarity=0.229 Sum_probs=153.0
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
...++.++|+|+|...+............. .+++.|+++||+.+.||++.+++|+..+.+++|++ .|+++|....
T Consensus 162 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~----~l~i~G~~~~ 237 (365)
T cd03809 162 PPDKIVVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDP----KLVIVGKRGW 237 (365)
T ss_pred CHHHEEeeccccCccccCCCchHHHHHHhcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCC----CEEEecCCcc
Confidence 345788999999988876532210000111 56789999999999999999999999999887754 4777774332
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
. +......+ .+.+ ..+.+.+.|.++.+++..+|+.||++++||..||||++++|||||+ .|
T Consensus 238 ~----~~~~~~~~----~~~~-------~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G----~p 298 (365)
T cd03809 238 L----NEELLARL----RELG-------LGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACG----TP 298 (365)
T ss_pred c----cHHHHHHH----HHcC-------CCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCC----Cc
Confidence 1 11122221 1221 1245667899999999999999999999999999999999999995 56
Q ss_pred EEEcCCCCCccccC-ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHH
Q psy2719 438 LILSPFAGAGGMMH-EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFL 503 (808)
Q Consensus 438 vVlS~~~G~~~~l~-~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 503 (808)
+|+|+.+|..+.+. +|++++|.|+++++++|.++++. ++.+....+++++.+..++|+.++++++
T Consensus 299 vI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 299 VIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred EEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 88888877777664 69999999999999999999874 5566666667778889999999998875
No 76
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.79 E-value=2e-17 Score=182.21 Aligned_cols=205 Identities=18% Similarity=0.205 Sum_probs=152.6
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++|+|+|...+.+.... .......++++|+++||+.+.||++.+++|++.+.+++|++ .|+++|..... .
T Consensus 156 ~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~----~l~i~G~~~~~-~ 229 (366)
T cd03822 156 EKIAVIPHGVPDPPAEPPESL-KALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDV----RLLVAGETHPD-L 229 (366)
T ss_pred CcEEEeCCCCcCcccCCchhh-HhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCe----EEEEeccCccc-h
Confidence 578889999998777543221 11011156789999999999999999999999998887765 47777743211 1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCC--CCChhHHHHHHhccCCCceE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRD--GMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~E--G~gLv~~Eama~~~~~~g~v 438 (808)
. .......+++.+.+.. ..|.++.+.++.+++..+|+.||++++||..| ||+++++|||||| .|+
T Consensus 230 ~---~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G----~Pv 296 (366)
T cd03822 230 E---RYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFG----KPV 296 (366)
T ss_pred h---hhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcC----CCE
Confidence 1 1111101223333221 14555555599999999999999999999999 9999999999996 468
Q ss_pred EEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 439 ILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 439 VlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
|+|+.+| .+++. +|+++++.|+++++++|..+++.+ +.+.+..+++++++++++++.+++++.+.+
T Consensus 297 I~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 297 ISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred EecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 8888877 66662 599999999999999999999854 455566667788888899999999888754
No 77
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.79 E-value=3.8e-18 Score=191.54 Aligned_cols=201 Identities=17% Similarity=0.194 Sum_probs=150.4
Q ss_pred EEEeecCcCccccchhhcCc-hhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhC---CCccCcEEEEEEEcCCC
Q psy2719 283 VKALPIGIPFERFVQLAENA-PENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKH---PEYVEKVTFLQISVPSR 357 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~-~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~---p~~~~~v~lv~ig~~~~ 357 (808)
+.++|+|+|.+.|.+..... ...... .+.++|+++||+.+.||++.+++|++++.++. |+ +.|+++|.+..
T Consensus 181 ~~vi~n~vd~~~~~~~~~~~~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~----~~l~i~G~~~~ 256 (392)
T cd03805 181 REVVYPCVDTDSFESTSEDPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKN----VRLVIAGGYDP 256 (392)
T ss_pred cceeCCCcCHHHcCcccccccccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccC----eEEEEEcCCCC
Confidence 35889999999887643211 010111 56789999999999999999999999998876 55 45888885432
Q ss_pred CChHHHHHHHHHHHHHHHH-HhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 358 TDVLEYKALKDEMDQLVGR-INGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~-in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
. .++..++.+++++++.+ .+.. .-+.|.|.++.+++..+|+.||++++||..||||++++|||||+ .
T Consensus 257 ~-~~~~~~~~~~l~~~~~~~~~l~-------~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G----~ 324 (392)
T cd03805 257 R-VAENVEYLEELQRLAEELLLLE-------DQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAG----K 324 (392)
T ss_pred C-CchhHHHHHHHHHHHHHhcCCC-------ceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC----C
Confidence 1 12222345566666655 3221 33456799999999999999999999999999999999999995 5
Q ss_pred eEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHH
Q psy2719 437 VLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNS 501 (808)
Q Consensus 437 ~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~ 501 (808)
|+|+|+.+|..+.+. +|++++| |++++|++|.++++.+ +++.++.+++++++ ..++++..+++
T Consensus 325 PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 325 PVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP-DLADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred CEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 699999888877774 4888977 9999999999999864 45555666677766 56788777664
No 78
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.78 E-value=4.4e-18 Score=186.24 Aligned_cols=201 Identities=19% Similarity=0.248 Sum_probs=149.2
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
...++.++|+|+|...|.+........+++ .+.++|+++||+.+.||++.+++|+..+.+++|++ .|+++|.
T Consensus 157 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~ 232 (365)
T cd03807 157 PPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNA----RLLLVGD 232 (365)
T ss_pred ChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCe----EEEEecC
Confidence 346788899999998876543321222221 45678999999999999999999999998887765 4777775
Q ss_pred CCCCChHHHHHHHHHHHHHHH-HHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVG-RINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~-~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
++. .... +.... ..+. .+.+.+.+. .+++..+|+.||++++||..||||++++|||+|+
T Consensus 233 ~~~-----~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g-- 292 (365)
T cd03807 233 GPD-----RANL----ELLALKELGL-------EDKVILLGE--RSDVPALLNALDVFVLSSLSEGFPNVLLEAMACG-- 292 (365)
T ss_pred Ccc-----hhHH----HHHHHHhcCC-------CceEEEccc--cccHHHHHHhCCEEEeCCccccCCcHHHHHHhcC--
Confidence 331 1112 22221 2221 123444554 4679999999999999999999999999999996
Q ss_pred CCceEEEcCCCCCccccC-ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-cCCHHHHHHHHHHHH
Q psy2719 434 EPGVLILSPFAGAGGMMH-EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQ-QLDVNHWMNSFLSSM 506 (808)
Q Consensus 434 ~~g~vVlS~~~G~~~~l~-~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~l 506 (808)
.|+|+|+.+|..+.+. .|+++++.|+++++++|.++++++ +++.+....+++++. .+++..-++++.+.+
T Consensus 293 --~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 364 (365)
T cd03807 293 --LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIEENFSIEAMVEAYEELY 364 (365)
T ss_pred --CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 5689999888877776 499999999999999999999865 555566666677664 578888888887643
No 79
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.78 E-value=5.4e-18 Score=184.04 Aligned_cols=190 Identities=20% Similarity=0.280 Sum_probs=145.2
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
...++.++|+|+|...+.+. ...+++.++++||+.+.||++.+++|++++.+..|++ .|+++|.+.
T Consensus 154 ~~~~~~vi~~~~~~~~~~~~--------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~----~l~i~G~~~-- 219 (348)
T cd03820 154 FNKNVVVIPNPLPFPPEEPS--------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDW----KLRIVGDGP-- 219 (348)
T ss_pred CCCCeEEecCCcChhhcccc--------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCe----EEEEEeCCC--
Confidence 45678899999998776543 0135678999999999999999999999998877765 477777432
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
+. ..+++++.+.+. .+.+.+.|. .+++..+|+.||++++||..||||++++|||+|+ .|+
T Consensus 220 ---~~----~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G----~Pv 279 (348)
T cd03820 220 ---ER----EALEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFG----LPV 279 (348)
T ss_pred ---CH----HHHHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHcC----CCE
Confidence 11 223334444432 234556666 6899999999999999999999999999999996 568
Q ss_pred EEcCCCCCcccc-C---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHH
Q psy2719 439 ILSPFAGAGGMM-H---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFL 503 (808)
Q Consensus 439 VlS~~~G~~~~l-~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 503 (808)
|+|+..|..+.+ . .|+++++.|+++++++|.++++. ++.+....+++++.++.++++..+++|.
T Consensus 280 i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 280 ISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED-EELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred EEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 888876655444 2 58999999999999999999985 4455555556677888899998888774
No 80
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.78 E-value=7.8e-18 Score=187.88 Aligned_cols=186 Identities=18% Similarity=0.240 Sum_probs=141.2
Q ss_pred EEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHH
Q psy2719 283 VKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLE 362 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~ 362 (808)
+.++|+|++.+.+.+... ....+..|+++||+.+.||++.+|+|+.++.+++|+++ |+++|.+. .
T Consensus 182 v~~ip~g~~~~~~~~~~~------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g~-----~ 246 (372)
T cd04949 182 IYTIPVGSIDPLKLPAQF------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYGD-----E 246 (372)
T ss_pred eEEEcccccChhhcccch------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeCc-----h
Confidence 778999999887764310 01345679999999999999999999999999998764 77777532 1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC
Q psy2719 363 YKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 363 ~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
. ..+..++.+.+. ...+.+.|. .+++..+|+.||++|+||..||||++++|||||+ .|+|+|+
T Consensus 247 ~----~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G----~PvI~~~ 309 (372)
T cd04949 247 E----EKLKELIEELGL-------EDYVFLKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHG----LPVISYD 309 (372)
T ss_pred H----HHHHHHHHHcCC-------cceEEEcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhCC----CCEEEec
Confidence 1 223333333322 133455663 4679999999999999999999999999999995 5688888
Q ss_pred CC-CCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHH
Q psy2719 443 FA-GAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNS 501 (808)
Q Consensus 443 ~~-G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~ 501 (808)
.. |..+.+. +|++++|.|++++|++|..+++.+ +.+.+...++++...++++...+++
T Consensus 310 ~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 310 VNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred CCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 76 6666663 599999999999999999999864 5566666667777778887776654
No 81
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.78 E-value=1.2e-17 Score=185.95 Aligned_cols=254 Identities=12% Similarity=0.094 Sum_probs=160.0
Q ss_pred CCCEEEEeccchHHHHHHHHhhc---CCEEE-eccHHHHHHH-----HHHHHHHhCc-eeecCCeEEEEcCeEEEEEEee
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA---YDFVG-FHIEDYCLNF-----IDCCCRRLGS-RVDRNNMLVELAGRTVHVKALP 287 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~---~dlig-f~~~~~~~~f-----l~~~~~~l~~-~~~~~~~~i~~~gr~~~v~v~p 287 (808)
..|+|++|+.....+...+++.. .-++. .|.......+ +..++.++.. +...+.+ ..++-...++.++|
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~d~~i~~S~~~~~~~-~~~~~~~~ki~vi~ 162 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAECKKITCADYHLAISSGIKEQM-MARGISAQRISVIY 162 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhhhhhhhcCCEEEEcCHHHHHHH-HHcCCCHHHEEEEc
Confidence 47999999987776666665432 11222 1211000001 1222222211 1111111 12222345788999
Q ss_pred cCcCccccchhhcCchhhhhcCCCeEEEEEcCcc--ccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHH
Q psy2719 288 IGIPFERFVQLAENAPENLKDENLKVILGVDRLD--YTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKA 365 (808)
Q Consensus 288 ~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~--~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~ 365 (808)
||||.+.+...... ..+++.|+++||+. +.||+..+++|+.++. + ++.|+++|.+ ++
T Consensus 163 N~id~~~~~~~~~~------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~----~~~l~ivG~g-----~~--- 221 (359)
T PRK09922 163 NPVEIKTIIIPPPE------RDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---G----EWQLHIIGDG-----SD--- 221 (359)
T ss_pred CCCCHHHccCCCcc------cCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---C----CeEEEEEeCC-----cc---
Confidence 99997665321110 13457899999996 4699999999998752 2 3568888743 22
Q ss_pred HHHHHHHHHHHHhccCCCCCCccEEEEcCCC--CHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC-
Q psy2719 366 LKDEMDQLVGRINGRFSKPNWSPIRYIFGCI--GQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP- 442 (808)
Q Consensus 366 l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v--~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~- 442 (808)
++++++++.+.+.. +-+.|.|.+ +.+++..+|+.||++|+||..||||++++|||||+ .|+|+|+
T Consensus 222 -~~~l~~~~~~~~l~-------~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G----~Pvv~s~~ 289 (359)
T PRK09922 222 -FEKCKAYSRELGIE-------QRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG----IPCISSDC 289 (359)
T ss_pred -HHHHHHHHHHcCCC-------CeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcC----CCEEEeCC
Confidence 23445555554421 234566765 45889999999999999999999999999999996 5689998
Q ss_pred CCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 443 FAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 443 ~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
.+|..+.+. +|++|+|.|++++|++|.++++.+.. | ......+.+.++..+.-.+++...+.+
T Consensus 290 ~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 290 MSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK-Y--QHDAIPNSIERFYEVLYFKNLNNALFS 355 (359)
T ss_pred CCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc-C--CHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 777777774 49999999999999999999986631 1 112223334455555555555555443
No 82
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.78 E-value=1.4e-17 Score=183.50 Aligned_cols=193 Identities=22% Similarity=0.281 Sum_probs=146.7
Q ss_pred CeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
....++.++|+|+|.+.|.+.... ...++..|+++||+.+.||++.+++|++.+.++.|+ +.|+++|...
T Consensus 151 ~~~~~~~vi~~~~d~~~~~~~~~~-----~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~----~~l~i~G~~~- 220 (355)
T cd03799 151 CDPDKIHVVHCGVDLERFPPRPPP-----PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGID----FRLDIVGDGP- 220 (355)
T ss_pred CCcccEEEEeCCcCHHHcCCcccc-----ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCC----eEEEEEECCc-
Confidence 456788999999998887653200 014567899999999999999999999998877665 4577777432
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC------CCCChhHHHHHHhc
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR------DGMNLVAKEYVACQ 431 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~------EG~gLv~~Eama~~ 431 (808)
. ..++.+.+.+.+. .+.+.+.|.++.+++..+|+.||++++||.. ||||++++|||||+
T Consensus 221 ----~----~~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G 285 (355)
T cd03799 221 ----L----RDELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMG 285 (355)
T ss_pred ----c----HHHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcC
Confidence 1 2233444444321 2446678999999999999999999999999 99999999999995
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMN 500 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~ 500 (808)
.|+|+|+.+|..+.+. +|++++|.|+++++++|.++++++ +++....+++++.+ ..+++...++
T Consensus 286 ----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 286 ----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDP-ELRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred ----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHhh
Confidence 5688888877776663 599999999999999999999864 44555555666666 4567666554
No 83
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.77 E-value=2.2e-17 Score=186.05 Aligned_cols=187 Identities=11% Similarity=0.062 Sum_probs=132.7
Q ss_pred EeecCcCccccchhhcCchhhhhcCC--CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHH
Q psy2719 285 ALPIGIPFERFVQLAENAPENLKDEN--LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLE 362 (808)
Q Consensus 285 v~p~GID~~~f~~~~~~~~~~~~~~~--~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~ 362 (808)
+.+.|||++.|.+............+ .+++++||||.+.||+..+|+||+.+.++.|++ .|+++|. +|+
T Consensus 200 ~~v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivGd-----Gp~ 270 (462)
T PLN02846 200 CNVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYGS-----GED 270 (462)
T ss_pred ecCceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEECC-----Ccc
Confidence 34589999988765332111111122 357999999999999999999999998888875 4777763 344
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC
Q psy2719 363 YKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 363 ~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
. ++|++++.+++. .+++|.|..+.+ .+|+.+|+||+||.+||||+|++|||||+ .|+|+++
T Consensus 271 ~----~~L~~~a~~l~l--------~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G----~PVVa~~ 331 (462)
T PLN02846 271 S----DEVKAAAEKLEL--------DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMG----KIVVCAN 331 (462)
T ss_pred H----HHHHHHHHhcCC--------cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcC----CcEEEec
Confidence 3 344555555432 234577766554 58999999999999999999999999995 4588887
Q ss_pred CCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 443 FAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 443 ~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
..| .+.+. +|+++ .|.++++++|.++|+.++++... +. ...+||+.=++++++.+.-
T Consensus 332 ~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 332 HPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred CCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhcc
Confidence 765 56663 47776 48999999999999854433211 11 2378888888888876653
No 84
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.77 E-value=1e-17 Score=173.53 Aligned_cols=184 Identities=13% Similarity=0.163 Sum_probs=120.9
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
+|++|+||||++. +..++++++++|++|.+. |+.|
T Consensus 1 ~i~~DlDGTLL~~-----~~~~~~~~~~~l~~l~~~----------------------------------------gi~~ 35 (221)
T TIGR02463 1 WVFSDLDGTLLDS-----HSYDWQPAAPWLTRLQEA----------------------------------------GIPV 35 (221)
T ss_pred CEEEeCCCCCcCC-----CCCCcHHHHHHHHHHHHC----------------------------------------CCeE
Confidence 5899999999983 233556699999999887 9999
Q ss_pred EEEeCCChhhHHHhcC---ccceEEEcccceeEecCCC-c-e-----eecCCChhHHHHHHHHHHHHHhhccCCCcEEEe
Q psy2719 625 GIISGRTLENLMKMVN---IEKVTYAGSHGLEILHPDG-T-K-----FVHPVPKEYAEKLRQLIKALQDEVCHDGAWIEN 694 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~---~~~~~li~~nG~~i~~~~~-~-~-----~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~ 694 (808)
+++|||+...+...+. ..+.++|++||+.|+.... . . ....++.+ .++++++.+.+.....-.....
T Consensus 36 ~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~ 112 (221)
T TIGR02463 36 ILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWREEPGYPRIILGISYG---IIRLVLETLSEELHFKFTPFDD 112 (221)
T ss_pred EEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccccCCCceEEecCCCHH---HHHHHHHHHHHHhCCCceehhh
Confidence 9999999998877764 3225799999999987532 2 1 22344433 4566665443321000000000
Q ss_pred ----------------------cCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHH
Q psy2719 695 ----------------------KGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIH 752 (808)
Q Consensus 695 ----------------------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ 752 (808)
+.....+... .+ .+..+.+.+.+...++.+.++..++||.|+ +++||.|+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~-~~~Kg~al~~ 186 (221)
T TIGR02463 113 LSDAEIAELTGLSGSQAALAQDREASVPLLWR-DS----DSRMPRFTALLADLGLAIVQGNRFSHVLGA-SSSKGKAANW 186 (221)
T ss_pred CCHHHHHHHhCcCHHHHHHHHhccCCccEEec-Cc----hhHHHHHHHHHHHcCCeEEecCCeeEEecC-CCCHHHHHHH
Confidence 0001111110 01 112233444444456666556789999998 9999999999
Q ss_pred HHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEe
Q psy2719 753 ILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRV 789 (808)
Q Consensus 753 ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav 789 (808)
++++ +|++.+ ++++|| |++||+.++ .| |||
T Consensus 187 l~~~-lgi~~~---~vi~~GD~~NDi~ml~~ag-~~--va~ 220 (221)
T TIGR02463 187 LKAT-YNQPDV---KTLGLGDGPNDLPLLEVAD-YA--VVI 220 (221)
T ss_pred HHHH-hCCCCC---cEEEECCCHHHHHHHHhCC-ce--EEe
Confidence 9997 899875 799999 999999995 44 776
No 85
>PLN02382 probable sucrose-phosphatase
Probab=99.76 E-value=1e-17 Score=187.93 Aligned_cols=209 Identities=14% Similarity=0.147 Sum_probs=130.5
Q ss_pred CCCceEEEEecccccccCCCCCCccCCCHHHHHHH-HHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhC
Q psy2719 540 GNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVL-ERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLAN 618 (808)
Q Consensus 540 ~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L-~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~ 618 (808)
++.+.+|++|+||||++.. +++.++.....+| +++.++
T Consensus 6 ~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~-------------------------------------- 44 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRH-------------------------------------- 44 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcC--------------------------------------
Confidence 3567899999999999842 1235665555555 777666
Q ss_pred CCCCeEEEEeCCChhhHHHh---cCc-cceEEEcccceeEecCCCc----eeecCCChhHHHH-HHHHHHHHHhhccCCC
Q psy2719 619 MPDVNIGIISGRTLENLMKM---VNI-EKVTYAGSHGLEILHPDGT----KFVHPVPKEYAEK-LRQLIKALQDEVCHDG 689 (808)
Q Consensus 619 ~pg~~v~I~SGR~~~~l~~~---~~~-~~~~li~~nG~~i~~~~~~----~~~~~~~~~~~~~-v~~i~~~~~~~~~~~g 689 (808)
|+.++++|||++..+.++ ++. .+..+|+.||+.|+..+.. .|...++..|... +.+.+..+... ...
T Consensus 45 --gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l--~~q 120 (413)
T PLN02382 45 --DSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETSKFPEL--KLQ 120 (413)
T ss_pred --CeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHhcCCCc--ccC
Confidence 899999999996665554 443 2335788899999764321 1111122222211 11111111110 111
Q ss_pred cEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcC--eeE-EccCeEEEEeCCCCCCHHHHHHHHHHHhc---CCCCC
Q psy2719 690 AWIENKGVLLTFHYRETPIERREYIIDRASQIFLEAG--FEP-HNALMAIEAKPPVKWDQGRASIHILRTMY---GVDWS 763 (808)
Q Consensus 690 ~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~---~i~~~ 763 (808)
...+.+...+.+.+... ....+...+.+.+...+ +.+ .++..++||.|+ ++|||.|++.|+++ + |++.+
T Consensus 121 ~~~~~~~~Ki~~~~~~~---~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~-g~sKg~Al~~L~~~-~~~~gi~~~ 195 (413)
T PLN02382 121 PETEQRPHKVSFYVDKK---KAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQ-GAGKGQALAYLLKK-LKAEGKAPV 195 (413)
T ss_pred CcccCCCeEEEEEechH---HhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeC-CCCHHHHHHHHHHH-hhhcCCChh
Confidence 22233444555544321 12233444555454433 443 577789999998 99999999999997 7 88865
Q ss_pred cceeEEEEe----CHHHHHhccCCccEEEeCC-CCcccccccccc
Q psy2719 764 ERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGS 803 (808)
Q Consensus 764 ~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~ 803 (808)
++++|| |++||+.++. ++|+|+| .+++|+.|.+++
T Consensus 196 ---~~iafGDs~NDleMl~~ag~--~gvam~NA~~elk~~a~~~~ 235 (413)
T PLN02382 196 ---NTLVCGDSGNDAELFSVPDV--YGVMVSNAQEELLQWYAENA 235 (413)
T ss_pred ---cEEEEeCCHHHHHHHhcCCC--CEEEEcCCcHHHHHHHHhhc
Confidence 799999 9999999842 4599998 588998765444
No 86
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.76 E-value=7.4e-17 Score=175.89 Aligned_cols=201 Identities=23% Similarity=0.293 Sum_probs=151.7
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
.++.++|+|+|...+.+........... .+.+.|+++||+.+.||+..+++|+..+.+++|++ .|+++|.+
T Consensus 168 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~----~l~i~G~~---- 239 (374)
T cd03801 168 EKITVIPNGVDTERFRPAPRAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDV----RLVIVGDG---- 239 (374)
T ss_pred CcEEEecCcccccccCccchHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCe----EEEEEeCc----
Confidence 5889999999998875431000000011 45678999999999999999999999998887654 57777722
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
+. ...+.+++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||+|++++|||+|+ .|+|
T Consensus 240 -~~----~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g----~pvI 303 (374)
T cd03801 240 -PL----REELEALAAELGL-------GDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAG----LPVV 303 (374)
T ss_pred -HH----HHHHHHHHHHhCC-------CcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcC----CcEE
Confidence 22 2333333333322 123456789999999999999999999999999999999999995 5689
Q ss_pred EcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh-HHHhcCCHHHHHHHHHHHH
Q psy2719 440 LSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLR-HREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 440 lS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~-~~v~~~~~~~W~~~~l~~l 506 (808)
++..+|..+.+. .|+++++.|+++++++|.++++.+ +.+++....++ ...+.++++.+++++++.+
T Consensus 304 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 304 ASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred EeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 999888888775 599999999999999999999854 44444555555 4567789999999887754
No 87
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.75 E-value=2.9e-17 Score=181.06 Aligned_cols=183 Identities=21% Similarity=0.249 Sum_probs=137.1
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
.++.++|+|+|.+.|.+........... .+.++|+++||+.+.||++.+++|++++. ++.|+++|.+
T Consensus 160 ~~~~~i~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~--------~~~l~i~G~g---- 227 (357)
T cd03795 160 DKVRVIPLGLDPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP--------DAPLVIVGEG---- 227 (357)
T ss_pred cceEEecCCCChhhcCCcchhhhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhcc--------CcEEEEEeCC----
Confidence 6788999999998876532211111111 56789999999999999999999998764 3567777743
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCce
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~ 437 (808)
+. ..++.+++.+.+. .+-+.+.|.++++++..+|+.||++++||. .||||++++|||+|+ .|
T Consensus 228 -~~----~~~~~~~~~~~~~-------~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g----~P 291 (357)
T cd03795 228 -PL----EAELEALAAALGL-------LDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFG----KP 291 (357)
T ss_pred -hh----HHHHHHHHHhcCC-------cceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcC----CC
Confidence 22 2334444433321 133556799999999999999999999996 599999999999995 56
Q ss_pred EEEcCCCCCccccC----ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhc
Q psy2719 438 LILSPFAGAGGMMH----EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQ 492 (808)
Q Consensus 438 vVlS~~~G~~~~l~----~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~ 492 (808)
+|+|+.+|..+.+. .|++++|.|+++++++|.+++++ ++++.+...++++.+.+
T Consensus 292 vi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 292 VISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED-PELRERLGEAARERAEE 349 (357)
T ss_pred EEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH
Confidence 88888888777663 48999999999999999999985 45556666666766643
No 88
>PLN02423 phosphomannomutase
Probab=99.75 E-value=4.9e-17 Score=170.68 Aligned_cols=195 Identities=17% Similarity=0.249 Sum_probs=124.4
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
.++++|+|+||||++ +++.+++++.++|++|++ +
T Consensus 6 ~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~-----------------------------------------~ 39 (245)
T PLN02423 6 PGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRK-----------------------------------------V 39 (245)
T ss_pred cceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHh-----------------------------------------C
Confidence 356777999999998 345799999999999984 4
Q ss_pred CeEEEEeCCChhhHHHhcCcc---c-eEEEcccceeEecCCCceeec----CCChhHHHHHHHHHHHHHhh---c---cC
Q psy2719 622 VNIGIISGRTLENLMKMVNIE---K-VTYAGSHGLEILHPDGTKFVH----PVPKEYAEKLRQLIKALQDE---V---CH 687 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~~---~-~~li~~nG~~i~~~~~~~~~~----~~~~~~~~~v~~i~~~~~~~---~---~~ 687 (808)
+.|+++|||+...+.+.++.. . .++|++||+.+...++..+.. .++.+ .++++++..... . ..
T Consensus 40 i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~~i~~~~l~~~l~~~---~~~~ii~~~~~~~~~~~i~~~ 116 (245)
T PLN02423 40 VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGKLIGTQSLKSFLGED---KLKEFINFTLHYIADLDIPIK 116 (245)
T ss_pred CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCEEEEEecccccCCHH---HHHHHHHHHHHHHHHcCCccc
Confidence 899999999999998877642 1 378999999998654444442 24434 455665554431 0 12
Q ss_pred CCcEEEecCcEEEEEc--CcCChhhH---------HHHHHHHHH-HHHhc-CeeE---EccCeEEEEeCCCCCCHHHHHH
Q psy2719 688 DGAWIENKGVLLTFHY--RETPIERR---------EYIIDRASQ-IFLEA-GFEP---HNALMAIEAKPPVKWDQGRASI 751 (808)
Q Consensus 688 ~g~~ie~k~~~~~~~~--~~~~~~~~---------~~~~~~~~~-~~~~~-~~~v---~~g~~~vEv~p~~~v~KG~av~ 751 (808)
.+.+++..+..+...+ ..+..... .+....+.+ +.+.+ ++.+ .+|..++||+|+ |+|||.||+
T Consensus 117 ~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~-gvnKg~al~ 195 (245)
T PLN02423 117 RGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQ-GWDKTYCLQ 195 (245)
T ss_pred cCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeC-CCCHHHHHH
Confidence 3455554333222221 12211100 011112222 22333 2332 356689999998 999999999
Q ss_pred HHHHHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCCCCcccc
Q psy2719 752 HILRTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDSSPTVKS 797 (808)
Q Consensus 752 ~ll~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~~~~vk~ 797 (808)
.|+ +.+ ++|||| |++||+.-+-. +++|.+.++.++
T Consensus 196 ~L~------~~~---e~~aFGD~~~~~~ND~eMl~~~~~~--~~~~~~~~~~~~ 238 (245)
T PLN02423 196 FLE------DFD---EIHFFGDKTYEGGNDHEIFESERTI--GHTVTSPDDTRE 238 (245)
T ss_pred Hhc------CcC---eEEEEeccCCCCCCcHHHHhCCCcc--eEEeCCHHHHHH
Confidence 987 222 899999 69999976534 488888665543
No 89
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.75 E-value=7.9e-17 Score=177.16 Aligned_cols=193 Identities=20% Similarity=0.246 Sum_probs=149.9
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhc---CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKD---ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~---~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
.++.++|+|+|.+.|.+.... ...++. .++++|+++||+.+.||++.+++|+..+.++ |++ .|+++|.+.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-~~~----~l~i~G~~~- 237 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRD-EALRARLGPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR-PPV----RLVIVGDGP- 237 (364)
T ss_pred CceeecCCCccccccCccccc-HHHHHHhCCCCCeEEEEEeccccccCHHHHHHHHHHhhhc-CCc----eEEEEeCCc-
Confidence 467889999999888654322 111111 4567899999999999999999999998876 655 477777421
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
+...++ ..+ ..| .+.|.++.+++..+|+.||++++||..||||++++|||||+ .|
T Consensus 238 ----~~~~~~--------~~~--------~~v-~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g----~P 292 (364)
T cd03814 238 ----ARARLE--------ARY--------PNV-HFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASG----LP 292 (364)
T ss_pred ----hHHHHh--------ccC--------CcE-EEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcC----CC
Confidence 111121 111 134 45688999999999999999999999999999999999995 56
Q ss_pred EEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 438 LILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 438 vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
+|+|+.+|..+.+. .|++++|.|.++++++|.++++. ++++.+....+++.+..++++.+++++++.+
T Consensus 293 vI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 293 VVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLAD-PELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred EEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999888887774 49999999999999999999975 4556666667777788899999999888654
No 90
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.74 E-value=4.7e-17 Score=184.63 Aligned_cols=201 Identities=11% Similarity=0.117 Sum_probs=141.7
Q ss_pred cCeEEEEEEeecCcCccccchhhcCc--hhhhh------------------cCCCeEEEEEcCccccCChHHHHHHHHHH
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENA--PENLK------------------DENLKVILGVDRLDYTKGLVHRIKAFERL 336 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~--~~~~~------------------~~~~~iil~V~Rl~~~KGi~~~l~A~~~l 336 (808)
+....++.++|+| +.+.|.+..... ....+ ..+..+++++||+.+.||++.+++|++.+
T Consensus 179 ~~~~~ki~vI~Ng-~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l 257 (415)
T cd03816 179 NNWKIRATVLYDR-PPEQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAY 257 (415)
T ss_pred hccCCCeeecCCC-CHHHceeCcHHHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHH
Confidence 3456788999999 556676532211 01110 03346788999999999999999999998
Q ss_pred HHhCCCc--cCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEEC
Q psy2719 337 LEKHPEY--VEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414 (808)
Q Consensus 337 l~~~p~~--~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~ 414 (808)
.+..++. ..++.|+++|.+. .++++++++.+.+ ...++++.|.++.++++.+|++||++|++
T Consensus 258 ~~~~~~~~~~~~i~l~ivG~G~---------~~~~l~~~~~~~~-------l~~~~~~~g~~~~~~~~~~l~~aDv~v~~ 321 (415)
T cd03816 258 EKSAATGPKLPKLLCIITGKGP---------LKEKYLERIKELK-------LKKVTIRTPWLSAEDYPKLLASADLGVSL 321 (415)
T ss_pred HHhhcccccCCCEEEEEEecCc---------cHHHHHHHHHHcC-------CCcEEEEcCcCCHHHHHHHHHhCCEEEEc
Confidence 7632110 1135688887432 2345555555443 23678888899999999999999999974
Q ss_pred ---CCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCC--HHHHHHHHHHH
Q psy2719 415 ---PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMP--RDERELRMSQL 486 (808)
Q Consensus 415 ---S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~--~~e~~~r~~~~ 486 (808)
+..|||+++++|||||+ .|+|+|+..|..+.+. +|++|+ |++++|++|.++++++ +++++++.+++
T Consensus 322 ~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~ 395 (415)
T cd03816 322 HTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGA 395 (415)
T ss_pred cccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 33588999999999996 5689999888888774 499994 9999999999999862 55665555555
Q ss_pred hHHHhcCCHHHHHHHHHH
Q psy2719 487 RHREQQLDVNHWMNSFLS 504 (808)
Q Consensus 487 ~~~v~~~~~~~W~~~~l~ 504 (808)
++..+ ..|.+.+..
T Consensus 396 ~~~~~----~~~~~~~~~ 409 (415)
T cd03816 396 QEESE----LRWDENWDR 409 (415)
T ss_pred HHhhh----cCHHHHHHH
Confidence 65543 455555544
No 91
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.74 E-value=4.4e-16 Score=169.78 Aligned_cols=193 Identities=20% Similarity=0.233 Sum_probs=143.7
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
..++.+.|+|+|.+.+.+.... ...+++.|+++||+.+.||++.+++|++.+.+++|++ .|+++|.+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~----~l~i~G~~~~~~ 232 (359)
T cd03808 162 KKTVLIPGSGVDLDRFSPSPEP-----IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNV----RLLLVGDGDEEN 232 (359)
T ss_pred CceEEecCCCCChhhcCccccc-----cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCe----EEEEEcCCCcch
Confidence 3567788999998877653220 0145678999999999999999999999998877765 477777543211
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
+ .... ++...+. .+.+.+.|. .+++..+|+.||++++||..||||++++|||+|| .|+|
T Consensus 233 ---~--~~~~---~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G----~Pvi 291 (359)
T cd03808 233 ---P--AAIL---EIEKLGL-------EGRVEFLGF--RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMG----RPVI 291 (359)
T ss_pred ---h--hHHH---HHHhcCC-------cceEEEeec--cccHHHHHHhccEEEecCcccCcchHHHHHHHcC----CCEE
Confidence 1 1111 1222221 122344555 5789999999999999999999999999999996 5699
Q ss_pred EcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HhcCCHHHHHHHHH
Q psy2719 440 LSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHR-EQQLDVNHWMNSFL 503 (808)
Q Consensus 440 lS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l 503 (808)
+|+.+|..+.+. .|+++++.|+++++++|.+++.. ++.+.+...+++++ ...+++..+++.++
T Consensus 292 ~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 292 ATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIED-PELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred EecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999988888774 49999999999999999998875 44555555566666 57788888888765
No 92
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.74 E-value=3.1e-16 Score=171.76 Aligned_cols=204 Identities=25% Similarity=0.344 Sum_probs=152.0
Q ss_pred eEEEEEEeecCcCccccchhhcCchh-hhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPE-NLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~-~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
...++.++|+|+|.+.|.+....... .....+++.|+++||+.+.||+..+++|++.+.+++|++ .|+++|.+.
T Consensus 169 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~----~l~i~g~~~- 243 (377)
T cd03798 169 DPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDV----HLVIVGDGP- 243 (377)
T ss_pred CCCceEEcCCCcCcccCCCcchHHHHhccCCCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCe----EEEEEcCCc-
Confidence 45678899999999888654221100 011146788999999999999999999999998876654 477666422
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
.. ..+.+++...+ ..+.+.+.|.++++++..+|+.||++++||..||||++++|||+|+ .|
T Consensus 244 ----~~----~~~~~~~~~~~-------~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G----~p 304 (377)
T cd03798 244 ----LR----EALEALAAELG-------LEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACG----LP 304 (377)
T ss_pred ----ch----HHHHHHHHhcC-------CcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcC----CC
Confidence 22 22333333322 2244567799999999999999999999999999999999999996 56
Q ss_pred EEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 438 LILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 438 vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
+|+|+.+|..+.+. .|+++++.|+++++++|.++++++.. +..........+.++++.+++++.+.+++
T Consensus 305 vI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 305 VVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred EEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 89998888777764 37999999999999999999987654 22222334455677889999888877754
No 93
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.74 E-value=1.3e-18 Score=194.86 Aligned_cols=88 Identities=25% Similarity=0.548 Sum_probs=73.1
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+||||+||++++++.+|+||||+|....+. ++.. ......+++.||+|+++++++||+||||++|||+||
T Consensus 21 ~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~-------~~~~---~~~~~~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfH 90 (474)
T PRK10117 21 AGGLAVGILGALKAAGGLWFGWSGETGNED-------QPLK---KVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFH 90 (474)
T ss_pred CCCcHHHHHHHHHhcCceEEEecCCCCCCc-------ccch---hhhcCCceEEEecCCHHHHHHHHhhhhhcchhhhhC
Confidence 599999999999999999999999653210 1000 001124689999999999999999999999999999
Q ss_pred cCccccccCcccchhhhh
Q psy2719 81 SMPDRAVFNAETWKVSHL 98 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~ 98 (808)
|+++...|++++|+.|+.
T Consensus 91 y~~~~~~~~~~~w~~Y~~ 108 (474)
T PRK10117 91 YRLDLVQFQRPAWEGYLR 108 (474)
T ss_pred CCCCccCcCHHHHHHHHH
Confidence 999999999999999974
No 94
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.74 E-value=4.2e-16 Score=171.41 Aligned_cols=198 Identities=21% Similarity=0.323 Sum_probs=145.4
Q ss_pred EEEEEEeecCcCccccchhhcCch-hhhh-cCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAP-ENLK-DENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~-~~~~-~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
..++.++|+|+|...|.+...... .... ..+++.|+++||+.+.||++.+++|++.+.++.|++ .|+++|.+.
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~----~l~i~G~~~- 243 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDV----KLVIVGDGP- 243 (374)
T ss_pred CCceEEcCCccchhccCccchhHHHHhcCCCCCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCe----EEEEEeCCc-
Confidence 345889999999988765432110 0001 145688999999999999999999999998876654 577777421
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
. .+.+++++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||+|++++|||+|+ .|
T Consensus 244 ----~----~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g----~P 304 (374)
T cd03817 244 ----E----REELEELARELGL-------ADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAG----LP 304 (374)
T ss_pred ----h----HHHHHHHHHHcCC-------CCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcC----Cc
Confidence 1 2334444444332 133556799999999999999999999999999999999999995 56
Q ss_pred EEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 438 LILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 438 vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
+|+|..++..+.+. +|+++++.|. +++++|.++++++. .+++..++.++.+..++ |++.+.+.+
T Consensus 305 vI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~ 371 (374)
T cd03817 305 VVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRLSKNAEESAEKFS---FAKKVEKLY 371 (374)
T ss_pred EEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 88888887777774 4999999888 99999999998754 34555566677776654 444444433
No 95
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.73 E-value=1.2e-15 Score=167.08 Aligned_cols=189 Identities=18% Similarity=0.224 Sum_probs=139.2
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
..++.++|+|+|...+.+... ....++.+|+++||+.+.||++.+++|+..+.+ ++ +.|+++|.....
T Consensus 165 ~~~~~vi~n~~~~~~~~~~~~-----~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~----~~l~i~G~~~~~- 232 (359)
T cd03823 165 AEKISVIRNGIDLDRAKRPRR-----APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR--GD----IELVIVGNGLEL- 232 (359)
T ss_pred ccceEEecCCcChhhcccccc-----CCCCCceEEEEEecCccccCHHHHHHHHHHHHh--cC----cEEEEEcCchhh-
Confidence 468899999999988764321 011456789999999999999999999998876 44 457777743211
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~v 438 (808)
....... .. .+.+.+.|.++.+++..+|+.||++++||. .||||++++|||||+ .|+
T Consensus 233 ----~~~~~~~-----~~---------~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G----~Pv 290 (359)
T cd03823 233 ----EEESYEL-----EG---------DPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG----VPV 290 (359)
T ss_pred ----hHHHHhh-----cC---------CCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC----CCE
Confidence 1111110 11 133556799999999999999999999997 799999999999996 569
Q ss_pred EEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 439 ILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 439 VlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
|+|+.+|..+.+. .|++++|.|+++++++|.++++. ++.++....++++.+.. ...++++++.+
T Consensus 291 i~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 357 (359)
T cd03823 291 IASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDD-PDLLERLRAGIEPPRSI---EDQAEEYLKLY 357 (359)
T ss_pred EECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC-hHHHHHHHHhHHHhhhH---HHHHHHHHHHh
Confidence 9999888877774 49999999999999999999984 44555555555554432 55555555433
No 96
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.72 E-value=2.2e-16 Score=181.22 Aligned_cols=188 Identities=17% Similarity=0.173 Sum_probs=127.9
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
++++||+|+||||++.. ..++++++++|++|+++ |
T Consensus 415 ~~KLIfsDLDGTLLd~d-----~~i~~~t~eAL~~L~ek----------------------------------------G 449 (694)
T PRK14502 415 FKKIVYTDLDGTLLNPL-----TYSYSTALDALRLLKDK----------------------------------------E 449 (694)
T ss_pred eeeEEEEECcCCCcCCC-----CccCHHHHHHHHHHHHc----------------------------------------C
Confidence 56899999999999832 35677899999999988 9
Q ss_pred CeEEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCC-------------c--eeecCCChhHHHHHHHHHHHHHhh
Q psy2719 622 VNIGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDG-------------T--KFVHPVPKEYAEKLRQLIKALQDE 684 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~-------------~--~~~~~~~~~~~~~v~~i~~~~~~~ 684 (808)
+.|+++|||+...+..++... ..++|++||+.|+.+++ . .+...++.+ .++++++...+.
T Consensus 450 I~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~e---~i~~IL~~lke~ 526 (694)
T PRK14502 450 LPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAYK---DIRHILKKALAE 526 (694)
T ss_pred CeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCCHH---HHHHHHHHHHHh
Confidence 999999999999887766421 24799999999997653 1 233455554 455666555442
Q ss_pred cc--------CCCcEEEecCc-------------------------EEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEc
Q psy2719 685 VC--------HDGAWIENKGV-------------------------LLTFHYRETPIERREYIIDRASQIFLEAGFEPHN 731 (808)
Q Consensus 685 ~~--------~~g~~ie~k~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 731 (808)
.. ....++..... ...+.+.. + ++.++++.+.+...++.+..
T Consensus 527 l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~g-d----~e~Leel~~~L~~~~l~v~~ 601 (694)
T PRK14502 527 ACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEG-D----KRSTNIVLNHIQQSGLEYSF 601 (694)
T ss_pred hcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcC-C----HHHHHHHHHHHHHcCcEEEE
Confidence 10 01111211100 00000000 0 12334444555545777777
Q ss_pred cCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEE--e----CHHHHHhccCCccEEEeCC
Q psy2719 732 ALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYA--G----NEDAMLALQGIACTFRVDS 791 (808)
Q Consensus 732 g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~--G----D~~Mf~~~~~~~~~vav~~ 791 (808)
+..++||. + ++|||+|++.|++. ++++.+ ++++| | |++||++++ ++|+|++
T Consensus 602 g~rfleI~-~-gvdKG~AL~~L~e~-~gI~~~---eViafalGDs~NDisMLe~Ag---~gVAM~~ 658 (694)
T PRK14502 602 GGRFYEVT-G-GNDKGKAIKILNEL-FRLNFG---NIHTFGLGDSENDYSMLETVD---SPILVQR 658 (694)
T ss_pred CCEEEEeC-C-CCCHHHHHHHHHHH-hCCCcc---ceEEEEcCCcHhhHHHHHhCC---ceEEEcC
Confidence 99999998 6 89999999999996 898865 68888 7 999999995 4599986
No 97
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.72 E-value=1.1e-16 Score=180.67 Aligned_cols=186 Identities=12% Similarity=0.078 Sum_probs=128.3
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCc--cccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRL--DYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl--~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
.++.+||||||++.+...... ...+...++++|++|+|. ++.||+..+++|+.++ .+ ++.|+++|.+...
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~-~~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~ivG~g~~~ 283 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAEL-PPVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTFGKFSPF 283 (405)
T ss_pred CCEEEeCCCcCcccccccccc-cccccCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEEcCCCcc
Confidence 578899999997543221111 011111466789999994 4789999999999875 22 3568888753210
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC-CCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGC-IGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~-v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
.. ..+.+ .|. .+.+++..+|+.||+||+||..||||++++|||||+ .|
T Consensus 284 -------~~-------------------~~v~~-~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G----~P 332 (405)
T PRK10125 284 -------TA-------------------GNVVN-HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG----VP 332 (405)
T ss_pred -------cc-------------------cceEE-ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC----CC
Confidence 00 02333 343 367899999999999999999999999999999996 56
Q ss_pred EEEcCCCCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHH
Q psy2719 438 LILSPFAGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 438 vVlS~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 507 (808)
||+|+.+|+.+.+. +|++|+|.|++++|+++...+.. ........++++++ ..+++..-++++++..+
T Consensus 333 VVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~--~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 333 VIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQ--AVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred EEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHH--HhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999877774 59999999999999864322210 00001123344444 56899998888887654
No 98
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.72 E-value=3e-16 Score=171.72 Aligned_cols=180 Identities=19% Similarity=0.223 Sum_probs=130.9
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++|+|+|++.|.+.. .++..|+++||+.+.||++.+++|+++ ++ +.|+++|.+..
T Consensus 150 ~~~~vi~ngvd~~~~~~~~---------~~~~~i~~~Gr~~~~Kg~~~li~~~~~-----~~----~~l~i~G~~~~--- 208 (335)
T cd03802 150 PWVATVHNGIDLDDYPFRG---------PKGDYLLFLGRISPEKGPHLAIRAARR-----AG----IPLKLAGPVSD--- 208 (335)
T ss_pred cccEEecCCcChhhCCCCC---------CCCCEEEEEEeeccccCHHHHHHHHHh-----cC----CeEEEEeCCCC---
Confidence 5788999999999886521 245689999999999999999999754 23 45777775431
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~vV 439 (808)
.+ .+...+.+... ++ +-+.+.|.++.+++..+|+.||++++||. .||||++++|||||+ .|+|
T Consensus 209 ~~--~~~~~~~~~~~-~~---------~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G----~PvI 272 (335)
T cd03802 209 PD--YFYREIAPELL-DG---------PDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACG----TPVI 272 (335)
T ss_pred HH--HHHHHHHHhcc-cC---------CcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcC----CCEE
Confidence 11 12222222110 11 22456799999999999999999999997 599999999999996 5699
Q ss_pred EcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 440 LSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 440 lS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
+|+.+|..+.+. +|+++++ +++++++|.+++.++.+.. .+....+++++.-++++++.
T Consensus 273 ~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~~~------~~~~~~~~s~~~~~~~~~~~ 333 (335)
T cd03802 273 AFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRAAC------RRRAERRFSAARMVDDYLAL 333 (335)
T ss_pred EeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHHHH------HHHHHHhCCHHHHHHHHHHH
Confidence 999988888774 4899987 9999999999976532211 11123567887777776654
No 99
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.72 E-value=9.7e-16 Score=169.09 Aligned_cols=200 Identities=19% Similarity=0.242 Sum_probs=149.0
Q ss_pred cCeEEEEEEeecCcCccccchhhcCch-hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAP-ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~-~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
.....++.++|+|+|...+.+...... ..... .++.+|+++||+.+.||++.+++|+.++.+. |++ .|+++|.
T Consensus 184 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~~----~l~i~G~ 258 (394)
T cd03794 184 GVPPEKISVIPNGVDLELFKPPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-PDI----RFLIVGD 258 (394)
T ss_pred CCCcCceEEcCCCCCHHHcCCccchhhhhhccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhc-CCe----EEEEeCC
Confidence 344568899999999887765432110 00011 5678999999999999999999999998776 554 4777763
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCC-----ChhHHHHHH
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGM-----NLVAKEYVA 429 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~-----gLv~~Eama 429 (808)
+ +....+ .+++...+ ...+.+ .|.++.+++..+|+.||++++||..|++ +++++|||+
T Consensus 259 ~-----~~~~~~----~~~~~~~~-------~~~v~~-~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~ 321 (394)
T cd03794 259 G-----PEKEEL----KELAKALG-------LDNVTF-LGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMA 321 (394)
T ss_pred c-----ccHHHH----HHHHHHcC-------CCcEEE-eCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHH
Confidence 2 222222 23222211 124554 5699999999999999999999999876 667899999
Q ss_pred hccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-cCCHHHHHHHHH
Q psy2719 430 CQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQ-QLDVNHWMNSFL 503 (808)
Q Consensus 430 ~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l 503 (808)
|+ .|+|+|..+|..+.+. .|+++++.|+++++++|.++++. ++++.+..+++++++. .++++.++++++
T Consensus 322 ~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 322 AG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD-PEERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred CC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 95 5799999998888874 49999999999999999999964 5566666667777776 789999888763
No 100
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.71 E-value=7.9e-18 Score=190.53 Aligned_cols=92 Identities=17% Similarity=0.485 Sum_probs=72.8
Q ss_pred CCchhHhhHHHHhc-CCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCccccccc
Q psy2719 1 AGGLVTAVAPVVID-CKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLF 79 (808)
Q Consensus 1 ~GGL~~al~~~~~~-~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~ 79 (808)
+|||++||++++++ .+|+||||+|...++..+ ...+. .......++|.||+|+++++++||+||||++|||+|
T Consensus 25 ~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~---~~~~~---~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlf 98 (487)
T TIGR02398 25 PNGIIPTLLSFFGDGRAGTWVAWAEHDENSGET---FDSHM---TVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPIL 98 (487)
T ss_pred CCchHHHHHHHhhcccceEEEeeCCCCcccccc---ccccc---ccccCCceeEEEEeCCHHHHHHHHhhhhhccccccc
Confidence 59999999999964 789999999964211000 00000 011234678999999999999999999999999999
Q ss_pred ccCccccccCcccchhhhh
Q psy2719 80 HSMPDRAVFNAETWKVSHL 98 (808)
Q Consensus 80 H~~~~~~~~~~~~w~~y~~ 98 (808)
||+++.+.|++.+|+.|+.
T Consensus 99 H~~~~~~~~~~~~w~~Y~~ 117 (487)
T TIGR02398 99 HTFPERFQFREDDWQVFLK 117 (487)
T ss_pred cCCccccCcCHHHHHHHHH
Confidence 9999999999999999974
No 101
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.70 E-value=1.4e-15 Score=168.08 Aligned_cols=193 Identities=16% Similarity=0.113 Sum_probs=140.0
Q ss_pred EEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHH
Q psy2719 284 KALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEY 363 (808)
Q Consensus 284 ~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~ 363 (808)
.++|+|+|...+.+.... .......+++.|+++||+.+.||+..+++|+.++.. ++.|+++|.+...
T Consensus 167 ~~i~ngv~~~~~~~~~~~-~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~l~ivG~~~~~----- 233 (363)
T cd04955 167 TYIPYGADHVVSSEEDEI-LKKYGLEPGRYYLLVGRIVPENNIDDLIEAFSKSNS-------GKKLVIVGNADHN----- 233 (363)
T ss_pred eeeCCCcChhhcchhhhh-HHhcCCCCCcEEEEEecccccCCHHHHHHHHHhhcc-------CceEEEEcCCCCc-----
Confidence 789999998876541110 000001344578899999999999999999987632 3568888854321
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC-CCCChhHHHHHHhccCCCceEEEcC
Q psy2719 364 KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR-DGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 364 ~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~-EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
.++.+.+.+ ..+ . .+.+.+.|.++.+++..+|+.||++++||.. ||||++++|||||+ .|+|+|+
T Consensus 234 ~~~~~~~~~---~~~----~---~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~ 299 (363)
T cd04955 234 TPYGKLLKE---KAA----A---DPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYG----CPVLASD 299 (363)
T ss_pred chHHHHHHH---HhC----C---CCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcC----CCEEEec
Confidence 123333332 111 1 1234567999999999999999999999999 99999999999995 5699999
Q ss_pred CCCCccccC-ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-cCCHHHHHHHHHHHH
Q psy2719 443 FAGAGGMMH-EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQ-QLDVNHWMNSFLSSM 506 (808)
Q Consensus 443 ~~G~~~~l~-~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~l 506 (808)
.+|..+.+. +|.+++|.|. ++++|.++++.+ +.+.....+.++.+. .++++.-++++++.+
T Consensus 300 ~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 300 NPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred CCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 888877775 5899988776 999999999865 445555555666665 478888888887654
No 102
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.70 E-value=6e-16 Score=174.66 Aligned_cols=192 Identities=17% Similarity=0.204 Sum_probs=138.8
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHH----HHHHHHHHhCCCccCcEEEEEEEcC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRI----KAFERLLEKHPEYVEKVTFLQISVP 355 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l----~A~~~ll~~~p~~~~~v~lv~ig~~ 355 (808)
..++.++|+|||++.|.+........ ..++++|+++||+++.||++.++ +++..+.+++|+++ |+++|.+
T Consensus 195 ~~~v~vipngvd~~~f~~~~~~~~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~g 268 (397)
T TIGR03087 195 AGRITAFPNGVDADFFSPDRDYPNPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGAK 268 (397)
T ss_pred CCCeEEeecccchhhcCCCccccCCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECCC
Confidence 45788999999999887542211000 13567899999999999999888 56666777788764 7777743
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCC
Q psy2719 356 SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 356 ~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~ 434 (808)
. . .+++++. .. ..| .+.|.++ ++..+|+.||++|+||. .|||+++++|||||+
T Consensus 269 ~-----~-----~~~~~l~----~~------~~V-~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G--- 322 (397)
T TIGR03087 269 P-----S-----PAVRALA----AL------PGV-TVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA--- 322 (397)
T ss_pred C-----h-----HHHHHhc----cC------CCe-EEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC---
Confidence 2 1 1223321 11 124 4568886 68899999999999996 699999999999996
Q ss_pred CceEEEcCCCCCcccc---CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHH
Q psy2719 435 PGVLILSPFAGAGGMM---HEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l---~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 507 (808)
.|+|+|..++ .... ..|++++ .|++++|++|.+++++ ++.+++..+++++++ +.++|+..++++.+.+.
T Consensus 323 -~PVV~t~~~~-~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 323 -KPVVASPEAA-EGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred -CCEEecCccc-ccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 4688887532 2221 2488886 8999999999999984 455666667778777 57899999998877664
No 103
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.70 E-value=3.9e-16 Score=172.88 Aligned_cols=172 Identities=19% Similarity=0.214 Sum_probs=129.8
Q ss_pred EEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHH
Q psy2719 283 VKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLE 362 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~ 362 (808)
..++|+|+|.+.|.+.. ...++++++||+.+.||++.+++|++++ | + .|+++|.+ ++
T Consensus 176 ~~vi~~~~d~~~~~~~~---------~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~----~l~ivG~g-----~~ 232 (351)
T cd03804 176 ATVIYPPVDTDRFTPAE---------EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-K----RLVVIGDG-----PE 232 (351)
T ss_pred cEEECCCCCHhhcCcCC---------CCCCEEEEEEcCccccChHHHHHHHHHC----C-C----cEEEEECC-----hh
Confidence 45789999998886532 1345799999999999999999999864 3 2 37777742 22
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC
Q psy2719 363 YKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 363 ~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
.+.+ ++ ... ..| .+.|.++.+++.++|+.||++++||. ||||++++|||||+ .|+|+|.
T Consensus 233 ~~~l----~~---~~~--------~~V-~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~ 291 (351)
T cd03804 233 LDRL----RA---KAG--------PNV-TFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYG 291 (351)
T ss_pred HHHH----Hh---hcC--------CCE-EEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeC
Confidence 2222 22 111 134 45799999999999999999999999 99999999999996 5699999
Q ss_pred CCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHH
Q psy2719 443 FAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSF 502 (808)
Q Consensus 443 ~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~ 502 (808)
.+|..+.+. .|++++|.|++++|++|..+++++. + ..+.+++.+..+++++..+++
T Consensus 292 ~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~-~---~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 292 KGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED-F---DPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred CCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc-c---CHHHHHHHHHhcCHHHHHHHh
Confidence 888887773 4999999999999999999998763 1 122344555667777665543
No 104
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.69 E-value=3.7e-16 Score=178.24 Aligned_cols=181 Identities=9% Similarity=0.059 Sum_probs=126.8
Q ss_pred cCcCccccchhhcCchhhhhc---CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHH
Q psy2719 288 IGIPFERFVQLAENAPENLKD---ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364 (808)
Q Consensus 288 ~GID~~~f~~~~~~~~~~~~~---~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~ 364 (808)
+|||++.|.+...... ..+. ...+.+++||||.+.||+..+|+|++.+.++.|++ .|+++|. +++
T Consensus 521 nGVDte~F~P~~r~~~-~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnv----rLvIVGD-----GP~-- 588 (794)
T PLN02501 521 HGVNPKFLKIGEKVAE-ERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGF----NLDVFGN-----GED-- 588 (794)
T ss_pred ccccccccCCcchhHH-HHhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCe----EEEEEcC-----Ccc--
Confidence 5999999987543211 1111 12345899999999999999999999988877765 4777774 333
Q ss_pred HHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCC
Q psy2719 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFA 444 (808)
Q Consensus 365 ~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~ 444 (808)
++++++++.+++. .+.| .|..+ +...+|+.+||||+||.+||||+|++|||||+ .|||+|+..
T Consensus 589 --reeLe~la~eLgL--------~V~F-LG~~d--d~~~lyasaDVFVlPS~sEgFGlVlLEAMA~G----lPVVATd~p 651 (794)
T PLN02501 589 --AHEVQRAAKRLDL--------NLNF-LKGRD--HADDSLHGYKVFINPSISDVLCTATAEALAMG----KFVVCADHP 651 (794)
T ss_pred --HHHHHHHHHHcCC--------EEEe-cCCCC--CHHHHHHhCCEEEECCCcccchHHHHHHHHcC----CCEEEecCC
Confidence 3444555555432 2443 45543 34579999999999999999999999999995 568888887
Q ss_pred CCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 445 GAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 445 G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
|. +.+. +|++ +.|+++++++|.++|..++ .+ .... ....+||..-++++++.-
T Consensus 652 G~-e~V~~g~nGll--~~D~EafAeAI~~LLsd~~-~r-l~~~----a~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 652 SN-EFFRSFPNCLT--YKTSEDFVAKVKEALANEP-QP-LTPE----QRYNLSWEAATQRFMEYS 707 (794)
T ss_pred CC-ceEeecCCeEe--cCCHHHHHHHHHHHHhCch-hh-hHHH----HHhhCCHHHHHHHHHHhh
Confidence 64 3342 4554 4799999999999998764 22 1111 133678888777776643
No 105
>PLN02275 transferase, transferring glycosyl groups
Probab=99.68 E-value=5.4e-16 Score=173.42 Aligned_cols=161 Identities=11% Similarity=0.098 Sum_probs=119.3
Q ss_pred EEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHH-----------------hCCCccC
Q psy2719 283 VKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLE-----------------KHPEYVE 345 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~-----------------~~p~~~~ 345 (808)
+.++|+|+ .+.|.+.... ... +.....+|+++||+.+.||++.+++|+..+.. ++|+
T Consensus 188 i~vi~n~~-~~~f~~~~~~-~~~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~--- 261 (371)
T PLN02275 188 ATVLYDQP-PEFFRPASLE-IRL-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR--- 261 (371)
T ss_pred eEEECCCC-HHHcCcCCch-hcc-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC---
Confidence 77889984 5777654221 111 11334678899999999999999999988742 2454
Q ss_pred cEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC---CCCCCCh
Q psy2719 346 KVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP---LRDGMNL 422 (808)
Q Consensus 346 ~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S---~~EG~gL 422 (808)
+.|+++|.+ ++ ++++++++.+.+. .+++++.+.++.++++.+|+.||++|+|+ ..||||+
T Consensus 262 -i~l~ivG~G-----~~----~~~l~~~~~~~~l-------~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~ 324 (371)
T PLN02275 262 -LLFIITGKG-----PQ----KAMYEEKISRLNL-------RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPM 324 (371)
T ss_pred -eEEEEEeCC-----CC----HHHHHHHHHHcCC-------CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccH
Confidence 568888853 22 3444555554432 25777777899999999999999999853 2489999
Q ss_pred hHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHh
Q psy2719 423 VAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRAL 472 (808)
Q Consensus 423 v~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L 472 (808)
+++|||||+ .|+|+|..+|..+.+. +|++|+ |++++|++|.++|
T Consensus 325 ~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 325 KVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 999999996 5688898888887773 599996 7999999998875
No 106
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.68 E-value=1.5e-17 Score=189.24 Aligned_cols=105 Identities=30% Similarity=0.631 Sum_probs=80.9
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||++++++.+|+||||+|...++.. ..+ ........+++|.||+|+++++++||+||||++|||+||
T Consensus 22 ~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~-----~~~--~~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H 94 (456)
T TIGR02400 22 AGGLAVALLGALKATGGVWFGWSGKTVEEDE-----GEP--FLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFH 94 (456)
T ss_pred CCCHHHHHHHHHhccCcEEEEeCCCCCCccc-----hhh--hHHHhhccCceEEEEECCHHHHHHHHHHhhhhhcchhhc
Confidence 5999999999999999999999996532110 000 000112346789999999999999999999999999999
Q ss_pred cCccccccCcccchhhhhhccc--------cccccceeeee
Q psy2719 81 SMPDRAVFNAETWKVSHLKMNG--------VTLEITGIWIG 113 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~k~~g--------~~~~~~~~wig 113 (808)
|+++.+.|++++|+.|+. +|. .......+||=
T Consensus 95 ~~~~~~~~~~~~w~~Y~~-vN~~fA~~i~~~~~~~d~vwvh 134 (456)
T TIGR02400 95 YRPDLIRYDRKAWEAYRR-VNRLFAEALAPLLQPGDIVWVH 134 (456)
T ss_pred ccccccccCHHHHHHHHH-HHHHHHHHHHHhCCCCCEEEEe
Confidence 999999999999999974 333 22344577864
No 107
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.67 E-value=5.8e-16 Score=153.28 Aligned_cols=154 Identities=29% Similarity=0.494 Sum_probs=116.2
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHh-CCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEK-HPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWS 387 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~-~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~ 387 (808)
.++++|+++||+.+.||+..+++|+..+.++ .|++ .|+++|.. + ....+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~~-----~----~~~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVGDG-----E----YKKELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEESHC-----C----HHHHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEccc-----c----ccccccccccccccc------c
Confidence 5789999999999999999999999999875 5554 57777621 1 223344444444321 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHH
Q psy2719 388 PIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAA 464 (808)
Q Consensus 388 ~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~l 464 (808)
.+.+ .+.++.+++.++|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+. +|++++|.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3444 577779999999999999999999999999999999995 6799999877777773 4899999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHh
Q psy2719 465 ANVLHRALCMPRDERELRMSQLR 487 (808)
Q Consensus 465 A~ai~~~L~~~~~e~~~r~~~~~ 487 (808)
+++|.++++++ +.+....++.+
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~ 170 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhc
Confidence 99999999854 33333333333
No 108
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.65 E-value=4.6e-15 Score=164.00 Aligned_cols=195 Identities=21% Similarity=0.261 Sum_probs=144.0
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccc--cCChHHHHHHHHHHHHh-CCCccCcEEEEEE
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDY--TKGLVHRIKAFERLLEK-HPEYVEKVTFLQI 352 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~--~KGi~~~l~A~~~ll~~-~p~~~~~v~lv~i 352 (808)
..++.++|+|+|++.|.+... ...++. .++++++++++... .||+..+++|++.+.++ .| ++.++++
T Consensus 158 ~~~~~vi~ngi~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~~~~i~ 231 (365)
T cd03825 158 GIPIEVIPNGIDTTIFRPRDK--REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DIELVVF 231 (365)
T ss_pred CCceEEeCCCCcccccCCCcH--HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----CeEEEEe
Confidence 357889999999988865322 111211 44566766666654 89999999999988665 34 3557777
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCC-HHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhc
Q psy2719 353 SVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIG-QEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 353 g~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~-~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~ 431 (808)
|.+.. . .. . .++ ..+.+.|.++ .+++..+|+.||++++||..||||++++|||+|+
T Consensus 232 G~~~~---~----~~----~---~~~---------~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g 288 (365)
T cd03825 232 GASDP---E----IP----P---DLP---------FPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACG 288 (365)
T ss_pred CCCch---h----hh----c---cCC---------CceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcC
Confidence 64321 0 00 0 111 1244568887 8899999999999999999999999999999995
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 507 (808)
.|+|+|+.+|..+.+. .|+++++.|+++++++|.++++. ++++.+...++++.+ ..++++..++++++.++
T Consensus 289 ----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 289 ----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLAD-PDEREELGEAARELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred ----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 5689999888887774 49999999999999999999974 444555555666666 46799999998887765
Q ss_pred c
Q psy2719 508 A 508 (808)
Q Consensus 508 ~ 508 (808)
+
T Consensus 364 ~ 364 (365)
T cd03825 364 E 364 (365)
T ss_pred h
Confidence 4
No 109
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.65 E-value=2.4e-15 Score=155.88 Aligned_cols=187 Identities=18% Similarity=0.183 Sum_probs=117.7
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
+|++|+||||++. ..++++++++|++|+++ |+.+
T Consensus 1 li~~DlDGTLl~~------~~~~~~~~~ai~~l~~~----------------------------------------G~~~ 34 (225)
T TIGR02461 1 VIFTDLDGTLLPP------GYEPGPAREALEELKDL----------------------------------------GFPI 34 (225)
T ss_pred CEEEeCCCCCcCC------CCCchHHHHHHHHHHHC----------------------------------------CCEE
Confidence 5899999999982 13566799999999988 9999
Q ss_pred EEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCC--------------c-eeecCCChhHHHHHHHHHHHHHhhccC
Q psy2719 625 GIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDG--------------T-KFVHPVPKEYAEKLRQLIKALQDEVCH 687 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~--------------~-~~~~~~~~~~~~~v~~i~~~~~~~~~~ 687 (808)
+++|||+...+..++... ..++|++||+.|+.+.+ . .+..+++.+ .++++++.+.+. .
T Consensus 35 vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~---~~~~il~~~~~~--~ 109 (225)
T TIGR02461 35 VFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPFPVGAGREVGNYEVIELGKPVA---KIRAALKEAENE--Y 109 (225)
T ss_pred EEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccccccccccCCCeEEEEcCCCHH---HHHHHHHHHHHh--c
Confidence 999999998887766421 23799999999987532 1 455667664 456666655542 0
Q ss_pred CCcEEEecCcE-EEEEcCcCChhh----------------HHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHH
Q psy2719 688 DGAWIENKGVL-LTFHYRETPIER----------------REYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRAS 750 (808)
Q Consensus 688 ~g~~ie~k~~~-~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av 750 (808)
+-.+...-... +. .+...+... .++...++.+.+...++.+..+..++++ ++ ++|||.|+
T Consensus 110 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ki~~~~~~e~~~~~~~~~~~~~~~~~~s~~~~~i-~~-~~sK~~al 186 (225)
T TIGR02461 110 GLKYYGNSTAEEVE-KLTGLPRELAPLAKRREYSETIFLWSREGWEAILVTARARGLKYTHGGRFYTV-HG-GSDKGKAI 186 (225)
T ss_pred CccchhcCCHHHHH-HHHCcCHHHHHHHHhhhcCCcccCCCHHHHHHHHHHHHHcCCcEEECCEEEEE-CC-CCCHHHHH
Confidence 10000000000 00 000000000 0111222333333446677666667775 66 99999999
Q ss_pred HHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC
Q psy2719 751 IHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD 790 (808)
Q Consensus 751 ~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~ 790 (808)
+.+++. +++..+. .++++|| |++||+.++ .| |+||
T Consensus 187 ~~l~~~-~~~~~~~-~~~i~~GD~~nD~~ml~~ag-~~--v~v~ 225 (225)
T TIGR02461 187 KRLLDL-YKLRPGA-IESVGLGDSENDFPMFEVVD-LA--FLVG 225 (225)
T ss_pred HHHHHH-hccccCc-ccEEEEcCCHHHHHHHHhCC-Cc--EecC
Confidence 999986 7664322 2799999 999999995 44 7664
No 110
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.65 E-value=3.2e-15 Score=162.34 Aligned_cols=168 Identities=20% Similarity=0.198 Sum_probs=123.5
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
..++.++|+|+|.+.+.+............++.+|+++||+.+.||+..+++|++.+.+++|++ .|+++|.+.
T Consensus 158 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~----~l~i~G~~~--- 230 (353)
T cd03811 158 PDKIEVIYNPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDA----RLVILGDGP--- 230 (353)
T ss_pred ccccEEecCCcChhhcCcccchhhhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCc----eEEEEcCCc---
Confidence 5688999999999887654321100000156789999999999999999999999998876654 477777432
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
.. +++++++...+.. +.+.+.|.+ +++..+|+.||++++||..||||++++|||+|+ .|+|
T Consensus 231 --~~----~~~~~~~~~~~~~-------~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G----~PvI 291 (353)
T cd03811 231 --LR----EELEALAKELGLA-------DRVHFLGFQ--SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALG----TPVV 291 (353)
T ss_pred --cH----HHHHHHHHhcCCC-------ccEEEeccc--CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhC----CCEE
Confidence 12 2333444444321 334455664 468899999999999999999999999999996 5699
Q ss_pred EcCCCCCccccC---ceEEECCCCHHHHH---HHHHHHhC
Q psy2719 440 LSPFAGAGGMMH---EALLVNPYEIDAAA---NVLHRALC 473 (808)
Q Consensus 440 lS~~~G~~~~l~---~~llvnP~d~~~lA---~ai~~~L~ 473 (808)
+|+.+|..+.+. .|+++++.|.++++ ++|...+.
T Consensus 292 ~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 331 (353)
T cd03811 292 ATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLL 331 (353)
T ss_pred EcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccC
Confidence 999988887774 49999999999994 55555554
No 111
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.61 E-value=5.2e-14 Score=158.90 Aligned_cols=203 Identities=16% Similarity=0.194 Sum_probs=146.5
Q ss_pred EEEEEEeecCcCccccchhhcC----------ch-------hhhhc------CCCeEEEEEcCccccCChHHHHHHHHHH
Q psy2719 280 TVHVKALPIGIPFERFVQLAEN----------AP-------ENLKD------ENLKVILGVDRLDYTKGLVHRIKAFERL 336 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~----------~~-------~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~l 336 (808)
.-++.-|-||||.+.+.|.... .+ .+..+ .+.+++..|+|+...||++.+++|+..+
T Consensus 240 ~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~ 319 (487)
T COG0297 240 SGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDEL 319 (487)
T ss_pred cccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHH
Confidence 3567778899998776653211 00 11111 3569999999999999999999999999
Q ss_pred HHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC
Q psy2719 337 LEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL 416 (808)
Q Consensus 337 l~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~ 416 (808)
+++. + .||++|.+. ..++..+..++.++.+++ .+.-..+..-...+|+.||++++||.
T Consensus 320 l~~~--~----~~vilG~gd-------~~le~~~~~la~~~~~~~---------~~~i~~~~~la~~i~agaD~~lmPSr 377 (487)
T COG0297 320 LEQG--W----QLVLLGTGD-------PELEEALRALASRHPGRV---------LVVIGYDEPLAHLIYAGADVILMPSR 377 (487)
T ss_pred HHhC--c----eEEEEecCc-------HHHHHHHHHHHHhcCceE---------EEEeeecHHHHHHHHhcCCEEEeCCc
Confidence 9986 3 377777542 257777888887765432 22233355556789999999999999
Q ss_pred CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-----------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q psy2719 417 RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-----------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQ 485 (808)
Q Consensus 417 ~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-----------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~ 485 (808)
.||+||+-++||.-+ +++|+++.+|.++.+. +|+++.|.|+++++.+|.+++..-..... .++.
T Consensus 378 fEPcGL~ql~amryG----tvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~ 452 (487)
T COG0297 378 FEPCGLTQLYAMRYG----TLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRK 452 (487)
T ss_pred CcCCcHHHHHHHHcC----CcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHH
Confidence 999999999999984 6899999999998873 38999999999999999999875322111 1333
Q ss_pred HhHHH--hcCCHHHHHHHHHHHHHcc
Q psy2719 486 LRHRE--QQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 486 ~~~~v--~~~~~~~W~~~~l~~l~~~ 509 (808)
.+... ..++|+.=+.++++--+.+
T Consensus 453 ~~~~~m~~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 453 VQPNAMGADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHhhcccccCchhHHHHHHHHHHHH
Confidence 33333 3556777777776665554
No 112
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.61 E-value=3.3e-16 Score=189.10 Aligned_cols=92 Identities=32% Similarity=0.706 Sum_probs=75.3
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||++++++.+|+||||+|...+.. ++.. ...+...+..++|+||+|+++++++||+||||++|||+||
T Consensus 27 ~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~----~~~~--~~~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H 100 (726)
T PRK14501 27 VGGLATGLRSFHERGGGLWVGWPGLDLEEE----SEEQ--RARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFH 100 (726)
T ss_pred CCchHHHHHHHhhcCCeEEEEeCCCCcccc----chhh--hhhhhhhccCceEEEEeCCHHHHHHHHHHhhhccccchhc
Confidence 599999999999999999999999653211 0000 0111223457899999999999999999999999999999
Q ss_pred cCccccccCcccchhhhh
Q psy2719 81 SMPDRAVFNAETWKVSHL 98 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~ 98 (808)
|+++...|++.+|+.|+.
T Consensus 101 ~~~~~~~~~~~~w~~Y~~ 118 (726)
T PRK14501 101 YFPEYTEFEDRFWESYER 118 (726)
T ss_pred ccCcccCcCHHHHHHHHH
Confidence 999999999999999974
No 113
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.61 E-value=2.5e-14 Score=149.39 Aligned_cols=189 Identities=16% Similarity=0.198 Sum_probs=122.7
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|+||+|+||||++.. ..+++.++++|++|+++ |+.
T Consensus 2 KLIftDLDGTLLd~~-----~~~~~~a~~aL~~Lk~~----------------------------------------GI~ 36 (302)
T PRK12702 2 RLVLSSLDGSLLDLE-----FNSYGAARQALAALERR----------------------------------------SIP 36 (302)
T ss_pred cEEEEeCCCCCcCCC-----CcCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 699999999999843 35788899999999988 999
Q ss_pred EEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCCce---------------eecCCChhHHHHHHHHHHHHHhhc-
Q psy2719 624 IGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDGTK---------------FVHPVPKEYAEKLRQLIKALQDEV- 685 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~~~---------------~~~~~~~~~~~~v~~i~~~~~~~~- 685 (808)
|+++|||+...+..+.... ..++|++||+.|+.+.... +...+... ...++.+++...+..
T Consensus 37 vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~~~~~~~~~~~~~~~~~~~~lg~~-y~~ir~~L~~l~~~~~ 115 (302)
T PRK12702 37 LVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYFPAGILDEQWQHRPPYYVCALGLP-YPCLRHILQQVRQDSH 115 (302)
T ss_pred EEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccccccccccccccccCCCceEEecCCC-HHHHHHHHHHHHHHhC
Confidence 9999999999887766421 2489999999998764311 01111111 234555555444321
Q ss_pred ---c------------CCCcEEE------ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeC----
Q psy2719 686 ---C------------HDGAWIE------NKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKP---- 740 (808)
Q Consensus 686 ---~------------~~g~~ie------~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p---- 740 (808)
. ..|.-.+ .++++-.+.+...+. ...+.+...++.++.|..|+.++.
T Consensus 116 ~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w~~~~~--------~~~~~~~~~g~~~~~GgRf~H~l~~~~~ 187 (302)
T PRK12702 116 LDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSYSGDPA--------RLREAFAQQEANLTQHLLRLHQLHFSDL 187 (302)
T ss_pred CCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEecCCHH--------HHHHHHHHcCCeEEecCceEEecccccc
Confidence 0 0011111 234444444444321 115556667888888887887773
Q ss_pred ----------------CCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC
Q psy2719 741 ----------------PVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS 791 (808)
Q Consensus 741 ----------------~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~ 791 (808)
+-+.+||.|++.|.+. |.-... ...++++| |++||+++. ++ |-|.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~-y~~~~~-~~~tiaLGDspND~~mLe~~D-~~--vvi~~ 253 (302)
T PRK12702 188 PQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDC-YQRHLG-PIKALGIGCSPPDLAFLRWSE-QK--VVLPS 253 (302)
T ss_pred cccccccccccccccccCCCCHHHHHHHHHHH-HHhccC-CceEEEecCChhhHHHHHhCC-ee--EEecC
Confidence 0167999999999986 543321 22578888 999999995 44 77764
No 114
>KOG1111|consensus
Probab=99.59 E-value=1.4e-14 Score=151.36 Aligned_cols=167 Identities=19% Similarity=0.297 Sum_probs=130.6
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
...++.+|||-++++.|.|.+.+.+ ..+...|+.++||.+.||++.+++.+.++.+++|+.+ ++++|.
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~~~----S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fii~GD---- 234 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAADKP----SADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FIIIGD---- 234 (426)
T ss_pred CHhHeeeccceeeccccccCccccC----CCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EEEecC----
Confidence 4578999999999999998544311 1445789999999999999999999999999999875 777763
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
+|..-.+++-+++. +. ..+++ +.|.++.+++...|...|||+.||+.|.||++++||+.|+ -++
T Consensus 235 -GPk~i~lee~lEk~----~l------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScG----L~V 298 (426)
T KOG1111|consen 235 -GPKRIDLEEMLEKL----FL------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCG----LPV 298 (426)
T ss_pred -CcccchHHHHHHHh----hc------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCC----CEE
Confidence 44333344333333 11 12454 5699999999999999999999999999999999999995 457
Q ss_pred EEcCCCCCccccCce-EEECCCCHHHHHHHHHHHhC
Q psy2719 439 ILSPFAGAGGMMHEA-LLVNPYEIDAAANVLHRALC 473 (808)
Q Consensus 439 VlS~~~G~~~~l~~~-llvnP~d~~~lA~ai~~~L~ 473 (808)
|.+..+|..+.|... +...+-.++++++++.++++
T Consensus 299 VsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 299 VSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred EEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 777777888888755 43555578899999888886
No 115
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.58 E-value=3.8e-15 Score=156.48 Aligned_cols=158 Identities=14% Similarity=0.277 Sum_probs=96.9
Q ss_pred CCCeEEEEeCCChhhHHHhcC---c-cceEEEcccceeEecCCCc----eeecCCChhHHH-HHHHHHHHHHhhccCCCc
Q psy2719 620 PDVNIGIISGRTLENLMKMVN---I-EKVTYAGSHGLEILHPDGT----KFVHPVPKEYAE-KLRQLIKALQDEVCHDGA 690 (808)
Q Consensus 620 pg~~v~I~SGR~~~~l~~~~~---~-~~~~li~~nG~~i~~~~~~----~~~~~~~~~~~~-~v~~i~~~~~~~~~~~g~ 690 (808)
+++.++++|||+.....+.+. + .+.++|+++|+.|+..... .|...+...|.. .+++++..+ ++.
T Consensus 34 ~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~------~~l 107 (247)
T PF05116_consen 34 PEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAEL------PGL 107 (247)
T ss_dssp CGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCH------CCE
T ss_pred CCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHh------hCc
Confidence 489999999999998877663 2 3468999999999873211 122233333322 233333322 222
Q ss_pred EE----EecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCee--E-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCC
Q psy2719 691 WI----ENKGVLLTFHYRETPIERREYIIDRASQIFLEAGFE--P-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWS 763 (808)
Q Consensus 691 ~i----e~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~ 763 (808)
.. +...+.+++.+..... ...++++++.+...++. + .++..+++|.|+ ++|||.||++|+++ ++++.+
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~---~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~-~a~K~~Al~~L~~~-~~~~~~ 182 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDS---ADILEEIRARLRQRGLRVNVIYSNGRDLDILPK-GASKGAALRYLMER-WGIPPE 182 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSH---CHHHHHHHHHHHCCTCEEEEEECTCCEEEEEET-T-SHHHHHHHHHHH-HT--GG
T ss_pred ccCCccccCCeeEEEEEecccc---hhHHHHHHHHHHHcCCCeeEEEccceeEEEccC-CCCHHHHHHHHHHH-hCCCHH
Confidence 21 2234455665544332 22356677777665554 3 467789999998 99999999999997 899865
Q ss_pred cceeEEEEe----CHHHHHhccCCccEEEeCCC-Cc
Q psy2719 764 ERVRIIYAG----NEDAMLALQGIACTFRVDSS-PT 794 (808)
Q Consensus 764 ~~~~via~G----D~~Mf~~~~~~~~~vav~~~-~~ 794 (808)
.++++| |++||... ..+|.|+|+ ++
T Consensus 183 ---~vl~aGDSgND~~mL~~~---~~~vvV~Na~~e 212 (247)
T PF05116_consen 183 ---QVLVAGDSGNDLEMLEGG---DHGVVVGNAQPE 212 (247)
T ss_dssp ---GEEEEESSGGGHHHHCCS---SEEEE-TTS-HH
T ss_pred ---HEEEEeCCCCcHHHHcCc---CCEEEEcCCCHH
Confidence 799999 99999554 345999984 44
No 116
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.57 E-value=2.8e-16 Score=178.42 Aligned_cols=106 Identities=35% Similarity=0.733 Sum_probs=71.8
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.+++++.+|+||||+|...+... .. ..........+++|+||+|+++++++||+||||++|||+||
T Consensus 31 ~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~-----~~-~~~v~~~~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH 104 (474)
T PF00982_consen 31 AGGLVSALDPLLKKRGGIWVGWPGVDVDEEE-----DE-QDRVEPRLLDEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFH 104 (474)
T ss_dssp S-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---------EEEE---ETTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHT
T ss_pred CCcHHHHHHHHHhcCCCEEEEeCCCcCcccc-----cc-ccchhhhcccCceEEEEEcCHHHHHHHHHhhhhhccCcccc
Confidence 5899999999999999999999987653211 00 01111233568899999999999999999999999999999
Q ss_pred cCcc----ccccCcccchhhhhhccc--------cccccceeeee
Q psy2719 81 SMPD----RAVFNAETWKVSHLKMNG--------VTLEITGIWIG 113 (808)
Q Consensus 81 ~~~~----~~~~~~~~w~~y~~k~~g--------~~~~~~~~wig 113 (808)
|+.+ ...|+.++|+.|+. +|. ...+...+||=
T Consensus 105 y~~~~~~~~~~~~~~~w~~Y~~-vN~~FA~~i~~~~~~~D~VWVh 148 (474)
T PF00982_consen 105 YRLDSRPDLARFEEEWWEAYKR-VNRRFADAIAEVYRPGDLVWVH 148 (474)
T ss_dssp T-GG----G----HHHHHHHHH-HHHHHHHHHGGG--TT-EEEEE
T ss_pred cccccccccchhhHHHHHHHHH-HHHHHHHHHHHhCcCCCEEEEe
Confidence 7655 89999999999974 333 23455677875
No 117
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.57 E-value=6.4e-16 Score=185.30 Aligned_cols=89 Identities=34% Similarity=0.662 Sum_probs=70.7
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.++ +..+|+||||+|...+.. ++ .......+.+++|+||+|+++++++||+||||++|||+||
T Consensus 121 ~GGLvsaL~~~-~~~~~~WVGw~g~~~~~~------~~--~~~~~~~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfH 191 (934)
T PLN03064 121 AGGLVSALLGV-KEFEARWIGWAGVNVPDE------VG--QKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFH 191 (934)
T ss_pred CCCcHHHhccc-ccCCeEEEeeCCCCCCCc------ch--hHHHHHHhccCceEEEeCCHHHHHHHHHHhhhcccchhhc
Confidence 59999999998 889999999999653211 00 0111223457899999999999999999999999999999
Q ss_pred cC-------ccccccCcccchhhhh
Q psy2719 81 SM-------PDRAVFNAETWKVSHL 98 (808)
Q Consensus 81 ~~-------~~~~~~~~~~w~~y~~ 98 (808)
|+ ++..+|+..+|+.|+.
T Consensus 192 y~~~~~~~~~~~~~~~~~~w~~Y~~ 216 (934)
T PLN03064 192 YLGLPQEDRLATTRSFQSQFAAYKK 216 (934)
T ss_pred CcCCCcccccccccccHHHHHHHHH
Confidence 98 3456688899999974
No 118
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.56 E-value=1.7e-15 Score=173.53 Aligned_cols=104 Identities=38% Similarity=0.711 Sum_probs=82.5
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.+++++.+++||||+|...+... +. ........+++|.||+|+++++++||+||||++|||+||
T Consensus 27 ~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~-----~~---~~~~~~~~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H 98 (460)
T cd03788 27 AGGLATALKGLLKRTGGLWVGWSGIEEDEEE-----ED---EVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFH 98 (460)
T ss_pred CCcHHHHHHHHHhcCCeEEEEeCCCCCCccc-----ch---hhhhhhcCCceEEEeeCCHHHHHHHHHHhhhhhcchhhc
Confidence 5999999999999999999999987643211 00 011223457899999999999999999999999999999
Q ss_pred cCccccccCcccchhhhhhccc--------cccccceeeee
Q psy2719 81 SMPDRAVFNAETWKVSHLKMNG--------VTLEITGIWIG 113 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~k~~g--------~~~~~~~~wig 113 (808)
|+++...|+.++|+.|.. +|. .......+||-
T Consensus 99 ~~~~~~~~~~~~w~~Y~~-vN~~fa~~i~~~~~~~d~iwih 138 (460)
T cd03788 99 YRLDLARFDREDWEAYVR-VNRKFADAIAEVLRPGDLVWVH 138 (460)
T ss_pred CCCCccccCHHHHHHHHH-HHHHHHHHHHHhcCCCCEEEEe
Confidence 999999999999999974 333 22345677876
No 119
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.56 E-value=3.4e-13 Score=153.64 Aligned_cols=164 Identities=16% Similarity=0.070 Sum_probs=112.6
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCC-CCCC-
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFS-KPNW- 386 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g-~~~~- 386 (808)
.++++|+++++. .|+...+++||+++.+++|++ .|+++|. +++. .+++++++.+.+..+. ..+.
T Consensus 231 ~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~----~liivG~-----g~~r---~~~l~~~~~~~gl~~~~~~~~~ 296 (425)
T PRK05749 231 PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNL----LLILVPR-----HPER---FKEVEELLKKAGLSYVRRSQGE 296 (425)
T ss_pred CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCc----EEEEcCC-----Chhh---HHHHHHHHHhCCCcEEEccCCC
Confidence 466788898875 688999999999998888876 3776652 3332 1334444444332110 0000
Q ss_pred ----ccEEEEcCCCCHHHHHHHHHhcCeEEE-CCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcc----cc-CceEEE
Q psy2719 387 ----SPIRYIFGCIGQEELAALYRDSAIALV-TPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGG----MM-HEALLV 456 (808)
Q Consensus 387 ----~~v~~~~~~v~~~el~aly~~Adv~v~-~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~----~l-~~~llv 456 (808)
...+++.+ +..++..+|+.||++++ +|+.||+|++++|||||+ .|+|++...|... .+ .+|.++
T Consensus 297 ~~~~~~~v~l~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~ 370 (425)
T PRK05749 297 PPSADTDVLLGD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAI 370 (425)
T ss_pred CCCCCCcEEEEe--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeE
Confidence 01223322 35799999999999655 688899999999999996 4688776544322 22 358888
Q ss_pred CCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC
Q psy2719 457 NPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQL 493 (808)
Q Consensus 457 nP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~ 493 (808)
+|.|++++|++|.++++. ++.+.++.+++++++.++
T Consensus 371 ~~~d~~~La~~l~~ll~~-~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 371 QVEDAEDLAKAVTYLLTD-PDARQAYGEAGVAFLKQN 406 (425)
T ss_pred EECCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhC
Confidence 899999999999999974 556666667778777655
No 120
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.55 E-value=2.2e-15 Score=167.90 Aligned_cols=104 Identities=34% Similarity=0.659 Sum_probs=82.6
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.++++..+|+|+||+|..... . +..+ .......+++..||.++++++++||+||||++|||+||
T Consensus 43 ~ggL~~~l~~~~~~~~~~W~gw~G~~~~~-~----~~~~---~~~~~~~~~~~~~v~l~~~~~~~~Y~~fsn~iLWP~~H 114 (486)
T COG0380 43 AGGLVTALKPLLRVDGGTWIGWSGTTGPT-D----ESSD---DLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFH 114 (486)
T ss_pred CcchhhhcchhhHhhcceEEecCceeccc-c----ccch---hhhhccccceEEEEecCHHHHHHHHHHhhHhhhcceee
Confidence 69999999999999999999999976521 0 0000 01122347899999999999999999999999999999
Q ss_pred cCccccccCcccchhhhhhccc--------cccccceeeee
Q psy2719 81 SMPDRAVFNAETWKVSHLKMNG--------VTLEITGIWIG 113 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~k~~g--------~~~~~~~~wig 113 (808)
|+.+...|++.+|+.|+. +|. +.+....+||=
T Consensus 115 y~~~~~~~~~~~w~~Y~~-vN~~FAd~i~~~~~~gDiIWVh 154 (486)
T COG0380 115 YFIDDVAYERNWWDAYVK-VNRKFADKIVEIYEPGDIIWVH 154 (486)
T ss_pred eecCccccchHHHHHHHH-HHHHHHHHHHHhcCCCCEEEEE
Confidence 999999999999999974 333 22455677875
No 121
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.54 E-value=2.2e-15 Score=181.73 Aligned_cols=90 Identities=23% Similarity=0.431 Sum_probs=70.7
Q ss_pred CCchhHhhHHHHhc--CCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccc
Q psy2719 1 AGGLVTAVAPVVID--CKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPL 78 (808)
Q Consensus 1 ~GGL~~al~~~~~~--~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl 78 (808)
+|||+++|++++.. .+++||||+|...+. ++. .......+.+|+|+||+|+++++++||+||||++|||+
T Consensus 89 ~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~-------~~~-~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 89 ENSLLLQLKDGLGDDEIEVIYVGCLKEEIHL-------NEQ-EEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred CCchHHHHhhhhhcccCceEEEEecCCCCCc-------hhh-hhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 59999999999954 889999999864321 010 11111224568999999999999999999999999999
Q ss_pred cccCccc-----cccCcccchhhhh
Q psy2719 79 FHSMPDR-----AVFNAETWKVSHL 98 (808)
Q Consensus 79 ~H~~~~~-----~~~~~~~w~~y~~ 98 (808)
|||++.. .+|++.+|+.|+.
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~ 185 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVS 185 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHH
Confidence 9999643 3899999999974
No 122
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.51 E-value=4e-15 Score=179.55 Aligned_cols=88 Identities=34% Similarity=0.678 Sum_probs=67.8
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.++ ++.+|+||||+|...... ++ .......+.+++|+||+| ++++++||+||||++|||+||
T Consensus 38 ~ggl~~al~~~-~~~~~~Wvgw~g~~~~~~------~~--~~~~~~~~~~~~~~pv~l-~~~~~~~Y~gf~n~~LWPlfH 107 (797)
T PLN03063 38 PGGLVSALLGV-KEFETKWIGWPGVDVHDE------IG--KAALTESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFH 107 (797)
T ss_pred CCCHHHHHHHH-HhcCceEEEeCCCcCCcc------cc--hhHHHHHhhcCCeEEeeh-HHHHHHHHHHHHhhhcchhhc
Confidence 59999999998 778999999999642210 01 111122345789999999 999999999999999999999
Q ss_pred cCc-------cccccCcccchhhhh
Q psy2719 81 SMP-------DRAVFNAETWKVSHL 98 (808)
Q Consensus 81 ~~~-------~~~~~~~~~w~~y~~ 98 (808)
|++ +...+...+|+.|+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~w~~Y~~ 132 (797)
T PLN03063 108 YMGLPQEDRHDATRTFESQYDAYKK 132 (797)
T ss_pred CcCCCcccccccccccHHHHHHHHH
Confidence 982 345566789999874
No 123
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.47 E-value=2e-12 Score=144.79 Aligned_cols=192 Identities=17% Similarity=0.205 Sum_probs=128.0
Q ss_pred EEEEEeecCcCccccchhhcCch--hhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAP--ENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~--~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
.++.++|+|+|.+.|.+...... +.....++++|+++|++.+.++++ +|.++ .+.+|++ .|+++|....
T Consensus 173 ~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~-ll~~l---a~~~p~~----~~vliG~~~~- 243 (373)
T cd04950 173 PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLE-LLEAL---AKARPDW----SFVLIGPVDV- 243 (373)
T ss_pred CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHH-HHHHH---HHHCCCC----EEEEECCCcC-
Confidence 56888999999999976432211 111115678999999999966664 34333 3457776 4777774310
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC-----CCCCChhHHHHHHhccC
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL-----RDGMNLVAKEYVACQIR 433 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~-----~EG~gLv~~Eama~~~~ 433 (808)
.. +. ..+ .. ...|+ +.|.++.++++++|+.||++++|+. .+++++.++||||||.
T Consensus 244 -~~---~~----~~~----~~------~~nV~-~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~- 303 (373)
T cd04950 244 -SI---DP----SAL----LR------LPNVH-YLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK- 303 (373)
T ss_pred -cc---Ch----hHh----cc------CCCEE-EeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-
Confidence 00 01 111 10 12444 5699999999999999999999985 3578999999999964
Q ss_pred CCceEEEcCCCCCccccCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 434 EPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 434 ~~g~vVlS~~~G~~~~l~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
|+|+|....+.+. .++..+.+.|+++++++|.++|..+..++..+ ..+.++++||+.=++.++..|.+
T Consensus 304 ---PVVat~~~~~~~~-~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~---~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 304 ---PVVATPLPEVRRY-EDEVVLIADDPEEFVAAIEKALLEDGPARERR---RLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred ---CEEecCcHHHHhh-cCcEEEeCCCHHHHHHHHHHHHhcCCchHHHH---HHHHHHHCCHHHHHHHHHHHHHh
Confidence 5777765443332 23444456799999999999876544333222 22267889999988888876654
No 124
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.41 E-value=6.3e-11 Score=133.17 Aligned_cols=193 Identities=11% Similarity=0.046 Sum_probs=123.4
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHh----CCCccCcEEEE
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEK----HPEYVEKVTFL 350 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~----~p~~~~~v~lv 350 (808)
...++.+++++||.+.+.+. ......+++ +++++|+++||....|++..+++++..++.. .|+.+ .++
T Consensus 171 ~~~ki~v~g~~v~~~f~~~~-~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~---~~v 246 (382)
T PLN02605 171 EPSQIRVYGLPIRPSFARAV-RPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ---VVV 246 (382)
T ss_pred CHHHEEEECcccCHhhccCC-CCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---EEE
Confidence 44667788888886544322 111233332 4678999999999999999999999876521 23331 234
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHh
Q psy2719 351 QISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVAC 430 (808)
Q Consensus 351 ~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~ 430 (808)
++|. + + +++++++++.. + ..| .+.|+++ +++.+|++||++|.+| .|++++|||||
T Consensus 247 i~G~----~-~---~~~~~L~~~~~--~--------~~v-~~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~ 301 (382)
T PLN02605 247 ICGR----N-K---KLQSKLESRDW--K--------IPV-KVRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIR 301 (382)
T ss_pred EECC----C-H---HHHHHHHhhcc--c--------CCe-EEEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHc
Confidence 3431 1 1 23344433310 1 133 3567774 7999999999999866 37899999999
Q ss_pred ccCCCceEEEcCCC-----CCcccc-CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHH
Q psy2719 431 QIREPGVLILSPFA-----GAGGMM-HEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLS 504 (808)
Q Consensus 431 ~~~~~g~vVlS~~~-----G~~~~l-~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 504 (808)
+ .|+|++... |-++.+ .+|.-+.+.|+++++++|.++|.++++.++++.+++++....+.+..=++..++
T Consensus 302 g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 302 G----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHE 377 (382)
T ss_pred C----CCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence 6 468888752 323333 333334468999999999999986455555555666776666655555544443
No 125
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.39 E-value=2.5e-11 Score=130.74 Aligned_cols=200 Identities=25% Similarity=0.355 Sum_probs=141.6
Q ss_pred EEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChH
Q psy2719 282 HVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVL 361 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~ 361 (808)
++.++|+|++++.+..... .........+++++||+.+.||+...++|+..+.+..|+ +.++.+|.+...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~g~~~~~--- 242 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARI---GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIVGDGPER--- 242 (381)
T ss_pred CceEecCCcCHHHcCcccc---CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEEcCCCcc---
Confidence 5677899999988765200 011001136899999999999999999999999887665 446666643311
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEc
Q psy2719 362 EYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILS 441 (808)
Q Consensus 362 ~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS 441 (808)
...+..++...+. .+.+.+.|.++.+++..+|+.||++++||..||||++++|||||+ .|+|+|
T Consensus 243 -----~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g----~pvi~~ 306 (381)
T COG0438 243 -----REELEKLAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG----TPVIAS 306 (381)
T ss_pred -----HHHHHHHHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC----CcEEEC
Confidence 1222223333332 123344788888889999999999999999999999999999995 468999
Q ss_pred CCCCCccccCc---eEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 442 PFAGAGGMMHE---ALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 442 ~~~G~~~~l~~---~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
...|..+.+.+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..-++.+.+.+..
T Consensus 307 ~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 307 DVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYEE 376 (381)
T ss_pred CCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 98888887753 78888888999999999999875 33333333233334 567777766665555544
No 126
>KOG0853|consensus
Probab=99.39 E-value=1.9e-11 Score=136.22 Aligned_cols=213 Identities=15% Similarity=0.117 Sum_probs=151.3
Q ss_pred EEEeecCcCccccchhhcCc-----hhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCcc-CcEEEEEE
Q psy2719 283 VKALPIGIPFERFVQLAENA-----PENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYV-EKVTFLQI 352 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~-----~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~-~~v~lv~i 352 (808)
+.+...+||.+.+.+..... ..++.. ....++..+-|+.|.||+...|.||..+...-|+.. ....++..
T Consensus 236 ~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~ 315 (495)
T KOG0853|consen 236 ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVA 315 (495)
T ss_pred cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEe
Confidence 45556778877665321110 111111 336789999999999999999999999988776411 13445545
Q ss_pred EcC-CCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhc
Q psy2719 353 SVP-SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 353 g~~-~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~ 431 (808)
|.+ +.+...+..+...++.+++++.+.. | .++++....++.+...+++.+.+...+|..|.||+|++|||||+
T Consensus 316 g~~G~d~~~sen~~~~~el~~lie~~~l~-g-----~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g 389 (495)
T KOG0853|consen 316 GSRGYDERDSENVEYLKELLSLIEEYDLL-G-----QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG 389 (495)
T ss_pred cCCCccccchhhHHHHHHHHHHHHHhCcc-C-----ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC
Confidence 532 2233344445666777777776421 2 45667778888888888888889999998899999999999996
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHH---HHHHHHHHHhCCCHHHHHHHHHHHhHHHhc-CCHHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEID---AAANVLHRALCMPRDERELRMSQLRHREQQ-LDVNHWMNSFLS 504 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~---~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~ 504 (808)
.|+|++..+|..+++. +|++++| +.+ .+|++|.++.+.+ +.+.+...+.+++|.+ +++....+++..
T Consensus 390 ----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p-~l~~~~~~~G~~rV~e~fs~~~~~~ri~~ 463 (495)
T KOG0853|consen 390 ----LPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDP-ELWARMGKNGLKRVKEMFSWQHYSERIAS 463 (495)
T ss_pred ----CCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 5699999999999884 5999999 666 5999999999864 4577777788999987 666444444444
Q ss_pred HHH
Q psy2719 505 SMG 507 (808)
Q Consensus 505 ~l~ 507 (808)
.+.
T Consensus 464 ~~~ 466 (495)
T KOG0853|consen 464 VLG 466 (495)
T ss_pred HhH
Confidence 443
No 127
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.15 E-value=6.2e-10 Score=109.31 Aligned_cols=188 Identities=20% Similarity=0.239 Sum_probs=116.9
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++||+|+||||+++.-. ++.....|.+|.+. |+
T Consensus 7 ~~lIFtDlD~TLl~~~ye------~~pA~pv~~el~d~----------------------------------------G~ 40 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYE------WQPAAPVLLELKDA----------------------------------------GV 40 (274)
T ss_pred ceEEEEcccCcccCCCCC------CCccchHHHHHHHc----------------------------------------CC
Confidence 479999999999994332 34455677788776 99
Q ss_pred eEEEEeCCChhhH---HHhcCccceEEEcccceeEecCCCce-e-----------ecCCChhHHHHHHHHHHHHHhhccC
Q psy2719 623 NIGIISGRTLENL---MKMVNIEKVTYAGSHGLEILHPDGTK-F-----------VHPVPKEYAEKLRQLIKALQDEVCH 687 (808)
Q Consensus 623 ~v~I~SGR~~~~l---~~~~~~~~~~li~~nG~~i~~~~~~~-~-----------~~~~~~~~~~~v~~i~~~~~~~~~~ 687 (808)
.|++||..+..++ .+.++.++.++|+|||+.|+.|.+.. + ...+.. -.+.+++.++.+.+.
T Consensus 41 ~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~~~~~~~~~r~~~g~~~~elg~-~l~~ire~l~kLee~--- 116 (274)
T COG3769 41 PVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKGWFPFDGKPREISGISHIELGK-VLEKIREKLDKLEEH--- 116 (274)
T ss_pred eEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecccccccCCCCceecceEeeehhh-hHHHHHHHHHHHHHH---
Confidence 9999999998765 44567777899999999999764321 1 001111 012233333333321
Q ss_pred CCc-EEE----------------------ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCC
Q psy2719 688 DGA-WIE----------------------NKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKW 744 (808)
Q Consensus 688 ~g~-~ie----------------------~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v 744 (808)
-|. ++. .++++.++-.+..+ +...+....+...++.++.|..+.-|... ..
T Consensus 117 ~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~d-----~~~~~~~~~L~e~glt~v~garf~~v~~a-s~ 190 (274)
T COG3769 117 FGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSSD-----ERMAQFTARLNERGLTFVHGARFWHVLDA-SA 190 (274)
T ss_pred hCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecccc-----hHHHHHHHHHHhcCceEEeccceEEEecc-cc
Confidence 111 110 01111111111111 22344555566668998888888888765 66
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS 791 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~ 791 (808)
.||.|+..+++.+...... + -+++.| |.+||+... ++|.|++
T Consensus 191 gKg~Aa~~ll~~y~rl~~~-r-~t~~~GDg~nD~Pl~ev~d---~AfiV~~ 236 (274)
T COG3769 191 GKGQAANWLLETYRRLGGA-R-TTLGLGDGPNDAPLLEVMD---YAFIVKG 236 (274)
T ss_pred CccHHHHHHHHHHHhcCce-e-EEEecCCCCCcccHHHhhh---hheeecc
Confidence 7999999999964444433 1 489999 999999984 3488884
No 128
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.14 E-value=4.1e-09 Score=117.18 Aligned_cols=191 Identities=15% Similarity=0.100 Sum_probs=126.3
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHH-HHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRI-KAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l-~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
...++.++|+|+|.+.+.+.... .......+.++|+.+|+..+.|++..++ +|++++.+. | ..++++|.+.
T Consensus 152 ~~~~i~vi~n~v~~~~~~~~~~~-~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-~-----~~~~~~G~g~- 223 (357)
T PRK00726 152 FKPKAVVTGNPVREEILALAAPP-ARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPEA-L-----QVIHQTGKGD- 223 (357)
T ss_pred CCCCEEEECCCCChHhhcccchh-hhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhhC-c-----EEEEEcCCCc-
Confidence 34678999999998766542111 1110014677899999999999987776 888877432 2 2355555321
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
.+++++.+ . .+ . . +.+.+++ +++..+|+.||+++.+| | +.+++|||+|++ |
T Consensus 224 -----~~~~~~~~----~-~~-------~-~-v~~~g~~--~~~~~~~~~~d~~i~~~---g-~~~~~Ea~~~g~----P 274 (357)
T PRK00726 224 -----LEEVRAAY----A-AG-------I-N-AEVVPFI--DDMAAAYAAADLVICRA---G-ASTVAELAAAGL----P 274 (357)
T ss_pred -----HHHHHHHh----h-cC-------C-c-EEEeehH--hhHHHHHHhCCEEEECC---C-HHHHHHHHHhCC----C
Confidence 12232222 1 11 1 1 3345665 68899999999999887 3 589999999965 4
Q ss_pred EEEcCCCCC--------cccc---CceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHH
Q psy2719 438 LILSPFAGA--------GGMM---HEALLVNPYE--IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLS 504 (808)
Q Consensus 438 vVlS~~~G~--------~~~l---~~~llvnP~d--~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 504 (808)
+|++...|. ++.+ ..|++++|.| +++++++|.+++++ ++.+++..++.+++....+...=++.+++
T Consensus 275 vv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (357)
T PRK00726 275 AILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEE 353 (357)
T ss_pred EEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHH
Confidence 666544321 1233 2488999988 99999999999986 45555566667777777777777777766
Q ss_pred HHH
Q psy2719 505 SMG 507 (808)
Q Consensus 505 ~l~ 507 (808)
.++
T Consensus 354 ~~~ 356 (357)
T PRK00726 354 LAR 356 (357)
T ss_pred Hhh
Confidence 554
No 129
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.14 E-value=1.5e-08 Score=113.74 Aligned_cols=164 Identities=13% Similarity=0.131 Sum_probs=108.5
Q ss_pred CCe-EEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 310 NLK-VILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 310 ~~~-iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
+++ ++++.|++...||+..+++++.+ .|++ .++++++. +. .+++++++++.+.+ ..
T Consensus 201 ~~~~il~~~G~~~~~k~~~~li~~l~~----~~~~----~~viv~G~---~~----~~~~~l~~~~~~~~--------~~ 257 (380)
T PRK13609 201 NKKILLIMAGAHGVLGNVKELCQSLMS----VPDL----QVVVVCGK---NE----ALKQSLEDLQETNP--------DA 257 (380)
T ss_pred CCcEEEEEcCCCCCCcCHHHHHHHHhh----CCCc----EEEEEeCC---CH----HHHHHHHHHHhcCC--------Cc
Confidence 444 55667899889999999988742 3544 46656532 12 23445555543322 13
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCC-CCCc----ccc-CceEEECCCCHH
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPF-AGAG----GMM-HEALLVNPYEID 462 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~-~G~~----~~l-~~~llvnP~d~~ 462 (808)
|++ .|++ +++..+|++||+++. ++.|++++|||||+. |+|++.. .|.. ..+ ..|..+.+.|++
T Consensus 258 v~~-~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~----PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~ 326 (380)
T PRK13609 258 LKV-FGYV--ENIDELFRVTSCMIT----KPGGITLSEAAALGV----PVILYKPVPGQEKENAMYFERKGAAVVIRDDE 326 (380)
T ss_pred EEE-Eech--hhHHHHHHhccEEEe----CCCchHHHHHHHhCC----CEEECCCCCCcchHHHHHHHhCCcEEEECCHH
Confidence 554 4776 468899999999874 456999999999964 5777663 3321 122 235556678999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 463 AAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 463 ~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
+++++|.++++. ++.+.++.++.++....++++..++.+++.+..
T Consensus 327 ~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 327 EVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHV 371 (380)
T ss_pred HHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhh
Confidence 999999999985 445555555566666677888888877776654
No 130
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.13 E-value=3.1e-09 Score=118.64 Aligned_cols=225 Identities=10% Similarity=0.049 Sum_probs=128.9
Q ss_pred CCCEEEEecc-chHHHHHHHHhh-cCCEEEe----cc--------HHHHHHHHH-HHHHHhCc-eeecCCeEEEEcCeEE
Q psy2719 218 VVPVVWIHDY-QLLVAATTIRQV-AYDFVGF----HI--------EDYCLNFID-CCCRRLGS-RVDRNNMLVELAGRTV 281 (808)
Q Consensus 218 ~~dvvwihDy-hl~llp~~lr~~-~~dligf----~~--------~~~~~~fl~-~~~~~l~~-~~~~~~~~i~~~gr~~ 281 (808)
.+|+|++|.. ...+........ ..-++-. .+ .+..|+.+. .++.++.. +..++.+ ++.+....
T Consensus 86 ~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~~~~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l-~~~G~~~~ 164 (365)
T TIGR00236 86 KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGDRYSPMPEEINRQLTGHIADLHFAPTEQAKDNL-LRENVKAD 164 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCCCCCCCccHHHHHHHHHHHHhccCCCHHHHHHH-HHcCCCcc
Confidence 3799999954 433433333322 2222211 11 122344443 34555542 2222222 23344566
Q ss_pred EEEEeecCc-CccccchhhcCchhhhhc--CCCeEEEE-EcCc-cccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 282 HVKALPIGI-PFERFVQLAENAPENLKD--ENLKVILG-VDRL-DYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 282 ~v~v~p~GI-D~~~f~~~~~~~~~~~~~--~~~~iil~-V~Rl-~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
+|.++++|+ |...+.........++++ .++++++. ..|. ...||+..+++|+.++.+++|+++ +++++.|.
T Consensus 165 ~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~ 240 (365)
T TIGR00236 165 SIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN 240 (365)
T ss_pred cEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC
Confidence 899999996 533221111111222222 23344554 4464 345999999999999988888763 55554432
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
. . .+.++ ...++. ...| .+.+.++..++..+|+.||+++.+| |.+.+|||+|++
T Consensus 241 ~---~----~~~~~---~~~~~~------~~~v-~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~---- 294 (365)
T TIGR00236 241 P---V----VREPL---HKHLGD------SKRV-HLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK---- 294 (365)
T ss_pred h---H----HHHHH---HHHhCC------CCCE-EEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC----
Confidence 1 1 22222 222211 1134 4557889999999999999999988 556899999964
Q ss_pred eEEEc-CCCCCccccC--ceEEECCCCHHHHHHHHHHHhCC
Q psy2719 437 VLILS-PFAGAGGMMH--EALLVNPYEIDAAANVLHRALCM 474 (808)
Q Consensus 437 ~vVlS-~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~ 474 (808)
|+|++ +.+|..+.+. .++++ |.|+++++++|.++++.
T Consensus 295 PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~ 334 (365)
T TIGR00236 295 PVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTD 334 (365)
T ss_pred CEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhC
Confidence 57775 4444444442 36667 57999999999999974
No 131
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.12 E-value=2.5e-09 Score=118.19 Aligned_cols=181 Identities=16% Similarity=0.119 Sum_probs=114.9
Q ss_pred EEEeecCcCccccchhhcCchhhhhc-CCCeEEEEEcCccccCChHHH-HHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 283 VKALPIGIPFERFVQLAENAPENLKD-ENLKVILGVDRLDYTKGLVHR-IKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~~~~~~~-~~~~iil~V~Rl~~~KGi~~~-l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
..++|+|+|...+.+.... .. ... ++.++|+++||....|++..+ ++|++++.+. ++ .++.+++ +.
T Consensus 152 ~~~i~n~v~~~~~~~~~~~-~~-~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g----~~ 219 (348)
T TIGR01133 152 AVLVGNPVRQEIRSLPVPR-ER-FGLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG----KN 219 (348)
T ss_pred ceEEcCCcCHHHhcccchh-hh-cCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC----cc
Confidence 3688999997655432111 11 111 467789999999889997664 4788776543 22 2333332 11
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL 440 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl 440 (808)
+ . +++++.+.+.+. ..++.+. . .++..+|+.||++|.+| | +.+++|||+|+. |+|+
T Consensus 220 ~-~----~~l~~~~~~~~l-------~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~----Pvv~ 275 (348)
T TIGR01133 220 D-L----EKVKNVYQELGI-------EAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAGV----PAIL 275 (348)
T ss_pred h-H----HHHHHHHhhCCc-------eEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC----CEEE
Confidence 1 1 233444333221 1333332 2 27889999999999875 4 789999999964 5777
Q ss_pred cCCCCCc-------ccc---CceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHH
Q psy2719 441 SPFAGAG-------GMM---HEALLVNPYE--IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMN 500 (808)
Q Consensus 441 S~~~G~~-------~~l---~~~llvnP~d--~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~ 500 (808)
+...|.. +.+ ..|++++|.| +++++++|.++++. ++.++++.+++++++..+...+.++
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 276 IPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred eeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 7665432 234 2499999987 99999999999974 5556666666777776666555543
No 132
>KOG3189|consensus
Probab=99.09 E-value=1.8e-09 Score=104.25 Aligned_cols=199 Identities=21% Similarity=0.290 Sum_probs=135.6
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
.+-|+.||.||||++. ...+++++.+.|++|+..
T Consensus 10 ~~~l~lfdvdgtLt~~-----r~~~~~e~~~~l~~lr~~----------------------------------------- 43 (252)
T KOG3189|consen 10 EETLCLFDVDGTLTPP-----RQKVTPEMLEFLQKLRKK----------------------------------------- 43 (252)
T ss_pred CceEEEEecCCccccc-----cccCCHHHHHHHHHHhhh-----------------------------------------
Confidence 4568999999999983 457899999999998765
Q ss_pred CeEEEEeCCChhhHHHhcCc----cceEEEcccceeEecCCCceeecC----CChh-HHHHHHHHHHHHHhhc--cCCCc
Q psy2719 622 VNIGIISGRTLENLMKMVNI----EKVTYAGSHGLEILHPDGTKFVHP----VPKE-YAEKLRQLIKALQDEV--CHDGA 690 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~----~~~~li~~nG~~i~~~~~~~~~~~----~~~~-~~~~v~~i~~~~~~~~--~~~g~ 690 (808)
+.+.++-|.++..+.+.+|. .-++..+|||..-+..++..-.+. +..+ .++.+.-++.++.+-- ...|.
T Consensus 44 v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGt 123 (252)
T KOG3189|consen 44 VTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGT 123 (252)
T ss_pred eEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 78899999998888888862 224677999988765543321121 1111 1222222344444321 24689
Q ss_pred EEEecCcEEEEE--cCcCChh-------------hHHHHHHHHHHHHHhcCeeE-EccCeEEEEeCCCCCCHHHHHHHHH
Q psy2719 691 WIENKGVLLTFH--YRETPIE-------------RREYIIDRASQIFLEAGFEP-HNALMAIEAKPPVKWDQGRASIHIL 754 (808)
Q Consensus 691 ~ie~k~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~~~~v-~~g~~~vEv~p~~~v~KG~av~~ll 754 (808)
+||.++..+.+. -|++..+ +++.+.+++++.+..+++.. +.|.-++||-|. ||+|-..++++-
T Consensus 124 FiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~-GWDKtyCLqhle 202 (252)
T KOG3189|consen 124 FIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPK-GWDKTYCLQHLE 202 (252)
T ss_pred eEEecCCceeccccccccCHHHHHHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCC-CcchhHHHHHhh
Confidence 999988776654 2444321 12334556666666678876 567889999998 999999999987
Q ss_pred HHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCCCCccc
Q psy2719 755 RTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDSSPTVK 796 (808)
Q Consensus 755 ~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~~~~vk 796 (808)
+. |++ .|.+|| |.+.|..-+.+| ..|.++++..
T Consensus 203 ~d--gf~-----~IhFFGDkT~~GGNDyEIf~dprtiG--hsV~~PdDT~ 243 (252)
T KOG3189|consen 203 KD--GFD-----TIHFFGDKTMPGGNDYEIFADPRTIG--HSVTSPDDTV 243 (252)
T ss_pred hc--CCc-----eEEEeccccCCCCCcceeeeCCcccc--ccccCchHHH
Confidence 64 554 789999 788887776555 6677765433
No 133
>KOG1387|consensus
Probab=99.08 E-value=7.3e-09 Score=108.25 Aligned_cols=206 Identities=13% Similarity=0.172 Sum_probs=150.6
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCC--ccCcEEEEEEEcCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPE--YVEKVTFLQISVPSRT 358 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~--~~~~v~lv~ig~~~~~ 358 (808)
..++++.+-.+++.+.....+ +..+...+|++|.+.|.|++. .|+-++..+++.|. ...++.|+++| ..|+
T Consensus 244 ~~~~iVyPPC~~e~lks~~~t-----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRn 316 (465)
T KOG1387|consen 244 NTCSIVYPPCSTEDLKSKFGT-----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRN 316 (465)
T ss_pred cceeEEcCCCCHHHHHHHhcc-----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCC
Confidence 344444555666654433222 114567899999999999999 88888888888887 34568888777 4554
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
+. ++ +....++.++.+++..- . +.|.-.+|.+++..+|..|-+.|-+-..|-||+.+.||||++ .+
T Consensus 317 ee-D~-ervk~Lkd~a~~L~i~~------~-v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG-----lI 382 (465)
T KOG1387|consen 317 EE-DE-ERVKSLKDLAEELKIPK------H-VQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG-----LI 382 (465)
T ss_pred hh-hH-HHHHHHHHHHHhcCCcc------c-eEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC-----ce
Confidence 32 22 34456677777777541 2 445678999999999999999999999999999999999994 44
Q ss_pred EEcCCCCCc--cccC------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 439 ILSPFAGAG--GMMH------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 439 VlS~~~G~~--~~l~------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
.++..+|.. +++. .|++. | +.++-|++|.+++.++.++|......+|..+.+++-....++|...+.++
T Consensus 383 pi~h~SgGP~lDIV~~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 383 PIVHNSGGPLLDIVTPWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred EEEeCCCCCceeeeeccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 444444432 3331 48887 3 56789999999999999988877777888888888788888887766654
No 134
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.08 E-value=5.6e-08 Score=109.64 Aligned_cols=167 Identities=12% Similarity=0.142 Sum_probs=109.6
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
..++++.||+...||+..+++++ ++..|++ .++++++. +. ++++++++. .+.. ..+
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~----~~vvv~G~---~~----~l~~~l~~~---~~~~------~~v- 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANA----QVVMICGK---SK----ELKRSLTAK---FKSN------ENV- 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCc----eEEEEcCC---CH----HHHHHHHHH---hccC------CCe-
Confidence 34566799999999999999985 3444544 35555422 11 233333332 2111 134
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc------CceEEECCCCHHHH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM------HEALLVNPYEIDAA 464 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l------~~~llvnP~d~~~l 464 (808)
.+.|++ +++..+|++||+++.. +.|+++.|||||+. |+|++...+..+.. ..|.-+-+.|++++
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~G~----PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l 328 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLARCI----PMIFLNPAPGQELENALYFEEKGFGKIADTPEEA 328 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHhCC----CEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHH
Confidence 355765 5799999999999863 46899999999964 57777543322221 12333336699999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHccccc
Q psy2719 465 ANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDND 512 (808)
Q Consensus 465 A~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 512 (808)
+++|.++++. ++.+.++.+++++....+++..-++.+++.+....+.
T Consensus 329 ~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 329 IKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred HHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhh
Confidence 9999999975 4555556666777777888888888888777655443
No 135
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.08 E-value=8.3e-09 Score=114.14 Aligned_cols=179 Identities=15% Similarity=0.140 Sum_probs=113.1
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHH-HHHHHHHHhCCCccCcEEEE-EEEcCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRI-KAFERLLEKHPEYVEKVTFL-QISVPSR 357 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l-~A~~~ll~~~p~~~~~v~lv-~ig~~~~ 357 (808)
..++.++|+|+|.+.+.+... ........++++|+.+++....|+...++ +|++.+. + ++ +.++ ++|.
T Consensus 151 ~~~~~~i~n~v~~~~~~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G~--- 220 (350)
T cd03785 151 KDKAVVTGNPVREEILALDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL-R-KR----LQVIHQTGK--- 220 (350)
T ss_pred CCcEEEECCCCchHHhhhhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh-c-cC----eEEEEEcCC---
Confidence 457888999999887754321 00110014677888999888888887654 7777664 2 22 3333 3332
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
+ +.+++++. +.+. + ..++ +.+.+ +++..+|+.||++|.+| | +.+++|||+|+. |
T Consensus 221 --g-~~~~l~~~----~~~~----~----~~v~-~~g~~--~~~~~~l~~ad~~v~~s---g-~~t~~Eam~~G~----P 274 (350)
T cd03785 221 --G-DLEEVKKA----YEEL----G----VNYE-VFPFI--DDMAAAYAAADLVISRA---G-ASTVAELAALGL----P 274 (350)
T ss_pred --c-cHHHHHHH----Hhcc----C----CCeE-Eeehh--hhHHHHHHhcCEEEECC---C-HhHHHHHHHhCC----C
Confidence 1 22334333 3222 1 1233 45555 78999999999999877 3 588999999964 4
Q ss_pred EEEcCCCCC--------cccc---CceEEECCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCH
Q psy2719 438 LILSPFAGA--------GGMM---HEALLVNPY--EIDAAANVLHRALCMPRDERELRMSQLRHREQQLDV 495 (808)
Q Consensus 438 vVlS~~~G~--------~~~l---~~~llvnP~--d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~ 495 (808)
+|++...+. ++.+ ..|++|++. |+++++++|..+++ +++.++....++++++..+..
T Consensus 275 vv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~ 344 (350)
T cd03785 275 AILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAA 344 (350)
T ss_pred EEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHH
Confidence 676654331 2333 248999987 99999999999997 455555555556666554443
No 136
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.04 E-value=9.9e-10 Score=104.02 Aligned_cols=128 Identities=29% Similarity=0.424 Sum_probs=88.2
Q ss_pred CeEEEEEcCccccCChHHHHH-HHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIK-AFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPI 389 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~-A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v 389 (808)
..+|++.|++.+.||+..+++ |++++.+++|++ .|+++|... + +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G~~~-----~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIGNGP-----D------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEECESS------------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEeCCH-----H------HHHHh-cC----------CCE
Confidence 367999999999999999999 999999999875 477777522 1 12222 11 134
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHH
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAA 465 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA 465 (808)
. +.|.+ +++.++|+.||+++.|+. .++++..++|||++| .|+|+|.. |..+.+. .++++ +.|+++++
T Consensus 56 ~-~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 R-FHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp E-EE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred E-EcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 4 45777 689999999999999984 789999999999995 56888887 5555552 47777 88999999
Q ss_pred HHHHHHhC
Q psy2719 466 NVLHRALC 473 (808)
Q Consensus 466 ~ai~~~L~ 473 (808)
++|.++++
T Consensus 127 ~~i~~l~~ 134 (135)
T PF13692_consen 127 EAIERLLN 134 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999874
No 137
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.04 E-value=7.4e-09 Score=115.20 Aligned_cols=226 Identities=9% Similarity=0.039 Sum_probs=128.9
Q ss_pred CCEEEEeccchHHHHHHH-Hh-hcCCEEEec----c------HHHHHHHH-HHHHHHhC-ceeecCCeEEEEcCeEEEEE
Q psy2719 219 VPVVWIHDYQLLVAATTI-RQ-VAYDFVGFH----I------EDYCLNFI-DCCCRRLG-SRVDRNNMLVELAGRTVHVK 284 (808)
Q Consensus 219 ~dvvwihDyhl~llp~~l-r~-~~~dligf~----~------~~~~~~fl-~~~~~~l~-~~~~~~~~~i~~~gr~~~v~ 284 (808)
.|+|++|.+....++..+ .+ ..--++..+ + ....++.+ ..++.++. ++..++.+ +.++....+|.
T Consensus 89 pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l-~~~G~~~~kI~ 167 (363)
T cd03786 89 PDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAPTEEARRNL-LQEGEPPERIF 167 (363)
T ss_pred CCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCCCCCCchHHHHHHHHHhhhccCCCHHHHHHH-HHcCCCcccEE
Confidence 799999987655454332 22 222233221 1 22233322 23333332 22222221 23444567788
Q ss_pred EeecCc-CccccchhhcCchhhhhc----CCCeEEEEEcCccc---cCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 285 ALPIGI-PFERFVQLAENAPENLKD----ENLKVILGVDRLDY---TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 285 v~p~GI-D~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~---~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
++++++ |...+.+........++. .+..+++.++|+.. .||+..+++|++.+.++ + +.++..+.+
T Consensus 168 vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~~- 240 (363)
T cd03786 168 VVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNHP- 240 (363)
T ss_pred EECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECCC-
Confidence 888875 654433221111111111 34457778999875 79999999999987543 2 334433321
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
+ .++++++.+.+.+.. -..+ .+.+....+++..+|+.||++|.+|- | +..|||+|+.
T Consensus 241 ----~----~~~~l~~~~~~~~~~-----~~~v-~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~---- 297 (363)
T cd03786 241 ----R----TRPRIREAGLEFLGH-----HPNV-LLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV---- 297 (363)
T ss_pred ----C----hHHHHHHHHHhhccC-----CCCE-EEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC----
Confidence 1 123334444333210 0134 45566778899999999999999994 4 4799999964
Q ss_pred eEEEcCCCCCcccc-CceEEECCC-CHHHHHHHHHHHhCCC
Q psy2719 437 VLILSPFAGAGGMM-HEALLVNPY-EIDAAANVLHRALCMP 475 (808)
Q Consensus 437 ~vVlS~~~G~~~~l-~~~llvnP~-d~~~lA~ai~~~L~~~ 475 (808)
|+|++...+...++ .+|+.+.+. |+++++++|.++++.+
T Consensus 298 PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 298 PVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDE 338 (363)
T ss_pred CEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCc
Confidence 57777655544444 456555443 7999999999999864
No 138
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.81 E-value=1.3e-07 Score=109.55 Aligned_cols=166 Identities=9% Similarity=0.115 Sum_probs=119.5
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCC-C-
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPN-W- 386 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~-~- 386 (808)
..+.|.+++||| +.|.+..+|+|+.++.+++|++. |.+.|.++. . ++.+.+++++.++|..++... +
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~~---~---~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNND---N---DITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecCc---h---hHHHHHHHHHHHHHhhhchhhhcc
Confidence 345556666699 99999999999999999999864 665664321 1 234555666666655422100 0
Q ss_pred --------------------ccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCC
Q psy2719 387 --------------------SPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGA 446 (808)
Q Consensus 387 --------------------~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~ 446 (808)
...+.|.|..+..++.+.|..|.++|.+|..|||+ +.+|||+.|. |.| .-|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi----PqI---nyg~ 459 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI----PQI---NKVE 459 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC----Cee---ecCC
Confidence 02456778788889999999999999999999999 9999999843 344 5567
Q ss_pred ccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHH
Q psy2719 447 GGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVN 496 (808)
Q Consensus 447 ~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~ 496 (808)
++.+. +|++| .|..++++||...|..+ +...+......+.+.++|..
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L~~~-~~wn~~~~~sy~~~~~yS~~ 509 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYLDNL-KNWNYSLAYSIKLIDDYSSE 509 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhHH
Confidence 77774 69999 79999999999999854 34444445555655555543
No 139
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.81 E-value=3.1e-07 Score=102.99 Aligned_cols=133 Identities=16% Similarity=0.188 Sum_probs=87.1
Q ss_pred CCeEE-EEE-cCccccC-ChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy2719 310 NLKVI-LGV-DRLDYTK-GLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNW 386 (808)
Q Consensus 310 ~~~ii-l~V-~Rl~~~K-Gi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~ 386 (808)
++++| +.. +|....| +++.+++|++.+.+++|++ .+++++.+ .+ .++++++++.+.. | .
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~~----~~----~~~~~~~~~~~~~---~---~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLVN----PK----RREQIEEALAEYA---G---L 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecCC----hh----hHHHHHHHHhhcC---C---C
Confidence 44543 333 4666654 4789999999998888865 35655421 11 2233444433320 1 1
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEc-----------------CCCCCccc
Q psy2719 387 SPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILS-----------------PFAGAGGM 449 (808)
Q Consensus 387 ~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS-----------------~~~G~~~~ 449 (808)
.+.++. .++..+|+.||+++.+| |.+.+|+|+|++ |+|++ .+.|..+.
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~----PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV----PMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC----CEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 233332 47899999999999998 788899999964 56666 33344444
Q ss_pred cC-----ceEEECCCCHHHHHHHHHHHhCCC
Q psy2719 450 MH-----EALLVNPYEIDAAANVLHRALCMP 475 (808)
Q Consensus 450 l~-----~~llvnP~d~~~lA~ai~~~L~~~ 475 (808)
+. .+++.+..|+++++++|.++|+.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 43 246778889999999999999853
No 140
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.79 E-value=5.1e-08 Score=99.50 Aligned_cols=112 Identities=26% Similarity=0.378 Sum_probs=81.0
Q ss_pred EEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcC
Q psy2719 315 LGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFG 394 (808)
Q Consensus 315 l~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~ 394 (808)
.++||+.+.||++.+++|+..+.++.|++ .++++|... +... .+ .++... +. ...|.+ .+
T Consensus 108 ~~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~~--~~~~---~~----~~~~~~----~~--~~~v~~-~~ 167 (229)
T cd01635 108 VFVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDGP--EREY---LE----ELLAAL----LL--LDRVIF-LG 167 (229)
T ss_pred EEEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCCC--ChHH---HH----HHHHhc----CC--cccEEE-eC
Confidence 39999999999999999999998887765 588777532 1111 11 111111 11 124544 45
Q ss_pred CC-CHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc
Q psy2719 395 CI-GQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM 450 (808)
Q Consensus 395 ~v-~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l 450 (808)
.+ +.+++..+++.||+++.||..||||++++|||+|+ .|+|+|+..+..+.+
T Consensus 168 ~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i 220 (229)
T cd01635 168 GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIV 220 (229)
T ss_pred CCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEE
Confidence 55 55666777777999999999999999999999995 569999988877655
No 141
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.75 E-value=5.2e-08 Score=97.71 Aligned_cols=175 Identities=19% Similarity=0.330 Sum_probs=107.8
Q ss_pred HHHHHHHhCCCCCeEEEEeCCChhhHHHhc-Cc----cceEEEcccceeEecCCCceeecCCC----hh-HHHHHHHHHH
Q psy2719 610 KRVLERLANMPDVNIGIISGRTLENLMKMV-NI----EKVTYAGSHGLEILHPDGTKFVHPVP----KE-YAEKLRQLIK 679 (808)
Q Consensus 610 ~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~-~~----~~~~li~~nG~~i~~~~~~~~~~~~~----~~-~~~~v~~i~~ 679 (808)
++.|++|.. .+.|+|+||.++..+.+.+ +. ...++.++||...+..++..+.+.+. .+ .++.+.-++.
T Consensus 2 ~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 345556655 7999999999999988877 32 12478899999998776555544332 11 1222333333
Q ss_pred HHHhhc--cCCCcEEEecCcEEEEEc--CcCChhhH-------------HHHHHHHHHHHHhcCeeE-EccCeEEEEeCC
Q psy2719 680 ALQDEV--CHDGAWIENKGVLLTFHY--RETPIERR-------------EYIIDRASQIFLEAGFEP-HNALMAIEAKPP 741 (808)
Q Consensus 680 ~~~~~~--~~~g~~ie~k~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~v-~~g~~~vEv~p~ 741 (808)
+..+.- ...|.+||.+...+.+.- |+++.+.. +.+.+.+++.+..+++++ +-|..++||.|+
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~ 159 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPK 159 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEET
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccC
Confidence 333321 246899999999998864 44543211 112233333333446777 467899999998
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCCCCccc
Q psy2719 742 VKWDQGRASIHILRTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDSSPTVK 796 (808)
Q Consensus 742 ~~v~KG~av~~ll~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~~~~vk 796 (808)
|++|..++++|.+. +++ ++++|| |.+.|...+.+| ++|.++++.+
T Consensus 160 -GwDKty~Lr~l~~~--~~~-----~I~FfGDkt~pGGNDyei~~~~rt~g--~~V~~p~DT~ 212 (220)
T PF03332_consen 160 -GWDKTYCLRHLEDE--GFD-----EIHFFGDKTFPGGNDYEIFEDPRTIG--HTVTSPEDTI 212 (220)
T ss_dssp -T-SGGGGGGGTTTT--T-S-----EEEEEESS-STTSTTHHHHHSTTSEE--EE-SSHHHHH
T ss_pred -CccHHHHHHHHHhc--ccc-----eEEEEehhccCCCCCceeeecCCccE--EEeCCHHHHH
Confidence 99999999998663 222 799999 999999876444 8898865433
No 142
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.45 E-value=9.7e-06 Score=89.44 Aligned_cols=91 Identities=13% Similarity=0.131 Sum_probs=65.0
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCC-----------CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEE
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPL-----------RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALL 455 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~-----------~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~ll 455 (808)
+.+.|.++.++++.+|+. |+.+++.- .-.++--..|||||| .|+|++..++.++.+. .|++
T Consensus 209 V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~ 283 (333)
T PRK09814 209 ISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFV 283 (333)
T ss_pred eEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEE
Confidence 345799999999999998 65555331 123445588999996 5699999888888874 4999
Q ss_pred ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q psy2719 456 VNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE 490 (808)
Q Consensus 456 vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v 490 (808)
|+ +.++++++|..+ ++++++++.++.++..
T Consensus 284 v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~ 313 (333)
T PRK09814 284 VD--SLEELPEIIDNI---TEEEYQEMVENVKKIS 313 (333)
T ss_pred eC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 97 678999999874 3555555444444443
No 143
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.36 E-value=1.5e-05 Score=90.90 Aligned_cols=114 Identities=11% Similarity=0.157 Sum_probs=68.5
Q ss_pred cEEEEcCCCCHH------HHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----C----ce
Q psy2719 388 PIRYIFGCIGQE------ELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----H----EA 453 (808)
Q Consensus 388 ~v~~~~~~v~~~------el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~----~~ 453 (808)
.|+|...+++.. ++..+.+.+|+.|+||.||++|.+++|+.|.+ .|.|.|+.+|....+ . .|
T Consensus 444 KVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~g----VPsITTnLsGFG~~~~~~~~~~~~~G 519 (633)
T PF05693_consen 444 KVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFG----VPSITTNLSGFGCWMQEHIEDPEEYG 519 (633)
T ss_dssp EEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT------EEEETTBHHHHHHHTTS-HHGGGT
T ss_pred EEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcC----CceeeccchhHHHHHHHhhccCcCCc
Confidence 455554444332 47788999999999999999999999999995 579999999975333 1 35
Q ss_pred EE-ECCC--C----HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 454 LL-VNPY--E----IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 454 ll-vnP~--d----~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
+. |+=. + ++++|+.|.+...++.++|.....+..+....-+|..-...|.+.
T Consensus 520 V~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 520 VYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp EEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 54 4332 3 356777778888888777666555444444455666655555443
No 144
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.30 E-value=1.7e-06 Score=84.41 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=53.7
Q ss_pred EEEEecccccccCCCC------CCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhC
Q psy2719 545 SLILDYDGTLTPLTSH------PDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLAN 618 (808)
Q Consensus 545 li~~D~DGTLl~~~~~------~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~ 618 (808)
++++|+||||+..... .....+++.+.+++++++++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~-------------------------------------- 42 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN-------------------------------------- 42 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc--------------------------------------
Confidence 4899999999984210 00147889999999999987
Q ss_pred CCCCeEEEEeCCChhhHH---HhcC--------ccceEEEcccceeEec
Q psy2719 619 MPDVNIGIISGRTLENLM---KMVN--------IEKVTYAGSHGLEILH 656 (808)
Q Consensus 619 ~pg~~v~I~SGR~~~~l~---~~~~--------~~~~~li~~nG~~i~~ 656 (808)
|+.|+++|||+..... +++. .+..++++.||+.+..
T Consensus 43 --G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~ 89 (157)
T smart00775 43 --GYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAA 89 (157)
T ss_pred --CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhh
Confidence 9999999999977653 4442 3334788999998864
No 145
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.29 E-value=4e-06 Score=74.00 Aligned_cols=87 Identities=22% Similarity=0.231 Sum_probs=70.2
Q ss_pred eEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy2719 410 IALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQL 486 (808)
Q Consensus 410 v~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~ 486 (808)
|++.|+..+|+++..+|+|||| +|+|.+...+..+.+. +++.++ |+++++++|..+++. ++++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~-~~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLEN-PEERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCC-HHHHHHHHHHH
Confidence 4677888999999999999994 5666666667777774 377777 999999999999984 56777777778
Q ss_pred hHHHh-cCCHHHHHHHHH
Q psy2719 487 RHREQ-QLDVNHWMNSFL 503 (808)
Q Consensus 487 ~~~v~-~~~~~~W~~~~l 503 (808)
++++. .||+.+-++.|+
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 88886 788888887776
No 146
>KOG1050|consensus
Probab=98.27 E-value=2.2e-07 Score=109.80 Aligned_cols=89 Identities=30% Similarity=0.652 Sum_probs=68.8
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||+++|++..++.+-.||||.|...+. ... .......+..+++.|++++++...+||+||||++|||+||
T Consensus 31 ~~~l~~~l~~~~~~~~~~~vg~~~~~~~~-------~~~-~~~~~~~~~~~~~~pv~~~~~~~~~~y~~~~~~ilwP~~h 102 (732)
T KOG1050|consen 31 PGSLVSQLKGIFREMEVKWVGPLGDELDD-------SEK-EDVSQELLEEFDSVPVFLDDELFDSYYNGYCKSILWPLFH 102 (732)
T ss_pred CCCchhhhhcccccceeeEEeeccccCch-------hhH-hHhhhhhhhhcCceeeecCCchhhhhhhhhhhhcccceee
Confidence 58999999999999999999998844321 111 1112234567899999999999999999999999999999
Q ss_pred cC--cccc---ccCcccchhhh
Q psy2719 81 SM--PDRA---VFNAETWKVSH 97 (808)
Q Consensus 81 ~~--~~~~---~~~~~~w~~y~ 97 (808)
|+ |... +|+.+.|..|+
T Consensus 103 y~~~p~~~~~~~~~~~~w~~y~ 124 (732)
T KOG1050|consen 103 YMLIPSEPAFKLFDLELWKAYV 124 (732)
T ss_pred cccCCCchhhhhhHHHHHHHHH
Confidence 99 3322 45578899886
No 147
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=98.24 E-value=7e-05 Score=88.20 Aligned_cols=148 Identities=17% Similarity=0.136 Sum_probs=107.2
Q ss_pred CCeEEEEEcCccccCChHHHHHHHHHHHH--hCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy2719 310 NLKVILGVDRLDYTKGLVHRIKAFERLLE--KHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWS 387 (808)
Q Consensus 310 ~~~iil~V~Rl~~~KGi~~~l~A~~~ll~--~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~ 387 (808)
+.++|.+|.|+...||++.++.+++++++ ++|+. .+.+|+.|.+...+... .++.+.+.+++..- .|. .
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~g-k~~i~~i~~la~~~--~~~----~ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGEG-KEIIQRIVEFSKRP--EFR----G 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccchH-HHHHHHHHHHHhcc--cCC----C
Confidence 45689999999999999999999999985 55552 47788888665443221 23445555554320 021 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCeEEE-CCC-CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---CceEEECC----
Q psy2719 388 PIRYIFGCIGQEELAALYRDSAIALV-TPL-RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---HEALLVNP---- 458 (808)
Q Consensus 388 ~v~~~~~~v~~~el~aly~~Adv~v~-~S~-~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---~~~llvnP---- 458 (808)
.|+++.++ +..--..++++||+++. ||. +|.-|+.-+=||.- |.+-.|-.-|...+. .+|+.+.+
T Consensus 459 kv~f~~~Y-d~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLENY-DINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEcCC-CHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 46666543 44444568999999999 888 99999999999885 667778777876665 36999985
Q ss_pred --------CCHHHHHHHHHHHh
Q psy2719 459 --------YEIDAAANVLHRAL 472 (808)
Q Consensus 459 --------~d~~~lA~ai~~~L 472 (808)
.|.+++-++|.+++
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai 554 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEV 554 (601)
T ss_pred cccccccCCCHHHHHHHHHHHH
Confidence 89999999998877
No 148
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.23 E-value=5.1e-07 Score=98.37 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
+-.|+.+++.++++ +|++.+ ++++|| |++|++.+| . +|||.+.+.||+.|++++.++
T Consensus 246 ~k~K~~~L~~la~~-lgi~~~---qtIaVGDg~NDl~m~~~AG-l--giA~nAkp~Vk~~Ad~~i~~~ 306 (322)
T PRK11133 246 AQYKADTLTRLAQE-YEIPLA---QTVAIGDGANDLPMIKAAG-L--GIAYHAKPKVNEQAQVTIRHA 306 (322)
T ss_pred cccHHHHHHHHHHH-cCCChh---hEEEEECCHHHHHHHHHCC-C--eEEeCCCHHHHhhCCEEecCc
Confidence 35899999999987 899875 799999 999999995 4 488865799999999999763
No 149
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.23 E-value=0.00014 Score=82.01 Aligned_cols=135 Identities=15% Similarity=0.072 Sum_probs=82.5
Q ss_pred CCCeEEEE--EcCccc-cCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCC
Q psy2719 309 ENLKVILG--VDRLDY-TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPN 385 (808)
Q Consensus 309 ~~~~iil~--V~Rl~~-~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~ 385 (808)
.++++|+. .+|..+ .|+++.+++|++.+.+++|+++ +++.+.+. .. ++.++++....+. +
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~----~~~~~~~~~~~~~-----~ 251 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KR----RLQFEQIKAEYGP-----D 251 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hh----HHHHHHHHHHhCC-----C
Confidence 35565544 459887 7999999999999998888763 44333221 11 1222333322221 1
Q ss_pred CccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC-----------------CCCCcc
Q psy2719 386 WSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP-----------------FAGAGG 448 (808)
Q Consensus 386 ~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~-----------------~~G~~~ 448 (808)
..+..+.+ +...+|++||++|.+| |.+.+|+|+|++| +|++- +.+.+.
T Consensus 252 -~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P----~Vv~yk~~pl~~~~~~~~~~~~~~~~~n 316 (385)
T TIGR00215 252 -LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKTP----MVVGYRMKPLTFLIARRLVKTDYISLPN 316 (385)
T ss_pred -CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCC----EEEEEcCCHHHHHHHHHHHcCCeeeccH
Confidence 13444432 3457999999999999 7788899999764 55541 122222
Q ss_pred ccCc-e----EEECCCCHHHHHHHHHHHhCCC
Q psy2719 449 MMHE-A----LLVNPYEIDAAANVLHRALCMP 475 (808)
Q Consensus 449 ~l~~-~----llvnP~d~~~lA~ai~~~L~~~ 475 (808)
.+.+ + ++-+-.+++.+++++.++|+.+
T Consensus 317 il~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 317 ILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2211 1 2223346889999999999865
No 150
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.17 E-value=4.7e-06 Score=81.21 Aligned_cols=56 Identities=14% Similarity=0.085 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcCC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHTM 807 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~~ 807 (808)
+|..+++.++++ +|++++ .++++| |++|++.++ ++++|.+ .+.++..|+|++.++.
T Consensus 76 ~k~~~~~~~~~~-~~~~~~---~~~~vGDs~~D~~~~~~ag---~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 76 NKLIAFSDILEK-LALAPE---NVAYIGDDLIDWPVMEKVG---LSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred chHHHHHHHHHH-cCCCHH---HEEEECCCHHHHHHHHHCC---CeEecCCcCHHHHHhCCEEecCCC
Confidence 588899999987 888865 799999 999999995 4599986 5789999999998763
No 151
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.14 E-value=5.3e-05 Score=86.03 Aligned_cols=122 Identities=12% Similarity=0.240 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHH
Q psy2719 327 VHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYR 406 (808)
Q Consensus 327 ~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~ 406 (808)
...|+|++.+.++.|++. |=+ |.++ + +..+|.++ .+ | ..++.+.+.. ..++..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~~~-~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPNIT-TQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECCcC-hHHHHHHHH
Confidence 899999999999999975 443 4333 1 22344444 22 2 2566666554 467889999
Q ss_pred hcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCC-CCccccCceEEECCCCHHHHHHHHHHHhCCCH
Q psy2719 407 DSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFA-GAGGMMHEALLVNPYEIDAAANVLHRALCMPR 476 (808)
Q Consensus 407 ~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~-G~~~~l~~~llvnP~d~~~lA~ai~~~L~~~~ 476 (808)
.||+++.+|..|||++++.||+..+. |++.=+.+ |-.+.+.+|.++++.|+++|+++|.++|+.+.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G~----pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYNL----LILGFEETAHNRDFIASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcCC----cEEEEecccCCcccccCCceecCCCHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999843 34443333 44555567999999999999999999998653
No 152
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.02 E-value=7.7e-06 Score=82.13 Aligned_cols=54 Identities=13% Similarity=0.114 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
+|..+++.++++ +|++++ +++++| |++|++.++ ++++|++ .+.++..|+|++..
T Consensus 96 ~k~~~l~~~~~~-~gl~~~---ev~~VGDs~~D~~~a~~aG---~~~~v~~~~~~~~~~a~~v~~~ 154 (183)
T PRK09484 96 NKLIAFSDLLEK-LAIAPE---QVAYIGDDLIDWPVMEKVG---LSVAVADAHPLLLPRADYVTRI 154 (183)
T ss_pred cHHHHHHHHHHH-hCCCHH---HEEEECCCHHHHHHHHHCC---CeEecCChhHHHHHhCCEEecC
Confidence 577899999997 898865 799999 999999984 4477876 46668889998864
No 153
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.96 E-value=1.9e-05 Score=77.98 Aligned_cols=55 Identities=13% Similarity=0.165 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.|-..++.++++ ++++++ ++++|| |++|++.++ ++++|+| .+.+|+.|+|++.++
T Consensus 82 pkp~~~~~~~~~-l~~~~~---ev~~iGD~~nDi~~~~~ag---~~~am~nA~~~lk~~A~~I~~~~ 141 (169)
T TIGR02726 82 KKTEPYAQMLEE-MNISDA---EVCYVGDDLVDLSMMKRVG---LAVAVGDAVADVKEAAAYVTTAR 141 (169)
T ss_pred CCHHHHHHHHHH-cCcCHH---HEEEECCCHHHHHHHHHCC---CeEECcCchHHHHHhCCEEcCCC
Confidence 355688888886 788764 799999 999999984 5699997 589999999998743
No 154
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.85 E-value=2.6e-05 Score=72.74 Aligned_cols=37 Identities=16% Similarity=0.127 Sum_probs=27.2
Q ss_pred eEEEEecccccccCCCCC-CccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSHP-DLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~-~~~~i~~~~~~~L~~L~~~ 580 (808)
++|++|+||||+.....+ ....+.++++++|+++.++
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~ 39 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL 39 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC
Confidence 479999999998743211 1235778999999998877
No 155
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.82 E-value=6.7e-05 Score=70.07 Aligned_cols=56 Identities=14% Similarity=0.341 Sum_probs=42.5
Q ss_pred EEEEecccccccCCCCC---CccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 545 SLILDYDGTLTPLTSHP---DLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~---~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
+++||+||||.+..... ....+.+.+.+.|++|+++ |
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----------------------------------------g 40 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----------------------------------------G 40 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----------------------------------------C
Confidence 47999999999854310 1125677888888888876 8
Q ss_pred CeEEEEeCCChhhHHHhcC
Q psy2719 622 VNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~ 640 (808)
+.++|+||+....+..++.
T Consensus 41 ~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 41 IKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEEEeCchHHHHHHHHH
Confidence 9999999998877777664
No 156
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=97.67 E-value=0.0017 Score=78.29 Aligned_cols=132 Identities=20% Similarity=0.141 Sum_probs=93.6
Q ss_pred eEEEEEcCccccCChHHHHHHHHHHHH--hCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy2719 312 KVILGVDRLDYTKGLVHRIKAFERLLE--KHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPI 389 (808)
Q Consensus 312 ~iil~V~Rl~~~KGi~~~l~A~~~ll~--~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v 389 (808)
.+|.++.|+...||...+++.++++.+ .+|+ ..+.+|+.|.+...+... +++.+.+.++...- +|. ..|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~g-K~iIk~i~~~a~~p--~~~----~kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEPG-KELIQEIVEFSRRP--EFR----GRI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchHH-HHHHHHHHHHHhCc--CCC----CcE
Confidence 479999999999999999999998865 3444 257788888655443221 23444444444310 221 146
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---CceEEECC
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---HEALLVNP 458 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---~~~llvnP 458 (808)
+|+.++ +-.--..+++.|||++.||. +|.=|+.-+=||.- |++-+|..-|...+. .+|..+.+
T Consensus 550 vfle~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~ 617 (778)
T cd04299 550 VFLEDY-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGD 617 (778)
T ss_pred EEEcCC-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCC
Confidence 666543 44444568999999999999 99999999888874 788889988887666 25999988
No 157
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.66 E-value=8.9e-05 Score=78.24 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=52.4
Q ss_pred ceEEEEecccccccCCCCCCccCC-CHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVM-SEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i-~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
.++|+||+||||++... ..+| +|.+.++|++|+++ |
T Consensus 126 ~kvIvFDLDgTLi~~~~---~v~irdPgV~EaL~~Lkek----------------------------------------G 162 (301)
T TIGR01684 126 PHVVVFDLDSTLITDEE---PVRIRDPRIYDSLTELKKR----------------------------------------G 162 (301)
T ss_pred ceEEEEecCCCCcCCCC---ccccCCHHHHHHHHHHHHC----------------------------------------C
Confidence 46999999999999422 1224 59999999999998 9
Q ss_pred CeEEEEeCCChhhHHHhc---Cccc-eEEEcccceeEec
Q psy2719 622 VNIGIISGRTLENLMKMV---NIEK-VTYAGSHGLEILH 656 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~---~~~~-~~li~~nG~~i~~ 656 (808)
+.++|+|+++...+...+ |+.. ...|..+|.....
T Consensus 163 ikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~ 201 (301)
T TIGR01684 163 CILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEE 201 (301)
T ss_pred CEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccC
Confidence 999999988887765554 4433 2356667776543
No 158
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.27 E-value=0.00084 Score=68.96 Aligned_cols=55 Identities=11% Similarity=0.125 Sum_probs=45.6
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSN 804 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~ 804 (808)
+-+|..+++.+++. +|++++ +++|+| |.+||+.++ .+ +++...+.+++.|+....
T Consensus 142 ~~~K~~~l~~~~~~-~g~~~~---~~~a~gDs~nDlpml~~ag-~~--ia~n~~~~l~~~a~~~~~ 200 (212)
T COG0560 142 GEGKAKALRELAAE-LGIPLE---ETVAYGDSANDLPMLEAAG-LP--IAVNPKPKLRALADVRIW 200 (212)
T ss_pred cchHHHHHHHHHHH-cCCCHH---HeEEEcCchhhHHHHHhCC-CC--eEeCcCHHHHHHHHHhcC
Confidence 46899999999986 899875 799999 999999995 44 888877778888876543
No 159
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.23 E-value=0.00052 Score=72.59 Aligned_cols=68 Identities=15% Similarity=0.105 Sum_probs=48.9
Q ss_pred ceEEEEecccccccCCCCCCccCC---CHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVM---SEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANM 619 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i---~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~ 619 (808)
.++|+||+||||++.. ..+ +|.+.++|.+|++.
T Consensus 128 ~~~i~~D~D~TL~~~~-----~~v~irdp~V~EtL~eLkek--------------------------------------- 163 (303)
T PHA03398 128 PHVIVFDLDSTLITDE-----EPVRIRDPFVYDSLDELKER--------------------------------------- 163 (303)
T ss_pred ccEEEEecCCCccCCC-----CccccCChhHHHHHHHHHHC---------------------------------------
Confidence 4699999999999942 344 68999999999988
Q ss_pred CCCeEEEEeCCChhhHHHhc---Cccc-eEEEcccceeEe
Q psy2719 620 PDVNIGIISGRTLENLMKMV---NIEK-VTYAGSHGLEIL 655 (808)
Q Consensus 620 pg~~v~I~SGR~~~~l~~~~---~~~~-~~li~~nG~~i~ 655 (808)
|+.++|+|+.+...+...+ ++.. ...+..+|....
T Consensus 164 -GikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 164 -GCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred -CCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 8999999977666555544 4432 224555665543
No 160
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.84 E-value=0.2 Score=55.68 Aligned_cols=159 Identities=19% Similarity=0.112 Sum_probs=99.3
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCC----
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNW---- 386 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~---- 386 (808)
+++++..+. ...--...++++..+++++|+. ++++. | ..|| --..+++++.+.+-+++.-..
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~-----llIlV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~ 296 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNL-----LLILV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPP 296 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCc-----eEEEe-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCC
Confidence 888888888 3333344789999999999986 33333 3 1232 245667777777766532211
Q ss_pred ---ccEEEEcCCCCHHHHHHHHHhcCeEEECC-CCCCCChhHHHHHHhccCCCceEEEcCCC----CCccccC---ceEE
Q psy2719 387 ---SPIRYIFGCIGQEELAALYRDSAIALVTP-LRDGMNLVAKEYVACQIREPGVLILSPFA----GAGGMMH---EALL 455 (808)
Q Consensus 387 ---~~v~~~~~~v~~~el~aly~~Adv~v~~S-~~EG~gLv~~Eama~~~~~~g~vVlS~~~----G~~~~l~---~~ll 455 (808)
++|... . +.-|+..+|+.||++.+-- +-+==|=-++|+.+++ .|+|...+. -+++.+. +++.
T Consensus 297 ~~~tdV~l~--D-tmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~----~pvi~Gp~~~Nf~ei~~~l~~~ga~~~ 369 (419)
T COG1519 297 FSDTDVLLG--D-TMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFG----TPVIFGPYTFNFSDIAERLLQAGAGLQ 369 (419)
T ss_pred CCCCcEEEE--e-cHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcC----CCEEeCCccccHHHHHHHHHhcCCeEE
Confidence 233322 1 5579999999999977654 3321233479999995 456654433 2333332 3677
Q ss_pred ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC
Q psy2719 456 VNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQL 493 (808)
Q Consensus 456 vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~ 493 (808)
|+. .+.+++++..+++. +++|.++.++....+..+
T Consensus 370 v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 370 VED--ADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred ECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 764 77888888887764 666666666666666544
No 161
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.75 E-value=0.0014 Score=69.15 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=25.1
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
++|+||+||||++. ...++ .+.++|++|+++
T Consensus 2 ~~~~~D~DGtl~~~-----~~~i~-~a~~~l~~l~~~ 32 (249)
T TIGR01457 2 KGYLIDLDGTMYKG-----KERIP-EAETFVHELQKR 32 (249)
T ss_pred CEEEEeCCCceEcC-----CeeCc-CHHHHHHHHHHC
Confidence 47999999999983 23444 789999999987
No 162
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.47 E-value=0.005 Score=57.97 Aligned_cols=37 Identities=22% Similarity=0.210 Sum_probs=24.9
Q ss_pred eEEEEecccccccCCC--CCCcc-----CCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTS--HPDLA-----VMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~--~~~~~-----~i~~~~~~~L~~L~~~ 580 (808)
|+|++|+||||++... ..... .+.+.+.+.|+.|+++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~ 44 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN 44 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC
Confidence 5899999999998521 00000 2456788888888776
No 163
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.42 E-value=0.0033 Score=66.69 Aligned_cols=46 Identities=20% Similarity=0.330 Sum_probs=31.0
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
++|+||+||||++.... ...+.+.+.++|++|+++ +..++++|||+
T Consensus 2 k~i~~D~DGtl~~~~~~--~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~ 47 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK--SGVAVPGSQEAVKRLRGA-SVKVRFVTNTT 47 (257)
T ss_pred CEEEEeCCCeEEeCCCc--ccCcCCCHHHHHHHHHHC-CCeEEEEECCC
Confidence 57999999999973210 012677999999999987 33334444333
No 164
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.37 E-value=0.0038 Score=58.83 Aligned_cols=37 Identities=30% Similarity=0.371 Sum_probs=26.3
Q ss_pred eEEEEecccccccCCCC---CCccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSH---PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~---~~~~~i~~~~~~~L~~L~~~ 580 (808)
|+++||+||||++.... -....+.+.+.++|++|++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~ 40 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA 40 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC
Confidence 57999999999952111 01235678888899999877
No 165
>PRK10444 UMP phosphatase; Provisional
Probab=96.12 E-value=0.006 Score=64.30 Aligned_cols=42 Identities=19% Similarity=0.282 Sum_probs=31.3
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
++++||+||||+.. ..+.+.+.++|++|++. +..+.++|+|+
T Consensus 2 ~~v~~DlDGtL~~~------~~~~p~a~~~l~~L~~~-g~~~~~~Tn~~ 43 (248)
T PRK10444 2 KNVICDIDGVLMHD------NVAVPGAAEFLHRILDK-GLPLVLLTNYP 43 (248)
T ss_pred cEEEEeCCCceEeC------CeeCccHHHHHHHHHHC-CCeEEEEeCCC
Confidence 47999999999983 25678899999999987 34444444444
No 166
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.07 E-value=0.015 Score=57.34 Aligned_cols=38 Identities=24% Similarity=0.177 Sum_probs=25.9
Q ss_pred ceEEEEecccccccCCCC------CCccC-CCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSH------PDLAV-MSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~------~~~~~-i~~~~~~~L~~L~~~ 580 (808)
.++++||+||||+...+. |++-+ +-+.+.++|++|.++
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~ 57 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE 57 (166)
T ss_pred CcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC
Confidence 468999999999974321 11111 337788899999887
No 167
>PLN02645 phosphoglycolate phosphatase
Probab=96.04 E-value=0.0087 Score=65.37 Aligned_cols=52 Identities=17% Similarity=0.308 Sum_probs=34.7
Q ss_pred hhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 528 DDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 528 ~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
..+..++..| ++|+||+||||+... .+.+.+.++|++|+++ +..++++|+|+
T Consensus 19 ~~~~~~~~~~------~~~~~D~DGtl~~~~------~~~~ga~e~l~~lr~~-g~~~~~~TN~~ 70 (311)
T PLN02645 19 ENADELIDSV------ETFIFDCDGVIWKGD------KLIEGVPETLDMLRSM-GKKLVFVTNNS 70 (311)
T ss_pred HHHHHHHHhC------CEEEEeCcCCeEeCC------ccCcCHHHHHHHHHHC-CCEEEEEeCCC
Confidence 3445555543 589999999999832 3457789999999887 33344444444
No 168
>KOG2941|consensus
Probab=95.88 E-value=0.17 Score=54.22 Aligned_cols=169 Identities=12% Similarity=0.137 Sum_probs=105.7
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHh----CCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEK----HPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~----~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
....++++--.+.|...+--+++|+..+-++ .-++ .++..++.| .+|..+.+.++|+ +.
T Consensus 253 ~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~l-P~llciITG-----KGPlkE~Y~~~I~----~~------- 315 (444)
T KOG2941|consen 253 ERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNL-PSLLCIITG-----KGPLKEKYSQEIH----EK------- 315 (444)
T ss_pred CCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCC-CcEEEEEcC-----CCchhHHHHHHHH----Hh-------
Confidence 3456888888999999999999999854221 1111 133333332 3444444444444 33
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCe--EEECCCCCCCChh--HHHHHHhccCCCceEEEcCCCCCcccc----CceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAI--ALVTPLRDGMNLV--AKEYVACQIREPGVLILSPFAGAGGMM----HEALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv--~v~~S~~EG~gLv--~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llv 456 (808)
+|+.|.+.+-.+.-++++.++..||. ++-||. -|.-|+ +..-.-|+ -|+++-+|. |.++| .+|+++
T Consensus 316 ~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcg----lPvcA~~fk-cl~ELVkh~eNGlvF 389 (444)
T KOG2941|consen 316 NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCG----LPVCAVNFK-CLDELVKHGENGLVF 389 (444)
T ss_pred cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCC----Cceeeecch-hHHHHHhcCCCceEe
Confidence 36678888889999999999999995 455554 565554 44555563 345555665 55555 269998
Q ss_pred CCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 457 NPYEIDAAANVLHRALCM---PRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 457 nP~d~~~lA~ai~~~L~~---~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
+ |.+++|+.|..+++. +..+.... ++.+.+..-.+|.+++-+..
T Consensus 390 ~--Ds~eLa~ql~~lf~~fp~~a~~l~~l----kkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 390 E--DSEELAEQLQMLFKNFPDNADELNQL----KKNLREEQELRWDESWERTA 436 (444)
T ss_pred c--cHHHHHHHHHHHHhcCCCCHHHHHHH----HHhhHHHHhhhHHHHHHHhh
Confidence 6 889999999999873 22333322 22233334467776665443
No 169
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.81 E-value=0.01 Score=63.76 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=30.4
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
++|+||+||||.+. . ...+.+.++|++|+++ +..++++|||+
T Consensus 3 ~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~L~~~-g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLG-----E-RVVPGAPELLDRLARA-GKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcC-----C-eeCcCHHHHHHHHHHC-CCeEEEEeCCC
Confidence 57999999999883 2 2344589999999876 44555666654
No 170
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=95.78 E-value=0.24 Score=56.49 Aligned_cols=171 Identities=13% Similarity=0.133 Sum_probs=89.7
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
.+..++.+..++ .|=-+..++.+.++|+..|+.+ |++...+. .. ++.+.+...+. |- +-..
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~------~~~l~~~~~~~----Gv-~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SG------EARLRRRFAAH----GV-DPDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--TH------HHHHHHHHHHT----TS--GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HH------HHHHHHHHHHc----CC-Chhh
Confidence 566677777876 5667899999999999999863 65555443 11 12333333332 22 1235
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCc------cccC----ceEEECC
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAG------GMMH----EALLVNP 458 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~------~~l~----~~llvnP 458 (808)
++| .+..+.++..+.|+.+||++-|..+-| +.+.+||+.+| ++|+|--+-.. ..+. .-++ -
T Consensus 344 i~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmG-----VPvVTl~G~~~~sR~~aSiL~~lGl~ElI--A 414 (468)
T PF13844_consen 344 IIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMG-----VPVVTLPGETMASRVGASILRALGLPELI--A 414 (468)
T ss_dssp EEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT-------EEB---SSGGGSHHHHHHHHHT-GGGB---
T ss_pred EEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcC-----CCEEeccCCCchhHHHHHHHHHcCCchhc--C
Confidence 654 557788899999999999999987766 67889999994 55555432211 1111 1122 2
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh---cCCHHHHHHHHHHHHHc
Q psy2719 459 YEIDAAANVLHRALCMPRDERELRMSQLRHREQ---QLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 459 ~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~---~~~~~~W~~~~l~~l~~ 508 (808)
.|.++..+.-.++-+. .+.++...+++++... -++...|++++...+++
T Consensus 415 ~s~~eYv~~Av~La~D-~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 415 DSEEEYVEIAVRLATD-PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp SSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 3555555544444443 3334333334444442 24777788777766654
No 171
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.56 E-value=0.0044 Score=58.88 Aligned_cols=55 Identities=18% Similarity=0.216 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
-+|-.+.+.|+++ ++++++ ++.++| |.++|+.+ |++|++.+ .+++++.|+|||..
T Consensus 82 ~dK~~a~~~L~~~-~~l~~e---~~ayiGDD~~Dlpvm~~v---Gls~a~~dAh~~v~~~a~~Vt~~ 141 (170)
T COG1778 82 SDKLAAFEELLKK-LNLDPE---EVAYVGDDLVDLPVMEKV---GLSVAVADAHPLLKQRADYVTSK 141 (170)
T ss_pred HhHHHHHHHHHHH-hCCCHH---HhhhhcCccccHHHHHHc---CCcccccccCHHHHHhhHhhhhc
Confidence 4899999999997 899976 899999 99999999 46699995 69999999999864
No 172
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=95.33 E-value=0.039 Score=57.58 Aligned_cols=21 Identities=14% Similarity=0.324 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCCCeEEEEeCC
Q psy2719 609 TKRVLERLANMPDVNIGIISGR 630 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR 630 (808)
.++.|+.+.+ .|++++++|+|
T Consensus 119 a~elL~~l~~-~G~~i~iVTnr 139 (237)
T TIGR01672 119 ARQLIDMHQR-RGDAIFFVTGR 139 (237)
T ss_pred HHHHHHHHHH-CCCEEEEEeCC
Confidence 5666766654 49999999999
No 173
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.13 E-value=0.017 Score=57.44 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=26.6
Q ss_pred eEEEEecccccccCCC---CCCccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTS---HPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~---~~~~~~i~~~~~~~L~~L~~~ 580 (808)
+++|+|.||||+.... .+++..+.+.+.++|++|+++
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~ 41 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM 41 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC
Confidence 6899999999995322 112334567888899999877
No 174
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.12 E-value=0.023 Score=54.12 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=17.4
Q ss_pred CCeEEEEeCCChhhHHHhcC
Q psy2719 621 DVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~ 640 (808)
|++++|+|||.-..++....
T Consensus 51 Gi~vAIITGr~s~ive~Ra~ 70 (170)
T COG1778 51 GIKVAIITGRDSPIVEKRAK 70 (170)
T ss_pred CCeEEEEeCCCCHHHHHHHH
Confidence 99999999999888877664
No 175
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.39 E-value=0.11 Score=50.19 Aligned_cols=62 Identities=19% Similarity=0.294 Sum_probs=48.5
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMP 620 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~p 620 (808)
.+-+-+++|+|.||++... ...+|++++-+..+++.
T Consensus 26 ~Gikgvi~DlDNTLv~wd~----~~~tpe~~~W~~e~k~~---------------------------------------- 61 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDN----PDATPELRAWLAELKEA---------------------------------------- 61 (175)
T ss_pred cCCcEEEEeccCceecccC----CCCCHHHHHHHHHHHhc----------------------------------------
Confidence 4567899999999999754 36789999999999988
Q ss_pred CCeEEEEeCCChhhHHHhcCccceEE
Q psy2719 621 DVNIGIISGRTLENLMKMVNIEKVTY 646 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~~~~~~l 646 (808)
|+.++|+|.....-+..+....++.+
T Consensus 62 gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 62 GIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred CCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 99999999877766666654333333
No 176
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=94.35 E-value=1.3 Score=50.13 Aligned_cols=140 Identities=17% Similarity=0.230 Sum_probs=78.9
Q ss_pred eEEEEEcC-ccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcc------CCCC
Q psy2719 312 KVILGVDR-LDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGR------FSKP 384 (808)
Q Consensus 312 ~iil~V~R-l~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~------~g~~ 384 (808)
.+++.-+| -+-.++++.+++|++.+.++ |++ .++....+.. +++.+++.+++. .++.. ....
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~----~~v~~~~~~~----~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPF----VFLAAIVPSL----SLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCe----EEEEEeCCCC----CHHHHHHHHHhc--CceecCCccccchhh
Confidence 34556667 45557888999999998655 543 3544443321 222333333211 11000 0000
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCC------ccc---c-CceE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGA------GGM---M-HEAL 454 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~------~~~---l-~~~l 454 (808)
...++.++ ....++..+|++||++|..| |.+..|++++++| .|+--+.+. .+. + ..++
T Consensus 277 ~~~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P----~Ilip~~~~q~na~~~~~~~~l~g~~~ 344 (396)
T TIGR03492 277 QKGTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP----VIQLPGKGPQFTYGFAEAQSRLLGGSV 344 (396)
T ss_pred ccCceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC----EEEEeCCCCHHHHHHHHhhHhhcCCEE
Confidence 00012222 12467889999999999886 4566999999764 343331111 111 1 3466
Q ss_pred EECCCCHHHHHHHHHHHhCC
Q psy2719 455 LVNPYEIDAAANVLHRALCM 474 (808)
Q Consensus 455 lvnP~d~~~lA~ai~~~L~~ 474 (808)
.+...|++.++++|.++|+.
T Consensus 345 ~l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 345 FLASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred ecCCCCHHHHHHHHHHHHcC
Confidence 66667889999999999974
No 177
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.29 E-value=0.037 Score=53.32 Aligned_cols=36 Identities=25% Similarity=0.206 Sum_probs=24.9
Q ss_pred EEEEecccccccCCCCC-----CccCCCHHHHHHHHHHhcC
Q psy2719 545 SLILDYDGTLTPLTSHP-----DLAVMSEETKRVLERLANM 580 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~-----~~~~i~~~~~~~L~~L~~~ 580 (808)
+++||+||||++..... +...+-+.+.++|+.|+++
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~ 42 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA 42 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC
Confidence 68999999999864311 0123456777888888776
No 178
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.98 E-value=0.059 Score=48.45 Aligned_cols=29 Identities=21% Similarity=0.232 Sum_probs=23.2
Q ss_pred EEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 546 i~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
|+||+||||... ..+-|.+.++|++|++.
T Consensus 1 ~l~D~dGvl~~g------~~~ipga~e~l~~L~~~ 29 (101)
T PF13344_consen 1 FLFDLDGVLYNG------NEPIPGAVEALDALRER 29 (101)
T ss_dssp EEEESTTTSEET------TEE-TTHHHHHHHHHHT
T ss_pred CEEeCccEeEeC------CCcCcCHHHHHHHHHHc
Confidence 689999999973 24557789999999988
No 179
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=93.91 E-value=0.13 Score=55.65 Aligned_cols=57 Identities=18% Similarity=0.158 Sum_probs=40.5
Q ss_pred CceEEEEecccccccCCCCCC-------ccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHH
Q psy2719 542 CKLSLILDYDGTLTPLTSHPD-------LAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLE 614 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~-------~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~ 614 (808)
+.+++++|+||||........ +..+.+.+.++|++|.+.
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---------------------------------- 202 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA---------------------------------- 202 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----------------------------------
Confidence 346899999999997543100 234566777777777766
Q ss_pred HHhCCCCCeEEEEeCCChhhHHHh
Q psy2719 615 RLANMPDVNIGIISGRTLENLMKM 638 (808)
Q Consensus 615 ~l~~~pg~~v~I~SGR~~~~l~~~ 638 (808)
|+.++++|||+....+..
T Consensus 203 ------g~~i~i~T~r~~~~~~~~ 220 (300)
T PHA02530 203 ------GYEIIVVSGRDGVCEEDT 220 (300)
T ss_pred ------CCEEEEEeCCChhhHHHH
Confidence 899999999987655443
No 180
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.72 E-value=0.14 Score=50.74 Aligned_cols=36 Identities=19% Similarity=0.099 Sum_probs=29.0
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
..-+++++|+||||+... ...+.+.+.++|++|++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~----~~~~~pgv~e~L~~Lk~~ 58 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD----HNEAYPALRDWIEELKAA 58 (170)
T ss_pred CCCCEEEEecCCccccCC----CCCcChhHHHHHHHHHHc
Confidence 345799999999999742 236778899999999887
No 181
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=93.54 E-value=0.07 Score=52.24 Aligned_cols=37 Identities=27% Similarity=0.302 Sum_probs=24.2
Q ss_pred eEEEEecccccccCCC------CCCcc-CCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTS------HPDLA-VMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~------~~~~~-~i~~~~~~~L~~L~~~ 580 (808)
++.+||+||||....+ ++++- .+++.+.++|++|.+.
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~ 44 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK 44 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc
Confidence 4789999999987532 12332 3456788899998777
No 182
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.89 E-value=0.14 Score=53.66 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=22.7
Q ss_pred EEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 546 i~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
++||+||||++.. .+.+.+.++|+.+++.
T Consensus 1 ~lfD~DGvL~~~~------~~~~~a~e~i~~l~~~ 29 (236)
T TIGR01460 1 FLFDIDGVLWLGH------KPIPGAAEALNRLRAK 29 (236)
T ss_pred CEEeCcCccCcCC------ccCcCHHHHHHHHHHC
Confidence 5789999999832 2345889999999877
No 183
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.50 E-value=0.1 Score=51.15 Aligned_cols=37 Identities=22% Similarity=0.209 Sum_probs=25.0
Q ss_pred eEEEEecccccccCCCC------CCccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSH------PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~------~~~~~i~~~~~~~L~~L~~~ 580 (808)
+++|||.||||....+. ++...+-+.+.++|++|.++
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~ 44 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA 44 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC
Confidence 57999999999874221 11123446677888888776
No 184
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=92.42 E-value=1.9 Score=46.92 Aligned_cols=141 Identities=11% Similarity=0.095 Sum_probs=88.8
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
+..|+-=-.-|++-++...|+++.+...+ ++.++ | .-+-+ ..++++.++|.+...++ ||.. .+.
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~------~~kIi-v-PLsYg--~~n~~Yi~~V~~~~~~l---F~~~---~~~ 248 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGD------DVKII-V-PLSYG--ANNQAYIQQVIQAGKEL---FGAE---NFQ 248 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCC------CeEEE-E-ECCCC--CchHHHHHHHHHHHHHh---cCcc---cee
Confidence 34444444667888888888877654321 22322 1 11211 12345667777666554 3322 456
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-ceEEE----CCCCHHHH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EALLV----NPYEIDAA 464 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~~llv----nP~d~~~l 464 (808)
.+..+++.+|+.++++.||+.++... ..|+|..++= +.+ |.++++|+..-....+. .++.| +.-|...+
T Consensus 249 iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lL-l~~----G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v 323 (360)
T PF07429_consen 249 ILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLL-LQL----GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALV 323 (360)
T ss_pred EhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHH-HHc----CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHH
Confidence 67899999999999999999999997 5999987652 444 46799999877766664 34433 44455555
Q ss_pred HHHHHHHh
Q psy2719 465 ANVLHRAL 472 (808)
Q Consensus 465 A~ai~~~L 472 (808)
++|=+++.
T Consensus 324 ~ea~rql~ 331 (360)
T PF07429_consen 324 REAQRQLA 331 (360)
T ss_pred HHHHHHHh
Confidence 55544443
No 185
>PRK06769 hypothetical protein; Validated
Probab=92.40 E-value=0.13 Score=51.16 Aligned_cols=39 Identities=23% Similarity=0.178 Sum_probs=27.6
Q ss_pred CceEEEEecccccccCCCCC--CccCCCHHHHHHHHHHhcC
Q psy2719 542 CKLSLILDYDGTLTPLTSHP--DLAVMSEETKRVLERLANM 580 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~--~~~~i~~~~~~~L~~L~~~ 580 (808)
.-|+|++|.||||..+..-. +.-.+-+.+.+.|++|++.
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~ 43 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN 43 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC
Confidence 45789999999997653211 2234567888889988877
No 186
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=92.38 E-value=0.28 Score=51.21 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=17.7
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCC
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRT 631 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~ 631 (808)
-.++.|+.|-+ .|+.++++|||+
T Consensus 118 Ga~elL~~L~~-~G~~I~iVTnR~ 140 (237)
T PRK11009 118 VARQLIDMHVK-RGDSIYFITGRT 140 (237)
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCC
Confidence 36677777743 499999999996
No 187
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.35 E-value=0.23 Score=57.75 Aligned_cols=51 Identities=24% Similarity=0.207 Sum_probs=33.8
Q ss_pred CCceEEEEecccccccCCC------CCCccC-CCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 541 NCKLSLILDYDGTLTPLTS------HPDLAV-MSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~------~~~~~~-i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
.+++++|||+||||....+ ++++-+ +.+.+.+.|++|.++ +-.+.|+|..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~ 223 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQG 223 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCc
Confidence 4567999999999996432 112222 467888999999876 44455555544
No 188
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=92.32 E-value=0.12 Score=51.64 Aligned_cols=38 Identities=21% Similarity=0.284 Sum_probs=24.3
Q ss_pred ceEEEEecccccccCCCC----CCccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSH----PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~----~~~~~i~~~~~~~L~~L~~~ 580 (808)
.|+++||.||||...... .....+-+.+.++|++|++.
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~ 44 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA 44 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC
Confidence 368999999998654311 11123446667777777766
No 189
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=91.99 E-value=0.38 Score=51.44 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=38.0
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC-C-CCc-cccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD-S-SPT-VKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~-~-~~~-vk~~A~~~~~~ 805 (808)
.-.|...++.++++ +|++++ ++++|| |++|-+.+|-..+.|.-| + .+. .+..++++.++
T Consensus 156 ~Kp~p~~~~~~~~~-~g~~~~---~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~ 221 (272)
T PRK13223 156 KKPDPAALLFVMKM-AGVPPS---QSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDD 221 (272)
T ss_pred CCCCcHHHHHHHHH-hCCChh---HEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECC
Confidence 34567788999986 798865 799999 888888886222223333 2 222 23467777653
No 190
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.94 E-value=0.28 Score=50.75 Aligned_cols=17 Identities=29% Similarity=0.241 Sum_probs=14.2
Q ss_pred CCceEEEEecccccccC
Q psy2719 541 NCKLSLILDYDGTLTPL 557 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~ 557 (808)
.++.+++||+|-|+++.
T Consensus 75 dg~~A~V~DIDET~LsN 91 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSN 91 (229)
T ss_pred CCCcEEEEccccccccC
Confidence 35678999999999984
No 191
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.66 E-value=0.21 Score=55.20 Aligned_cols=48 Identities=19% Similarity=0.248 Sum_probs=34.9
Q ss_pred ceEEEEecccccccCC------CCCCccCCCHHHHHHHHHHhcCCCCcccccccc
Q psy2719 543 KLSLILDYDGTLTPLT------SHPDLAVMSEETKRVLERLANMPDVNIGIISGR 591 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~------~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr 591 (808)
++++|||.||||.... ..++...+.|.+.++|.+|+++ +..++|+|+.
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~-G~kL~IvTNq 55 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA-GYKLVMVTNQ 55 (354)
T ss_pred CcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC-CCeEEEEECC
Confidence 5789999999999852 1223456778899999999765 4456666664
No 192
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.65 E-value=0.27 Score=48.32 Aligned_cols=37 Identities=30% Similarity=0.263 Sum_probs=31.1
Q ss_pred CCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 540 GNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 540 ~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
...-+.++||.|+||++. ....++++..+.++++++.
T Consensus 38 ~~Gik~li~DkDNTL~~~----~~~~i~~~~~~~~~~l~~~ 74 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPP----YEDEIPPEYAEWLNELKKQ 74 (168)
T ss_pred hcCceEEEEcCCCCCCCC----CcCcCCHHHHHHHHHHHHH
Confidence 356789999999999984 4458999999999999876
No 193
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=91.43 E-value=8.2 Score=42.99 Aligned_cols=82 Identities=20% Similarity=0.282 Sum_probs=53.8
Q ss_pred HHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCC--cccc---------CceEEECCCC--HHHHH
Q psy2719 399 EELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGA--GGMM---------HEALLVNPYE--IDAAA 465 (808)
Q Consensus 399 ~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~--~~~l---------~~~llvnP~d--~~~lA 465 (808)
+++.++|++||+.+.=| =++++-|..|++.| .|+=-.... .++. ..|+.+.-.+ ++.++
T Consensus 244 ~dm~~~~~~ADLvIsRa----Ga~Ti~E~~a~g~P----~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRA----GALTIAELLALGVP----AILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCC----cccHHHHHHHhCCC----EEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 57999999999988644 25899999999764 333333333 1222 1377776666 88999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHhHH
Q psy2719 466 NVLHRALCMPRDERELRMSQLRHR 489 (808)
Q Consensus 466 ~ai~~~L~~~~~e~~~r~~~~~~~ 489 (808)
+.|.++++. ++...++.++.+..
T Consensus 316 ~~i~~l~~~-~~~l~~m~~~a~~~ 338 (357)
T COG0707 316 ELILRLLSN-PEKLKAMAENAKKL 338 (357)
T ss_pred HHHHHHhcC-HHHHHHHHHHHHhc
Confidence 999999974 33333333333433
No 194
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=91.30 E-value=0.23 Score=51.25 Aligned_cols=16 Identities=31% Similarity=0.634 Sum_probs=13.4
Q ss_pred ceEEEEecccccccCC
Q psy2719 543 KLSLILDYDGTLTPLT 558 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~ 558 (808)
+++++||+||||+...
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 4589999999999853
No 195
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=91.29 E-value=0.33 Score=48.23 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeCC-ChhhHHHhc
Q psy2719 607 EETKRVLERLANMPDVNIGIISGR-TLENLMKMV 639 (808)
Q Consensus 607 ~~~~~~l~~l~~~pg~~v~I~SGR-~~~~l~~~~ 639 (808)
+.+.+.|+.|.+ .|..++|+|+. ....+...+
T Consensus 48 pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 48 KEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 345666666654 48999999988 666555444
No 196
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=91.28 E-value=0.21 Score=48.07 Aligned_cols=30 Identities=27% Similarity=0.495 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.+.|+.|.+ .|++++|+|++....+...+
T Consensus 69 ~~e~l~~L~~-~g~~~~i~T~~~~~~~~~~~ 98 (154)
T TIGR01549 69 AADLLKRLKE-AGIKLGIISNGSLRAQKLLL 98 (154)
T ss_pred HHHHHHHHHH-CcCeEEEEeCCchHHHHHHH
Confidence 4566666654 36777888777765554433
No 197
>PTZ00445 p36-lilke protein; Provisional
Probab=91.20 E-value=0.42 Score=48.39 Aligned_cols=49 Identities=10% Similarity=0.158 Sum_probs=32.7
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe-CHHHHHhccCCcc-EEEeCC
Q psy2719 738 AKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-NEDAMLALQGIAC-TFRVDS 791 (808)
Q Consensus 738 v~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-D~~Mf~~~~~~~~-~vav~~ 791 (808)
+.|- ...|-.=++.++++ +|++++ ++++|= +..-.++|...|+ ++.+.+
T Consensus 156 ~KPd-p~iK~yHle~ll~~-~gl~pe---E~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 156 DAPM-PLDKSYHLKQVCSD-FNVNPD---EILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred cCCC-ccchHHHHHHHHHH-cCCCHH---HeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 3554 56777777889987 899875 789998 4555666654453 344443
No 198
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=91.04 E-value=0.18 Score=51.69 Aligned_cols=14 Identities=36% Similarity=0.591 Sum_probs=12.4
Q ss_pred eEEEEecccccccC
Q psy2719 544 LSLILDYDGTLTPL 557 (808)
Q Consensus 544 rli~~D~DGTLl~~ 557 (808)
++|+||+||||++.
T Consensus 4 ~~viFD~DGTL~ds 17 (214)
T PRK13288 4 NTVLFDLDGTLINT 17 (214)
T ss_pred cEEEEeCCCcCccC
Confidence 58999999999983
No 199
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=90.83 E-value=0.3 Score=51.16 Aligned_cols=43 Identities=12% Similarity=0.068 Sum_probs=32.9
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
-++++||+||||... ..+.|.+.++|++|++. +..++++|+.+
T Consensus 8 ~~~~~~D~dG~l~~~------~~~~pga~e~L~~L~~~-G~~~~ivTN~~ 50 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG------NHTYPGAVQNLNKIIAQ-GKPVYFVSNSP 50 (242)
T ss_pred CCEEEEecccccccC------CccCccHHHHHHHHHHC-CCEEEEEeCCC
Confidence 357999999999873 24578899999999876 55677776643
No 200
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=90.74 E-value=0.42 Score=47.03 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=29.3
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhc
Q psy2719 740 PPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLAL 780 (808)
Q Consensus 740 p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~ 780 (808)
+. +.+|+.+++.+++. ++++.+ .++++| |.+|++.+
T Consensus 138 ~~-~~~K~~~l~~~~~~-~~~~~~---~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 138 PE-GECKGKVLKELLEE-SKITLK---KIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CC-cchHHHHHHHHHHH-hCCCHH---HEEEEeCCHHHHHHHhcC
Confidence 44 78999999998886 687754 799999 99998764
No 201
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=90.67 E-value=0.29 Score=47.50 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=21.4
Q ss_pred EEEEecccccccCC------CCCCccCCCHHHHHHHHHHhcC
Q psy2719 545 SLILDYDGTLTPLT------SHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 545 li~~D~DGTLl~~~------~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
++++|+|||++... +.-......+.+.++.+++.++
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~ 42 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN 42 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC
Confidence 47899999999741 1001113445566666666665
No 202
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=90.63 E-value=0.32 Score=51.67 Aligned_cols=18 Identities=28% Similarity=0.427 Sum_probs=14.6
Q ss_pred CCceEEEEecccccccCC
Q psy2719 541 NCKLSLILDYDGTLTPLT 558 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~ 558 (808)
.++..|+||+|+|+++..
T Consensus 73 ~kp~AVV~DIDeTvLdns 90 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNS 90 (266)
T ss_pred CCCCEEEEeCccccccCh
Confidence 345799999999999753
No 203
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=90.18 E-value=1.8 Score=48.28 Aligned_cols=132 Identities=15% Similarity=0.136 Sum_probs=80.0
Q ss_pred EcCccccCCh-HHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC
Q psy2719 317 VDRLDYTKGL-VHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGC 395 (808)
Q Consensus 317 V~Rl~~~KGi-~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~ 395 (808)
=+|-...|-+ +.+++|++++.+++|+++ +++...+. . ..+.+++.....+.. .++...
T Consensus 192 GSR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~--- 250 (373)
T PF02684_consen 192 GSRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII--- 250 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc---
Confidence 5676655554 888999999999999874 44333221 1 122233333222211 122222
Q ss_pred CCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC-------------CceEEEcCCCCCccccCc-----eEEEC
Q psy2719 396 IGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE-------------PGVLILSPFAGAGGMMHE-----ALLVN 457 (808)
Q Consensus 396 v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~-------------~g~vVlS~~~G~~~~l~~-----~llvn 457 (808)
..+...++++||+.+++| |.+.+|++..++|. ...+|-..+.|....+-+ -++-+
T Consensus 251 --~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~ 323 (373)
T PF02684_consen 251 --EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQE 323 (373)
T ss_pred --CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcc
Confidence 234567899999999999 89999999998761 111222334444443322 24445
Q ss_pred CCCHHHHHHHHHHHhCCCH
Q psy2719 458 PYEIDAAANVLHRALCMPR 476 (808)
Q Consensus 458 P~d~~~lA~ai~~~L~~~~ 476 (808)
-.+++.+++++..+|..+.
T Consensus 324 ~~~~~~i~~~~~~ll~~~~ 342 (373)
T PF02684_consen 324 DATPENIAAELLELLENPE 342 (373)
T ss_pred cCCHHHHHHHHHHHhcCHH
Confidence 5688999999999998543
No 204
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=90.07 E-value=8.7 Score=43.16 Aligned_cols=99 Identities=12% Similarity=0.162 Sum_probs=60.3
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccc----c---CceEEECC--CCH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGM----M---HEALLVNP--YEI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~----l---~~~llvnP--~d~ 461 (808)
.+.+++++. .++..||++|..+ |.| +.+|++++++| +|+.-..+-... + +.|..++. .+.
T Consensus 278 ~~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~G~P----~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~ 346 (392)
T TIGR01426 278 EVRQWVPQL---EILKKADAFITHG---GMN-STMEALFNGVP----MVAVPQGADQPMTARRIAELGLGRHLPPEEVTA 346 (392)
T ss_pred EEeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHhCCC----EEecCCcccHHHHHHHHHHCCCEEEeccccCCH
Confidence 445788875 5688999988654 555 67999999754 555433322111 1 23666654 467
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC-CHHHHHHHH
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQQL-DVNHWMNSF 502 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~-~~~~W~~~~ 502 (808)
++++++|.++|+.+ +.+++.+.+.+.+... .....++..
T Consensus 347 ~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 347 EKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 89999999999753 3444445454444433 444444433
No 205
>PRK11590 hypothetical protein; Provisional
Probab=90.07 E-value=0.3 Score=50.07 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=19.6
Q ss_pred HHHHH-HHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVL-ERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l-~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
.++.| +.+. ..|..++|+|+.+...++.++
T Consensus 100 a~e~L~~~l~-~~G~~l~IvSas~~~~~~~il 130 (211)
T PRK11590 100 VQERLTTYLL-SSDADVWLITGSPQPLVEQVY 130 (211)
T ss_pred HHHHHHHHHH-hCCCEEEEEeCCcHHHHHHHH
Confidence 45555 3343 247889999998877666554
No 206
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=90.04 E-value=0.35 Score=49.62 Aligned_cols=54 Identities=15% Similarity=0.255 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
.|+..++.++++ ++++++ +++++| |++|.+.++ . +++++..+.++..|+++..+
T Consensus 152 ~k~~~~~~~~~~-~~~~~~---~~i~iGDs~~Di~aa~~ag-~--~i~~~~~~~~~~~a~~~i~~ 209 (219)
T TIGR00338 152 YKGKTLLILLRK-EGISPE---NTVAVGDGANDLSMIKAAG-L--GIAFNAKPKLQQKADICINK 209 (219)
T ss_pred ccHHHHHHHHHH-cCCCHH---HEEEEECCHHHHHHHHhCC-C--eEEeCCCHHHHHhchhccCC
Confidence 588899999886 788765 799999 888888884 4 47887777788999998653
No 207
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=89.96 E-value=0.42 Score=49.73 Aligned_cols=15 Identities=27% Similarity=0.514 Sum_probs=13.0
Q ss_pred EEEEecccccccCCC
Q psy2719 545 SLILDYDGTLTPLTS 559 (808)
Q Consensus 545 li~~D~DGTLl~~~~ 559 (808)
|++||+|+||++..+
T Consensus 2 LvvfDFD~TIvd~ds 16 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDS 16 (234)
T ss_pred EEEEeCCCCccCCcc
Confidence 789999999998654
No 208
>PLN02954 phosphoserine phosphatase
Probab=89.77 E-value=0.35 Score=49.79 Aligned_cols=56 Identities=13% Similarity=0.038 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC--C-CccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS--S-PTVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~--~-~~vk~~A~~~~~~ 805 (808)
+-.|..+++.++++ +|.+ ++++|| |+.|.++++ ..+.++.+. . +.....|+|+..+
T Consensus 153 ~~~K~~~i~~~~~~-~~~~-----~~i~iGDs~~Di~aa~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 215 (224)
T PLN02954 153 SGGKAEAVQHIKKK-HGYK-----TMVMIGDGATDLEARKPGG-ADLFIGYGGVQVREAVAAKADWFVTD 215 (224)
T ss_pred CccHHHHHHHHHHH-cCCC-----ceEEEeCCHHHHHhhhcCC-CCEEEecCCCccCHHHHhcCCEEECC
Confidence 34688888888875 6643 689999 888855532 343344442 1 2234457776653
No 209
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=89.46 E-value=2.8 Score=45.00 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=58.3
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
+++++..|-.++.+....+++|+..+. +++ ++ .+++| +.. +.+ +++++.+.. + ..+.
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~--~i-~vv~G-~~~---~~~----~~l~~~~~~-~--------~~i~ 227 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INI--SI-TLVTG-SSN---PNL----DELKKFAKE-Y--------PNII 227 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCc--eE-EEEEC-CCC---cCH----HHHHHHHHh-C--------CCEE
Confidence 578999999999887777888876532 222 22 23344 321 122 334444332 1 1233
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
+.++ .+++..+|+.||+++.+ -|.++.|+++++.|
T Consensus 228 -~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P 262 (279)
T TIGR03590 228 -LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLGLP 262 (279)
T ss_pred -EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcCCC
Confidence 3333 36899999999999984 45899999999764
No 210
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.09 E-value=0.13 Score=53.51 Aligned_cols=16 Identities=19% Similarity=0.331 Sum_probs=13.8
Q ss_pred CCceEEEEeccccccc
Q psy2719 541 NCKLSLILDYDGTLTP 556 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~ 556 (808)
.++..++||+|+|+++
T Consensus 70 ~~~~avv~DIDeTvLs 85 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLS 85 (229)
T ss_dssp TSEEEEEEESBTTTEE
T ss_pred CCCcEEEEECCccccc
Confidence 4567999999999986
No 211
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=88.92 E-value=0.59 Score=47.00 Aligned_cols=49 Identities=10% Similarity=0.120 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWK 800 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~ 800 (808)
+|+.+++.++++ +|++++ +++++| |.+|++.++ +.+++...+.+...|+
T Consensus 147 ~k~~~~~~~~~~-~~~~~~---~~i~iGDs~~D~~~a~~ag---~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 147 NKGEAVERLKRE-LNPSLT---ETVAVGDSKNDLPMFEVAD---ISISLGDEGHADYLAK 199 (201)
T ss_pred cHHHHHHHHHHH-hCCCHH---HEEEEcCCHhHHHHHHhcC---CeEEECCCccchhhcc
Confidence 698899999886 788764 799999 899999984 4588876555555553
No 212
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=88.61 E-value=0.83 Score=43.99 Aligned_cols=31 Identities=6% Similarity=0.071 Sum_probs=22.5
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
.+.+.|+.|.. ++.++|+|..+...++..+.
T Consensus 49 G~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 49 GVDEFLKRASE--LFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CHHHHHHHHHh--ccEEEEEeCCcHHHHHHHHH
Confidence 45667777753 78999999988877665553
No 213
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=88.33 E-value=8.9 Score=41.35 Aligned_cols=125 Identities=14% Similarity=0.162 Sum_probs=82.6
Q ss_pred CCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEE-EEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 310 NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQ-ISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 310 ~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~-ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
++..|+-=-.-|++-++...|+++.+...+ ++.++. .+.|+ ++ +++.++|.+...++ ||. ..
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn----~~Yi~~V~~~~~~l---F~~---~~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN----QAYIEEVRQAGLAL---FGA---EN 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC----HHHHHHHHHHHHHh---cCc---cc
Confidence 344444445678899999999998776543 233332 23332 22 34566776666554 442 25
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-ceEEE
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EALLV 456 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~~llv 456 (808)
+..++..++.+|+.++++.||+.++.-- .+|+|..++=- .. |.++++|+..-.-..+. .|+-|
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~----G~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL----GKPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC----CCcEEEecCCchHHHHHhCCCeE
Confidence 6778899999999999999999998875 69999887643 33 35688887766655563 34433
No 214
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=87.80 E-value=0.36 Score=48.95 Aligned_cols=13 Identities=38% Similarity=0.659 Sum_probs=11.7
Q ss_pred eEEEEeccccccc
Q psy2719 544 LSLILDYDGTLTP 556 (808)
Q Consensus 544 rli~~D~DGTLl~ 556 (808)
++++||+||||++
T Consensus 2 ~~v~FD~DGTL~~ 14 (205)
T PRK13582 2 EIVCLDLEGVLVP 14 (205)
T ss_pred eEEEEeCCCCChh
Confidence 5899999999995
No 215
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=87.11 E-value=0.64 Score=49.10 Aligned_cols=16 Identities=25% Similarity=0.308 Sum_probs=13.3
Q ss_pred CceEEEEecccccccC
Q psy2719 542 CKLSLILDYDGTLTPL 557 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~ 557 (808)
.+-+++||+|+|+++.
T Consensus 100 ~~dA~V~DIDET~LsN 115 (275)
T TIGR01680 100 EKDTFLFNIDGTALSN 115 (275)
T ss_pred CCCEEEEECccccccC
Confidence 3568999999999963
No 216
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=87.09 E-value=18 Score=40.43 Aligned_cols=71 Identities=11% Similarity=0.126 Sum_probs=50.2
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccc-cC---ceEEECCCCHHHHH
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGM-MH---EALLVNPYEIDAAA 465 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~-l~---~~llvnP~d~~~lA 465 (808)
+.+.+.++..++.+|++.|++++-.|. |. ..||.+.++| ++.+. -.++ +. +.++| +.|++++.
T Consensus 264 v~l~~~l~~~~~l~Ll~~a~~vitdSS----gg-i~EA~~lg~P---vv~l~----~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FRLFKSLGQERYLSLLKNADAVIGNSS----SG-IIEAPSFGVP---TINIG----TRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEEcCh----hH-HHhhhhcCCC---EEeec----CCchhhhhcCeEEEe-CCCHHHHH
Confidence 456789999999999999999995552 22 2899999754 22222 2333 22 24557 67999999
Q ss_pred HHHHHHhC
Q psy2719 466 NVLHRALC 473 (808)
Q Consensus 466 ~ai~~~L~ 473 (808)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
No 217
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=87.00 E-value=1.5 Score=48.08 Aligned_cols=38 Identities=24% Similarity=0.252 Sum_probs=26.2
Q ss_pred ceEEEEecccccccCC--CC-CC---ccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLT--SH-PD---LAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~--~~-~~---~~~i~~~~~~~L~~L~~~ 580 (808)
.|+|++|+|+||.... ++ +. ...+.+.+.+.|++|.+.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~ 46 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ 46 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC
Confidence 5799999999998753 11 11 012347788889998876
No 218
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=86.73 E-value=0.84 Score=48.50 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=29.8
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCcccccccc
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGR 591 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr 591 (808)
..++||+||||..- ...-|...++|++|+++ +..++++|..
T Consensus 9 ~~~l~DlDGvl~~G------~~~ipga~e~l~~L~~~-g~~~iflTNn 49 (269)
T COG0647 9 DGFLFDLDGVLYRG------NEAIPGAAEALKRLKAA-GKPVIFLTNN 49 (269)
T ss_pred CEEEEcCcCceEeC------CccCchHHHHHHHHHHc-CCeEEEEeCC
Confidence 46999999999973 24557789999999987 3444444433
No 219
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=86.37 E-value=1.1 Score=44.28 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=22.8
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLAL 780 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~ 780 (808)
+..|+..++.++++ + .+ .++++| |+.|.+.+
T Consensus 147 g~~K~~~~~~~~~~-~---~~---~~i~iGD~~~D~~aa~~~ 181 (188)
T TIGR01489 147 GCCKGKVIHKLSEP-K---YQ---HIIYIGDGVTDVCPAKLS 181 (188)
T ss_pred CCCHHHHHHHHHhh-c---Cc---eEEEECCCcchhchHhcC
Confidence 77898888887764 2 22 689999 77777666
No 220
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=86.32 E-value=1.7 Score=51.45 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
+|...++.+.+. + . .++++| |.+|++.++ ++++|++ .+..+..||+++.+
T Consensus 435 ~K~~~v~~l~~~--~---~---~v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~~ 489 (556)
T TIGR01525 435 DKLAIVKELQEE--G---G---VVAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLLN 489 (556)
T ss_pred HHHHHHHHHHHc--C---C---EEEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEeC
Confidence 566666665432 1 1 699999 999999995 4588885 56677889998875
No 221
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=85.51 E-value=0.74 Score=46.95 Aligned_cols=48 Identities=15% Similarity=0.197 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCcccccccccc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGS 803 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~ 803 (808)
.|...++.+ +. .+. +++++| |++|++.++ .+ +++...+.|++.|+-..
T Consensus 132 ~K~~~l~~l-~~-~~~------~~v~vGDs~nDl~ml~~Ag-~~--ia~~ak~~~~~~~~~~~ 183 (203)
T TIGR02137 132 PKRQSVIAF-KS-LYY------RVIAAGDSYNDTTMLSEAH-AG--ILFHAPENVIREFPQFP 183 (203)
T ss_pred hHHHHHHHH-Hh-hCC------CEEEEeCCHHHHHHHHhCC-CC--EEecCCHHHHHhCCCCC
Confidence 688888877 33 342 589999 999999995 44 88888888888887654
No 222
>PRK10671 copA copper exporting ATPase; Provisional
Probab=84.91 E-value=2.7 Score=52.40 Aligned_cols=49 Identities=8% Similarity=0.058 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN 804 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~ 804 (808)
+|..+++.+.++ .. .++++| |.+|++.++ . +++|++ .+..++.||+++-
T Consensus 700 ~K~~~i~~l~~~-----~~---~v~~vGDg~nD~~al~~Ag-v--gia~g~g~~~a~~~ad~vl~ 753 (834)
T PRK10671 700 GKAEAIKRLQSQ-----GR---QVAMVGDGINDAPALAQAD-V--GIAMGGGSDVAIETAAITLM 753 (834)
T ss_pred HHHHHHHHHhhc-----CC---EEEEEeCCHHHHHHHHhCC-e--eEEecCCCHHHHHhCCEEEe
Confidence 588777776432 11 699999 999999995 4 599996 6778999998775
No 223
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=84.88 E-value=26 Score=38.89 Aligned_cols=133 Identities=13% Similarity=0.147 Sum_probs=75.5
Q ss_pred CCCeEEEEEcCcccc---CChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCC
Q psy2719 309 ENLKVILGVDRLDYT---KGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPN 385 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~---KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~ 385 (808)
.++.+++..-|.... .....++.+++.+.+. +++ .+|....++ +.....+.+...+++
T Consensus 179 ~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~----~vi~~~hn~-------p~~~~~i~~~l~~~~------- 239 (346)
T PF02350_consen 179 PKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNV----PVIFPLHNN-------PRGSDIIIEKLKKYD------- 239 (346)
T ss_dssp TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTE----EEEEE--S--------HHHHHHHHHHHTT-T-------
T ss_pred CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCC----cEEEEecCC-------chHHHHHHHHhcccC-------
Confidence 344455555555443 3456777788887776 443 345444322 123333333332221
Q ss_pred CccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHH-HHHHhccCCCceEEEcCCCCCcccc---CceEEECCCCH
Q psy2719 386 WSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAK-EYVACQIREPGVLILSPFAGAGGMM---HEALLVNPYEI 461 (808)
Q Consensus 386 ~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~-Eama~~~~~~g~vVlS~~~G~~~~l---~~~llvnP~d~ 461 (808)
.++ +..++++.++.++++.|+++|--| | .+. ||..+++| +|.=...|-.++. ...++|. .|.
T Consensus 240 --~v~-~~~~l~~~~~l~ll~~a~~vvgdS-----s-GI~eEa~~lg~P----~v~iR~~geRqe~r~~~~nvlv~-~~~ 305 (346)
T PF02350_consen 240 --NVR-LIEPLGYEEYLSLLKNADLVVGDS-----S-GIQEEAPSLGKP----VVNIRDSGERQEGRERGSNVLVG-TDP 305 (346)
T ss_dssp --TEE-EE----HHHHHHHHHHESEEEESS-----H-HHHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSH
T ss_pred --CEE-EECCCCHHHHHHHHhcceEEEEcC-----c-cHHHHHHHhCCe----EEEecCCCCCHHHHhhcceEEeC-CCH
Confidence 344 457889999999999999998777 3 345 99999654 5555555666554 2466675 799
Q ss_pred HHHHHHHHHHhCC
Q psy2719 462 DAAANVLHRALCM 474 (808)
Q Consensus 462 ~~lA~ai~~~L~~ 474 (808)
+++.++|.+++..
T Consensus 306 ~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 306 EAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999964
No 224
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=84.81 E-value=1.1 Score=45.92 Aligned_cols=29 Identities=10% Similarity=0.143 Sum_probs=18.5
Q ss_pred HHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 610 KRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 610 ~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
++.++.|.+ .|+.++|+||.....++.++
T Consensus 76 ~e~l~~l~~-~g~~~~IvS~~~~~~i~~il 104 (214)
T TIGR03333 76 REFVAFINE-HGIPFYVISGGMDFFVYPLL 104 (214)
T ss_pred HHHHHHHHH-CCCeEEEECCCcHHHHHHHH
Confidence 444555533 47889999988666555544
No 225
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=84.61 E-value=0.71 Score=47.62 Aligned_cols=15 Identities=33% Similarity=0.538 Sum_probs=12.9
Q ss_pred ceEEEEecccccccC
Q psy2719 543 KLSLILDYDGTLTPL 557 (808)
Q Consensus 543 ~rli~~D~DGTLl~~ 557 (808)
.+.|+||+||||++.
T Consensus 4 ~~~iiFDlDGTL~Ds 18 (220)
T COG0546 4 IKAILFDLDGTLVDS 18 (220)
T ss_pred CCEEEEeCCCccccC
Confidence 468999999999983
No 226
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=84.54 E-value=12 Score=42.08 Aligned_cols=73 Identities=15% Similarity=0.209 Sum_probs=48.5
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCC----cccc---CceEEECCC--C
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGA----GGMM---HEALLVNPY--E 460 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~----~~~l---~~~llvnP~--d 460 (808)
+.+.++++..+ ++..||++| ..-|+ -+..|++++++| +|+--..+- +..+ +.|+.+++. +
T Consensus 290 v~~~~~~p~~~---ll~~~d~~I---~hgG~-~t~~eal~~GvP----~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~ 358 (401)
T cd03784 290 VRVVDFVPHDW---LLPRCAAVV---HHGGA-GTTAAALRAGVP----QLVVPFFGDQPFWAARVAELGAGPALDPRELT 358 (401)
T ss_pred eEEeCCCCHHH---Hhhhhheee---ecCCc-hhHHHHHHcCCC----EEeeCCCCCcHHHHHHHHHCCCCCCCCcccCC
Confidence 34567777654 588899999 34554 678999999764 444443331 1111 226666655 6
Q ss_pred HHHHHHHHHHHhC
Q psy2719 461 IDAAANVLHRALC 473 (808)
Q Consensus 461 ~~~lA~ai~~~L~ 473 (808)
.+++++++.++|+
T Consensus 359 ~~~l~~al~~~l~ 371 (401)
T cd03784 359 AERLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHHHhC
Confidence 8999999999997
No 227
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=83.97 E-value=1 Score=46.17 Aligned_cols=16 Identities=31% Similarity=0.405 Sum_probs=13.3
Q ss_pred CceEEEEecccccccC
Q psy2719 542 CKLSLILDYDGTLTPL 557 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~ 557 (808)
.+++++||+||||++.
T Consensus 13 ~~k~iiFD~DGTL~~~ 28 (219)
T TIGR00338 13 SKKLVVFDMDSTLINA 28 (219)
T ss_pred cCCEEEEeCcccCCCc
Confidence 3568999999999983
No 228
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=83.60 E-value=1.3 Score=43.82 Aligned_cols=14 Identities=36% Similarity=0.392 Sum_probs=11.8
Q ss_pred eEEEEecccccccC
Q psy2719 544 LSLILDYDGTLTPL 557 (808)
Q Consensus 544 rli~~D~DGTLl~~ 557 (808)
+||+||+|+||.+.
T Consensus 4 klvvFDLD~TlW~~ 17 (169)
T PF12689_consen 4 KLVVFDLDYTLWPP 17 (169)
T ss_dssp SEEEE-STTTSSSS
T ss_pred cEEEEcCcCCCCch
Confidence 69999999999985
No 229
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=82.98 E-value=5.4 Score=44.11 Aligned_cols=139 Identities=12% Similarity=0.094 Sum_probs=76.7
Q ss_pred cCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHH
Q psy2719 323 TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELA 402 (808)
Q Consensus 323 ~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~ 402 (808)
..-++-.++|++++.+++|+++ +++-..+ +.|+.++.+... .-. . ....++ ...+..
T Consensus 203 ~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~---~~~-----~--~~~~~~----~~~~~~ 259 (381)
T COG0763 203 RRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEALK---WEV-----A--GLSLIL----IDGEKR 259 (381)
T ss_pred HHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHhh---ccc-----c--CceEEe----cCchHH
Confidence 4456777889999998999985 4432221 233333322111 100 0 011222 334566
Q ss_pred HHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCC-----------------CCccccCceEEEC-----CCC
Q psy2719 403 ALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFA-----------------GAGGMMHEALLVN-----PYE 460 (808)
Q Consensus 403 aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~-----------------G~~~~l~~~llvn-----P~d 460 (808)
..+.+||+.+..| |.+.+|++.+++| .|++=-. +....+-+-.+|+ -.-
T Consensus 260 ~a~~~aD~al~aS-----GT~tLE~aL~g~P----~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~ 330 (381)
T COG0763 260 KAFAAADAALAAS-----GTATLEAALAGTP----MVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCT 330 (381)
T ss_pred HHHHHhhHHHHhc-----cHHHHHHHHhCCC----EEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcC
Confidence 7899999999999 8999999999765 3333222 2222221212221 123
Q ss_pred HHHHHHHHHHHhCCCH--HHHHHHHHHHhHHHhcC
Q psy2719 461 IDAAANVLHRALCMPR--DERELRMSQLRHREQQL 493 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~--~e~~~r~~~~~~~v~~~ 493 (808)
++.+|+++..++..+. ++..+..+.+++++.+.
T Consensus 331 pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 331 PENLARALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred HHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 6789999998887652 12233344455555554
No 230
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=82.39 E-value=4.5 Score=48.75 Aligned_cols=53 Identities=15% Similarity=0.156 Sum_probs=40.9
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccC
Q psy2719 738 AKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN 804 (808)
Q Consensus 738 v~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~ 804 (808)
+.|. +|...++.+.++ | ..|+++| |.++++.++ .| ++|++ .+..|++|++++-
T Consensus 492 ~~Pe---dK~~~v~~lq~~--g------~~VamvGDG~NDapAL~~Ad-vG--iAm~~gt~~akeaadivLl 549 (675)
T TIGR01497 492 ATPE---DKIALIRQEQAE--G------KLVAMTGDGTNDAPALAQAD-VG--VAMNSGTQAAKEAANMVDL 549 (675)
T ss_pred CCHH---HHHHHHHHHHHc--C------CeEEEECCCcchHHHHHhCC-Ee--EEeCCCCHHHHHhCCEEEC
Confidence 4554 799998887553 2 1589999 999999994 44 99985 6778999999865
No 231
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=81.88 E-value=6.3 Score=50.56 Aligned_cols=56 Identities=5% Similarity=0.120 Sum_probs=40.7
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCC--ccccccccccCc
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSP--TVKSSWKQGSNH 805 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~--~vk~~A~~~~~~ 805 (808)
.+.|. .|+.-|+.+-+. .| .-|+++| |..|++.|. .| |.+.+.+ ..+.+|||++.+
T Consensus 750 R~sP~---qK~~IV~~lk~~-~~------~~vl~iGDG~ND~~mlk~Ad-VG--Igi~g~eg~qA~~aaD~~i~~ 811 (1057)
T TIGR01652 750 RVSPS---QKADVVRLVKKS-TG------KTTLAIGDGANDVSMIQEAD-VG--VGISGKEGMQAVMASDFAIGQ 811 (1057)
T ss_pred CCCHH---HHHHHHHHHHhc-CC------CeEEEEeCCCccHHHHhhcC-ee--eEecChHHHHHHHhhhhhhhh
Confidence 46665 899999876442 23 1589999 999999996 66 5665544 478899998763
No 232
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=81.60 E-value=1.6 Score=43.51 Aligned_cols=38 Identities=24% Similarity=0.166 Sum_probs=25.9
Q ss_pred ceEEEEecccccccCCC-C---CCccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTS-H---PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~-~---~~~~~i~~~~~~~L~~L~~~ 580 (808)
.+++|+|-||||.-..+ . +++-...+.++++|.+|++.
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~ 46 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRA 46 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhC
Confidence 56899999999976433 1 12234556777888877765
No 233
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=80.84 E-value=2.2 Score=42.77 Aligned_cols=15 Identities=47% Similarity=0.636 Sum_probs=12.2
Q ss_pred ceEEEEecccccccC
Q psy2719 543 KLSLILDYDGTLTPL 557 (808)
Q Consensus 543 ~rli~~D~DGTLl~~ 557 (808)
.++++||+||||++.
T Consensus 4 ~k~viFD~DGTLid~ 18 (201)
T TIGR01491 4 IKLIIFDLDGTLTDV 18 (201)
T ss_pred ceEEEEeCCCCCcCC
Confidence 357899999999973
No 234
>KOG3120|consensus
Probab=80.46 E-value=2.9 Score=42.48 Aligned_cols=20 Identities=25% Similarity=0.481 Sum_probs=16.6
Q ss_pred CCceEEEEecccccccCCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSH 560 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~ 560 (808)
+.|.|++||+|-|+++..++
T Consensus 11 ~~ril~~FDFD~TIid~dSD 30 (256)
T KOG3120|consen 11 SPRILLVFDFDRTIIDQDSD 30 (256)
T ss_pred CCcEEEEEecCceeecCCcc
Confidence 46789999999999986553
No 235
>PRK08238 hypothetical protein; Validated
Probab=79.40 E-value=3.1 Score=48.13 Aligned_cols=98 Identities=19% Similarity=0.179 Sum_probs=53.0
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCc----cccccccccc--cc--cCCCCc--ccchHHHHHHH
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVN----IGIISGRTLE--NL--RHHPDL--AVMSEETKRVL 613 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~----~~~~sgr~~~--~l--~~~~~~--~~~~~~~~~~l 613 (808)
+-+++|+||||+..+. ..+..... ++++|... .++..|+..- ++ +...+. ...-+..++.+
T Consensus 11 ~pl~~DlDgTLi~td~------l~e~~~~~---l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L 81 (479)
T PRK08238 11 LPLVVDLDGTLIRTDL------LHESIFAL---LRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYL 81 (479)
T ss_pred CCEEEeCCCCccccch------HHHHHHHH---HHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHH
Confidence 4578999999998321 22222222 33444222 2444555311 00 111111 12335677888
Q ss_pred HHHhCCCCCeEEEEeCCChhhHHHhcCccc--eEEEcccc
Q psy2719 614 ERLANMPDVNIGIISGRTLENLMKMVNIEK--VTYAGSHG 651 (808)
Q Consensus 614 ~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~--~~li~~nG 651 (808)
+++.+ .|.+++|+|+.+...++......+ ..+++.++
T Consensus 82 ~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 82 RAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred HHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 88754 589999999999887776553222 34555554
No 236
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=78.62 E-value=5.5 Score=50.68 Aligned_cols=57 Identities=14% Similarity=0.048 Sum_probs=42.9
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC--CCccccccccccCc
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS--SPTVKSSWKQGSNH 805 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~--~~~vk~~A~~~~~~ 805 (808)
+-.+.|. +|..-|+.+-+ .|. -|.++| |.+|++.+. .| ++||+ .+-.|++||+++.+
T Consensus 664 faR~sPe---qK~~IV~~lq~--~g~------vv~~~GDG~ND~paLk~Ad-VG--iamg~~G~~vak~aADivL~d 726 (997)
T TIGR01106 664 FARTSPQ---QKLIIVEGCQR--QGA------IVAVTGDGVNDSPALKKAD-IG--VAMGIAGSDVSKQAADMILLD 726 (997)
T ss_pred EEECCHH---HHHHHHHHHHH--CCC------EEEEECCCcccHHHHhhCC-cc--eecCCcccHHHHHhhceEEec
Confidence 3446665 89999887643 341 588999 999999995 56 88983 45588999998874
No 237
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=78.45 E-value=0.26 Score=47.68 Aligned_cols=77 Identities=14% Similarity=0.084 Sum_probs=31.2
Q ss_pred CCEEEEeccchHHHHHHHHhhcCCEEEeccHHHH-----------HHHHH----H----HHHHhC-ceeecCCeEEEEcC
Q psy2719 219 VPVVWIHDYQLLVAATTIRQVAYDFVGFHIEDYC-----------LNFID----C----CCRRLG-SRVDRNNMLVELAG 278 (808)
Q Consensus 219 ~dvvwihDyhl~llp~~lr~~~~dligf~~~~~~-----------~~fl~----~----~~~~l~-~~~~~~~~~i~~~g 278 (808)
.|+|++|.++...+.........-+..+|..... ..+.. . +++++. ++..++.+ .+++-
T Consensus 81 ~DiVh~~~~~~~~~~~~~~~~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l-~~~~~ 159 (177)
T PF13439_consen 81 PDIVHIHGPPAFWIALLACRKVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDEL-IKFGI 159 (177)
T ss_dssp -SEEECCTTHCCCHHHHHHHCSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHH-HHHT-
T ss_pred CCeEEecccchhHHHHHhccCCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHH-HHhCC
Confidence 7999999988765543321122445566665510 11111 0 111111 11111111 22233
Q ss_pred eEEEEEEeecCcCccccc
Q psy2719 279 RTVHVKALPIGIPFERFV 296 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~ 296 (808)
...++.++|||||+++|+
T Consensus 160 ~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 160 PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp -SS-EEE----B-CCCH-
T ss_pred cccCCEEEECCccHHHcC
Confidence 457899999999999884
No 238
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=78.20 E-value=2.2 Score=44.84 Aligned_cols=38 Identities=16% Similarity=0.281 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc
Q psy2719 194 EFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA 240 (808)
Q Consensus 194 ~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~ 240 (808)
.|+.++++.++.. . -..|||++||||..++|.+|+...
T Consensus 118 ~fs~a~le~~~~l-~--------~~pDIIH~hDW~tal~p~~lk~~~ 155 (245)
T PF08323_consen 118 FFSRAALELLKKL-G--------WKPDIIHCHDWHTALAPLYLKERY 155 (245)
T ss_dssp HHHHHHHHHHCTC-T---------S-SEEEEECGGGTTHHHHHHHCC
T ss_pred HHHHHHHHHHHhh-C--------CCCCEEEecCchHHHHHHHhcccc
Confidence 5677777776531 0 138999999999999999998753
No 239
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=78.17 E-value=2.8 Score=46.92 Aligned_cols=31 Identities=16% Similarity=0.333 Sum_probs=23.4
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
+++.|+.|.+ .|++++|+|+++...+...+.
T Consensus 221 a~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~ 251 (381)
T PLN02575 221 SQEFVNVLMN-YKIPMALVSTRPRKTLENAIG 251 (381)
T ss_pred HHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHH
Confidence 4566776654 489999999999887766654
No 240
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=78.05 E-value=6 Score=48.61 Aligned_cols=49 Identities=18% Similarity=0.239 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
+|...++.+.+. . .|+++| |.++++.++ .| ++|++ .+..++.||+++-+
T Consensus 617 ~K~~~v~~l~~~------~---~v~mvGDgiNDapAl~~A~-vg--ia~g~~~~~a~~~adivl~~ 670 (741)
T PRK11033 617 DKVKAVTELNQH------A---PLAMVGDGINDAPAMKAAS-IG--IAMGSGTDVALETADAALTH 670 (741)
T ss_pred HHHHHHHHHhcC------C---CEEEEECCHHhHHHHHhCC-ee--EEecCCCHHHHHhCCEEEec
Confidence 788877775321 1 589999 999999995 44 89985 56777889988753
No 241
>PLN02940 riboflavin kinase
Probab=77.96 E-value=1.4 Score=49.63 Aligned_cols=30 Identities=17% Similarity=0.331 Sum_probs=21.7
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.++|+.|.+ .|++++|+|+.+...+...+
T Consensus 98 v~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l 127 (382)
T PLN02940 98 ANRLIKHLKS-HGVPMALASNSPRANIEAKI 127 (382)
T ss_pred HHHHHHHHHH-CCCcEEEEeCCcHHHHHHHH
Confidence 4556766654 48999999999877665443
No 242
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=77.39 E-value=2.3 Score=41.18 Aligned_cols=16 Identities=50% Similarity=0.698 Sum_probs=12.3
Q ss_pred eEEEEecccccccCCC
Q psy2719 544 LSLILDYDGTLTPLTS 559 (808)
Q Consensus 544 rli~~D~DGTLl~~~~ 559 (808)
+++++|+||||+....
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 4789999999998544
No 243
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=75.45 E-value=10 Score=40.21 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=27.1
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
..+|+||+|-||...... .....+.+.+.|.+|++.
T Consensus 122 phVIVfDlD~TLItd~~~--v~Ir~~~v~~sL~~Lk~~ 157 (297)
T PF05152_consen 122 PHVIVFDLDSTLITDEGD--VRIRDPAVYDSLRELKEQ 157 (297)
T ss_pred CcEEEEECCCcccccCCc--cccCChHHHHHHHHHHHc
Confidence 458999999999985431 123457788999999887
No 244
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=75.23 E-value=1.6 Score=43.38 Aligned_cols=33 Identities=12% Similarity=0.014 Sum_probs=22.7
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhcc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQ 781 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~ 781 (808)
-+-.....++++ +|++++ ++++|| |++.=+.+|
T Consensus 143 P~p~~~~~~~~~-~~~~~~---~~l~igDs~~di~aA~~aG 179 (188)
T PRK10725 143 PAPDTFLRCAQL-MGVQPT---QCVVFEDADFGIQAARAAG 179 (188)
T ss_pred CChHHHHHHHHH-cCCCHH---HeEEEeccHhhHHHHHHCC
Confidence 345677888886 888764 799999 555555553
No 245
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=75.21 E-value=5 Score=44.00 Aligned_cols=30 Identities=23% Similarity=0.221 Sum_probs=23.9
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
.++||+||||... ..+-+...++|+.|...
T Consensus 2 ~~ifD~DGvL~~g------~~~i~ga~eal~~L~~~ 31 (321)
T TIGR01456 2 GFAFDIDGVLFRG------KKPIAGASDALRRLNRN 31 (321)
T ss_pred EEEEeCcCceECC------ccccHHHHHHHHHHhcc
Confidence 5799999999973 23467889999999874
No 246
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=74.57 E-value=7.5 Score=45.90 Aligned_cols=49 Identities=14% Similarity=0.104 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC-C-CCccccccccccC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD-S-SPTVKSSWKQGSN 804 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~-~-~~~vk~~A~~~~~ 804 (808)
+|...++++.++ . . .++++| |.+|++.++ ++++|+ + .+..+..||+++.
T Consensus 413 ~K~~~i~~l~~~-~----~---~v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~~ad~vl~ 467 (536)
T TIGR01512 413 DKLEIVKELREK-Y----G---PVAMVGDGINDAPALAAAD---VGIAMGASGSDVAIETADVVLL 467 (536)
T ss_pred HHHHHHHHHHhc-C----C---EEEEEeCCHHHHHHHHhCC---EEEEeCCCccHHHHHhCCEEEE
Confidence 677777776543 1 1 799999 999999995 458888 4 5677889998874
No 247
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=74.47 E-value=1.6 Score=44.08 Aligned_cols=23 Identities=17% Similarity=0.252 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEeC
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAGN 773 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~GD 773 (808)
-..+..++++ +|++.+ ++++|||
T Consensus 164 p~~~~~~~~~-~~~~~~---~~i~vGD 186 (197)
T TIGR01548 164 PEPLILAAKA-LGVEAC---HAAMVGD 186 (197)
T ss_pred HHHHHHHHHH-hCcCcc---cEEEEeC
Confidence 4456777776 788765 7999993
No 248
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=74.02 E-value=2.2 Score=43.14 Aligned_cols=34 Identities=9% Similarity=0.121 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEeCH--HHHHhccCCc
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAGNE--DAMLALQGIA 784 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~GD~--~Mf~~~~~~~ 784 (808)
....+.++++ +|++++ ++++|||- .-++++...|
T Consensus 163 ~~~~~~~~~~-~~~~~~---~~~~IgD~~~~Di~~A~~aG 198 (203)
T TIGR02252 163 PKIFQEALER-AGISPE---EALHIGDSLRNDYQGARAAG 198 (203)
T ss_pred HHHHHHHHHH-cCCChh---HEEEECCCchHHHHHHHHcC
Confidence 3467778886 788865 79999942 2355554334
No 249
>KOG3742|consensus
Probab=73.98 E-value=3.6 Score=45.80 Aligned_cols=70 Identities=10% Similarity=0.152 Sum_probs=49.3
Q ss_pred HHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----C----ceE-EECC------CCHHHH
Q psy2719 400 ELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----H----EAL-LVNP------YEIDAA 464 (808)
Q Consensus 400 el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~----~~l-lvnP------~d~~~l 464 (808)
++..+-|.|.+.|+||.||++|.++.|....+ -|-|.+..+|..--+ . -|+ +|+- ..++++
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMG----iPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEec----cccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 45567899999999999999999999988774 456777777754333 1 144 4432 245667
Q ss_pred HHHHHHHhC
Q psy2719 465 ANVLHRALC 473 (808)
Q Consensus 465 A~ai~~~L~ 473 (808)
++-|.....
T Consensus 569 ~~~m~~F~~ 577 (692)
T KOG3742|consen 569 ASFMYEFCK 577 (692)
T ss_pred HHHHHHHHH
Confidence 777766653
No 250
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=73.85 E-value=5.1 Score=39.57 Aligned_cols=90 Identities=19% Similarity=0.197 Sum_probs=43.8
Q ss_pred CceEEEEecccccccCCCCC--CccCCCHHHHHHHHHHhcCCCCccccc--cccccccccCCCCcccchHHHHHHHH---
Q psy2719 542 CKLSLILDYDGTLTPLTSHP--DLAVMSEETKRVLERLANMPDVNIGII--SGRTLENLRHHPDLAVMSEETKRVLE--- 614 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~--~~~~i~~~~~~~L~~L~~~~~~~~~~~--sgr~~~~l~~~~~~~~~~~~~~~~l~--- 614 (808)
++..|+.|+|||++-..... .+..-+++.+..-+....+ .+.+. =||+++++.. .. .|-+.-+++
T Consensus 2 kk~vi~sDFDGTITl~Ds~~~itdtf~~~e~k~l~~~vls~---tiS~rd~~g~mf~~i~~--s~---~Eile~llk~i~ 73 (220)
T COG4359 2 KKPVIFSDFDGTITLNDSNDYITDTFGPGEWKALKDGVLSK---TISFRDGFGRMFGSIHS--SL---EEILEFLLKDIK 73 (220)
T ss_pred CceEEEecCCCceEecchhHHHHhccCchHHHHHHHHHhhC---ceeHHHHHHHHHHhcCC--CH---HHHHHHHHhhcc
Confidence 35689999999998543221 1123344555333333333 11111 1344444311 11 111222222
Q ss_pred ---------HHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 615 ---------RLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 615 ---------~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.|...++.|+++|+-.-..+...|
T Consensus 74 Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lf 107 (220)
T COG4359 74 IDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLF 107 (220)
T ss_pred cCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHH
Confidence 2344557889999888766655554
No 251
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=72.56 E-value=2.3 Score=44.40 Aligned_cols=41 Identities=7% Similarity=0.052 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEeCH--HHHHhccCCcc-EEEeC
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAGNE--DAMLALQGIAC-TFRVD 790 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~GD~--~Mf~~~~~~~~-~vav~ 790 (808)
+......++++ +|++++ +++++||- .-+.++...|+ ++.+.
T Consensus 165 ~p~~~~~a~~~-~~~~~~---~~~~VGD~~~~Di~~A~~aG~~~i~v~ 208 (238)
T PRK10748 165 FSDMYHLAAEK-LNVPIG---EILHVGDDLTTDVAGAIRCGMQACWIN 208 (238)
T ss_pred cHHHHHHHHHH-cCCChh---HEEEEcCCcHHHHHHHHHCCCeEEEEc
Confidence 45566777775 788765 79999942 33444443443 45554
No 252
>PRK11587 putative phosphatase; Provisional
Probab=70.79 E-value=2.1 Score=43.88 Aligned_cols=53 Identities=9% Similarity=-0.073 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC--CccccccccccCc
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS--PTVKSSWKQGSNH 805 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~--~~vk~~A~~~~~~ 805 (808)
.......+++ +|++++ ++++|| |+.+=+.+| . .+++|... ..-...|+++.++
T Consensus 141 p~~~~~~~~~-~g~~p~---~~l~igDs~~di~aA~~aG-~-~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 141 PDAYLLGAQL-LGLAPQ---ECVVVEDAPAGVLSGLAAG-C-HVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred cHHHHHHHHH-cCCCcc---cEEEEecchhhhHHHHHCC-C-EEEEECCCCchhhhccCCEEecc
Confidence 4566666775 898875 799999 655555553 2 25667642 1122346665543
No 253
>PHA02597 30.2 hypothetical protein; Provisional
Probab=70.76 E-value=2.1 Score=43.09 Aligned_cols=14 Identities=29% Similarity=0.496 Sum_probs=12.4
Q ss_pred eEEEEecccccccC
Q psy2719 544 LSLILDYDGTLTPL 557 (808)
Q Consensus 544 rli~~D~DGTLl~~ 557 (808)
++|+||+||||++.
T Consensus 3 k~viFDlDGTLiD~ 16 (197)
T PHA02597 3 PTILTDVDGVLLSW 16 (197)
T ss_pred cEEEEecCCceEch
Confidence 57999999999983
No 254
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=70.68 E-value=32 Score=40.05 Aligned_cols=111 Identities=18% Similarity=0.191 Sum_probs=79.5
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
++..++++..+ +.|=.++.+.-.-++++.-|+- +|++-+.+ +..+....++.++++-+. +...
T Consensus 428 ~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~------~~~~~~~~l~~la~~~Gv-----~~eR 490 (620)
T COG3914 428 EDAVVFCCFNN--YFKITPEVFALWMQILSAVPNS----VLLLKAGG------DDAEINARLRDLAEREGV-----DSER 490 (620)
T ss_pred CCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCc----EEEEecCC------CcHHHHHHHHHHHHHcCC-----Chhh
Confidence 34556666666 5788899999999999999985 45555543 123466677777766432 3345
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCC
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPF 443 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~ 443 (808)
++| .+..+.++..+-|+.||+++-|=-|-| ..++.|++-+ |++|++..
T Consensus 491 L~f-~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm-----~vPVlT~~ 538 (620)
T COG3914 491 LRF-LPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM-----GVPVLTRV 538 (620)
T ss_pred eee-cCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh-----cCceeeec
Confidence 554 567788899999999999998877766 5789999998 45666654
No 255
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=70.45 E-value=4.5 Score=42.96 Aligned_cols=54 Identities=13% Similarity=-0.073 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC--CCccccccccccCc
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS--SPTVKSSWKQGSNH 805 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~--~~~vk~~A~~~~~~ 805 (808)
+-.....++++ +|++++ ++++|| |+.+=+.+| + .++++.+ .......|+++..+
T Consensus 167 ~Pe~~~~a~~~-l~~~p~---~~l~IgDs~~Di~aA~~aG-~-~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 167 DPEMFMYAAER-LGFIPE---RCIVFGNSNSSVEAAHDGC-M-KCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred CHHHHHHHHHH-hCCChH---HeEEEcCCHHHHHHHHHcC-C-EEEEEecCCchhhhccCCEEeCC
Confidence 34567777776 898865 799999 555555554 2 1345542 22222346766543
No 256
>KOG1615|consensus
Probab=70.43 E-value=7.1 Score=38.97 Aligned_cols=21 Identities=19% Similarity=0.213 Sum_probs=15.6
Q ss_pred HhhhhcCCCceEEEEeccccccc
Q psy2719 534 LNNYVDGNCKLSLILDYDGTLTP 556 (808)
Q Consensus 534 ~~~y~~~~~~rli~~D~DGTLl~ 556 (808)
++++.+ +..+++||+|-|+..
T Consensus 9 ~~~~~~--~~~aVcFDvDSTvi~ 29 (227)
T KOG1615|consen 9 LAKLWR--SADAVCFDVDSTVIQ 29 (227)
T ss_pred HHHHHH--hcCeEEEecCcchhH
Confidence 455554 245899999999986
No 257
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=70.35 E-value=4.7 Score=41.20 Aligned_cols=41 Identities=12% Similarity=0.253 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEeCH--HHHHhccCCcc-EEEeC
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAGNE--DAMLALQGIAC-TFRVD 790 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~GD~--~Mf~~~~~~~~-~vav~ 790 (808)
+....+.++++ +|++++ ++++|||- .-++++...|+ ++.+.
T Consensus 152 ~~~~~~~~~~~-~~~~~~---~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKR-LGVKPE---EAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHH-cCCChh---hEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 34567788886 898865 79999952 24444443443 45565
No 258
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=70.16 E-value=2.2 Score=42.23 Aligned_cols=32 Identities=13% Similarity=-0.003 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhcc
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQ 781 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~ 781 (808)
+....+.++++ ++++++ ++++|| |+++=+.+|
T Consensus 144 ~~~~~~~~~~~-~~~~~~---~~v~IgD~~~di~aA~~~G 179 (185)
T TIGR02009 144 HPETFLLAAEL-LGVSPN---ECVVFEDALAGVQAARAAG 179 (185)
T ss_pred ChHHHHHHHHH-cCCCHH---HeEEEeCcHhhHHHHHHCC
Confidence 34466777876 788764 799999 666666664
No 259
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=70.06 E-value=19 Score=45.33 Aligned_cols=54 Identities=13% Similarity=0.177 Sum_probs=39.5
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC-C-CCccccccccccC
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD-S-SPTVKSSWKQGSN 804 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~-~-~~~vk~~A~~~~~ 804 (808)
.+.|. +|...++.+-+ .| + .|.++| |.+|++.++ .| ++|| + .+-.|++||+++-
T Consensus 600 r~~P~---~K~~iv~~lq~--~g---~---~v~mvGDGvND~pAl~~Ad-VG--ia~g~~g~~va~~aaDivl~ 659 (884)
T TIGR01522 600 RASPE---HKMKIVKALQK--RG---D---VVAMTGDGVNDAPALKLAD-IG--VAMGQTGTDVAKEAADMILT 659 (884)
T ss_pred ECCHH---HHHHHHHHHHH--CC---C---EEEEECCCcccHHHHHhCC-ee--EecCCCcCHHHHHhcCEEEc
Confidence 45554 89888776543 33 1 689999 999999995 55 8897 3 4556789999885
No 260
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=69.06 E-value=2.7 Score=44.22 Aligned_cols=54 Identities=7% Similarity=-0.042 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC--CC-Ccc-ccccccccCc
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD--SS-PTV-KSSWKQGSNH 805 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~--~~-~~v-k~~A~~~~~~ 805 (808)
+......++++ +|++++ ++++|| |+.+=+.+| + .++.+. +. +++ +..|+++..+
T Consensus 166 ~p~~~~~a~~~-~~~~~~---~~l~vgDs~~Di~aA~~aG-i-~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 166 HPDPYLKALEV-LKVSKD---HTFVFEDSVSGIKAGVAAG-M-PVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred ChHHHHHHHHH-hCCChh---HEEEEcCCHHHHHHHHHCC-C-EEEEEeCCCCHHHHhhcCCCEEecc
Confidence 44567777876 788764 799999 666666664 2 245554 22 222 3356666554
No 261
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=68.79 E-value=10 Score=47.92 Aligned_cols=57 Identities=14% Similarity=0.161 Sum_probs=43.9
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC-C-CCccccccccccCc
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD-S-SPTVKSSWKQGSNH 805 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~-~-~~~vk~~A~~~~~~ 805 (808)
+-.+.|. +|...|+.+-+. | .-|.+.| |.+|++.+. .| +||+ + .+-.|++||+++.+
T Consensus 649 far~sPe---~K~~iV~~lq~~--g------~vVam~GDGvNDapALk~Ad-VG--IAmg~~gtdvAk~aADivL~d 711 (941)
T TIGR01517 649 LARSSPL---DKQLLVLMLKDM--G------EVVAVTGDGTNDAPALKLAD-VG--FSMGISGTEVAKEASDIILLD 711 (941)
T ss_pred EEECCHH---HHHHHHHHHHHC--C------CEEEEECCCCchHHHHHhCC-cc--eecCCCccHHHHHhCCEEEec
Confidence 3457775 899999986542 3 1588899 999999995 66 8898 4 56688999998864
No 262
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=67.40 E-value=12 Score=36.50 Aligned_cols=33 Identities=6% Similarity=-0.023 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 606 SEETKRVLERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 606 ~~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
-+.+.+.|+.|+. +..++|+|..+.......+.
T Consensus 60 rPgv~efL~~l~~--~yel~I~T~~~~~yA~~vl~ 92 (156)
T TIGR02250 60 RPFLHEFLKEASK--LYEMHVYTMGTRAYAQAIAK 92 (156)
T ss_pred CCCHHHHHHHHHh--hcEEEEEeCCcHHHHHHHHH
Confidence 3457788888874 68999999888776655553
No 263
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=67.37 E-value=3.5 Score=42.20 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhcCCC-CCcceeEEEEe----CHHHHHhcc
Q psy2719 746 QGRASIHILRTMYGVD-WSERVRIIYAG----NEDAMLALQ 781 (808)
Q Consensus 746 KG~av~~ll~~~~~i~-~~~~~~via~G----D~~Mf~~~~ 781 (808)
+......++++ +|++ ++ ++++|| |+.+-+.+|
T Consensus 147 ~p~~~~~a~~~-~~~~~~~---~~~~igD~~~Di~aa~~aG 183 (220)
T TIGR03351 147 APDLILRAMEL-TGVQDVQ---SVAVAGDTPNDLEAGINAG 183 (220)
T ss_pred CHHHHHHHHHH-cCCCChh---HeEEeCCCHHHHHHHHHCC
Confidence 55778888886 7886 34 799999 777777775
No 264
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=67.08 E-value=3.3 Score=44.60 Aligned_cols=53 Identities=19% Similarity=-0.010 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC---CCccccccccccCc
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS---SPTVKSSWKQGSNH 805 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~---~~~vk~~A~~~~~~ 805 (808)
......++++ +|++++ ++++|| |+++-+.+| +. ++.|.. .++....|+++.++
T Consensus 205 p~~~~~a~~~-~~~~p~---~~l~IGDs~~Di~aA~~aG-~~-~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 205 PDIYNLAAET-LGVDPS---RCVVVEDSVIGLQAAKAAG-MR-CIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHH-hCcChH---HEEEEeCCHHhHHHHHHcC-CE-EEEEccCCccccccCCCcEEECC
Confidence 4577778886 788865 799999 777777765 22 455532 22222457776654
No 265
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=66.93 E-value=11 Score=38.24 Aligned_cols=40 Identities=25% Similarity=0.145 Sum_probs=23.0
Q ss_pred CCceEEEEecccccccCCCCCC--ccCCCHHHHHHHHHHhcC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPD--LAVMSEETKRVLERLANM 580 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~--~~~i~~~~~~~L~~L~~~ 580 (808)
.+++++++|+|+||+....... ....-|-+.+.|+.+.+.
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~ 60 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYED 60 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhC
Confidence 4567999999999997532110 112234455555555443
No 266
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=66.77 E-value=4.5 Score=40.10 Aligned_cols=23 Identities=35% Similarity=0.361 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEe
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAG 772 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~G 772 (808)
+-...+.++++ +|++++ ++++||
T Consensus 143 ~p~~~~~~~~~-~~~~~~---~~l~vg 165 (184)
T TIGR01993 143 SPQAYEKALRE-AGVDPE---RAIFFD 165 (184)
T ss_pred CHHHHHHHHHH-hCCCcc---ceEEEe
Confidence 34577788886 788875 799999
No 267
>PRK14986 glycogen phosphorylase; Provisional
Probab=66.76 E-value=96 Score=38.19 Aligned_cols=150 Identities=9% Similarity=0.095 Sum_probs=96.8
Q ss_pred CCCeEEEEEcCccccCChHH-HHHHHHHHH--HhCCCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVH-RIKAFERLL--EKHPEYV-EKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~-~l~A~~~ll--~~~p~~~-~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
++..+++.+-|+..-|-... +|..+.++. .++|+.. ..+++|..|.+.+++... .++-+.|..++.-||..=...
T Consensus 541 p~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIk~I~~va~~in~Dp~v~ 619 (815)
T PRK14986 541 PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMA-KHIIHLINDVAKVINNDPQIG 619 (815)
T ss_pred cccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhccChhhc
Confidence 45677888999999998888 777766653 4566522 246777777666555432 356667777777777532222
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC------ceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH------EALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~------~~llv 456 (808)
+.-.|+|+... .-.--..++.+|||-..+|. .|.=|..-+=||. .|++-+|..-|+..++. +++++
T Consensus 620 ~~lkVVFlenY-~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~al-----NGaLtlgtlDG~nvEi~e~vG~eN~~~f 693 (815)
T PRK14986 620 DKLKVVFIPNY-SVSLAQLIIPAADLSEQISLAGTEASGTSNMKFAL-----NGALTIGTLDGANVEMLEHVGEENIFIF 693 (815)
T ss_pred CceeEEEeCCC-CHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHh-----cCceeeeccCCchhHHHHhcCCCcEEEe
Confidence 33357777543 33444568999999888886 3544444444443 58899999999866652 47777
Q ss_pred CCCCHHHHHH
Q psy2719 457 NPYEIDAAAN 466 (808)
Q Consensus 457 nP~d~~~lA~ 466 (808)
-. ..+++++
T Consensus 694 G~-~~~ev~~ 702 (815)
T PRK14986 694 GN-TAEEVEA 702 (815)
T ss_pred CC-CHHHHHH
Confidence 44 5666554
No 268
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.56 E-value=23 Score=39.16 Aligned_cols=107 Identities=13% Similarity=0.171 Sum_probs=70.6
Q ss_pred CHHHHHHHHHhcCeEEECCC---CCC---CChhHHHHHHhccCCCceEEEcCCCCCccccCc--eEEECCCCHHHHHHHH
Q psy2719 397 GQEELAALYRDSAIALVTPL---RDG---MNLVAKEYVACQIREPGVLILSPFAGAGGMMHE--ALLVNPYEIDAAANVL 468 (808)
Q Consensus 397 ~~~el~aly~~Adv~v~~S~---~EG---~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~~--~llvnP~d~~~lA~ai 468 (808)
+...++..++.-|+.+.=+. -++ ++.-+.|+++|+ |+++.+-..++-.-+.. .+++ -.|..++.+.|
T Consensus 247 ~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~----~~liT~~~~~~e~~f~pgk~~iv-~~d~kdl~~~~ 321 (373)
T COG4641 247 PKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG----GFLITDYWKDLEKFFKPGKDIIV-YQDSKDLKEKL 321 (373)
T ss_pred ccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC----CccccccHHHHHHhcCCchheEE-ecCHHHHHHHH
Confidence 33555666666666553332 222 488899999994 66666665555544542 3444 57999999999
Q ss_pred HHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHcc
Q psy2719 469 HRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 469 ~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 509 (808)
..++.- ++||++..+.+.++| ..|+...=+..++..+..+
T Consensus 322 ~yll~h-~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 322 KYLLNH-PDERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred HHHhcC-cchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 999985 456777777665555 4677777777777777653
No 269
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=66.37 E-value=1.5e+02 Score=35.98 Aligned_cols=149 Identities=12% Similarity=0.135 Sum_probs=84.9
Q ss_pred CCCeEEEEEcCccccCChHHH-H---HHHHHHHHhCCCccC-cEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVHR-I---KAFERLLEKHPEYVE-KVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSK 383 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~-l---~A~~~ll~~~p~~~~-~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~ 383 (808)
++..+++.+-|+..-|-.... | .-+.++ ++.|+... .+++|..|...+++... +++-+.|.+++..||..-..
T Consensus 442 p~slfdv~~rR~heYKRq~LniL~ii~~y~ri-k~~p~~~~~Pv~~IFaGKAhP~d~~g-K~iIk~I~~va~~in~Dp~v 519 (713)
T PF00343_consen 442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRI-KNNPNKKIRPVQFIFAGKAHPGDYMG-KEIIKLINNVAEVINNDPEV 519 (713)
T ss_dssp TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHH-HHSTTSCCS-EEEEEE----TT-HHH-HHHHHHHHHHHHHHCT-TTT
T ss_pred cchhhhhhhhhcccccccCcccccHHHHHHHH-HhcccCCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHHhcChhh
Confidence 456778899999999987773 3 334454 34565332 36667666544444322 34556666677677753212
Q ss_pred CCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----C--ceEE
Q psy2719 384 PNWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----H--EALL 455 (808)
Q Consensus 384 ~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~--~~ll 455 (808)
.+.-.|+|+. ..+-.--..++.+|||-+.+|. .|.=|..-+=||.- |++.+|..-|+.-++ + +.++
T Consensus 520 ~~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N-----GaL~lstlDG~niEi~e~vG~eN~fi 593 (713)
T PF00343_consen 520 GDRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN-----GALNLSTLDGWNIEIAEAVGEENIFI 593 (713)
T ss_dssp CCGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT-----T-EEEEESSTCHHHHHHHH-GGGSEE
T ss_pred ccceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC-----CCeEEecccchhHHHHHhcCCCcEEE
Confidence 2223577664 4455555678999999999997 58888887777764 789999999986655 2 3566
Q ss_pred ECCCCHHHHHH
Q psy2719 456 VNPYEIDAAAN 466 (808)
Q Consensus 456 vnP~d~~~lA~ 466 (808)
+ -.+.+++.+
T Consensus 594 F-G~~~~ev~~ 603 (713)
T PF00343_consen 594 F-GLTAEEVEE 603 (713)
T ss_dssp E-S-BHHHHHH
T ss_pred c-CCCHHHHHH
Confidence 6 345555543
No 270
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=66.27 E-value=3.3 Score=42.41 Aligned_cols=24 Identities=8% Similarity=-0.027 Sum_probs=18.3
Q ss_pred eEEEEe----CHHHHHhccCCccEEEeCCCC
Q psy2719 767 RIIYAG----NEDAMLALQGIACTFRVDSSP 793 (808)
Q Consensus 767 ~via~G----D~~Mf~~~~~~~~~vav~~~~ 793 (808)
...|.| |.+||+.++ .+ ++|.-.+
T Consensus 177 ~~~aYsDS~~D~pmL~~a~-~~--~~Vnp~~ 204 (210)
T TIGR01545 177 LYSGYSDSKQDNPLLAFCE-HR--WRVSKRG 204 (210)
T ss_pred heEEecCCcccHHHHHhCC-Cc--EEECcch
Confidence 467889 999999996 34 7776443
No 271
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=66.23 E-value=2.9 Score=43.29 Aligned_cols=42 Identities=14% Similarity=0.181 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEeC-HHHHHhccCCcc--EEEeCC
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAGN-EDAMLALQGIAC--TFRVDS 791 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~GD-~~Mf~~~~~~~~--~vav~~ 791 (808)
+-...+.++++ +|++++ ++++||| ..-++++...|+ .++|.+
T Consensus 151 ~p~~~~~~~~~-~~~~p~---~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 151 DQRLWQAVAEH-TGLKAE---RTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred CHHHHHHHHHH-cCCChH---HEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 35567778886 898875 7999993 122444443444 355664
No 272
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=66.08 E-value=2.2e+02 Score=31.74 Aligned_cols=55 Identities=15% Similarity=0.176 Sum_probs=36.6
Q ss_pred EEcc--CeEEEEeCCCCCCHHHHHHHHHHHhc----CCCCCcceeEEEEeCHHHHHhcc-------CCccEEEeCCCCc
Q psy2719 729 PHNA--LMAIEAKPPVKWDQGRASIHILRTMY----GVDWSERVRIIYAGNEDAMLALQ-------GIACTFRVDSSPT 794 (808)
Q Consensus 729 v~~g--~~~vEv~p~~~v~KG~av~~ll~~~~----~i~~~~~~~via~GD~~Mf~~~~-------~~~~~vav~~~~~ 794 (808)
...| +-|+|| -||.-||+.+.+. + +|..+ +++-+||- |-.+| -.++++-++|+.|
T Consensus 336 AFNGGsDVwVDI-----GdKs~GV~~lQ~y-~~~~~~i~~~---~tLHVGDQ--F~s~GaNDfkaR~a~~t~WIasP~E 403 (408)
T PF06437_consen 336 AFNGGSDVWVDI-----GDKSLGVRALQKY-FDPEGGIKPS---ETLHVGDQ--FLSAGANDFKARLACTTAWIASPQE 403 (408)
T ss_pred eecCCcceEEEc-----CCcHHhHHHHHHH-HHhccCCCcc---ceeeehhh--hhccCCcchhhhhhceeeEecCHHH
Confidence 3444 357785 2789999987764 7 88876 79999952 33332 2357788888644
No 273
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=65.96 E-value=39 Score=38.53 Aligned_cols=33 Identities=9% Similarity=0.044 Sum_probs=25.3
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCc
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEY 343 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~ 343 (808)
+-+++.|-+-.|--+....+.+...|-+-.|+.
T Consensus 44 rgll~~v~~~~Y~~~aq~i~~~~s~~~~~~pd~ 76 (574)
T COG3882 44 RGLLVNVHEAGYGGWAQFIFSPKSCFERFRPDA 76 (574)
T ss_pred cceeEEeeecccchhHHHHcChHhHHhccCCce
Confidence 347888888888888888888887776666763
No 274
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=65.87 E-value=11 Score=36.91 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=19.0
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.+.|+.|.. ...++|.|.-+.......+
T Consensus 47 l~eFL~~l~~--~yei~I~Ts~~~~yA~~il 75 (162)
T TIGR02251 47 VDEFLERVSK--WYELVIFTASLEEYADPVL 75 (162)
T ss_pred HHHHHHHHHh--cCEEEEEcCCcHHHHHHHH
Confidence 4566666654 3788888877766555544
No 275
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=65.71 E-value=12 Score=38.18 Aligned_cols=53 Identities=9% Similarity=0.118 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCc-cEEEeCCCCccccccc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIA-CTFRVDSSPTVKSSWK 800 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~-~~vav~~~~~vk~~A~ 800 (808)
|--|+..++.+++- -+++. .++|+| |.+||+++++.| ++|+-.+.+.....|+
T Consensus 189 gg~ka~i~e~~~el-e~~d~----sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal~eAd 246 (315)
T COG4030 189 GGEKAKIMEGYCEL-EGIDF----SAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYALKEAD 246 (315)
T ss_pred CcchhHHHHHHHhh-cCCCc----ceeEecCcccchHHHHHhhccCceEEEecCCcccccccc
Confidence 55566666666663 57665 479999 999999998765 5555553443333344
No 276
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=65.21 E-value=39 Score=42.62 Aligned_cols=57 Identities=18% Similarity=0.153 Sum_probs=43.7
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
+-.+.|. +|-..|+.+-+ .|. -|...| |.++++.+. .| +||++ .+-.|++||.++-+
T Consensus 618 fAr~sPe---~K~~IV~~Lq~--~G~------vVam~GDGvNDaPALk~AD-VG--IAmg~gtdvAkeaADiVLld 679 (902)
T PRK10517 618 FARLTPM---HKERIVTLLKR--EGH------VVGFMGDGINDAPALRAAD-IG--ISVDGAVDIAREAADIILLE 679 (902)
T ss_pred EEEcCHH---HHHHHHHHHHH--CCC------EEEEECCCcchHHHHHhCC-EE--EEeCCcCHHHHHhCCEEEec
Confidence 4567775 99999998654 231 478889 999999995 56 88885 56689999998753
No 277
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=64.87 E-value=29 Score=42.87 Aligned_cols=57 Identities=12% Similarity=0.093 Sum_probs=43.6
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
+-++.|. +|-.-|+.+-+ .| .-|...| |.++++.+. .| ++|++ .+-.|++||.++-+
T Consensus 515 fAr~~Pe---~K~~iV~~lq~--~G------~~VamvGDGvNDapAL~~Ad-VG--IAm~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 515 FAEVFPE---HKYEIVEILQK--RG------HLVGMTGDGVNDAPALKKAD-VG--IAVAGATDAARSAADIVLTE 576 (755)
T ss_pred EEecCHH---HHHHHHHHHHh--cC------CEEEEEcCCcccHHHHHhCC-ee--EEecCCcHHHHHhCCEEEEc
Confidence 4567775 89999998644 23 1588889 999999995 56 88885 56688999988753
No 278
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=64.71 E-value=4.3 Score=40.08 Aligned_cols=33 Identities=18% Similarity=0.038 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhcc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQ 781 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~ 781 (808)
-+-...+.++++ ++++++ ++++|| |+.+-+.+|
T Consensus 142 p~p~~~~~~~~~-~~~~~~---~~v~vgD~~~di~aA~~aG 178 (185)
T TIGR01990 142 PDPEIFLAAAEG-LGVSPS---ECIGIEDAQAGIEAIKAAG 178 (185)
T ss_pred CChHHHHHHHHH-cCCCHH---HeEEEecCHHHHHHHHHcC
Confidence 355667778886 788764 799999 555555553
No 279
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=64.46 E-value=83 Score=36.90 Aligned_cols=101 Identities=9% Similarity=0.113 Sum_probs=59.6
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---------CceEEECC--
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---------HEALLVNP-- 458 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---------~~~llvnP-- 458 (808)
+++.+.+|+.++.+- ..+++||.- -| ..+..||+.+++| +|+--..+ ++. +-|+.+++
T Consensus 348 v~i~~w~Pq~~lL~h-p~v~~fItH---GG-~~s~~Eal~~GvP----~v~iP~~~--DQ~~Na~rv~~~G~G~~l~~~~ 416 (507)
T PHA03392 348 VLTQKWFPQRAVLKH-KNVKAFVTQ---GG-VQSTDEAIDALVP----MVGLPMMG--DQFYNTNKYVELGIGRALDTVT 416 (507)
T ss_pred eEEecCCCHHHHhcC-CCCCEEEec---CC-cccHHHHHHcCCC----EEECCCCc--cHHHHHHHHHHcCcEEEeccCC
Confidence 455688898776332 567888742 45 4577999999754 44333222 222 13777765
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC------CHHHHHHHHH
Q psy2719 459 YEIDAAANVLHRALCMPRDERELRMSQLRHREQQL------DVNHWMNSFL 503 (808)
Q Consensus 459 ~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~------~~~~W~~~~l 503 (808)
.+.+++++||.++|+.+ .-+++.++..+.++.. .+-+|++..+
T Consensus 417 ~t~~~l~~ai~~vl~~~--~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 417 VSAAQLVLAIVDVIENP--KYRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred cCHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 46789999999999853 2333333333333322 3456766543
No 280
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=64.01 E-value=3.3 Score=42.90 Aligned_cols=54 Identities=11% Similarity=-0.066 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC-C---CC-cc-ccccccccCc
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD-S---SP-TV-KSSWKQGSNH 805 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~-~---~~-~v-k~~A~~~~~~ 805 (808)
+...+..++++ +|++++ ++++|| |+.|-+.+|-. ++++. + .+ .. ...|+|+.++
T Consensus 153 ~p~~~~~~~~~-l~~~p~---~~l~IGDs~~Di~aA~~aG~~--~i~v~~g~~~~~~~~~~~~~~~~i~~ 216 (229)
T PRK13226 153 HPLPLLVAAER-IGVAPT---DCVYVGDDERDILAARAAGMP--SVAALWGYRLHDDDPLAWQADVLVEQ 216 (229)
T ss_pred CHHHHHHHHHH-hCCChh---hEEEeCCCHHHHHHHHHCCCc--EEEEeecCCCCCcChhhcCCCeeeCC
Confidence 44567888886 898875 799999 88888888622 34443 1 22 22 2347776653
No 281
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=63.01 E-value=4.3 Score=41.42 Aligned_cols=41 Identities=10% Similarity=0.052 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhc-CCCCCcceeEEEEeC--HHHHHhccCCcc-EEEeC
Q psy2719 746 QGRASIHILRTMY-GVDWSERVRIIYAGN--EDAMLALQGIAC-TFRVD 790 (808)
Q Consensus 746 KG~av~~ll~~~~-~i~~~~~~~via~GD--~~Mf~~~~~~~~-~vav~ 790 (808)
+....+.++++ + |++++ ++++||| ..-++++...|+ ++.+.
T Consensus 154 ~~~~~~~~~~~-~~~~~~~---~~v~igD~~~~di~~A~~~G~~~i~~~ 198 (224)
T TIGR02254 154 DKEIFNYALER-MPKFSKE---EVLMIGDSLTADIKGGQNAGLDTCWMN 198 (224)
T ss_pred CHHHHHHHHHH-hcCCCch---heEEECCCcHHHHHHHHHCCCcEEEEC
Confidence 44567777876 7 88865 7999995 224444443443 34443
No 282
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=62.17 E-value=26 Score=42.50 Aligned_cols=55 Identities=16% Similarity=0.171 Sum_probs=40.9
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
++.|. +|-..|+.+-++ | .-|...| |.++++.+. .| +||++ .+-.|++||.++-+
T Consensus 490 ~~~Pe---dK~~iV~~lQ~~--G------~~VaMtGDGvNDAPALa~AD-VG--IAMgsGTdvAkeAADiVLld 549 (679)
T PRK01122 490 EATPE---DKLALIRQEQAE--G------RLVAMTGDGTNDAPALAQAD-VG--VAMNSGTQAAKEAGNMVDLD 549 (679)
T ss_pred cCCHH---HHHHHHHHHHHc--C------CeEEEECCCcchHHHHHhCC-Ee--EEeCCCCHHHHHhCCEEEeC
Confidence 44554 788888876542 3 1478889 999999995 55 99995 57789999988753
No 283
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=62.03 E-value=4.2 Score=42.69 Aligned_cols=38 Identities=11% Similarity=0.010 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcCCC-CCcceeEEEEe----CHHHHHhccCCccEEEeC
Q psy2719 747 GRASIHILRTMYGVD-WSERVRIIYAG----NEDAMLALQGIACTFRVD 790 (808)
Q Consensus 747 G~av~~ll~~~~~i~-~~~~~~via~G----D~~Mf~~~~~~~~~vav~ 790 (808)
-......+++ +|+. ++ ++++|| |+.+=+.+| + .+++|.
T Consensus 159 p~~~~~a~~~-l~~~~~~---~~l~IGDs~~Di~aA~~aG-i-~~i~v~ 201 (253)
T TIGR01422 159 PWMALKNAIE-LGVYDVA---ACVKVGDTVPDIEEGRNAG-M-WTVGLI 201 (253)
T ss_pred HHHHHHHHHH-cCCCCch---heEEECCcHHHHHHHHHCC-C-eEEEEe
Confidence 3456667775 7874 44 799999 666666664 2 245554
No 284
>PLN03190 aminophospholipid translocase; Provisional
Probab=61.51 E-value=72 Score=41.44 Aligned_cols=55 Identities=5% Similarity=0.062 Sum_probs=38.3
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCC--ccccccccccC
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSP--TVKSSWKQGSN 804 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~--~vk~~A~~~~~ 804 (808)
-+.|. .|+.-|+.+-+. .+ . -|+++| |..|+++|. .| |.+.+.| ..+.+|||..+
T Consensus 853 R~sP~---QKa~IV~~vk~~-~~-~-----vtlaIGDGaNDv~mIq~Ad-VG--IGIsG~EG~qA~~aSDfaI~ 913 (1178)
T PLN03190 853 RVAPL---QKAGIVALVKNR-TS-D-----MTLAIGDGANDVSMIQMAD-VG--VGISGQEGRQAVMASDFAMG 913 (1178)
T ss_pred cCCHH---HHHHHHHHHHhc-CC-c-----EEEEECCCcchHHHHHhcC-ee--eeecCchhHHHHHhhccchh
Confidence 35664 899988865432 21 1 589999 999999996 56 4445544 56778888765
No 285
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=60.66 E-value=5.9 Score=38.80 Aligned_cols=22 Identities=14% Similarity=0.179 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCCCcceeEEEEeC
Q psy2719 748 RASIHILRTMYGVDWSERVRIIYAGN 773 (808)
Q Consensus 748 ~av~~ll~~~~~i~~~~~~~via~GD 773 (808)
..-+.++++ +|++++ +++.+||
T Consensus 143 ~~f~~~~~~-~~~~p~---~~l~vgD 164 (175)
T TIGR01493 143 VVYELVFDT-VGLPPD---RVLMVAA 164 (175)
T ss_pred HHHHHHHHH-HCCCHH---HeEeEec
Confidence 344666775 788765 7999994
No 286
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=60.23 E-value=3.8 Score=43.82 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC---C-Ccc-ccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS---S-PTV-KSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~---~-~~v-k~~A~~~~~~ 805 (808)
.|..++..++++ ++++++ ++++|| |+.+-+.+|-. ++.+.. . +++ ...|+|+.++
T Consensus 196 ~k~~~~~~~l~~-~~~~p~---~~l~IGDs~~Di~aA~~AG~~--~I~v~~g~~~~~~l~~~~ad~~i~~ 259 (273)
T PRK13225 196 SKRRALSQLVAR-EGWQPA---AVMYVGDETRDVEAARQVGLI--AVAVTWGFNDRQSLVAACPDWLLET 259 (273)
T ss_pred CCHHHHHHHHHH-hCcChh---HEEEECCCHHHHHHHHHCCCe--EEEEecCCCCHHHHHHCCCCEEECC
Confidence 467788888886 788764 799999 77777777522 344441 2 223 3457777653
No 287
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=59.54 E-value=4.7 Score=42.78 Aligned_cols=38 Identities=13% Similarity=0.006 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhcCCC-CCcceeEEEEe----CHHHHHhccCCccEEEeC
Q psy2719 747 GRASIHILRTMYGVD-WSERVRIIYAG----NEDAMLALQGIACTFRVD 790 (808)
Q Consensus 747 G~av~~ll~~~~~i~-~~~~~~via~G----D~~Mf~~~~~~~~~vav~ 790 (808)
-..+..++++ +|+. .+ ++++|| |+.+=+.+| + .+++|.
T Consensus 161 p~~~~~a~~~-l~~~~~~---e~l~IGDs~~Di~aA~~aG-~-~~i~v~ 203 (267)
T PRK13478 161 PWMALKNAIE-LGVYDVA---ACVKVDDTVPGIEEGLNAG-M-WTVGVI 203 (267)
T ss_pred hHHHHHHHHH-cCCCCCc---ceEEEcCcHHHHHHHHHCC-C-EEEEEc
Confidence 4566777776 7885 33 799999 666666665 2 245554
No 288
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=58.99 E-value=8.4 Score=37.66 Aligned_cols=14 Identities=50% Similarity=0.722 Sum_probs=11.5
Q ss_pred EEEEecccccccCC
Q psy2719 545 SLILDYDGTLTPLT 558 (808)
Q Consensus 545 li~~D~DGTLl~~~ 558 (808)
|++||+||||+...
T Consensus 1 l~~fD~DgTl~~~~ 14 (177)
T TIGR01488 1 LAIFDFDGTLTRQD 14 (177)
T ss_pred CEEecCccccccch
Confidence 47899999999743
No 289
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=58.87 E-value=1.6e+02 Score=36.34 Aligned_cols=150 Identities=8% Similarity=0.079 Sum_probs=94.9
Q ss_pred CCCeEEEEEcCccccCChHH-HHHHHHHHH--HhCCCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVH-RIKAFERLL--EKHPEYV-EKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~-~l~A~~~ll--~~~p~~~-~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
++..+++.+-|+..-|-... +|.-+.++. +++|+.. ..+++|..|...+++... .++-+.|..++..||..=...
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~in~Dp~v~ 606 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMA-KLIIKLINAVADVVNNDPDVG 606 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHhccChhcC
Confidence 56678899999999998887 666655543 3456522 236777777666555432 356677777777777542223
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC------ceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH------EALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~------~~llv 456 (808)
+.-.|+|+... .-.--..++.+|||-...|+ .|.=|..-+=+|. .|++-+|..-|+.-++. +++++
T Consensus 607 ~~lkVVFlenY-~VslAe~iipaaDvseqis~ag~EASGTsnMK~~l-----NGaltlgtlDGanvEi~e~vG~eN~fiF 680 (797)
T cd04300 607 DKLKVVFLPNY-NVSLAEKIIPAADLSEQISTAGKEASGTGNMKFML-----NGALTIGTLDGANVEIAEEVGEENIFIF 680 (797)
T ss_pred CceEEEEeCCC-ChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHh-----cCceeeecccchhHHHHHHhCcCcEEEe
Confidence 33457777643 33333468999999888876 3444444444433 58889999889866551 46777
Q ss_pred CCCCHHHHHH
Q psy2719 457 NPYEIDAAAN 466 (808)
Q Consensus 457 nP~d~~~lA~ 466 (808)
-. +.+++.+
T Consensus 681 G~-~~~ev~~ 689 (797)
T cd04300 681 GL-TAEEVEA 689 (797)
T ss_pred CC-CHHHHHH
Confidence 43 5555543
No 290
>PLN03007 UDP-glucosyltransferase family protein
Probab=58.73 E-value=1.1e+02 Score=35.59 Aligned_cols=80 Identities=13% Similarity=-0.008 Sum_probs=45.2
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCc----cccCceEEEC---------
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAG----GMMHEALLVN--------- 457 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~----~~l~~~llvn--------- 457 (808)
.+.+.+|+.++ +..+++-++=+ .-|+| ..+||++++.|-=+.++-++----+ +.+.-|+-+.
T Consensus 348 ~v~~w~PQ~~i---L~h~~v~~fvt-H~G~n-S~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 422 (482)
T PLN03007 348 IIRGWAPQVLI---LDHQATGGFVT-HCGWN-SLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKG 422 (482)
T ss_pred EEecCCCHHHH---hccCccceeee-cCcch-HHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccccccc
Confidence 34578888765 66666533322 36776 7789999976521122222221112 1122244331
Q ss_pred -CCCHHHHHHHHHHHhCCC
Q psy2719 458 -PYEIDAAANVLHRALCMP 475 (808)
Q Consensus 458 -P~d~~~lA~ai~~~L~~~ 475 (808)
--+.+++++++.+++..+
T Consensus 423 ~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 423 DFISREKVEKAVREVIVGE 441 (482)
T ss_pred CcccHHHHHHHHHHHhcCc
Confidence 137789999999999754
No 291
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=58.29 E-value=5.2 Score=41.05 Aligned_cols=40 Identities=15% Similarity=-0.013 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD 790 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~ 790 (808)
.+....+.++++ +|++++ ++++|| |+++-+.+|-. ++.+.
T Consensus 149 p~~~~~~~~~~~-~~~~~~---~~~~igDs~~Di~aA~~aG~~--~i~v~ 192 (222)
T PRK10826 149 PHPEVYLNCAAK-LGVDPL---TCVALEDSFNGMIAAKAARMR--SIVVP 192 (222)
T ss_pred CCHHHHHHHHHH-cCCCHH---HeEEEcCChhhHHHHHHcCCE--EEEec
Confidence 455688888986 899865 799999 88888888622 35555
No 292
>COG4996 Predicted phosphatase [General function prediction only]
Probab=58.06 E-value=16 Score=34.16 Aligned_cols=16 Identities=25% Similarity=0.291 Sum_probs=13.3
Q ss_pred eEEEEecccccccCCC
Q psy2719 544 LSLILDYDGTLTPLTS 559 (808)
Q Consensus 544 rli~~D~DGTLl~~~~ 559 (808)
++|+||.||||.++..
T Consensus 1 ~~i~~d~d~t~wdhh~ 16 (164)
T COG4996 1 RAIVFDADKTLWDHHN 16 (164)
T ss_pred CcEEEeCCCccccccc
Confidence 4799999999998643
No 293
>PLN02208 glycosyltransferase family protein
Probab=58.00 E-value=1.9e+02 Score=33.25 Aligned_cols=79 Identities=13% Similarity=0.078 Sum_probs=47.8
Q ss_pred EcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----CceEEECC-----CCHH
Q psy2719 392 IFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----HEALLVNP-----YEID 462 (808)
Q Consensus 392 ~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llvnP-----~d~~ 462 (808)
+.+.+|+.++ ++...+.++=+ .-|+| ..+|+++++.|-=+.++-++-..-+..+ +-|+.++. -+.+
T Consensus 315 v~~W~PQ~~i---L~H~~v~~Fvt-HcG~n-S~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~ 389 (442)
T PLN02208 315 WGGWVQQPLI---LDHPSIGCFVN-HCGPG-TIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKE 389 (442)
T ss_pred eeccCCHHHH---hcCCccCeEEc-cCCch-HHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHH
Confidence 3477888775 55666544433 36776 5689999975522222223332222222 23677754 4778
Q ss_pred HHHHHHHHHhCCC
Q psy2719 463 AAANVLHRALCMP 475 (808)
Q Consensus 463 ~lA~ai~~~L~~~ 475 (808)
+++++|.++++.+
T Consensus 390 ~l~~ai~~~m~~~ 402 (442)
T PLN02208 390 SLSNAIKSVMDKD 402 (442)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999754
No 294
>PLN00414 glycosyltransferase family protein
Probab=57.46 E-value=1.6e+02 Score=33.88 Aligned_cols=111 Identities=7% Similarity=0.052 Sum_probs=62.1
Q ss_pred EcCCCCHHHHHHHHHhc--CeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----CceEEECC-----CC
Q psy2719 392 IFGCIGQEELAALYRDS--AIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----HEALLVNP-----YE 460 (808)
Q Consensus 392 ~~~~v~~~el~aly~~A--dv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llvnP-----~d 460 (808)
+.+.+|+.++ ++.+ ++||. .-|+| ..+|+++++.|-=+.++..+-.--+..+ +-|+.+.. -+
T Consensus 316 v~~w~PQ~~v---L~h~~v~~fvt---H~G~n-S~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~ 388 (446)
T PLN00414 316 WEGWVEQPLI---LSHPSVGCFVN---HCGFG-SMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFS 388 (446)
T ss_pred EeccCCHHHH---hcCCccceEEe---cCchh-HHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccC
Confidence 3578888876 4445 45653 25665 6689999965421112222222222222 23666642 47
Q ss_pred HHHHHHHHHHHhCCCHHH---HHHHHHHHhHHHhcC-CHHHHHHHHHHHHHcc
Q psy2719 461 IDAAANVLHRALCMPRDE---RELRMSQLRHREQQL-DVNHWMNSFLSSMGAL 509 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e---~~~r~~~~~~~v~~~-~~~~W~~~~l~~l~~~ 509 (808)
.+++++++.+++..+.++ .+++.+.+++.+..- ....+.++|++++.+.
T Consensus 389 ~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 389 KESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred HHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 889999999999754322 223333344433333 3256677888777554
No 295
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=57.15 E-value=6.1 Score=40.43 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhcc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQ 781 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~ 781 (808)
-+......++++ +|++++ ++++|| |++.=+.+|
T Consensus 143 P~p~~~~~a~~~-~~~~p~---~~l~igDs~~di~aA~~aG 179 (221)
T PRK10563 143 PDPALMFHAAEA-MNVNVE---NCILVDDSSAGAQSGIAAG 179 (221)
T ss_pred CChHHHHHHHHH-cCCCHH---HeEEEeCcHhhHHHHHHCC
Confidence 356777888886 898765 799999 555555554
No 296
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=56.31 E-value=37 Score=41.09 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=40.9
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
++.|. +|-..|+.+.++ | .-|...| |.+.++.+. .| +||++ .+-.|++||.++-+
T Consensus 486 ~~~Pe---dK~~iV~~lQ~~--G------~~VaMtGDGvNDAPALa~AD-VG--IAMgsGTdvAkeAADiVLld 545 (673)
T PRK14010 486 ECKPE---DKINVIREEQAK--G------HIVAMTGDGTNDAPALAEAN-VG--LAMNSGTMSAKEAANLIDLD 545 (673)
T ss_pred CCCHH---HHHHHHHHHHhC--C------CEEEEECCChhhHHHHHhCC-EE--EEeCCCCHHHHHhCCEEEcC
Confidence 56665 888888876542 3 1477788 999999995 55 99985 67789999998753
No 297
>PRK09449 dUMP phosphatase; Provisional
Probab=55.85 E-value=5.6 Score=40.77 Aligned_cols=41 Identities=15% Similarity=0.095 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEeCH--HHHHhccCCcc-EEEeC
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAGNE--DAMLALQGIAC-TFRVD 790 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~GD~--~Mf~~~~~~~~-~vav~ 790 (808)
-.....++++ +|+... ++++++||- .-++++...|+ ++.+.
T Consensus 153 p~~~~~~~~~-~~~~~~--~~~~~vgD~~~~Di~~A~~aG~~~i~~~ 196 (224)
T PRK09449 153 VAIFDYALEQ-MGNPDR--SRVLMVGDNLHSDILGGINAGIDTCWLN 196 (224)
T ss_pred HHHHHHHHHH-cCCCCc--ccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence 3566777886 786432 279999942 23455544454 45554
No 298
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=55.68 E-value=6 Score=39.70 Aligned_cols=31 Identities=10% Similarity=0.143 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhcc
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQ 781 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~ 781 (808)
....+.++++ +|++++ +++.|| |+.+-+.+|
T Consensus 151 ~~~~~~~~~~-~~~~p~---~~~~vgD~~~Di~~A~~~G 185 (198)
T TIGR01428 151 PQVYQLALEA-LGVPPD---EVLFVASNPWDLGGAKKFG 185 (198)
T ss_pred HHHHHHHHHH-hCCChh---hEEEEeCCHHHHHHHHHCC
Confidence 4566778876 898875 799999 555555553
No 299
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=55.52 E-value=6 Score=40.87 Aligned_cols=13 Identities=46% Similarity=0.728 Sum_probs=12.0
Q ss_pred eEEEEeccccccc
Q psy2719 544 LSLILDYDGTLTP 556 (808)
Q Consensus 544 rli~~D~DGTLl~ 556 (808)
+.++||+||||++
T Consensus 3 ~avIFD~DGvLvD 15 (221)
T COG0637 3 KAVIFDMDGTLVD 15 (221)
T ss_pred cEEEEcCCCCcCc
Confidence 5799999999998
No 300
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=55.07 E-value=27 Score=44.01 Aligned_cols=57 Identities=12% Similarity=0.177 Sum_probs=43.9
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC--CCccccccccccCc
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS--SPTVKSSWKQGSNH 805 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~--~~~vk~~A~~~~~~ 805 (808)
|--+.|. +|..-|+.+-++ | .-|.+.| |.+|++.|. .| |+|+. .+-.|++||.++-+
T Consensus 619 fARvsP~---qK~~IV~~lq~~--g------~vVamtGDGvNDapALk~AD-VG--Iamg~~Gtdaak~Aadivl~d 681 (917)
T COG0474 619 FARVSPE---QKARIVEALQKS--G------HVVAMTGDGVNDAPALKAAD-VG--IAMGGEGTDAAKEAADIVLLD 681 (917)
T ss_pred EEEcCHH---HHHHHHHHHHhC--C------CEEEEeCCCchhHHHHHhcC-cc--EEecccHHHHHHhhcceEeec
Confidence 4567775 899999876542 3 1588889 999999996 66 88884 57789999988764
No 301
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=54.97 E-value=5.9 Score=40.52 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC--CCcc-ccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS--SPTV-KSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~--~~~v-k~~A~~~~~~ 805 (808)
.|..+++.++++ ++++.+ .+++|| |++|.+.+|-.++.|..+. ..++ ...++|+.++
T Consensus 150 p~~~~~~~~~~~-~~~~~~---~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~ 213 (226)
T PRK13222 150 PDPAPLLLACEK-LGLDPE---EMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDH 213 (226)
T ss_pred cChHHHHHHHHH-cCCChh---heEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECC
Confidence 356788888886 788764 799999 8999988863332333221 2223 2456676654
No 302
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=53.93 E-value=36 Score=37.09 Aligned_cols=71 Identities=13% Similarity=0.138 Sum_probs=46.9
Q ss_pred CCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---------CceEEECCCCHHHH
Q psy2719 394 GCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---------HEALLVNPYEIDAA 464 (808)
Q Consensus 394 ~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---------~~~llvnP~d~~~l 464 (808)
+..+ +++.++|..||+++..+ |++ ++.|++++++| +|+.-..|-.++. +-|+.++..+. ++
T Consensus 235 ~~~~-~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g~P----~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~ 304 (321)
T TIGR00661 235 RITT-DNFKELIKNAELVITHG---GFS-LISEALSLGKP----LIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RL 304 (321)
T ss_pred ECCh-HHHHHHHHhCCEEEECC---ChH-HHHHHHHcCCC----EEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HH
Confidence 4444 68999999999999876 554 58999999754 5555555544442 12777777666 44
Q ss_pred HHHHHHHhCC
Q psy2719 465 ANVLHRALCM 474 (808)
Q Consensus 465 A~ai~~~L~~ 474 (808)
.+++...+++
T Consensus 305 ~~~~~~~~~~ 314 (321)
T TIGR00661 305 LEAILDIRNM 314 (321)
T ss_pred HHHHHhcccc
Confidence 4455555443
No 303
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=52.99 E-value=12 Score=34.96 Aligned_cols=28 Identities=14% Similarity=0.068 Sum_probs=21.8
Q ss_pred EEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 547 ILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 547 ~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
+.++++|+..- .++-+++.+.|++|.+.
T Consensus 18 ~~~v~~tiatg------Gklf~ev~e~iqeL~d~ 45 (152)
T COG4087 18 AGKVLYTIATG------GKLFSEVSETIQELHDM 45 (152)
T ss_pred cceEEEEEccC------cEEcHhhHHHHHHHHHh
Confidence 56889999873 35678888889988875
No 304
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=52.95 E-value=16 Score=37.27 Aligned_cols=13 Identities=38% Similarity=0.583 Sum_probs=11.7
Q ss_pred eEEEEeccccccc
Q psy2719 544 LSLILDYDGTLTP 556 (808)
Q Consensus 544 rli~~D~DGTLl~ 556 (808)
+|++||+||||++
T Consensus 2 ~la~FDlD~TLi~ 14 (203)
T TIGR02137 2 EIACLDLEGVLVP 14 (203)
T ss_pred eEEEEeCCcccHH
Confidence 5799999999997
No 305
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=52.94 E-value=17 Score=36.39 Aligned_cols=42 Identities=12% Similarity=0.061 Sum_probs=33.4
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS 791 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~ 791 (808)
+-.|..+++.++++ .+++.+ .++++| |.+|++.++ .+ ++|..
T Consensus 153 g~~K~~~l~~~~~~-~~~~~~---~~~~~gDs~~D~~~~~~a~-~~--~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAE-EQIDLK---DSYAYGDSISDLPLLSLVG-HP--YVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHH-cCCCHH---HcEeeeCCcccHHHHHhCC-Cc--EEeCC
Confidence 56788889999986 788764 789999 999999996 33 66653
No 306
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=52.17 E-value=2.5e+02 Score=32.69 Aligned_cols=112 Identities=15% Similarity=0.096 Sum_probs=57.9
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccc----cCceEEEC-----CCCH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGM----MHEALLVN-----PYEI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~----l~~~llvn-----P~d~ 461 (808)
++.+.+++.++.+- .+.++||- .-|+| +.+||+++++|-=+.+..++-.--+.. ++-|+.++ ..+.
T Consensus 346 ~v~~w~PQ~~vL~h-~~v~~fvt---H~G~n-S~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~ 420 (477)
T PLN02863 346 VIRGWAPQVAILSH-RAVGAFLT---HCGWN-SVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDS 420 (477)
T ss_pred EecCCCCHHHHhcC-CCcCeEEe---cCCch-HHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCH
Confidence 34578888765332 23455553 36777 678999997652111222222222221 22366662 2367
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHh----c-CCHHHHHHHHHHHHHc
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQ----Q-LDVNHWMNSFLSSMGA 508 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~----~-~~~~~W~~~~l~~l~~ 508 (808)
+++++++.+++. ..++.+++.+..++.++ . -+...-.++|++.+.+
T Consensus 421 ~~v~~~v~~~m~-~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~ 471 (477)
T PLN02863 421 DELARVFMESVS-ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVE 471 (477)
T ss_pred HHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHH
Confidence 899999999874 22333344333333221 1 1444555555555543
No 307
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=51.59 E-value=7.4 Score=44.96 Aligned_cols=52 Identities=10% Similarity=0.061 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC---CCccccccccccCc
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS---SPTVKSSWKQGSNH 805 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~---~~~vk~~A~~~~~~ 805 (808)
|-..+..++++ ++. + ++++|| |+.+-+.+| . .++++.. .++-...++|+..+
T Consensus 387 kP~~~~~al~~-l~~--~---~~v~VGDs~~Di~aAk~AG-~-~~I~v~~~~~~~~~~~~~d~~i~~ 445 (459)
T PRK06698 387 KSDLVKSILNK-YDI--K---EAAVVGDRLSDINAAKDNG-L-IAIGCNFDFAQEDELAQADIVIDD 445 (459)
T ss_pred CcHHHHHHHHh-cCc--c---eEEEEeCCHHHHHHHHHCC-C-eEEEEeCCCCcccccCCCCEEeCC
Confidence 45567777765 543 2 799999 777777765 2 2455542 12222346776553
No 308
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=50.90 E-value=74 Score=30.43 Aligned_cols=72 Identities=15% Similarity=0.231 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHh
Q psy2719 328 HRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRD 407 (808)
Q Consensus 328 ~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~ 407 (808)
.-++++..+++++ ++..|+||.|-.-++..+. ..+.+++.+.++..+|+ .||++.....+-.+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 4466666777765 4567889998766655554 66678888888888876 488888888776666555555
Q ss_pred cC
Q psy2719 408 SA 409 (808)
Q Consensus 408 Ad 409 (808)
++
T Consensus 110 ~~ 111 (141)
T COG0816 110 AG 111 (141)
T ss_pred cC
Confidence 44
No 309
>PLN02448 UDP-glycosyltransferase family protein
Probab=50.53 E-value=66 Score=37.18 Aligned_cols=79 Identities=11% Similarity=0.034 Sum_probs=45.8
Q ss_pred EcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----CceEEECC-------CC
Q psy2719 392 IFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----HEALLVNP-------YE 460 (808)
Q Consensus 392 ~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llvnP-------~d 460 (808)
+.+.+|+.++ ++.+++..+=+ .-|+| +.+||++++.|-=+.++..+--.-+..+ +-|+.+.. .+
T Consensus 327 v~~w~pQ~~i---L~h~~v~~fvt-HgG~n-S~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~ 401 (459)
T PLN02448 327 VVPWCDQLKV---LCHSSVGGFWT-HCGWN-STLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVG 401 (459)
T ss_pred EeccCCHHHH---hccCccceEEe-cCchh-HHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCc
Confidence 3478888776 44566622222 36776 6789999976521222222222222222 22666532 37
Q ss_pred HHHHHHHHHHHhCCC
Q psy2719 461 IDAAANVLHRALCMP 475 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~ 475 (808)
.++++++++++|..+
T Consensus 402 ~~~l~~av~~vl~~~ 416 (459)
T PLN02448 402 REEIAELVKRFMDLE 416 (459)
T ss_pred HHHHHHHHHHHhcCC
Confidence 799999999999754
No 310
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=50.32 E-value=63 Score=37.24 Aligned_cols=78 Identities=12% Similarity=-0.006 Sum_probs=45.2
Q ss_pred cCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----CceEEE-CCCCHHHHHHH
Q psy2719 393 FGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----HEALLV-NPYEIDAAANV 467 (808)
Q Consensus 393 ~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llv-nP~d~~~lA~a 467 (808)
.+.+|+.++.+- .+..+||. .-|+| +.+||+++++|-=+.++.++--.-+..+ +-|+.+ ...+.++++++
T Consensus 329 ~~w~PQ~~iL~h-~~v~~fvt---H~G~n-S~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~a 403 (451)
T PLN02410 329 VKWAPQKEVLSH-PAVGGFWS---HCGWN-STLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERA 403 (451)
T ss_pred EccCCHHHHhCC-CccCeeee---cCchh-HHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHH
Confidence 478888876432 23344553 36777 6789999965421112222222222211 236555 34578899999
Q ss_pred HHHHhCCC
Q psy2719 468 LHRALCMP 475 (808)
Q Consensus 468 i~~~L~~~ 475 (808)
+++++..+
T Consensus 404 v~~lm~~~ 411 (451)
T PLN02410 404 VKRLMVEE 411 (451)
T ss_pred HHHHHcCC
Confidence 99999754
No 311
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=50.08 E-value=1.7e+02 Score=32.57 Aligned_cols=28 Identities=7% Similarity=0.011 Sum_probs=24.4
Q ss_pred HHHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 401 LAALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 401 l~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
...+|++||+.+..| |.+.+|++.++.|
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g~P 256 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIGTP 256 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhCCC
Confidence 457899999999998 7899999999765
No 312
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=49.20 E-value=9 Score=38.84 Aligned_cols=40 Identities=25% Similarity=0.287 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS 792 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~ 792 (808)
....+.++++ +|++++ ++++|| |+.+=+.+| + -++.+.+.
T Consensus 155 p~~~~~~~~~-~g~~~~---~~l~i~D~~~di~aA~~aG-~-~~i~v~~~ 198 (211)
T TIGR02247 155 PRIYQLMLER-LGVAPE---ECVFLDDLGSNLKPAAALG-I-TTIKVSDE 198 (211)
T ss_pred HHHHHHHHHH-cCCCHH---HeEEEcCCHHHHHHHHHcC-C-EEEEECCH
Confidence 4466777776 888865 789999 555555554 2 25666643
No 313
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=48.97 E-value=54 Score=42.17 Aligned_cols=56 Identities=7% Similarity=0.055 Sum_probs=41.5
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCc
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
|--+.|. .|..-|+.+-+ .|. -|...| |.+|++.|. .| ++|++.+ +..+|++++.+
T Consensus 782 fAR~sP~---qK~~iV~~lq~--~g~------~V~m~GDG~ND~~ALK~Ad-VG--Iam~~~d-as~AA~f~l~~ 841 (1054)
T TIGR01657 782 FARMAPD---QKETLVELLQK--LDY------TVGMCGDGANDCGALKQAD-VG--ISLSEAE-ASVAAPFTSKL 841 (1054)
T ss_pred EEecCHH---HHHHHHHHHHh--CCC------eEEEEeCChHHHHHHHhcC-cc--eeecccc-ceeecccccCC
Confidence 3456775 89999987654 341 588889 999999996 66 8898653 55788988763
No 314
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=48.96 E-value=2.9e+02 Score=31.30 Aligned_cols=100 Identities=9% Similarity=0.087 Sum_probs=61.5
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---------CceEEEC--CC
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---------HEALLVN--PY 459 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---------~~~llvn--P~ 459 (808)
+....+++.+ ++..||+++.. -|+|.+ .|++..++| .+|.-. ..++. +-|..+. +.
T Consensus 287 ~v~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~gvP---~vv~P~---~~DQ~~nA~rve~~G~G~~l~~~~l 353 (406)
T COG1819 287 IVADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAGVP---LVVIPD---GADQPLNAERVEELGAGIALPFEEL 353 (406)
T ss_pred EEecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcCCC---EEEecC---CcchhHHHHHHHHcCCceecCcccC
Confidence 3456777765 68999999976 577754 789988654 222222 13332 2355554 79
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 460 EIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 460 d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
..+.++++|.++|+++ .-+++...+++....++...=+.+.+.+
T Consensus 354 ~~~~l~~av~~vL~~~--~~~~~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 354 TEERLRAAVNEVLADD--SYRRAAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred CHHHHHHHHHHHhcCH--HHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 9999999999999853 3333344455555555544444444444
No 315
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=48.72 E-value=1.8e+02 Score=31.17 Aligned_cols=66 Identities=15% Similarity=0.216 Sum_probs=43.3
Q ss_pred CHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc------C---ceEEECCC--CHHHHH
Q psy2719 397 GQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM------H---EALLVNPY--EIDAAA 465 (808)
Q Consensus 397 ~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l------~---~~llvnP~--d~~~lA 465 (808)
+..++..++..||++|..+ |+| +..|++++++| +++=...|..++. . -|..+++. +++.++
T Consensus 240 ~~~~~~~~m~~ad~vIs~~---G~~-t~~Ea~~~g~P----~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~ 311 (318)
T PF13528_consen 240 STPDFAELMAAADLVISKG---GYT-TISEALALGKP----ALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLA 311 (318)
T ss_pred ChHHHHHHHHhCCEEEECC---CHH-HHHHHHHcCCC----EEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHH
Confidence 4578899999999998764 443 37899999765 3333333555554 1 25555543 567888
Q ss_pred HHHHH
Q psy2719 466 NVLHR 470 (808)
Q Consensus 466 ~ai~~ 470 (808)
++|.+
T Consensus 312 ~~l~~ 316 (318)
T PF13528_consen 312 EFLER 316 (318)
T ss_pred HHHhc
Confidence 87765
No 316
>KOG2884|consensus
Probab=48.53 E-value=2.4e+02 Score=28.89 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=23.2
Q ss_pred ceEEEcCCCCCccccC-----ceEEECCCCHHHHHHHHHHHh
Q psy2719 436 GVLILSPFAGAGGMMH-----EALLVNPYEIDAAANVLHRAL 472 (808)
Q Consensus 436 g~vVlS~~~G~~~~l~-----~~llvnP~d~~~lA~ai~~~L 472 (808)
.|++.-|.+|+.-.+. -.+=|+|.+-.++|.||+--+
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM 227 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM 227 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH
Confidence 3556555555444442 145688888889999988543
No 317
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=48.44 E-value=3e+02 Score=30.47 Aligned_cols=68 Identities=13% Similarity=0.163 Sum_probs=45.1
Q ss_pred HHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC-C--cccc---------CceEEECC--CCHHHH
Q psy2719 399 EELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG-A--GGMM---------HEALLVNP--YEIDAA 464 (808)
Q Consensus 399 ~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G-~--~~~l---------~~~llvnP--~d~~~l 464 (808)
+++..+|+.||+++.-+ =+.+..|+++++.| .|+--+.. + .++. +.+..+.. .+++.+
T Consensus 244 ~~m~~~~~~adlvIsr~----G~~t~~E~~~~g~P----~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l 315 (352)
T PRK12446 244 GELPDILAITDFVISRA----GSNAIFEFLTLQKP----MLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSL 315 (352)
T ss_pred hhHHHHHHhCCEEEECC----ChhHHHHHHHcCCC----EEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHH
Confidence 57889999999988653 25788999999765 33333321 1 1232 12455543 357899
Q ss_pred HHHHHHHhCC
Q psy2719 465 ANVLHRALCM 474 (808)
Q Consensus 465 A~ai~~~L~~ 474 (808)
+++|..++++
T Consensus 316 ~~~l~~ll~~ 325 (352)
T PRK12446 316 IKHVEELSHN 325 (352)
T ss_pred HHHHHHHHcC
Confidence 9999999864
No 318
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=48.39 E-value=27 Score=41.54 Aligned_cols=54 Identities=9% Similarity=0.087 Sum_probs=40.3
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccC
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN 804 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~ 804 (808)
++.|. +|...++++.++ .+ .++++| |.+|++.++ . +++|++ .+..+..||+++.
T Consensus 449 ~~~p~---~K~~~v~~l~~~-----~~---~v~~VGDg~nD~~al~~A~-v--gia~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 449 EVLPD---DKAALIKELQEK-----GR---VVAMVGDGINDAPALAQAD-V--GIAIGAGTDVAIEAADVVLM 507 (562)
T ss_pred cCChH---HHHHHHHHHHHc-----CC---EEEEEeCCCccHHHHhhCC-E--EEEeCCcCHHHHhhCCEEEe
Confidence 45553 888888876542 11 799999 999999995 4 588885 4567888999885
No 319
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=46.68 E-value=11 Score=37.89 Aligned_cols=24 Identities=29% Similarity=0.380 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChh
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLE 633 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~ 633 (808)
..+.|++|.+. |..++++|+|+..
T Consensus 78 A~e~l~~L~~~-g~~~~~Itar~~~ 101 (191)
T PF06941_consen 78 AVEALKKLRDK-GHEIVIITARPPE 101 (191)
T ss_dssp HHHHHHHHHTS-TTEEEEEEE-SSS
T ss_pred HHHHHHHHHHc-CCcEEEEEecCcc
Confidence 56788888864 6677888878643
No 320
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=46.45 E-value=10 Score=37.43 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=21.1
Q ss_pred CHHHHHHHH---HHHhcCCCCCcceeEEEEe----CHHHHH
Q psy2719 745 DQGRASIHI---LRTMYGVDWSERVRIIYAG----NEDAML 778 (808)
Q Consensus 745 ~KG~av~~l---l~~~~~i~~~~~~~via~G----D~~Mf~ 778 (808)
+|..+++.+ .. . +++.. .++++| |.+||+
T Consensus 157 ~K~~~l~~~~~~~~-~-~~~~~---~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDE-E-DIDPD---RVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHH-H-THTCC---EEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhh-c-CCCCC---eEEEEECCHHHHHHhC
Confidence 499999998 22 1 33332 799999 999986
No 321
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=43.52 E-value=11 Score=36.15 Aligned_cols=11 Identities=55% Similarity=0.927 Sum_probs=0.0
Q ss_pred EEEeccccccc
Q psy2719 546 LILDYDGTLTP 556 (808)
Q Consensus 546 i~~D~DGTLl~ 556 (808)
|+||+||||++
T Consensus 1 iifD~dgtL~d 11 (176)
T PF13419_consen 1 IIFDLDGTLVD 11 (176)
T ss_dssp EEEESBTTTEE
T ss_pred cEEECCCCcEe
No 322
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=43.41 E-value=4.8e+02 Score=31.98 Aligned_cols=184 Identities=14% Similarity=0.170 Sum_probs=108.3
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCC-CccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHP-EYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWS 387 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p-~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~ 387 (808)
++..+++++=|+..-|-....+.=..++...-- ++..++.+|..|...+++... .++-..+...+..+|.+ .
T Consensus 485 p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~a-K~iIk~I~~~a~~in~~------l 557 (750)
T COG0058 485 PNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAA-KEIIKLINDVADVINNK------L 557 (750)
T ss_pred CCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHH-HHHHHHHHHHHHhhccc------c
Confidence 356789999999999988776666555554333 555677777777655444322 35666777777777763 2
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC-----CceEEEcCCCCCccccC------ceEEE
Q psy2719 388 PIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE-----PGVLILSPFAGAGGMMH------EALLV 456 (808)
Q Consensus 388 ~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~-----~g~vVlS~~~G~~~~l~------~~llv 456 (808)
.|+|+... +-.--..++.+|||-..+|+ ..+|| ||+.. .|++-+|..-|+.-++. +++++
T Consensus 558 kVvFl~nY-dvslA~~iipa~Dvweqis~------a~~EA--SGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~f 628 (750)
T COG0058 558 KVVFLPNY-DVSLAELLIPAADVWEQIPT------AGKEA--SGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIF 628 (750)
T ss_pred eEEEeCCC-ChhHHHhhcccccccccCCC------CCccc--cCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEe
Confidence 57777643 33333457899999888876 45563 55443 58888899999876652 47887
Q ss_pred CCCCHHHHHHHHHHHhCCCHHH---HHHHHHHHhHHH-h-cCCHHHHHHHHHHHHHcccc
Q psy2719 457 NPYEIDAAANVLHRALCMPRDE---RELRMSQLRHRE-Q-QLDVNHWMNSFLSSMGALDN 511 (808)
Q Consensus 457 nP~d~~~lA~ai~~~L~~~~~e---~~~r~~~~~~~v-~-~~~~~~W~~~~l~~l~~~~~ 511 (808)
-. +.++.-.-...... +..+ ............ . ..+. .|...|-+.+..+..
T Consensus 629 G~-~~~~v~~~~~~~~~-~~~~y~~~~~~v~~~~~~~~~~~~~p-~~~~~~~~~~~sl~~ 685 (750)
T COG0058 629 GE-TVEEVDALRADGYD-PNALYYELENEVKPVLDEIIDGRFSP-GWKSRFKNLIDSLLP 685 (750)
T ss_pred CC-chhhHHHHHhcccc-cHHHHHHHhHHHHHHHHHHhcccCCc-ccHHHHHHHHHHhhh
Confidence 44 33333322222221 1111 111112222211 1 2232 788888777777644
No 323
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=43.39 E-value=28 Score=32.42 Aligned_cols=20 Identities=25% Similarity=0.102 Sum_probs=15.6
Q ss_pred CCCEEEEeccchHHHHHHHH
Q psy2719 218 VVPVVWIHDYQLLVAATTIR 237 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr 237 (808)
+.|+|++|+++..+++..++
T Consensus 73 ~~Dvv~~~~~~~~~~~~~~~ 92 (160)
T PF13579_consen 73 RPDVVHAHSPTAGLVAALAR 92 (160)
T ss_dssp --SEEEEEHHHHHHHHHHHH
T ss_pred CCeEEEecccchhHHHHHHH
Confidence 48999999998877777777
No 324
>KOG1618|consensus
Probab=42.56 E-value=35 Score=36.85 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=26.9
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMP 581 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~ 581 (808)
.+.--|+||+||.|+.- +.+-++..++|+.|.++.
T Consensus 33 ~~~fgfafDIDGVL~RG------~~~i~~~~~Alr~L~~~~ 67 (389)
T KOG1618|consen 33 PPTFGFAFDIDGVLFRG------HRPIPGALKALRRLVDNQ 67 (389)
T ss_pred CCceeEEEecccEEEec------CCCCcchHHHHHHHHhcC
Confidence 34557999999999973 345577889999998773
No 325
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=42.32 E-value=5.4e+02 Score=28.90 Aligned_cols=136 Identities=14% Similarity=0.190 Sum_probs=87.4
Q ss_pred CCeEEEEEcCcccc-CChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHH-HHHhccCCCCCCc
Q psy2719 310 NLKVILGVDRLDYT-KGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLV-GRINGRFSKPNWS 387 (808)
Q Consensus 310 ~~~iil~V~Rl~~~-KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv-~~in~~~g~~~~~ 387 (808)
.+.+++..-|..-. +++...+.|+.++++++|+.. +|.-..+. +.. ++.+ ..+ +.. .
T Consensus 204 ~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~~----~~v-------~e~~~~~L----~~~--~ 262 (383)
T COG0381 204 KKYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHPR----PRV-------RELVLKRL----KNV--E 262 (383)
T ss_pred CcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCCC----hhh-------hHHHHHHh----CCC--C
Confidence 34667777777766 999999999999999998763 33222221 211 2222 112 111 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-c-eEEECCCCHHHHH
Q psy2719 388 PIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-E-ALLVNPYEIDAAA 465 (808)
Q Consensus 388 ~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~-~llvnP~d~~~lA 465 (808)
.+ .+..++...+...|+..|-+.+--| |-.--||-.-++| ++++-+.+-=.+.+. + .++|++ |.+.+.
T Consensus 263 ~v-~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~P---vl~lR~~TERPE~v~agt~~lvg~-~~~~i~ 332 (383)
T COG0381 263 RV-KLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKP---VLVLRDTTERPEGVEAGTNILVGT-DEENIL 332 (383)
T ss_pred cE-EEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCc---EEeeccCCCCccceecCceEEeCc-cHHHHH
Confidence 34 4557889999999999997776655 3456788777643 444444444445453 3 456654 889999
Q ss_pred HHHHHHhCCCH
Q psy2719 466 NVLHRALCMPR 476 (808)
Q Consensus 466 ~ai~~~L~~~~ 476 (808)
+++.++++++.
T Consensus 333 ~~~~~ll~~~~ 343 (383)
T COG0381 333 DAATELLEDEE 343 (383)
T ss_pred HHHHHHhhChH
Confidence 99999998643
No 326
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=42.21 E-value=66 Score=28.83 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHH
Q psy2719 327 VHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKAL 366 (808)
Q Consensus 327 ~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l 366 (808)
..+...++++++.+|+.+ +|+||..+..|.+.|.++
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~i 84 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAEI 84 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHHH
Confidence 588999999999999875 888897766676666544
No 327
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=41.84 E-value=11 Score=36.79 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhc
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLAL 780 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~ 780 (808)
....+.++++ +|++++ ++++|| |+.+-+.+
T Consensus 143 ~~~~~~~~~~-~~~~~~---~~~~vgD~~~di~aA~~~ 176 (183)
T TIGR01509 143 PDIYLLALKK-LGLKPE---ECLFVDDSPAGIEAAKAA 176 (183)
T ss_pred HHHHHHHHHH-cCCCcc---eEEEEcCCHHHHHHHHHc
Confidence 5567778876 788765 799999 44444444
No 328
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=41.77 E-value=19 Score=45.54 Aligned_cols=57 Identities=12% Similarity=0.147 Sum_probs=41.9
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
+-.+.|. +|...++.+ +. .| ..|.++| |.+|++.++ .| ++|++ .+.+|++||+++.+
T Consensus 611 ~ar~~P~---~K~~iV~~l-q~-~g------~~va~iGDG~ND~~alk~Ad-VG--ia~g~g~~~ak~aAD~vl~d 672 (917)
T TIGR01116 611 FSRVEPS---HKSELVELL-QE-QG------EIVAMTGDGVNDAPALKKAD-IG--IAMGSGTEVAKEASDMVLAD 672 (917)
T ss_pred EEecCHH---HHHHHHHHH-Hh-cC------CeEEEecCCcchHHHHHhCC-ee--EECCCCcHHHHHhcCeEEcc
Confidence 3456665 898888855 33 22 1567799 999999995 45 88985 57788999999875
No 329
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=41.71 E-value=2.2e+02 Score=35.14 Aligned_cols=150 Identities=11% Similarity=0.067 Sum_probs=93.5
Q ss_pred CCCeEEEEEcCccccCChHH-HHHHHHHHH--HhCCCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVH-RIKAFERLL--EKHPEYV-EKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~-~l~A~~~ll--~~~p~~~-~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
++..+++.+-|+..-|-... +|..+.++. +++|+.. ..+++|..|...+++... ..+-+.|..++..+|..=...
T Consensus 527 p~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~in~Dp~v~ 605 (798)
T PRK14985 527 PQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVAEVINNDPLVG 605 (798)
T ss_pred chhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhcCChhhC
Confidence 45667888999999998877 666655543 3456532 236777777666554332 345567777777787432222
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC------ceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH------EALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~------~~llv 456 (808)
+.-.|+|+.. ..-.--..++.+|||-...|. .|.=|..-+=||. .|++-+|..-|+.-++. +++++
T Consensus 606 ~~lkVVFlen-Y~VslAe~lipaaDvseqis~ag~EASGTsnMK~am-----NGaLtlgtlDGanvEi~e~vG~eN~f~f 679 (798)
T PRK14985 606 DKLKVVFLPD-YCVSAAELLIPAADISEQISTAGKEASGTGNMKLAL-----NGALTVGTLDGANVEIAEQVGEENIFIF 679 (798)
T ss_pred CceeEEEeCC-CChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHh-----cCceeeecccchHHHHHHHhCcCcEEEe
Confidence 3335777754 333444568999999888776 3444444444433 58899999999855541 47777
Q ss_pred CCCCHHHHHH
Q psy2719 457 NPYEIDAAAN 466 (808)
Q Consensus 457 nP~d~~~lA~ 466 (808)
-. +.+++.+
T Consensus 680 G~-~~~ev~~ 688 (798)
T PRK14985 680 GH-TVEQVKA 688 (798)
T ss_pred CC-CHHHHHH
Confidence 54 4555443
No 330
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=41.68 E-value=13 Score=37.31 Aligned_cols=44 Identities=16% Similarity=0.307 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEeCH-HHHHhccCCcc-EEEeCCCC
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAGNE-DAMLALQGIAC-TFRVDSSP 793 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~GD~-~Mf~~~~~~~~-~vav~~~~ 793 (808)
+....+.++++ +|++++ ++++|||. .-++++...|+ ++.+.+..
T Consensus 143 ~p~~~~~~~~~-~~~~p~---~~l~vgD~~~di~aA~~aG~~~i~~~~~~ 188 (199)
T PRK09456 143 EARIYQHVLQA-EGFSAA---DAVFFDDNADNIEAANALGITSILVTDKQ 188 (199)
T ss_pred CHHHHHHHHHH-cCCChh---HeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence 45667778886 898875 79999931 22444443443 45555543
No 331
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=41.65 E-value=14 Score=37.20 Aligned_cols=29 Identities=17% Similarity=0.249 Sum_probs=21.8
Q ss_pred HHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhcc
Q psy2719 749 ASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQ 781 (808)
Q Consensus 749 av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~ 781 (808)
....+++. ++++.+ .|+++| |..|+++++
T Consensus 183 ~~~~~i~~-l~~~~~---~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKE-LQVKPG---EVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHH-HTCTGG---GEEEEESSGGHHHHHHHSS
T ss_pred hHHHHHHH-HhcCCC---EEEEEccCHHHHHHHHhCc
Confidence 44666765 676654 799999 999999874
No 332
>KOG2134|consensus
Probab=39.03 E-value=30 Score=38.35 Aligned_cols=18 Identities=39% Similarity=0.584 Sum_probs=14.4
Q ss_pred CceEEEEecccccccCCC
Q psy2719 542 CKLSLILDYDGTLTPLTS 559 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~ 559 (808)
..+++.|||||||....+
T Consensus 74 ~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CcceEEEecCCceeecCC
Confidence 446899999999998543
No 333
>PLN00164 glucosyltransferase; Provisional
Probab=37.44 E-value=1.5e+02 Score=34.50 Aligned_cols=80 Identities=11% Similarity=-0.053 Sum_probs=46.5
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcc----ccCceEEECC-------C
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGG----MMHEALLVNP-------Y 459 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~----~l~~~llvnP-------~ 459 (808)
++.+.+++.++ ++.+++..+=+ .-|+| +.+|++++++|-=+.++..+----+. .++-|+.++. .
T Consensus 342 ~v~~w~PQ~~i---L~h~~vg~fvt-H~Gwn-S~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~ 416 (480)
T PLN00164 342 VWPTWAPQKEI---LAHAAVGGFVT-HCGWN-SVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFV 416 (480)
T ss_pred EEeecCCHHHH---hcCcccCeEEe-ecccc-hHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcC
Confidence 34578888765 55566533333 36777 67899999754211122222221121 1233776642 2
Q ss_pred CHHHHHHHHHHHhCCC
Q psy2719 460 EIDAAANVLHRALCMP 475 (808)
Q Consensus 460 d~~~lA~ai~~~L~~~ 475 (808)
+.++++++|.+++..+
T Consensus 417 ~~e~l~~av~~vm~~~ 432 (480)
T PLN00164 417 EAAELERAVRSLMGGG 432 (480)
T ss_pred cHHHHHHHHHHHhcCC
Confidence 5789999999999754
No 334
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=37.37 E-value=18 Score=36.92 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.6
Q ss_pred ceEEEEecccccccCC
Q psy2719 543 KLSLILDYDGTLTPLT 558 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~ 558 (808)
.+.|+||+||||++..
T Consensus 4 ~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 4 IKAILFDLDGTLLDFD 19 (229)
T ss_pred eeEEEEecCCcccccc
Confidence 4689999999999853
No 335
>PLN02764 glycosyltransferase family protein
Probab=36.90 E-value=1.2e+02 Score=34.93 Aligned_cols=113 Identities=10% Similarity=0.072 Sum_probs=60.1
Q ss_pred EcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----CceEEECC-----CCHH
Q psy2719 392 IFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----HEALLVNP-----YEID 462 (808)
Q Consensus 392 ~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llvnP-----~d~~ 462 (808)
+.+.+|+.++.+- .+..+||- .-|+| ..+|+++++.|-=+.+..++----+..+ +-|+.+.+ -+.+
T Consensus 321 ~~~W~PQ~~vL~h-~~v~~Fvt---H~G~n-S~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e 395 (453)
T PLN02764 321 WGGWVQQPLILSH-PSVGCFVS---HCGFG-SMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKE 395 (453)
T ss_pred EeCCCCHHHHhcC-cccCeEEe---cCCch-HHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHH
Confidence 4578899887443 33444553 35665 5689999965421112222222222222 12555533 3778
Q ss_pred HHHHHHHHHhCCCHH---HHHHHHHHHhHHHhcC-CHHHHHHHHHHHHHcc
Q psy2719 463 AAANVLHRALCMPRD---ERELRMSQLRHREQQL-DVNHWMNSFLSSMGAL 509 (808)
Q Consensus 463 ~lA~ai~~~L~~~~~---e~~~r~~~~~~~v~~~-~~~~W~~~~l~~l~~~ 509 (808)
++++++.++++.+.+ +.+++...+++.+.+- +...-.+.|++.+.+.
T Consensus 396 ~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 396 SLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDL 446 (453)
T ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 999999999975422 2233333344444322 4455555666665554
No 336
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=36.84 E-value=3.4e+02 Score=29.61 Aligned_cols=30 Identities=20% Similarity=0.230 Sum_probs=19.8
Q ss_pred HHHHHHHhcCeEEECCCCCCCChhHHHHHHhcc
Q psy2719 400 ELAALYRDSAIALVTPLRDGMNLVAKEYVACQI 432 (808)
Q Consensus 400 el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~ 432 (808)
=+.+++..||.+++|. |-.+++ -||+++++
T Consensus 221 Py~~~La~ad~i~VT~--DSvSMv-sEA~~tG~ 250 (311)
T PF06258_consen 221 PYLGFLAAADAIVVTE--DSVSMV-SEAAATGK 250 (311)
T ss_pred cHHHHHHhCCEEEEcC--ccHHHH-HHHHHcCC
Confidence 3667778888888776 444443 57777753
No 337
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=36.62 E-value=3e+02 Score=34.00 Aligned_cols=151 Identities=9% Similarity=0.078 Sum_probs=94.1
Q ss_pred CCCeEEEEEcCccccCChHH-HHHHHHHHH--HhCCCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVH-RIKAFERLL--EKHPEYV-EKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~-~l~A~~~ll--~~~p~~~-~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
++..+++.+-|+..-|-... +|..+.++. ++.|+.. ..+++|..|...+++... +.+-+.|..++..||..=...
T Consensus 525 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~iN~Dp~v~ 603 (794)
T TIGR02093 525 PNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMA-KLIIKLINSVAEVVNNDPAVG 603 (794)
T ss_pred ccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHH-HHHHHHHHHHHHHhccChhhC
Confidence 45667888999999998877 666655443 3456431 235677777666555432 356667777777777542223
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC------ceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH------EALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~------~~llv 456 (808)
+.-.|+|+... .-.--..++.+|||-...|+ .|.=|..-+=+|. .|++-+|..-|+.-++. +++++
T Consensus 604 ~~lkVVFlenY-~VslAe~iipaaDvseqistag~EASGTsnMK~al-----NGaltlgtlDGanvEi~e~vG~eN~fiF 677 (794)
T TIGR02093 604 DKLKVVFVPNY-NVSLAELIIPAADLSEQISTAGKEASGTGNMKFML-----NGALTIGTLDGANVEIREEVGAENIFIF 677 (794)
T ss_pred CceeEEEeCCC-ChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHh-----cCcceeecccchhHHHHHHhCcccEEEc
Confidence 33457777543 33334468999999888876 3444444444433 48888899888866552 36666
Q ss_pred CCCCHHHHHHH
Q psy2719 457 NPYEIDAAANV 467 (808)
Q Consensus 457 nP~d~~~lA~a 467 (808)
- .+.+++.+.
T Consensus 678 G-~~~~ev~~~ 687 (794)
T TIGR02093 678 G-LTVEEVEAL 687 (794)
T ss_pred C-CCHHHHHHH
Confidence 3 456665543
No 338
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=36.18 E-value=1.2e+02 Score=32.33 Aligned_cols=84 Identities=30% Similarity=0.400 Sum_probs=54.3
Q ss_pred HhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHH
Q psy2719 534 LNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVL 613 (808)
Q Consensus 534 ~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l 613 (808)
++...+ +.+.++++|.+|-|-+..+ + ..+++-..+.++++.++. .++|.| -..++.++
T Consensus 171 iA~aLk-AekLi~ltdv~Gvl~~~~~-~--s~i~~~~~~~~~~li~~~-----~i~~GM-------------i~Kv~~a~ 228 (265)
T COG0548 171 LAAALK-AEKLILLTDVPGVLDDKGD-P--SLISELDAEEAEELIEQG-----IITGGM-------------IPKVEAAL 228 (265)
T ss_pred HHHHcC-CCeEEEEeCCcccccCCCC-c--eeeccCCHHHHHHHHhcC-----CccCcc-------------HHHHHHHH
Confidence 455555 5678889999999976432 1 345555556666666551 334444 34566677
Q ss_pred HHHhCCCCC-eEEEEeCCChhh-HHHhcCc
Q psy2719 614 ERLANMPDV-NIGIISGRTLEN-LMKMVNI 641 (808)
Q Consensus 614 ~~l~~~pg~-~v~I~SGR~~~~-l~~~~~~ 641 (808)
+++.+ |+ .+.|++||.... +.++|..
T Consensus 229 ~A~~~--Gv~~v~ii~g~~~~~ll~eLFt~ 256 (265)
T COG0548 229 EALES--GVRRVHIISGRVPHSLLLELFTR 256 (265)
T ss_pred HHHHh--CCCeEEEecCCCcchHHHHHhcC
Confidence 77665 55 799999998877 5566654
No 339
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=35.96 E-value=97 Score=32.69 Aligned_cols=16 Identities=25% Similarity=0.295 Sum_probs=14.1
Q ss_pred CceEEEEecccccccC
Q psy2719 542 CKLSLILDYDGTLTPL 557 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~ 557 (808)
..-|++||+|-||+..
T Consensus 19 ~~tLvvfDiDdTLi~~ 34 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITP 34 (252)
T ss_pred CCeEEEEEcchhhhcC
Confidence 6679999999999974
No 340
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=35.14 E-value=1.3e+02 Score=35.38 Aligned_cols=81 Identities=14% Similarity=0.116 Sum_probs=55.7
Q ss_pred cCCCCHHHHHHHHHhcCeEE-ECCCCCCCChhHHHHHHhccC----C----Cc-------------eEEEcCCCCCcccc
Q psy2719 393 FGCIGQEELAALYRDSAIAL-VTPLRDGMNLVAKEYVACQIR----E----PG-------------VLILSPFAGAGGMM 450 (808)
Q Consensus 393 ~~~v~~~el~aly~~Adv~v-~~S~~EG~gLv~~Eama~~~~----~----~g-------------~vVlS~~~G~~~~l 450 (808)
+|.++.+|+..+++.|.||| +-.-+| |=.++||||.|.+ . .+ -=+.|....+..-+
T Consensus 327 HG~l~~~ef~~lL~~akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 327 HGILSGDEFQQLLRKAKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred cCcCCHHHHHHHHHhhhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 47789999999999999999 333466 5689999998631 0 00 01112221111112
Q ss_pred C--ceEEECCCCHHHHHHHHHHHhCCC
Q psy2719 451 H--EALLVNPYEIDAAANVLHRALCMP 475 (808)
Q Consensus 451 ~--~~llvnP~d~~~lA~ai~~~L~~~ 475 (808)
+ .-+.|+-.|.+++-+||+++|+++
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 2 368899999999999999999875
No 341
>PLN02207 UDP-glycosyltransferase
Probab=34.90 E-value=1.4e+02 Score=34.54 Aligned_cols=112 Identities=12% Similarity=0.008 Sum_probs=58.4
Q ss_pred EcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----CceEEEC---------C
Q psy2719 392 IFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----HEALLVN---------P 458 (808)
Q Consensus 392 ~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llvn---------P 458 (808)
+.+.+|+.++.+- .+..+||- .-|+| ..+|++.+++|-=+.++-++--.-+..+ +-|+-++ -
T Consensus 336 i~~W~PQ~~IL~H-~~vg~FvT---H~Gwn-S~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~ 410 (468)
T PLN02207 336 ICGWSPQVEILAH-KAVGGFVS---HCGWN-SIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEI 410 (468)
T ss_pred EEEeCCHHHHhcc-cccceeee---cCccc-cHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCc
Confidence 3478898887553 33334553 36777 5589999965421222222222222211 2255442 2
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-----cCCHHHHHHHHHHHHHc
Q psy2719 459 YEIDAAANVLHRALCMPRDERELRMSQLRHREQ-----QLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 459 ~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-----~~~~~~W~~~~l~~l~~ 508 (808)
-+.++++++|++++....++.+++...+.+.++ .-+...-.++|++++..
T Consensus 411 v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~ 465 (468)
T PLN02207 411 VNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIG 465 (468)
T ss_pred ccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 267899999999985223344444433333222 12445555666655544
No 342
>PLN03004 UDP-glycosyltransferase
Probab=34.72 E-value=1e+02 Score=35.57 Aligned_cols=79 Identities=11% Similarity=0.014 Sum_probs=49.5
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----CceEEECC-----CCH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----HEALLVNP-----YEI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llvnP-----~d~ 461 (808)
.+.+.+|+.++ ++.+++..+=+ .-|+| ..+|++++++|-=+.++-++-..-+..+ +-|+.++. -+.
T Consensus 337 ~v~~W~PQ~~i---L~H~~v~~FvT-H~G~n-S~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~ 411 (451)
T PLN03004 337 VVKSWAPQVPV---LNHKAVGGFVT-HCGWN-SILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSS 411 (451)
T ss_pred EEEeeCCHHHH---hCCCccceEec-cCcch-HHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCH
Confidence 34578888875 67788733333 35666 7789999976532223333333333323 23777753 267
Q ss_pred HHHHHHHHHHhCC
Q psy2719 462 DAAANVLHRALCM 474 (808)
Q Consensus 462 ~~lA~ai~~~L~~ 474 (808)
++++++|+++++.
T Consensus 412 e~l~~av~~vm~~ 424 (451)
T PLN03004 412 TEVEKRVQEIIGE 424 (451)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999863
No 343
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=33.88 E-value=1.2e+02 Score=34.96 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=49.0
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----CceEEEC-----CCCH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----HEALLVN-----PYEI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llvn-----P~d~ 461 (808)
++.+.+|+.++ ++...+-++-+ .-|+| ..+|++.+++|-=+.++-++--.-+..+ +-|+-+. .-+.
T Consensus 330 ~v~~W~PQ~~i---L~h~~vg~fvt-H~G~n-S~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 330 MIVSWCSQIEV---LRHRAVGCFVT-HCGWS-SSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred EEEeeCCHHHH---hCCcccceEEe-eCCcc-cHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 34478888765 66666533333 25665 6789999976522222223322222222 1255542 2367
Q ss_pred HHHHHHHHHHhCCCHHHHHHHH
Q psy2719 462 DAAANVLHRALCMPRDERELRM 483 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~ 483 (808)
+++++++.++++.+.++.+++.
T Consensus 405 e~l~~av~~vm~~~~~~~r~~a 426 (455)
T PLN02152 405 GEIRRCLEAVMEEKSVELRESA 426 (455)
T ss_pred HHHHHHHHHHHhhhHHHHHHHH
Confidence 8999999999964333333333
No 344
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=33.80 E-value=6.4e+02 Score=27.48 Aligned_cols=110 Identities=14% Similarity=0.027 Sum_probs=58.2
Q ss_pred CCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC---hHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy2719 310 NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD---VLEYKALKDEMDQLVGRINGRFSKPNW 386 (808)
Q Consensus 310 ~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~---~~~~~~l~~~l~~lv~~in~~~g~~~~ 386 (808)
+..+|...|-+.+..- ..+-+|-+.+..+.+.+....+.|+||++++.- ......+.++|.+++..-+.
T Consensus 112 ~~Nvl~t~ga~~~i~~-~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~------- 183 (311)
T PF06258_consen 112 GPNVLPTLGAPNRITP-ERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGG------- 183 (311)
T ss_pred CCceEecccCCCcCCH-HHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCC-------
Confidence 4557777777766553 234445556666666666677788899887653 22233555555555544321
Q ss_pred ccEEEE-cCCCCHHHHHHHHHhc---C-eEEECCCCCCCChhHHHHHHhc
Q psy2719 387 SPIRYI-FGCIGQEELAALYRDS---A-IALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 387 ~~v~~~-~~~v~~~el~aly~~A---d-v~v~~S~~EG~gLv~~Eama~~ 431 (808)
.+.+. .+.-+.+-..+|-..+ + +.+. -.+|-| ...+++++.
T Consensus 184 -~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~--~~~~~n-Py~~~La~a 229 (311)
T PF06258_consen 184 -SLLVTTSRRTPPEAEAALRELLKDNPGVYIW--DGTGEN-PYLGFLAAA 229 (311)
T ss_pred -eEEEEcCCCCcHHHHHHHHHhhcCCCceEEe--cCCCCC-cHHHHHHhC
Confidence 12222 2333444444444433 2 3244 456655 456777763
No 345
>KOG4549|consensus
Probab=32.90 E-value=59 Score=30.30 Aligned_cols=38 Identities=13% Similarity=0.229 Sum_probs=27.4
Q ss_pred ceEEEEecccccccCCCCCC----ccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSHPD----LAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~----~~~i~~~~~~~L~~L~~~ 580 (808)
.+++-+|+|+|+-|....+. ...+-+.....|..|+++
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~ 59 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKL 59 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhc
Confidence 36889999999998654332 224556778888888887
No 346
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=32.36 E-value=69 Score=31.68 Aligned_cols=81 Identities=16% Similarity=0.096 Sum_probs=38.6
Q ss_pred CceEEEEecccccccCCCCC--CccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHP--DLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANM 619 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~--~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~ 619 (808)
....+-||+|.|++=..+.- ....++|..-+.|+.-.-- - .+-.--+..-++.++..-|-.+---
T Consensus 62 ~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW------~-------~vn~g~D~~SIPKevA~qLI~MHq~ 128 (237)
T COG3700 62 PPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFW------E-------KVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred CCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHH------H-------HHhcCCccccchHHHHHHHHHHHHh
Confidence 34567789999998532221 2334555544444321000 0 0000112233444443332222222
Q ss_pred CCCeEEEEeCCChhhH
Q psy2719 620 PDVNIGIISGRTLENL 635 (808)
Q Consensus 620 pg~~v~I~SGR~~~~l 635 (808)
.|-.|+.+|||+....
T Consensus 129 RGD~i~FvTGRt~gk~ 144 (237)
T COG3700 129 RGDAIYFVTGRTPGKT 144 (237)
T ss_pred cCCeEEEEecCCCCcc
Confidence 3788999999987543
No 347
>PLN02210 UDP-glucosyl transferase
Probab=32.32 E-value=1.4e+02 Score=34.45 Aligned_cols=76 Identities=11% Similarity=0.061 Sum_probs=45.3
Q ss_pred cCCCCHHHHHHHHHhcC--eEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccc----cCceEEECC------CC
Q psy2719 393 FGCIGQEELAALYRDSA--IALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGM----MHEALLVNP------YE 460 (808)
Q Consensus 393 ~~~v~~~el~aly~~Ad--v~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~----l~~~llvnP------~d 460 (808)
.+.+|+.++ ++.+. +||. .-|+| ..+|+++++.|-=+.+...+----+.. ++-|+.++. -+
T Consensus 329 ~~w~PQ~~i---L~h~~vg~Fit---H~G~n-S~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 401 (456)
T PLN02210 329 LEWSPQEKI---LSHMAISCFVT---HCGWN-STIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELK 401 (456)
T ss_pred EecCCHHHH---hcCcCcCeEEe---eCCcc-cHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCC
Confidence 478888765 56666 4542 36777 668999996541111111222111111 234766642 47
Q ss_pred HHHHHHHHHHHhCCC
Q psy2719 461 IDAAANVLHRALCMP 475 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~ 475 (808)
.+++++++++++..+
T Consensus 402 ~~~l~~av~~~m~~~ 416 (456)
T PLN02210 402 VEEVERCIEAVTEGP 416 (456)
T ss_pred HHHHHHHHHHHhcCc
Confidence 789999999999754
No 348
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=31.31 E-value=5.6e+02 Score=27.36 Aligned_cols=28 Identities=14% Similarity=0.247 Sum_probs=15.9
Q ss_pred HHHHHHhcCeEEECCCCCCCChhHHHHHHhc
Q psy2719 401 LAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 401 l~aly~~Adv~v~~S~~EG~gLv~~Eama~~ 431 (808)
+.+++.+||.++.|. |..++ +-||.+++
T Consensus 238 Y~~~La~Adyii~Ta--DSinM-~sEAasTg 265 (329)
T COG3660 238 YIDMLAAADYIISTA--DSINM-CSEAASTG 265 (329)
T ss_pred hHHHHhhcceEEEec--chhhh-hHHHhccC
Confidence 556667777666654 33333 35666654
No 349
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=30.97 E-value=75 Score=33.13 Aligned_cols=20 Identities=25% Similarity=0.285 Sum_probs=15.6
Q ss_pred CCceEEEEecccccccCCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSH 560 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~ 560 (808)
.+...|++|+|-|.++....
T Consensus 77 ~K~~aVvlDlDETvLdNs~Y 96 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAY 96 (274)
T ss_pred CCCceEEEecchHhhcCccc
Confidence 34569999999999986443
No 350
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=30.70 E-value=2.2e+02 Score=30.66 Aligned_cols=92 Identities=15% Similarity=0.105 Sum_probs=47.6
Q ss_pred HHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHH
Q psy2719 531 DLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETK 610 (808)
Q Consensus 531 ~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~ 610 (808)
...++.... +.+.++++|.||-+...-.+|+...++.-....+..+...... .+.||.+ -..+.
T Consensus 184 Aa~lA~~l~-Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~~~~~~s--~~gtGGM-------------~~Kl~ 247 (284)
T cd04256 184 AARLAVELK-ADLLILLSDVDGLYDGPPGSDDAKLIHTFYPGDQQSITFGTKS--RVGTGGM-------------EAKVK 247 (284)
T ss_pred HHHHHHHcC-CCEEEEEeCCCeeecCCCCCCCCeEcccccHhHHHHhhccccc--CcccCCc-------------HHHHH
Confidence 334555544 5667788999999976422222222221111122222211001 1334444 22333
Q ss_pred HHHHHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 611 RVLERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 611 ~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
.....+. .|+.++|++|+....+.+.+.
T Consensus 248 Aa~~a~~--~Gi~v~I~~G~~~~~i~~~l~ 275 (284)
T cd04256 248 AALWALQ--GGTSVVITNGMAGDVITKILE 275 (284)
T ss_pred HHHHHHH--CCCeEEEEcCCCccHHHHHHc
Confidence 3333332 388999999998888877764
No 351
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=29.69 E-value=1.7e+02 Score=33.98 Aligned_cols=80 Identities=9% Similarity=0.039 Sum_probs=47.7
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----CceEEECC----CCHH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----HEALLVNP----YEID 462 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llvnP----~d~~ 462 (808)
.+.+.+|+.++ ++.+.+..+=+ .-|+| ..+|++.+++|-=+.++..+--.-+..+ +-|+.++. .+.+
T Consensus 341 vv~~W~PQ~~i---L~h~~vg~Fit-H~G~n-S~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~ 415 (481)
T PLN02992 341 VVPSWAPQAEI---LAHQAVGGFLT-HCGWS-STLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRS 415 (481)
T ss_pred EEeecCCHHHH---hCCcccCeeEe-cCchh-HHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcccHH
Confidence 34578898776 55566533222 35666 7789999975522222223322222222 23777743 5788
Q ss_pred HHHHHHHHHhCCC
Q psy2719 463 AAANVLHRALCMP 475 (808)
Q Consensus 463 ~lA~ai~~~L~~~ 475 (808)
+++++|.+++..+
T Consensus 416 ~l~~av~~vm~~~ 428 (481)
T PLN02992 416 KIEALVRKVMVEE 428 (481)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999754
No 352
>PLN02954 phosphoserine phosphatase
Probab=29.27 E-value=75 Score=32.34 Aligned_cols=15 Identities=20% Similarity=0.138 Sum_probs=12.8
Q ss_pred ceEEEEecccccccC
Q psy2719 543 KLSLILDYDGTLTPL 557 (808)
Q Consensus 543 ~rli~~D~DGTLl~~ 557 (808)
.++|+||+||||++.
T Consensus 12 ~k~viFDfDGTL~~~ 26 (224)
T PLN02954 12 ADAVCFDVDSTVCVD 26 (224)
T ss_pred CCEEEEeCCCcccch
Confidence 468999999999984
No 353
>PLN02167 UDP-glycosyltransferase family protein
Probab=28.89 E-value=2.2e+02 Score=33.10 Aligned_cols=79 Identities=13% Similarity=-0.022 Sum_probs=45.4
Q ss_pred EcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcc----ccCceEEECC---------
Q psy2719 392 IFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGG----MMHEALLVNP--------- 458 (808)
Q Consensus 392 ~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~----~l~~~llvnP--------- 458 (808)
+.+.+|+.++.+. .+.++||- .-|+| +.+|++++++|-=+.+..++----+. .++-|+.++.
T Consensus 344 v~~w~PQ~~iL~h-~~vg~fvt---H~G~n-S~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 418 (475)
T PLN02167 344 VCGWAPQVEILAH-KAIGGFVS---HCGWN-SVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEI 418 (475)
T ss_pred eeccCCHHHHhcC-cccCeEEe---eCCcc-cHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCc
Confidence 3478888776332 22445553 36777 67899999765212222222221121 1233776642
Q ss_pred CCHHHHHHHHHHHhCCC
Q psy2719 459 YEIDAAANVLHRALCMP 475 (808)
Q Consensus 459 ~d~~~lA~ai~~~L~~~ 475 (808)
.+.+++++++.+++..+
T Consensus 419 ~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 419 VKADEIAGAVRSLMDGE 435 (475)
T ss_pred ccHHHHHHHHHHHhcCC
Confidence 36789999999999643
No 354
>PTZ00489 glutamate 5-kinase; Provisional
Probab=28.72 E-value=2.3e+02 Score=30.20 Aligned_cols=19 Identities=21% Similarity=0.209 Sum_probs=17.1
Q ss_pred CCeEEEEeCCChhhHHHhc
Q psy2719 621 DVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~ 639 (808)
|+.++|++|+....+...+
T Consensus 228 Gi~v~I~~g~~~~~i~~~l 246 (264)
T PTZ00489 228 GGKMYLSSGFHLEKARDFL 246 (264)
T ss_pred CCCEEEEeCCCchHHHHHH
Confidence 8899999999998888877
No 355
>PLN02670 transferase, transferring glycosyl groups
Probab=28.67 E-value=1.2e+02 Score=35.33 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=64.6
Q ss_pred EcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---CceEEECC------CCHH
Q psy2719 392 IFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---HEALLVNP------YEID 462 (808)
Q Consensus 392 ~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---~~~llvnP------~d~~ 462 (808)
+.+.+|+.++ ++...+..+=+ .-|+| ..+|++++++|-=+.++-++-..-+..+ +-|+.++. -+.+
T Consensus 343 v~~W~PQ~~I---L~H~~v~~Fvt-HcGwn-S~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e 417 (472)
T PLN02670 343 HVGWVPQVKI---LSHESVGGFLT-HCGWN-SVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSD 417 (472)
T ss_pred EeCcCCHHHH---hcCcccceeee-cCCcc-hHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHH
Confidence 4578888775 55555533333 25555 5689999965421122222222222222 23777754 4589
Q ss_pred HHHHHHHHHhCCCH-HHHHHHHHHHhHHHhcC-CHHHHHHHHHHHHHcc
Q psy2719 463 AAANVLHRALCMPR-DERELRMSQLRHREQQL-DVNHWMNSFLSSMGAL 509 (808)
Q Consensus 463 ~lA~ai~~~L~~~~-~e~~~r~~~~~~~v~~~-~~~~W~~~~l~~l~~~ 509 (808)
+++++|.+++..++ ++.+++.+.+++.+... +...-++.+++.|.+.
T Consensus 418 ~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 418 SVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 99999999997532 24455555555555444 4456666666666654
No 356
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.12 E-value=51 Score=26.81 Aligned_cols=23 Identities=26% Similarity=0.573 Sum_probs=18.1
Q ss_pred HHHHHHHHhcCCCCCcceeEEEEe----CHHHHHh
Q psy2719 749 ASIHILRTMYGVDWSERVRIIYAG----NEDAMLA 779 (808)
Q Consensus 749 av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~ 779 (808)
-|+.+++. +| .+++|| |++|++.
T Consensus 6 DVqQlLK~-~G-------~ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKK-FG-------IIVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHH-CC-------eeeecCCHHHHHHHHHH
Confidence 36788886 77 689999 8888753
No 357
>KOG2116|consensus
Probab=28.11 E-value=74 Score=37.66 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=23.2
Q ss_pred CCeEEEEeCCChhhH---HHhcC-ccceEEEcccceeEecCCC
Q psy2719 621 DVNIGIISGRTLENL---MKMVN-IEKVTYAGSHGLEILHPDG 659 (808)
Q Consensus 621 g~~v~I~SGR~~~~l---~~~~~-~~~~~li~~nG~~i~~~~~ 659 (808)
|.+++-+|.|..... +.++. +...+.+.-+|=.+..|++
T Consensus 574 GYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~ 616 (738)
T KOG2116|consen 574 GYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDS 616 (738)
T ss_pred CeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCc
Confidence 899999999986543 33332 2223444555656655553
No 358
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=27.12 E-value=89 Score=37.16 Aligned_cols=57 Identities=14% Similarity=0.236 Sum_probs=43.6
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
..+.++++.||+++..-.- ...+.++..++|++|++. |
T Consensus 384 g~~~~~~~~~~~~~g~~~~--~d~l~~~a~e~i~~Lk~~----------------------------------------G 421 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFAL--EDQLRPEAKEVIQALKRR----------------------------------------G 421 (562)
T ss_pred CCEEEEEEECCEEEEEEEe--cccccHHHHHHHHHHHHc----------------------------------------C
Confidence 4567889999998753211 125678899999999887 8
Q ss_pred CeEEEEeCCChhhHHHhcC
Q psy2719 622 VNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~ 640 (808)
+.++++||......+....
T Consensus 422 i~v~ilSgd~~~~a~~ia~ 440 (562)
T TIGR01511 422 IEPVMLTGDNRKTAKAVAK 440 (562)
T ss_pred CeEEEEcCCCHHHHHHHHH
Confidence 9999999998877766654
No 359
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=24.70 E-value=6.8e+02 Score=26.04 Aligned_cols=111 Identities=18% Similarity=0.178 Sum_probs=61.0
Q ss_pred eEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEE
Q psy2719 312 KVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRY 391 (808)
Q Consensus 312 ~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~ 391 (808)
-++++-+|+....=+.....-+..|+.+.| ++++| |+.+...+++.+.+...+.-.+++. . +..
T Consensus 3 ~ll~s~~~~~~~~~l~~~~~~~~~~~~~~~----~v~fI----PtAs~~~~~~~y~~~~~~af~~lG~-------~-v~~ 66 (233)
T PRK05282 3 LLLLSNSTLPGTGYLEHALPLIAELLAGRR----KAVFI----PYAGVTQSWDDYTAKVAEALAPLGI-------E-VTG 66 (233)
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHHcCCC----eEEEE----CCCCCCCCHHHHHHHHHHHHHHCCC-------E-EEE
Confidence 467778887764444666666777766332 44444 3333223444444444555444432 2 333
Q ss_pred EcCCCCHHHHHHHHHhcCeEEECCC----------CCCCChhHHHHHHhccCCCceEEEcCCCCC
Q psy2719 392 IFGCIGQEELAALYRDSAIALVTPL----------RDGMNLVAKEYVACQIREPGVLILSPFAGA 446 (808)
Q Consensus 392 ~~~~v~~~el~aly~~Adv~v~~S~----------~EG~gLv~~Eama~~~~~~g~vVlS~~~G~ 446 (808)
+.. .++..+.+..||+..++-= .-|+--.+.|++.. |.+++...+|+
T Consensus 67 l~~---~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~-----G~~~~G~SAGA 123 (233)
T PRK05282 67 IHR---VADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAVKN-----GTPYIGWSAGA 123 (233)
T ss_pred ecc---chhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHHHC-----CCEEEEECHHH
Confidence 332 2445677899998777742 12444445677654 56677777776
No 360
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=24.38 E-value=59 Score=41.75 Aligned_cols=56 Identities=9% Similarity=0.090 Sum_probs=42.6
Q ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC-C-CCccccccccccCc
Q psy2719 736 IEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD-S-SPTVKSSWKQGSNH 805 (808)
Q Consensus 736 vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~-~-~~~vk~~A~~~~~~ 805 (808)
-.+.|. +|...|+.+-+. |. -|.++| |.+|++.+. .| +||+ + .+-.|++||+++.+
T Consensus 727 ar~sP~---~K~~iV~~lq~~--g~------~Vam~GDGvNDapaLk~Ad-VG--IAmg~~gt~vak~aADivl~d 788 (1053)
T TIGR01523 727 ARCAPQ---TKVKMIEALHRR--KA------FCAMTGDGVNDSPSLKMAN-VG--IAMGINGSDVAKDASDIVLSD 788 (1053)
T ss_pred EecCHH---HHHHHHHHHHhc--CC------eeEEeCCCcchHHHHHhCC-cc--EecCCCccHHHHHhcCEEEec
Confidence 346665 899999886542 31 588999 999999995 56 8898 4 46689999998864
No 361
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=24.31 E-value=1.2e+02 Score=29.34 Aligned_cols=61 Identities=20% Similarity=0.270 Sum_probs=49.1
Q ss_pred EEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC----c--eEEECCCCHHHHHHHHHHH
Q psy2719 411 ALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH----E--ALLVNPYEIDAAANVLHRA 471 (808)
Q Consensus 411 ~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~----~--~llvnP~d~~~lA~ai~~~ 471 (808)
.|---+-+|=||.++|++....+.--.+|++-++.++-.+. + -+|-.|-|.+++..|+.+.
T Consensus 58 vvDlkL~~gsGL~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl~~~ 124 (182)
T COG4567 58 VVDLKLGDGSGLAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAALLRR 124 (182)
T ss_pred EEEeeecCCCchHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHHHhhc
Confidence 34444568999999999998877778899999887776653 2 4789999999999998876
No 362
>TIGR00071 hisT_truA pseudouridylate synthase I. universal so far, single copy in all prokaryotes, 3 in yeast. Trusted cutoff for orthology is about 100 based on 1 match only in complete prokaryote with length 200.
Probab=24.27 E-value=72 Score=33.07 Aligned_cols=53 Identities=21% Similarity=0.328 Sum_probs=36.5
Q ss_pred eEEEEecccccc-cCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccC
Q psy2719 544 LSLILDYDGTLT-PLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRH 598 (808)
Q Consensus 544 rli~~D~DGTLl-~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~ 598 (808)
.++.+-||||=. ..+..|+..++..++.++|.++... ..-++.||||=.-..+
T Consensus 3 ~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~--~i~~~~agRTD~GVHA 56 (227)
T TIGR00071 3 IALKIAYDGSNYHGWQRQPNKRTVQGELEKALEAIGKK--KITIMSAGRTDKGVHA 56 (227)
T ss_pred EEEEEEEcCCCeeEEeECcCCCCHHHHHHHHHHHHhCC--CeeEEeeccCcCCccc
Confidence 457789999955 4444455567888899999998754 2346788898443333
No 363
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=24.23 E-value=87 Score=31.72 Aligned_cols=14 Identities=36% Similarity=0.515 Sum_probs=11.5
Q ss_pred ceEEEEeccccccc
Q psy2719 543 KLSLILDYDGTLTP 556 (808)
Q Consensus 543 ~rli~~D~DGTLl~ 556 (808)
-++++||+||||++
T Consensus 6 ~~~iiFD~DGTL~d 19 (226)
T PRK13222 6 IRAVAFDLDGTLVD 19 (226)
T ss_pred CcEEEEcCCccccc
Confidence 35789999999986
No 364
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=23.91 E-value=44 Score=38.95 Aligned_cols=15 Identities=33% Similarity=0.379 Sum_probs=12.9
Q ss_pred ceEEEEecccccccC
Q psy2719 543 KLSLILDYDGTLTPL 557 (808)
Q Consensus 543 ~rli~~D~DGTLl~~ 557 (808)
+..++||+||||+..
T Consensus 22 ~~~~~FDfDGTLt~~ 36 (497)
T PLN02177 22 NQTVAADLDGTLLIS 36 (497)
T ss_pred ccEEEEecCCcccCC
Confidence 457999999999983
No 365
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=23.80 E-value=3.3e+02 Score=28.72 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=28.1
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
++.+.+..+..|+.++++.||+++-+-. |.+-+. .|.++|
T Consensus 180 ~~~~~~~~~l~e~~~li~~~~l~I~~Ds----g~~HlA-~a~~~p 219 (279)
T cd03789 180 VVNLAGKTSLRELAALLARADLVVTNDS----GPMHLA-AALGTP 219 (279)
T ss_pred cccCcCCCCHHHHHHHHHhCCEEEeeCC----HHHHHH-HHcCCC
Confidence 3445677789999999999999997742 444444 466543
No 366
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=23.31 E-value=4.5e+02 Score=28.87 Aligned_cols=86 Identities=14% Similarity=0.165 Sum_probs=47.9
Q ss_pred CCeEEEEEcCccccCChH--HHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy2719 310 NLKVILGVDRLDYTKGLV--HRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWS 387 (808)
Q Consensus 310 ~~~iil~V~Rl~~~KGi~--~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~ 387 (808)
+..+++..|--.+.|..+ ...+..+.+ .+. .+ .++++|+|+.. +. ...+++++.++. .
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L-~~~-~~----~vvl~ggp~e~---e~----~~~~~i~~~~~~-------~ 242 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDAL-QAR-GY----EVVLTSGPDKD---DL----ACVNEIAQGCQT-------P 242 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHH-HHC-CC----eEEEEcCCChH---HH----HHHHHHHHhcCC-------C
Confidence 355677777766777765 333333333 332 22 24455654311 11 112233322221 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCeEEECC
Q psy2719 388 PIRYIFGCIGQEELAALYRDSAIALVTP 415 (808)
Q Consensus 388 ~v~~~~~~v~~~el~aly~~Adv~v~~S 415 (808)
+++-+.|..+-.|+.++++.||++|-+-
T Consensus 243 ~~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 243 PVTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred ccccccCCCCHHHHHHHHHhCCEEEecC
Confidence 3445678889999999999999998664
No 367
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=23.21 E-value=2.4e+02 Score=30.19 Aligned_cols=90 Identities=12% Similarity=0.106 Sum_probs=49.8
Q ss_pred CchhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHH-HHHHHHHhcCCCCccccccccccccccCCCCccc
Q psy2719 526 TLDDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEET-KRVLERLANMPDVNIGIISGRTLENLRHHPDLAV 604 (808)
Q Consensus 526 ~~~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~-~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~ 604 (808)
+.|.+..-++...+ +.+.++++|-+|-+-+. ...++.=+ .+-+++|.++ ..++|.|.-.
T Consensus 173 NaD~~A~~lA~aL~-A~KLIfltd~~GV~~~~-----g~lI~~l~~~~e~~~li~~-----g~i~gGm~~k--------- 232 (271)
T cd04236 173 DSSEVTTAIAKALQ-PIKVIFLNRSGGLRDQK-----HKVLPQVHLPADLPSLSDA-----EWLSETEQNR--------- 232 (271)
T ss_pred CHHHHHHHHHHHcC-CCEEEEEeCCcceECCC-----CCCccccCcHHHHHHHHhC-----CEEcCCeeec---------
Confidence 33444444555555 45667778988877431 12233322 2455566555 3566666221
Q ss_pred chHHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 605 MSEETKRVLERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 605 ~~~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
-++++++|+.|.+ |..|+|++ +-..+.+.|.
T Consensus 233 -i~ki~~~l~~l~~--g~sv~I~~--~~~ll~elft 263 (271)
T cd04236 233 -IQDIATLLNALPS--MSSAVITS--AETLLTELFS 263 (271)
T ss_pred -hHHHHHHHHhccc--CCeEEEeC--hHHHHHHHhc
Confidence 2357788888866 77866665 3334555553
No 368
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=22.93 E-value=1.4e+03 Score=27.54 Aligned_cols=27 Identities=22% Similarity=0.143 Sum_probs=24.6
Q ss_pred HHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 402 AALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 402 ~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
..++++||+.+.+| |.+.+|++.+++|
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g~P 509 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQTP 509 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhCCC
Confidence 58899999999999 8999999999865
No 369
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=22.56 E-value=40 Score=43.24 Aligned_cols=30 Identities=7% Similarity=0.121 Sum_probs=20.1
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.+.|+.|.+ .|++++|+|+.....++..+
T Consensus 166 ~~elL~~Lk~-~G~~l~IvSn~~~~~~~~~L 195 (1057)
T PLN02919 166 ALELITQCKN-KGLKVAVASSADRIKVDANL 195 (1057)
T ss_pred HHHHHHHHHh-CCCeEEEEeCCcHHHHHHHH
Confidence 3445555543 48999999998876655443
No 370
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=22.29 E-value=2.5e+02 Score=29.29 Aligned_cols=95 Identities=20% Similarity=0.269 Sum_probs=47.7
Q ss_pred hhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchH
Q psy2719 528 DDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSE 607 (808)
Q Consensus 528 ~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~ 607 (808)
|.....++.... +.+.++++|.||-+...- |+...++.=..+.++++.+.....-..++|.+ -.
T Consensus 150 D~~A~~lA~~l~-A~~li~ltdv~Gv~~~~P--~~~~~i~~i~~~~~~~~~~~~~~~~~~~tGGm-------------~~ 213 (252)
T cd04241 150 DDIVVELAKALK-PERVIFLTDVDGVYDKPP--PDAKLIPEIDVGSLEDILAALGSAGTDVTGGM-------------AG 213 (252)
T ss_pred HHHHHHHHHHcC-CCEEEEEeCCCeeECCCC--CCCeEcceeCccchHHHHHhcCcCCccccCCH-------------HH
Confidence 344444555544 567788999999986521 22222221111122333221000001133433 33
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
.+...++.+.. |+.++|++|+....+.+.+.
T Consensus 214 Kl~aa~~a~~~--Gv~v~I~~g~~~~~l~~~l~ 244 (252)
T cd04241 214 KIEELLELARR--GIEVYIFNGDKPENLYRALL 244 (252)
T ss_pred HHHHHHHHHhc--CCeEEEEeCCCHHHHHHHHc
Confidence 34444444443 88999999998777766653
No 371
>KOG0331|consensus
Probab=21.99 E-value=4.4e+02 Score=30.89 Aligned_cols=91 Identities=16% Similarity=0.180 Sum_probs=62.8
Q ss_pred EEEEcCccccCChHHHHHHHHHHHHh-CCCccC--cEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 314 ILGVDRLDYTKGLVHRIKAFERLLEK-HPEYVE--KVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 314 il~V~Rl~~~KGi~~~l~A~~~ll~~-~p~~~~--~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
+++++|----|-+..+|-|+..+... ...-++ ..+|| -.|+| ||..++.+.+.++....+ ...+.
T Consensus 131 ~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLV--L~PTR-------ELA~QV~~~~~~~~~~~~---~~~~c 198 (519)
T KOG0331|consen 131 LVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLV--LAPTR-------ELAVQVQAEAREFGKSLR---LRSTC 198 (519)
T ss_pred eEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEE--EcCcH-------HHHHHHHHHHHHHcCCCC---ccEEE
Confidence 77888888999999999999998873 222222 23444 34664 688888887777654432 22333
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCC
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPL 416 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~ 416 (808)
++.|.--..++..|-+.+||++-||-
T Consensus 199 vyGG~~~~~Q~~~l~~gvdiviaTPG 224 (519)
T KOG0331|consen 199 VYGGAPKGPQLRDLERGVDVVIATPG 224 (519)
T ss_pred EeCCCCccHHHHHHhcCCcEEEeCCh
Confidence 44444456788899999999998884
No 372
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=21.61 E-value=4.5e+02 Score=25.78 Aligned_cols=79 Identities=11% Similarity=0.040 Sum_probs=47.8
Q ss_pred EecccccccCCCCCC---ccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 548 LDYDGTLTPLTSHPD---LAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 548 ~D~DGTLl~~~~~~~---~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
+|+.|++++...... ......++.++|+++.+++++.+.|+++.+.- .+. .-.++..+.++++.+.+.-.+
T Consensus 2 i~~~g~i~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~vvl~~~~~g-----g~~-~~~~~~~~~i~~~~~~~kpVi 75 (177)
T cd07014 2 VFANGVIVDGEESSSDTQGNVSGDTTAAQIRDARLDPKVKAIVLRVNSPG-----GSV-TASEVIRAELAAARAAGKPVV 75 (177)
T ss_pred EEEEEEEeCCCCcCcCCCCCcCHHHHHHHHHHHhcCCCceEEEEEeeCCC-----cCH-HHHHHHHHHHHHHHhCCCCEE
Confidence 577888887432111 11223688889999999988888888775421 111 112345566777765555567
Q ss_pred EEEeCCCh
Q psy2719 625 GIISGRTL 632 (808)
Q Consensus 625 ~I~SGR~~ 632 (808)
+.+.|...
T Consensus 76 a~v~G~a~ 83 (177)
T cd07014 76 ASGGGNAA 83 (177)
T ss_pred EEECCchh
Confidence 77776654
No 373
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=21.29 E-value=3.9e+02 Score=25.02 Aligned_cols=72 Identities=18% Similarity=0.244 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHH
Q psy2719 327 VHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYR 406 (808)
Q Consensus 327 ~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~ 406 (808)
...+..+..+.++++ +..++||.|-..++.+ .+....+.+.++++..+|+ .||.+..+..+-.+-...|.
T Consensus 34 ~~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~ 103 (130)
T TIGR00250 34 EPDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLF 103 (130)
T ss_pred cHHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHH
Confidence 355677777877764 3467789876544432 3445566666666765553 27888888887776666666
Q ss_pred hc
Q psy2719 407 DS 408 (808)
Q Consensus 407 ~A 408 (808)
.+
T Consensus 104 ~~ 105 (130)
T TIGR00250 104 AR 105 (130)
T ss_pred Hc
Confidence 53
No 374
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=21.22 E-value=1e+02 Score=29.26 Aligned_cols=31 Identities=39% Similarity=0.500 Sum_probs=18.5
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
+-++|+||.|+.-.+. ..++. -+.++.+.+.
T Consensus 45 iAildL~G~~l~l~S~---R~~~~--~evi~~I~~~ 75 (138)
T PF04312_consen 45 IAILDLDGELLDLKSS---RNMSR--SEVIEWISEY 75 (138)
T ss_pred EEEEecCCcEEEEEee---cCCCH--HHHHHHHHHc
Confidence 5679999999875432 23332 3455555555
No 375
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=21.16 E-value=2.7e+02 Score=29.14 Aligned_cols=91 Identities=20% Similarity=0.260 Sum_probs=47.5
Q ss_pred HHHhhhhcCCCceEEEEecccccccCCC-CCCccCCCHHH--HHHHHHHhcCCCCccccccccccccccCCCCcccchHH
Q psy2719 532 LYLNNYVDGNCKLSLILDYDGTLTPLTS-HPDLAVMSEET--KRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEE 608 (808)
Q Consensus 532 ~~~~~y~~~~~~rli~~D~DGTLl~~~~-~~~~~~i~~~~--~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~ 608 (808)
..++.... +.+.+|++|.||-+...-. .|+...++.=. .+.+.++..... -...|| .|-..
T Consensus 149 ~~lA~~l~-Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~~--~~~~tg-------------gm~~K 212 (251)
T cd04242 149 ALVAGLVN-ADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMAGGSG--SSVGTG-------------GMRTK 212 (251)
T ss_pred HHHHHHcC-CCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHhcccC--cCcccC-------------CcHHH
Confidence 34565555 5677889999999976311 11212121111 233333321100 012233 33333
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
++..+..... |+.+.|++|+....+.+.+.
T Consensus 213 l~a~~~a~~~--gi~v~I~~g~~~~~i~~~l~ 242 (251)
T cd04242 213 LKAARIATEA--GIPVVIANGRKPDVLLDILA 242 (251)
T ss_pred HHHHHHHHHC--CCcEEEEcCCCCCHHHHHHc
Confidence 4444443333 78899999998877877764
No 376
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=20.78 E-value=4.3e+02 Score=28.33 Aligned_cols=90 Identities=26% Similarity=0.373 Sum_probs=49.4
Q ss_pred hhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchH
Q psy2719 528 DDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSE 607 (808)
Q Consensus 528 ~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~ 607 (808)
|.....++...+ +.+.++++|.||-+.+.. +|+ ..++.-..+.++++... ..++|.+ -.
T Consensus 183 D~~A~~lA~~l~-Ad~li~lTdv~Gv~~~~~-d~~-~~i~~i~~~e~~~l~~~-----g~~tGGM-------------~~ 241 (284)
T CHL00202 183 DVVAGEIAAKLN-AEKLILLTDTPGILADIN-DPN-SLISTLNIKEARNLAST-----GIISGGM-------------IP 241 (284)
T ss_pred HHHHHHHHHHhC-CCEEEEEeCChhhcCCCC-CCC-CccccccHHHHHHHHhc-----CCCCCCH-------------HH
Confidence 333444555554 567788899999997531 122 22222112233344322 1234444 34
Q ss_pred HHHHHHHHHhCCCCC-eEEEEeCCChhh-HHHhcC
Q psy2719 608 ETKRVLERLANMPDV-NIGIISGRTLEN-LMKMVN 640 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~-~v~I~SGR~~~~-l~~~~~ 640 (808)
.++.+++.+.. |+ .+.|++||.... +.+.|.
T Consensus 242 Kl~aa~~a~~~--Gv~~v~I~~g~~~~~ll~el~~ 274 (284)
T CHL00202 242 KVNCCIRALAQ--GVEAAHIIDGKEKHALLLEILT 274 (284)
T ss_pred HHHHHHHHHHc--CCCEEEEeCCCCCChHHHHHhc
Confidence 45556666655 55 478999998765 577775
Done!