Query psy2724
Match_columns 174
No_of_seqs 176 out of 1193
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 23:36:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2724.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2724hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 4.6E-47 1.6E-51 311.3 15.1 171 1-172 1-202 (427)
2 3qb0_A Actin-related protein 4 100.0 2.2E-45 7.4E-50 305.1 18.6 166 1-172 18-185 (498)
3 4fo0_A Actin-related protein 8 100.0 1.6E-43 5.6E-48 300.8 15.0 167 6-173 15-270 (593)
4 2fxu_A Alpha-actin-1, actin, a 100.0 2E-42 6.8E-47 280.0 16.4 170 3-172 2-171 (375)
5 1k8k_B ARP2, actin-like protei 100.0 1.2E-42 4E-47 283.0 2.1 171 3-173 3-176 (394)
6 1k8k_A ARP3, actin-like protei 100.0 4.2E-38 1.5E-42 257.6 16.9 167 4-172 3-186 (418)
7 4am6_A Actin-like protein ARP8 100.0 1.1E-35 3.6E-40 250.2 16.5 168 4-172 38-293 (655)
8 1jce_A ROD shape-determining p 99.9 5.9E-23 2E-27 163.8 14.9 157 6-171 3-169 (344)
9 3h1q_A Ethanolamine utilizatio 99.6 2.3E-14 7.8E-19 110.4 13.5 134 6-172 28-162 (272)
10 2v7y_A Chaperone protein DNAK; 99.5 1.3E-13 4.6E-18 115.2 11.3 146 7-167 3-179 (509)
11 3qfu_A 78 kDa glucose-regulate 99.4 5.2E-12 1.8E-16 101.8 12.5 148 6-166 18-223 (394)
12 3i33_A Heat shock-related 70 k 99.3 2.4E-11 8.3E-16 98.4 10.6 65 101-166 158-231 (404)
13 1dkg_D Molecular chaperone DNA 99.2 1.5E-10 5.2E-15 93.1 11.9 150 7-168 3-207 (383)
14 2fsj_A Hypothetical protein TA 99.1 8.5E-11 2.9E-15 93.8 7.2 152 7-170 22-213 (346)
15 1yuw_A Heat shock cognate 71 k 98.8 5.6E-08 1.9E-12 82.0 13.2 69 102-171 140-217 (554)
16 2kho_A Heat shock protein 70; 98.8 7.3E-08 2.5E-12 82.1 13.1 66 101-167 135-206 (605)
17 4gni_A Putative heat shock pro 98.8 5.5E-08 1.9E-12 78.8 11.0 66 100-166 149-222 (409)
18 4b9q_A Chaperone protein DNAK; 98.6 2.9E-07 9.8E-12 78.4 12.1 66 101-167 135-206 (605)
19 3d2f_A Heat shock protein homo 98.6 5.4E-07 1.9E-11 77.6 11.4 69 102-171 139-221 (675)
20 2ych_A Competence protein PILM 98.4 1.5E-05 5E-10 63.7 14.3 50 123-172 158-214 (377)
21 3js6_A Uncharacterized PARM pr 98.2 5.4E-06 1.9E-10 66.2 9.4 161 6-172 4-207 (355)
22 4apw_A ALP12; actin-like prote 98.1 1.3E-05 4.6E-10 63.2 8.0 158 5-172 6-195 (329)
23 2zgy_A Plasmid segregation pro 97.9 1.8E-05 6.3E-10 62.0 5.4 46 126-171 136-186 (320)
24 4a2a_A Cell division protein F 97.6 0.0013 4.6E-08 53.4 12.7 57 115-172 168-229 (419)
25 3hi0_A Putative exopolyphospha 95.6 0.16 5.4E-06 42.2 11.3 57 115-172 100-163 (508)
26 1t6c_A Exopolyphosphatase; alp 95.0 0.057 2E-06 42.1 6.4 57 114-171 96-160 (315)
27 3mdq_A Exopolyphosphatase; str 94.9 0.051 1.7E-06 42.4 6.0 55 116-171 90-153 (315)
28 3cer_A Possible exopolyphospha 94.9 0.064 2.2E-06 42.4 6.6 52 116-168 103-165 (343)
29 1u6z_A Exopolyphosphatase; alp 94.7 0.13 4.4E-06 42.8 8.4 56 115-171 96-159 (513)
30 3aap_A Ectonucleoside triphosp 93.9 0.67 2.3E-05 36.7 10.6 18 149-166 140-157 (353)
31 3cet_A Conserved archaeal prot 92.8 0.078 2.7E-06 41.7 3.4 23 149-171 127-149 (334)
32 2h3g_X Biosynthetic protein; p 90.8 1.6 5.5E-05 33.0 8.7 17 9-25 3-19 (268)
33 3djc_A Type III pantothenate k 89.7 5.1 0.00017 30.3 10.7 18 8-25 4-21 (266)
34 3zx3_A Ectonucleoside triphosp 88.5 3.2 0.00011 33.9 9.3 88 81-169 89-201 (452)
35 3bex_A Type III pantothenate k 86.6 8.2 0.00028 28.7 11.5 20 7-26 4-23 (249)
36 1zc6_A Probable N-acetylglucos 80.0 17 0.00058 27.4 11.3 86 80-171 53-144 (305)
37 1zbs_A Hypothetical protein PG 78.6 19 0.00064 27.0 13.1 68 103-171 62-131 (291)
38 2yhw_A Bifunctional UDP-N-acet 77.9 12 0.00041 28.8 8.3 47 123-171 126-179 (343)
39 1hux_A Activator of (R)-2-hydr 76.7 6.3 0.00021 29.6 6.1 38 135-172 79-119 (270)
40 1djx_A PLC-D1, phosphoinositid 75.9 2.5 8.5E-05 36.0 4.0 45 80-130 235-279 (624)
41 4ehu_A Activator of 2-hydroxyi 74.8 9.6 0.00033 28.3 6.7 39 132-170 73-115 (276)
42 4db3_A Glcnac kinase, N-acetyl 73.2 25 0.00085 26.9 8.9 50 120-171 112-168 (327)
43 2zkm_X 1-phosphatidylinositol- 72.4 4.1 0.00014 35.8 4.6 45 80-130 385-430 (799)
44 1zxo_A Conserved hypothetical 69.4 27 0.00091 26.1 8.2 53 119-171 75-129 (291)
45 3qr0_A Phospholipase C-beta (P 67.2 6.1 0.00021 34.8 4.6 46 80-131 394-439 (816)
46 2ch5_A NAGK protein; transfera 67.2 39 0.0013 25.7 11.1 80 80-161 49-133 (347)
47 2gup_A ROK family protein; sug 63.5 20 0.00067 26.7 6.4 50 119-171 86-140 (292)
48 3vov_A Glucokinase, hexokinase 63.0 46 0.0016 25.0 9.3 50 120-171 90-146 (302)
49 3d7j_A Uncharacterized protein 58.7 4.5 0.00015 27.9 1.8 50 73-128 65-115 (152)
50 2oba_A Probable 6-pyruvoyl tet 53.6 6.3 0.00022 26.7 1.8 50 73-129 65-114 (138)
51 2e2o_A Hexokinase; acetate and 47.6 83 0.0028 23.3 10.6 55 103-159 62-117 (299)
52 4htl_A Beta-glucoside kinase; 47.2 86 0.0029 23.4 10.9 49 121-171 90-145 (297)
53 2qm1_A Glucokinase; alpha-beta 46.7 54 0.0019 24.6 6.4 49 121-171 101-156 (326)
54 3lx3_A 6-pyruvoyl tetrahydrobi 45.5 34 0.0012 24.0 4.7 19 73-91 64-82 (180)
55 3ohm_B 1-phosphatidylinositol- 44.5 18 0.00063 32.1 3.7 45 80-130 389-434 (885)
56 1v31_A Hypothetical protein RA 41.4 27 0.00092 21.7 3.3 31 77-108 27-57 (93)
57 1nbw_A Glycerol dehydratase re 41.0 25 0.00087 29.7 3.9 35 137-171 392-431 (607)
58 2d0o_A DIOL dehydratase-reacti 40.7 26 0.00089 29.6 3.9 54 117-171 370-429 (610)
59 2aa4_A Mannac kinase, putative 39.5 81 0.0028 23.2 6.3 49 120-171 88-143 (289)
60 1y13_A PTPS, 6-pyruvoyl tetrah 39.4 34 0.0012 23.9 3.9 19 73-91 65-83 (181)
61 3vgl_A Glucokinase; ROK family 38.2 84 0.0029 23.7 6.3 50 120-171 88-144 (321)
62 1vhx_A Putative holliday junct 37.9 24 0.00082 24.0 2.8 20 6-25 3-22 (150)
63 1uhr_A SWI/SNF related, matrix 37.1 22 0.00076 22.1 2.4 30 78-108 28-57 (93)
64 3ifr_A Carbohydrate kinase, FG 36.3 19 0.00065 29.5 2.5 20 7-26 8-27 (508)
65 3cj1_A Ectonucleoside triphosp 35.0 26 0.00089 28.5 3.0 21 149-169 190-210 (456)
66 2ap1_A Putative regulator prot 34.9 95 0.0033 23.3 6.2 49 121-171 113-168 (327)
67 3cj1_A Ectonucleoside triphosp 32.5 20 0.00068 29.2 2.0 18 7-24 35-52 (456)
68 1b66_A 6-pyruvoyl tetrahydropt 30.7 15 0.00051 24.8 0.8 50 73-128 61-113 (140)
69 3r8e_A Hypothetical sugar kina 28.5 1.5E+02 0.005 22.3 6.2 49 121-171 110-166 (321)
70 3mdq_A Exopolyphosphatase; str 27.7 44 0.0015 25.5 3.1 24 5-28 130-153 (315)
71 1z05_A Transcriptional regulat 27.6 1.4E+02 0.0046 23.6 6.1 50 120-171 200-256 (429)
72 3cer_A Possible exopolyphospha 27.4 54 0.0018 25.4 3.6 59 74-141 254-329 (343)
73 1z6r_A MLC protein; transcript 27.3 1.4E+02 0.0047 23.3 6.0 49 121-171 179-234 (406)
74 2jpp_A Translational repressor 26.9 37 0.0012 20.1 1.9 25 3-30 15-39 (70)
75 1v32_A AT5G08430, hypothetical 26.0 61 0.0021 20.5 3.0 29 79-108 37-65 (101)
76 1vpz_A Carbon storage regulato 25.6 40 0.0014 20.1 1.9 22 3-24 27-48 (73)
77 2bti_A Carbon storage regulato 24.7 43 0.0015 19.3 1.9 22 3-24 17-38 (63)
78 3m5v_A DHDPS, dihydrodipicolin 24.4 82 0.0028 23.8 4.1 54 68-128 16-73 (301)
79 3a5f_A Dihydrodipicolinate syn 23.4 1.5E+02 0.005 22.2 5.3 53 68-127 10-66 (291)
80 2p3r_A Glycerol kinase; glycer 23.2 57 0.002 26.6 3.2 20 7-26 4-23 (510)
81 2joi_A Hypothetical protein TA 22.0 56 0.0019 21.3 2.2 24 69-92 25-48 (118)
82 2dpn_A Glycerol kinase; thermu 21.5 59 0.002 26.4 2.9 20 7-26 3-22 (495)
83 4e1j_A Glycerol kinase; struct 21.0 61 0.0021 26.6 2.9 20 7-26 27-46 (520)
84 3hz6_A Xylulokinase; xylulose, 20.9 61 0.0021 26.5 2.9 20 7-26 6-25 (511)
85 2nrh_A Transcriptional activat 20.7 34 0.0012 24.9 1.1 15 6-20 85-99 (219)
86 3h6e_A Carbohydrate kinase, FG 20.5 59 0.002 26.5 2.7 20 7-26 7-26 (482)
87 3l0q_A Xylulose kinase; xlylul 20.3 55 0.0019 27.1 2.5 21 6-26 5-25 (554)
88 1woq_A Inorganic polyphosphate 20.3 2.5E+02 0.0086 20.3 6.7 50 120-171 106-163 (267)
89 2uyt_A Rhamnulokinase; rhamnos 20.2 53 0.0018 26.5 2.3 18 7-24 5-22 (489)
90 3ll3_A Gluconate kinase; xylul 20.1 54 0.0018 26.8 2.4 20 7-26 5-24 (504)
91 1d8w_A L-rhamnose isomerase; b 20.1 34 0.0012 27.4 1.1 28 133-160 244-271 (426)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.6e-47 Score=311.33 Aligned_cols=171 Identities=44% Similarity=0.783 Sum_probs=151.3
Q ss_pred CCCCCCceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCC----------------------ccccCCCcceeecch
Q psy2724 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG----------------------VMVGMGQKDSYVGDE 58 (174)
Q Consensus 1 ~~~~~~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~----------------------~~~~~~~~~~~~g~~ 58 (174)
|. -+.++||||+||+++|+||||++.|++++||++|++++.. ...+..+++.++|++
T Consensus 1 m~-~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~e 79 (427)
T 3dwl_A 1 MA-SFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGND 79 (427)
T ss_dssp ---CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHH
T ss_pred CC-CCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchH
Confidence 44 4678999999999999999999999999999999987531 011334567899999
Q ss_pred hhhccC-cceeeccccCCeecCHHHHHHHHHHhhccccccCCCCCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeeh
Q psy2724 59 AQSKRG-ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137 (174)
Q Consensus 59 ~~~~~~-~~~~~~p~~~g~i~d~~~~~~l~~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~ 137 (174)
+...+. .+.+++|+++|+|.|||.+|++|+|+|++.|++++.++|++++||+++++..|++++|++||.|++|+++++.
T Consensus 80 a~~~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~ 159 (427)
T 3dwl_A 80 ALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAV 159 (427)
T ss_dssp HHHTHHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEE
T ss_pred HhhCcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecc
Confidence 987664 6889999999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred hhhHHhhhcC--------CCeEEEEecCCCceEEEeeeCCeec
Q psy2724 138 QAVLSLYASG--------RTTGIVLDSGDGVSHTVPIYEDHEG 172 (174)
Q Consensus 138 ~~~la~~~~g--------~~tglVVDiG~~~t~v~pV~dG~~~ 172 (174)
+++||+|++| ++||||||+|++.|+|+||++|++.
T Consensus 160 ~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l 202 (427)
T 3dwl_A 160 QAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVI 202 (427)
T ss_dssp HHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEEC
T ss_pred hHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEe
Confidence 9999999998 6899999999999999999999986
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-45 Score=305.06 Aligned_cols=166 Identities=28% Similarity=0.499 Sum_probs=155.5
Q ss_pred CCCCCCceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCCccccCCCcceeecch-hhhccCcceeeccccCCeecC
Q psy2724 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE-AQSKRGILTLKYPIEHGIITN 79 (174)
Q Consensus 1 ~~~~~~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~p~~~g~i~d 79 (174)
+++|+.++||||+||+++|+||+|++.|++++||++++++... ++..++|++ +...++.+.+++|+++|+|.|
T Consensus 18 yggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~d 91 (498)
T 3qb0_A 18 YGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRKDYELKPIIENGLVID 91 (498)
T ss_dssp -CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCTTEEEEESEETTEESC
T ss_pred cCCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcCceEEeccCcCCEEcc
Confidence 4679999999999999999999999999999999999987642 357799997 556677899999999999999
Q ss_pred HHHHHHHHHHhhccccccCCCCC-ceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCCCeEEEEecCC
Q psy2724 80 WDDMEKIWHHTFYNELRVAPEEH-PILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158 (174)
Q Consensus 80 ~~~~~~l~~~~~~~~L~~~~~~~-~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~~tglVVDiG~ 158 (174)
||.++++|+|+|.+.|++++.++ |++|+||+++++..|++++|++||.|++|+++++.+++|++||+|++||||||+|+
T Consensus 92 wd~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~ 171 (498)
T 3qb0_A 92 WDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGH 171 (498)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECS
T ss_pred HHHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCC
Confidence 99999999999988899999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeeeCCeec
Q psy2724 159 GVSHTVPIYEDHEG 172 (174)
Q Consensus 159 ~~t~v~pV~dG~~~ 172 (174)
+.|+|+||++|++.
T Consensus 172 g~T~vvPI~~G~~l 185 (498)
T 3qb0_A 172 DTCSVSPIVDGMTL 185 (498)
T ss_dssp SCEEEEEEETTEEC
T ss_pred CcEEEEEEeCCEEc
Confidence 99999999999986
No 3
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=300.79 Aligned_cols=167 Identities=20% Similarity=0.340 Sum_probs=147.6
Q ss_pred CceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCCcc----------------------------------------
Q psy2724 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM---------------------------------------- 45 (174)
Q Consensus 6 ~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~~~---------------------------------------- 45 (174)
+++||||+||+++|+||||++.|+. +|+++|+++.....
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 4589999999999999999999985 69999987542100
Q ss_pred ---------------------------------ccCCCcceeecchhhh--ccCcceeeccccCC-----------eecC
Q psy2724 46 ---------------------------------VGMGQKDSYVGDEAQS--KRGILTLKYPIEHG-----------IITN 79 (174)
Q Consensus 46 ---------------------------------~~~~~~~~~~g~~~~~--~~~~~~~~~p~~~g-----------~i~d 79 (174)
.....+++++|++|.. .++.+.+++||++| .+.|
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 0012346799999874 45678999999999 4789
Q ss_pred HHHHHHHHHHhhccccccCCCC---CceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCCCeEEEEec
Q psy2724 80 WDDMEKIWHHTFYNELRVAPEE---HPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 156 (174)
Q Consensus 80 ~~~~~~l~~~~~~~~L~~~~~~---~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~~tglVVDi 156 (174)
|+++|+||+|+|+++|++++++ ||+||+||+++++..|++|+|+|||+|+||+++++++++||+||+|++||||||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999999999998875 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEeeeCCeecC
Q psy2724 157 GDGVSHTVPIYEDHEGE 173 (174)
Q Consensus 157 G~~~t~v~pV~dG~~~~ 173 (174)
|++.|+|+||+||++..
T Consensus 254 G~~~T~v~PV~dG~~l~ 270 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHR 270 (593)
T ss_dssp CSSCEEEEEEESSCBCG
T ss_pred CCCceeeeeeECCEEeh
Confidence 99999999999999863
No 4
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=2e-42 Score=279.97 Aligned_cols=170 Identities=91% Similarity=1.395 Sum_probs=153.8
Q ss_pred CCCCceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCCccccCCCcceeecchhhhccCcceeeccccCCeecCHHH
Q psy2724 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 82 (174)
Q Consensus 3 ~~~~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~d~~~ 82 (174)
.|+.++||||+||+++|+||+|++.|++++||++++++......+...++.++|+++...++...+.+|+++|.|.||+.
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~ 81 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 81 (375)
T ss_dssp --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHH
T ss_pred CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHH
Confidence 36789999999999999999999999999999999988764333334467899999988788889999999999999999
Q ss_pred HHHHHHHhhccccccCCCCCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCCCeEEEEecCCCceE
Q psy2724 83 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 162 (174)
Q Consensus 83 ~~~l~~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~~tglVVDiG~~~t~ 162 (174)
++.+|+|+|++.|++++.++++++++|+++++.+|++++|++||.+++|+++++++|+||+|++|.++++|||+|++.|+
T Consensus 82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~ 161 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 161 (375)
T ss_dssp HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeCCeec
Q psy2724 163 TVPIYEDHEG 172 (174)
Q Consensus 163 v~pV~dG~~~ 172 (174)
|+||++|++.
T Consensus 162 v~~v~~G~~~ 171 (375)
T 2fxu_A 162 NVPIYEGYAL 171 (375)
T ss_dssp EEEEETTEEC
T ss_pred EeEeECCEEe
Confidence 9999999875
No 5
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=1.2e-42 Score=283.02 Aligned_cols=171 Identities=47% Similarity=0.875 Sum_probs=21.7
Q ss_pred CCCCceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCCcc-c-cCCCcceeecchhhhccCcceeeccccCCeecCH
Q psy2724 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-V-GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 80 (174)
Q Consensus 3 ~~~~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~~~-~-~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~d~ 80 (174)
..+.++||||+||+++|+||+|++.|++++||++++++..... . +...++.++|+++...++...+.+|+++|+|.||
T Consensus 3 ~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~dw 82 (394)
T 1k8k_B 3 SQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNW 82 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEecH
Confidence 4677899999999999999999999999999999988765321 1 2233678999999887778889999999999999
Q ss_pred HHHHHHHHHhh-ccccccCCCCCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCCCeEEEEecCCC
Q psy2724 81 DDMEKIWHHTF-YNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 159 (174)
Q Consensus 81 ~~~~~l~~~~~-~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~~tglVVDiG~~ 159 (174)
|.++.+|+|+| ++.|++++.++++++++|+++++..|++++|++||.|++|+++++++|+||+|++|+++|+|||+|++
T Consensus 83 d~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g 162 (394)
T 1k8k_B 83 DDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDG 162 (394)
T ss_dssp -----------------------------------------------------------------------CCEEEECSS
T ss_pred HHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCC
Confidence 99999999999 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeeeCCeecC
Q psy2724 160 VSHTVPIYEDHEGE 173 (174)
Q Consensus 160 ~t~v~pV~dG~~~~ 173 (174)
.|+|+||++|++..
T Consensus 163 ~T~v~pv~~G~~~~ 176 (394)
T 1k8k_B 163 VTHICPVYEGFSLP 176 (394)
T ss_dssp CEEEECEETTEECS
T ss_pred ceEeeeeECCEEcc
Confidence 99999999999853
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=4.2e-38 Score=257.65 Aligned_cols=167 Identities=44% Similarity=0.759 Sum_probs=148.3
Q ss_pred CCCceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCCc--------cccCCCcceeecchhhhccCcceeeccccCC
Q psy2724 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV--------MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75 (174)
Q Consensus 4 ~~~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g 75 (174)
.+.++||||+||+++|+||+|++.|++++||++++++.... ..+...+++++|+++...+ .+.+.+|+++|
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~-~~~~~~pi~~G 81 (418)
T 1k8k_A 3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP-TYATKWPIRHG 81 (418)
T ss_dssp CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT-TSEEECCEETT
T ss_pred CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcC-CCEEeccccCC
Confidence 45789999999999999999999999999999998876421 1112234589999998765 48899999999
Q ss_pred eecCHHHHHHHHHHhhccccccCCCCCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhh---------c
Q psy2724 76 IITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA---------S 146 (174)
Q Consensus 76 ~i~d~~~~~~l~~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~---------~ 146 (174)
.+.|||.++.+|+|+|.+.|+++++++++++++|+++++..|+++.|++||.+++++++++++|+||+|+ .
T Consensus 82 ~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~ 161 (418)
T 1k8k_A 82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER 161 (418)
T ss_dssp EESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred EECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence 9999999999999999888999999999999999999999999999999999999999999999999999 5
Q ss_pred CCCeEEEEecCCCceEEEeeeCCeec
Q psy2724 147 GRTTGIVLDSGDGVSHTVPIYEDHEG 172 (174)
Q Consensus 147 g~~tglVVDiG~~~t~v~pV~dG~~~ 172 (174)
|+ +|+|||+|++.|+|+||++|++.
T Consensus 162 ~~-~glVvDiG~gtt~v~~v~~G~~~ 186 (418)
T 1k8k_A 162 TL-TGTVIDSGDGVTHVIPVAEGYVI 186 (418)
T ss_dssp CC-CEEEEEESSSCEEEEEEETTEEC
T ss_pred CC-eEEEEEcCCCceEEEEeECCEEc
Confidence 66 99999999999999999999874
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=1.1e-35 Score=250.20 Aligned_cols=168 Identities=21% Similarity=0.361 Sum_probs=148.3
Q ss_pred CCCceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCC---------Cc------------------------------
Q psy2724 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ---------GV------------------------------ 44 (174)
Q Consensus 4 ~~~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~---------~~------------------------------ 44 (174)
|..++|||..||.++|+|+|.|..|. .+|++++++... ..
T Consensus 38 ~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k 116 (655)
T 4am6_A 38 DPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYK 116 (655)
T ss_dssp CGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcC
Confidence 66889999999999999999999998 569999965321 00
Q ss_pred ----c------------------cc---------C-CCcceeecchhhh-ccCcceeeccccCCeec----C-------H
Q psy2724 45 ----M------------------VG---------M-GQKDSYVGDEAQS-KRGILTLKYPIEHGIIT----N-------W 80 (174)
Q Consensus 45 ----~------------------~~---------~-~~~~~~~g~~~~~-~~~~~~~~~p~~~g~i~----d-------~ 80 (174)
. .. . ..++.++|++|.. .++.+.+++|+++|+|. | |
T Consensus 117 ~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~W 196 (655)
T 4am6_A 117 RKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELI 196 (655)
T ss_dssp CCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHH
T ss_pred CCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccH
Confidence 0 00 0 1146789999987 57789999999999998 8 9
Q ss_pred HHHHHHHHHhhcc-ccccCCC---CCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcC-CCeEEEEe
Q psy2724 81 DDMEKIWHHTFYN-ELRVAPE---EHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG-RTTGIVLD 155 (174)
Q Consensus 81 ~~~~~l~~~~~~~-~L~~~~~---~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g-~~tglVVD 155 (174)
|.++++|+|+|.+ +|++++. ++|++|+||+++++..|++++|++||.|++|+++++.+++||+||+| +++|||||
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVD 276 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVN 276 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEE
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEc
Confidence 9999999999974 8999986 89999999999999999999999999999999999999999999999 79999999
Q ss_pred cCCCceEEEeeeCCeec
Q psy2724 156 SGDGVSHTVPIYEDHEG 172 (174)
Q Consensus 156 iG~~~t~v~pV~dG~~~ 172 (174)
+|++.|+|+||++|++.
T Consensus 277 iG~g~T~VvPV~eG~vl 293 (655)
T 4am6_A 277 IGAAETRIACVDEGTVL 293 (655)
T ss_dssp ECSSCEEEEEEETTEEC
T ss_pred CCCceEEEEEEeCCEEE
Confidence 99999999999999985
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.90 E-value=5.9e-23 Score=163.76 Aligned_cols=157 Identities=12% Similarity=0.091 Sum_probs=131.4
Q ss_pred CceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCCccccCCCcceeecchhhhcc----CcceeeccccCCeecCHH
Q psy2724 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GILTLKYPIEHGIITNWD 81 (174)
Q Consensus 6 ~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~p~~~g~i~d~~ 81 (174)
..+|+||+||.++|+|+.++. |...+||+++..+.. .+.+++|+++.... ....+.+|+++|.+.||+
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~ 74 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYT 74 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHH
T ss_pred CceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChH
Confidence 368999999999999998865 777789999887542 13468999987532 345667999999999999
Q ss_pred HHHHHHHHhhccccccC-CCCCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCC-----CeEEEEe
Q psy2724 82 DMEKIWHHTFYNELRVA-PEEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLD 155 (174)
Q Consensus 82 ~~~~l~~~~~~~~L~~~-~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~-----~tglVVD 155 (174)
..+.+|.+++.+..... ..+.++++++|..++..+|+.+.+ ++|..|++.+.++.+|.+|+++++. .+.+|||
T Consensus 75 ~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvD 153 (344)
T 1jce_A 75 VALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILD-AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVD 153 (344)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEE
T ss_pred HHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEE
Confidence 99999999994322222 346899999999999999999988 5799999999999999999999985 6899999
Q ss_pred cCCCceEEEeeeCCee
Q psy2724 156 SGDGVSHTVPIYEDHE 171 (174)
Q Consensus 156 iG~~~t~v~pV~dG~~ 171 (174)
+|++.|+++++..|.+
T Consensus 154 iGggttdvsv~~~~~~ 169 (344)
T 1jce_A 154 IGGGTTEVAVISLGSI 169 (344)
T ss_dssp ECSSCEEEEEEETTEE
T ss_pred eCCCeEEEEEEEcCCE
Confidence 9999999999998865
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.59 E-value=2.3e-14 Score=110.37 Aligned_cols=134 Identities=16% Similarity=0.115 Sum_probs=100.6
Q ss_pred CceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCCccccCCCcceeecchhhhccCcceeeccccCCeecCHHHHHH
Q psy2724 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEK 85 (174)
Q Consensus 6 ~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~d~~~~~~ 85 (174)
.-.++||+||+++|+....++. ..++.. ..-..|+++|.+.||+..+.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~------~~l~~~--------------------------~~~~~~l~~g~i~d~~~~~~ 75 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEG------IPVAGA--------------------------LKWASVVKDGLVVDYIGAIQ 75 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTC------CEEEEE--------------------------EEECCCCBTTBCTTHHHHHH
T ss_pred CEEEEEEcccceEEEEEECCCC------cEEEEE--------------------------eecccccCCCEEEcHHHHHH
Confidence 3478999999999998843221 112211 11235889999999999999
Q ss_pred HHHHhhcccccc-CCCCCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCCCeEEEEecCCCceEEE
Q psy2724 86 IWHHTFYNELRV-APEEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 164 (174)
Q Consensus 86 l~~~~~~~~L~~-~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~~tglVVDiG~~~t~v~ 164 (174)
+|++++...... ......++++.|.......|+ ..+.++|.++++...+..++.++++++|..+++|||+|++.|.++
T Consensus 76 ~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~-~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~ 154 (272)
T 3h1q_A 76 IVRELKAKVERLLGSELFQAATAIPPGTVGRNAE-ACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIA 154 (272)
T ss_dssp HHHHHHHHHHHHSSSCCCEEEEECCSCC---CTT-HHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHH-HHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEE
Confidence 999998543332 222345667777766655555 556688999999999999999999999999999999999999999
Q ss_pred eeeCCeec
Q psy2724 165 PIYEDHEG 172 (174)
Q Consensus 165 pV~dG~~~ 172 (174)
++.+|.+.
T Consensus 155 ~~~~g~~~ 162 (272)
T 3h1q_A 155 VIEKGKIT 162 (272)
T ss_dssp EEETTEEE
T ss_pred EEECCEEE
Confidence 99999763
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.50 E-value=1.3e-13 Score=115.21 Aligned_cols=146 Identities=15% Similarity=0.166 Sum_probs=108.6
Q ss_pred ceEEEECCCccEEEeeeCCCCCCCC--------CCceeEEeCCCCccccCCCcceeecchhhhcc--Cc---ceee----
Q psy2724 7 AALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR--GI---LTLK---- 69 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~---~~~~---- 69 (174)
.+|.||+||.+++++++.+..|.++ +||+++.. + ...++|+++.... .. ..+.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~-~---------~~~~vG~~A~~~~~~~p~~~~~~Kr~lg 72 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK-N---------GERLVGEVAKRQAITNPNTIISIKRHMG 72 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES-S---------SSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC-C---------CcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence 5899999999999999987777655 78888772 1 3567898876421 11 1122
Q ss_pred cccc---CCeecCHHHHHHHHHHhhccccc------cCCCCCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhh
Q psy2724 70 YPIE---HGIITNWDDMEKIWHHTFYNELR------VAPEEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 140 (174)
Q Consensus 70 ~p~~---~g~i~d~~~~~~l~~~~~~~~L~------~~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~ 140 (174)
+|++ +|. +|+ .++++.++| ++|+ .......++++.|..++..+|+.+.+. ++..|++.+.++++|.
T Consensus 73 ~p~~~~~~g~--~~~-~~ei~a~~L-~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~ 147 (509)
T 2v7y_A 73 TDYKVEIEGK--QYT-PQEISAIIL-QYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPT 147 (509)
T ss_dssp SCCCEEETTE--EEC-HHHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHH
T ss_pred CCcEEEECCE--EEc-HHHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHH
Confidence 2665 664 444 445555555 2332 122346899999999999999998885 5889999999999999
Q ss_pred HHhhhcCC-----CeEEEEecCCCceEEEeee
Q psy2724 141 LSLYASGR-----TTGIVLDSGDGVSHTVPIY 167 (174)
Q Consensus 141 la~~~~g~-----~tglVVDiG~~~t~v~pV~ 167 (174)
||++++|. .+.+|+|+|++.++++.+.
T Consensus 148 AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~ 179 (509)
T 2v7y_A 148 AAALAYGLDKEEDQTILVYDLGGGTFDVSILE 179 (509)
T ss_dssp HHHHHTTGGGSCSEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHhhccCCCCEEEEEECCCCeEEEEEEE
Confidence 99999875 5899999999999999665
No 11
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.38 E-value=5.2e-12 Score=101.81 Aligned_cols=148 Identities=15% Similarity=0.125 Sum_probs=97.5
Q ss_pred CceEEEECCCccEEEeeeCCCCCCCC--------CCceeEEeCCCCccccCCCcceeecchhhhc--cCcceeeccccCC
Q psy2724 6 VAALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK--RGILTLKYPIEHG 75 (174)
Q Consensus 6 ~~~vViD~Gs~~~k~G~~g~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~p~~~g 75 (174)
..+|.||+||.++++++..+..|..+ +||+++... +..++|+++... .......+.+++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~----------~~~~vG~~A~~~~~~~~~~~~~~~k~~ 87 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTD----------DERLIGDAAKNQVAANPQNTIFDIKRL 87 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECS----------SCEEESHHHHHTGGGCGGGEECCGGGT
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeC----------CcEEecHHHHHhhHhCcccCHHHHHHH
Confidence 46799999999999999987666543 266665532 245677766421 1111111111111
Q ss_pred e--------------------------------------ecC-HHHHHHHHHHhhc---cccccCCCCCceEEeeCCCCC
Q psy2724 76 I--------------------------------------ITN-WDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNP 113 (174)
Q Consensus 76 ~--------------------------------------i~d-~~~~~~l~~~~~~---~~L~~~~~~~~vll~e~~~~~ 113 (174)
. ... .+....+++++.. ..++ ..-..++++.|..++
T Consensus 88 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~--~~~~~~vitvP~~~~ 165 (394)
T 3qfu_A 88 IGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLG--TKVTHAVVTVPAYFN 165 (394)
T ss_dssp TTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCC
T ss_pred hCCCCCcHHHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcC--CCcceEEEEECCCCC
Confidence 1 111 1222333333321 1222 234689999999999
Q ss_pred hHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCCC------eEEEEecCCCceEEEee
Q psy2724 114 KANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPI 166 (174)
Q Consensus 114 ~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~~------tglVVDiG~~~t~v~pV 166 (174)
..+|+.+.+.+ +..|++.+.++.+|.|++++++.. +-+|+|+|++.|+++.+
T Consensus 166 ~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~ 223 (394)
T 3qfu_A 166 DAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLL 223 (394)
T ss_dssp HHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEE
Confidence 99999887766 889999999999999999988643 45999999999988765
No 12
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.27 E-value=2.4e-11 Score=98.36 Aligned_cols=65 Identities=12% Similarity=0.140 Sum_probs=57.0
Q ss_pred CCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCCC---------eEEEEecCCCceEEEee
Q psy2724 101 EHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT---------TGIVLDSGDGVSHTVPI 166 (174)
Q Consensus 101 ~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~~---------tglVVDiG~~~t~v~pV 166 (174)
-..++++.|..++..+|+.+.+. ++..|++.+.++.+|.+|+++++.. +-+|+|+|++.|+++.+
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEE
T ss_pred CCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEE
Confidence 45799999999999999988766 7889999999999999999988643 45999999999999866
No 13
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.20 E-value=1.5e-10 Score=93.05 Aligned_cols=150 Identities=17% Similarity=0.149 Sum_probs=98.6
Q ss_pred ceEEEECCCccEEEeeeCCCCCCCC--------CCceeEEeCCCCccccCCCcceeecchhhhcc--Cc-cee-------
Q psy2724 7 AALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR--GI-LTL------- 68 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~-~~~------- 68 (174)
..|-||+||.++++++..+..|.++ +||+++...+ ...++|.++.... .. ..+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~---------~~~~~G~~A~~~~~~~~~~~~~~~k~~l 73 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTT---------SCEEESHHHHTTSTTCGGGEEECGGGTT
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECC---------CCEEECHHHHHhhhhCccceeehhHHhh
Confidence 4788999999999998854444433 5787766432 2234555443110 00 000
Q ss_pred --------------ecccc-------------CCee-cCHHHHHHHHHHhhc---cccccCCCCCceEEeeCCCCChHHH
Q psy2724 69 --------------KYPIE-------------HGII-TNWDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANR 117 (174)
Q Consensus 69 --------------~~p~~-------------~g~i-~d~~~~~~l~~~~~~---~~L~~~~~~~~vll~e~~~~~~~~r 117 (174)
..|+. +|.. .-.+....+++++.. ..++ .....++++.|..++..+|
T Consensus 74 g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r 151 (383)
T 1dkg_D 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR 151 (383)
T ss_dssp TCBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHH
Confidence 01221 2322 223334445555442 1232 2345799999999999999
Q ss_pred HHHHHHhhhhcCCCeeeeehhhhHHhhhcCC------CeEEEEecCCCceEEEeeeC
Q psy2724 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYE 168 (174)
Q Consensus 118 ~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~------~tglVVDiG~~~t~v~pV~d 168 (174)
+.+.+. ++..|++.+.++.+|.+++++++. .+.+|+|+|++.|+++.+..
T Consensus 152 ~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~ 207 (383)
T 1dkg_D 152 QATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEI 207 (383)
T ss_dssp HHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEE
T ss_pred HHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEE
Confidence 998876 588999999999999999998764 37899999999999997764
No 14
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.13 E-value=8.5e-11 Score=93.75 Aligned_cols=152 Identities=14% Similarity=0.133 Sum_probs=105.3
Q ss_pred ceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCCcccc--------C------CCcceeecchhhhccCcceeeccc
Q psy2724 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--------M------GQKDSYVGDEAQSKRGILTLKYPI 72 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~~~~~--------~------~~~~~~~g~~~~~~~~~~~~~~p~ 72 (174)
-.+-||+|+.++|+-. ++ .-.+.+||+++.........+ . ..+.+++|+++. +|+
T Consensus 22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l 90 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQ 90 (346)
T ss_dssp EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCS
T ss_pred EEEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------ccc
Confidence 4589999999999953 32 224568999987654311000 0 124566776653 789
Q ss_pred cCCeecCHHHHHHHHHHhhcccc-ccCCCCCceE--EeeCCCCChHHHHHHHHHhhhh-------------cCCCeeeee
Q psy2724 73 EHGIITNWDDMEKIWHHTFYNEL-RVAPEEHPIL--LTEAPLNPKANREKMTQIMFET-------------FNTPAMYVA 136 (174)
Q Consensus 73 ~~g~i~d~~~~~~l~~~~~~~~L-~~~~~~~~vl--l~e~~~~~~~~r~~l~e~lFE~-------------~~~~sv~~~ 136 (174)
+.|.+.| +..+.++.+.+.+.. .....+..++ ++.|......+|+.+.+.+... +++..+.++
T Consensus 91 ~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li 169 (346)
T 2fsj_A 91 GDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMR 169 (346)
T ss_dssp STTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEE
T ss_pred CCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEE
Confidence 9999998 777778777774432 1112345688 8999888888888887775442 235678999
Q ss_pred hhhhHHhhhc--C-----C-CeEEEEecCCCceEEEeee--CCe
Q psy2724 137 IQAVLSLYAS--G-----R-TTGIVLDSGDGVSHTVPIY--EDH 170 (174)
Q Consensus 137 ~~~~la~~~~--g-----~-~tglVVDiG~~~t~v~pV~--dG~ 170 (174)
++|.+|++++ + . .+-+|||+|++.|.++-+. +|.
T Consensus 170 ~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~ 213 (346)
T 2fsj_A 170 PQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME 213 (346)
T ss_dssp ETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE
T ss_pred ccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE
Confidence 9999999974 2 1 4459999999999999887 665
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=98.83 E-value=5.6e-08 Score=82.01 Aligned_cols=69 Identities=10% Similarity=0.060 Sum_probs=59.7
Q ss_pred CceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCC-------CeEEEEecCCCceEEEeee--CCee
Q psy2724 102 HPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EDHE 171 (174)
Q Consensus 102 ~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~-------~tglVVDiG~~~t~v~pV~--dG~~ 171 (174)
..++++.|..++..+|+.+.+ +++..|++.+.++.+|.+|++++|. .+.+|+|+|++.++++.+. +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~ 217 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIF 217 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcE
Confidence 579999999999999998877 5688999999999999999988762 5789999999999999775 5653
No 16
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=98.80 E-value=7.3e-08 Score=82.08 Aligned_cols=66 Identities=17% Similarity=0.060 Sum_probs=56.8
Q ss_pred CCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCC------CeEEEEecCCCceEEEeee
Q psy2724 101 EHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIY 167 (174)
Q Consensus 101 ~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~------~tglVVDiG~~~t~v~pV~ 167 (174)
-..++++.|..+...+|+.+.+. .+..|++.+.++++|.||++++|. .+.+|+|+|++.++++.+.
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIE 206 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEE
T ss_pred CcEEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEE
Confidence 35789999999999999888765 477899999999999999998863 3579999999999998775
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.77 E-value=5.5e-08 Score=78.78 Aligned_cols=66 Identities=9% Similarity=0.075 Sum_probs=55.8
Q ss_pred CCCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCCC--------eEEEEecCCCceEEEee
Q psy2724 100 EEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 166 (174)
Q Consensus 100 ~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~~--------tglVVDiG~~~t~v~pV 166 (174)
....++++.|..+...+|+.+.+. .+..|+..+.++.+|.+|+++++.. +.+|+|+|++.|.++-+
T Consensus 149 ~~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~ 222 (409)
T 4gni_A 149 KVTSAVITIPTNFTEKQKAALIAA-AAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVL 222 (409)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEE
T ss_pred CCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEE
Confidence 345799999999999988876665 5778999999999999999988754 58999999999999764
No 18
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.64 E-value=2.9e-07 Score=78.43 Aligned_cols=66 Identities=17% Similarity=0.060 Sum_probs=55.6
Q ss_pred CCceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCC------CeEEEEecCCCceEEEeee
Q psy2724 101 EHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIY 167 (174)
Q Consensus 101 ~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~------~tglVVDiG~~~t~v~pV~ 167 (174)
-..++++.|..++..+|+.+.+. .+..|++.+.++++|.||++++|. .+-+|+|+|++.+.++-+-
T Consensus 135 v~~~VITVPa~f~~~qr~a~~~A-a~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 4b9q_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIE 206 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEE
Confidence 45789999999999999876554 577899999999999999988752 5679999999999998664
No 19
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.56 E-value=5.4e-07 Score=77.65 Aligned_cols=69 Identities=7% Similarity=0.051 Sum_probs=58.0
Q ss_pred CceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcC------------CCeEEEEecCCCceEEEeee--
Q psy2724 102 HPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG------------RTTGIVLDSGDGVSHTVPIY-- 167 (174)
Q Consensus 102 ~~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g------------~~tglVVDiG~~~t~v~pV~-- 167 (174)
..++++.|..++..+|+.+.+. .+..|++.+.++++|.+|++++| ..+.+|+|+|++.+.++-+-
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~A-a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADA-ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 5789999999999999988774 57789999999999999998764 24689999999999998764
Q ss_pred CCee
Q psy2724 168 EDHE 171 (174)
Q Consensus 168 dG~~ 171 (174)
+|..
T Consensus 218 ~g~~ 221 (675)
T 3d2f_A 218 KGQL 221 (675)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 5643
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.35 E-value=1.5e-05 Score=63.70 Aligned_cols=50 Identities=16% Similarity=0.150 Sum_probs=42.0
Q ss_pred HhhhhcCCCeeeeehhhhHHhhhcC-------CCeEEEEecCCCceEEEeeeCCeec
Q psy2724 123 IMFETFNTPAMYVAIQAVLSLYASG-------RTTGIVLDSGDGVSHTVPIYEDHEG 172 (174)
Q Consensus 123 ~lFE~~~~~sv~~~~~~~la~~~~g-------~~tglVVDiG~~~t~v~pV~dG~~~ 172 (174)
-+++..|++-..+..+|+++++++| ....+|||+|++.|+++.+.+|.+.
T Consensus 158 ~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~ 214 (377)
T 2ych_A 158 EALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL 214 (377)
T ss_dssp HHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE
T ss_pred HHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE
Confidence 3458899999999999999988764 2456999999999999999998753
No 21
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.24 E-value=5.4e-06 Score=66.18 Aligned_cols=161 Identities=15% Similarity=0.172 Sum_probs=96.3
Q ss_pred CceEEEECCCccEEEeeeCCCCCCCCCCceeEEeCCCCc-c--------------ccCCCcc-eeecchhhhccCcceee
Q psy2724 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV-M--------------VGMGQKD-SYVGDEAQSKRGILTLK 69 (174)
Q Consensus 6 ~~~vViD~Gs~~~k~G~~g~~~P~~~~ps~~~~~~~~~~-~--------------~~~~~~~-~~~g~~~~~~~~~~~~~ 69 (174)
+-.+-+|+|-+++|+ ..++ . .+.|||.++....... . ....... +++|+.+...... ..
T Consensus 4 ~~iigiD~G~~~~K~-~~~~-~-~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~--~~ 78 (355)
T 3js6_A 4 VYVMALDFGNGFVKG-KIND-E-KFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT--GK 78 (355)
T ss_dssp EEEEEEEECSSEEEE-EETT-E-EEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC--CE
T ss_pred cEEEEEEcCCCcEEE-ecCC-e-EEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc--cc
Confidence 457889999999996 5544 2 4678999986543221 0 0112345 7789877532111 11
Q ss_pred ccc-cCCeecCHHHHHHHHHHhhc---cccccCCCCCceEEeeCCCCChHHH-HHHHHHhhhh-----------cCCCee
Q psy2724 70 YPI-EHGIITNWDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANR-EKMTQIMFET-----------FNTPAM 133 (174)
Q Consensus 70 ~p~-~~g~i~d~~~~~~l~~~~~~---~~L~~~~~~~~vll~e~~~~~~~~r-~~l~e~lFE~-----------~~~~sv 133 (174)
+.. .+....+- ..+.++..++. ..++-+..+-.+++..|......+| +++.+.+... +.+..+
T Consensus 79 ~~~~~~~k~~~~-~~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V 157 (355)
T 3js6_A 79 DTASTNDRYDIK-SFKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGV 157 (355)
T ss_dssp ECCCSTTGGGSH-HHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEE
T ss_pred cccccCCcccCH-HHHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEE
Confidence 222 22333332 23333333331 1111111123567777776655555 4677766532 234689
Q ss_pred eeehhhhHHhhhcC-----------CCeEEEEecCCCceEEEeeeCCeec
Q psy2724 134 YVAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYEDHEG 172 (174)
Q Consensus 134 ~~~~~~~la~~~~g-----------~~tglVVDiG~~~t~v~pV~dG~~~ 172 (174)
.+.++|.+|+++.+ ..+-+|||+|+.+|.++.+.+|.+.
T Consensus 158 ~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~ 207 (355)
T 3js6_A 158 KIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRV 207 (355)
T ss_dssp EEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEEC
T ss_pred EEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEc
Confidence 99999999999875 4567999999999999988877763
No 22
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.05 E-value=1.3e-05 Score=63.19 Aligned_cols=158 Identities=11% Similarity=0.023 Sum_probs=94.9
Q ss_pred CCceEEEECCCccEEEeee--C---CCCCCCCCCceeEEeCCCC-------ccccCCCcceeecchhhhccCcceeeccc
Q psy2724 5 DVAALVVDNGSGMCKAGFA--G---DDAPRAVFPSIVGRPRHQG-------VMVGMGQKDSYVGDEAQSKRGILTLKYPI 72 (174)
Q Consensus 5 ~~~~vViD~Gs~~~k~G~~--g---~~~P~~~~ps~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~p~ 72 (174)
+.-.+-||+|-+++|+-.. + +..-+..|||.++...... .....+.+.+++|+.+.. +-.
T Consensus 6 ~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~--------~~~ 77 (329)
T 4apw_A 6 NEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVE--------DSS 77 (329)
T ss_dssp CEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSS--------CSG
T ss_pred CceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCccccc--------ccc
Confidence 3457889999999999653 2 1123456899887654321 111233466778876531 111
Q ss_pred cCCeecCHHHHHHHHHHhhccccccC-CCCCceEEeeCCCCC--hHHHHHHHHHhhhh-------------cCCCeeeee
Q psy2724 73 EHGIITNWDDMEKIWHHTFYNELRVA-PEEHPILLTEAPLNP--KANREKMTQIMFET-------------FNTPAMYVA 136 (174)
Q Consensus 73 ~~g~i~d~~~~~~l~~~~~~~~L~~~-~~~~~vll~e~~~~~--~~~r~~l~e~lFE~-------------~~~~sv~~~ 136 (174)
+... +-+....++-.++...++.. ..+-.+++..|...- .++|+++.+.+... +.+..+.+.
T Consensus 78 ~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~ 155 (329)
T 4apw_A 78 ETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIK 155 (329)
T ss_dssp GGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEE
T ss_pred cCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEE
Confidence 1111 22344445555553344332 123446666665432 23566666665521 224578889
Q ss_pred hhhhHHhhhcC----CCeEEEEecCCCceEEEeeeCCeec
Q psy2724 137 IQAVLSLYASG----RTTGIVLDSGDGVSHTVPIYEDHEG 172 (174)
Q Consensus 137 ~~~~la~~~~g----~~tglVVDiG~~~t~v~pV~dG~~~ 172 (174)
+++..+++... ..+.+|||+|++.|.++.+.+|.+.
T Consensus 156 pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~ 195 (329)
T 4apw_A 156 AEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVN 195 (329)
T ss_dssp EHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEEC
T ss_pred eccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEe
Confidence 99999998762 4677999999999999999998764
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=97.85 E-value=1.8e-05 Score=61.97 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=37.6
Q ss_pred hhcCCCeeeeehhhhHHhhhcC-----CCeEEEEecCCCceEEEeeeCCee
Q psy2724 126 ETFNTPAMYVAIQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 126 E~~~~~sv~~~~~~~la~~~~g-----~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
+.+++..+.++++|++++++.+ ..+.+|||+|++.|.++-+.+|.+
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~ 186 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLS 186 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGC
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCee
Confidence 3455678889999999998763 457899999999999998888753
No 24
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=97.58 E-value=0.0013 Score=53.42 Aligned_cols=57 Identities=7% Similarity=-0.034 Sum_probs=45.2
Q ss_pred HHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcCC-----CeEEEEecCCCceEEEeeeCCeec
Q psy2724 115 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEDHEG 172 (174)
Q Consensus 115 ~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g~-----~tglVVDiG~~~t~v~pV~dG~~~ 172 (174)
...+.+.+ +++..|..-..+..+|++++++... .+.+|||+|++.|+++-+.+|.+.
T Consensus 168 ~~v~n~~~-~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~ 229 (419)
T 4a2a_A 168 KVYEMFYN-FLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPI 229 (419)
T ss_dssp HHHHHHHH-HHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEE
T ss_pred HHHHHHHH-HHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEE
Confidence 33344443 4678888888999999999998764 368999999999999999998763
No 25
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=95.57 E-value=0.16 Score=42.25 Aligned_cols=57 Identities=21% Similarity=0.223 Sum_probs=38.0
Q ss_pred HHHHHHHHHhhhhcCCCeeeee---hhhhHHhhh----cCCCeEEEEecCCCceEEEeeeCCeec
Q psy2724 115 ANREKMTQIMFETFNTPAMYVA---IQAVLSLYA----SGRTTGIVLDSGDGVSHTVPIYEDHEG 172 (174)
Q Consensus 115 ~~r~~l~e~lFE~~~~~sv~~~---~~~~la~~~----~g~~tglVVDiG~~~t~v~pV~dG~~~ 172 (174)
..++.+.+-+.+..|++ +.++ .++-++..| .....++|||+|.++|.++-+-+|.+.
T Consensus 100 ~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~ 163 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG 163 (508)
T ss_dssp TTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC
T ss_pred cCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee
Confidence 34455666666778877 3333 334443332 234578999999999999988887664
No 26
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=94.96 E-value=0.057 Score=42.12 Aligned_cols=57 Identities=16% Similarity=0.050 Sum_probs=37.9
Q ss_pred hHHHHHHHHHhhhhcCCCeeeee---hhhhHHhhh----cC-CCeEEEEecCCCceEEEeeeCCee
Q psy2724 114 KANREKMTQIMFETFNTPAMYVA---IQAVLSLYA----SG-RTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 114 ~~~r~~l~e~lFE~~~~~sv~~~---~~~~la~~~----~g-~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+.++.+.+.+-+..|++ +.++ .++.++..+ .+ ..+++|||+|.++|.++-.-+|.+
T Consensus 96 A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~ 160 (315)
T 1t6c_A 96 AKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKV 160 (315)
T ss_dssp STTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEE
T ss_pred CcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCce
Confidence 344566677777778876 3343 333333322 34 678999999999999998777765
No 27
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=94.90 E-value=0.051 Score=42.38 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=36.0
Q ss_pred HHHHHHHHhhhhcCCCeeeee---hhhhHHhhh----cC--CCeEEEEecCCCceEEEeeeCCee
Q psy2724 116 NREKMTQIMFETFNTPAMYVA---IQAVLSLYA----SG--RTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 116 ~r~~l~e~lFE~~~~~sv~~~---~~~~la~~~----~g--~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.++.+.+-+-+..|++ +.++ .++-++.++ .. ..+++|+|+|.++|.++-+-+|.+
T Consensus 90 N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~ 153 (315)
T 3mdq_A 90 NKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEI 153 (315)
T ss_dssp THHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCE
T ss_pred CHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeE
Confidence 3445666666778876 3333 334333332 22 367999999999999998877754
No 28
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=94.89 E-value=0.064 Score=42.35 Aligned_cols=52 Identities=23% Similarity=0.216 Sum_probs=34.0
Q ss_pred HHHHHHHHhhhhcCCCeeeee---hhhhHHhhhc----C----CCeEEEEecCCCceEEEeeeC
Q psy2724 116 NREKMTQIMFETFNTPAMYVA---IQAVLSLYAS----G----RTTGIVLDSGDGVSHTVPIYE 168 (174)
Q Consensus 116 ~r~~l~e~lFE~~~~~sv~~~---~~~~la~~~~----g----~~tglVVDiG~~~t~v~pV~d 168 (174)
.++.+.+-+-+..|++ +-++ .++-++..+. . ..+++|+|+|.++|.++-..+
T Consensus 103 N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~ 165 (343)
T 3cer_A 103 NREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGD 165 (343)
T ss_dssp THHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCC
T ss_pred CHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeec
Confidence 3455666666777776 3333 3444444433 2 256999999999999986655
No 29
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.74 E-value=0.13 Score=42.84 Aligned_cols=56 Identities=16% Similarity=0.123 Sum_probs=35.9
Q ss_pred HHHHHHHHHhhhhcCCCeeeee---hhhhHHhhhc----CC-CeEEEEecCCCceEEEeeeCCee
Q psy2724 115 ANREKMTQIMFETFNTPAMYVA---IQAVLSLYAS----GR-TTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 115 ~~r~~l~e~lFE~~~~~sv~~~---~~~~la~~~~----g~-~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
..++.+.+-+-+..|++ +-++ .++-++..|. .. ..++|+|+|.++|.++-.-+|.+
T Consensus 96 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~ 159 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEP 159 (513)
T ss_dssp TTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCee
Confidence 33455666677778876 3343 3333433332 22 37999999999999997766654
No 30
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=93.95 E-value=0.67 Score=36.65 Aligned_cols=18 Identities=22% Similarity=0.115 Sum_probs=15.9
Q ss_pred CeEEEEecCCCceEEEee
Q psy2724 149 TTGIVLDSGDGVSHTVPI 166 (174)
Q Consensus 149 ~tglVVDiG~~~t~v~pV 166 (174)
.+.+|+|+|.++|+++=.
T Consensus 140 ~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp SCEEEEEECSSEEEEEEE
T ss_pred ccEEEEEeCCCceEEEEe
Confidence 479999999999999854
No 31
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=92.83 E-value=0.078 Score=41.66 Aligned_cols=23 Identities=26% Similarity=0.473 Sum_probs=21.9
Q ss_pred CeEEEEecCCCceEEEeeeCCee
Q psy2724 149 TTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 149 ~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.++++||||...|.|+||.+|.+
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~p 149 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKV 149 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEE
T ss_pred CCEEEEEcCcchhhhhhhcCCee
Confidence 57999999999999999999987
No 32
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=90.80 E-value=1.6 Score=33.04 Aligned_cols=17 Identities=24% Similarity=0.350 Sum_probs=14.9
Q ss_pred EEEECCCccEEEeeeCC
Q psy2724 9 LVVDNGSGMCKAGFAGD 25 (174)
Q Consensus 9 vViD~Gs~~~k~G~~g~ 25 (174)
++||+|..++|.|+-.+
T Consensus 3 L~IDIGNT~ik~gl~~~ 19 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEE 19 (268)
T ss_dssp EEEEECSSEEEEEEEET
T ss_pred EEEEECcCcEEEEEEEC
Confidence 78999999999998753
No 33
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=89.70 E-value=5.1 Score=30.26 Aligned_cols=18 Identities=22% Similarity=0.322 Sum_probs=15.9
Q ss_pred eEEEECCCccEEEeeeCC
Q psy2724 8 ALVVDNGSGMCKAGFAGD 25 (174)
Q Consensus 8 ~vViD~Gs~~~k~G~~g~ 25 (174)
.++||+|..++|+|+-.+
T Consensus 4 lL~IDIGNT~iK~gl~d~ 21 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDG 21 (266)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECCCeEEEEEEEC
Confidence 589999999999998754
No 34
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=88.45 E-value=3.2 Score=33.93 Aligned_cols=88 Identities=11% Similarity=0.142 Sum_probs=45.3
Q ss_pred HHHHHHHHHhhcccccc-CCCCCceEEeeCCCC---C---hHHHHHHHHHhhhhc---CC--Ceeeeeh---hhhHHh--
Q psy2724 81 DDMEKIWHHTFYNELRV-APEEHPILLTEAPLN---P---KANREKMTQIMFETF---NT--PAMYVAI---QAVLSL-- 143 (174)
Q Consensus 81 ~~~~~l~~~~~~~~L~~-~~~~~~vll~e~~~~---~---~~~r~~l~e~lFE~~---~~--~sv~~~~---~~~la~-- 143 (174)
+.++.+++.+. +.... .-...|+.+.-..-. + ...++.+.+-+-+.+ ++ ..+.++. +++.+-
T Consensus 89 ~~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 89 AYLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 45666666655 22111 113567776654322 1 123444544443333 22 3566653 333322
Q ss_pred --hhcCC------CeEEEEecCCCceEEEeeeCC
Q psy2724 144 --YASGR------TTGIVLDSGDGVSHTVPIYED 169 (174)
Q Consensus 144 --~~~g~------~tglVVDiG~~~t~v~pV~dG 169 (174)
|..|. .+..++|+|.++|+|+=..++
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~ 201 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLN 201 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECCSS
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEeccCC
Confidence 33342 567788999999999855443
No 35
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=86.57 E-value=8.2 Score=28.70 Aligned_cols=20 Identities=25% Similarity=0.268 Sum_probs=16.7
Q ss_pred ceEEEECCCccEEEeeeCCC
Q psy2724 7 AALVVDNGSGMCKAGFAGDD 26 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~ 26 (174)
--++||+|..++|.|+-.+.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEEECSSEEEEEEESSS
T ss_pred eEEEEEECCCeEEEEEEECC
Confidence 45889999999999987543
No 36
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=79.99 E-value=17 Score=27.39 Aligned_cols=86 Identities=13% Similarity=0.191 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhhccccccCCCCC---ceEEeeCCCCChHHHHHHHHHhhhhc--CCCeeeeehhhhHHhhhc-CCCeEEE
Q psy2724 80 WDDMEKIWHHTFYNELRVAPEEH---PILLTEAPLNPKANREKMTQIMFETF--NTPAMYVAIQAVLSLYAS-GRTTGIV 153 (174)
Q Consensus 80 ~~~~~~l~~~~~~~~L~~~~~~~---~vll~e~~~~~~~~r~~l~e~lFE~~--~~~sv~~~~~~~la~~~~-g~~tglV 153 (174)
|+.+.++++.++ +..+.++.+- .+-+..|-......... +-+.+ +.| +++.+++-+++++. +..++++
T Consensus 53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~----l~~~~~~~~p-v~v~NDa~aaa~ge~~~~~~v~ 126 (305)
T 1zc6_A 53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGE----FESQAPGFAR-LSLATDGYTTLLGAHGGQPGII 126 (305)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHH----HHHTCCCCSE-EEEECHHHHHHHHHTTTSSEEE
T ss_pred HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHH----HHHhCCCCce-EEEECCHHHHHHhhcCCCCeEE
Confidence 455556666655 3334433332 35666665443332222 22234 344 88999999998874 5678899
Q ss_pred EecCCCceEEEeeeCCee
Q psy2724 154 LDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 154 VDiG~~~t~v~pV~dG~~ 171 (174)
|-+|.+..-..-+.+|..
T Consensus 127 v~~GTGigg~~i~~~G~~ 144 (305)
T 1zc6_A 127 VALGTGSIGEALYPDGSH 144 (305)
T ss_dssp EEESSSEEEEEECTTSCE
T ss_pred EEecCCeEEEEEeCCCcE
Confidence 999988632222236753
No 37
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=78.63 E-value=19 Score=27.04 Aligned_cols=68 Identities=15% Similarity=0.096 Sum_probs=45.8
Q ss_pred ceEEeeCCCCChHHHHHHHHHhhhhcCC-CeeeeehhhhHHhhh-cCCCeEEEEecCCCceEEEeeeCCee
Q psy2724 103 PILLTEAPLNPKANREKMTQIMFETFNT-PAMYVAIQAVLSLYA-SGRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 103 ~vll~e~~~~~~~~r~~l~e~lFE~~~~-~sv~~~~~~~la~~~-~g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+-+..|-.. +.....+.+.+-+.++. ..+.+.+++-+++++ .|..+++++=+|.+.--..-+.||.+
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~ 131 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIK 131 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcE
Confidence 3555566544 33233566666667775 358899999999998 47788999989888743333457765
No 38
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=77.95 E-value=12 Score=28.77 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=33.7
Q ss_pred HhhhhcCCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 123 IMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 123 ~lFE~~~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+-+.+++| +++.+++-+++++. +..+.++|-+|.+. -..-|.+|.+
T Consensus 126 ~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGi-G~gii~~G~l 179 (343)
T 2yhw_A 126 PLSDTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTGI-GGGIIHQHEL 179 (343)
T ss_dssp HHHHHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSSE-EEEEEETTEE
T ss_pred HHHHHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCCE-EEEEEECCEE
Confidence 334456888 78889988887753 45789999999874 4555678765
No 39
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=76.66 E-value=6.3 Score=29.56 Aligned_cols=38 Identities=8% Similarity=-0.070 Sum_probs=26.8
Q ss_pred eehhhhHHh---hhcCCCeEEEEecCCCceEEEeeeCCeec
Q psy2724 135 VAIQAVLSL---YASGRTTGIVLDSGDGVSHTVPIYEDHEG 172 (174)
Q Consensus 135 ~~~~~~la~---~~~g~~tglVVDiG~~~t~v~pV~dG~~~ 172 (174)
++.+..+.+ ........+|+|+|.+.+.++-+-+|.+.
T Consensus 79 ~v~Ei~ah~~ga~~~~~~~~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 79 QMSELSCHAMGASFIWPNVHTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp EECHHHHHHHHHHHHCTTCCEEEEEETTEEEEEEEETTEEE
T ss_pred CcccHHHHHHHHHHhCCCCCEEEEECCCceEEEEEeCCcee
Confidence 455555444 33344556799999999999999898764
No 40
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=75.91 E-value=2.5 Score=36.01 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhhccccccCCCCCceEEeeCCCCChHHHHHHHHHhhhhcCC
Q psy2724 80 WDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNT 130 (174)
Q Consensus 80 ~~~~~~l~~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~ 130 (174)
-+.++.|=+|+|. .+++||+|+-..+++.+++++|++++-|.||=
T Consensus 235 ~~v~~~I~~~AF~------~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd 279 (624)
T 1djx_A 235 CDVLRAIRDYAFK------ASPYPVILSLENHCSLEQQRVMARHLRAILGP 279 (624)
T ss_dssp HHHHHHHHHHTTT------SCSSCEEEEEEEECCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc------CCCCCEEEEecccCCHHHHHHHHHHHHHHHhh
Confidence 3667788888883 47999999999999999999999999887763
No 41
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=74.78 E-value=9.6 Score=28.30 Aligned_cols=39 Identities=10% Similarity=0.048 Sum_probs=27.7
Q ss_pred eeeeehhhhHHhhhcC---CCeEEEEecCCCceEEEee-eCCe
Q psy2724 132 AMYVAIQAVLSLYASG---RTTGIVLDSGDGVSHTVPI-YEDH 170 (174)
Q Consensus 132 sv~~~~~~~la~~~~g---~~tglVVDiG~~~t~v~pV-~dG~ 170 (174)
.+..++.+.+++++.. ...-.|+|+|.+.++++-+ .+|.
T Consensus 73 ~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~ 115 (276)
T 4ehu_A 73 ADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGR 115 (276)
T ss_dssp CSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSC
T ss_pred CCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCc
Confidence 3556778887777653 4556899999999988766 3454
No 42
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=73.24 E-value=25 Score=26.89 Aligned_cols=50 Identities=14% Similarity=0.072 Sum_probs=35.7
Q ss_pred HHHHhhhhcCCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 120 MTQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 120 l~e~lFE~~~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
+.+.+-+.|++| +++.+++-+++++. +..+.++|-+|.+. -..-|.+|.+
T Consensus 112 l~~~l~~~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGi-G~gii~~G~l 168 (327)
T 4db3_A 112 LRADLEAKIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTGF-GGGLIYEGKV 168 (327)
T ss_dssp HHHHHHHHHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSE-EEEEEETTEE
T ss_pred HHHHHHHHHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCccc-eEEEEECCEE
Confidence 344555667888 88999999887753 35788899998774 3444667765
No 43
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=72.36 E-value=4.1 Score=35.79 Aligned_cols=45 Identities=20% Similarity=0.242 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhhccccccCCCCCceEEeeCCCC-ChHHHHHHHHHhhhhcCC
Q psy2724 80 WDDMEKIWHHTFYNELRVAPEEHPILLTEAPLN-PKANREKMTQIMFETFNT 130 (174)
Q Consensus 80 ~~~~~~l~~~~~~~~L~~~~~~~~vll~e~~~~-~~~~r~~l~e~lFE~~~~ 130 (174)
-+.++.|=+|+|. .+++||+|+-..++ +.+++++|++++-|.||=
T Consensus 385 ~~v~~~I~~~AF~------~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd 430 (799)
T 2zkm_X 385 KEAIEAIAESAFK------TSPYPIILSFENHVDSPRQQAKMAEYCRTIFGD 430 (799)
T ss_dssp HHHHHHHHHHTTS------SCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc------CCCCCEEEEccccCCCHHHHHHHHHHHHHHhhh
Confidence 3667788888883 48999999988888 899999999999887663
No 44
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=69.42 E-value=27 Score=26.13 Aligned_cols=53 Identities=9% Similarity=0.097 Sum_probs=37.2
Q ss_pred HHHHHhhhhcCC-CeeeeehhhhHHhhhc-CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 119 KMTQIMFETFNT-PAMYVAIQAVLSLYAS-GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 119 ~l~e~lFE~~~~-~sv~~~~~~~la~~~~-g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+.+.+=+.++. ..+.+.+++-+++++. |..++++|=+|.+..-.--+.+|.+
T Consensus 75 ~l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~ 129 (291)
T 1zxo_A 75 VLRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIV 129 (291)
T ss_dssp HHHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEE
T ss_pred HHHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcE
Confidence 455555566775 2488999999999865 6788888889887732333557764
No 45
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=67.24 E-value=6.1 Score=34.78 Aligned_cols=46 Identities=20% Similarity=0.185 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhhccccccCCCCCceEEeeCCCCChHHHHHHHHHhhhhcCCC
Q psy2724 80 WDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNTP 131 (174)
Q Consensus 80 ~~~~~~l~~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~~~ 131 (174)
.+.++.|=+|+|. .+++||+|+-..+++.+++++|++++-|.||=.
T Consensus 394 ~~v~~~I~~~AF~------~S~yPvIlslE~Hc~~~qQ~~ma~~~~~~~Gd~ 439 (816)
T 3qr0_A 394 KDVVYAIAESAFK------VSDYPVILSFENHCSVAQQKLLAQYCNEAFGEL 439 (816)
T ss_dssp HHHHHHHHHHTTS------SCCSCEEEEEEECCCHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhccc------CCCCCEEEEEecCCCHHHHHHHHHHHHHHhhhh
Confidence 4678888888883 479999999999999999999999998887743
No 46
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=67.20 E-value=39 Score=25.70 Aligned_cols=80 Identities=15% Similarity=0.205 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhhccccccCCC-C-CceEEeeCCCCChHHHHHHHHHhhhhcC---CCeeeeehhhhHHhhhcCCCeEEEE
Q psy2724 80 WDDMEKIWHHTFYNELRVAPE-E-HPILLTEAPLNPKANREKMTQIMFETFN---TPAMYVAIQAVLSLYASGRTTGIVL 154 (174)
Q Consensus 80 ~~~~~~l~~~~~~~~L~~~~~-~-~~vll~e~~~~~~~~r~~l~e~lFE~~~---~~sv~~~~~~~la~~~~g~~tglVV 154 (174)
|+.+.++++.++ +..+.++. + ..+-+..|-.........+.+.+=+.++ .| +++.+++-+++++....++++|
T Consensus 49 ~~~i~~~i~~~~-~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~~~~~v~v 126 (347)
T 2ch5_A 49 VERINEMVNRAK-RKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATATPDGGVVL 126 (347)
T ss_dssp HHHHHHHHHHHH-HHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHH-HhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhCCCCcEEE
Confidence 445556666555 23333322 2 3456666766555444566666666776 55 7889999988887534678888
Q ss_pred ecCCCce
Q psy2724 155 DSGDGVS 161 (174)
Q Consensus 155 DiG~~~t 161 (174)
-+|.+.-
T Consensus 127 ~~GTGig 133 (347)
T 2ch5_A 127 ISGTGSN 133 (347)
T ss_dssp EESSSEE
T ss_pred EEcCCce
Confidence 8887653
No 47
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=63.45 E-value=20 Score=26.75 Aligned_cols=50 Identities=10% Similarity=0.111 Sum_probs=38.9
Q ss_pred HHHHHhhhhcCCCeeeeehhhhHHhhhc-----CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 119 KMTQIMFETFNTPAMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 119 ~l~e~lFE~~~~~sv~~~~~~~la~~~~-----g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+.+.+ +.|++| +++.+++-+++++. +..+.++|-+|.+. -..-|.+|.+
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtGi-G~giv~~G~l 140 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTGI-GGAMIINGRL 140 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSSE-EEEEEETTEE
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCce-EEEEEECCEE
Confidence 356777 889998 88999999998873 56789999999874 4445678765
No 48
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=63.01 E-value=46 Score=25.01 Aligned_cols=50 Identities=16% Similarity=0.292 Sum_probs=34.6
Q ss_pred HHHHhhhhcCCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 120 MTQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 120 l~e~lFE~~~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
+.+.+-+.|++| +++.+++-+++++. +..+.++|-+|.+.- ..-|.+|.+
T Consensus 90 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG-~gii~~g~l 146 (302)
T 3vov_A 90 IRRILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIG-GGVVLGGRV 146 (302)
T ss_dssp HHHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEE-EEEEETTEE
T ss_pred hHHHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCcee-EEEEECCEE
Confidence 344455667888 78889988887643 457889999998743 334567765
No 49
>3d7j_A Uncharacterized protein SCO6650; T-fold, unknown function; 1.45A {Streptomyces coelicolor}
Probab=58.65 E-value=4.5 Score=27.86 Aligned_cols=50 Identities=12% Similarity=0.149 Sum_probs=31.4
Q ss_pred cCCeecCHHHHHHHHHHhhccccccCCCCCceEEeeCCC-CChHHHHHHHHHhhhhc
Q psy2724 73 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPL-NPKANREKMTQIMFETF 128 (174)
Q Consensus 73 ~~g~i~d~~~~~~l~~~~~~~~L~~~~~~~~vll~e~~~-~~~~~r~~l~e~lFE~~ 128 (174)
+.|++.|+..++++++.+. +.| |+..|.-.|.+ .....-|.+++++|+.+
T Consensus 65 ~~GmVvDF~~lK~~ik~i~-~~l-----DH~~Ln~~p~f~~~npTaEnlA~~i~~~L 115 (152)
T 3d7j_A 65 EDNIVVDIGLATQELGAVV-GAL-----NYRNLDNEPDFAGVNTSTEFLAKVIADRL 115 (152)
T ss_dssp TTSSSSCHHHHHHHHHHHH-HTT-----TTEEGGGCGGGTTSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHH-Hhc-----CCcccccccccCCCCCCHHHHHHHHHHHH
Confidence 5799999999999998866 333 22222212322 12334577888888765
No 50
>2oba_A Probable 6-pyruvoyl tetrahydrobiopterin synthase; tetrahydrobiopterin biosynthesis, PTP synthase, PTPS, lyase; 2.33A {Pseudomonas aeruginosa} PDB: 3qn0_A 3qn9_A 3qna_A*
Probab=53.64 E-value=6.3 Score=26.66 Aligned_cols=50 Identities=16% Similarity=0.410 Sum_probs=30.9
Q ss_pred cCCeecCHHHHHHHHHHhhccccccCCCCCceEEeeCCCCChHHHHHHHHHhhhhcC
Q psy2724 73 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFN 129 (174)
Q Consensus 73 ~~g~i~d~~~~~~l~~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~~ 129 (174)
+.|++.||..++++++.+. +.|. +..+.-.+++ ....-|.+++++++.+.
T Consensus 65 ~~GmV~Df~~lk~~~~~vi-~~lD-----H~~Lndv~~~-~~pTaEnlA~~i~~~L~ 114 (138)
T 2oba_A 65 HTGWIRDFAEIKAIFKPIY-EQLD-----HNYLNDIPGL-ENPTSENLCRWIWQQLK 114 (138)
T ss_dssp TTSSSSCHHHHHHHHHHHH-HHHT-----TSBGGGSTTC-SSCCHHHHHHHHHHHHG
T ss_pred CCCEEEeHHHHHHHHHHHH-HhCC-----CccchhcCCC-CCCCHHHHHHHHHHHHH
Confidence 4799999999999888766 3331 1111111222 23345778888888774
No 51
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=47.60 E-value=83 Score=23.28 Aligned_cols=55 Identities=22% Similarity=0.340 Sum_probs=36.4
Q ss_pred ceEEeeCCCCChHHHHHHHHHhhhhcCCCeeeeehhhhHHhhhcC-CCeEEEEecCCC
Q psy2724 103 PILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG-RTTGIVLDSGDG 159 (174)
Q Consensus 103 ~vll~e~~~~~~~~r~~l~e~lFE~~~~~sv~~~~~~~la~~~~g-~~tglVVDiG~~ 159 (174)
.+-+..|-..+......+.+.+=+ ++.| +++.+++-+++++.. ..+.++|-+|.+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~~~~~v~l~~GTG 117 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETLGEPGVVVIAGTG 117 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHTTSCEEEEEESSS
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccCCCCeEEEEecCC
Confidence 455666655433333345555544 7755 778889888888753 578899999988
No 52
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=47.22 E-value=86 Score=23.36 Aligned_cols=49 Identities=14% Similarity=0.107 Sum_probs=34.5
Q ss_pred HHHhhhhcCCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 121 TQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 121 ~e~lFE~~~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+.+-+.|++| +++.+++-+++++. +..+.++|-+|.+.- ..-|.+|.+
T Consensus 90 ~~~l~~~~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG-~giv~~G~l 145 (297)
T 4htl_A 90 KEWLEAETGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIG-GGIFSNGEL 145 (297)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE-EEEEETTEE
T ss_pred HHHHHHHHCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcceE-EEEEECCEE
Confidence 34444667888 88999988887643 457889999997753 444667765
No 53
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=46.65 E-value=54 Score=24.59 Aligned_cols=49 Identities=12% Similarity=0.135 Sum_probs=35.4
Q ss_pred HHHhhhhcCCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 121 TQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 121 ~e~lFE~~~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+.+=+.|++| +++.+++-+++++. +..+.++|-+|.+. -..-+.+|.+
T Consensus 101 ~~~l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGi-G~giv~~G~l 156 (326)
T 2qm1_A 101 KEQIESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTGV-GGGIVAAGKL 156 (326)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EEEEEETTEE
T ss_pred HHHHHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCce-EEEEEECCEE
Confidence 33444556887 88899998888752 45789999999884 4555678765
No 54
>3lx3_A 6-pyruvoyl tetrahydrobiopterin synthase; PTS, PTP synthase, PTPS, metal-binding, tetrahydrobiopterin biosynthesis, folate biosynthesis; HET: XTN; 1.55A {Plasmodium vivax} SCOP: d.96.1.2 PDB: 2a0s_A* 3m0n_A* 3lze_A*
Probab=45.50 E-value=34 Score=24.00 Aligned_cols=19 Identities=5% Similarity=0.202 Sum_probs=16.6
Q ss_pred cCCeecCHHHHHHHHHHhh
Q psy2724 73 EHGIITNWDDMEKIWHHTF 91 (174)
Q Consensus 73 ~~g~i~d~~~~~~l~~~~~ 91 (174)
+.|++.|+..++++++.+.
T Consensus 64 ~~Gmv~Df~~lk~~~~~i~ 82 (180)
T 3lx3_A 64 GDGYVIDFSILKEKVRKVC 82 (180)
T ss_dssp TTSCSSCHHHHHHHHHHHH
T ss_pred CCCeEEEHHHHHHHHHHHH
Confidence 5799999999999998765
No 55
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=44.52 E-value=18 Score=32.12 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhccccccCCCCCceEEeeCCCC-ChHHHHHHHHHhhhhcCC
Q psy2724 80 WDDMEKIWHHTFYNELRVAPEEHPILLTEAPLN-PKANREKMTQIMFETFNT 130 (174)
Q Consensus 80 ~~~~~~l~~~~~~~~L~~~~~~~~vll~e~~~~-~~~~r~~l~e~lFE~~~~ 130 (174)
.+.++.|=+|+|. .+++||+|+-..++ +.+++.+|++++-|.||-
T Consensus 389 ~~v~~~i~~~af~------~s~yPvilsle~h~~~~~qq~~~a~~~~~~~g~ 434 (885)
T 3ohm_B 389 RDVLEAIAETAFK------TSPYPVILSFENHVDSAKQQAKMAEYCRSIFGD 434 (885)
T ss_dssp HHHHHHHHHHTTS------SCCSCEEEEEEEECCCTTHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhhcc------CCCCCEEEEEecCCCCHHHHHHHHHHHHHHhhH
Confidence 4667778888883 47899999987777 688899999998777663
No 56
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=41.43 E-value=27 Score=21.73 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=23.9
Q ss_pred ecCHHHHHHHHHHhhccccccCCCCCceEEee
Q psy2724 77 ITNWDDMEKIWHHTFYNELRVAPEEHPILLTE 108 (174)
Q Consensus 77 i~d~~~~~~l~~~~~~~~L~~~~~~~~vll~e 108 (174)
.+--+.+..+|+|+-.+.| .+|.+...+.++
T Consensus 27 ~sr~evvk~lW~YIK~n~L-qdp~~k~~I~cD 57 (93)
T 1v31_A 27 ETRPRIIAAIWHYVKARKL-QNPNDPSFFNCD 57 (93)
T ss_dssp ECSHHHHHHHHHHHHHTTC-BCSSCSSEEECC
T ss_pred cCHHHHHHHHHHHHHHccC-cCcccCceeehh
Confidence 3456789999999997777 467777777775
No 57
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=41.02 E-value=25 Score=29.65 Aligned_cols=35 Identities=14% Similarity=0.267 Sum_probs=26.3
Q ss_pred hhhhHHhhhcC-----CCeEEEEecCCCceEEEeeeCCee
Q psy2724 137 IQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 137 ~~~~la~~~~g-----~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
-+|++|.+++= ..-..+||+|++.|++.-+.+|..
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~l 431 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQ 431 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSC
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcE
Confidence 56777776652 346788999999999998877754
No 58
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=40.72 E-value=26 Score=29.57 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=36.1
Q ss_pred HHHHHHHhhhhcCCC-eeeeehhhhHHhhhcC-----CCeEEEEecCCCceEEEeeeCCee
Q psy2724 117 REKMTQIMFETFNTP-AMYVAIQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 117 r~~l~e~lFE~~~~~-sv~~~~~~~la~~~~g-----~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+.+.+.+=+.++.+ .+-= -+|++|.+++= ..-..+||+|.+.|++.-+.+|..
T Consensus 370 m~NI~~cVer~~gL~veV~g-~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~l 429 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGG-AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGD 429 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEE-EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCC
T ss_pred HHHHHHHHHhccCCcceecc-ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcE
Confidence 445555555555553 1211 67777777652 356789999999999998888754
No 59
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=39.49 E-value=81 Score=23.17 Aligned_cols=49 Identities=12% Similarity=0.056 Sum_probs=35.1
Q ss_pred HHHHhhhhcCCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 120 MTQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 120 l~e~lFE~~~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
+.+.+=+.|++| +++.+++-+++++. +. +.++|.+|.+. -..-+.+|.+
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtGi-G~gii~~G~l 143 (289)
T 2aa4_A 88 LVKTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTGV-GGGVVSGCKL 143 (289)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSSE-EEEEEETTEE
T ss_pred hHHHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCccE-EEEEEECCEE
Confidence 344444567887 88899998887753 24 89999999884 4555678765
No 60
>1y13_A PTPS, 6-pyruvoyl tetrahydropterin synthase; structural genomics of pathogenic protozoa consortium, SGPP, structural genomics, PSI; HET: BIO; 2.20A {Plasmodium falciparum} SCOP: d.96.1.2
Probab=39.36 E-value=34 Score=23.90 Aligned_cols=19 Identities=5% Similarity=0.263 Sum_probs=16.7
Q ss_pred cCCeecCHHHHHHHHHHhh
Q psy2724 73 EHGIITNWDDMEKIWHHTF 91 (174)
Q Consensus 73 ~~g~i~d~~~~~~l~~~~~ 91 (174)
+.|++.|+..++++++.+.
T Consensus 65 ~~GmV~DF~~lK~~ik~i~ 83 (181)
T 1y13_A 65 DDGYVIDFSILKEKVKKVC 83 (181)
T ss_dssp TTSCSSCHHHHHHHHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHH
Confidence 6899999999999988754
No 61
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=38.18 E-value=84 Score=23.70 Aligned_cols=50 Identities=16% Similarity=0.209 Sum_probs=35.8
Q ss_pred HHHHhhhhcCCCeeeeehhhhHHhhh-------cCCCeEEEEecCCCceEEEeeeCCee
Q psy2724 120 MTQIMFETFNTPAMYVAIQAVLSLYA-------SGRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 120 l~e~lFE~~~~~sv~~~~~~~la~~~-------~g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
+.+.+-+.+++| +++.+++-+++++ .+..+.++|-+|.+. -.--|.+|.+
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~~G~l 144 (321)
T 3vgl_A 88 LKDKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTGL-GGGIIIGNKL 144 (321)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEETTEE
T ss_pred HHHHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcce-EEEEEECCEE
Confidence 334444567888 8899999888875 245789999999873 4555678765
No 62
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=37.92 E-value=24 Score=24.01 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=17.1
Q ss_pred CceEEEECCCccEEEeeeCC
Q psy2724 6 VAALVVDNGSGMCKAGFAGD 25 (174)
Q Consensus 6 ~~~vViD~Gs~~~k~G~~g~ 25 (174)
+..+-||+|+.+|.++.+..
T Consensus 3 mriLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEEECSSEEEEEEECT
T ss_pred CEEEEEEccCCEEEEEEEEC
Confidence 67899999999988887764
No 63
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=37.08 E-value=22 Score=22.14 Aligned_cols=30 Identities=20% Similarity=0.372 Sum_probs=23.0
Q ss_pred cCHHHHHHHHHHhhccccccCCCCCceEEee
Q psy2724 78 TNWDDMEKIWHHTFYNELRVAPEEHPILLTE 108 (174)
Q Consensus 78 ~d~~~~~~l~~~~~~~~L~~~~~~~~vll~e 108 (174)
+--+....+|+|+-.+.|. +|.+...+.++
T Consensus 28 sr~evvk~lW~YIK~n~Lq-dp~~k~~I~cD 57 (93)
T 1uhr_A 28 TRPVIIQALWQYIKTHKLQ-DPHEREFVLCD 57 (93)
T ss_dssp EHHHHHHHHHHHHHHTTCB-CSSCSSEECCC
T ss_pred CHHHHHHHHHHHHHhccCC-Cccccceeech
Confidence 3457899999999977774 67777777765
No 64
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=36.33 E-value=19 Score=29.54 Aligned_cols=20 Identities=15% Similarity=0.009 Sum_probs=16.4
Q ss_pred ceEEEECCCccEEEeeeCCC
Q psy2724 7 AALVVDNGSGMCKAGFAGDD 26 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~ 26 (174)
-.+.||+|+.++|++...++
T Consensus 8 ~~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEecCcceEEEEECCC
Confidence 46779999999999987643
No 65
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=34.97 E-value=26 Score=28.55 Aligned_cols=21 Identities=14% Similarity=-0.024 Sum_probs=17.3
Q ss_pred CeEEEEecCCCceEEEeeeCC
Q psy2724 149 TTGIVLDSGDGVSHTVPIYED 169 (174)
Q Consensus 149 ~tglVVDiG~~~t~v~pV~dG 169 (174)
.+.+|+|+|.++|+++=..+.
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~ 210 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTS 210 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCS
T ss_pred CceEEEEcCCCceEEEeccCC
Confidence 468999999999999866544
No 66
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=34.86 E-value=95 Score=23.32 Aligned_cols=49 Identities=10% Similarity=-0.018 Sum_probs=34.8
Q ss_pred HHHhhhhcCCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 121 TQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 121 ~e~lFE~~~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+.+-+.+++| +++.+++-+++++. +..+.++|-+|.+. -..-|.+|.+
T Consensus 113 ~~~l~~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGi-G~giv~~G~l 168 (327)
T 2ap1_A 113 RADLSARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGV-GGGLVLNGKP 168 (327)
T ss_dssp HHHHHHHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSE-EEEEEETTEE
T ss_pred HHHHHHHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCcE-EEEEEECCEE
Confidence 34444557888 88999999888752 35788999999874 3444677764
No 67
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=32.52 E-value=20 Score=29.22 Aligned_cols=18 Identities=22% Similarity=0.170 Sum_probs=14.4
Q ss_pred ceEEEECCCccEEEeeeC
Q psy2724 7 AALVVDNGSGMCKAGFAG 24 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g 24 (174)
-.+|||.||+.+|+=...
T Consensus 35 y~~vID~GSns~Rl~Vy~ 52 (456)
T 3cj1_A 35 YGIVLDAGSSHTSMFVYK 52 (456)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred EEEEEEcCCCCeEEEEEE
Confidence 356999999999995553
No 68
>1b66_A 6-pyruvoyl tetrahydropterin synthase; tetrahydrobiopterin biosynthesis, phosphate elimination, PTE synthesis; HET: BIO; 1.90A {Rattus rattus} SCOP: d.96.1.2 PDB: 1b6z_A 1gtq_A 3i2b_A
Probab=30.69 E-value=15 Score=24.76 Aligned_cols=50 Identities=16% Similarity=0.309 Sum_probs=29.7
Q ss_pred cCCeecCHHHHHHHHHH-hhccccccCCCCCceEE-eeCCC-CChHHHHHHHHHhhhhc
Q psy2724 73 EHGIITNWDDMEKIWHH-TFYNELRVAPEEHPILL-TEAPL-NPKANREKMTQIMFETF 128 (174)
Q Consensus 73 ~~g~i~d~~~~~~l~~~-~~~~~L~~~~~~~~vll-~e~~~-~~~~~r~~l~e~lFE~~ 128 (174)
+.|++.|+..++++++. +. +.| +|..|- -.|.+ .....-|.++.++++.+
T Consensus 61 ~~GmV~Df~~lK~~i~~~i~-~~l-----DH~~Ln~dvp~f~~~~pTaEnlA~~i~~~l 113 (140)
T 1b66_A 61 VTGMVMNLTDLKEYMEEAIM-KPL-----DHKNLDLDVPYFADVVSTTENVAVYIWENL 113 (140)
T ss_dssp TTCCSSCHHHHHHHHHHHTH-HHH-----TTEEHHHHCGGGTSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHHh-hcC-----CCCcccccCcccCCCCCCHHHHHHHHHHHH
Confidence 47999999999999886 54 332 222221 11211 12234477888887765
No 69
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=28.47 E-value=1.5e+02 Score=22.30 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=35.3
Q ss_pred HHHhhhhc-CCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 121 TQIMFETF-NTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 121 ~e~lFE~~-~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+.+-+.+ ++| +++.+++-+++++. +..+.++|-+|.+. -..-|.+|.+
T Consensus 110 ~~~l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi-G~gii~~G~l 166 (321)
T 3r8e_A 110 VEILRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTGV-GSGVMMNGKL 166 (321)
T ss_dssp HHHHHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEETTEE
T ss_pred HHHHHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCce-EEEEEECCEE
Confidence 34444667 887 88999988887652 46789999999874 4455678775
No 70
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=27.69 E-value=44 Score=25.55 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=19.5
Q ss_pred CCceEEEECCCccEEEeeeCCCCC
Q psy2724 5 DVAALVVDNGSGMCKAGFAGDDAP 28 (174)
Q Consensus 5 ~~~~vViD~Gs~~~k~G~~g~~~P 28 (174)
+.+.+|+|+|+.++.+-+..+..|
T Consensus 130 ~~~~lviDIGGGStEl~~~~~~~~ 153 (315)
T 3mdq_A 130 DHISLAMDIGGGSVEFIIGNKNEI 153 (315)
T ss_dssp TCCEEEEEECSSCEEEEEECSSCE
T ss_pred CCCEEEEEeCCCceEEEEEECCeE
Confidence 457899999999999988765544
No 71
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=27.59 E-value=1.4e+02 Score=23.62 Aligned_cols=50 Identities=10% Similarity=0.199 Sum_probs=35.6
Q ss_pred HHHHhhhhcCCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 120 MTQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 120 l~e~lFE~~~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
+.+.+-+.+++| +++.+++-+++++. +..+.++|-+|.+. -..-|.+|.+
T Consensus 200 l~~~L~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi-G~giv~~G~l 256 (429)
T 1z05_A 200 LGPEIYKATGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGL-GAGIVLDGRV 256 (429)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEETTEE
T ss_pred HHHHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcE-EEEEEECCEE
Confidence 334444567888 88999998887753 45789999999874 4555677764
No 72
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=27.41 E-value=54 Score=25.44 Aligned_cols=59 Identities=7% Similarity=0.045 Sum_probs=36.6
Q ss_pred CCeecCHHHHHHHHHHhhcc-------ccccCCCCCceEEeeCCCCChHHHHHHHHHhhhhc----------CCCeeeee
Q psy2724 74 HGIITNWDDMEKIWHHTFYN-------ELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF----------NTPAMYVA 136 (174)
Q Consensus 74 ~g~i~d~~~~~~l~~~~~~~-------~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lFE~~----------~~~sv~~~ 136 (174)
+|.....+.++++.+.+... ..++++....+++. =-.+.+-+|+.+ +++.+.+.
T Consensus 254 hg~~l~~~~l~~~~~~l~~~~~~er~~~~gl~~~Radvi~~---------g~~Il~~i~~~~~~~~~~~~~~~~~~i~vs 324 (343)
T 3cer_A 254 DGHRLSFEDAYAVDDKFLRMTRAERREYKTIHPGRIDVVGG---------GAVVWSRVLARVSEAAKADHGEAIDSFVAS 324 (343)
T ss_dssp TTCEEEHHHHHHHHHHHHSSCHHHHHTCTTSCTTTTTTHHH---------HHHHHHHHHHHHHHHHHHHHSCCCCEEEEE
T ss_pred CCeEEcHHHHHHHHHHHHcCCHHHHHhcCCCChhHHHHHHH---------HHHHHHHHHHHHHhhccccccCCCCEEEEC
Confidence 44545567777777766531 22445555555533 234677778888 89988887
Q ss_pred hhhhH
Q psy2724 137 IQAVL 141 (174)
Q Consensus 137 ~~~~l 141 (174)
...+.
T Consensus 325 ~~glr 329 (343)
T 3cer_A 325 EHGLL 329 (343)
T ss_dssp SCSHH
T ss_pred CCcHH
Confidence 76554
No 73
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=27.27 E-value=1.4e+02 Score=23.29 Aligned_cols=49 Identities=16% Similarity=0.140 Sum_probs=35.1
Q ss_pred HHHhhhhcCCCeeeeehhhhHHhhhc-------CCCeEEEEecCCCceEEEeeeCCee
Q psy2724 121 TQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 121 ~e~lFE~~~~~sv~~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~ 171 (174)
.+.+-+.|++| +++.+++-+++++. +..+.++|-+|.+. -..-|.+|.+
T Consensus 179 ~~~l~~~~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi-G~giv~~G~l 234 (406)
T 1z6r_A 179 GEALEQHTGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNV-GAGVITDGHL 234 (406)
T ss_dssp HHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEETTEE
T ss_pred HHHHHHHHCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcE-EEEEEECCEE
Confidence 34444557888 78889988887752 45789999999874 4555678865
No 74
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=26.91 E-value=37 Score=20.11 Aligned_cols=25 Identities=20% Similarity=0.458 Sum_probs=20.7
Q ss_pred CCCCceEEEECCCccEEEeeeCCCCCCC
Q psy2724 3 DDDVAALVVDNGSGMCKAGFAGDDAPRA 30 (174)
Q Consensus 3 ~~~~~~vViD~Gs~~~k~G~~g~~~P~~ 30 (174)
+|+....|+++....+|.|+. .|+-
T Consensus 15 Gd~I~ItVl~v~g~~VrLGI~---APk~ 39 (70)
T 2jpp_A 15 GDDITITILGVSGQQVRIGIN---APKD 39 (70)
T ss_dssp TTTEEEEEEEEETTEEEEEEE---CCTT
T ss_pred CCCEEEEEEEEeCCEEEEEEE---CCCC
Confidence 578889999999999999995 4653
No 75
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=26.00 E-value=61 Score=20.53 Aligned_cols=29 Identities=14% Similarity=0.219 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHhhccccccCCCCCceEEee
Q psy2724 79 NWDDMEKIWHHTFYNELRVAPEEHPILLTE 108 (174)
Q Consensus 79 d~~~~~~l~~~~~~~~L~~~~~~~~vll~e 108 (174)
--+..+.+|+|+-.+.| .+|.+...++++
T Consensus 37 R~eVvk~lW~YIK~nnL-Qdp~~Kr~I~cD 65 (101)
T 1v32_A 37 RYDVSDTIAKYISKEGL-LDPSNKKKVVCD 65 (101)
T ss_dssp HHHHHHHHHHHHHHHTC-BCSSCTTEEECC
T ss_pred HHHHHHHHHHHHHhhcC-cCcccCCeeecc
Confidence 35788999999987777 477888888875
No 76
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=25.60 E-value=40 Score=20.12 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=19.0
Q ss_pred CCCCceEEEECCCccEEEeeeC
Q psy2724 3 DDDVAALVVDNGSGMCKAGFAG 24 (174)
Q Consensus 3 ~~~~~~vViD~Gs~~~k~G~~g 24 (174)
+|+....|+++....+|+|+..
T Consensus 27 GddI~ItVl~i~g~qVrLGI~A 48 (73)
T 1vpz_A 27 GDDVTVTVLGVKGNQVRIGVNA 48 (73)
T ss_dssp TTTEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEEEeCCEEEEEEEC
Confidence 5788899999999999999843
No 77
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=24.69 E-value=43 Score=19.34 Aligned_cols=22 Identities=18% Similarity=0.318 Sum_probs=18.8
Q ss_pred CCCCceEEEECCCccEEEeeeC
Q psy2724 3 DDDVAALVVDNGSGMCKAGFAG 24 (174)
Q Consensus 3 ~~~~~~vViD~Gs~~~k~G~~g 24 (174)
+|+....|+++....+|.|+..
T Consensus 17 gd~I~I~Vl~i~g~~VrlGI~A 38 (63)
T 2bti_A 17 GDEVTVTVLGVKGNQVRIGVNA 38 (63)
T ss_dssp TTTEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEEEeCCEEEEEEEC
Confidence 5788889999999999999843
No 78
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=24.44 E-value=82 Score=23.82 Aligned_cols=54 Identities=15% Similarity=0.240 Sum_probs=34.3
Q ss_pred eeccccCCeecCHHHHHHHHHHhhccccccCCCCCceEEe----eCCCCChHHHHHHHHHhhhhc
Q psy2724 68 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLT----EAPLNPKANREKMTQIMFETF 128 (174)
Q Consensus 68 ~~~p~~~g~i~d~~~~~~l~~~~~~~~L~~~~~~~~vll~----e~~~~~~~~r~~l~e~lFE~~ 128 (174)
+.-|+++|. .|++.++++.++.... +++ .+++. |.+..+.++|+++.+..-|..
T Consensus 16 ~vTPf~dg~-iD~~~l~~lv~~li~~--Gv~----gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~ 73 (301)
T 3m5v_A 16 LITPFKNGK-VDEQSYARLIKRQIEN--GID----AVVPVGTTGESATLTHEEHRTCIEIAVETC 73 (301)
T ss_dssp CCCCEETTE-ECHHHHHHHHHHHHHT--TCC----EEECSSTTTTGGGSCHHHHHHHHHHHHHHH
T ss_pred eecCcCCCC-CCHHHHHHHHHHHHHc--CCC----EEEECccccChhhCCHHHHHHHHHHHHHHh
Confidence 456786665 5999999999998843 221 22321 334456677777777776653
No 79
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=23.38 E-value=1.5e+02 Score=22.23 Aligned_cols=53 Identities=11% Similarity=0.305 Sum_probs=33.1
Q ss_pred eeccccCCeecCHHHHHHHHHHhhccccccCCCCCceEEe----eCCCCChHHHHHHHHHhhhh
Q psy2724 68 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLT----EAPLNPKANREKMTQIMFET 127 (174)
Q Consensus 68 ~~~p~~~g~i~d~~~~~~l~~~~~~~~L~~~~~~~~vll~----e~~~~~~~~r~~l~e~lFE~ 127 (174)
+.-|++..- .|++.++++.++.... +++ .+++. |.+..+.++|+++.+..-|.
T Consensus 10 ~vTPf~~dg-iD~~~l~~lv~~li~~--Gv~----gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 66 (291)
T 3a5f_A 10 IITPFTNTG-VDFDKLSELIEWHIKS--KTD----AIIVCGTTGEATTMTETERKETIKFVIDK 66 (291)
T ss_dssp CCCCBCSSS-BCHHHHHHHHHHHHHT--TCC----EEEESSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred eEcCcCCCC-cCHHHHHHHHHHHHHc--CCC----EEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 456886433 8999999999998843 221 23332 34455666666666666654
No 80
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=23.23 E-value=57 Score=26.65 Aligned_cols=20 Identities=20% Similarity=0.305 Sum_probs=16.8
Q ss_pred ceEEEECCCccEEEeeeCCC
Q psy2724 7 AALVVDNGSGMCKAGFAGDD 26 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~ 26 (174)
-.+.||+|+.++|++...++
T Consensus 4 ~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEcCCcceEEEEECCC
Confidence 46789999999999988654
No 81
>2joi_A Hypothetical protein TA0095; structural genomics, COG4004 orthologous group, structural genomics consortium, SGC, unknown function; NMR {Thermoplasma acidophilum}
Probab=21.98 E-value=56 Score=21.33 Aligned_cols=24 Identities=21% Similarity=0.581 Sum_probs=21.6
Q ss_pred eccccCCeecCHHHHHHHHHHhhc
Q psy2724 69 KYPIEHGIITNWDDMEKIWHHTFY 92 (174)
Q Consensus 69 ~~p~~~g~i~d~~~~~~l~~~~~~ 92 (174)
.||+.+|.-.+.|.+.+.++.+|.
T Consensus 25 eY~~KRG~k~~lerI~~~l~e~Fg 48 (118)
T 2joi_A 25 EYPVKKGFPTDYDSIKRKISELGF 48 (118)
T ss_dssp EECCCSSSCCSHHHHHHHHHHHTC
T ss_pred ccccccCCCCcHHHHHHHHHHHcC
Confidence 489999999999999999999985
No 82
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=21.45 E-value=59 Score=26.39 Aligned_cols=20 Identities=20% Similarity=0.192 Sum_probs=17.0
Q ss_pred ceEEEECCCccEEEeeeCCC
Q psy2724 7 AALVVDNGSGMCKAGFAGDD 26 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~ 26 (174)
-.+.||+|+.++|++...++
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp CEEEEEECSSEEEEEEECTT
T ss_pred EEEEEeeCCcceEEEEECCC
Confidence 36899999999999988654
No 83
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=20.97 E-value=61 Score=26.59 Aligned_cols=20 Identities=20% Similarity=0.260 Sum_probs=16.8
Q ss_pred ceEEEECCCccEEEeeeCCC
Q psy2724 7 AALVVDNGSGMCKAGFAGDD 26 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~ 26 (174)
-.+.||+|+.++|++....+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred eEEEEEeCCcceEEEEECCC
Confidence 46889999999999987643
No 84
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=20.88 E-value=61 Score=26.48 Aligned_cols=20 Identities=30% Similarity=0.298 Sum_probs=17.0
Q ss_pred ceEEEECCCccEEEeeeCCC
Q psy2724 7 AALVVDNGSGMCKAGFAGDD 26 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~ 26 (174)
-.+.||+|+.++|++....+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEECCC
Confidence 57889999999999987654
No 85
>2nrh_A Transcriptional activator, putative, BAF family; structural genomics, unknown function, putative transcription activator, PSI-2; 2.30A {Campylobacter jejuni} SCOP: c.55.1.13 c.55.1.13
Probab=20.69 E-value=34 Score=24.88 Aligned_cols=15 Identities=33% Similarity=0.450 Sum_probs=12.2
Q ss_pred CceEEEECCCccEEE
Q psy2724 6 VAALVVDNGSGMCKA 20 (174)
Q Consensus 6 ~~~vViD~Gs~~~k~ 20 (174)
.+.+|+|.||.++==
T Consensus 85 ~~~iVVD~GTA~T~D 99 (219)
T 2nrh_A 85 EDGVVVDAGSAITID 99 (219)
T ss_dssp SSSEEEEESSEEEEE
T ss_pred CCeEEEEcCCcEEEE
Confidence 478999999998743
No 86
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=20.54 E-value=59 Score=26.47 Aligned_cols=20 Identities=30% Similarity=0.424 Sum_probs=16.4
Q ss_pred ceEEEECCCccEEEeeeCCC
Q psy2724 7 AALVVDNGSGMCKAGFAGDD 26 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~ 26 (174)
-.+.||+|+.++|++...++
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 46889999999999987643
No 87
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=20.34 E-value=55 Score=27.06 Aligned_cols=21 Identities=29% Similarity=0.322 Sum_probs=17.3
Q ss_pred CceEEEECCCccEEEeeeCCC
Q psy2724 6 VAALVVDNGSGMCKAGFAGDD 26 (174)
Q Consensus 6 ~~~vViD~Gs~~~k~G~~g~~ 26 (174)
.-.+.||+||.++|+....++
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEECcccEEEEEECCC
Confidence 457889999999999887643
No 88
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=20.27 E-value=2.5e+02 Score=20.26 Aligned_cols=50 Identities=20% Similarity=0.274 Sum_probs=34.8
Q ss_pred HHHHhhhhcCCCeeeeehhhhHHhhhc-----C--CC-eEEEEecCCCceEEEeeeCCee
Q psy2724 120 MTQIMFETFNTPAMYVAIQAVLSLYAS-----G--RT-TGIVLDSGDGVSHTVPIYEDHE 171 (174)
Q Consensus 120 l~e~lFE~~~~~sv~~~~~~~la~~~~-----g--~~-tglVVDiG~~~t~v~pV~dG~~ 171 (174)
+.+.+=+.|++| +++.+++-+++++. + .. +.+.|-+|.+ .-.--|.||.+
T Consensus 106 l~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv~~G~l 163 (267)
T 1woq_A 106 IDALLTARLGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFIFDGKL 163 (267)
T ss_dssp HHHHHHHHHTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEEETTEE
T ss_pred HHHHHHHHHCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEEECCEE
Confidence 445555667888 88999999888762 2 23 5678888886 44555778865
No 89
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=20.20 E-value=53 Score=26.53 Aligned_cols=18 Identities=22% Similarity=0.272 Sum_probs=15.7
Q ss_pred ceEEEECCCccEEEeeeC
Q psy2724 7 AALVVDNGSGMCKAGFAG 24 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g 24 (174)
..+.||+|+.++|++...
T Consensus 5 ~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEE
Confidence 468999999999998874
No 90
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=20.13 E-value=54 Score=26.78 Aligned_cols=20 Identities=15% Similarity=0.087 Sum_probs=16.7
Q ss_pred ceEEEECCCccEEEeeeCCC
Q psy2724 7 AALVVDNGSGMCKAGFAGDD 26 (174)
Q Consensus 7 ~~vViD~Gs~~~k~G~~g~~ 26 (174)
-.+.||+|+.++|++.-.++
T Consensus 5 ~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEecCCceEEEEEcCC
Confidence 46789999999999987643
No 91
>1d8w_A L-rhamnose isomerase; beta-alpha-8-barrels, aldose-ketose isomerization, hydride shift; 1.60A {Escherichia coli} SCOP: c.1.15.2 PDB: 1de5_A* 1de6_A*
Probab=20.10 E-value=34 Score=27.45 Aligned_cols=28 Identities=29% Similarity=0.325 Sum_probs=20.8
Q ss_pred eeeehhhhHHhhhcCCCeEEEEecCCCc
Q psy2724 133 MYVAIQAVLSLYASGRTTGIVLDSGDGV 160 (174)
Q Consensus 133 v~~~~~~~la~~~~g~~tglVVDiG~~~ 160 (174)
......-....|+.|+...+.||.||-.
T Consensus 244 Ytvgs~df~~~Ya~~~~a~~llD~GH~h 271 (426)
T 1d8w_A 244 YTVGSNEFYMGYATSRQTALCLDAGHFH 271 (426)
T ss_dssp EESSCHHHHHHHHHHHTCEEEEETTSSC
T ss_pred eeccchHHHHHhhcCCCcEEEEeCCCCC
Confidence 3344444556788899999999999964
Done!