RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2726
(543 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 210 bits (538), Expect = 8e-66
Identities = 79/198 (39%), Positives = 109/198 (55%), Gaps = 39/198 (19%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
+ C C K+F++S +L H+R
Sbjct: 22 YACPECGKSFSRSD---------------------------------------HLAEHQR 42
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTG 402
HTGE+P++C C K+F+ + +L +H +THTGEKPY C C K+F+QRANL H R HTG
Sbjct: 43 THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG 102
Query: 403 ERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPY 462
E+PY+C CGK F+Q A+L H R H+GE+PY C C K+F ++ NL H+R HTG KPY
Sbjct: 103 EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY 162
Query: 463 SCKICWKAFAQTGNLTKH 480
C C K+F++ L H
Sbjct: 163 KCPECGKSFSRRDALNVH 180
Score = 210 bits (537), Expect = 1e-65
Identities = 67/145 (46%), Positives = 94/145 (64%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 395
+ + GE+P+ C C K+F++ +L +H +THTGEKPY C C K+F+ + +L +
Sbjct: 8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTR 67
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERV 455
H R HTGE+PY C CGK F+Q+ANL H R H+GE+PY C C K+F Q ++L H+R
Sbjct: 68 HQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT 127
Query: 456 HTGVKPYSCKICWKAFAQTGNLTKH 480
HTG KPY C C K+F++ NL H
Sbjct: 128 HTGEKPYKCPECGKSFSREDNLHTH 152
Score = 183 bits (466), Expect = 4e-55
Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 39/179 (21%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
+ C C K+F+ +L H+R
Sbjct: 50 YKCPECGKSFSDKK---------------------------------------DLTRHQR 70
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTG 402
HTGE+P++C C K+F+Q+ NL H +THTGEKPY C C K+F+Q A+L H R HTG
Sbjct: 71 THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG 130
Query: 403 ERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKP 461
E+PY C CGK F+++ NL H R H+GE+PY C C K+F ++ L+ H+R HTG K
Sbjct: 131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 178 bits (455), Expect = 2e-53
Identities = 53/123 (43%), Positives = 75/123 (60%)
Query: 358 TFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQ 417
+ + GEKPY C C K+F++ +L +H R HTGE+PY C CGK F+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 418 QANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNL 477
+ +L +H R H+GE+PY C C K+F Q++NL H+R HTG KPY+C C K+F+Q +L
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 478 TKH 480
H
Sbjct: 122 RAH 124
Score = 166 bits (424), Expect = 5e-49
Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 22/145 (15%)
Query: 83 SRRS---THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRA 139
SR H+R HTGE+P++C C K+F+ + +L +H +THTGEKPY C C K+F+QRA
Sbjct: 32 SRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRA 91
Query: 140 NLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 199
NL H+R HTGE+P+ C C K+F+Q +L H +THTGEK
Sbjct: 92 -------------------NLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK 132
Query: 200 PYNCGMCDKAFTQRANLLKHIRVHT 224
PY C C K+F++ NL H R HT
Sbjct: 133 PYKCPECGKSFSREDNLHTHQRTHT 157
Score = 166 bits (422), Expect = 9e-49
Identities = 62/144 (43%), Positives = 88/144 (61%), Gaps = 19/144 (13%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRAN 140
++ + H+R HTGE+P++C C K+F+Q+ NL H +THTGEKPY C C K+F+Q A+
Sbjct: 61 DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAH 120
Query: 141 LWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKP 200
L H+R HTGE+P++C C K+F+++ NL H +THTGEKP
Sbjct: 121 LR-------------------AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP 161
Query: 201 YNCGMCDKAFTQRANLLKHIRVHT 224
Y C C K+F++R L H R HT
Sbjct: 162 YKCPECGKSFSRRDALNVHQRTHT 185
Score = 165 bits (420), Expect = 2e-48
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 19/138 (13%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWV 146
+ GE+P+ C C K+F++ +L +H +THTGEKPY C C K+F+ +
Sbjct: 11 AQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK------- 63
Query: 147 CHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMC 206
+L H+R HTGE+P++C C K+F+Q+ NL H +THTGEKPY C C
Sbjct: 64 ------------DLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPEC 111
Query: 207 DKAFTQRANLLKHIRVHT 224
K+F+Q A+L H R HT
Sbjct: 112 GKSFSQLAHLRAHQRTHT 129
Score = 136 bits (344), Expect = 1e-37
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 19/119 (15%)
Query: 106 TFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHER 165
+ + GEKPY C C K+F++ +L H+R
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHL-------------------AEHQR 42
Query: 166 IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
HTGE+P++C C K+F+ + +L +H +THTGEKPY C C K+F+QRANL H R HT
Sbjct: 43 THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHT 101
Score = 134 bits (340), Expect = 6e-37
Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 19/120 (15%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRAN 140
+R+ H+R HTGE+P+ C C K+F+Q +L H +THTGEKPY C C K+F++ N
Sbjct: 89 QRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDN 148
Query: 141 LWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKP 200
L TH+R HTGE+P++C C K+F+++ L H +THTG+K
Sbjct: 149 LH-------------------THQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 94.8 bits (237), Expect = 8e-23
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 64/148 (43%)
Query: 25 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSR 84
+ C C K+F+Q + +L
Sbjct: 106 YACPECGKSFSQLA-------------HLR------------------------------ 122
Query: 85 RSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGS 144
H+R HTGE+P++C C K+F+++ NL H +THTGEKPY C C K+F++R L
Sbjct: 123 --AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALN-- 178
Query: 145 WVCHPTAVRDLFLVNLGTHERIHTGERP 172
H+R HTG++
Sbjct: 179 -----------------VHQRTHTGKKT 189
Score = 59.0 bits (144), Expect = 2e-10
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 442 TFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
+ S+ + G KPY+C C K+F+++ +L +H+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQ 41
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 183 bits (467), Expect = 3e-55
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 340 HERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDKAFTQRANLLK 395
+ + + + C C + + L H+ HTGEKP+ C C+K FT +L +
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 396 HIRVHTGERPYSCK--LCGKRFTQQANLVKHNRLHSGER--PYHCRY--CTKTFIQQSNL 449
H HTGE+ ++C C RFT +AN+ KH + Y C + C K F + + L
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 450 DRHERVHTGVKPYSCK--ICWKAFAQTGNLTKHE 481
H+ HT PY C C K F+ L +HE
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE 156
Score = 177 bits (451), Expect = 5e-53
Identities = 57/160 (35%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 336 NLGTHERIHTGERPFRCE--VCMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDKAFTQRA 391
L H HTGE+PF C+ C K FT +L +H THTGEK + C CD FT +A
Sbjct: 29 KLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA 88
Query: 392 NLLKHIRVHTGER--PYSCKL--CGKRFTQQANLVKHNRLHSGERPYHC--RYCTKTFIQ 445
N+ KH + Y C CGK F + L H H+ + PY C C K F
Sbjct: 89 NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSL 148
Query: 446 QSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKHELSAH 485
S L RHE+VH G C KH H
Sbjct: 149 PSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 148 bits (376), Expect = 4e-42
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 367 KHMKTHTGEKPYNCGM--CDKAFTQRANLLKHIRVHTGERPYSCK--LCGKRFTQQANLV 422
K Y C C A+ + L H+ HTGE+P+ CK C K FT +L
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 423 KHNRLHSGERPYHC--RYCTKTFIQQSNLDRHERVHTGVK--PYSCKI--CWKAFAQTGN 476
+H+ H+GE+ + C C F ++N+ +H +K Y C C KAF +
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 477 LTKHE 481
L H+
Sbjct: 122 LKVHQ 126
Score = 147 bits (374), Expect = 7e-42
Identities = 40/147 (27%), Positives = 55/147 (37%), Gaps = 29/147 (19%)
Query: 88 HERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDKAFTQRANLWG 143
+ + + + C C + + L H+ HTGEKP+ C C+K FT
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLH---- 58
Query: 144 SWVCHPTAVRDLFLVNLGTHERIHTGERPFRCE--VCMKTFTQQPNLWKHMKTHTGEK-- 199
+L H HTGE+ F C+ C FT + N+ KH K
Sbjct: 59 ---------------HLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKIC 103
Query: 200 PYNCGM--CDKAFTQRANLLKHIRVHT 224
Y C C KAF + L H HT
Sbjct: 104 VYVCHFENCGKAFKKHNQLKVHQFSHT 130
Score = 147 bits (373), Expect = 1e-41
Identities = 47/148 (31%), Positives = 63/148 (42%), Gaps = 29/148 (19%)
Query: 87 THERIHTGERPFRCE--VCMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDKAFTQRANLW 142
H HTGE+PF C+ C K FT +L +H THTGEK + C CD FT +AN+
Sbjct: 32 AHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMK 91
Query: 143 GSWVCHPTAVRDLFLVNLGTHERIHTGER--PFRCEV--CMKTFTQQPNLWKHMKTHTGE 198
H + + C C K F + L H +HT +
Sbjct: 92 -------------------KHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132
Query: 199 KPYNC--GMCDKAFTQRANLLKHIRVHT 224
PY C CDK F+ + L +H +VH
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHA 160
Score = 135 bits (343), Expect = 2e-37
Identities = 40/153 (26%), Positives = 53/153 (34%), Gaps = 28/153 (18%)
Query: 82 RSRRSTHERIHTGERPFRCE--VCMKTFTQQPNLWKHMKTHTGEK--PYNCGM--CDKAF 135
+ H HTGE+ F C+ C FT + N+ KH K Y C C KAF
Sbjct: 57 LHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAF 116
Query: 136 TQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMK 193
+ L H+ HT + P+ C E C K F+ L +H K
Sbjct: 117 KKHNQLK-------------------VHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK 157
Query: 194 THTGEKPYNCGMCDKAFTQRANLLKHI-RVHTE 225
H G C LKH+ H +
Sbjct: 158 VHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190
Score = 118 bits (299), Expect = 2e-31
Identities = 35/116 (30%), Positives = 44/116 (37%), Gaps = 25/116 (21%)
Query: 115 KHMKTHTGEKPYNCGM--CDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERP 172
K Y C C A+ + L H HTGE+P
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNW-------------------KLQAHLCKHTGEKP 42
Query: 173 FRCE--VCMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDKAFTQRANLLKHIRVHT 224
F C+ C K FT +L +H THTGEK + C CD FT +AN+ KH
Sbjct: 43 FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH 98
Score = 116 bits (292), Expect = 2e-30
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 394 LKHIRVHTGERPYSCKL--CGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTFIQQSNL 449
+ + + Y C CG + + L H H+GE+P+ C+ C K F +L
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60
Query: 450 DRHERVHTGVKPYSCK--ICWKAFAQTGNLTKHE 481
RH HTG K ++C C F N+ KH
Sbjct: 61 TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF 94
Score = 70.3 bits (173), Expect = 3e-14
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 81 ERSRRSTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTG---EKPYNCGMCDKAF 135
+ ++ H+ HT + P+ C E C K F+ L +H K H G +K +C K +
Sbjct: 118 KHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW 177
Query: 136 TQ 137
T
Sbjct: 178 TL 179
Score = 39.9 bits (94), Expect = 8e-04
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK-THT 121
SR HE++H G + + C KH+ H
Sbjct: 148 LPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 167 bits (426), Expect = 8e-50
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 339 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY---------NCGMCDKAFTQ 389
+ + I + + C +TF+ L H+ P C K+F
Sbjct: 15 SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74
Query: 390 RANLLKHIRVHTGERPYSCKL--CGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTFIQ 445
+ L+ HIRVHTGE+P+ C CGK F + NL H R H+GE+P+ C + C + F
Sbjct: 75 KYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFAN 134
Query: 446 QSNLDRHERVHTGVKPYSC 464
S+ +H VHT K
Sbjct: 135 SSDRKKHMHVHTSDKSGPS 153
Score = 144 bits (366), Expect = 3e-41
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 32/151 (21%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY---------NCGMCDKAFTQ 137
+ + I + + C +TF+ L H+ P C K+F
Sbjct: 15 SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74
Query: 138 RANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTH 195
+ L H R+HTGE+PF C C K F + NL H +TH
Sbjct: 75 KY-------------------KLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115
Query: 196 TGEKPYNCGM--CDKAFTQRANLLKHIRVHT 224
TGEKP+ C CD+ F ++ KH+ VHT
Sbjct: 116 TGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146
Score = 142 bits (360), Expect = 3e-40
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 13/139 (9%)
Query: 355 CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYS------- 407
+ + CD+ F+ L+ H+ + P
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 408 --CKLCGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTFIQQSNLDRHERVHTGVKPYS 463
C GK F + LV H R+H+GE+P+ C + C K F + NL H+R HTG KP+
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 464 CKI--CWKAFAQTGNLTKH 480
C+ C + FA + + KH
Sbjct: 123 CEFEGCDRRFANSSDRKKH 141
Score = 132 bits (334), Expect = 1e-36
Identities = 39/167 (23%), Positives = 60/167 (35%), Gaps = 52/167 (31%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
K C++TF+ L TH
Sbjct: 26 RPKKSCDRTFSTMH---------------------------------------ELVTHVT 46
Query: 343 IHTGERPFR---------CEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRA 391
+ P + C K+F + L H++ HTGEKP+ C C K F +
Sbjct: 47 MEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSE 106
Query: 392 NLLKHIRVHTGERPYSCKL--CGKRFTQQANLVKHNRLHSGERPYHC 436
NL H R HTGE+P+ C+ C +RF ++ KH +H+ ++
Sbjct: 107 NLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 130 bits (330), Expect = 4e-36
Identities = 40/235 (17%), Positives = 62/235 (26%), Gaps = 88/235 (37%)
Query: 178 CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTENLKLYTRRKEEV 237
+ + CD+ F+ L+ H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH------------- 49
Query: 238 EVEVDVCAGIYPLHQEGGVGLMGLPSHCCPGPIRKRKKKPRRDGTFVCKVCNKTFTQSSW 297
+ ++ C K+F
Sbjct: 50 --------------------------------VGGPEQNNHVCYWEECPREGKSFKAKY- 76
Query: 298 GHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIHTGERPFRCEV--C 355
L H R+HTGE+PF C C
Sbjct: 77 --------------------------------------KLVNHIRVHTGEKPFPCPFPGC 98
Query: 356 MKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRANLLKHIRVHTGERPYSC 408
K F + NL H +THTGEKP+ C CD+ F ++ KH+ VHT ++
Sbjct: 99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 123 bits (310), Expect = 3e-33
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 32/130 (24%)
Query: 87 THERIHTGERPFR---------CEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAF 135
TH + P + C K+F + L H++ HTGEKP+ C C K F
Sbjct: 43 THVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF 102
Query: 136 TQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMK 193
+ NL H+R HTGE+PF+CE C + F + KHM
Sbjct: 103 ARSENL-------------------KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 143
Query: 194 THTGEKPYNC 203
HT +K
Sbjct: 144 VHTSDKSGPS 153
Score = 111 bits (280), Expect = 5e-29
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 11/111 (9%)
Query: 381 GMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYH----- 435
G + L + + K C + F+ LV H + P
Sbjct: 1 GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 436 ----CRYCTKTFIQQSNLDRHERVHTGVKPYSCKI--CWKAFAQTGNLTKH 480
C K+F + L H RVHTG KP+ C C K FA++ NL H
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH 111
Score = 106 bits (266), Expect = 4e-27
Identities = 28/133 (21%), Positives = 40/133 (30%), Gaps = 30/133 (22%)
Query: 103 CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGT 162
+ + CD+ F+ L T
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMH-------------------ELVT 43
Query: 163 HERIHTGERPFR---------CEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFT 211
H + P + C K+F + L H++ HTGEKP+ C C K F
Sbjct: 44 HVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA 103
Query: 212 QRANLLKHIRVHT 224
+ NL H R HT
Sbjct: 104 RSENLKIHKRTHT 116
Score = 68.9 bits (169), Expect = 4e-14
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 83 SRRS---THERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNC 128
+R H+R HTGE+PF+CE C + F + KHM HT +K
Sbjct: 103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 48.1 bits (115), Expect = 6e-07
Identities = 17/96 (17%), Positives = 24/96 (25%), Gaps = 12/96 (12%)
Query: 439 CTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKHELSAHGIGKPGVNKGTNT 498
+ + + K C + F+ L H H G N
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 499 HNCEEKCSIPVLLCSKTGKILKKLPMKYHH--HSGE 532
C K+ K KL H H+GE
Sbjct: 63 EECPR--------EGKSFKAKYKL--VNHIRVHTGE 88
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 165 bits (419), Expect = 9e-49
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 347 ERPFRCEVCMKTFTQQPNLWKHMKT---HTGEKPYNCGMCD-----KAFTQRANLLKHIR 398
E R + C + F Q L H+ + H K + C + F + L+ H+R
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 399 VHTGERPYSCKL--CGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTFIQQSNLDRH-E 453
HTGE+P+ C C K +++ NL H R H+GE+PY C + C+K F S+ +H
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 454 RVHTGVKPYSCKI--CWKAFAQTGNLTKH 480
R H+ KPY CK+ C K + +L KH
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149
Score = 154 bits (391), Expect = 1e-44
Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 336 NLGTH---ERIHTGERPFRCEVC-----MKTFTQQPNLWKHMKTHTGEKPYNCGM--CDK 385
L H E IH + F C ++ F Q L HM+ HTGEKP+ C C K
Sbjct: 18 QLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRK 77
Query: 386 AFTQRANLLKHIRVHTGERPYSCK--LCGKRFTQQANLVKH-NRLHSGERPYHCRY--CT 440
++++ NL H+R HTGE+PY C+ C K F+ ++ KH NR HS E+PY C+ CT
Sbjct: 78 SYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCT 137
Query: 441 KTFIQQSNLDRHERVHTG 458
K + S+L +H + G
Sbjct: 138 KRYTDPSSLRKHVKTVHG 155
Score = 146 bits (371), Expect = 7e-42
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 87 THERIHTGERPFRCEVC-----MKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRA 139
E IH + F C ++ F Q L HM+ HTGEKP+ C C K++++
Sbjct: 24 NSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR-- 81
Query: 140 NLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCE--VCMKTFTQQPNLWKHMK-THT 196
L NL TH R HTGE+P+ CE C K F+ + KH TH+
Sbjct: 82 -----------------LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124
Query: 197 GEKPYNCGM--CDKAFTQRANLLKHIRVHT 224
EKPY C + C K +T ++L KH++
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 129 bits (327), Expect = 1e-35
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 375 EKPYNCGMCDKAFTQRANLLKHI---RVHTGERPYSCKLCG-----KRFTQQANLVKHNR 426
E C + F + L+ HI +H + + C G + F Q LV H R
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 427 LHSGERPYHCRY--CTKTFIQQSNLDRHERVHTGVKPYSCK--ICWKAFAQTGNLTKHEL 482
H+GE+P+ C + C K++ + NL H R HTG KPY C+ C KAF+ + KH+
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 483 SAH 485
H
Sbjct: 121 RTH 123
Score = 127 bits (321), Expect = 7e-35
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 32/143 (22%)
Query: 95 ERPFRCEVCMKTFTQQPNLWKHMKT---HTGEKPYNCGMCD-----KAFTQRANLWGSWV 146
E R + C + F Q L H+ + H K + C + F +
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQY------- 53
Query: 147 CHPTAVRDLFLVNLGTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNC- 203
L H R HTGE+P +C E C K++++ NL H+++HTGEKPY C
Sbjct: 54 ------------MLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101
Query: 204 -GMCDKAFTQRANLLKHI-RVHT 224
C KAF+ ++ KH R H+
Sbjct: 102 HEGCSKAFSNASDRAKHQNRTHS 124
Score = 115 bits (290), Expect = 2e-30
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 24/117 (20%)
Query: 87 THERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDKAFTQRANLW 142
H R HTGE+P +C E C K++++ NL H+++HTGEKPY C C KAF+ ++
Sbjct: 57 VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDR- 115
Query: 143 GSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTG 197
H R H+ E+P+ C++ C K +T +L KH+KT G
Sbjct: 116 ---AKH--------------QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 55.3 bits (134), Expect = 2e-09
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 81 ERSRRSTH-ERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTG 122
S R+ H R H+ E+P+ C++ C K +T +L KH+KT G
Sbjct: 111 NASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 161 bits (410), Expect = 7e-48
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 344 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIR---VH 400
+G C C K F + L H + HTGEKP+ C C K + ++ NLL+H ++
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 401 TGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRH-ERVHTGV 459
E+ ++C +C + F ++ L H H+GE PY C C++ F+Q+ +L H ++H+G
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121
Query: 460 K 460
Sbjct: 122 S 122
Score = 157 bits (399), Expect = 2e-46
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 372 HTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRL---H 428
+G C C K F + L H R HTGE+P+ C CGK + ++ NL++H +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 429 SGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKHELSAH 485
E+ + C C +TF ++ L H HTG PY C C + F Q +L H + H
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 153 bits (388), Expect = 9e-45
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 23/137 (16%)
Query: 92 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTA 151
+G C C K F + L H + HTGEKP+ C C K + ++ NL
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENL---------- 51
Query: 152 VRDLFLVNLGTHER---IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDK 208
HE ++ E+ F C VC +TF ++ L HM +HTGE PY C C +
Sbjct: 52 ---------LEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ 102
Query: 209 AFTQRANLLKH-IRVHT 224
F Q+ +L H I++H+
Sbjct: 103 QFMQKKDLQSHMIKLHS 119
Score = 135 bits (342), Expect = 3e-38
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 43/154 (27%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
C C+K F L H R
Sbjct: 8 VECPTCHKKFLSKY---------------------------------------YLKVHNR 28
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMK---THTGEKPYNCGMCDKAFTQRANLLKHIRV 399
HTGE+PF C C K + ++ NL +H + E+ + C +C + F +R L H+
Sbjct: 29 KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS 88
Query: 400 HTGERPYSCKLCGKRFTQQANLVKH-NRLHSGER 432
HTGE PY C C ++F Q+ +L H +LHSG
Sbjct: 89 HTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 122 bits (308), Expect = 3e-33
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 23/122 (18%)
Query: 82 RSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK---THTGEKPYNCGMCDKAFTQR 138
+ H R HTGE+PF C C K + ++ NL +H + E+ + C +C + F +R
Sbjct: 20 KYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR 79
Query: 139 ANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTG 197
L H HTGE P++C C + F Q+ +L HM K H+G
Sbjct: 80 M-------------------ELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Query: 198 EK 199
Sbjct: 121 PS 122
Score = 107 bits (271), Expect = 3e-28
Identities = 40/211 (18%), Positives = 60/211 (28%), Gaps = 91/211 (43%)
Query: 167 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTEN 226
+G C C K F + L H + HTGEKP+ C C K + ++ ++ H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKE----NLLEHEAR 57
Query: 227 LKLYTRRKEEVEVEVDVCAGIYPLHQEGGVGLMGLPSHCCPGPIRKRKKKPRRDGTFVCK 286
+ ++ F C
Sbjct: 58 NCMNRS------------------------------------------EQV-----FTCS 70
Query: 287 VCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIHTG 346
VC +TF + L H HTG
Sbjct: 71 VCQETFRRRM---------------------------------------ELRLHMVSHTG 91
Query: 347 ERPFRCEVCMKTFTQQPNLWKHM-KTHTGEK 376
E P++C C + F Q+ +L HM K H+G
Sbjct: 92 EMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 88.7 bits (221), Expect = 2e-21
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 21/94 (22%)
Query: 81 ERSRRSTHER---IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQ 137
+ HE ++ E+ F C VC +TF ++ L HM +HTGE PY C C + F Q
Sbjct: 47 RKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQ 106
Query: 138 RANLWGSWVCHPTAVRDLFLVNLGTHERIHTGER 171
+ +L H ++H+G
Sbjct: 107 KKDL----QSH--------------MIKLHSGPS 122
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 156 bits (398), Expect = 3e-46
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 369 MKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLH 428
+G+K Y C C K+FT ++ +H+ +H G RPY C +CGK+F + +LV H ++H
Sbjct: 2 SSGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 429 SGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLT 478
+G +PY C C K F+ + + H V + K Y + + +
Sbjct: 61 TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 155 bits (395), Expect = 6e-46
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 341 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVH 400
+G++ + C+ C K+FT + +HM H G +PY CG+C K F + +L+ H+++H
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 401 TGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNL 449
TG +PY C +C KRF + + H + S + Y + + S
Sbjct: 61 TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 145 bits (369), Expect = 3e-42
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 22/128 (17%)
Query: 89 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCH 148
+G++ + C+ C K+FT + +HM H G +PY CG+C K F + +L
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLV------ 54
Query: 149 PTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDK 208
H +IHTG +P+ C +C K F + + H + K Y ++
Sbjct: 55 -------------GHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQ 99
Query: 209 AFTQRANL 216
T+ +
Sbjct: 100 NTTEASGP 107
Score = 126 bits (318), Expect = 6e-35
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 395
H +H G RP+ C VC K F + +L HMK HTG KPY C +C K F R +
Sbjct: 24 QRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF-- 81
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANL 421
H V + + Y + T+ +
Sbjct: 82 HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 119 bits (302), Expect = 1e-32
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 398 RVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHT 457
+G++ Y C+ CGK FT ++ +H +H G RPY C C K F + +L H ++HT
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 458 GVKPYSCKICWKAFAQTGNLTKH 480
G+KPY C IC K F + +H
Sbjct: 62 GIKPYECNICAKRFMWRDSFHRH 84
Score = 117 bits (297), Expect = 5e-32
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 117 MKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCE 176
+G+K Y C C K+FT ++ H +H G RP+ C
Sbjct: 2 SSGSSGDKLYPC-QCGKSFTHKSQR-------------------DRHMSMHLGLRPYGCG 41
Query: 177 VCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
VC K F + +L HMK HTG KPY C +C K F R + H V +
Sbjct: 42 VCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTS 87
Score = 116 bits (292), Expect = 3e-31
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 21/108 (19%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRAN 140
+S+R H +H G RP+ C VC K F + +L HMK HTG KPY C +C K F R +
Sbjct: 21 HKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDS 80
Query: 141 LWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNL 188
H + + + + + T+
Sbjct: 81 F---------------------HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 82.9 bits (206), Expect = 2e-19
Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 41/111 (36%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
+ C VC K F +L H +
Sbjct: 38 YGCGVCGKKFKMKH---------------------------------------HLVGHMK 58
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 393
IHTG +P+ C +C K F + + H + K Y ++ T+ +
Sbjct: 59 IHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 78.3 bits (194), Expect = 6e-18
Identities = 20/117 (17%), Positives = 33/117 (28%), Gaps = 47/117 (40%)
Query: 25 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSR 84
+ C VC K F +L
Sbjct: 38 YGCGVCGKKFKMKH-------------HLV------------------------------ 54
Query: 85 RSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 141
H +IHTG +P+ C +C K F + + H + K Y ++ T+ +
Sbjct: 55 --GHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 154 bits (393), Expect = 1e-45
Identities = 35/101 (34%), Positives = 50/101 (49%)
Query: 364 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVK 423
+K + C C + FT+ NLL H R HT ERPY+C +C K F +Q +L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
H +HS E+P+ C+ C K F Q L H+ +H +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 152 bits (388), Expect = 5e-45
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 395
++ F C+ C + FT+ NL H +THT E+PY C +C KAF ++ +L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
H +H+ E+P+ C+ CGK F Q L H LH
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 141 bits (359), Expect = 9e-41
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 19/118 (16%)
Query: 86 STHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSW 145
S ++ F C+ C + FT+ NL H +THT E+PY C +C KAF ++
Sbjct: 6 SGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD------ 59
Query: 146 VCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
+L H IH+ E+PF+C+ C K F Q L H H
Sbjct: 60 -------------HLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 131 bits (332), Expect = 7e-37
Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 19/113 (16%)
Query: 112 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGER 171
+K + C C + FT+ NL HER HT ER
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNL-------------------LIHERTHTDER 44
Query: 172 PFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
P+ C++C K F +Q +L H H+ EKP+ C C K F Q L H +H
Sbjct: 45 PYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97
Score = 129 bits (328), Expect = 2e-36
Identities = 32/89 (35%), Positives = 46/89 (51%)
Query: 392 NLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDR 451
++ + CK CG+ FT+ NL+ H R H+ ERPY C C K F +Q +L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
H +H+ KP+ C+ C K F Q+ L H
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVH 92
Score = 115 bits (290), Expect = 5e-31
Identities = 36/126 (28%), Positives = 48/126 (38%), Gaps = 39/126 (30%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
F+CK C + FT+S NL HER
Sbjct: 18 FICKFCGRHFTKSY---------------------------------------NLLIHER 38
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTG 402
HT ERP+ C++C K F +Q +L H H+ EKP+ C C K F Q L H +H
Sbjct: 39 THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98
Query: 403 ERPYSC 408
+
Sbjct: 99 TSSPTA 104
Score = 101 bits (254), Expect = 4e-26
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 22/96 (22%)
Query: 83 SRRST---HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRA 139
++ HER HT ERP+ C++C K F +Q +L H H+ EKP+ C C K F Q
Sbjct: 28 TKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSR 87
Query: 140 NLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
L H+ +H
Sbjct: 88 TLA-------------------VHKTLHMQTSSPTA 104
Score = 52.8 bits (128), Expect = 6e-09
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 447 SNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
S K + CK C + F ++ NL H
Sbjct: 3 SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH 36
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 154 bits (393), Expect = 2e-45
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 345 TGERPFRCE--VCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRANLLKHIRVH 400
+ +RPF C C K + + +L H + HTGEKPY C C++ F++ L +H R H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 401 TGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTFIQQSNLDRHERVH 456
TG +P+ CK C ++F++ +L H R H+GE+P+ CR+ C K F + L RH +H
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 149 bits (379), Expect = 2e-43
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 25/137 (18%)
Query: 93 TGERPFRCE--VCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRANLWGSWVCH 148
+ +RPF C C K + + +L H + HTGEKPY C C++ F++ L
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQL------- 54
Query: 149 PTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--C 206
H+R HTG +PF+C+ C + F++ +L H +THTGEKP++C C
Sbjct: 55 ------------KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSC 102
Query: 207 DKAFTQRANLLKHIRVH 223
K F + L++H +H
Sbjct: 103 QKKFARSDELVRHHNMH 119
Score = 148 bits (375), Expect = 6e-43
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 373 TGEKPYNC--GMCDKAFTQRANLLKHIRVHTGERPYSCKL--CGKRFTQQANLVKHNRLH 428
+ ++P+ C C+K + + ++L H R HTGE+PY C C +RF++ L +H R H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 429 SGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKI--CWKAFAQTGNLTKH 480
+G +P+ C+ C + F + +L H R HTG KP+SC+ C K FA++ L +H
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115
Score = 134 bits (340), Expect = 6e-38
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 336 NLGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 393
+L H R HTGE+P++C+ C + F++ L +H + HTG KP+ C C + F++ +L
Sbjct: 23 HLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL 82
Query: 394 LKHIRVHTGERPYSCKL--CGKRFTQQANLVKHNRLH 428
H R HTGE+P+SC+ C K+F + LV+H+ +H
Sbjct: 83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 120 bits (303), Expect = 9e-33
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 23/113 (20%)
Query: 87 THERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGS 144
H R HTGE+P++C+ C + F++ L +H + HTG KP+ C C + F++
Sbjct: 26 MHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD----- 80
Query: 145 WVCHPTAVRDLFLVNLGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTH 195
+L TH R HTGE+PF C C K F + L +H H
Sbjct: 81 --------------HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 114 bits (289), Expect = 8e-31
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 23/108 (21%)
Query: 121 TGEKPYNC--GMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEV- 177
+ ++P+ C C+K + + ++L H R HTGE+P++C+
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQ-------------------MHSRKHTGEKPYQCDFK 42
Query: 178 -CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
C + F++ L +H + HTG KP+ C C + F++ +L H R HT
Sbjct: 43 DCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90
Score = 55.2 bits (134), Expect = 1e-09
Identities = 23/92 (25%), Positives = 30/92 (32%), Gaps = 41/92 (44%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
F CK C + F++S +L TH R
Sbjct: 67 FQCKTCQRKFSRSD---------------------------------------HLKTHTR 87
Query: 343 IHTGERPFRCEV--CMKTFTQQPNLWKHMKTH 372
HTGE+PF C C K F + L +H H
Sbjct: 88 THTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 50.6 bits (122), Expect = 4e-08
Identities = 23/98 (23%), Positives = 30/98 (30%), Gaps = 47/98 (47%)
Query: 25 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSR 84
F CK C + F++S +L
Sbjct: 67 FQCKTCQRKFSRSD-------------HLK------------------------------ 83
Query: 85 RSTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTH 120
TH R HTGE+PF C C K F + L +H H
Sbjct: 84 --THTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 153 bits (388), Expect = 9e-45
Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 347 ERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGER 404
R C + C K F + KH+ TH G + + C C KAF + + L +H VHTGE+
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 405 PYSCKL--CGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTFIQQSNLDRHERVHTGVK 460
P+ C CGKRF+ NL H R+H+G+RPY C + C K F Q +NL H H K
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Query: 461 PY 462
Sbjct: 122 NN 123
Score = 136 bits (345), Expect = 1e-38
Identities = 39/103 (37%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRANL 393
+ H H G R C C K F + L +H HTGEKP+ C C K F+ NL
Sbjct: 22 AMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 80
Query: 394 LKHIRVHTGERPYSCKL--CGKRFTQQANLVKHNRLHSGERPY 434
H+R+HTG+RPY C C K+F Q NL H H+ +
Sbjct: 81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 134 bits (340), Expect = 7e-38
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 375 EKPYNCGM--CDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGER 432
+ C C K F + + KH+ H G R + C CGK F + + L +H +H+GE+
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 433 PYHCRY--CTKTFIQQSNLDRHERVHTGVKPYSCKI--CWKAFAQTGNLTKH 480
P+ C + C K F NL H R+HTG +PY C C K FAQ+ NL H
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113
Score = 134 bits (339), Expect = 1e-37
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 26/136 (19%)
Query: 95 ERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAV 152
R C + C K F + KH+ TH G + + C C KAF + + L
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKL----------- 50
Query: 153 RDLFLVNLGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDK 208
H+ +HTGE+PF+C C K F+ NL H++ HTG++PY C C+K
Sbjct: 51 --------KRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 102
Query: 209 AFTQRANLLKHIRVHT 224
F Q NL HI H
Sbjct: 103 KFAQSTNLKSHILTHA 118
Score = 127 bits (322), Expect = 2e-35
Identities = 42/119 (35%), Positives = 49/119 (41%), Gaps = 24/119 (20%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRANLWGS 144
H H G R C C K F + L +H HTGEKP+ C C K F+
Sbjct: 25 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF----- 78
Query: 145 WVCHPTAVRDLFLVNLGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPY 201
NL TH RIHTG+RP+ C C K F Q NL H+ TH K
Sbjct: 79 --------------NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 117 bits (296), Expect = 1e-31
Identities = 44/215 (20%), Positives = 61/215 (28%), Gaps = 100/215 (46%)
Query: 198 EKPYNCGM--CDKAFTQRANLLKHIRVHTENLKLYTRRKEEVEVEVDVCAGIYPLHQEGG 255
+ C C K F + + KH+ H
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGP------------------------------ 32
Query: 256 VGLMGLPSHCCPGPIRKRKKKPRRDGTFVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKI 315
+ VC C K F +SS
Sbjct: 33 --------------------RV-----HVCAECGKAFVESS------------------- 48
Query: 316 SWAHSERNISGWLEELPLLVNLGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHT 373
L H+ +HTGE+PF+C C K F+ NL H++ HT
Sbjct: 49 --------------------KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT 88
Query: 374 GEKPYNCGM--CDKAFTQRANLLKHIRVHTGERPY 406
G++PY C C+K F Q NL HI H +
Sbjct: 89 GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 91.4 bits (228), Expect = 3e-22
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 23/97 (23%)
Query: 81 ERSRRSTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFT 136
E S+ H+ +HTGE+PF+C C K F+ NL H++ HTG++PY C C+K F
Sbjct: 46 ESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA 105
Query: 137 QRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
Q NL +H H +
Sbjct: 106 QST-------------------NLKSHILTHAKAKNN 123
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 149 bits (378), Expect = 1e-43
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 371 THTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSG 430
+ P+ C +C K F+++ L H+R HTG +PY CK C ++L KH R+HS
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 431 ERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
ERP+ C+ C S L H R HTG S
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 146 bits (372), Expect = 9e-43
Identities = 35/93 (37%), Positives = 51/93 (54%)
Query: 344 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGE 403
P +CEVC K F+++ L HM+ HTG KPY C CD A ++L KH+R+H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 404 RPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
RP+ C++C + L H R H+G+
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 138 bits (351), Expect = 8e-40
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 19/113 (16%)
Query: 92 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTA 151
P +CEVC K F+++ L HM+ HTG KPY C CD A +
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSS------------ 50
Query: 152 VRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
+L H RIH+ ERPF+C++C L H+++HTG+ + G
Sbjct: 51 -------SLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSSG 96
Score = 127 bits (322), Expect = 1e-35
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 19/106 (17%)
Query: 119 THTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVC 178
+ P+ C +C K F+++ L TH R HTG +P++C+ C
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLK-------------------THMRCHTGVKPYKCKTC 42
Query: 179 MKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+L KH++ H+ E+P+ C +C A + L H+R HT
Sbjct: 43 DYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHT 88
Score = 121 bits (306), Expect = 2e-33
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 400 HTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGV 459
P+ C++CGK F+++ L H R H+G +PY C+ C S+L++H R+H+
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 460 KPYSCKICWKAFAQTGNLTKH 480
+P+ C+IC A + LT H
Sbjct: 63 RPFKCQICPYASRNSSQLTVH 83
Score = 116 bits (294), Expect = 9e-32
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 39/124 (31%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
C+VC K F++ L TH R H
Sbjct: 11 CEVCGKCFSRKD---------------------------------------KLKTHMRCH 31
Query: 345 TGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGER 404
TG +P++C+ C +L KH++ H+ E+P+ C +C A + L H+R HTG+
Sbjct: 32 TGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDS 91
Query: 405 PYSC 408
S
Sbjct: 92 GPSS 95
Score = 102 bits (258), Expect = 9e-27
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 19/94 (20%)
Query: 82 RSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 141
+ + TH R HTG +P++C+ C +L KH++ H+ E+P+ C +C A +
Sbjct: 21 KDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSS-- 78
Query: 142 WGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
L H R HTG+
Sbjct: 79 -----------------QLTVHLRSHTGDSGPSS 95
Score = 77.5 bits (192), Expect = 9e-18
Identities = 22/97 (22%), Positives = 33/97 (34%), Gaps = 39/97 (40%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
CK C+ SS +L H RIH
Sbjct: 39 CKTCDYAAADSS---------------------------------------SLNKHLRIH 59
Query: 345 TGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
+ ERPF+C++C L H+++HTG+ + G
Sbjct: 60 SDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSSG 96
Score = 75.2 bits (186), Expect = 6e-17
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+ S + H RIH+ ERPF+C++C L H+++HTG+ + G
Sbjct: 48 DSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSSG 96
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 123 bits (312), Expect = 2e-34
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 344 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGE 403
+G CE+C K F +L +H +H+GEKPY+C +C F ++ + H+R H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 404 --RPYSCKLCGKRFTQQANLVKHN-RLHSGER 432
+PY C+ CGK F++ +L H ++HSG
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 123 bits (312), Expect = 3e-34
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 372 HTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGE 431
+G C +C K F +L +H H+GE+PYSC +CG RF ++ + H R H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 432 --RPYHCRYCTKTFIQQSNLDRHE-RVHTGVK 460
+PY C+ C K F + +L+ H +VH+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 116 bits (294), Expect = 1e-31
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 92 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTA 151
+G CE+C K F +L +H +H+GEKPY+C +C F ++
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKD------------ 49
Query: 152 VRDLFLVNLGTHERIHTGE--RPFRCEVCMKTFTQQPNLWKHMK-THTGEK 199
+ H R H G +P+ C+ C K F++ +L H+K H+G
Sbjct: 50 -------RMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 115 bits (290), Expect = 4e-31
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 400 HTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTG- 458
+G +C++CGK F +L +H HSGE+PY C C F ++ + H R H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 459 -VKPYSCKICWKAFAQTGNLTKHELSAH 485
KPY C+ C K F++ +L H H
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 112 bits (284), Expect = 2e-30
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 22/108 (20%)
Query: 120 HTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCM 179
+G C +C K F +L H+ H+GE+P+ C VC
Sbjct: 2 SSGSSGVACEICGKIFRDVYHL-------------------NRHKLSHSGEKPYSCPVCG 42
Query: 180 KTFTQQPNLWKHMKTHTGE--KPYNCGMCDKAFTQRANLLKHI-RVHT 224
F ++ + H+++H G KPY C C K F++ +L HI +VH+
Sbjct: 43 LRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 97.2 bits (243), Expect = 1e-24
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 42/125 (33%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
C++C K F +L H+
Sbjct: 8 VACEICGKIFRDVY---------------------------------------HLNRHKL 28
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGE--KPYNCGMCDKAFTQRANLLKHI-RV 399
H+GE+P+ C VC F ++ + H+++H G KPY C C K F++ +L HI +V
Sbjct: 29 SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQV 88
Query: 400 HTGER 404
H+G
Sbjct: 89 HSGPS 93
Score = 91.8 bits (229), Expect = 9e-23
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 167 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT-E 225
+G CE+C K F +L +H +H+GEKPY+C +C F ++ + H+R H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 226 NLKLYT 231
K Y
Sbjct: 62 VGKPYI 67
Score = 84.5 bits (210), Expect = 4e-20
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 20/87 (22%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGE--KPYNCGMCDKAFTQRANLWGS 144
H+ H+GE+P+ C VC F ++ + H+++H G KPY C C K F++ +L
Sbjct: 25 RHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL--- 81
Query: 145 WVCHPTAVRDLFLVNLGTHERIHTGER 171
H +++H+G
Sbjct: 82 -NGH--------------IKQVHSGPS 93
Score = 56.0 bits (136), Expect = 3e-10
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 82 RSRRSTHERIHTGE--RPFRCEVCMKTFTQQPNLWKHMK-THTGEK 124
+ R S H R H G +P+ C+ C K F++ +L H+K H+G
Sbjct: 48 KDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 121 bits (307), Expect = 1e-33
Identities = 33/88 (37%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 347 ERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGER 404
ERP+ C V C + F+Q +L +H++ HTG+KP+ C +C + F++ +L HIR HTGE+
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 405 PYSCKLCGKRFTQQANLVKHNRLHSGER 432
P++C +CG++F + +H ++H ++
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 121 bits (307), Expect = 1e-33
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 375 EKPYNCGM--CDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGER 432
E+PY C + CD+ F+Q +L +HIR+HTG++P+ C++C + F++ +L H R H+GE+
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 433 PYHCRYCTKTFIQQSNLDRHERVHTGVK 460
P+ C C + F + RH ++H K
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 116 bits (294), Expect = 8e-32
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 21/107 (19%)
Query: 95 ERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAV 152
ERP+ C V C + F+Q +L +H++ HTG+KP+ C +C + F++ +L
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHL----------- 50
Query: 153 RDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 199
TH R HTGE+PF C++C + F + +H K H +K
Sbjct: 51 --------TTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 115 bits (290), Expect = 3e-31
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 21/104 (20%)
Query: 123 EKPYNCGM--CDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMK 180
E+PY C + CD+ F+Q +L H RIHTG++PF+C +CM+
Sbjct: 2 ERPYACPVESCDRRFSQSGSL-------------------TRHIRIHTGQKPFQCRICMR 42
Query: 181 TFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
F++ +L H++THTGEKP+ C +C + F + +H ++H
Sbjct: 43 NFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHL 86
Score = 109 bits (275), Expect = 3e-29
Identities = 27/69 (39%), Positives = 47/69 (68%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 395
+L H RIHTG++PF+C +CM+ F++ +L H++THTGEKP+ C +C + F + +
Sbjct: 21 SLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR 80
Query: 396 HIRVHTGER 404
H ++H ++
Sbjct: 81 HTKIHLRQK 89
Score = 108 bits (272), Expect = 9e-29
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 403 ERPYSCKL--CGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVK 460
ERPY+C + C +RF+Q +L +H R+H+G++P+ CR C + F + +L H R HTG K
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 461 PYSCKICWKAFAQTGNLTKH 480
P++C IC + FA++ +H
Sbjct: 62 PFACDICGRKFARSDERKRH 81
Score = 97.2 bits (243), Expect = 1e-24
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 19/85 (22%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWV 146
H RIHTG++PF+C +CM+ F++ +L H++THTGEKP+ C +C + F +
Sbjct: 24 RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD------- 76
Query: 147 CHPTAVRDLFLVNLGTHERIHTGER 171
H +IH ++
Sbjct: 77 ------------ERKRHTKIHLRQK 89
Score = 69.4 bits (171), Expect = 5e-15
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 39/94 (41%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
F C++C + F++S +L TH R
Sbjct: 35 FQCRICMRNFSRSD---------------------------------------HLTTHIR 55
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
HTGE+PF C++C + F + +H K H +K
Sbjct: 56 THTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 65.2 bits (160), Expect = 2e-13
Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 45/100 (45%)
Query: 25 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSR 84
F C++C + F++S +LT
Sbjct: 35 FQCRICMRNFSRSD-------------HLT------------------------------ 51
Query: 85 RSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 124
TH R HTGE+PF C++C + F + +H K H +K
Sbjct: 52 --THIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 120 bits (303), Expect = 4e-33
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 378 YNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCR 437
++C +C K+F + + L H+ +H+ RPY C+ CGKRF Q++++ KH +H+GE+P+ C+
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 438 YCTKTFIQQSNLDRHERVHTG 458
C K F Q SNL H R HTG
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 115 bits (292), Expect = 1e-31
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 350 FRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCK 409
F C++C K+F + L H+ H+ +PY C C K F Q++++ KH +HTGE+P+ C+
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 410 LCGKRFTQQANLVKHNRLHSG 430
+CGK F+Q +NL+ H+R H+G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 111 bits (281), Expect = 5e-30
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 406 YSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCK 465
+ CK+CGK F + + L H +HS RPY C+YC K F Q+S++ +H +HTG KP+ C+
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 466 ICWKAFAQTGNLTKH 480
+C KAF+Q+ NL H
Sbjct: 62 VCGKAFSQSSNLITH 76
Score = 106 bits (268), Expect = 2e-28
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 19/99 (19%)
Query: 126 YNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQ 185
++C +C K+F + + L TH IH+ RP+ C+ C K F Q+
Sbjct: 2 FDCKICGKSFKRSSTL-------------------STHLLIHSDTRPYPCQYCGKRFHQK 42
Query: 186 PNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
++ KH HTGEKP+ C +C KAF+Q +NL+ H R HT
Sbjct: 43 SDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT 81
Score = 106 bits (267), Expect = 3e-28
Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 39/121 (32%)
Query: 282 TFVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHE 341
+F CK+C K+F +SS L TH
Sbjct: 1 SFDCKICGKSFKRSS---------------------------------------TLSTHL 21
Query: 342 RIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 401
IH+ RP+ C+ C K F Q+ ++ KH HTGEKP+ C +C KAF+Q +NL+ H R HT
Sbjct: 22 LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT 81
Query: 402 G 402
G
Sbjct: 82 G 82
Score = 102 bits (256), Expect = 1e-26
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 19/100 (19%)
Query: 98 FRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFL 157
F C++C K+F + L H+ H+ +PY C C K F Q++
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKS------------------ 43
Query: 158 VNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTG 197
++ H IHTGE+P +C+VC K F+Q NL H + HTG
Sbjct: 44 -DMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 94.0 bits (235), Expect = 1e-23
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 19/88 (21%)
Query: 82 RSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 141
S STH IH+ RP+ C+ C K F Q+ ++ KH HTGEKP+ C +C KAF+Q +
Sbjct: 14 SSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSS-- 71
Query: 142 WGSWVCHPTAVRDLFLVNLGTHERIHTG 169
NL TH R HTG
Sbjct: 72 -----------------NLITHSRKHTG 82
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 118 bits (299), Expect = 1e-32
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGE----KPYNCGMCDKAFTQRA 391
+ G+ R HTGE+P+ C C KTF Q+ L H K + + C C K FT+R
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 392 NLLKHIRVHTGERPYSCKLCGKRF 415
+ +H G + G
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 112 bits (282), Expect = 4e-30
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 392 NLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGE----RPYHCRYCTKTFIQQS 447
+ R HTGE+PY+C C K F Q+ L H + + + C C KTF +++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 448 NLDRHERVHTGVKPYSCKICWKAF 471
+ RH G + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 108 bits (273), Expect = 6e-29
Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 23/103 (22%)
Query: 112 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGE- 170
+ +THTGEKPY C CDK F Q+ L H + +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLL-------------------DMHFKRYHDPN 42
Query: 171 ---RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAF 210
F C C KTFT++ + +H G +
Sbjct: 43 FVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 101 bits (253), Expect = 3e-26
Identities = 24/100 (24%), Positives = 33/100 (33%), Gaps = 23/100 (23%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGE----KPYNCGMCDKAFTQRANLW 142
+ R HTGE+P+ C C KTF Q+ L H K + + C C K FT+R
Sbjct: 5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN--- 61
Query: 143 GSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTF 182
+ H G E +
Sbjct: 62 ----------------TMARHADNCAGPDGVEGENSGPSS 85
Score = 94.9 bits (237), Expect = 5e-24
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 159 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGE----KPYNCGMCDKAFTQRA 214
+ G+ R HTGE+P+ C C KTF Q+ L H K + + C C K FT+R
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 215 NLLKHIRVHT 224
+ +H
Sbjct: 62 TMARHADNCA 71
Score = 83.3 bits (207), Expect = 7e-20
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 420 NLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTG----VKPYSCKICWKAFAQTG 475
+ R H+GE+PY C +C KTF Q+ LD H + + + C C K F +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 476 NLTKHE 481
+ +H
Sbjct: 62 TMARHA 67
Score = 76.4 bits (189), Expect = 1e-17
Identities = 17/109 (15%), Positives = 26/109 (23%), Gaps = 43/109 (39%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
+ C C+KTF Q L H +
Sbjct: 16 YACSHCDKTFRQKQ---------------------------------------LLDMHFK 36
Query: 343 IHTGE----RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAF 387
+ F C C KTFT++ + +H G +
Sbjct: 37 RYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 75.3 bits (186), Expect = 4e-17
Identities = 28/173 (16%), Positives = 37/173 (21%), Gaps = 89/173 (51%)
Query: 187 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTENLKLYTRRKEEVEVEVDVCAG 246
+ +THTGEKPY C CDK F Q+ L H + +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH---------------------- 39
Query: 247 IYPLHQEGGVGLMGLPSHCCPGPIRKRKKKPRRDGTFVCKVCNKTFTQSSWGHKGLTKSR 306
P FVC C KTFT+ +
Sbjct: 40 ---------------------DP--NFVPAA-----FVCSKCGKTFTRRN---------- 61
Query: 307 DIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIHTGERPFRCEVCMKTF 359
+ H G E +
Sbjct: 62 -----------------------------TMARHADNCAGPDGVEGENSGPSS 85
Score = 73.7 bits (182), Expect = 2e-16
Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Query: 82 RSRRSTHERIHTGE----RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAF 135
+ H + + F C C KTFT++ + +H G +
Sbjct: 28 KQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 114 bits (287), Expect = 6e-31
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 348 RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYS 407
+PF+C +CM+ F++ +L H++THTGEKP+ C +C + F + +H + P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60
Query: 408 CKLCGKRFTQQANLVKHN---RLHSGER 432
+ ++ +L + GER
Sbjct: 61 EDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 109 bits (274), Expect = 5e-29
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYH 435
KP+ C +C + F++ +L HIR HTGE+P++C +CG++F + +H + P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPIL 60
Query: 436 CRYCTKTFIQQSNLDRHE---RVHTGVK 460
+ + +L+ + G +
Sbjct: 61 EDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 108 bits (272), Expect = 8e-29
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 23/107 (21%)
Query: 96 RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDL 155
+PF+C +CM+ F++ +L H++THTGEKP+ C +C + F +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD---------------- 45
Query: 156 FLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKH---MKTHTGEK 199
H I P + + ++ +L +K GE+
Sbjct: 46 ---ERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 100 bits (252), Expect = 5e-26
Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 23/104 (22%)
Query: 124 KPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFT 183
KP+ C +C + F++ +L TH R HTGE+PF C++C + F
Sbjct: 2 KPFQCRICMRNFSRSDHL-------------------TTHIRTHTGEKPFACDICGRKFA 42
Query: 184 QQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHI---RVHT 224
+ +H P ++ ++ +L + +
Sbjct: 43 RSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLV 85
Score = 100 bits (251), Expect = 7e-26
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 404 RPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYS 463
+P+ C++C + F++ +L H R H+GE+P+ C C + F + RH + P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPIL 60
Query: 464 CKICWKAFAQTGNLTKH 480
+ ++ +L
Sbjct: 61 EDKVEELLSKNYHLENE 77
Score = 96.4 bits (241), Expect = 2e-24
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 43/125 (34%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
F C++C + F++S +L TH R
Sbjct: 4 FQCRICMRNFSRSD---------------------------------------HLTTHIR 24
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHI---RV 399
HTGE+PF C++C + F + +H P ++ ++ +L + +
Sbjct: 25 THTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKK 83
Query: 400 HTGER 404
GER
Sbjct: 84 LVGER 88
Score = 88.3 bits (220), Expect = 1e-21
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 17/85 (20%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWV 146
TH R HTGE+PF C++C + F + +H P ++ ++ +L
Sbjct: 21 THIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLE---- 75
Query: 147 CHPTAVRDLFLVNLGTHERIHTGER 171
N + GER
Sbjct: 76 ------------NEVARLKKLVGER 88
Score = 86.4 bits (215), Expect = 6e-21
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 171 RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTE 225
+PF+C +CM+ F++ +L H++THTGEKP+ C +C + F + +H +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI 56
Score = 53.3 bits (129), Expect = 3e-09
Identities = 8/47 (17%), Positives = 15/47 (31%), Gaps = 4/47 (8%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKH---MKTHTGEK 124
R H I P + + ++ +L +K GE+
Sbjct: 43 RSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 37.5 bits (88), Expect = 9e-04
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 459 VKPYSCKICWKAFAQTGNLTKH 480
+KP+ C+IC + F+++ +LT H
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTH 22
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 112 bits (283), Expect = 2e-30
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 395
+ H + ++P++C+ C +F + NL H HTGEKPY C +C F + ANL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 396 HIRVHTGERPY 406
H R+H+GE+PY
Sbjct: 64 HTRIHSGEKPY 74
Score = 111 bits (281), Expect = 3e-30
Identities = 32/71 (45%), Positives = 42/71 (59%)
Query: 364 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVK 423
+ H +KPY C C +F + NL H VHTGE+PY C +CG +F + ANL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 424 HNRLHSGERPY 434
H R+HSGE+PY
Sbjct: 64 HTRIHSGEKPY 74
Score = 104 bits (262), Expect = 2e-27
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 392 NLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDR 451
+ H + ++PY C C F + NL H +H+GE+PY C C F + +NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 452 HERVHTGVKPY 462
H R+H+G KPY
Sbjct: 64 HTRIHSGEKPY 74
Score = 102 bits (258), Expect = 5e-27
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 112 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGER 171
+ H +KPY C C +F + NL +H+ +HTGE+
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLA-------------------SHKTVHTGEK 44
Query: 172 PFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 201
P+RC +C F + NL H + H+GEKPY
Sbjct: 45 PYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 101 bits (254), Expect = 2e-26
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 159 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 218
+ H + ++P++C+ C +F + NL H HTGEKPY C +C F + ANL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 219 HIRVHT 224
H R+H+
Sbjct: 64 HTRIHS 69
Score = 99.8 bits (250), Expect = 6e-26
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 19/91 (20%)
Query: 83 SRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLW 142
H + ++P++C+ C +F + NL H HTGEKPY C +C F + A
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPA--- 59
Query: 143 GSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
NL TH RIH+GE+P+
Sbjct: 60 ----------------NLKTHTRIHSGEKPY 74
Score = 88.7 bits (221), Expect = 5e-22
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 420 NLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTK 479
+ H+ + ++PY C C +F + NL H+ VHTG KPY C IC F + NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 480 H 480
H
Sbjct: 64 H 64
Score = 69.8 bits (172), Expect = 3e-15
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 126
+ ++H+ +HTGE+P+RC +C F + NL H + H+GEKPY
Sbjct: 29 YKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 53.2 bits (129), Expect = 2e-09
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 447 SNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+ H + KPY C C +F GNL H
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH 36
Score = 30.1 bits (69), Expect = 0.23
Identities = 13/66 (19%), Positives = 19/66 (28%), Gaps = 39/66 (59%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
C +C F + + NL TH RIH
Sbjct: 48 CNICGAQFNRPA---------------------------------------NLKTHTRIH 68
Query: 345 TGERPF 350
+GE+P+
Sbjct: 69 SGEKPY 74
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 110 bits (279), Expect = 8e-30
Identities = 31/74 (41%), Positives = 40/74 (54%)
Query: 389 QRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSN 448
+ + R Y C CGK F+ ++L KH R H+GE+PY C C K FIQ+S+
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 449 LDRHERVHTGVKPY 462
L H RVHTG P
Sbjct: 62 LIGHHRVHTGSGPS 75
Score = 110 bits (278), Expect = 9e-30
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 361 QQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQAN 420
+ + + Y C C K+F+ ++L KH R HTGE+PY C CGK F Q+++
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 421 LVKHNRLHSGERPY 434
L+ H+R+H+G P
Sbjct: 62 LIGHHRVHTGSGPS 75
Score = 110 bits (278), Expect = 1e-29
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 395
+ G E R ++C+ C K+F+ +L KH +THTGEKPY C C KAF QR++L+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 396 HIRVHTGERPY 406
H RVHTG P
Sbjct: 65 HHRVHTGSGPS 75
Score = 99.1 bits (248), Expect = 1e-25
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 159 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 218
+ G E R ++C+ C K+F+ +L KH +THTGEKPY C C KAF QR++L+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 219 HIRVHT 224
H RVHT
Sbjct: 65 HHRVHT 70
Score = 98.3 bits (246), Expect = 2e-25
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 19/93 (20%)
Query: 109 QQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHT 168
+ + + Y C C K+F+ ++L H R HT
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDL-------------------SKHRRTHT 42
Query: 169 GERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 201
GE+P++C+ C K F Q+ +L H + HTG P
Sbjct: 43 GEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 97.5 bits (244), Expect = 5e-25
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 19/91 (20%)
Query: 83 SRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLW 142
E R ++C+ C K+F+ +L KH +THTGEKPY C C KAF QR++L
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 143 GSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
H R+HTG P
Sbjct: 64 -------------------GHHRVHTGSGPS 75
Score = 89.8 bits (224), Expect = 3e-22
Identities = 24/64 (37%), Positives = 30/64 (46%)
Query: 417 QQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGN 476
+ + R Y C C K+F S+L +H R HTG KPY C C KAF Q +
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 477 LTKH 480
L H
Sbjct: 62 LIGH 65
Score = 66.7 bits (164), Expect = 3e-14
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 82 RSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 126
S S H R HTGE+P++C+ C K F Q+ +L H + HTG P
Sbjct: 31 SSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 59.8 bits (146), Expect = 9e-12
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 184 QQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ + + Y C C K+F+ ++L KH R HT
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 42
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 109 bits (274), Expect = 4e-29
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGE--KPYNCGMCDKAFTQRANL 393
+ G+ R H+GE+P+ C +C FTQ + H+ E ++C CD ++++L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 394 LKHIR-VHTGERPYS 407
H+R H+ P S
Sbjct: 62 GVHLRKQHSYSGPSS 76
Score = 107 bits (270), Expect = 1e-28
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 364 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGE--RPYSCKLCGKRFTQQANL 421
+ +TH+GEKPY C +C FTQ + HI E + C C ++++L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 422 VKHNR-LHSGERPY 434
H R HS P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 102 bits (258), Expect = 5e-27
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 392 NLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGE--RPYHCRYCTKTFIQQSNL 449
+ R H+GE+PY C +C RFTQ + H E +HC +C ++S+L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 450 DRHER-VHTGVKPYS 463
H R H+ P S
Sbjct: 62 GVHLRKQHSYSGPSS 76
Score = 99.1 bits (248), Expect = 1e-25
Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 22/93 (23%)
Query: 112 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGE- 170
+ +TH+GEKPY C +C FTQ + H E
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSG-------------------TMKMHILQKHTEN 42
Query: 171 -RPFRCEVCMKTFTQQPNLWKHMKT-HTGEKPY 201
F C C ++ +L H++ H+ P
Sbjct: 43 VAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 96.4 bits (241), Expect = 1e-24
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 159 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGE--KPYNCGMCDKAFTQRANL 216
+ G+ R H+GE+P+ C +C FTQ + H+ E ++C CD ++++L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 217 LKHIR-VHT 224
H+R H+
Sbjct: 62 GVHLRKQHS 70
Score = 91.4 bits (228), Expect = 7e-23
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 22/90 (24%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGE--KPYNCGMCDKAFTQRANLWGS 144
+ R H+GE+P+ C +C FTQ + H+ E ++C CD +++
Sbjct: 5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS----- 59
Query: 145 WVCHPTAVRDLFLVNLGTHER-IHTGERPF 173
+LG H R H+ P
Sbjct: 60 --------------DLGVHLRKQHSYSGPS 75
Score = 86.4 bits (215), Expect = 4e-21
Identities = 20/73 (27%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 420 NLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTG--VKPYSCKICWKAFAQTGNL 477
+ R HSGE+PY C C F Q + H V + C C A+ +L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 478 TKHELSAHGIGKP 490
H H P
Sbjct: 62 GVHLRKQHSYSGP 74
Score = 66.4 bits (163), Expect = 5e-14
Identities = 15/99 (15%), Positives = 25/99 (25%), Gaps = 42/99 (42%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
+ C +C+ FTQS + H
Sbjct: 16 YECYICHARFTQSG---------------------------------------TMKMHIL 36
Query: 343 IHTGE--RPFRCEVCMKTFTQQPNLWKHMKT-HTGEKPY 378
E F C C ++ +L H++ H+ P
Sbjct: 37 QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 61.4 bits (150), Expect = 2e-12
Identities = 15/105 (14%), Positives = 25/105 (23%), Gaps = 48/105 (45%)
Query: 25 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSR 84
+ C +C+ FTQS +
Sbjct: 16 YECYICHARFTQSG-------------TMK------------------------------ 32
Query: 85 RSTHERIHTGE--RPFRCEVCMKTFTQQPNLWKHMKT-HTGEKPY 126
H E F C C ++ +L H++ H+ P
Sbjct: 33 --MHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 61.4 bits (150), Expect = 2e-12
Identities = 25/166 (15%), Positives = 36/166 (21%), Gaps = 94/166 (56%)
Query: 187 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT-ENLKLYTRRKEEVEVEVDVCA 245
+ +TH+GEKPY C +C FTQ + HI EN+ +
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFH-------------- 47
Query: 246 GIYPLHQEGGVGLMGLPSHCCPGPIRKRKKKPRRDGTFVCKVCNKTFTQSSWGHKGLTKS 305
C C+ + S
Sbjct: 48 ---------------------------------------CPHCDTVIARKS--------- 59
Query: 306 RDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER-IHTGERPF 350
+LG H R H+ P
Sbjct: 60 ------------------------------DLGVHLRKQHSYSGPS 75
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 108 bits (273), Expect = 4e-29
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 365 LWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKH 424
H+GEKPY C C KAF++ + L++H RVHTGE+PY C CGK F+Q + L+ H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 425 NRLHSGERPY 434
R+H+
Sbjct: 62 QRIHTSGPSS 71
Score = 107 bits (269), Expect = 2e-28
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 393 LLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRH 452
+H+GE+PY C CGK F++ + LV+H R+H+GE+PY C C K F Q S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 453 ERVHTGVKPY 462
+R+HT
Sbjct: 62 QRIHTSGPSS 71
Score = 106 bits (267), Expect = 2e-28
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 337 LGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKH 396
IH+GE+P+ C C K F++ L +H + HTGEKPY C C KAF+Q + L+ H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 397 IRVHTGERPY 406
R+HT
Sbjct: 62 QRIHTSGPSS 71
Score = 95.2 bits (238), Expect = 2e-24
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 160 LGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKH 219
IH+GE+P+ C C K F++ L +H + HTGEKPY C C KAF+Q + L+ H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 220 IRVHT 224
R+HT
Sbjct: 62 QRIHT 66
Score = 94.1 bits (235), Expect = 7e-24
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 19/88 (21%)
Query: 86 STHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSW 145
S IH+GE+P+ C C K F++ L +H + HTGEKPY C C KAF+Q +
Sbjct: 3 SGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNS------ 56
Query: 146 VCHPTAVRDLFLVNLGTHERIHTGERPF 173
L H+RIHT
Sbjct: 57 -------------GLINHQRIHTSGPSS 71
Score = 93.7 bits (234), Expect = 9e-24
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 19/89 (21%)
Query: 113 LWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERP 172
H+GEKPY C C KAF++ + L H+R+HTGE+P
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSIL-------------------VQHQRVHTGEKP 42
Query: 173 FRCEVCMKTFTQQPNLWKHMKTHTGEKPY 201
++C C K F+Q L H + HT
Sbjct: 43 YKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 89.1 bits (222), Expect = 4e-22
Identities = 29/61 (47%), Positives = 37/61 (60%)
Query: 421 LVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+ +HSGE+PY C C K F + S L +H+RVHTG KPY C C KAF+Q L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 481 E 481
+
Sbjct: 62 Q 62
Score = 66.7 bits (164), Expect = 3e-14
Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 39/96 (40%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
+ C C K F++SS L H+R
Sbjct: 15 YGCVECGKAFSRSS---------------------------------------ILVQHQR 35
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 378
+HTGE+P++C C K F+Q L H + HT
Sbjct: 36 VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 65.2 bits (160), Expect = 9e-14
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 83 SRRST---HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 126
SR S H+R+HTGE+P++C C K F+Q L H + HT
Sbjct: 25 SRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 27.8 bits (63), Expect = 1.5
Identities = 6/17 (35%), Positives = 7/17 (41%)
Query: 82 RSRRSTHERIHTGERPF 98
S H+RIHT
Sbjct: 55 NSGLINHQRIHTSGPSS 71
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 109 bits (275), Expect = 4e-29
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 358 TFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKL--CGKRF 415
+ + + H + P C K +T+ ++L H+R HTGE+PY C C RF
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 416 TQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHT 457
+ L +H R H+G +P+ C C ++F + +L H + H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 106 bits (267), Expect = 6e-28
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 386 AFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTF 443
+ L+ R+H + P C K +T+ ++L H R H+GE+PY C + C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 444 IQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+ L RH R HTG KP+ C +C ++F+++ +L H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALH 94
Score = 104 bits (262), Expect = 3e-27
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 25/121 (20%)
Query: 106 TFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHER 165
+ + + H + P C K +T+ ++L H R
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHL-------------------KAHLR 38
Query: 166 IHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVH 223
HTGE+P++C E C F + L +H + HTG KP+ CG+C+++F++ +L H++ H
Sbjct: 39 THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Query: 224 T 224
Sbjct: 99 Q 99
Score = 102 bits (256), Expect = 2e-26
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRANL 393
RIH + P C K +T+ +L H++THTGEKPY C CD F + L
Sbjct: 8 PDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63
Query: 394 LKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLH 428
+H R HTG +P+ C +C + F++ +L H + H
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 97.7 bits (244), Expect = 9e-25
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQR 138
RIH + P C K +T+ +L H++THTGEKPY C CD F +
Sbjct: 5 SSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR- 59
Query: 139 ANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHT 196
L H R HTG +PF+C VC ++F++ +L HMK H
Sbjct: 60 ------------------SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 90.8 bits (226), Expect = 2e-22
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 336 NLGTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 393
+L H R HTGE+P++C E C F + L +H + HTG KP+ CG+C+++F++ +L
Sbjct: 32 HLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL 91
Query: 394 LKHIRVHT 401
H++ H
Sbjct: 92 ALHMKRHQ 99
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 108 bits (273), Expect = 6e-29
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 372 HTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKL--CGKRFTQQANLVKHNRLHS 429
T + C K +T+ ++L H+R HTGE+PY C CG +F + L +H R H+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 430 GERPYHCRYCTKTFIQQSNLDRHERVH 456
G RP+ C+ C + F + +L H + H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 104 bits (263), Expect = 2e-27
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 344 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRANLLKHIRVHT 401
T C KT+T+ +L H++THTGEKPY+C C F + L +H R HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 402 GERPYSCKLCGKRFTQQANLVKHNRLH 428
G RP+ C+ C + F++ +L H + H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 104 bits (263), Expect = 2e-27
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 400 HTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTFIQQSNLDRHERVHT 457
T CGK +T+ ++L H R H+GE+PYHC + C F + L RH R HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 458 GVKPYSCKICWKAFAQTGNLTKH 480
G +P+ C+ C +AF+++ +L H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALH 84
Score = 99.1 bits (248), Expect = 2e-25
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 21/106 (19%)
Query: 120 HTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC--EV 177
T + C K +T+ ++L H R HTGE+P+ C +
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHL-------------------KAHLRTHTGEKPYHCDWDG 42
Query: 178 CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVH 223
C F + L +H + HTG +P+ C CD+AF++ +L H++ H
Sbjct: 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 94.9 bits (237), Expect = 6e-24
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 21/106 (19%)
Query: 92 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRANLWGSWVCHP 149
T C KT+T+ +L H++THTGEKPY+C C F +
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSD---------- 51
Query: 150 TAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTH 195
L H R HTG RPF+C+ C + F++ +L HMK H
Sbjct: 52 ---------ELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 86.4 bits (215), Expect = 6e-21
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 336 NLGTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 393
+L H R HTGE+P+ C + C F + L +H + HTG +P+ C CD+AF++ +L
Sbjct: 22 HLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL 81
Query: 394 LKHIRVH 400
H++ H
Sbjct: 82 ALHMKRH 88
Score = 75.3 bits (186), Expect = 5e-17
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 87 THERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 141
H R HTGE+P+ C + C F + L +H + HTG +P+ C CD+AF++ +L
Sbjct: 25 AHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL 81
Score = 69.1 bits (170), Expect = 7e-15
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 167 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRANLLKHIRVHT 224
T C KT+T+ +L H++THTGEKPY+C C F + L +H R HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Score = 52.9 bits (128), Expect = 3e-09
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 86 STHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTH 120
+ H R HTG RPF+C+ C + F++ +L HMK H
Sbjct: 54 TRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 104 bits (262), Expect = 1e-27
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 344 HTGERPFRCEV--CMKTFTQQPNLWKHMK-THTGEKPYNC--GMCDKAFTQRANLLKHIR 398
+G C+ C + F+ + L H K H +K ++C C K+F + +L +H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 399 VHTGERPYSCKLCGKRF 415
+H+ R Y C+ G
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 102 bits (256), Expect = 1e-26
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 372 HTGEKPYNCGM--CDKAFTQRANLLKHIRV-HTGERPYSCK--LCGKRFTQQANLVKHNR 426
+G C C + F+ R L H + H ++ +SC CGK F + +L +H +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 427 LHSGERPYHCRYCTKTF 443
LHS R Y C + +
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 97.6 bits (244), Expect = 4e-25
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 400 HTGERPYSCKL--CGKRFTQQANLVKHNRL-HSGERPYHC--RYCTKTFIQQSNLDRHER 454
+G C CG+ F+ + L H + H ++ + C C K+F + +L H +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 455 VHTGVKPYSCKICWKAF 471
+H+ + Y C+ +
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 90.3 bits (225), Expect = 2e-22
Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 24/96 (25%)
Query: 120 HTGEKPYNCGM--CDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERI-HTGERPFRCE 176
+G C C + F+ R L H++ H ++ F C
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYL-------------------NHHKKYQHIHQKSFSCP 42
Query: 177 --VCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAF 210
C K+F + +L +HMK H+ + Y C +
Sbjct: 43 EPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 89.9 bits (224), Expect = 2e-22
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 24/96 (25%)
Query: 92 HTGERPFRCEV--CMKTFTQQPNLWKHMK-THTGEKPYNC--GMCDKAFTQRANLWGSWV 146
+G C+ C + F+ + L H K H +K ++C C K+F +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKK------- 54
Query: 147 CHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTF 182
+L H ++H+ R + CE +
Sbjct: 55 ------------HLKEHMKLHSDTRDYICEFSGPSS 78
Score = 78.7 bits (195), Expect = 2e-18
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 167 HTGERPFRCEV--CMKTFTQQPNLWKHMK-THTGEKPYNC--GMCDKAFTQRANLLKHIR 221
+G C+ C + F+ + L H K H +K ++C C K+F + +L +H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 222 VHT 224
+H+
Sbjct: 62 LHS 64
Score = 71.8 bits (177), Expect = 6e-16
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 82 RSRRSTHERI-HTGERPFRCE--VCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAF 135
R + H++ H ++ F C C K+F + +L +HMK H+ + Y C +
Sbjct: 22 RQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 66.0 bits (162), Expect = 6e-14
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 428 HSGERPYHCRY--CTKTFIQQSNLDRHERV-HTGVKPYSCK--ICWKAFAQTGNLTKH 480
SG C + C + F + L+ H++ H K +SC C K+F +L +H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH 59
Score = 42.9 bits (102), Expect = 9e-06
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTF 359
+L H ++H+ R + CE +
Sbjct: 55 HLKEHMKLHSDTRDYICEFSGPSS 78
Score = 36.8 bits (86), Expect = 0.001
Identities = 7/32 (21%), Positives = 11/32 (34%), Gaps = 2/32 (6%)
Query: 456 HTGVKPYSCKI--CWKAFAQTGNLTKHELSAH 485
+G C C + F+ L H+ H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH 33
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 100 bits (252), Expect = 3e-26
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 371 THTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSG 430
+ + P C C + + +A L H R+H +RP+ C C Q +NL KH + G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 431 ERPYHC 436
+
Sbjct: 63 DMSGPS 68
Score = 98.7 bits (247), Expect = 2e-25
Identities = 15/67 (22%), Positives = 28/67 (41%)
Query: 342 RIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 401
+ P +C C + + + L H + H ++P+ C C Q +NL KH++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 402 GERPYSC 408
G+
Sbjct: 62 GDMSGPS 68
Score = 98.0 bits (245), Expect = 3e-25
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 398 RVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHT 457
+ P C C + +A L H R+H +RP+ C YC+ Q SNL +H +
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 458 GVKPYSC 464
G
Sbjct: 62 GDMSGPS 68
Score = 93.7 bits (234), Expect = 8e-24
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 19/85 (22%)
Query: 119 THTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVC 178
+ + P C C + + +A L HERIH +RPF+C C
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAAL-------------------RIHERIHCTDRPFKCNYC 43
Query: 179 MKTFTQQPNLWKHMKTHTGEKPYNC 203
Q NL KHMK G+
Sbjct: 44 SFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 92.2 bits (230), Expect = 3e-23
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 165 RIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ P +C C + + + L H + H ++P+ C C Q +NL KH++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Score = 86.8 bits (216), Expect = 2e-21
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 19/86 (22%)
Query: 90 RIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHP 149
+ P +C C + + + L H + H ++P+ C C Q +
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPS---------- 51
Query: 150 TAVRDLFLVNLGTHERIHTGERPFRC 175
NL H + G+
Sbjct: 52 ---------NLSKHMKKFHGDMSGPS 68
Score = 79.5 bits (197), Expect = 1e-18
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 426 RLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
S P C C+ + ++ L HER+H +P+ C C Q NL+KH
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56
Score = 68.3 bits (168), Expect = 9e-15
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
L HERIH +RPF+C C Q NL KHMK G+
Sbjct: 24 ALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 66.8 bits (164), Expect = 2e-14
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
++ HERIH +RPF+C C Q NL KHMK G+
Sbjct: 21 SKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 41.7 bits (99), Expect = 2e-05
Identities = 6/28 (21%), Positives = 9/28 (32%)
Query: 454 RVHTGVKPYSCKICWKAFAQTGNLTKHE 481
+ P C C + + L HE
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHE 29
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 92.2 bits (230), Expect = 3e-23
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 341 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKT--HTGEKPYNCGMCDKAFTQRANLLKHIR 398
E GE +RC+VC + +T N +H T K Y C C K FT++ N+ H++
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Query: 399 VHTG 402
+
Sbjct: 62 IIHK 65
Score = 91.8 bits (229), Expect = 3e-23
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 398 RVHTGERPYSCKLCGKRFTQQANLVKHNR--LHSGERPYHCRYCTKTFIQQSNLDRHERV 455
GE Y CK+C + +T +N +H + Y C +C K F ++ N+ H ++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 456 HTGV 459
+
Sbjct: 63 IHKI 66
Score = 91.5 bits (228), Expect = 5e-23
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 164 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKT--HTGEKPYNCGMCDKAFTQRANLLKHIR 221
E GE +RC+VC + +T N +H T K Y C C K FT++ N+ H++
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Query: 222 VHTE 225
+ +
Sbjct: 62 IIHK 65
Score = 89.5 bits (223), Expect = 2e-22
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 371 THTGEKPYNCGMCDKAFTQRANLLKHIRV--HTGERPYSCKLCGKRFTQQANLVKHNRLH 428
T GE Y C +C + +T +N +H + Y C C K FT++ N+ H ++
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 429 SG 430
Sbjct: 64 HK 65
Score = 81.4 bits (202), Expect = 2e-19
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 21/83 (25%)
Query: 89 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKT--HTGEKPYNCGMCDKAFTQRANLWGSWV 146
E GE +RC+VC + +T N +H T K Y C C K FT++ N+
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMT---- 57
Query: 147 CHPTAVRDLFLVNLGTHERIHTG 169
H +I
Sbjct: 58 ---------------AHVKIIHK 65
Score = 81.4 bits (202), Expect = 2e-19
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 425 NRLHSGERPYHCRYCTKTFIQQSNLDRHERV--HTGVKPYSCKICWKAFAQTGNLTKHEL 482
GE Y C+ C++ + SN RH VK Y C C+K F + N+T H
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Query: 483 SAHGI 487
H I
Sbjct: 62 IIHKI 66
Score = 57.2 bits (139), Expect = 5e-11
Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 41/94 (43%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
+ CKVC++ +T S N H
Sbjct: 11 YRCKVCSRVYTHIS---------------------------------------NFCRHYV 31
Query: 343 I--HTGERPFRCEVCMKTFTQQPNLWKHMKTHTG 374
+ + C C K FT++ N+ H+K
Sbjct: 32 TSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 52.9 bits (128), Expect = 2e-09
Identities = 16/98 (16%), Positives = 28/98 (28%), Gaps = 43/98 (43%)
Query: 25 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSR 84
+ CKVC++ +T S R
Sbjct: 11 YRCKVCSRVYTHISN----------------------------------------FCRHY 30
Query: 85 RSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTG 122
++H + + C C K FT++ N+ H+K
Sbjct: 31 VTSH---KRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 48.3 bits (116), Expect = 9e-08
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 453 ERVHTGVKPYSCKICWKAFAQTGNLTKHELSAHGIG-KP 490
E G Y CK+C + + N +H +++H K
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV 40
Score = 35.2 bits (82), Expect = 0.004
Identities = 15/103 (14%), Positives = 22/103 (21%), Gaps = 52/103 (50%)
Query: 194 THTGEKPYNCGMCDKAFTQRANLLKHIRVHTENLKLYTRRKEEVEVEVDVCAGIYPLHQE 253
T GE Y C +C + +T N + H+
Sbjct: 4 TKEGEHTYRCKVCSRVYTHI-----------SNFCRHYVT----------------SHKR 36
Query: 254 GGVGLMGLPSHCCPGPIRKRKKKPRRDGTFVCKVCNKTFTQSS 296
K + C C K FT+
Sbjct: 37 N--------------------VKV-----YPCPFCFKEFTRKD 54
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 89.8 bits (223), Expect = 3e-22
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 344 HTGERPFRCEVCMKTFTQQPNLWKHMKTHT---GEKPYNCGMCDKAFTQRANLLKHIRV- 399
+G +CE+C T Q+ +L H + H + C C K F + ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 400 HTGERPYSCKLCGKRF 415
H + G
Sbjct: 62 HPALLLAPQESSGPSS 77
Score = 86.3 bits (214), Expect = 4e-21
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 167 HTGERPFRCEVCMKTFTQQPNLWKHMKTHT---GEKPYNCGMCDKAFTQRANLLKHIRVH 223
+G +CE+C T Q+ +L H + H + C C K F + ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 224 TENLKLYTRRK 234
L L +
Sbjct: 62 HPALLLAPQES 72
Score = 83.6 bits (207), Expect = 4e-20
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 400 HTGERPYSCKLCGKRFTQQANLVKHNRLHS---GERPYHCRYCTKTFIQQSNLDRHERVH 456
+G C++CG Q+A+L H R H+ + C +C K F + ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 457 TGVKPYSCK 465
+ +
Sbjct: 62 HPALLLAPQ 70
Score = 77.8 bits (192), Expect = 4e-18
Identities = 16/92 (17%), Positives = 24/92 (26%), Gaps = 22/92 (23%)
Query: 120 HTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHT---GERPFRCE 176
+G C +C Q+A+L H+R H F CE
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLN-------------------WHQRKHAETVAALRFPCE 42
Query: 177 VCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDK 208
C K F + ++ H
Sbjct: 43 FCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 77.8 bits (192), Expect = 5e-18
Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 22/92 (23%)
Query: 92 HTGERPFRCEVCMKTFTQQPNLWKHMKTHT---GEKPYNCGMCDKAFTQRANLWGSWVCH 148
+G +CE+C T Q+ +L H + H + C C K F +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPD--------- 52
Query: 149 PTAVRDLFLVNLGTHERIHTGERPFRCEVCMK 180
++ H +
Sbjct: 53 ----------SVAAHRSKSHPALLLAPQESSG 74
Score = 74.7 bits (184), Expect = 5e-17
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 428 HSGERPYHCRYCTKTFIQQSNLDRHERVHT---GVKPYSCKICWKAFAQTGNLTKHELSA 484
SG C C T Q+++L+ H+R H + C+ C K F + ++ H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 485 HGIGKPG 491
H
Sbjct: 62 HPALLLA 68
Score = 57.8 bits (140), Expect = 4e-11
Identities = 15/106 (14%), Positives = 23/106 (21%), Gaps = 42/106 (39%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
C++C T Q + +L H+R
Sbjct: 8 LQCEICGFTCRQKA---------------------------------------SLNWHQR 28
Query: 343 IHT---GERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDK 385
H F CE C K F + ++ H
Sbjct: 29 KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 53.9 bits (130), Expect = 1e-09
Identities = 10/51 (19%), Positives = 15/51 (29%), Gaps = 3/51 (5%)
Query: 86 STHERIHT---GERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDK 133
+ H+R H F CE C K F + ++ H
Sbjct: 24 NWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 47.8 bits (114), Expect = 2e-07
Identities = 15/102 (14%), Positives = 21/102 (20%), Gaps = 51/102 (50%)
Query: 195 HTGEKPYNCGMCDKAFTQRANLLKHIRVHTENLKLYTRRKEEVEVEVDVCAGIYPLHQEG 254
+G C +C Q+A+L H R H E
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAET------------------VAALR----- 38
Query: 255 GVGLMGLPSHCCPGPIRKRKKKPRRDGTFVCKVCNKTFTQSS 296
F C+ C K F +
Sbjct: 39 ----------------------------FPCEFCGKRFEKPD 52
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 84.5 bits (210), Expect = 1e-20
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 348 RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHI-RVHTGE 403
R F CEVC + F +Q +L +H ++HT EKPY CG+C++AFT+R L++H ++H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 83.3 bits (207), Expect = 3e-20
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHN-RLHSGE 431
+ + C +C +AF ++ +L +H R HT E+PY C LC + FT++ L++H ++HSG
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 79.8 bits (198), Expect = 6e-19
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 171 RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHI-RVHT 224
R F CEVC + F +Q +L +H ++HT EKPY CG+C++AFT+R L++H ++H+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 77.9 bits (193), Expect = 3e-18
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 404 RPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHE-RVHTG 458
R + C++C + F +Q +L +H R H+ E+PY C C + F ++ L RH ++H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 76.0 bits (188), Expect = 1e-17
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 432 RPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
R + C CT+ F +Q +L RH R HT KPY C +C +AF + L +H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50
Score = 74.8 bits (185), Expect = 3e-17
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 18/75 (24%)
Query: 96 RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDL 155
R F CEVC + F +Q +L +H ++HT EKPY CG+C++AFT+R L + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLL----IRH------- 49
Query: 156 FLVNLGTHERIHTGE 170
++IH+G
Sbjct: 50 -------AQKIHSGN 57
Score = 69.4 bits (171), Expect = 3e-15
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 20/77 (25%)
Query: 124 KPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFT 183
+ + C +C +AF ++ +L H R HT E+P+ C +C + FT
Sbjct: 1 RSFVCEVCTRAFARQEHLK-------------------RHYRSHTNEKPYPCGLCNRAFT 41
Query: 184 QQPNLWKHM-KTHTGEK 199
++ L +H K H+G
Sbjct: 42 RRDLLIRHAQKIHSGNL 58
Score = 60.2 bits (147), Expect = 5e-12
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 40/95 (42%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
FVC+VC + F + +L H R
Sbjct: 3 FVCEVCTRAFARQE---------------------------------------HLKRHYR 23
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTGEK 376
HT E+P+ C +C + FT++ L +H K H+G
Sbjct: 24 SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 56.7 bits (138), Expect = 8e-11
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 83 SRRS---THERIHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTGEK 124
+R+ H R HT E+P+ C +C + FT++ L +H K H+G
Sbjct: 13 ARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 82.3 bits (204), Expect = 2e-19
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Query: 407 SCKLCGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTFIQQSNLDRHERVHTGVKPYSC 464
+ CGK F + L H H+ + PY C + C K F S L RHE+VH G
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64
Query: 465 KICWKAFAQTGNLTKHELSAH 485
C KH H
Sbjct: 65 DSCSFVGKTWTLYLKHVAECH 85
Score = 81.5 bits (202), Expect = 3e-19
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 352 CEVCMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDKAFTQRANLLKHIRVHTGERPYSCK 409
E C K F + L H +HT + PY C CDK F+ + L +H +VH G
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65
Query: 410 LCGKRFTQQANLVKHNR 426
C +KH
Sbjct: 66 SCSFVGKTWTLYLKHVA 82
Score = 74.6 bits (184), Expect = 7e-17
Identities = 23/97 (23%), Positives = 31/97 (31%), Gaps = 21/97 (21%)
Query: 127 NCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC--EVCMKTFTQ 184
+ C KAF + L H+ HT + P+ C E C K F+
Sbjct: 5 HFENCGKAFKKHNQL-------------------KVHQFSHTQQLPYECPHEGCDKRFSL 45
Query: 185 QPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIR 221
L +H K H G C LKH+
Sbjct: 46 PSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82
Score = 73.8 bits (182), Expect = 1e-16
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 336 NLGTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 393
L H+ HT + P+ C E C K F+ L +H K H G C
Sbjct: 18 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 77
Query: 394 LKHIR 398
LKH+
Sbjct: 78 LKHVA 82
Score = 73.4 bits (181), Expect = 2e-16
Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 22/99 (22%)
Query: 100 CEVCMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDKAFTQRANLWGSWVCHPTAVRDLFL 157
E C K F + L H +HT + PY C CDK F+ +
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPS------------------ 47
Query: 158 VNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK-TH 195
L HE++H G + + C KH+ H
Sbjct: 48 -RLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 66.1 bits (162), Expect = 7e-14
Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 82 RSRRSTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRA 139
++ H+ HT + P+ C E C K F+ L +H K H G C
Sbjct: 16 HNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWT 75
Query: 140 NL 141
Sbjct: 76 LY 77
Score = 59.6 bits (145), Expect = 1e-11
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 175 CEVCMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDKAFTQRANLLKHIRVHT 224
E C K F + L H +HT + PY C CDK F+ + L +H +VH
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 57
Score = 43.0 bits (102), Expect = 1e-05
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK-TH 372
L HE++H G + + C KH+ H
Sbjct: 48 RLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 41.8 bits (99), Expect = 2e-05
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 83 SRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK-TH 120
SR HE++H G + + C KH+ H
Sbjct: 47 SRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 29.1 bits (66), Expect = 0.77
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 202 NCGMCDKAFTQRANLLKHIRVHT 224
+ C KAF + L H HT
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHT 27
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 77.9 bits (191), Expect = 1e-17
Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 7/106 (6%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK-----THTGEKPYNCGMCDKAFTQR 390
+ + I TG FRC+ C + L HM + N + ++
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 391 ANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKH--NRLHSGERPY 434
+LL+ ++ C CG F +L H H +
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 73.3 bits (179), Expect = 6e-16
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 5/98 (5%)
Query: 388 TQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRL-----HSGERPYHCRYCTKT 442
+ ++ + + TG + CK C + L H + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 443 FIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
++ +L E K C C +F +L+ H
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 72.9 bits (178), Expect = 8e-16
Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%)
Query: 360 TQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRV-----HTGERPYSCKLCGKR 414
+ + + TG + C C A+ L H+ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 415 FTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRH 452
++ +L++ ++ C YC +F +L H
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 70.9 bits (173), Expect = 3e-15
Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 16/117 (13%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVC 147
+ I TG FRC+ C + L HM TG + D +R W
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKR---WSK--- 62
Query: 148 HPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK--THTGEKPYN 202
+L E ++ +C C +F +L HM H +
Sbjct: 63 -------PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
Score = 65.2 bits (158), Expect = 3e-13
Identities = 16/119 (13%), Positives = 30/119 (25%), Gaps = 24/119 (20%)
Query: 108 TQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERI- 166
+ + + TG + C C A+ LV L H
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDT-------------------LVELTVHMNET 42
Query: 167 ----HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIR 221
+ ++ +L + +K C C +F +L H+
Sbjct: 43 GHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 54.0 bits (129), Expect = 3e-09
Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Query: 159 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK-----THTGEKPYNCGMCDKAFTQR 213
+ + I TG FRC+ C + L HM + N + ++
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 214 ANLLKHIRVHT 224
+LL+
Sbjct: 66 RSLLEMEGKED 76
Score = 44.4 bits (104), Expect = 6e-06
Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 8/99 (8%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
F CK C+ + LT + + N W P +L E
Sbjct: 20 FRCKDCSAAYDTLV----ELTVHMNETGHYRDDNHETDNNNPKRW--SKPRKRSLLEMEG 73
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHMK--THTGEKPYN 379
++ +C C +F +L HM H +
Sbjct: 74 KEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
Score = 43.2 bits (101), Expect = 2e-05
Identities = 7/57 (12%), Positives = 15/57 (26%)
Query: 85 RSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 141
T + ++ +L + +K C C +F +L
Sbjct: 40 NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDL 96
Score = 40.9 bits (95), Expect = 1e-04
Identities = 16/105 (15%), Positives = 28/105 (26%), Gaps = 14/105 (13%)
Query: 25 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSR 84
F CK C+ + LT + + N W + +
Sbjct: 20 FRCKDCSAAYDTLV----ELTVHMNETGHYRDDNHETDNNNPKRWSKP--------RKRS 67
Query: 85 RSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK--THTGEKPYN 127
E ++ +C C +F +L HM H +
Sbjct: 68 LLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 75.3 bits (186), Expect = 2e-17
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHI-RVHTGERPYSCKLCGKRFTQ 417
+ + KPY C C K F++ +L HI +VHT ERP+ C++ +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 72.2 bits (178), Expect = 2e-16
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK-THTGEKPYNCGMCDKAFTQ 212
G+ + +P+ C+ C K F++ +L H+K HT E+P+ C + +
Sbjct: 1 GSSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 72.2 bits (178), Expect = 2e-16
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMK-THTGEKPYNCGMCDKAFTQ 389
G+ + +P+ C+ C K F++ +L H+K HT E+P+ C + +
Sbjct: 1 GSSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 69.9 bits (172), Expect = 1e-15
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMK-THTGEKPYNCGMCDKAFTQ 137
+ + +P+ C+ C K F++ +L H+K HT E+P+ C + +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 68.8 bits (169), Expect = 4e-15
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHE-RVHTGVKPYSCKICWKAFAQ 473
S +PY C+ C K F + +L+ H +VHT +P+ C++ +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 65.7 bits (161), Expect = 4e-14
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHN-RLHSGERPYHCRYCTKTF 443
+ +PY C+ CGK F++ +L H ++H+ ERP+ C+
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 62.6 bits (153), Expect = 5e-13
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 18/69 (26%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ + KPY C C K F++ +L H +++HT ERP +C
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHL----NGHI--------------KQVHTSERPHKC 44
Query: 176 EVCMKTFTQ 184
+V + +
Sbjct: 45 QVWVSGPSS 53
Score = 48.3 bits (116), Expect = 6e-08
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHI-RVHT 224
+ + KPY C C K F++ +L HI +VHT
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT 37
Score = 41.0 bits (97), Expect = 2e-05
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHELSAH 485
+ KPY C+ C K F++ +L H H
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36
Score = 39.9 bits (94), Expect = 6e-05
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 40/80 (50%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHE- 341
++C+ C K F++ +L H
Sbjct: 13 YICQSCGKGFSRPD---------------------------------------HLNGHIK 33
Query: 342 RIHTGERPFRCEVCMKTFTQ 361
++HT ERP +C+V + +
Sbjct: 34 QVHTSERPHKCQVWVSGPSS 53
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 46/86 (53%)
Query: 25 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSR 84
++C+ C K F++ +L
Sbjct: 13 YICQSCGKGFSRPD-------------HLN------------------------------ 29
Query: 85 RSTHE-RIHTGERPFRCEVCMKTFTQ 109
H ++HT ERP +C+V + +
Sbjct: 30 --GHIKQVHTSERPHKCQVWVSGPSS 53
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 74.6 bits (184), Expect = 6e-17
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 159 NLGTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 216
NL + RP+ C E C + F++ L +H++ HTG+KP+ C +C + F++ +L
Sbjct: 8 NLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65
Query: 217 LKHIRVHT 224
HIR HT
Sbjct: 66 TTHIRTHT 73
Score = 74.6 bits (184), Expect = 6e-17
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 336 NLGTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 393
NL + RP+ C E C + F++ L +H++ HTG+KP+ C +C + F++ +L
Sbjct: 8 NLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65
Query: 394 LKHIRVHT 401
HIR HT
Sbjct: 66 TTHIRTHT 73
Score = 72.7 bits (179), Expect = 2e-16
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 362 QPNLWKHMKTH--TGEKPYNCGM--CDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQ 417
+P+ ++ + +PY C + CD+ F++ L +HIR+HTG++P+ C++C + F++
Sbjct: 2 EPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR 61
Query: 418 QANLVKHNRLHS 429
+L H R H+
Sbjct: 62 SDHLTTHIRTHT 73
Score = 70.0 bits (172), Expect = 2e-15
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 398 RVHTGERPYSCKL--CGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERV 455
V RPY+C + C +RF++ L +H R+H+G++P+ CR C + F + +L H R
Sbjct: 12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71
Query: 456 HT 457
HT
Sbjct: 72 HT 73
Score = 66.6 bits (163), Expect = 4e-14
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 424 HNRLHSGERPYHCRY--CTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
N + RPY C C + F + L RH R+HTG KP+ C+IC + F+++ +LT H
Sbjct: 10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68
Score = 63.5 bits (155), Expect = 4e-13
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 22/92 (23%)
Query: 80 LERSRRST-HERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFT 136
+E + + RP+ C E C + F++ L +H++ HTG+KP+ C +C + F+
Sbjct: 1 MEPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 137 QRANLWGSWVCHPTAVRDLFLVNLGTHERIHT 168
+ +L TH R HT
Sbjct: 61 R-------------------SDHLTTHIRTHT 73
Score = 30.4 bits (69), Expect = 0.20
Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 446 QSNLDRHERVHTGVKPYSCKI--CWKAFAQTGNLTKH 480
+NL + ++PY+C + C + F+++ LT+H
Sbjct: 6 MNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRH 40
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 73.3 bits (181), Expect = 6e-17
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYS 407
+ GEKPY C C F Q A+L H+ +HTG P S
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 68.7 bits (169), Expect = 3e-15
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYN 127
GE+P++CE C F Q +L H+ HTG P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 68.7 bits (169), Expect = 3e-15
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 163 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYN 202
GE+P++CE C F Q +L H+ HTG P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 68.7 bits (169), Expect = 3e-15
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 340 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYN 379
GE+P++CE C F Q +L H+ HTG P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPY 434
GE+PY C+ CG RF Q A+L H +H+G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 62.9 bits (154), Expect = 3e-13
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYS 463
+ GE+PY C C F+Q ++L H +HTG P S
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 60.6 bits (148), Expect = 2e-12
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GEKPY C C F Q A+L H+ +HT
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT 35
Score = 59.5 bits (145), Expect = 5e-12
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 19/58 (32%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
+ GEKPY C C F Q A+L H IHTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLR-------------------AHVLIHTGSGPS 40
Score = 46.0 bits (110), Expect = 3e-07
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
G KPY C+ C F Q +L H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAH 30
Score = 30.2 bits (69), Expect = 0.13
Identities = 11/66 (16%), Positives = 14/66 (21%), Gaps = 39/66 (59%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
C+ C F Q + +L H IH
Sbjct: 14 CETCGARFVQVA---------------------------------------HLRAHVLIH 34
Query: 345 TGERPF 350
TG P
Sbjct: 35 TGSGPS 40
Score = 27.5 bits (62), Expect = 1.1
Identities = 6/12 (50%), Positives = 6/12 (50%)
Query: 87 THERIHTGERPF 98
H IHTG P
Sbjct: 29 AHVLIHTGSGPS 40
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 73.3 bits (181), Expect = 7e-17
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K + + NL H +VHTGERP
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 70.3 bits (173), Expect = 1e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++CE C K + + NL H K HTGE+P
Sbjct: 1 GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 70.3 bits (173), Expect = 1e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++CE C K + + NL H K HTGE+P
Sbjct: 1 GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C+ CGK + + NL H ++H+GERP
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++CE C K + + NL H K HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K + + NLD H++VHTG +P
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 62.2 bits (152), Expect = 7e-13
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C K + + NL H+++HTGERP
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKF-------------------NLDMHQKVHTGERPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 58.7 bits (143), Expect = 1e-11
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K + + NL H +VHT
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT 36
Score = 47.1 bits (113), Expect = 1e-07
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C+ C K + NL H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31
Score = 33.7 bits (78), Expect = 0.007
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 336 NLGTHERIHTGERPFRC 352
NL H+++HTGERP
Sbjct: 27 NLDMHQKVHTGERPSGP 43
Score = 31.0 bits (71), Expect = 0.067
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+ H+++HTGERP
Sbjct: 25 KFNLDMHQKVHTGERPSGP 43
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 73.3 bits (181), Expect = 7e-17
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C KAFT+++ L H + HTGER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K FT++ L H ++HTGE+
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K FT++ L H ++HTGE+
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 67.5 bits (166), Expect = 7e-15
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK FT+++ L H + H+GER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K FT++ L H ++HTGE+
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 64.1 bits (157), Expect = 1e-13
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F ++S L H++ HTG +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 62.5 bits (153), Expect = 4e-13
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C KAFT+++ L H++ HTGER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKS-------------------GLHIHQQSHTGERHSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 58.3 bits (142), Expect = 1e-11
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAFT+++ L H + HT
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT 36
Score = 46.3 bits (111), Expect = 2e-07
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C KAF + L H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31
Score = 32.9 bits (76), Expect = 0.015
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 336 NLGTHERIHTGERPFRC 352
L H++ HTGER
Sbjct: 27 GLHIHQQSHTGERHSGP 43
Score = 31.3 bits (72), Expect = 0.056
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S H++ HTGER
Sbjct: 25 KSGLHIHQQSHTGERHSGP 43
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 72.9 bits (180), Expect = 1e-16
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C KAFT R+NL+KH ++HT ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 70.6 bits (174), Expect = 7e-16
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C C K FT + NL KH K HT +KP
Sbjct: 1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 70.6 bits (174), Expect = 7e-16
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C C K FT + NL KH K HT +KP
Sbjct: 1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK FT ++NL+KH ++H+ ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ C C K FT + NL KH K HT +KP
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 65.2 bits (160), Expect = 6e-14
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F +SNL +H+++HT KP
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 61.8 bits (151), Expect = 9e-13
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C C KAFT R+ NL H++IHT ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRS-------------------NLIKHQKIHTKQKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 58.7 bits (143), Expect = 1e-11
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAFT R+NL+KH ++HT
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT 36
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C KAF NL KH
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKH 31
Score = 33.3 bits (77), Expect = 0.012
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
NL H++IHT ++P
Sbjct: 27 NLIKHQKIHTKQKPSGPS 44
Score = 31.7 bits (73), Expect = 0.038
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
RS H++IHT ++P
Sbjct: 24 IRSNLIKHQKIHTKQKPSGPS 44
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 73.0 bits (180), Expect = 1e-16
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ GE+ + C C K F Q +N ++H R+HTGE+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
GER + C CGK F Q +N ++H R+H+GE+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ GER RC C K F Q N +H + HTGEKP
Sbjct: 1 GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ GER RC C K F Q N +H + HTGEKP
Sbjct: 1 GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ GER RC C K F Q N +H + HTGEKP
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 3e-14
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
GER + C C K F+Q SN +H R+HTG KP
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 61.0 bits (149), Expect = 2e-12
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ GE+ + C C K F Q + N H RIHTGE+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQAS-------------------NFIQHRRIHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 59.5 bits (145), Expect = 6e-12
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GE+ + C C K F Q +N ++H R+HT
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT 36
Score = 44.5 bits (106), Expect = 1e-06
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
G + + C C K F Q N +H
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQH 31
Score = 32.1 bits (74), Expect = 0.027
Identities = 15/70 (21%), Positives = 17/70 (24%), Gaps = 39/70 (55%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
C C K F Q+S N H R
Sbjct: 13 HRCSDCGKFFLQAS---------------------------------------NFIQHRR 33
Query: 343 IHTGERPFRC 352
IHTGE+P
Sbjct: 34 IHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.21
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 82 RSRRSTHERIHTGERPFRC 100
S H RIHTGE+P
Sbjct: 25 ASNFIQHRRIHTGEKPSGP 43
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 73.0 bits (180), Expect = 1e-16
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K+F +++ L H R+HTGE P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F +++ L H R+H+GE P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C C K+F ++ L H + HTGE P
Sbjct: 1 GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C C K+F ++ L H + HTGE P
Sbjct: 1 GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ C C K+F ++ L H + HTGE P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K+FI++S L H+R+HTG P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 61.4 bits (150), Expect = 1e-12
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C K+F +++ L H+RIHTGE P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKS-------------------QLHVHQRIHTGENPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 57.9 bits (141), Expect = 2e-11
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K+F +++ L H R+HT
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT 36
Score = 46.8 bits (112), Expect = 2e-07
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K+F + L H
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVH 31
Score = 32.5 bits (75), Expect = 0.020
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
L H+RIHTGE P
Sbjct: 27 QLHVHQRIHTGENPSGP 43
Score = 31.0 bits (71), Expect = 0.067
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S+ H+RIHTGE P
Sbjct: 25 KSQLHVHQRIHTGENPSGP 43
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 72.9 bits (180), Expect = 1e-16
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGE+PY C +C KAFT R+NL+KH ++HTGE+P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 71.4 bits (176), Expect = 3e-16
Identities = 23/43 (53%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGERP+ C VC K FT + NL KH K HTGEKP
Sbjct: 1 GSSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 71.4 bits (176), Expect = 3e-16
Identities = 23/43 (53%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGERP+ C VC K FT + NL KH K HTGEKP
Sbjct: 1 GSSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 69.8 bits (172), Expect = 1e-15
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGERPY C +CGK FT ++NL+KH ++H+GE+P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 69.4 bits (171), Expect = 2e-15
Identities = 22/42 (52%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGERP+ C VC K FT + NL KH K HTGEKP
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 65.2 bits (160), Expect = 5e-14
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GERPY C C K F +SNL +H+++HTG KP
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 61.0 bits (149), Expect = 2e-12
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGE+PY C +C KAFT R+ NL H++IHTGE+P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRS-------------------NLIKHQKIHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 1e-11
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGE+PY C +C KAFT R+NL+KH ++HT
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT 36
Score = 48.3 bits (116), Expect = 6e-08
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG +PY C +C KAF NL KH
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKH 31
Score = 32.8 bits (76), Expect = 0.016
Identities = 16/70 (22%), Positives = 21/70 (30%), Gaps = 39/70 (55%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
++C VC K FT S NL H++
Sbjct: 13 YICTVCGKAFTDRS---------------------------------------NLIKHQK 33
Query: 343 IHTGERPFRC 352
IHTGE+P
Sbjct: 34 IHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.065
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 81 ERSRRSTHERIHTGERPFRC 100
+RS H++IHTGE+P
Sbjct: 24 DRSNLIKHQKIHTGEKPSGP 43
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 72.5 bits (179), Expect = 1e-16
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C KAFT R+NL H ++HTGE+P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 70.2 bits (173), Expect = 1e-15
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+RC C K FT + NL+ H K HTGEKP
Sbjct: 1 GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 70.2 bits (173), Expect = 1e-15
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+RC C K FT + NL+ H K HTGEKP
Sbjct: 1 GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+RC C K FT + NL+ H K HTGEKP
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK FT ++NL H ++H+GE+P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 64.5 bits (158), Expect = 8e-14
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F +SNL H+++HTG KP
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 62.5 bits (153), Expect = 4e-13
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C C KAFT R+ NL TH++IHTGE+P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRS-------------------NLFTHQKIHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 58.7 bits (143), Expect = 1e-11
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAFT R+NL H ++HT
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT 36
Score = 46.7 bits (112), Expect = 2e-07
Identities = 13/30 (43%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C KAF NL H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTH 31
Score = 34.0 bits (79), Expect = 0.006
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 336 NLGTHERIHTGERPFRCE 353
NL TH++IHTGE+P
Sbjct: 27 NLFTHQKIHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.014
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
+RS TH++IHTGE+P
Sbjct: 24 DRSNLFTHQKIHTGEKPSGPS 44
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 72.5 bits (179), Expect = 1e-16
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGE P+ C C K FT + NL+ H ++HTGERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 70.6 bits (174), Expect = 6e-16
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE PF C C K FT + NL H K HTGE+P
Sbjct: 1 GSSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 70.6 bits (174), Expect = 6e-16
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE PF C C K FT + NL H K HTGE+P
Sbjct: 1 GSSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 68.7 bits (169), Expect = 4e-15
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE PF C C K FT + NL H K HTGE+P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 67.9 bits (167), Expect = 5e-15
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE P+ C CGK FT + NL+ H ++H+GERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 64.8 bits (159), Expect = 6e-14
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE P+ C C K F ++NL H+++HTG +P
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 61.4 bits (150), Expect = 1e-12
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGE P+ C C K FT + NL H++IHTGERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKT-------------------NLIIHQKIHTGERPSGP 43
Score = 57.5 bits (140), Expect = 3e-11
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGE P+ C C K FT + NL+ H ++HT
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT 36
Score = 45.2 bits (108), Expect = 6e-07
Identities = 10/29 (34%), Positives = 11/29 (37%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG P+ C C K F NL H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIH 31
Score = 33.6 bits (78), Expect = 0.008
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 336 NLGTHERIHTGERPFRC 352
NL H++IHTGERP
Sbjct: 27 NLIIHQKIHTGERPSGP 43
Score = 31.3 bits (72), Expect = 0.045
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 82 RSRRSTHERIHTGERPFRC 100
++ H++IHTGERP
Sbjct: 25 KTNLIIHQKIHTGERPSGP 43
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 72.6 bits (179), Expect = 1e-16
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCK 409
+ TGEKPY C +C KAFTQ+A+L +H + HTGE+P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 69.9 bits (172), Expect = 1e-15
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C+VC K FTQ+ +L +H KTHTGEKP
Sbjct: 1 GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 69.9 bits (172), Expect = 1e-15
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C+VC K FTQ+ +L +H KTHTGEKP
Sbjct: 1 GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY CK+C K FTQ+A+L +H + H+GE+P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ C+VC K FTQ+ +L +H KTHTGEKP
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCK 465
+GE+PY C+ C+K F Q+++L +H++ HTG KP
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 61.0 bits (149), Expect = 1e-12
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C +C KAFTQ+A +L H++ HTGE+P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKA-------------------HLAQHQKTHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 57.9 bits (141), Expect = 2e-11
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C +C KAFTQ+A+L +H + HT
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT 36
Score = 48.7 bits (117), Expect = 3e-08
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY CK+C KAF Q +L +H
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQH 31
Score = 32.5 bits (75), Expect = 0.018
Identities = 15/69 (21%), Positives = 21/69 (30%), Gaps = 39/69 (56%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
CKVC+K FTQ + +L H++ H
Sbjct: 15 CKVCSKAFTQKA---------------------------------------HLAQHQKTH 35
Query: 345 TGERPFRCE 353
TGE+P
Sbjct: 36 TGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.084
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
++ + H++ HTGE+P
Sbjct: 25 KAHLAQHQKTHTGEKPSGPS 44
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 72.2 bits (178), Expect = 2e-16
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCK 409
+ TGEKPY C +C K+FT+++ L H ++HTGE+P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 68.3 bits (168), Expect = 4e-15
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C +CGK FT+++ L H ++H+GE+P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 5e-15
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C +C K+FT++ L H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 5e-15
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C +C K+FT++ L H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ C +C K+FT++ L H + HTGEKP
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 64.5 bits (158), Expect = 9e-14
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCK 465
+GE+PY C C K+F ++S L H+++HTG KP
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 61.8 bits (151), Expect = 8e-13
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C +C K+FT+++ L H++IHTGE+P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKS-------------------QLHVHQQIHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 57.5 bits (140), Expect = 3e-11
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C +C K+FT+++ L H ++HT
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT 36
Score = 49.5 bits (119), Expect = 2e-08
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C IC K+F + L H
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVH 31
Score = 33.7 bits (78), Expect = 0.008
Identities = 14/68 (20%), Positives = 20/68 (29%), Gaps = 39/68 (57%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
C +C K+FT+ S L H++IH
Sbjct: 15 CSICGKSFTKKS---------------------------------------QLHVHQQIH 35
Query: 345 TGERPFRC 352
TGE+P
Sbjct: 36 TGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.045
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S+ H++IHTGE+P
Sbjct: 25 KSQLHVHQQIHTGEKPSGP 43
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 72.1 bits (178), Expect = 2e-16
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYS 407
+ GEKPY C +C F L H+R+HTG P S
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 68.3 bits (168), Expect = 3e-15
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 126
GE+P+ CE+C F L H++ HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 68.3 bits (168), Expect = 3e-15
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 163 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 201
GE+P+ CE+C F L H++ HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 68.3 bits (168), Expect = 3e-15
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 340 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 378
GE+P+ CE+C F L H++ HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 66.0 bits (162), Expect = 3e-14
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPY 434
GE+PY C++CG RF L H R+H+G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 62.1 bits (152), Expect = 5e-13
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYS 463
+ GE+PY C C F L H R+HTG P S
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 58.7 bits (143), Expect = 1e-11
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GEKPY C +C F L H+R+HT
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT 35
Score = 58.3 bits (142), Expect = 1e-11
Identities = 16/58 (27%), Positives = 19/58 (32%), Gaps = 19/58 (32%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
+ GEKPY C +C F L +H RIHTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLK-------------------SHLRIHTGSGPS 40
Score = 45.6 bits (109), Expect = 4e-07
Identities = 10/29 (34%), Positives = 11/29 (37%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
G KPY C+IC F L H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30
Score = 30.9 bits (71), Expect = 0.075
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 336 NLGTHERIHTGERPF 350
L +H RIHTG P
Sbjct: 26 TLKSHLRIHTGSGPS 40
Score = 28.2 bits (64), Expect = 0.51
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 87 THERIHTGERPF 98
+H RIHTG P
Sbjct: 29 SHLRIHTGSGPS 40
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 72.2 bits (178), Expect = 2e-16
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP+ C C K F++R+ L H ++HTGE+P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+PF+C C K F+++ L H K HTGEKP
Sbjct: 1 GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+PF+C C K F+++ L H K HTGEKP
Sbjct: 1 GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 9e-15
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+PF+C C K F+++ L H K HTGEKP
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P+ C CGK F++++ L H++LH+GE+P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 64.5 bits (158), Expect = 1e-13
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P+ C C K F ++S L+ H ++HTG KP
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 61.8 bits (151), Expect = 8e-13
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKP+ C C K F++R+ L H ++HTGE+P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALN-------------------VHHKLHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 57.9 bits (141), Expect = 2e-11
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKP+ C C K F++R+ L H ++HT
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT 36
Score = 45.6 bits (109), Expect = 5e-07
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KP+ C C K F++ L H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVH 31
Score = 32.5 bits (75), Expect = 0.018
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
L H ++HTGE+P
Sbjct: 27 ALNVHHKLHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.040
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 82 RSRRSTHERIHTGERPFRC 100
RS + H ++HTGE+P
Sbjct: 25 RSALNVHHKLHTGEKPSGP 43
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 72.2 bits (178), Expect = 2e-16
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C +C KAF+ R +L H R+H+G++P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C +CGK F+ + +L H R+HSG++P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C VC K F+ + +L H + H+G+KP
Sbjct: 1 GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C VC K F+ + +L H + H+G+KP
Sbjct: 1 GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
TGE+P+ C VC K F+ + +L H + H+G+KP
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F + +L H+R+H+G KP
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 61.0 bits (149), Expect = 2e-12
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C +C KAF+ R +L H+RIH+G++P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQ-------------------SLSVHQRIHSGKKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 57.5 bits (140), Expect = 2e-11
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C +C KAF+ R +L H R+H+
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36
Score = 48.3 bits (116), Expect = 4e-08
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C +C KAF+ +L+ H
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVH 31
Score = 32.5 bits (75), Expect = 0.019
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H+RIH+G++P
Sbjct: 27 SLSVHQRIHSGKKPSGPS 44
Score = 31.3 bits (72), Expect = 0.045
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
R S H+RIH+G++P
Sbjct: 25 RQSLSVHQRIHSGKKPSGPS 44
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 72.2 bits (178), Expect = 2e-16
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY CG C KAF Q+ANL +H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+RC C K F Q+ NL +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+RC C K F Q+ NL +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F Q+ANL +H R+H+GE+P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 7e-15
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+RC C K F Q+ NL +H + HTGEKP
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F Q++NL +H+R+HTG KP
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 61.4 bits (150), Expect = 1e-12
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY CG C KAF Q+A NL H+RIHTGE+P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKA-------------------NLTQHQRIHTGEKPSGP 43
Score = 57.5 bits (140), Expect = 2e-11
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY CG C KAF Q+ANL +H R+HT
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT 36
Score = 47.9 bits (115), Expect = 7e-08
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C KAFAQ NLT+H
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQH 31
Score = 33.2 bits (77), Expect = 0.012
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 336 NLGTHERIHTGERPFRC 352
NL H+RIHTGE+P
Sbjct: 27 NLTQHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.033
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 82 RSRRSTHERIHTGERPFRC 100
++ + H+RIHTGE+P
Sbjct: 25 KANLTQHQRIHTGEKPSGP 43
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 72.2 bits (178), Expect = 2e-16
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEKPY C C K + +R +L H RVHTGE+
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+P++C C K + ++ +L H + HTGEK
Sbjct: 1 GSSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+P++C C K + ++ +L H + HTGEK
Sbjct: 1 GSSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+PY C CGK + ++ +L H R+H+GE+
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GE+P++C C K + ++ +L H + HTGEK
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 65.6 bits (161), Expect = 3e-14
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+PY C C K + ++ +LD H+RVHTG K
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 61.0 bits (149), Expect = 1e-12
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ +GEKPY C C K + +R +L H+R+HTGE+
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLD-------------------FHQRVHTGEKLSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 57.9 bits (141), Expect = 2e-11
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKPY C C K + +R +L H RVHT
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT 36
Score = 44.8 bits (107), Expect = 8e-07
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KPY C C K + + +L H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31
Score = 32.1 bits (74), Expect = 0.028
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H+R+HTGE+
Sbjct: 27 DLDFHQRVHTGEKLSGP 43
Score = 31.3 bits (72), Expect = 0.055
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 82 RSRRSTHERIHTGERPFRC 100
R H+R+HTGE+
Sbjct: 25 RLDLDFHQRVHTGEKLSGP 43
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 71.8 bits (177), Expect = 2e-16
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ G PY C C+K+F+ + LL H R+HT E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ G P++C C K+F+ + L H + HT EKP
Sbjct: 1 GSSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ G P++C C K+F+ + L H + HT EKP
Sbjct: 1 GSSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 64.1 bits (157), Expect = 1e-13
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
G PY C C K F+ + L+ H R+H+ E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 64.1 bits (157), Expect = 1e-13
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ G P++C C K+F+ + L H + HT EKP
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 62.9 bits (154), Expect = 4e-13
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+G PY C C K+F + L H+R+HT KP
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 61.4 bits (150), Expect = 1e-12
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ G PY C C+K+F+ + L H+R+HT E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKL-------------------RLLVHQRMHTREKPSGP 43
Score = 57.9 bits (141), Expect = 2e-11
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ G PY C C+K+F+ + LL H R+HT
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT 36
Score = 42.9 bits (102), Expect = 4e-06
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
GV PY C C K+F+ L H+
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ 32
Score = 33.3 bits (77), Expect = 0.011
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
L H+R+HT E+P
Sbjct: 27 RLLVHQRMHTREKPSGP 43
Score = 32.5 bits (75), Expect = 0.021
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+ R H+R+HT E+P
Sbjct: 25 KLRLLVHQRMHTREKPSGP 43
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.8 bits (177), Expect = 2e-16
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCK 409
+ TGEKPY+C +C KAF A+L +H+RVHT E
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 69.1 bits (170), Expect = 2e-15
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C VC K F +L +H++ HT E
Sbjct: 1 GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C VC K F +L +H++ HT E
Sbjct: 1 GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
TGE+P+ C VC K F +L +H++ HT E
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 67.5 bits (166), Expect = 7e-15
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PYSC +CGK F A+L +H R+H+ E
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCK 465
+GE+PY C C K F+ ++L++H RVHT
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 61.8 bits (151), Expect = 1e-12
Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY+C +C KAF A +L H R+HT E
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSA-------------------HLNQHLRVHTQETLSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 57.9 bits (141), Expect = 2e-11
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY+C +C KAF A+L +H+RVHT
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT 36
Score = 46.7 bits (112), Expect = 2e-07
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPYSC +C KAF + +L +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQH 31
Score = 32.5 bits (75), Expect = 0.018
Identities = 12/71 (16%), Positives = 16/71 (22%), Gaps = 39/71 (54%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
+ C VC K F S+ +L H R
Sbjct: 13 YSCNVCGKAFVLSA---------------------------------------HLNQHLR 33
Query: 343 IHTGERPFRCE 353
+HT E
Sbjct: 34 VHTQETLSGPS 44
Score = 30.9 bits (71), Expect = 0.064
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
+ + H R+HT E
Sbjct: 25 SAHLNQHLRVHTQETLSGPS 44
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 71.8 bits (177), Expect = 3e-16
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCK 409
+ TGEKPYNC C K+F + LLKH RVH+GE+P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 69.5 bits (171), Expect = 2e-15
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY+CK CGK F + L+KH R+HSGE+P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 68.0 bits (167), Expect = 5e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C+ C K+F L KH + H+GEKP
Sbjct: 1 GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 68.0 bits (167), Expect = 5e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C+ C K+F L KH + H+GEKP
Sbjct: 1 GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ C+ C K+F L KH + H+GEKP
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 65.7 bits (161), Expect = 3e-14
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCK 465
+GE+PY+C+ C K+F S L +H+RVH+G KP
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 58.4 bits (142), Expect = 1e-11
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPYNC C K+F + L H+R+H+GE+P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWAS-------------------CLLKHQRVHSGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 56.0 bits (136), Expect = 9e-11
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPYNC C K+F + LLKH RVH+
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS 36
Score = 48.3 bits (116), Expect = 5e-08
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY+CK C K+F L KH
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKH 31
Score = 32.5 bits (75), Expect = 0.020
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H+R+H+GE+P
Sbjct: 27 CLLKHQRVHSGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.083
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S H+R+H+GE+P
Sbjct: 25 ASCLLKHQRVHSGEKPSGPS 44
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.7 bits (177), Expect = 3e-16
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP+ C C KAF ++NL+ H R HTGE+P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 69.8 bits (172), Expect = 1e-15
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+PF C C K F + NL H +THTGEKP
Sbjct: 1 GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 69.8 bits (172), Expect = 1e-15
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+PF C C K F + NL H +THTGEKP
Sbjct: 1 GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+PF C C K F + NL H +THTGEKP
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P+ C C K F ++NL+ H R H+GE+P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 64.4 bits (158), Expect = 9e-14
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P+ C C K F +SNL H+R HTG KP
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKP+ C C KAF ++ NL H+R HTGE+P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKS-------------------NLIVHQRTHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 56.7 bits (138), Expect = 5e-11
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKP+ C C KAF ++NL+ H R HT
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT 36
Score = 49.0 bits (118), Expect = 3e-08
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KP+ C C KAF NL H
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVH 31
Score = 33.2 bits (77), Expect = 0.013
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
NL H+R HTGE+P
Sbjct: 27 NLIVHQRTHTGEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.081
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
+S H+R HTGE+P
Sbjct: 25 KSNLIVHQRTHTGEKPSGPS 44
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 71.8 bits (177), Expect = 3e-16
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ GEK + C CD F+Q ++L H VH GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ GE+ ++C C F+Q +L H H GEKP
Sbjct: 1 GSSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ GE+ ++C C F+Q +L H H GEKP
Sbjct: 1 GSSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 64.1 bits (157), Expect = 1e-13
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ GE+ ++C C F+Q +L H H GEKP
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
GE+ + C+ C F+Q ++L H +H GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 62.9 bits (154), Expect = 3e-13
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
GE+ + CR C F Q S+L H+ VH G KP
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 60.3 bits (147), Expect = 3e-12
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ GEK + C CD F+Q + +L H+ +H GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQAS-------------------SLRLHQNVHVGEKPSGP 43
Score = 57.6 bits (140), Expect = 3e-11
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GEK + C CD F+Q ++L H VH
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV 36
Score = 42.9 bits (102), Expect = 4e-06
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
G K + C+ C F+Q +L H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLH 31
Score = 32.1 bits (74), Expect = 0.028
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H+ +H GE+P
Sbjct: 27 SLRLHQNVHVGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.12
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 82 RSRRSTHERIHTGERPFRC 100
S H+ +H GE+P
Sbjct: 25 ASSLRLHQNVHVGEKPSGP 43
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 71.8 bits (177), Expect = 3e-16
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C KAF+Q +L++H RVHTGE+P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCR 437
TGE+PY CK CGK F+Q +L++H R+H+GE+P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 66.8 bits (164), Expect = 2e-14
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C+ C K F+Q +L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 2e-14
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C+ C K F+Q +L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ C+ C K F+Q +L +H + HTGEKP
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 64.8 bits (159), Expect = 6e-14
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C+ C K F Q ++L +H+RVHTG KP
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C KAF+Q +L H+R+HTGE+P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLI-------------------QHQRVHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 57.5 bits (140), Expect = 3e-11
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAF+Q +L++H RVHT
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT 36
Score = 47.5 bits (114), Expect = 1e-07
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY CK C KAF+QT +L +H
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQH 31
Score = 31.7 bits (73), Expect = 0.039
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H+R+HTGE+P
Sbjct: 27 HLIQHQRVHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.078
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+ H+R+HTGE+P
Sbjct: 25 TTHLIQHQRVHTGEKPSGP 43
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.4 bits (176), Expect = 3e-16
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGE+ Y C C KAF Q++ L H R+H GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGER + C C K F Q+ L H + H GEKP
Sbjct: 1 GSSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGER + C C K F Q+ L H + H GEKP
Sbjct: 1 GSSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGER Y C CGK F Q++ L H R+H GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGER + C C K F Q+ L H + H GEKP
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GER Y C C K FIQ+S L H+R+H G KP
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGE+ Y C C KAF Q++ L H+RIH GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLS-------------------MHQRIHRGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 57.1 bits (139), Expect = 4e-11
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGE+ Y C C KAF Q++ L H R+H
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR 36
Score = 46.0 bits (110), Expect = 4e-07
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG + Y C C KAF Q L+ H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMH 31
Score = 31.7 bits (73), Expect = 0.033
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
L H+RIH GE+P
Sbjct: 27 TLSMHQRIHRGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.075
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S S H+RIH GE+P
Sbjct: 25 KSTLSMHQRIHRGEKPSGP 43
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 71.4 bits (176), Expect = 3e-16
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TG KPY C C K F+ ++ L+ H R HTG +P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TG +P+ C C KTF+ + L H ++HTG KP
Sbjct: 1 GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TG +P+ C C KTF+ + L H ++HTG KP
Sbjct: 1 GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TG +PY C C K F+ ++ L+ H R H+G +P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TG +P+ C C KTF+ + L H ++HTG KP
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 65.6 bits (161), Expect = 3e-14
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+G +PY C C KTF +S L H+R HTGVKP
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TG KPY C C K F+ ++ L H+R HTG +P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKS-------------------QLIVHQRSHTGVKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 56.8 bits (138), Expect = 5e-11
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TG KPY C C K F+ ++ L+ H R HT
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT 36
Score = 48.3 bits (116), Expect = 5e-08
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TGVKPY C C K F+ L H
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31
Score = 32.1 bits (74), Expect = 0.032
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 336 NLGTHERIHTGERPFRC 352
L H+R HTG +P
Sbjct: 27 QLIVHQRSHTGVKPSGP 43
Score = 30.6 bits (70), Expect = 0.11
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S+ H+R HTG +P
Sbjct: 25 KSQLIVHQRSHTGVKPSGP 43
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 71.4 bits (176), Expect = 3e-16
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C KAF ++NL+ H R HTGE S
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 71.4 bits (176), Expect = 4e-16
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
G+ TGE+P+ C C K F + NL H +THTGE + G
Sbjct: 1 GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44
Score = 71.4 bits (176), Expect = 4e-16
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
G+ TGE+P+ C C K F + NL H +THTGE + G
Sbjct: 1 GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44
Score = 69.8 bits (172), Expect = 1e-15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+ TGE+P+ C C K F + NL H +THTGE + G
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44
Score = 67.9 bits (167), Expect = 6e-15
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C C K F ++NL+ H R H+GE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F +SNL H+R HTG S
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C C KAF ++ NL H+R HTGE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKS-------------------NLMVHQRTHTGESGPSS 43
Score = 56.7 bits (138), Expect = 4e-11
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAF ++NL+ H R HT
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT 36
Score = 47.9 bits (115), Expect = 6e-08
Identities = 13/29 (44%), Positives = 13/29 (44%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C KAF NL H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVH 31
Score = 33.2 bits (77), Expect = 0.012
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 336 NLGTHERIHTGERPFRC 352
NL H+R HTGE
Sbjct: 27 NLMVHQRTHTGESGPSS 43
Score = 30.5 bits (70), Expect = 0.082
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 81 ERSRRSTHERIHTGERPFRC 100
+S H+R HTGE
Sbjct: 24 TKSNLMVHQRTHTGESGPSS 43
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.4 bits (176), Expect = 4e-16
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K+FT ++ L H + HTGER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K+FT + L H K HTGE+
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K+FT + L H K HTGE+
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K+FT + L H K HTGE+
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK FT ++ L H + H+GER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 62.9 bits (154), Expect = 4e-13
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K+F +S L H++ HTG +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C C K+FT ++ L H++ HTGER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKS-------------------RLRIHQKCHTGERHSGP 43
Score = 56.8 bits (138), Expect = 4e-11
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K+FT ++ L H + HT
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT 36
Score = 45.2 bits (108), Expect = 5e-07
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K+F L H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31
Score = 32.5 bits (75), Expect = 0.021
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 336 NLGTHERIHTGERPFRC 352
L H++ HTGER
Sbjct: 27 RLRIHQKCHTGERHSGP 43
Score = 31.0 bits (71), Expect = 0.066
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+SR H++ HTGER
Sbjct: 25 KSRLRIHQKCHTGERHSGP 43
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.4 bits (176), Expect = 4e-16
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEKPY C C KAF A L++H R+HTGE+P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 69.9 bits (172), Expect = 1e-15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCR 437
+GE+PY C CGK F A LV+H R+H+GE+P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 68.7 bits (169), Expect = 3e-15
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+P+ C+ C K F L +H + HTGEKP
Sbjct: 1 GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+P+ C+ C K F L +H + HTGEKP
Sbjct: 1 GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GE+P+ C+ C K F L +H + HTGEKP
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+PY C YC K F + L RH+R+HTG KP
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 59.8 bits (146), Expect = 4e-12
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ +GEKPY C C KAF A L H+RIHTGE+P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSA-------------------ELVRHQRIHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 56.8 bits (138), Expect = 5e-11
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKPY C C KAF A L++H R+HT
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT 36
Score = 47.5 bits (114), Expect = 1e-07
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KPY C C KAF + L +H
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRH 31
Score = 32.5 bits (75), Expect = 0.022
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 336 NLGTHERIHTGERPFRC 352
L H+RIHTGE+P
Sbjct: 27 ELVRHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.066
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+ H+RIHTGE+P
Sbjct: 25 SAELVRHQRIHTGEKPSGP 43
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.4 bits (176), Expect = 4e-16
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TG KPY C C KAF+Q + L +H RVHTGE+P
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TG +PY C CGK F+Q + L +H R+H+GE+P
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TG +P++C C K F+Q L +H + HTGEKP
Sbjct: 1 GSSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TG +P++C C K F+Q L +H + HTGEKP
Sbjct: 1 GSSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+G +PY C C K F Q S L RH+RVHTG KP
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 2e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TG +P++C C K F+Q L +H + HTGEKP
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TG KPY C C KAF+Q + L H+R+HTGE+P
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTS-------------------KLARHQRVHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 57.2 bits (139), Expect = 4e-11
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TG KPY C C KAF+Q + L +H RVHT
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT 36
Score = 47.1 bits (113), Expect = 1e-07
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C KAF+QT L +H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARH 31
Score = 32.5 bits (75), Expect = 0.021
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H+R+HTGE+P
Sbjct: 27 KLARHQRVHTGEKPSGPS 44
Score = 31.4 bits (72), Expect = 0.059
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S+ + H+R+HTGE+P
Sbjct: 25 TSKLARHQRVHTGEKPSGPS 44
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.4 bits (176), Expect = 4e-16
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K+F Q+++L +H R+HTGE+P
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 69.5 bits (171), Expect = 1e-15
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C C K+F Q+ +L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 69.5 bits (171), Expect = 1e-15
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C C K+F Q+ +L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ C C K+F Q+ +L +H + HTGEKP
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F Q+++L +H R+H+GE+P
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 9e-15
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K+FIQ+S+L+RH R+HTG KP
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C K+F Q+++L H RIHTGE+P
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLN-------------------RHRRIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 57.1 bits (139), Expect = 3e-11
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K+F Q+++L +H R+HT
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT 36
Score = 44.8 bits (107), Expect = 8e-07
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K+F Q +L +H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRH 31
Score = 32.1 bits (74), Expect = 0.027
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H RIHTGE+P
Sbjct: 27 HLNRHRRIHTGEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.068
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
+S + H RIHTGE+P
Sbjct: 25 KSHLNRHRRIHTGEKPSGPS 44
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.4 bits (176), Expect = 4e-16
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGE+ Y C C KAF +++ L+ H R+HTGE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGER Y C CGK F +++ L+ H R+H+GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGER + C C K F ++ L H + HTGEKP
Sbjct: 1 GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGER + C C K F ++ L H + HTGEKP
Sbjct: 1 GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGER + C C K F ++ L H + HTGEKP
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GER Y C C K F ++S L H+R+HTG KP
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 59.8 bits (146), Expect = 4e-12
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGE+ Y C C KAF +++ L H+RIHTGE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKS-------------------TLIMHQRIHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 56.7 bits (138), Expect = 5e-11
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGE+ Y C C KAF +++ L+ H R+HT
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHT 36
Score = 47.5 bits (114), Expect = 1e-07
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG + Y C C KAFA+ L H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH 31
Score = 32.1 bits (74), Expect = 0.027
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 336 NLGTHERIHTGERPFRC 352
L H+RIHTGE+P
Sbjct: 27 TLIMHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.056
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 3/21 (14%)
Query: 83 SRRST---HERIHTGERPFRC 100
+R+ST H+RIHTGE+P
Sbjct: 23 ARKSTLIMHQRIHTGEKPSGP 43
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.4 bits (176), Expect = 4e-16
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCK 409
+ +G+KPY C C K F Q +L +H RVHTGER
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 66.8 bits (164), Expect = 1e-14
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +G++P+ C+ C KTF Q +L +H + HTGE+
Sbjct: 1 GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +G++P+ C+ C KTF Q +L +H + HTGE+
Sbjct: 1 GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+G++PY CK C K F Q +L +H R+H+GER
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 64.9 bits (159), Expect = 7e-14
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +G++P+ C+ C KTF Q +L +H + HTGE+
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 64.5 bits (158), Expect = 8e-14
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCK 465
SG++PY C+ C KTFIQ +L++H+RVHTG +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 59.9 bits (146), Expect = 5e-12
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ +G+KPY C C K F Q +L H+R+HTGER
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIG-------------------HLNQHKRVHTGERSSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.0 bits (136), Expect = 9e-11
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +G+KPY C C K F Q +L +H RVHT
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT 36
Score = 44.8 bits (107), Expect = 9e-07
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KPY CK C K F Q G+L +H
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQH 31
Score = 32.9 bits (76), Expect = 0.013
Identities = 15/69 (21%), Positives = 18/69 (26%), Gaps = 39/69 (56%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
CK C KTF Q +L H+R+H
Sbjct: 15 CKECRKTFIQIG---------------------------------------HLNQHKRVH 35
Query: 345 TGERPFRCE 353
TGER
Sbjct: 36 TGERSSGPS 44
Score = 31.4 bits (72), Expect = 0.048
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
+ H+R+HTGER
Sbjct: 25 IGHLNQHKRVHTGERSSGPS 44
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 71.0 bits (175), Expect = 4e-16
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TG KPY C C KAF ++ L+ H R HTGE S
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
G+ TG +P+ C C K F + L H +THTGE + G
Sbjct: 1 GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44
Score = 69.1 bits (170), Expect = 2e-15
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
G+ TG +P+ C C K F + L H +THTGE + G
Sbjct: 1 GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44
Score = 67.5 bits (166), Expect = 7e-15
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+ TG +P+ C C K F + L H +THTGE + G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44
Score = 66.7 bits (164), Expect = 2e-14
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TG +PY C CGK F ++ L+ H R H+GE
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+G +PY C C K F +S L H R HTG S
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 59.8 bits (146), Expect = 4e-12
Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TG KPY C C KAF ++ L H R HTGE
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLI-------------------IHTRTHTGESGPS 42
Query: 175 C 175
Sbjct: 43 S 43
Score = 56.7 bits (138), Expect = 5e-11
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TG KPY C C KAF ++ L+ H R HT
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT 36
Score = 47.9 bits (115), Expect = 7e-08
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
TG+KPY C C KAF L H
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHT 32
Score = 32.1 bits (74), Expect = 0.030
Identities = 7/17 (41%), Positives = 7/17 (41%)
Query: 336 NLGTHERIHTGERPFRC 352
L H R HTGE
Sbjct: 27 YLIIHTRTHTGESGPSS 43
Score = 30.9 bits (71), Expect = 0.076
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S H R HTGE
Sbjct: 25 KSYLIIHTRTHTGESGPSS 43
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 4e-16
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP+ CG C K++ QR +L +H RVHTGE+P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+PF+C C K++ Q+ +L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+PF+C C K++ Q+ +L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P+ C CGK + Q+ +L +H R+H+GE+P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 9e-15
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+PF+C C K++ Q+ +L +H + HTGEKP
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P+ C C K++ Q+ +L +H+RVHTG KP
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKP+ CG C K++ QR +L H+R+HTGE+P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLT-------------------QHQRVHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 57.1 bits (139), Expect = 4e-11
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKP+ CG C K++ QR +L +H RVHT
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT 36
Score = 47.5 bits (114), Expect = 9e-08
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KP+ C C K++ Q +LT+H
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQH 31
Score = 32.5 bits (75), Expect = 0.023
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H+R+HTGE+P
Sbjct: 27 HLTQHQRVHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.085
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 82 RSRRSTHERIHTGERPFRC 100
R + H+R+HTGE+P
Sbjct: 25 RVHLTQHQRVHTGEKPSGP 43
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 4e-16
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ + EKPY C C K + +R NL H RVH GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 71.0 bits (175), Expect = 4e-16
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ + E+P++CE C K + ++ NL H + H GEK
Sbjct: 1 GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 71.0 bits (175), Expect = 4e-16
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ + E+P++CE C K + ++ NL H + H GEK
Sbjct: 1 GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 69.8 bits (172), Expect = 1e-15
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ + E+P++CE C K + ++ NL H + H GEK
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+ E+PY C+ CGK + ++ NL H R+H GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
S E+PY C C K + ++ NLD H+RVH G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ + EKPY C C K + +R NL H+R+H GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLD-------------------MHQRVHMGEKTSGP 43
Score = 57.1 bits (139), Expect = 4e-11
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ + EKPY C C K + +R NL H RVH
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM 36
Score = 46.3 bits (111), Expect = 2e-07
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+ KPY C+ C K + + NL H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31
Score = 33.2 bits (77), Expect = 0.012
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
NL H+R+H GE+
Sbjct: 27 NLDMHQRVHMGEKTSGP 43
Score = 32.1 bits (74), Expect = 0.031
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 82 RSRRSTHERIHTGERPFRC 100
R H+R+H GE+
Sbjct: 25 RLNLDMHQRVHMGEKTSGP 43
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 4e-16
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEK YNC C K+F++ LLKH R+H+GE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+ Y+CK CGK F++ L+KH RLHSGE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+ + C+ C K+F++ P L KH + H+GEKP
Sbjct: 1 GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+ + C+ C K+F++ P L KH + H+GEKP
Sbjct: 1 GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 67.6 bits (166), Expect = 9e-15
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+ + C+ C K+F++ P L KH + H+GEKP
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 64.9 bits (159), Expect = 7e-14
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+ Y+C+ C K+F + L +HER+H+G KP
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 59.5 bits (145), Expect = 5e-12
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEK YNC C K+F++ L HER+H+GE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAP-------------------CLLKHERLHSGEKPSGP 43
Score = 56.8 bits (138), Expect = 5e-11
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEK YNC C K+F++ LLKH R+H+
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36
Score = 46.4 bits (111), Expect = 2e-07
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
TG K Y+CK C K+F++ L KHE
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHE 32
Score = 32.5 bits (75), Expect = 0.019
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 336 NLGTHERIHTGERPFRC 352
L HER+H+GE+P
Sbjct: 27 CLLKHERLHSGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.052
Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Query: 83 SRRS---THERIHTGERPFRC 100
SR HER+H+GE+P
Sbjct: 23 SRAPCLLKHERLHSGEKPSGP 43
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 5e-16
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCK 409
+ TGEKPY C C KAF+ R++L H +HTG++P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 67.6 bits (166), Expect = 9e-15
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F+ +++L H +H+G++P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C C K F+ + +L H HTG+KP
Sbjct: 1 GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C C K F+ + +L H HTG+KP
Sbjct: 1 GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ C C K F+ + +L H HTG+KP
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 64.9 bits (159), Expect = 7e-14
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCK 465
+GE+PY C C K F +S+L H+ +HTG KP
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 60.6 bits (148), Expect = 2e-12
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C KAF+ R+ +L TH+ IHTG++P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRS-------------------SLTTHQAIHTGKKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.8 bits (138), Expect = 5e-11
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAF+ R++L H +HT
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT 36
Score = 47.9 bits (115), Expect = 6e-08
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
TG KPY C C KAF+ +LT H+
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQ 32
Score = 32.9 bits (76), Expect = 0.017
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
RS +TH+ IHTG++P
Sbjct: 24 VRSSLTTHQAIHTGKKPSGPS 44
Score = 32.9 bits (76), Expect = 0.017
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L TH+ IHTG++P
Sbjct: 27 SLTTHQAIHTGKKPSGPS 44
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 71.1 bits (175), Expect = 5e-16
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYS 407
+ GEKPY C C KAF+Q+ +L+ HIRVHTG P S
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 66.1 bits (162), Expect = 3e-14
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYN 127
GE+P+RC+ C K F+Q+ +L H++ HTG P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 66.1 bits (162), Expect = 3e-14
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 163 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYN 202
GE+P+RC+ C K F+Q+ +L H++ HTG P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 66.1 bits (162), Expect = 3e-14
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 340 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYN 379
GE+P+RC+ C K F+Q+ +L H++ HTG P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 65.7 bits (161), Expect = 3e-14
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPY 434
GE+PY C CGK F+Q+ +L+ H R+H+G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 62.2 bits (152), Expect = 6e-13
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYS 463
+ GE+PY C C K F Q+ +L H RVHTG P S
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 59.1 bits (144), Expect = 7e-12
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GEKPY C C KAF+Q+ +L+ HIRVHT
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT 35
Score = 57.2 bits (139), Expect = 3e-11
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 19/58 (32%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
+ GEKPY C C KAF+Q+ +L H R+HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKG-------------------SLIVHIRVHTGSGPS 40
Score = 47.9 bits (115), Expect = 6e-08
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
G KPY C C KAF+Q G+L H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH 30
Score = 29.1 bits (66), Expect = 0.28
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 336 NLGTHERIHTGERPF 350
+L H R+HTG P
Sbjct: 26 SLIVHIRVHTGSGPS 40
Score = 27.9 bits (63), Expect = 0.82
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 81 ERSRRSTHERIHTGERPF 98
++ H R+HTG P
Sbjct: 23 QKGSLIVHIRVHTGSGPS 40
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 71.0 bits (175), Expect = 5e-16
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCK 409
+ TG++PY C C KAF +++L+ H R HTGE+P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 68.7 bits (169), Expect = 3e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TG+RPY C CGK F +++L+ H R H+GE+P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TG+RP+ C C K F + +L H ++HTGEKP
Sbjct: 1 GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TG+RP+ C C K F + +L H ++HTGEKP
Sbjct: 1 GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TG+RP+ C C K F + +L H ++HTGEKP
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCK 465
+G+RPY C C K F +S+L H R HTG KP
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 58.7 bits (143), Expect = 1e-11
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TG++PY C C KAF ++ +L H R HTGE+P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKS-------------------SLICHRRSHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 55.6 bits (135), Expect = 1e-10
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TG++PY C C KAF +++L+ H R HT
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT 36
Score = 46.0 bits (110), Expect = 4e-07
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG +PY C C KAF +L H
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICH 31
Score = 31.7 bits (73), Expect = 0.038
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H R HTGE+P
Sbjct: 27 SLICHRRSHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.12
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 81 ERSRRSTHERIHTGERPFRC 100
+S H R HTGE+P
Sbjct: 24 TKSSLICHRRSHTGEKPSGP 43
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 5e-16
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP++C C KAF+ L +H R+HTGE+P
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 8e-15
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P+ C CGK F+ L +H R+H+GE+P
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 9e-15
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+PF C C K F+ L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 9e-15
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+PF C C K F+ L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+PF C C K F+ L +H + HTGEKP
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 64.5 bits (158), Expect = 1e-13
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P+ C C K F L++H R+HTG KP
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKP++C C KAF+ L H RIHTGE+P
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHI-------------------GLNQHRRIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.8 bits (138), Expect = 6e-11
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKP++C C KAF+ L +H R+HT
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT 36
Score = 46.4 bits (111), Expect = 2e-07
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
TG KP+ C C KAF+ L +H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR 32
Score = 32.9 bits (76), Expect = 0.014
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H RIHTGE+P
Sbjct: 27 GLNQHRRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.037
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
+ + H RIHTGE+P
Sbjct: 24 DHIGLNQHRRIHTGEKPSGPS 44
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 5e-16
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+PF+C++C K+F + L +H HT EKP
Sbjct: 1 GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 71.0 bits (175), Expect = 5e-16
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+PF+C++C K+F + L +H HT EKP
Sbjct: 1 GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 70.6 bits (174), Expect = 7e-16
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP+ C +C K+F R+ L +H VHT E+P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 69.4 bits (171), Expect = 2e-15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+PF+C++C K+F + L +H HT EKP
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P+ C +CGK F ++ L +H+ +H+ E+P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P+ C C K+F +S L+RH VHT KP
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKP+ C +C K+F R+ L H +HT E+P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRS-------------------RLNRHSMVHTAEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 56.7 bits (138), Expect = 5e-11
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKP+ C +C K+F R+ L +H VHT
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT 36
Score = 47.5 bits (114), Expect = 1e-07
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
TG KP+ C IC K+F L +H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHS 32
Score = 33.2 bits (77), Expect = 0.010
Identities = 6/18 (33%), Positives = 8/18 (44%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H +HT E+P
Sbjct: 27 RLNRHSMVHTAEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.018
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
RSR + H +HT E+P
Sbjct: 24 GRSRLNRHSMVHTAEKPSGPS 44
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 5e-16
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEKP+ C C KAF Q +L H+R+HTGE+P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+PF+C+ C K F Q +L H++ HTGEKP
Sbjct: 1 GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+PF+C+ C K F Q +L H++ HTGEKP
Sbjct: 1 GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+P+ CK CGK F Q +L H R+H+GE+P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 9e-15
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GE+PF+C+ C K F Q +L H++ HTGEKP
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 65.2 bits (160), Expect = 5e-14
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+P+ C+ C K F Q +L H R+HTG KP
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 61.0 bits (149), Expect = 2e-12
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ +GEKP+ C C KAF Q +L +H RIHTGE+P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLA-------------------SHLRIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 57.1 bits (139), Expect = 4e-11
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKP+ C C KAF Q +L H+R+HT
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT 36
Score = 47.1 bits (113), Expect = 1e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KP+ CK C KAF Q +L H
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASH 31
Score = 32.5 bits (75), Expect = 0.023
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L +H RIHTGE+P
Sbjct: 27 HLASHLRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.041
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
++H RIHTGE+P
Sbjct: 25 NIHLASHLRIHTGEKPSGPS 44
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 5e-16
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGE+P+ C C K+F Q A+L++H R+HTGE+P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGERP+ C CGK F Q A+L++H R+H+GE+P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGERP +C C K+F Q +L +H + HTGEKP
Sbjct: 1 GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGERP +C C K+F Q +L +H + HTGEKP
Sbjct: 1 GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGERP +C C K+F Q +L +H + HTGEKP
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 64.8 bits (159), Expect = 7e-14
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GERP+ C C K+FIQ ++L +H+R+HTG KP
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGE+P+ C C K+F Q A+L H+RIHTGE+P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLI-------------------QHQRIHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 56.4 bits (137), Expect = 7e-11
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGE+P+ C C K+F Q A+L++H R+HT
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT 36
Score = 46.0 bits (110), Expect = 3e-07
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG +P+ C C K+F Q+ +L +H
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQH 31
Score = 32.1 bits (74), Expect = 0.026
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H+RIHTGE+P
Sbjct: 27 HLIQHQRIHTGEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.070
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
+ H+RIHTGE+P
Sbjct: 25 SAHLIQHQRIHTGEKPSGPS 44
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 5e-16
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEKP+ C C K FTQ ++L H RVHTGE+P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+PF+CE C K FTQ +L H + HTGEKP
Sbjct: 1 GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+PF+CE C K FTQ +L H + HTGEKP
Sbjct: 1 GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 68.0 bits (167), Expect = 6e-15
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+P+ C+ CGKRFTQ ++L H R+H+GE+P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 67.6 bits (166), Expect = 7e-15
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GE+PF+CE C K FTQ +L H + HTGEKP
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+P+ C C K F Q S+L H+RVHTG KP
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 60.3 bits (147), Expect = 3e-12
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ +GEKP+ C C K FTQ ++L +H+R+HTGE+P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLH-------------------SHQRVHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 56.4 bits (137), Expect = 6e-11
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKP+ C C K FTQ ++L H RVHT
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT 36
Score = 46.8 bits (112), Expect = 2e-07
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KP+ C+ C K F Q +L H
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSH 31
Score = 32.1 bits (74), Expect = 0.031
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 336 NLGTHERIHTGERPFRC 352
+L +H+R+HTGE+P
Sbjct: 27 HLHSHQRVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.062
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 82 RSRRSTHERIHTGERPFRC 100
S +H+R+HTGE+P
Sbjct: 25 NSHLHSHQRVHTGEKPSGP 43
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 5e-16
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K FTQ ++L H R+HTG +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 69.5 bits (171), Expect = 2e-15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K FTQ +L H + HTG KP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 69.5 bits (171), Expect = 2e-15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K FTQ +L H + HTG KP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK FTQ ++L H R+H+G +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K FTQ +L H + HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F Q S+L H+R+HTGVKP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 60.6 bits (148), Expect = 2e-12
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C K FTQ ++L H+RIHTG +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLA-------------------NHQRIHTGVKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.8 bits (138), Expect = 5e-11
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K FTQ ++L H R+HT
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT 36
Score = 47.1 bits (113), Expect = 1e-07
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K F Q +L H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANH 31
Score = 32.5 bits (75), Expect = 0.019
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H+RIHTG +P
Sbjct: 27 HLANHQRIHTGVKPSGPS 44
Score = 31.3 bits (72), Expect = 0.045
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S + H+RIHTG +P
Sbjct: 25 NSHLANHQRIHTGVKPSGPS 44
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 6e-16
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C +C KAF+ A+L +H RVH+GE+P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 67.5 bits (166), Expect = 8e-15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C +C K F+ A+L +H R+HSGE+P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ C+VC K F+ +L +H + H+GEKP
Sbjct: 1 GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ C+VC K F+ +L +H + H+GEKP
Sbjct: 1 GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ C+VC K F+ +L +H + H+GEKP
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F ++L +H+RVH+G KP
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 59.8 bits (146), Expect = 4e-12
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C +C KAF+ A +L H+R+H+GE+P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHA-------------------SLTQHQRVHSGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 56.4 bits (137), Expect = 6e-11
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C +C KAF+ A+L +H RVH+
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36
Score = 47.5 bits (114), Expect = 8e-08
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C +C KAF+ +LT+H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQH 31
Score = 32.9 bits (76), Expect = 0.017
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H+R+H+GE+P
Sbjct: 27 SLTQHQRVHSGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.046
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
+ + H+R+H+GE+P
Sbjct: 24 HHASLTQHQRVHSGEKPSGPS 44
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 70.6 bits (174), Expect = 6e-16
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP+ C C K+F+ + L H R+HTGE+P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P+ C CGK F+ + L H R+H+GE+P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+PF C C K+F+ L H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+PF C C K+F+ L H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P+ C C K+F S L H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 3e-14
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+PF C C K+F+ L H + HTGEKP
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKP+ C C K+F+ + L TH+RIHTGE+P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISS-------------------QLATHQRIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.4 bits (137), Expect = 7e-11
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKP+ C C K+F+ + L H R+HT
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHT 36
Score = 47.9 bits (115), Expect = 6e-08
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KP+ C C K+F+ + L H
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATH 31
Score = 33.2 bits (77), Expect = 0.012
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 336 NLGTHERIHTGERPFRCE 353
L TH+RIHTGE+P
Sbjct: 27 QLATHQRIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.053
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S+ +TH+RIHTGE+P
Sbjct: 25 SSQLATHQRIHTGEKPSGPS 44
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 70.7 bits (174), Expect = 6e-16
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
G+ TGE+PF+C+ C F+ +L+KH+++H P
Sbjct: 1 GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 70.7 bits (174), Expect = 6e-16
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
G+ TGE+PF+C+ C F+ +L+KH+++H P
Sbjct: 1 GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 69.5 bits (171), Expect = 2e-15
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP+ C C F+ +L KH+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 68.8 bits (169), Expect = 3e-15
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+ TGE+PF+C+ C F+ +L+KH+++H P
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 66.5 bits (163), Expect = 2e-14
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P+ CK CG F+ +L KH R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 61.4 bits (150), Expect = 1e-12
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P+ C+ C F +L +H R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 56.8 bits (138), Expect = 4e-11
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKP+ C C F+ +L KH+R H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE 36
Score = 55.3 bits (134), Expect = 2e-10
Identities = 13/60 (21%), Positives = 17/60 (28%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKP+ C C F+ +L H R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSC-------------------SLFKHLRSHERTDPSGP 43
Score = 45.3 bits (108), Expect = 5e-07
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
TG KP+ CK C F+ + +L KH
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHL 32
Score = 31.4 bits (72), Expect = 0.057
Identities = 11/70 (15%), Positives = 13/70 (18%), Gaps = 39/70 (55%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
F CK C F+ S +L H R
Sbjct: 13 FQCKECGMNFSWSC---------------------------------------SLFKHLR 33
Query: 343 IHTGERPFRC 352
H P
Sbjct: 34 SHERTDPSGP 43
Score = 26.4 bits (59), Expect = 2.8
Identities = 12/76 (15%), Positives = 13/76 (17%), Gaps = 45/76 (59%)
Query: 25 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSR 84
F CK C F+ S L K
Sbjct: 13 FQCKECGMNFSWSC----SLFK-------------------------------------- 30
Query: 85 RSTHERIHTGERPFRC 100
H R H P
Sbjct: 31 ---HLRSHERTDPSGP 43
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.7 bits (174), Expect = 6e-16
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ GEKPY C C KAF+ ++ L+ H+R H+GE+P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ GE+P+ C C K F+ + L HM+TH+GEKP
Sbjct: 1 GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ GE+P+ C C K F+ + L HM+TH+GEKP
Sbjct: 1 GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 67.6 bits (166), Expect = 9e-15
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ GE+P+ C C K F+ + L HM+TH+GEKP
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
GE+PY C CGK F+ ++ L+ H R HSGE+P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 64.5 bits (158), Expect = 1e-13
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F +S L H R H+G KP
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 59.1 bits (144), Expect = 7e-12
Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ GEKPY C C KAF+ ++ L H R H+GE+P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKS-------------------YLIIHMRTHSGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 56.0 bits (136), Expect = 8e-11
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GEKPY C C KAF+ ++ L+ H+R H+
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36
Score = 47.5 bits (114), Expect = 8e-08
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
G KPY C C KAF+ L H
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHM 32
Score = 32.1 bits (74), Expect = 0.028
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H R H+GE+P
Sbjct: 27 YLIIHMRTHSGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.094
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
+S H R H+GE+P
Sbjct: 25 KSYLIIHMRTHSGEKPSGPS 44
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.6 bits (174), Expect = 6e-16
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ G+K + C C K FTQ ++L H R+HTGE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 69.8 bits (172), Expect = 1e-15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ G++ F+C C KTFTQ +L H + HTGEKP
Sbjct: 1 GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 69.8 bits (172), Expect = 1e-15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ G++ F+C C KTFTQ +L H + HTGEKP
Sbjct: 1 GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ G++ F+C C KTFTQ +L H + HTGEKP
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
G++ + C C K FTQ ++L H R+H+GE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 64.8 bits (159), Expect = 7e-14
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+G++ + C C KTF Q S+L H+R+HTG KP
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ G+K + C C K FTQ + +L H+RIHTGE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSS-------------------SLTVHQRIHTGEKPSGP 43
Score = 56.8 bits (138), Expect = 5e-11
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ G+K + C C K FTQ ++L H R+HT
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT 36
Score = 46.7 bits (112), Expect = 2e-07
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
G K + C C K F Q+ +LT H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31
Score = 32.5 bits (75), Expect = 0.021
Identities = 18/68 (26%), Positives = 21/68 (30%), Gaps = 39/68 (57%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
C C KTFTQSS +L H+RIH
Sbjct: 15 CNECKKTFTQSS---------------------------------------SLTVHQRIH 35
Query: 345 TGERPFRC 352
TGE+P
Sbjct: 36 TGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.059
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 82 RSRRSTHERIHTGERPFRC 100
S + H+RIHTGE+P
Sbjct: 25 SSSLTVHQRIHTGEKPSGP 43
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.6 bits (174), Expect = 6e-16
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPYNC C KAF + L +H R+HTGE+P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P+ CE C K F L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P+ CE C K F L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY+C+ CGK F + L +H R+H+GE+P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P+ CE C K F L +H + HTGEKP
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY+C C K FI S L H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPYNC C KAF + L H+RIHTGE+P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQ-------------------EHQRIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.8 bits (138), Expect = 5e-11
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPYNC C KAF + L +H R+HT
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT 36
Score = 48.3 bits (116), Expect = 6e-08
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY+C+ C KAF L +H
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEH 31
Score = 32.9 bits (76), Expect = 0.016
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H+RIHTGE+P
Sbjct: 27 QLQEHQRIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.047
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S+ H+RIHTGE+P
Sbjct: 25 DSQLQEHQRIHTGEKPSGPS 44
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.6 bits (174), Expect = 6e-16
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEKP+ C C K FTQ + L H RVHTGE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 69.9 bits (172), Expect = 1e-15
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+PF+CE C K FTQ L H + HTGEKP
Sbjct: 1 GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 69.9 bits (172), Expect = 1e-15
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+PF+CE C K FTQ L H + HTGEKP
Sbjct: 1 GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GE+PF+CE C K FTQ L H + HTGEKP
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+P+ C+ CGKRFTQ + L H R+H+GE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 64.9 bits (159), Expect = 7e-14
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+P+ C C K F Q S L H+RVHTG KP
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 59.8 bits (146), Expect = 5e-12
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ +GEKP+ C C K FTQ + L +H+R+HTGE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLH-------------------SHQRVHTGEKPSGP 43
Score = 56.8 bits (138), Expect = 5e-11
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKP+ C C K FTQ + L H RVHT
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT 36
Score = 47.9 bits (115), Expect = 8e-08
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KP+ C+ C K F Q L H
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSH 31
Score = 32.1 bits (74), Expect = 0.029
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 336 NLGTHERIHTGERPFRC 352
L +H+R+HTGE+P
Sbjct: 27 QLHSHQRVHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.10
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 82 RSRRSTHERIHTGERPFRC 100
S+ +H+R+HTGE+P
Sbjct: 25 NSQLHSHQRVHTGEKPSGP 43
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.6 bits (174), Expect = 7e-16
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C KAF+Q + L +H R+HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K F+Q L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K F+Q L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 5e-15
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F+Q + L +H R+H+GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 2e-14
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K F+Q L +H + HTGEKP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F Q S L RH+R+HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 59.8 bits (146), Expect = 4e-12
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C KAF+Q + L H+RIHTGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLA-------------------RHQRIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.4 bits (137), Expect = 7e-11
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAF+Q + L +H R+HT
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT 36
Score = 48.3 bits (116), Expect = 6e-08
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C KAF+QT L +H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARH 31
Score = 32.5 bits (75), Expect = 0.019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H+RIHTGE+P
Sbjct: 27 KLARHQRIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.059
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S+ + H+RIHTGE+P
Sbjct: 25 TSKLARHQRIHTGEKPSGPS 44
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.6 bits (174), Expect = 7e-16
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGE PY C C KAF+++ L+ H R H GE+P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE PY C CGK F+++ L+ H R H+GE+P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE P+ C C K F+++ L H +TH GEKP
Sbjct: 1 GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE P+ C C K F+++ L H +TH GEKP
Sbjct: 1 GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE P+ C C K F+++ L H +TH GEKP
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 62.9 bits (154), Expect = 3e-13
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE PY C C K F ++ L H+R H G KP
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 58.3 bits (142), Expect = 1e-11
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGE PY C C KAF+++ L +H+R H GE+P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKY-------------------QLISHQRTHAGEKPSGP 43
Score = 56.0 bits (136), Expect = 8e-11
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGE PY C C KAF+++ L+ H R H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHA 36
Score = 48.3 bits (116), Expect = 4e-08
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG PY C C KAF++ L H
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISH 31
Score = 31.3 bits (72), Expect = 0.049
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
L +H+R H GE+P
Sbjct: 27 QLISHQRTHAGEKPSGP 43
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 8e-16
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ GEK Y C +C K F+Q ++L H RVHTGE+P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 69.9 bits (172), Expect = 1e-15
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ GE+ ++C+VC K F+Q +L H + HTGEKP
Sbjct: 1 GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 69.9 bits (172), Expect = 1e-15
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ GE+ ++C+VC K F+Q +L H + HTGEKP
Sbjct: 1 GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ GE+ ++C+VC K F+Q +L H + HTGEKP
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
GE+ Y C +CGK F+Q ++L H R+H+GE+P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 64.9 bits (159), Expect = 7e-14
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
GE+ Y C C K F Q S+L H+RVHTG KP
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ GEK Y C +C K F+Q ++L TH+R+HTGE+P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQ-------------------THQRVHTGEKPSGP 43
Score = 56.4 bits (137), Expect = 8e-11
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GEK Y C +C K F+Q ++L H RVHT
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT 36
Score = 46.4 bits (111), Expect = 3e-07
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
G K Y C +C K F+Q+ +L H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTH 31
Score = 33.7 bits (78), Expect = 0.007
Identities = 17/68 (25%), Positives = 22/68 (32%), Gaps = 39/68 (57%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
C VC K F+QSS +L TH+R+H
Sbjct: 15 CDVCGKEFSQSS---------------------------------------HLQTHQRVH 35
Query: 345 TGERPFRC 352
TGE+P
Sbjct: 36 TGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.035
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 82 RSRRSTHERIHTGERPFRC 100
S TH+R+HTGE+P
Sbjct: 25 SSHLQTHQRVHTGEKPSGP 43
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 70.3 bits (173), Expect = 8e-16
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TG+KP+ C C K+F + NL+ H R+HTGE+
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TG++PF C C K+F + NL H + HTGEK
Sbjct: 1 GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TG++PF C C K+F + NL H + HTGEK
Sbjct: 1 GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TG++P+ C CGK F + NLV H R+H+GE+
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TG++PF C C K+F + NL H + HTGEK
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 64.1 bits (157), Expect = 1e-13
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+G++P+ C +C K+F + NL H+R+HTG K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TG+KP+ C C K+F + NL TH+RIHTGE+
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKG-------------------NLVTHQRIHTGEKSGPS 43
Score = 56.4 bits (137), Expect = 7e-11
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TG+KP+ C C K+F + NL+ H R+HT
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT 36
Score = 47.2 bits (113), Expect = 1e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KP+ C C K+F GNL H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31
Score = 33.3 bits (77), Expect = 0.011
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 336 NLGTHERIHTGERPFRC 352
NL TH+RIHTGE+
Sbjct: 27 NLVTHQRIHTGEKSGPS 43
Score = 31.0 bits (71), Expect = 0.073
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 81 ERSRRSTHERIHTGERPFRC 100
+ TH+RIHTGE+
Sbjct: 24 AKGNLVTHQRIHTGEKSGPS 43
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 8e-16
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEKPY C C KAF + +L +H R+HTG RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+P++C C K F + +L +H + HTG +P
Sbjct: 1 GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+P++C C K F + +L +H + HTG +P
Sbjct: 1 GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+PY C CGK F + +L +H R+H+G RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GE+P++C C K F + +L +H + HTG +P
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 65.2 bits (160), Expect = 5e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+PY C C K F + ++L+ H R+HTG +P
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 19/62 (30%), Positives = 23/62 (37%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ +GEKPY C C KAF + +L H RIHTG RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLN-------------------EHRRIHTGYRPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.0 bits (136), Expect = 1e-10
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKPY C C KAF + +L +H R+HT
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT 36
Score = 47.5 bits (114), Expect = 8e-08
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KPY C C KAF + +L +H
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEH 31
Score = 32.9 bits (76), Expect = 0.017
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H RIHTG RP
Sbjct: 27 HLNEHRRIHTGYRPSGPS 44
Score = 31.7 bits (73), Expect = 0.034
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
+ + H RIHTG RP
Sbjct: 25 HTHLNEHRRIHTGYRPSGPS 44
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 70.2 bits (173), Expect = 8e-16
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGE PY C C K F+++ L+ H + H+G+ S
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
G+ TGE P+ C C K F+++ L H KTH+G+ + G
Sbjct: 1 GSSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44
Score = 67.9 bits (167), Expect = 6e-15
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
G+ TGE P+ C C K F+++ L H KTH+G+ + G
Sbjct: 1 GSSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44
Score = 65.6 bits (161), Expect = 3e-14
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+ TGE P+ C C K F+++ L H KTH+G+ + G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44
Score = 64.1 bits (157), Expect = 1e-13
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE PY C C K F ++ L H++ H+G S
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE PY C CGK F+++ LV H + HSG+
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 57.5 bits (140), Expect = 2e-11
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGE PY C C K F+++ L +H++ H+G+
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKD-------------------QLVSHQKTHSGQSGPS 42
Query: 175 C 175
Sbjct: 43 S 43
Score = 55.2 bits (134), Expect = 2e-10
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGE PY C C K F+++ L+ H + H+
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36
Score = 42.1 bits (100), Expect = 6e-06
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG PY C C K F++ L H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSH 31
Score = 31.3 bits (72), Expect = 0.048
Identities = 4/17 (23%), Positives = 9/17 (52%)
Query: 336 NLGTHERIHTGERPFRC 352
L +H++ H+G+
Sbjct: 27 QLVSHQKTHSGQSGPSS 43
Score = 30.5 bits (70), Expect = 0.081
Identities = 5/21 (23%), Positives = 11/21 (52%), Gaps = 3/21 (14%)
Query: 83 SRRS---THERIHTGERPFRC 100
SR+ +H++ H+G+
Sbjct: 23 SRKDQLVSHQKTHSGQSGPSS 43
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 70.3 bits (173), Expect = 9e-16
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K F R +L H VHTGE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++CE C K F + +L+ H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++CE C K F + +L+ H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 68.0 bits (167), Expect = 6e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++CE C K F + +L+ H HTGEKP
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C+ CGK F + +L H+ +H+GE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 64.1 bits (157), Expect = 1e-13
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K FI + +L H VHTG KP
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 3e-12
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C C K F R +L+ TH +HTGE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLY-------------------THHMVHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 56.0 bits (136), Expect = 9e-11
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K F R +L H VHT
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT 36
Score = 46.0 bits (110), Expect = 3e-07
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C+ C K F +L H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTH 31
Score = 33.7 bits (78), Expect = 0.008
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L TH +HTGE+P
Sbjct: 27 DLYTHHMVHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.024
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
R TH +HTGE+P
Sbjct: 25 RRDLYTHHMVHTGEKPSGPS 44
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.3 bits (173), Expect = 9e-16
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP+ C C K+F+ + L+ H R+HTGE P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 67.9 bits (167), Expect = 5e-15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P+ C+ CGK F+ + L+ H R+H+GE P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P C C K+F+ L H + HTGE P
Sbjct: 1 GSSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P C C K+F+ L H + HTGE P
Sbjct: 1 GSSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 64.5 bits (158), Expect = 9e-14
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P+ CR C K+F S L H+R+HTG P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 64.5 bits (158), Expect = 1e-13
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P C C K+F+ L H + HTGE P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 58.7 bits (143), Expect = 1e-11
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKP+ C C K+F+ + L H+RIHTGE P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNS-------------------QLIVHQRIHTGENPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 56.0 bits (136), Expect = 1e-10
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKP+ C C K+F+ + L+ H R+HT
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT 36
Score = 46.8 bits (112), Expect = 2e-07
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KP+ C+ C K+F+ L H
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVH 31
Score = 31.7 bits (73), Expect = 0.038
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
L H+RIHTGE P
Sbjct: 27 QLIVHQRIHTGENPSGP 43
Score = 30.2 bits (69), Expect = 0.12
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 82 RSRRSTHERIHTGERPFRC 100
S+ H+RIHTGE P
Sbjct: 25 NSQLIVHQRIHTGENPSGP 43
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 9e-16
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K FTQ ++L +H +HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K FTQ +L +H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 69.1 bits (170), Expect = 2e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K FTQ +L +H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 68.3 bits (168), Expect = 5e-15
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK FTQ ++L +H +H+GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 7e-15
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K FTQ +L +H HTGEKP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F Q S+L RH +HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 59.8 bits (146), Expect = 4e-12
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C K FTQ ++L H IHTGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLA-------------------RHRGIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.4 bits (137), Expect = 7e-11
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K FTQ ++L +H +HT
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT 36
Score = 45.2 bits (108), Expect = 7e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K F Q +L +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH 31
Score = 31.7 bits (73), Expect = 0.032
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H IHTGE+P
Sbjct: 27 HLARHRGIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.054
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S + H IHTGE+P
Sbjct: 25 NSHLARHRGIHTGEKPSGPS 44
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.3 bits (173), Expect = 9e-16
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+P+ C C KTF+Q+ L H +THTGEKP
Sbjct: 1 GSSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 70.3 bits (173), Expect = 9e-16
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+P+ C C KTF+Q+ L H +THTGEKP
Sbjct: 1 GSSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 69.5 bits (171), Expect = 2e-15
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEKPY C C K F+Q++ L H R HTGE+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 5e-15
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GE+P+ C C KTF+Q+ L H +THTGEKP
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 2e-14
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+PY C CGK F+Q++ L H R H+GE+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 65.2 bits (160), Expect = 5e-14
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+PY C C KTF Q+S L H+R HTG KP
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 1e-11
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ +GEKPY C C K F+Q++ L H+R HTGE+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILS-------------------AHQRTHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 55.2 bits (134), Expect = 2e-10
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKPY C C K F+Q++ L H R HT
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT 36
Score = 46.0 bits (110), Expect = 3e-07
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KPY C C K F+Q L+ H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAH 31
Score = 31.3 bits (72), Expect = 0.051
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H+R HTGE+P
Sbjct: 27 ILSAHQRTHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.086
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
++S S H+R HTGE+P
Sbjct: 24 QKSILSAHQRTHTGEKPSGPS 44
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 9e-16
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K FTQ ++L +H RVHTG +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK FTQ ++L +H R+H+G +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K FTQ +L +H + HTG KP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K FTQ +L +H + HTG KP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K FTQ +L +H + HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F Q S+L RH RVHTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 59.1 bits (144), Expect = 7e-12
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C K FTQ + +L H R+HTG +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNS-------------------HLARHRRVHTGGKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 56.0 bits (136), Expect = 9e-11
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K FTQ ++L +H RVHT
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT 36
Score = 44.8 bits (107), Expect = 9e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K F Q +L +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH 31
Score = 31.3 bits (72), Expect = 0.046
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H R+HTG +P
Sbjct: 27 HLARHRRVHTGGKPSGPS 44
Score = 31.0 bits (71), Expect = 0.079
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S + H R+HTG +P
Sbjct: 25 NSHLARHRRVHTGGKPSGPS 44
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 71.2 bits (174), Expect = 9e-16
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 364 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVK 423
+ K K H G++ C C F +R+ + + C+ C K Q+A L K
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57
Query: 424 HNRLHSGERPY 434
SG++
Sbjct: 58 DEGNESGKKTS 68
Score = 68.1 bits (166), Expect = 1e-14
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 391 ANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLD 450
+ K ++H G+R C CG F +++ L + + C C K Q++ L+
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56
Query: 451 RHERVHTGVKPY 462
+ E +G K
Sbjct: 57 KDEGNESGKKTS 68
Score = 67.4 bits (164), Expect = 2e-14
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 395
+ G ++IH G+R +C C F ++ T + K C C K Q A L K
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRR-------STLSRRKTPMCEKCRKDSCQEAALNK 57
Query: 396 HIRVHTGERPY 406
+G++
Sbjct: 58 DEGNESGKKTS 68
Score = 63.1 bits (153), Expect = 7e-13
Identities = 17/90 (18%), Positives = 27/90 (30%), Gaps = 26/90 (28%)
Query: 112 NLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGER 171
+ K K H G++ C C F +R+ + +
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRST--------------------------LSRRK 38
Query: 172 PFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 201
CE C K Q+ L K +G+K
Sbjct: 39 TPMCEKCRKDSCQEAALNKDEGNESGKKTS 68
Score = 61.2 bits (148), Expect = 3e-12
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 7/67 (10%)
Query: 159 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 218
+ G ++IH G+R +C C F ++ T + K C C K Q A L K
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRR-------STLSRRKTPMCEKCRKDSCQEAALNK 57
Query: 219 HIRVHTE 225
+
Sbjct: 58 DEGNESG 64
Score = 58.5 bits (141), Expect = 3e-11
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 419 ANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLT 478
+ K ++H G+R C C FI++S L R K C+ C K Q L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56
Query: 479 KHE 481
K E
Sbjct: 57 KDE 59
Score = 55.1 bits (132), Expect = 4e-10
Identities = 17/91 (18%), Positives = 27/91 (29%), Gaps = 26/91 (28%)
Query: 83 SRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLW 142
++IH G+R +C C F ++ T + K C C K Q A
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRR-------STLSRRKTPMCEKCRKDSCQEA--- 53
Query: 143 GSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
L E +G++
Sbjct: 54 ----------------ALNKDEGNESGKKTS 68
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 69.9 bits (172), Expect = 1e-15
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ + K + C C + FT +++L +H R+HTGE+P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 3e-14
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ + + +C C + FT + +L +H + HTGEKP
Sbjct: 1 GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 3e-14
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ + + +C C + FT + +L +H + HTGEKP
Sbjct: 1 GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ + + +C C + FT + +L +H + HTGEKP
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 63.0 bits (154), Expect = 4e-13
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
S + + C C + F +S+L++H+R+HTG KP
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 62.6 bits (153), Expect = 4e-13
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+ + + C CG+ FT +++L +H R+H+GE+P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 1e-11
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ + K + C C + FT ++ +L H+RIHTGE+P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKS-------------------HLNQHQRIHTGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 57.2 bits (139), Expect = 3e-11
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ + K + C C + FT +++L +H R+HT
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT 36
Score = 43.7 bits (104), Expect = 2e-06
Identities = 6/30 (20%), Positives = 11/30 (36%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+ K + C C + F +L +H
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQH 31
Score = 30.6 bits (70), Expect = 0.10
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H+RIHTGE+P
Sbjct: 27 HLNQHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.27
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S + H+RIHTGE+P
Sbjct: 25 KSHLNQHQRIHTGEKPSGP 43
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 69.9 bits (172), Expect = 1e-15
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 370 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+GE PY C C KAF ++ L+ H R H GE S
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 64.5 bits (158), Expect = 1e-13
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 398 RVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE PY C CGK F ++ L+ H R H+GE
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 62.9 bits (154), Expect = 3e-13
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 89 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+GE P+ C C K F ++ L H +TH GE + G
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG 42
Score = 62.9 bits (154), Expect = 3e-13
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 164 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
+GE P+ C C K F ++ L H +TH GE + G
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG 42
Score = 62.9 bits (154), Expect = 3e-13
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 341 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
+GE P+ C C K F ++ L H +TH GE + G
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG 42
Score = 61.0 bits (149), Expect = 2e-12
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 426 RLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE PY C C K F ++ L H+R H G S
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 57.1 bits (139), Expect = 4e-11
Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 19/58 (32%)
Query: 118 KTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+GE PY C C KAF ++ L +H+R H GE
Sbjct: 3 SGSSGENPYECSECGKAFNRKD-------------------QLISHQRTHAGESGPSS 41
Score = 54.4 bits (132), Expect = 3e-10
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 193 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+GE PY C C KAF ++ L+ H R H
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHA 34
Score = 40.6 bits (96), Expect = 3e-05
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 453 ERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
+G PY C C KAF + L H+
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQ 30
Score = 31.7 bits (73), Expect = 0.031
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 336 NLGTHERIHTGERPFRC 352
L +H+R H GE
Sbjct: 25 QLISHQRTHAGESGPSS 41
Score = 30.9 bits (71), Expect = 0.056
Identities = 6/21 (28%), Positives = 10/21 (47%), Gaps = 3/21 (14%)
Query: 83 SRRS---THERIHTGERPFRC 100
+R+ +H+R H GE
Sbjct: 21 NRKDQLISHQRTHAGESGPSS 41
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 2e-15
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C +C KAF ++L++H VH+GERP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 69.5 bits (171), Expect = 2e-15
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C++CGK F ++LV+H+ +HSGERP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 67.9 bits (167), Expect = 7e-15
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C+VC K F +L +H H+GE+P
Sbjct: 1 GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 67.9 bits (167), Expect = 7e-15
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C+VC K F +L +H H+GE+P
Sbjct: 1 GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
TGE+P++C+VC K F +L +H H+GE+P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 65.2 bits (160), Expect = 6e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C+ C K F S+L +H VH+G +P
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 58.7 bits (143), Expect = 1e-11
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C +C KAF ++L H +H+GERP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLV-------------------QHHSVHSGERPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 54.8 bits (133), Expect = 2e-10
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C +C KAF ++L++H VH+
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS 36
Score = 47.9 bits (115), Expect = 8e-08
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C++C KAF + +L +H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31
Score = 32.9 bits (76), Expect = 0.014
Identities = 14/68 (20%), Positives = 18/68 (26%), Gaps = 39/68 (57%)
Query: 285 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIH 344
C+VC K F SS +L H +H
Sbjct: 15 CQVCGKAFRVSS---------------------------------------HLVQHHSVH 35
Query: 345 TGERPFRC 352
+GERP
Sbjct: 36 SGERPSGP 43
Score = 28.6 bits (65), Expect = 0.42
Identities = 14/74 (18%), Positives = 18/74 (24%), Gaps = 45/74 (60%)
Query: 27 CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPLERSRRS 86
C+VC K F SS +L
Sbjct: 15 CQVCGKAFRVSS-------------HLV-------------------------------- 29
Query: 87 THERIHTGERPFRC 100
H +H+GERP
Sbjct: 30 QHHSVHSGERPSGP 43
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 2e-15
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C KAF R++L H H+GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K F + +L H TH+GEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K F + +L H TH+GEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F +++L H HSGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K F + +L H TH+GEKP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 64.1 bits (157), Expect = 1e-13
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F +S+L H+ H+G KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 59.5 bits (145), Expect = 6e-12
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C KAF R+ +L H+ H+GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARS-------------------SLAIHQATHSGEKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 55.2 bits (134), Expect = 2e-10
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAF R++L H H+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS 36
Score = 46.8 bits (112), Expect = 2e-07
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
TG KPY C C KAF +L H+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQ 32
Score = 32.5 bits (75), Expect = 0.021
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H+ H+GE+P
Sbjct: 27 SLAIHQATHSGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.052
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 81 ERSRRSTHERIHTGERPFRC 100
RS + H+ H+GE+P
Sbjct: 24 ARSSLAIHQATHSGEKPSGP 43
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.4 bits (171), Expect = 2e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K FTQ +L +H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 69.4 bits (171), Expect = 2e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K FTQ +L +H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 69.0 bits (170), Expect = 2e-15
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K FTQ ++L++H +HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 9e-15
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K FTQ +L +H HTGEKP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK FTQ ++LV+H +H+GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 64.4 bits (158), Expect = 1e-13
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F Q S+L RH +HTG KP
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 58.6 bits (143), Expect = 1e-11
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C C K FTQ ++L H IHTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLV-------------------RHRGIHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 55.2 bits (134), Expect = 2e-10
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K FTQ ++L++H +HT
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT 36
Score = 46.7 bits (112), Expect = 2e-07
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K F Q +L +H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRH 31
Score = 32.1 bits (74), Expect = 0.030
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H IHTGE+P
Sbjct: 27 HLVRHRGIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.057
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S H IHTGE+P
Sbjct: 25 NSHLVRHRGIHTGEKPSGPS 44
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 2e-15
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TG K + C C KAFT+++ L H ++HTGE+P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 5e-15
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 86 STHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TG + F C C K FT++ L H K HTGEKP
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 8e-15
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TG + F C C K FT++ L H K HTGEKP
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 8e-15
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TG + F C C K FT++ L H K HTGEKP
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TG + + C CGK FT+++ L H ++H+GE+P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 64.5 bits (158), Expect = 1e-13
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+G + + C C K F ++S L H+++HTG KP
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 59.5 bits (145), Expect = 5e-12
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TG K + C C KAFT+++ L H++IHTGE+P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKS-------------------TLSMHQKIHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 55.2 bits (134), Expect = 2e-10
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TG K + C C KAFT+++ L H ++HT
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT 36
Score = 46.0 bits (110), Expect = 3e-07
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG K + C C KAF + L+ H
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMH 31
Score = 32.5 bits (75), Expect = 0.019
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H++IHTGE+P
Sbjct: 27 TLSMHQKIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.038
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
+S S H++IHTGE+P
Sbjct: 24 RKSTLSMHQKIHTGEKPSGPS 44
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 69.5 bits (171), Expect = 2e-15
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCG 412
+ +GEKP+ C C K F + H R H+GE+P G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 69.1 bits (170), Expect = 3e-15
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+PF+CE C K F + H ++H+GEKP
Sbjct: 1 GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 69.1 bits (170), Expect = 3e-15
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+PF+CE C K F + H ++H+GEKP
Sbjct: 1 GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GE+PF+CE C K F + H ++H+GEKP
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+P+ C+ CGK F + H R HSGE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+P+ C C K F S H+R H+G KP
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 58.3 bits (142), Expect = 1e-11
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ +GEKP+ C C K F + + +H+R H+GE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCY-------------------SHQRSHSGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 54.9 bits (133), Expect = 2e-10
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKP+ C C K F + H R H+
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS 36
Score = 44.1 bits (105), Expect = 1e-06
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KP+ C+ C K F H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31
Score = 32.1 bits (74), Expect = 0.024
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 336 NLGTHERIHTGERPFRCE 353
+H+R H+GE+P
Sbjct: 27 QCYSHQRSHSGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.086
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S+ +H+R H+GE+P
Sbjct: 25 NSQCYSHQRSHSGEKPSGPS 44
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.4 bits (171), Expect = 2e-15
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEKPY C C K FTQ ++L H R+HTGE+P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+P++C C K FTQ +L H + HTGEKP
Sbjct: 1 GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+P++C C K FTQ +L H + HTGEKP
Sbjct: 1 GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 7e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GE+P++C C K FTQ +L H + HTGEKP
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 67.1 bits (165), Expect = 1e-14
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+PY C CGK FTQ ++L H R+H+GE+P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 65.2 bits (160), Expect = 5e-14
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+PY C C K F Q S+L H R+HTG KP
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 59.0 bits (144), Expect = 8e-12
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ +GEKPY C C K FTQ ++L H RIHTGE+P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLT-------------------NHWRIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 2e-10
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKPY C C K FTQ ++L H R+HT
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT 36
Score = 47.1 bits (113), Expect = 1e-07
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KPY C C K F Q +LT H
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNH 31
Score = 32.5 bits (75), Expect = 0.020
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H RIHTGE+P
Sbjct: 27 HLTNHWRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.068
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 82 RSRRSTHERIHTGERPFRC 100
S + H RIHTGE+P
Sbjct: 25 NSHLTNHWRIHTGEKPSGP 43
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 2e-15
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ GEKPY C C K+F+ L +H HT E+P
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 65.6 bits (161), Expect = 3e-14
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ GE+P++C C K+F+ L +H THT EKP
Sbjct: 1 GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 65.6 bits (161), Expect = 3e-14
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ GE+P++C C K+F+ L +H THT EKP
Sbjct: 1 GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
GE+PY C CGK F+ L +H H+ E+P
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ GE+P++C C K+F+ L +H THT EKP
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 62.6 bits (153), Expect = 5e-13
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
GE+PY C C K+F L +H HT KP
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 57.2 bits (139), Expect = 4e-11
Identities = 15/61 (24%), Positives = 19/61 (31%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ GEKPY C C K+F+ L H HT E+P
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSY-------------------RLTQHWITHTREKPSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 54.9 bits (133), Expect = 2e-10
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GEKPY C C K+F+ L +H HT
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT 36
Score = 44.8 bits (107), Expect = 9e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
G KPY C C K+F+ + LT+H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQH 31
Score = 31.4 bits (72), Expect = 0.046
Identities = 6/17 (35%), Positives = 7/17 (41%)
Query: 336 NLGTHERIHTGERPFRC 352
L H HT E+P
Sbjct: 27 RLTQHWITHTREKPSGP 43
Score = 30.6 bits (70), Expect = 0.088
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 82 RSRRSTHERIHTGERPFRC 100
R + H HT E+P
Sbjct: 25 SYRLTQHWITHTREKPSGP 43
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 2e-15
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C KAF +NL H +HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 7e-15
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K F NL H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 7e-15
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K F NL H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 2e-14
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K F NL H HTGEKP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F +NL H +H+GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F SNL H+ +HTG KP
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 59.8 bits (146), Expect = 4e-12
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C C KAF + NL TH+ IHTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHS-------------------NLTTHQVIHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 55.6 bits (135), Expect = 1e-10
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAF +NL H +HT
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT 36
Score = 46.4 bits (111), Expect = 3e-07
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C KAF NLT H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH 31
Score = 33.6 bits (78), Expect = 0.007
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 336 NLGTHERIHTGERPFRCE 353
NL TH+ IHTGE+P
Sbjct: 27 NLTTHQVIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.038
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S +TH+ IHTGE+P
Sbjct: 25 HSNLTTHQVIHTGEKPSGPS 44
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 70.8 bits (173), Expect = 2e-15
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 343 IHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTGEKPY--------NCGMCDKAFTQRANL 393
I + + C +TF+ L H+ H G C K+F + L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 394 LKHIRVHTGERPYSC 408
+ HIRVHTGE+
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 66.1 bits (161), Expect = 1e-13
Identities = 19/75 (25%), Positives = 26/75 (34%), Gaps = 9/75 (12%)
Query: 399 VHTGERPYSCKLCGKRFTQQANLVKH-NRLHSGERPYHCRYC--------TKTFIQQSNL 449
+ + K C + F+ LV H H G + C K+F + L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 450 DRHERVHTGVKPYSC 464
H RVHTG K
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 58.1 bits (140), Expect = 7e-11
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 9/68 (13%)
Query: 166 IHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTGEKPY--------NCGMCDKAFTQRANL 216
I + + C +TF+ L H+ H G C K+F + L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 217 LKHIRVHT 224
+ HIRVHT
Sbjct: 79 VNHIRVHT 86
Score = 56.9 bits (137), Expect = 2e-10
Identities = 18/94 (19%), Positives = 27/94 (28%), Gaps = 28/94 (29%)
Query: 91 IHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTGEKPY--------NCGMCDKAFTQRANL 141
I + + C +TF+ L H+ H G C K+F + L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 142 WGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
H R+HTGE+
Sbjct: 79 V-------------------NHIRVHTGEKSGPS 93
Score = 46.1 bits (109), Expect = 1e-06
Identities = 12/48 (25%), Positives = 16/48 (33%), Gaps = 8/48 (16%)
Query: 89 ERIHTGERPFR--------CEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
H G C K+F + L H++ HTGEK
Sbjct: 46 TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 30.7 bits (69), Expect = 0.32
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 336 NLGTHERIHTGERPFRC 352
L H R+HTGE+
Sbjct: 77 KLVNHIRVHTGEKSGPS 93
Score = 29.9 bits (67), Expect = 0.50
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+ + H R+HTGE+
Sbjct: 75 KYKLVNHIRVHTGEKSGPS 93
Score = 29.9 bits (67), Expect = 0.55
Identities = 18/81 (22%), Positives = 25/81 (30%), Gaps = 14/81 (17%)
Query: 455 VHTGVKPYSCKICWKAFAQTGNLTKHELSAHGIGKPGVNKGTNTHNCEEKCSIPVLLCSK 514
+ K C + F+ L H H G N H C + C +
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ-----NNHVCYWE------ECPR 67
Query: 515 TGKILKKLPMKYHH---HSGE 532
GK K +H H+GE
Sbjct: 68 EGKSFKAKYKLVNHIRVHTGE 88
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 69.1 bits (170), Expect = 2e-15
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP C C KAF ++ L+ H R H ++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 65.3 bits (160), Expect = 4e-14
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P +C C K F + L H +TH +K
Sbjct: 1 GSSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 65.3 bits (160), Expect = 4e-14
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P +C C K F + L H +TH +K
Sbjct: 1 GSSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 63.3 bits (155), Expect = 3e-13
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P +C C K F + L H +TH +K
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 63.0 bits (154), Expect = 3e-13
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P C CGK F ++ L+ H R H ++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 61.8 bits (151), Expect = 9e-13
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P C C K F +S L H+R H K
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 58.0 bits (141), Expect = 2e-11
Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKP C C KAF ++ L H+R H ++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKS-------------------QLIMHQRTHVDDKHSGP 43
Score = 55.3 bits (134), Expect = 2e-10
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKP C C KAF ++ L+ H R H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV 36
Score = 41.4 bits (98), Expect = 1e-05
Identities = 11/30 (36%), Positives = 11/30 (36%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KP C C KAF L H
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMH 31
Score = 31.4 bits (72), Expect = 0.047
Identities = 4/17 (23%), Positives = 7/17 (41%)
Query: 336 NLGTHERIHTGERPFRC 352
L H+R H ++
Sbjct: 27 QLIMHQRTHVDDKHSGP 43
Score = 30.6 bits (70), Expect = 0.090
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S+ H+R H ++
Sbjct: 25 KSQLIMHQRTHVDDKHSGP 43
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.1 bits (170), Expect = 2e-15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C +C K+F ++L H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C+VC K+F +L H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C+VC K+F +L H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 8e-15
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C+VC K+F +L H + HTGEKP
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C +C K F ++L H R+H+GE+P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 64.5 bits (158), Expect = 1e-13
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K+F S+L H+R+HTG KP
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 1e-11
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C +C K+F + +L H+RIHTGE+P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGS-------------------SLTVHQRIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 2e-10
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C +C K+F ++L H R+HT
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT 36
Score = 47.1 bits (113), Expect = 1e-07
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C +C K+F +LT H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31
Score = 32.9 bits (76), Expect = 0.017
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H+RIHTGE+P
Sbjct: 27 SLTVHQRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.088
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 82 RSRRSTHERIHTGERPFRC 100
S + H+RIHTGE+P
Sbjct: 25 GSSLTVHQRIHTGEKPSGP 43
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 69.1 bits (170), Expect = 2e-15
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEKPY C C KAF ++ L+ H R H G S
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
G+ +GE+P+ C C K F + L H +TH G + G
Sbjct: 1 GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG 44
Score = 68.3 bits (168), Expect = 4e-15
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
G+ +GE+P+ C C K F + L H +TH G + G
Sbjct: 1 GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG 44
Score = 66.8 bits (164), Expect = 1e-14
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+ +GE+P+ C C K F + L H +TH G + G
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG 44
Score = 64.9 bits (159), Expect = 7e-14
Identities = 19/41 (46%), Positives = 21/41 (51%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+PY C C K FI +S L HER H GV S
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 64.1 bits (157), Expect = 1e-13
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+PY C CGK F ++ L+ H R H+G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 57.2 bits (139), Expect = 3e-11
Identities = 16/60 (26%), Positives = 20/60 (33%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ +GEKPY C C KAF ++ L HER H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKS-------------------LLIVHERTHAGVSGPSS 43
Score = 55.2 bits (134), Expect = 2e-10
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEKPY C C KAF ++ L+ H R H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA 36
Score = 47.9 bits (115), Expect = 8e-08
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
+G KPY C C KAF L HE
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHE 32
Score = 31.0 bits (71), Expect = 0.074
Identities = 6/17 (35%), Positives = 6/17 (35%)
Query: 336 NLGTHERIHTGERPFRC 352
L HER H G
Sbjct: 27 LLIVHERTHAGVSGPSS 43
Score = 29.4 bits (67), Expect = 0.22
Identities = 6/19 (31%), Positives = 7/19 (36%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S HER H G
Sbjct: 25 KSLLIVHERTHAGVSGPSS 43
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.1 bits (170), Expect = 2e-15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TG+KPY C C K FTQ ++L +H +HTGE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TG++P++C C K FTQ +L +H HTGEKP
Sbjct: 1 GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 3e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TG++P++C C K FTQ +L +H HTGEKP
Sbjct: 1 GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 67.5 bits (166), Expect = 8e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TG++P++C C K FTQ +L +H HTGEKP
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TG++PY C CGK FTQ ++L +H +H+GE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 64.8 bits (159), Expect = 6e-14
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+G++PY C C K F Q S+L RH +HTG KP
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 59.1 bits (144), Expect = 7e-12
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TG+KPY C C K FTQ + +L H IHTGE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNS-------------------HLARHRGIHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 55.2 bits (134), Expect = 2e-10
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TG+KPY C C K FTQ ++L +H +HT
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT 36
Score = 45.2 bits (108), Expect = 5e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K F Q +L +H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARH 31
Score = 32.5 bits (75), Expect = 0.019
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H IHTGE+P
Sbjct: 27 HLARHRGIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.033
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S + H IHTGE+P
Sbjct: 25 NSHLARHRGIHTGEKPSGPS 44
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 69.1 bits (170), Expect = 3e-15
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GE+PY C C K F + ++L++H++ H E+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GERP+ C C K F + +L +H+K H EK
Sbjct: 1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 68.3 bits (168), Expect = 4e-15
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GERP+ C C K F + +L +H+K H EK
Sbjct: 1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 67.9 bits (167), Expect = 5e-15
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GERPY C CGK F + ++L++H + H E+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 66.8 bits (164), Expect = 2e-14
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+GERP+ C C K F + +L +H+K H EK
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGERPY C C K F + S+L H + H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 56.8 bits (138), Expect = 4e-11
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 19/60 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ +GE+PY C C K F + + +L H + H E+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHS-------------------HLIEHLKRHFREKSSGP 43
Score = 54.1 bits (131), Expect = 4e-10
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GE+PY C C K F + ++L++H++ H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF 36
Score = 44.0 bits (105), Expect = 2e-06
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
+G +PY C C K F + +L +H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHL 32
Score = 32.1 bits (74), Expect = 0.027
Identities = 4/17 (23%), Positives = 7/17 (41%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H + H E+
Sbjct: 27 HLIEHLKRHFREKSSGP 43
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.1 bits (170), Expect = 3e-15
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TG KPY C C KAF+ ++L H +HTGE+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TG +P+ C C K F+ +L H HTGEKP
Sbjct: 1 GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TG +P+ C C K F+ +L H HTGEKP
Sbjct: 1 GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 3e-14
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TG +P+ C C K F+ +L H HTGEKP
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TG +PY C CGK F+ ++L H +H+GE+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 63.3 bits (155), Expect = 2e-13
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+G +PY C C K F S+L H+ +HTG KP
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 59.1 bits (144), Expect = 7e-12
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TG KPY C C KAF+ + +L TH+ IHTGE+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYS-------------------SLTTHQVIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 54.8 bits (133), Expect = 2e-10
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TG KPY C C KAF+ ++L H +HT
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT 36
Score = 47.5 bits (114), Expect = 9e-08
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TGVKPY C C KAF+ +LT H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTH 31
Score = 33.3 bits (77), Expect = 0.011
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L TH+ IHTGE+P
Sbjct: 27 SLTTHQVIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.036
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
S +TH+ IHTGE+P
Sbjct: 24 VYSSLTTHQVIHTGEKPSGPS 44
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 68.7 bits (169), Expect = 3e-15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEK Y C C K F++ + L +H ++HTGE+P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 67.2 bits (165), Expect = 1e-14
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+ Y C CGK F++ + L +H ++H+GE+P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 2e-14
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+ ++C C K F++ L +H K HTGEKP
Sbjct: 1 GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 66.8 bits (164), Expect = 2e-14
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+ ++C C K F++ L +H K HTGEKP
Sbjct: 1 GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 66.0 bits (162), Expect = 3e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+ ++C C K F++ L +H K HTGEKP
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 65.2 bits (160), Expect = 5e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+ Y C C K F + S L +H+++HTG KP
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 59.1 bits (144), Expect = 9e-12
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEK Y C C K F++ + L H++IHTGE+P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNS-------------------QLSQHQKIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 54.4 bits (132), Expect = 3e-10
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEK Y C C K F++ + L +H ++HT
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT 36
Score = 47.1 bits (113), Expect = 1e-07
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG K Y C C K F++ L++H
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQH 31
Score = 32.9 bits (76), Expect = 0.014
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H++IHTGE+P
Sbjct: 27 QLSQHQKIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.037
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S+ S H++IHTGE+P
Sbjct: 25 NSQLSQHQKIHTGEKPSGPS 44
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 3e-15
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GE+P+ C C K F +R++L H+R+H+ E+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GERPF+C C K F ++ +L H++ H+ EK
Sbjct: 1 GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 67.6 bits (166), Expect = 8e-15
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GERPF+C C K F ++ +L H++ H+ EK
Sbjct: 1 GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 65.2 bits (160), Expect = 4e-14
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ +GERPF+C C K F ++ +L H++ H+ EK
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 65.2 bits (160), Expect = 5e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GERP+ C CGK F ++++L H RLHS E+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 62.9 bits (154), Expect = 3e-13
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGERP+ C C K F ++S+L H R+H+ K
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 58.7 bits (143), Expect = 1e-11
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ +GE+P+ C C K F +R++L H R+H+ E+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLA-------------------GHLRLHSREKSSG 42
Query: 175 C 175
Sbjct: 43 P 43
Score = 54.8 bits (133), Expect = 2e-10
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GE+P+ C C K F +R++L H+R+H+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS 36
Score = 42.5 bits (101), Expect = 6e-06
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G +P+ C C K F + +L H
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGH 31
Score = 32.1 bits (74), Expect = 0.031
Identities = 5/17 (29%), Positives = 9/17 (52%)
Query: 336 NLGTHERIHTGERPFRC 352
+L H R+H+ E+
Sbjct: 27 HLAGHLRLHSREKSSGP 43
Score = 31.4 bits (72), Expect = 0.059
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 82 RSRRSTHERIHTGERPFRC 100
RS + H R+H+ E+
Sbjct: 25 RSHLAGHLRLHSREKSSGP 43
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 68.5 bits (168), Expect = 3e-15
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYS 407
+ GE PY CG C K+FTQR +L H R + P S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 62.3 bits (152), Expect = 5e-13
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPY 434
GE PY C CGK FTQ+ +L H R S P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 60.0 bits (146), Expect = 4e-12
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 126
GE P+ C C K+FTQ+ +L H ++ + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 60.0 bits (146), Expect = 4e-12
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 163 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 201
GE P+ C C K+FTQ+ +L H ++ + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 60.0 bits (146), Expect = 4e-12
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 340 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPY 378
GE P+ C C K+FTQ+ +L H ++ + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 58.8 bits (143), Expect = 8e-12
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYS 463
+ GE PY C C K+F Q+ +L H+R + P S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 57.7 bits (140), Expect = 3e-11
Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 19/58 (32%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
+ GE PY CG C K+FTQR +L H+R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRG-------------------SLAVHQRSCSQSGPS 40
Score = 56.9 bits (138), Expect = 4e-11
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GE PY CG C K+FTQR +L H R +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35
Score = 41.1 bits (97), Expect = 1e-05
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
G PY C C K+F Q G+L H+
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQ 31
Score = 30.7 bits (70), Expect = 0.092
Identities = 10/68 (14%), Positives = 16/68 (23%), Gaps = 39/68 (57%)
Query: 283 FVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHER 342
++C C K+FTQ +L H+R
Sbjct: 12 YLCGQCGKSFTQRG---------------------------------------SLAVHQR 32
Query: 343 IHTGERPF 350
+ P
Sbjct: 33 SCSQSGPS 40
Score = 28.4 bits (64), Expect = 0.49
Identities = 4/18 (22%), Positives = 8/18 (44%)
Query: 81 ERSRRSTHERIHTGERPF 98
+R + H+R + P
Sbjct: 23 QRGSLAVHQRSCSQSGPS 40
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 4e-15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K F L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 68.7 bits (169), Expect = 4e-15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K F L +H + HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 6e-15
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K F + L +H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K F L +H + HTGEKP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 65.2 bits (160), Expect = 6e-14
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F + L +H R+H+GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 64.1 bits (157), Expect = 1e-13
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F S L RH+R+HTG KP
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 2e-11
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C C K F + L H+RIHTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNS-------------------YLSRHQRIHTGEKPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 54.1 bits (131), Expect = 4e-10
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K F + L +H R+HT
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT 36
Score = 46.0 bits (110), Expect = 3e-07
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K F L++H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRH 31
Score = 32.9 bits (76), Expect = 0.015
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H+RIHTGE+P
Sbjct: 27 YLSRHQRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.042
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S S H+RIHTGE+P
Sbjct: 25 NSYLSRHQRIHTGEKPSGPS 44
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.4 bits (168), Expect = 4e-15
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C KAF ++ +H R+HTG+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K F + +H + HTG++P
Sbjct: 1 GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 66.8 bits (164), Expect = 1e-14
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K F + +H + HTG++P
Sbjct: 1 GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 66.4 bits (163), Expect = 2e-14
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F ++ +H RLH+G+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 65.7 bits (161), Expect = 4e-14
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K F + +H + HTG++P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 63.4 bits (155), Expect = 2e-13
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F S+ +H+R+HTG +P
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 57.6 bits (140), Expect = 2e-11
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ TGEKPY C C KAF + + H+R+HTG+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNS-------------------SCTQHQRLHTGQRPSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 53.7 bits (130), Expect = 5e-10
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C KAF ++ +H R+HT
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT 36
Score = 46.0 bits (110), Expect = 3e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
TG KPY C C KAF + T+H+
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQ 32
Score = 32.6 bits (75), Expect = 0.016
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
+ H+R+HTG+RP
Sbjct: 27 SCTQHQRLHTGQRPSGPS 44
Score = 32.6 bits (75), Expect = 0.022
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 81 ERSRRSTHERIHTGERPFRCE 101
+ S + H+R+HTG+RP
Sbjct: 24 DNSSCTQHQRLHTGQRPSGPS 44
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.3 bits (168), Expect = 4e-15
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKPY C C K F + ++L +H +HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 7e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+P++C C K F + +L +H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 67.9 bits (167), Expect = 7e-15
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+P++C C K F + +L +H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 66.7 bits (164), Expect = 1e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+P++C C K F + +L +H HTGEKP
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 65.6 bits (161), Expect = 4e-14
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+PY C CGK F + ++L +H +H+GE+P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 63.7 bits (156), Expect = 2e-13
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+PY C C K F + S+L RH+ +HTG KP
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 58.6 bits (143), Expect = 1e-11
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 19/62 (30%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ TGEKPY C C K F + ++L H+ IHTGE+P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLA-------------------RHQLIHTGEKPSG 42
Query: 175 CE 176
Sbjct: 43 PS 44
Score = 54.4 bits (132), Expect = 3e-10
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ TGEKPY C C K F + ++L +H +HT
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT 36
Score = 46.7 bits (112), Expect = 2e-07
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
TG KPY C C K F + +L +H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARH 31
Score = 32.1 bits (74), Expect = 0.025
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 336 NLGTHERIHTGERPFRCE 353
+L H+ IHTGE+P
Sbjct: 27 HLARHQLIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.038
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 82 RSRRSTHERIHTGERPFRCE 101
S + H+ IHTGE+P
Sbjct: 25 NSHLARHQLIHTGEKPSGPS 44
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 67.9 bits (167), Expect = 6e-15
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 370 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+GEKP+ C C+KAF+ ++ LL H + H E+P
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 62.9 bits (154), Expect = 3e-13
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 398 RVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+P+ C C K F+ ++ L+ H + H+ E+P
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 60.6 bits (148), Expect = 2e-12
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 89 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+GE+PF C C K F+ + L H +TH EKP
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 60.6 bits (148), Expect = 2e-12
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 164 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
+GE+PF C C K F+ + L H +TH EKP
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 60.6 bits (148), Expect = 2e-12
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 341 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
+GE+PF C C K F+ + L H +TH EKP
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 59.9 bits (146), Expect = 4e-12
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 428 HSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+P+ C C K F +S L H++ H KP
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 56.4 bits (137), Expect = 7e-11
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 19/58 (32%)
Query: 118 KTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+GEKP+ C C+KAF+ ++ L H++ H E+P
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKS-------------------YLLVHQQTHAEEKPSGP 41
Score = 52.5 bits (127), Expect = 1e-09
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 193 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+GEKP+ C C+KAF+ ++ LL H + H
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA 34
Score = 39.8 bits (94), Expect = 5e-05
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 453 ERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G KP+ C C KAF+ L H
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVH 29
Score = 31.7 bits (73), Expect = 0.033
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 336 NLGTHERIHTGERPFRC 352
L H++ H E+P
Sbjct: 25 YLLVHQQTHAEEKPSGP 41
Score = 31.0 bits (71), Expect = 0.065
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 82 RSRRSTHERIHTGERPFRC 100
+S H++ H E+P
Sbjct: 23 KSYLLVHQQTHAEEKPSGP 41
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 68.2 bits (167), Expect = 9e-15
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 390 RANLLKHIRVHTGERPYSCKL--CGKRFTQQANLVKHNRLHSGERPYHCRY--CTKTFIQ 445
+ + R + C CGK + + ++L H R H+GE+P+ C + C + F +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 446 QSNLDRHERVH 456
L RH R H
Sbjct: 62 SDELSRHRRTH 72
Score = 67.8 bits (166), Expect = 1e-14
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 367 KHMKTHTGEKPYNCGM--CDKAFTQRANLLKHIRVHTGERPYSCKL--CGKRFTQQANLV 422
+ + + C C K + + ++L H R HTGE+P+SC C +RF + L
Sbjct: 7 GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELS 66
Query: 423 KHNRLH 428
+H R H
Sbjct: 67 RHRRTH 72
Score = 64.3 bits (157), Expect = 2e-13
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 160 LGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRAN 215
+ + R C C KT+ + +L H +THTGEKP++C C++ F +
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 216 LLKHIRVH 223
L +H R H
Sbjct: 65 LSRHRRTH 72
Score = 64.3 bits (157), Expect = 2e-13
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 337 LGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQRAN 392
+ + R C C KT+ + +L H +THTGEKP++C C++ F +
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 393 LLKHIRVH 400
L +H R H
Sbjct: 65 LSRHRRTH 72
Score = 61.2 bits (149), Expect = 3e-12
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 419 ANLVKHNRLHSGERPYHCRY--CTKTFIQQSNLDRHERVHTGVKPYSCKI--CWKAFAQT 474
+ S R + C + C KT+ + S+L H R HTG KP+SC C + FA++
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 475 GNLTKH 480
L++H
Sbjct: 63 DELSRH 68
Score = 57.0 bits (138), Expect = 7e-11
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 82 RSRRSTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEKPYNCGM--CDKAFTQ 137
S S + + R C C KT+ + +L H +THTGEKP++C C++ F +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 138 RANL 141
L
Sbjct: 62 SDEL 65
Score = 54.3 bits (131), Expect = 6e-10
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 23/85 (27%)
Query: 115 KHMKTHTGEKPYNCGM--CDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERP 172
+ + + C C K + + ++L H R HTGE+P
Sbjct: 7 GPQIDSSRIRSHICSHPGCGKTYFKSSHL-------------------KAHTRTHTGEKP 47
Query: 173 FRCEV--CMKTFTQQPNLWKHMKTH 195
F C C + F + L +H +TH
Sbjct: 48 FSCSWKGCERRFARSDELSRHRRTH 72
Score = 45.5 bits (108), Expect = 1e-06
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 336 NLGTHERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTH 372
+L H R HTGE+PF C C + F + L +H +TH
Sbjct: 34 HLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 44.7 bits (106), Expect = 2e-06
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 88 HERIHTGERPFRCEV--CMKTFTQQPNLWKHMKTH 120
H R HTGE+PF C C + F + L +H +TH
Sbjct: 38 HTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 37.4 bits (87), Expect = 7e-04
Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 190 KHMKTHTGEKPYNCGM--CDKAFTQRANLLKHIRVHT 224
+ + + C C K + + ++L H R HT
Sbjct: 7 GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT 43
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 66.1 bits (162), Expect = 2e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ T K YNC C KAFT+ +L +H ++HT + S
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 60.7 bits (148), Expect = 2e-12
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
T + Y+C CGK FT+ +L +H ++H+ +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 60.7 bits (148), Expect = 2e-12
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
G+ T + + C C K FT+ +L +H K HT + + G
Sbjct: 1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44
Score = 60.7 bits (148), Expect = 2e-12
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
G+ T + + C C K FT+ +L +H K HT + + G
Sbjct: 1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44
Score = 59.5 bits (145), Expect = 6e-12
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
T + + C C K FT+ +L +H K HT + + G
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44
Score = 57.6 bits (140), Expect = 2e-11
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ T K YNC C KAFT+ +L +H ++HT
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36
Score = 56.4 bits (137), Expect = 6e-11
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
+ + Y+C C K F + +L RH+++HT S
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 54.5 bits (132), Expect = 3e-10
Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 19/61 (31%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
+ T K YNC C KAFT+ +L H++IHT +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIF-------------------HLTRHQKIHTRKSGPS 42
Query: 175 C 175
Sbjct: 43 S 43
Score = 46.4 bits (111), Expect = 2e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
T K Y+C C KAF + +LT+H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRH 31
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 66.1 bits (162), Expect = 3e-14
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIR-VHTGERPYSC 408
+ TG+KPY C C KAF Q +L++H R HTGE+P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 64.9 bits (159), Expect = 6e-14
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTGEKPYNC 203
G+ TG++P+ C C K F Q +L +H HTGEKP
Sbjct: 1 GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 64.9 bits (159), Expect = 6e-14
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTGEKPYNC 380
G+ TG++P+ C C K F Q +L +H HTGEKP
Sbjct: 1 GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 64.9 bits (159), Expect = 8e-14
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRL-HSGERPYHC 436
TG++PY C CGK F Q +L++H R H+GE+P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 63.7 bits (156), Expect = 2e-13
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTGEKPYNC 128
+ TG++P+ C C K F Q +L +H HTGEKP
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 62.2 bits (152), Expect = 7e-13
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHER-VHTGVKPYSC 464
+G++PY C C K FIQ ++L RH R HTG KP
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 53.7 bits (130), Expect = 5e-10
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 20/61 (32%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHER-IHTGERPFR 174
+ TG+KPY C C KAF Q +L H R HTGE+P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLI-------------------RHWRYYHTGEKPSG 43
Query: 175 C 175
Sbjct: 44 P 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIR-VHT 224
+ TG+KPY C C KAF Q +L++H R HT
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT 37
Score = 47.2 bits (113), Expect = 1e-07
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHELSAH 485
TG KPY C C KAF Q +L +H H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 65.3 bits (160), Expect = 4e-14
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 370 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYS 407
+G++ Y C C K+F Q+ +L H R+HTG P S
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 60.7 bits (148), Expect = 2e-12
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 398 RVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPY 434
+G+R Y C+ CGK F Q+ +L H R+H+G P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 58.0 bits (141), Expect = 2e-11
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 428 HSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYS 463
SG+R Y C+ C K+F Q+ +L HER+HTG P S
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 55.7 bits (135), Expect = 1e-10
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 89 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYN 127
+G+R + C+ C K+F Q+ +L H + HTG P +
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 55.7 bits (135), Expect = 1e-10
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 164 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYN 202
+G+R + C+ C K+F Q+ +L H + HTG P +
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 55.7 bits (135), Expect = 1e-10
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 341 ERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYN 379
+G+R + C+ C K+F Q+ +L H + HTG P +
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 54.5 bits (132), Expect = 3e-10
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 19/56 (33%)
Query: 118 KTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
+G++ Y C C K+F Q+ +L HERIHTG P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKG-------------------SLTLHERIHTGSGPS 39
Score = 53.0 bits (128), Expect = 9e-10
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 193 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+G++ Y C C K+F Q+ +L H R+HT
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHT 34
Score = 41.4 bits (98), Expect = 1e-05
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 453 ERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
+G + Y C+ C K+F Q G+LT HE
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHE 30
Score = 30.2 bits (69), Expect = 0.100
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 336 NLGTHERIHTGERPF 350
+L HERIHTG P
Sbjct: 25 SLTLHERIHTGSGPS 39
Score = 29.1 bits (66), Expect = 0.28
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 81 ERSRRSTHERIHTGERPF 98
++ + HERIHTG P
Sbjct: 22 QKGSLTLHERIHTGSGPS 39
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 64.1 bits (157), Expect = 1e-13
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+ +GEK + C C K F + L H RVH GE+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 61.5 bits (150), Expect = 1e-12
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ +GE+ C+ C K F L H + H GEK
Sbjct: 1 GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 61.5 bits (150), Expect = 1e-12
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ +GE+ C+ C K F L H + H GEK
Sbjct: 1 GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 61.1 bits (149), Expect = 1e-12
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+ + C C K F S L H+RVH G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 59.5 bits (145), Expect = 6e-12
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+GE+ C+ C K F L H + H GEK
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 58.8 bits (143), Expect = 1e-11
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+ ++C CGK F + L H R+H GE+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 53.4 bits (129), Expect = 7e-10
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ +GEK + C C K F + L H RVH
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36
Score = 52.2 bits (126), Expect = 2e-09
Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 19/61 (31%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+ +GEK + C C K F + L H+R+H GE+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYIS-------------------ALRIHQRVHMGEKCSGP 43
Query: 176 E 176
Sbjct: 44 S 44
Score = 41.4 bits (98), Expect = 1e-05
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
+G K ++C C K F L H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIH 31
Score = 27.6 bits (62), Expect = 1.3
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H+R+H GE+
Sbjct: 27 ALRIHQRVHMGEKCSGPS 44
Score = 26.0 bits (58), Expect = 4.8
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 88 HERIHTGERPFRCE 101
H+R+H GE+
Sbjct: 31 HQRVHMGEKCSGPS 44
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 61.6 bits (150), Expect = 9e-13
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 370 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSC 408
+GEKPY+C C + F+ L++H ++HT + S
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 56.2 bits (136), Expect = 7e-11
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 398 RVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHC 436
+GE+PYSC C + F+ LV+H ++H+ +
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 54.3 bits (131), Expect = 3e-10
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 90 RIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+GE+P+ C C +TF+ L +H K HT + + G
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG 42
Score = 54.3 bits (131), Expect = 3e-10
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 165 RIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
+GE+P+ C C +TF+ L +H K HT + + G
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG 42
Score = 54.3 bits (131), Expect = 3e-10
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 342 RIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
+GE+P+ C C +TF+ L +H K HT + + G
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG 42
Score = 53.1 bits (128), Expect = 9e-10
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 428 HSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SGE+PY C C +TF + L +H+++HT S
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 52.3 bits (126), Expect = 2e-09
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 193 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+GEKPY+C C + F+ L++H ++HT
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHT 34
Score = 47.7 bits (114), Expect = 6e-08
Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 19/58 (32%)
Query: 118 KTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRC 175
+GEKPY+C C + F+ L H+++HT +
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLV-------------------QHQKMHTVKSGPSS 41
Score = 36.9 bits (86), Expect = 5e-04
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 454 RVHTGVKPYSCKICWKAFAQTGNLTKHE 481
+G KPYSC C + F+ L +H+
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQ 30
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 61.6 bits (150), Expect = 1e-12
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 161 GTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNC 203
G+ TGE+PF C C F++ L +H ++H+G KP
Sbjct: 1 GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 61.6 bits (150), Expect = 1e-12
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 338 GTHERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
G+ TGE+PF C C F++ L +H ++H+G KP
Sbjct: 1 GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 61.6 bits (150), Expect = 1e-12
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 396 HIRVHTGERPYSCK--LCGKRFTQQANLVKHNRLHSGERPYHC 436
TGE+P++C CG RF++ L +H R HSG +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 59.6 bits (145), Expect = 5e-12
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 87 THERIHTGERPFRC--EVCMKTFTQQPNLWKHMKTHTGEKPYNC 128
+ TGE+PF C C F++ L +H ++H+G KP
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 59.6 bits (145), Expect = 5e-12
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 424 HNRLHSGERPYHCRY--CTKTFIQQSNLDRHERVHTGVKPYSC 464
+GE+P+ C + C F + L RH R H+GVKP
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 58.9 bits (143), Expect = 9e-12
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 368 HMKTHTGEKPYNCG--MCDKAFTQRANLLKHIRVHTGERPYSC 408
+ TGEKP+ C C F++ L +H R H+G +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 49.6 bits (119), Expect = 2e-08
Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 21/63 (33%)
Query: 116 HMKTHTGEKPYNCG--MCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
+ TGEKP+ C C F++ L H R H+G +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDEL-------------------SRHRRSHSGVKPS 43
Query: 174 RCE 176
Sbjct: 44 GPS 46
Score = 46.1 bits (110), Expect = 3e-07
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 191 HMKTHTGEKPYNCG--MCDKAFTQRANLLKHIRVHT 224
+ TGEKP+ C C F++ L +H R H+
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS 38
Score = 36.1 bits (84), Expect = 0.001
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 452 HERVHTGVKPYSCK--ICWKAFAQTGNLTKH 480
TG KP++C C F+++ L++H
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRH 33
Score = 32.7 bits (75), Expect = 0.019
Identities = 6/18 (33%), Positives = 8/18 (44%)
Query: 336 NLGTHERIHTGERPFRCE 353
L H R H+G +P
Sbjct: 29 ELSRHRRSHSGVKPSGPS 46
Score = 30.7 bits (70), Expect = 0.089
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 86 STHERIHTGERPFRCE 101
S H R H+G +P
Sbjct: 31 SRHRRSHSGVKPSGPS 46
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 61.7 bits (149), Expect = 2e-12
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 406 YSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVK 460
Y C+ CG R + + L KH R H+ RPYHC YC +F + NL +H + K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 60.5 bits (146), Expect = 3e-12
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 350 FRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGER 404
+ CE C + L KH++THT +PY+C C+ +F + NL KH++ +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 60.5 bits (146), Expect = 4e-12
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 378 YNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGER 432
Y C C + + L KHIR HT RPY C C F + NL KH + + +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 56.3 bits (135), Expect = 1e-10
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 173 FRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ CE C + L KH++THT +PY+C C+ +F + NL KH++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 50.5 bits (120), Expect = 1e-08
Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 19/74 (25%)
Query: 126 YNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQ 185
Y C C + + L H R HT RP+ C C +F +
Sbjct: 2 YICEECGIRXKKPSML-------------------KKHIRTHTDVRPYHCTYCNFSFKTK 42
Query: 186 PNLWKHMKTHTGEK 199
NL KHMK+ K
Sbjct: 43 GNLTKHMKSKAHSK 56
Score = 50.1 bits (119), Expect = 2e-08
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 81 ERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 124
+ S H R HT RP+ C C +F + NL KHMK+ K
Sbjct: 13 KPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 50.1 bits (119), Expect = 2e-08
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 336 NLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
L H R HT RP+ C C +F + NL KHMK+ K
Sbjct: 16 MLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 48.9 bits (116), Expect = 4e-08
Identities = 22/53 (41%), Positives = 26/53 (49%)
Query: 434 YHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKHELSAHG 486
Y C C + S L +H R HT V+PY C C +F GNLTKH S
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 48.2 bits (114), Expect = 7e-08
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 19/74 (25%)
Query: 98 FRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFL 157
+ CE C + L KH++THT +PY+C C+ +F +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKG------------------ 43
Query: 158 VNLGTHERIHTGER 171
NL H + +
Sbjct: 44 -NLTKHMKSKAHSK 56
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 57.2 bits (138), Expect = 3e-11
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYS 407
+ GE P+ C CD+ FTQR L++H R H + S
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS 42
Score = 52.6 bits (126), Expect = 1e-09
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 190 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ GE P+ C CD+ FTQR L++H R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36
Score = 51.4 bits (123), Expect = 4e-09
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
G+ GE PF+C C + FTQ+ L +H +TH + + G
Sbjct: 1 GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG 44
Score = 51.4 bits (123), Expect = 4e-09
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
G+ GE PF+C C + FTQ+ L +H +TH + + G
Sbjct: 1 GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG 44
Score = 49.5 bits (118), Expect = 2e-08
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 395 KHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERP 433
GE P+ C C + FTQ+ LV+H R H+ +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 49.5 bits (118), Expect = 2e-08
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 87 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+ GE PF+C C + FTQ+ L +H +TH + + G
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG 44
Score = 47.5 bits (113), Expect = 1e-07
Identities = 15/58 (25%), Positives = 19/58 (32%), Gaps = 19/58 (32%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERP 172
+ GE P+ C CD+ FTQR L HER H +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLV-------------------QHERTHARKSG 40
Score = 47.2 bits (112), Expect = 1e-07
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 423 KHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYS 463
+GE P+ C C + F Q++ L +HER H S
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS 42
Score = 37.9 bits (88), Expect = 3e-04
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 451 RHERVHTGVKPYSCKICWKAFAQTGNLTKHE 481
G P+ C C + F Q L +HE
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHE 32
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 58.4 bits (140), Expect = 1e-10
Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 6/107 (5%)
Query: 322 RNISGWLEELPLLVNLGTHERIHTGERPFRCEV----CMKTFTQQPNLWKHMKTHTGEKP 377
N G + L H+ +R R V + + +
Sbjct: 15 SNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQ 74
Query: 378 YNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKH 424
+ C +C F+ +L +HIR E C +C K FT + + H
Sbjct: 75 FVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119
Score = 55.7 bits (133), Expect = 9e-10
Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 6/96 (6%)
Query: 396 HIRVHTGERPYSC----KLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDR 451
H +R + + +++ + + C C F +L +
Sbjct: 33 HQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQ 92
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKHELSAHGI 487
H R C +C K F T + H H I
Sbjct: 93 HIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 54.9 bits (131), Expect = 2e-09
Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 4/110 (3%)
Query: 350 FRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCK 409
V ++ + L K + + ++ L + + C
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLIRAIVKTL-IHNPQLLDESSYLYRLLASKAISQFVCP 78
Query: 410 LCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRH-ERVHTG 458
LC F+ +L +H R E C C K F + H + H
Sbjct: 79 LCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 49.2 bits (116), Expect = 2e-07
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 163 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIR 221
F C +C+ F+ +L +H++ E C +C K FT + L H+
Sbjct: 65 RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVC 121
Score = 44.5 bits (104), Expect = 7e-06
Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 3/102 (2%)
Query: 41 HKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLPL-ERSRRSTHERIHTGERPFR 99
HKG+ ++ L ++ + + + + N L + S F
Sbjct: 17 HKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFV 76
Query: 100 CEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 141
C +C+ F+ +L +H++ E C +C K FT +
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA 116
Score = 43.4 bits (101), Expect = 2e-05
Identities = 21/117 (17%), Positives = 32/117 (27%), Gaps = 26/117 (22%)
Query: 86 STHERIHTGERPFRCEV----CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANL 141
H+ +R R V + + + + C +C F+
Sbjct: 31 RYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSS--- 87
Query: 142 WGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTG 197
V+L H R E C VC K FT + H+ K H
Sbjct: 88 ----------------VSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 39.5 bits (91), Expect = 4e-04
Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Query: 163 HERIHTGERPFRCEV----CMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLK 218
H+ +R R V + + + + C +C F+ +L +
Sbjct: 33 HQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQ 92
Query: 219 HIRVHTE 225
HIR
Sbjct: 93 HIRYTEH 99
Score = 28.7 bits (63), Expect = 2.3
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 82 RSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHM-KTHTG 122
S S + I E C VC K FT + H+ K H
Sbjct: 85 SSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI 126
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 52.6 bits (126), Expect = 2e-09
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 161 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMC 206
G+ + CE+C K F +L +H +H+GEKPY+ G
Sbjct: 1 GSSGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 52.6 bits (126), Expect = 2e-09
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 338 GTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMC 383
G+ + CE+C K F +L +H +H+GEKPY+ G
Sbjct: 1 GSSGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 52.2 bits (125), Expect = 2e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 370 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLC 411
+ K C +C K F +L +H H+GE+PYS
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 51.1 bits (122), Expect = 6e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 90 RIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMC 131
+ CE+C K F +L +H +H+GEKPY+ G
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 51.1 bits (122), Expect = 6e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 426 RLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSCKIC 467
+ C C K F +L+RH+ H+G KPYS
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 48.4 bits (115), Expect = 6e-08
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 398 RVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCT 440
+ +C++CGK F +L +H HSGE+PY +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 39.2 bits (91), Expect = 9e-05
Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 19/61 (31%)
Query: 118 KTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEV 177
+ K C +C K F +L H+ H+GE+P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHL-------------------NRHKLSHSGEKPYSSGP 45
Query: 178 C 178
Sbjct: 46 S 46
Score = 36.5 bits (84), Expect = 0.001
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 193 KTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ K C +C K F +L +H H+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHS 36
Score = 31.1 bits (70), Expect = 0.075
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 454 RVHTGVKPYSCKICWKAFAQTGNLTKHELS 483
K +C+IC K F +L +H+LS
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLS 34
Score = 29.9 bits (67), Expect = 0.17
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 336 NLGTHERIHTGERPFRCEVC 355
+L H+ H+GE+P+
Sbjct: 27 HLNRHKLSHSGEKPYSSGPS 46
Score = 28.4 bits (63), Expect = 0.69
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 88 HERIHTGERPFRCEVC 103
H+ H+GE+P+
Sbjct: 31 HKLSHSGEKPYSSGPS 46
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 50.0 bits (120), Expect = 1e-08
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 88 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTH 120
R TG +PF+C C ++F++ +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 50.0 bits (120), Expect = 1e-08
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 163 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTH 195
R TG +PF+C C ++F++ +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 50.0 bits (120), Expect = 1e-08
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 340 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKTH 372
R TG +PF+C C ++F++ +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 46.2 bits (110), Expect = 2e-07
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 191 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVH 223
+ TG KP+ C CD++F++ +L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 46.2 bits (110), Expect = 2e-07
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 368 HMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVH 400
+ TG KP+ C CD++F++ +L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 45.8 bits (109), Expect = 4e-07
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 396 HIRVHTGERPYSCKLCGKRFTQQANLVKHNRLH 428
R TG +P+ C C + F++ +L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 41.6 bits (98), Expect = 1e-05
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 424 HNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGV 459
R +G +P+ C C ++F + +L H + H V
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 41.2 bits (97), Expect = 1e-05
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 452 HERVHTGVKPYSCKICWKAFAQTGNLTKH 480
R TG+KP+ C C ++F+++ +L H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALH 30
Score = 36.9 bits (86), Expect = 5e-04
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 116 HMKTHTGEKPYNCGMCDKAFTQ 137
+ TG KP+ C CD++F++
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSR 23
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 50.7 bits (120), Expect = 3e-08
Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNR 426
++ Y C +C+ + H R+ C C RF +H
Sbjct: 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-E 62
Query: 427 LHSGERPYHCRYCTKTFIQQSNLDRHE-RVHT 457
+ C C +TF ++ RH+ VH
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 50.7 bits (120), Expect = 4e-08
Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 402 GERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKP 461
+ Y C+LC + + H RL C YC+ F HE K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKK 69
Query: 462 YSCKICWKAFAQTGNLTKHELSAHG 486
+C C + F + ++ +H++ H
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 44.1 bits (103), Expect = 8e-06
Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Query: 346 GERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERP 405
+ ++C +C + H + C C F +H +
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 406 YSCKLCGKRFTQQANLVKH 424
+C C + F ++ +H
Sbjct: 70 LTCLECMRTFKSSFSIWRH 88
Score = 40.7 bits (94), Expect = 1e-04
Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 23/113 (20%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGERPFR 174
++ Y C +C+ + L+ G+HER+
Sbjct: 6 SGASPVENKEVYQCRLCNAKLSS-------------------LLEQGSHERLC--RNAAV 44
Query: 175 CEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKH-IRVHTEN 226
C C F P L + ++ K C C + F ++ +H + VH +N
Sbjct: 45 CPYCSLRFFS-PELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 40.3 bits (93), Expect = 1e-04
Identities = 16/112 (14%), Positives = 28/112 (25%), Gaps = 22/112 (19%)
Query: 83 SRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLW 142
S S+ + ++C +C + H + C C F
Sbjct: 2 SSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPE--- 56
Query: 143 GSWVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKT 194
L + C CM+TF ++W+H
Sbjct: 57 -----------------LKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 37.2 bits (85), Expect = 0.002
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 330 ELPLLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQ 389
+L L+ G+HER+ C C F P L + ++ K C C + F
Sbjct: 25 KLSSLLEQGSHERLC--RNAAVCPYCSLRFFS-PELKQEHESKCEYKKLTCLECMRTFKS 81
Query: 390 RANLLKH-IRVHT 401
++ +H + VH
Sbjct: 82 SFSIWRHQVEVHN 94
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 42.8 bits (100), Expect = 4e-06
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 195 HTGEKPYNCGMCDKAFTQRANLLKHIRVHTENL 227
+G++P+ C +C AFT +AN +H++VHT+ L
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL 34
Score = 40.9 bits (95), Expect = 2e-05
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 372 HTGEKPYNCGMCDKAFTQRANLLKHIRVHT 401
+G++P+ C +C AFT +AN +H++VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 38.6 bits (89), Expect = 1e-04
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 428 HSGERPYHCRYCTKTFIQQSNLDRHERVHT 457
SG+RP+ CR C F ++N RH +VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 37.4 bits (86), Expect = 3e-04
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 400 HTGERPYSCKLCGKRFTQQANLVKHNRLHS 429
+G+RP+ C++C FT +AN +H ++H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 36.3 bits (83), Expect = 7e-04
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 92 HTGERPFRCEVCMKTFTQQPNLWKHMKTHT 121
+G+RPF C +C+ FT + N +H+K HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 36.3 bits (83), Expect = 7e-04
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 167 HTGERPFRCEVCMKTFTQQPNLWKHMKTHT 196
+G+RPF C +C+ FT + N +H+K HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 36.3 bits (83), Expect = 7e-04
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 344 HTGERPFRCEVCMKTFTQQPNLWKHMKTHT 373
+G+RPF C +C+ FT + N +H+K HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 30.9 bits (69), Expect = 0.058
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 120 HTGEKPYNCGMCDKAFTQRAN 140
+G++P+ C +C AFT +AN
Sbjct: 2 SSGKRPFVCRICLSAFTTKAN 22
Score = 27.8 bits (61), Expect = 0.78
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 456 HTGVKPYSCKICWKAFAQTGNLTKH 480
+G +P+ C+IC AF N +H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARH 26
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 44.8 bits (105), Expect = 6e-05
Identities = 51/359 (14%), Positives = 92/359 (25%), Gaps = 146/359 (40%)
Query: 68 GWLEELPLVNLPLERSRR-----STHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTG 122
+L P+ + S +R++ + F K + + ++
Sbjct: 92 KFLMS-PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA-----KYNVSRLQPYLKLRQALL 145
Query: 123 E-KPYN----CGM--CDKAFTQRANLWGSW----VCHPTAVRD-----LFLVNLGTHERI 166
E +P G+ K +W VC V+ +F +NL
Sbjct: 146 ELRPAKNVLIDGVLGSGK----------TWVALDVCLSYKVQCKMDFKIFWLNLK----- 190
Query: 167 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTEN 226
C L + D +T R++ +I++ +
Sbjct: 191 -------NCNSPETVLEMLQKLLYQI--------------DPNWTSRSDHSSNIKLRIHS 229
Query: 227 LKLYTRRKEEVEVEVDVCAGIYPLHQEGGVGLMGLPSHCCPGPIRKRKKKPR-----RDG 281
++ RR L+ K K +
Sbjct: 230 IQAELRR------------------------LL------------KSKPYENCLLVLLN- 252
Query: 282 TFVCKVCN----KTFTQSSWGHKGLTKSRDIQ-------NLTGKISWAH---------SE 321
V N F S K L +R Q T IS H +
Sbjct: 253 -----VQNAKAWNAFNLSC---KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 322 RNISGWL----EELPLLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
+ +L ++LP V L T+ P R + ++ W + K +K
Sbjct: 305 SLLLKYLDCRPQDLPREV-LTTN--------PRRLSIIAESIRDGLATWDNWKHVNCDK 354
Score = 35.2 bits (80), Expect = 0.069
Identities = 69/500 (13%), Positives = 124/500 (24%), Gaps = 157/500 (31%)
Query: 21 RDGTFVCKVCNKTFTQSSWGHKGLTKSRD-----IQNLTGKISWAHSERNISGWLEELPL 75
CK+ K F W + S + +Q L +I + R+ +L +
Sbjct: 172 LSYKVQCKMDFKIF----WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 76 VNLPLERSRRSTHERIHTGERPFRC-----EVCMKTFTQQPNLWKHMKTHTGEKPYNCGM 130
++ RR + + C V W
Sbjct: 228 HSIQ-AELRRLLKSKPYE-----NCLLVLLNVQ------NAKAWNAFNLS---------- 265
Query: 131 C-------DKAFTQRANLWGSWVCHPTAV-----------RDLFLVNLGTH-----ERIH 167
C K T L + H + + L L L +
Sbjct: 266 CKILLTTRFKQVTDF--LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323
Query: 168 TGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK-------------PYNCGMCDKAFTQRA 214
T P R + ++ W + K +K P K F + +
Sbjct: 324 TTN-PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE---YRKMFDRLS 379
Query: 215 NLLKHIRVHTENLKLYTRRKEEVEVEVDVCAGIYPLHQ---------EGGVGLMGLPSHC 265
+ T L L + +V V V LH+ E + + +
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKSDVMVVVNK----LHKYSLVEKQPKESTISIPSI---- 431
Query: 266 CPGPIRKRKKKPRRDGTFVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNIS 325
+ K K + H+ + +I +
Sbjct: 432 ----YLELKVKLENEYAL---------------HRSIVDHYNIP------------KTFD 460
Query: 326 GWLEELPLLVN-----LGTH-ERIHTGER--PFRCEVCMKTFTQQPNL-WKHMK-THTGE 375
P L +G H + I ER FR F + + K H
Sbjct: 461 SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR-----MVFL---DFRFLEQKIRHDST 512
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERPYH 435
G N L+ ++ + +PY C K + + N + E
Sbjct: 513 AWNASG-------SILNTLQQLKFY---KPYICDNDPK-YERLVNAILDFLPKIEENLIC 561
Query: 436 CRYCTKTFIQQSNLDRHERV 455
+Y ++ + + E +
Sbjct: 562 SKYT--DLLRIALMAEDEAI 579
Score = 32.5 bits (73), Expect = 0.46
Identities = 54/380 (14%), Positives = 95/380 (25%), Gaps = 132/380 (34%)
Query: 179 MKTFTQQPNLWKHMKTHTGEKPYNCG-MCDKAFTQRANLLKHIRVHTENLKLYTRRKEEV 237
+KT +QP++ M ++ YN + K R +R L+
Sbjct: 98 IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR--------- 148
Query: 238 EVEVDVCAGIYPLHQEGGVGLMGLPSHCCPGPIRKRKKKPRRDGTFVCKVCNKTFTQSSW 297
+V + G G + C CK+ K F W
Sbjct: 149 -PAKNVL-----IDGVLGSGKTWVALDVC------------LSYKVQCKMDFKIF----W 186
Query: 298 GHKGLTKSRD-----IQNLTGKISWAHSERNISGWLEELPLLVNLGTHE-RIHTGERPF- 350
+ S + +Q L +I + R+ + L ++ E R +P+
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS--SNIKLRIHSIQAELRRLLKSKPYE 244
Query: 351 RC-----EVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERP 405
C V W AF NL
Sbjct: 245 NCLLVLLNVQ------NAKAWN------------------AF----NL------------ 264
Query: 406 YSCK-LCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVHTGVKPYSC 464
SCK L RF Q + + S H LD H T
Sbjct: 265 -SCKILLTTRFKQVTDFL------SAATTTHIS-----------LDHHSMTLT--PDEVK 304
Query: 465 KICWKAFAQTGNLTKHELSAHGIGKPGVNKGTNTHNCEEKCSIPVLLCSKTGKILKKLPM 524
+ + + +L P E + S + ++
Sbjct: 305 SL----LLKYLDCRPQDL-------P-----------REVLTTNPRRLSIIAESIRDGLA 342
Query: 525 K---YHHHSGESVEIGMDAC 541
+ H + + + +++
Sbjct: 343 TWDNWKHVNCDKLTTIIESS 362
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 39.2 bits (92), Expect = 7e-05
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 432 RPYHCRYCTKTFIQQSNLDRHERVHTGVK 460
R + C CT+ F +Q +L RH R HT K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 37.3 bits (87), Expect = 3e-04
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 96 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 124
R F CEVC + F +Q +L +H ++HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 37.3 bits (87), Expect = 3e-04
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 171 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 199
R F CEVC + F +Q +L +H ++HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 37.3 bits (87), Expect = 3e-04
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 348 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
R F CEVC + F +Q +L +H ++HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 35.8 bits (83), Expect = 0.001
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 404 RPYSCKLCGKRFTQQANLVKHNRLHSGER 432
R + C++C + F +Q +L +H R H+ E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 35.0 bits (81), Expect = 0.002
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVHTGER 404
+ + C +C +AF ++ +L +H R HT E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.4 bits (69), Expect = 0.083
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 199 KPYNCGMCDKAFTQRANLLKHIRVHT 224
+ + C +C +AF ++ +L +H R HT
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHT 26
Score = 26.1 bits (58), Expect = 2.6
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 460 KPYSCKICWKAFAQTGNLTKHELS 483
+ + C++C +AFA+ +L +H S
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRS 24
Score = 24.6 bits (54), Expect = 8.5
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 19/48 (39%)
Query: 124 KPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIHTGER 171
+ + C +C +AF + +L H R HT E+
Sbjct: 1 RSFVCEVCTRAFAR-------------------QEHLKRHYRSHTNEK 29
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 40.9 bits (95), Expect = 7e-05
Identities = 15/76 (19%), Positives = 22/76 (28%), Gaps = 5/76 (6%)
Query: 367 KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIR-VHTGER---PYSCKLCGKRFTQQANLV 422
+ + E Y C C H+ H Y C C + L
Sbjct: 8 HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 67
Query: 423 KHN-RLHSGERPYHCR 437
+HN + H GE +
Sbjct: 68 EHNLKYHPGEENFKLT 83
Score = 37.8 bits (87), Expect = 0.001
Identities = 14/80 (17%), Positives = 24/80 (30%), Gaps = 5/80 (6%)
Query: 392 NLLKHIRVHTGERPYSCKLCGKRFTQQANLVKH-NRLHSGER---PYHCRYCTKTFIQQS 447
+ + + E Y CK C + H + H Y C C +
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 448 NLDRH-ERVHTGVKPYSCKI 466
L H + H G + + +
Sbjct: 65 ALSEHNLKYHPGEENFKLTM 84
Score = 35.9 bits (82), Expect = 0.004
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 420 NLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRH-ERVHTGVK---PYSCKICWKAFAQTG 475
+ + + E Y C+YCT + H + H V Y C C +
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 476 NLTKHELSAH 485
L++H L H
Sbjct: 65 ALSEHNLKYH 74
Score = 35.9 bits (82), Expect = 0.005
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 340 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKT-HTG---EKPYNCGMCDKAFTQRANLLK 395
+++ E + C+ C H+ + H Y C C+ + L +
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 396 HI-RVHTGERPYSCKL 410
H + H GE + +
Sbjct: 69 HNLKYHPGEENFKLTM 84
Score = 29.4 bits (65), Expect = 0.89
Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Query: 163 HERIHTGERPFRCEVCMKTFTQQPNLWKHMKT-HTG---EKPYNCGMCDKAFTQRANLLK 218
+++ E + C+ C H+ + H Y C C+ + L +
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 219 HI-RVHTEN 226
H + H
Sbjct: 69 HNLKYHPGE 77
Score = 26.7 bits (58), Expect = 7.8
Identities = 16/93 (17%), Positives = 25/93 (26%), Gaps = 18/93 (19%)
Query: 115 KHMKTHTGEKPYNCGMCDKAFTQRANLWG-SWVCHPTAVRDLFLVNLGTHERIHTGERPF 173
+ + E Y C C HP V + +
Sbjct: 8 HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLN----------------SSY 51
Query: 174 RCEVCMKTFTQQPNLWKH-MKTHTGEKPYNCGM 205
C C + L +H +K H GE+ + M
Sbjct: 52 VCVECNFLTKRYDALSEHNLKYHPGEENFKLTM 84
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 37.0 bits (85), Expect = 4e-04
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 432 RPYHCRYCTKTFIQQSNLDRHERVHTGVK 460
+PY C +C + F L RH R+HTG K
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 36.3 bits (83), Expect = 7e-04
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVHTGER 404
KPY C C + F L +H+R+HTGE+
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 33.2 bits (75), Expect = 0.009
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 404 RPYSCKLCGKRFTQQANLVKHNRLHSGER 432
+PY C C ++F L +H R+H+GE+
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 32.0 bits (72), Expect = 0.025
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 199 KPYNCGMCDKAFTQRANLLKHIRVHT 224
KPY C C + F L +H+R+HT
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHT 27
Score = 31.3 bits (70), Expect = 0.040
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 96 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 124
+P+ C C + F L +H++ HTGEK
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 31.3 bits (70), Expect = 0.040
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 171 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 199
+P+ C C + F L +H++ HTGEK
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 31.3 bits (70), Expect = 0.040
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 348 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
+P+ C C + F L +H++ HTGEK
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 30.9 bits (69), Expect = 0.059
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 459 VKPYSCKICWKAFAQTGNLTKHE 481
+KPY C C + FA G L +H
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHV 23
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 36.3 bits (83), Expect = 7e-04
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVHTGER 404
KP C MC KAFTQ ++L+ H+R HTGE+
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 34.0 bits (77), Expect = 0.005
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 404 RPYSCKLCGKRFTQQANLVKHNRLHSGER 432
+P C +CGK FTQ ++L+ H R H+GE+
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 32.0 bits (72), Expect = 0.025
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 199 KPYNCGMCDKAFTQRANLLKHIRVHT 224
KP C MC KAFTQ ++L+ H+R HT
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHT 26
Score = 31.7 bits (71), Expect = 0.029
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 96 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 124
+P +C +C K FTQ +L H++ HTGEK
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 31.7 bits (71), Expect = 0.029
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 171 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 199
+P +C +C K FTQ +L H++ HTGEK
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 31.7 bits (71), Expect = 0.029
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 348 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
+P +C +C K FTQ +L H++ HTGEK
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 27.0 bits (59), Expect = 1.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 432 RPYHCRYCTKTFIQQSNLDRHERVHTGVK 460
+P C C K F Q S+L H R HTG K
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 36.4 bits (83), Expect = 8e-04
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 400 HTGERPYSCKLCGKRFTQQANLVKHNRLHSG 430
+GE+PYSC +CG RF ++ + H R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 34.1 bits (77), Expect = 0.005
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 372 HTGEKPYNCGMCDKAFTQRANLLKHIRVHTG 402
+GEKPY+C +C F ++ + H+R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 33.4 bits (75), Expect = 0.009
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 92 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTG 122
+GE+P+ C VC F ++ + H+++H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 33.4 bits (75), Expect = 0.009
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 167 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTG 197
+GE+P+ C VC F ++ + H+++H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 33.4 bits (75), Expect = 0.009
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 344 HTGERPFRCEVCMKTFTQQPNLWKHMKTHTG 374
+GE+P+ C VC F ++ + H+++H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 33.4 bits (75), Expect = 0.010
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 428 HSGERPYHCRYCTKTFIQQSNLDRHERVHTG 458
SGE+PY C C F ++ + H R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 32.6 bits (73), Expect = 0.018
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 195 HTGEKPYNCGMCDKAFTQRANLLKHIRVH 223
+GEKPY+C +C F ++ + H+R H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 29.9 bits (66), Expect = 0.18
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 456 HTGVKPYSCKICWKAFAQTGNLTKHELSAHG 486
+G KPYSC +C F + ++ H S G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 26.8 bits (58), Expect = 2.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 120 HTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAV 152
+GEKPY+C +C F ++ + H +V
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 37
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 35.7 bits (83), Expect = 0.001
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 432 RPYHCRY--CTKTFIQQSNLDRHERVHTGVK 460
RP+ C + C K F + L RH+R HTG K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 35.7 bits (83), Expect = 0.001
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 404 RPYSC--KLCGKRFTQQANLVKHNRLHSGER 432
RP+ C CGKRFT+ L +H R H+GE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 34.9 bits (81), Expect = 0.002
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 376 KPYNCGM--CDKAFTQRANLLKHIRVHTGER 404
+P+ C C K FT+ L +H R HTGE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 34.1 bits (79), Expect = 0.003
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 96 RPFRC--EVCMKTFTQQPNLWKHMKTHTGEK 124
RPF C C K FT+ L +H +THTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 34.1 bits (79), Expect = 0.003
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 171 RPFRC--EVCMKTFTQQPNLWKHMKTHTGEK 199
RPF C C K FT+ L +H +THTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 34.1 bits (79), Expect = 0.003
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 348 RPFRC--EVCMKTFTQQPNLWKHMKTHTGEK 376
RPF C C K FT+ L +H +THTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.5 bits (67), Expect = 0.18
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 199 KPYNCGM--CDKAFTQRANLLKHIRVHT 224
+P+ C C K FT+ L +H R HT
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHT 28
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 35.6 bits (81), Expect = 0.001
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 373 TGEKPYNCGMCDKAFTQRANLLKHIRVHTGER 404
+ KPY C C A +ANL H+R HTGE+
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 31.0 bits (69), Expect = 0.067
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 196 TGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ KPY C C A +ANL H+R HT
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHT 33
Score = 29.0 bits (64), Expect = 0.28
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 93 TGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 124
+ +P++C C + NL H++ HTGEK
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 29.0 bits (64), Expect = 0.28
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 168 TGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 199
+ +P++C C + NL H++ HTGEK
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 29.0 bits (64), Expect = 0.28
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 345 TGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
+ +P++C C + NL H++ HTGEK
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 28.6 bits (63), Expect = 0.40
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 401 TGERPYSCKLCGKRFTQQANLVKHNRLHSGER 432
+ +PY C C +ANL H R H+GE+
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 27.9 bits (61), Expect = 0.85
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 432 RPYHCRYCTKTFIQQSNLDRHERVHTGVK 460
+PY C C+ ++NL+ H R HTG K
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 35.4 bits (82), Expect = 0.001
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 429 SGERPYHCRY--CTKTFIQQSNLDRHERVHTGVK 460
++ + C C K + + S+L H R HTG +
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 33.9 bits (78), Expect = 0.006
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 373 TGEKPYNCGM--CDKAFTQRANLLKHIRVHTGER 404
+K + C + C K + + ++L H+R HTGER
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 32.3 bits (74), Expect = 0.017
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 93 TGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEK 124
++ C + C K + + +L H++ HTGE+
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 32.3 bits (74), Expect = 0.017
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 168 TGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEK 199
++ C + C K + + +L H++ HTGE+
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 32.3 bits (74), Expect = 0.017
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 345 TGERPFRCEV--CMKTFTQQPNLWKHMKTHTGEK 376
++ C + C K + + +L H++ HTGE+
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 32.3 bits (74), Expect = 0.020
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 401 TGERPYSCKL--CGKRFTQQANLVKHNRLHSGER 432
++ + C + CGK + + ++L H R H+GER
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 27.3 bits (61), Expect = 1.0
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 196 TGEKPYNCGM--CDKAFTQRANLLKHIRVHT 224
+K + C + C K + + ++L H+R HT
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHT 34
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 39.5 bits (91), Expect = 0.003
Identities = 9/50 (18%), Positives = 14/50 (28%)
Query: 407 SCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHERVH 456
+ ++ V S Y C C+ +LD H H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.1 bits (90), Expect = 0.004
Identities = 9/52 (17%), Positives = 15/52 (28%)
Query: 172 PFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVH 223
E ++ P T + Y C +C +L H+ H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.1 bits (90), Expect = 0.004
Identities = 9/52 (17%), Positives = 15/52 (28%)
Query: 349 PFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVH 400
E ++ P T + Y C +C +L H+ H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.1 bits (90), Expect = 0.004
Identities = 7/43 (16%), Positives = 15/43 (34%)
Query: 78 LPLERSRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTH 120
+ + R + ++C VC +L H+ +H
Sbjct: 161 IVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.8 bits (84), Expect = 0.020
Identities = 6/48 (12%), Positives = 12/48 (25%)
Query: 382 MCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHS 429
++ + + Y C +C +L H H
Sbjct: 157 ATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204
Score = 36.8 bits (84), Expect = 0.023
Identities = 6/34 (17%), Positives = 12/34 (35%)
Query: 162 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTH 195
+ ++C VC +L H+ +H
Sbjct: 170 GLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.8 bits (84), Expect = 0.023
Identities = 6/34 (17%), Positives = 12/34 (35%)
Query: 339 THERIHTGERPFRCEVCMKTFTQQPNLWKHMKTH 372
+ ++C VC +L H+ +H
Sbjct: 170 GLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.4 bits (78), Expect = 0.11
Identities = 8/53 (15%), Positives = 14/53 (26%), Gaps = 1/53 (1%)
Query: 439 CTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKHELSAHGIGKPG 491
+ + + Y C +C +L H S HG+
Sbjct: 158 TSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVAS-HGLHGNM 209
Score = 30.2 bits (67), Expect = 2.0
Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 2/65 (3%)
Query: 79 PLERSRRSTHE--RIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFT 136
L RS +E E ++ P T + Y C +C
Sbjct: 132 ELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLF 191
Query: 137 QRANL 141
+L
Sbjct: 192 SPLDL 196
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 34.4 bits (78), Expect = 0.005
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 401 TGERPYSCKLCGKRFTQQANLVKHNRLHSGER 432
+ E+ + C+ CG+ F Q +L++H LH G++
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 34.0 bits (77), Expect = 0.007
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 429 SGERPYHCRYCTKTFIQQSNLDRHERVHTGVK 460
S E+ + CR C + F Q +L H+ +H G K
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 33.3 bits (75), Expect = 0.010
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 373 TGEKPYNCGMCDKAFTQRANLLKHIRVHTGER 404
+ EK + C C + F Q +L++H +H G++
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 29.8 bits (66), Expect = 0.24
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 93 TGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 124
+ E+ +C C + F Q +L +H H G+K
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 29.8 bits (66), Expect = 0.24
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 168 TGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 199
+ E+ +C C + F Q +L +H H G+K
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 29.8 bits (66), Expect = 0.24
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 345 TGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
+ E+ +C C + F Q +L +H H G+K
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 29.4 bits (65), Expect = 0.27
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 196 TGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ EK + C C + F Q +L++H +H
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHM 36
Score = 25.5 bits (55), Expect = 6.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 460 KPYSCKICWKAFAQTGNLTKHELSAHGIGKPGVNKG 495
K + C+ C + F Q +L +H++ G G + G
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG 46
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 37.1 bits (85), Expect = 0.008
Identities = 39/234 (16%), Positives = 65/234 (27%), Gaps = 35/234 (14%)
Query: 10 GPIRKRKKKPRRDGTFV-CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISG 68
G K + F C+ C + F H D G A
Sbjct: 15 GKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALT----- 69
Query: 69 WLEELPLVNLPLERSR------RSTHERIHTGER--PFRCEVCMKTFTQQPNLWKHMKTH 120
+P + + + R +E I G P+ ++ + + W + +
Sbjct: 70 ----IPQ-GMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKN 124
Query: 121 TGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDLFLVNLGTHERIH--------TGE-- 170
D + +AN W +V R+ L+ ERI+ GE
Sbjct: 125 NR-----YKSIDGSDETKAN-WMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWL 178
Query: 171 RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHT 224
R + E MK H GEK ++ +L I +
Sbjct: 179 RVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSV 232
Score = 35.2 bits (80), Expect = 0.031
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 2/68 (2%)
Query: 339 THERIHTGE--RPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKH 396
I GE R + E MK H GEK ++ +L
Sbjct: 168 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP 227
Query: 397 IRVHTGER 404
I + +
Sbjct: 228 IHLSVLRQ 235
Score = 30.9 bits (69), Expect = 0.74
Identities = 7/55 (12%), Positives = 15/55 (27%)
Query: 145 WVCHPTAVRDLFLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 199
W R + H + GE+ + E + +L + +
Sbjct: 181 WYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
Score = 30.9 bits (69), Expect = 0.78
Identities = 6/42 (14%), Positives = 15/42 (35%)
Query: 83 SRRSTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 124
S+ + H + GE+ + E + +L + +
Sbjct: 194 SQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
Score = 30.9 bits (69), Expect = 0.81
Identities = 6/50 (12%), Positives = 17/50 (34%)
Query: 327 WLEELPLLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
+++ L + H + GE+ + E + +L + +
Sbjct: 186 YMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
Score = 30.6 bits (68), Expect = 1.0
Identities = 30/224 (13%), Positives = 61/224 (27%), Gaps = 22/224 (9%)
Query: 268 GPIRKRKKKPRRDGTFV-CKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISG 326
G K + F C+ C + F H D G + I
Sbjct: 15 GKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPD--RAALTIPQ 72
Query: 327 WLEELPLLVNLG----THERIHTGER--PFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC 380
+E + +E I G P+ ++ + + W + +
Sbjct: 73 GMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNR-----Y 127
Query: 381 GMCDKAFTQRANLLKHIRV--HTGERPYSCKLCGKR--FTQQANLVKHNRLHSGERPYHC 436
D + +AN ++++ + E+ +R F ++ L R ++
Sbjct: 128 KSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWL----RVWYS 183
Query: 437 RYCTKTFIQQSNLDRHERVHTGVKPYSCKICWKAFAQTGNLTKH 480
K S H + G K + + +L
Sbjct: 184 EDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP 227
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 33.2 bits (75), Expect = 0.009
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 404 RPYSCKLCGKRFTQQANLVKHNRLHSG 430
RPYSC +CGKRF+ + + H R+H+G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 29.8 bits (66), Expect = 0.16
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 432 RPYHCRYCTKTFIQQSNLDRHERVHTG 458
RPY C C K F + ++ H RVHTG
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 29.4 bits (65), Expect = 0.20
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVHTG 402
+PY+C +C K F+ + + H RVHTG
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 27.5 bits (60), Expect = 0.93
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 199 KPYNCGMCDKAFTQRANLLKHIRVHT 224
+PY+C +C K F+ + + H RVHT
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHT 27
Score = 26.3 bits (57), Expect = 2.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 96 RPFRCEVCMKTFTQQPNLWKHMKTHTG 122
RP+ C VC K F+ + + H + HTG
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.3 bits (57), Expect = 2.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 171 RPFRCEVCMKTFTQQPNLWKHMKTHTG 197
RP+ C VC K F+ + + H + HTG
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.3 bits (57), Expect = 2.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 348 RPFRCEVCMKTFTQQPNLWKHMKTHTG 374
RP+ C VC K F+ + + H + HTG
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 33.3 bits (75), Expect = 0.010
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 194 THTGEKPYNCGMCDKAFTQRANLLKHIRVHTENLK 228
+ EK + C C+K F+ L +H R+HT +K
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVK 40
Score = 31.7 bits (71), Expect = 0.043
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 428 HSGERPYHCRYCTKTFIQQSNLDRHERVHT 457
E+ + C C KTF L +HER+HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 31.3 bits (70), Expect = 0.049
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 371 THTGEKPYNCGMCDKAFTQRANLLKHIRVHT 401
+ EK + C C+K F+ L +H R+HT
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 30.2 bits (67), Expect = 0.15
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 92 HTGERPFRCEVCMKTFTQQPNLWKHMKTHT 121
E+ F+C C KTF+ L +H + HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 30.2 bits (67), Expect = 0.15
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 167 HTGERPFRCEVCMKTFTQQPNLWKHMKTHT 196
E+ F+C C KTF+ L +H + HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 30.2 bits (67), Expect = 0.15
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 344 HTGERPFRCEVCMKTFTQQPNLWKHMKTHT 373
E+ F+C C KTF+ L +H + HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 28.6 bits (63), Expect = 0.54
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 400 HTGERPYSCKLCGKRFTQQANLVKHNRLHS 429
E+ + C C K F+ L +H R+H+
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 31.7 bits (71), Expect = 0.034
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 98 FRCEVCMKTFTQQPNLWKHMKTHTGEK 124
F CE C K F + +L H++ HT EK
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 31.7 bits (71), Expect = 0.034
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 173 FRCEVCMKTFTQQPNLWKHMKTHTGEK 199
F CE C K F + +L H++ HT EK
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 31.7 bits (71), Expect = 0.034
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 350 FRCEVCMKTFTQQPNLWKHMKTHTGEK 376
F CE C K F + +L H++ HT EK
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 29.8 bits (66), Expect = 0.15
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVHTGER 404
K + C C+K F + +L H+R+HT E+
Sbjct: 8 KIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.7 bits (58), Expect = 1.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 406 YSCKLCGKRFTQQANLVKHNRLHSGER 432
++C+ C K F + +L H R+H+ E+
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.7 bits (58), Expect = 1.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 434 YHCRYCTKTFIQQSNLDRHERVHTGVK 460
+ C YC K F + +L H R+HT K
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.4 bits (57), Expect = 2.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 199 KPYNCGMCDKAFTQRANLLKHIRVHT 224
K + C C+K F + +L H+R+HT
Sbjct: 8 KIFTCEYCNKVFKFKHSLQAHLRIHT 33
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 32
Score = 31.1 bits (70), Expect = 0.047
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 431 ERPYHCRY--CTKTFIQQSNLDRHERVHT 457
+RPY C + C K F++ +L RH++ H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 29.2 bits (65), Expect = 0.25
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 403 ERPYSCKL--CGKRFTQQANLVKHNRLHS 429
+RPYSC C K F + +L++H + H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 29.2 bits (65), Expect = 0.27
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 198 EKPYNCGM--CDKAFTQRANLLKHIRVHTEN 226
++PY+C CDKAF + +L++H + H E
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 27.3 bits (60), Expect = 1.1
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 375 EKPYNCGM--CDKAFTQRANLLKHIRVHT 401
++PY+C CDKAF + +L++H + H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.9 bits (59), Expect = 1.4
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 95 ERPFRCEV--CMKTFTQQPNLWKHMKTHT 121
+RP+ C+ C K F + +L +H K+H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.9 bits (59), Expect = 1.4
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 170 ERPFRCEV--CMKTFTQQPNLWKHMKTHT 196
+RP+ C+ C K F + +L +H K+H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.9 bits (59), Expect = 1.4
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 347 ERPFRCEV--CMKTFTQQPNLWKHMKTHT 373
+RP+ C+ C K F + +L +H K+H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 30.8 bits (69), Expect = 0.058
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 404 RPYSCKLCGKRFTQQANLVKHNRLH 428
+PY C+ CGKRF Q + L H R H
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHH 25
Score = 27.7 bits (61), Expect = 0.70
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 199 KPYNCGMCDKAFTQRANLLKHIRVH 223
KPY C C K F Q + L HIR H
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHH 25
Score = 27.7 bits (61), Expect = 0.70
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVH 400
KPY C C K F Q + L HIR H
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHH 25
Score = 26.6 bits (58), Expect = 2.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 432 RPYHCRYCTKTFIQQSNLDRHERVH 456
+PY C C K F+Q S L H R H
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHH 25
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 31.0 bits (69), Expect = 0.066
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 402 GERPYSCKLCGKRFTQQANLVKHNRLHSGE 431
+ C+ CGK F + L++H LH+GE
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGE 38
Score = 30.3 bits (67), Expect = 0.13
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 374 GEKPYNCGMCDKAFTQRANLLKHIRVHTGE 403
+ C C K F + L++H +H GE
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGE 38
Score = 27.9 bits (61), Expect = 0.83
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 94 GERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 129
+ C+ C K F L +H H GE + G
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG 44
Score = 27.9 bits (61), Expect = 0.83
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 169 GERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 204
+ C+ C K F L +H H GE + G
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG 44
Score = 27.9 bits (61), Expect = 0.83
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 346 GERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNCG 381
+ C+ C K F L +H H GE + G
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG 44
Score = 27.2 bits (59), Expect = 1.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 429 SGERPYHCRYCTKTFIQQSNLDRHERVHTG 458
+ + C+ C K F S L H+ +H G
Sbjct: 8 AAKTTSECQECGKIFRHSSLLIEHQALHAG 37
Score = 26.4 bits (57), Expect = 3.5
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 197 GEKPYNCGMCDKAFTQRANLLKHIRVHT 224
+ C C K F + L++H +H
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHA 36
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 35.0 bits (80), Expect = 0.066
Identities = 46/289 (15%), Positives = 70/289 (24%), Gaps = 123/289 (42%)
Query: 299 HKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLLVNLGTHERIHTGERPFRCEVCMKT 358
H G K + I+ + + E + G L+ + + H +T + T
Sbjct: 1675 HFGGEKGKRIRENYSAMIF---ETIVDGKLKTEKIFKEINEHSTSYTFRSE--KGLLSAT 1729
Query: 359 FTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLL------KHIRVHTGERPYSCKLCG 412
FTQ A L + ++ G P G
Sbjct: 1730 ---------------------------QFTQPALTLMEKAAFEDLK-SKGLIPADATFAG 1761
Query: 413 KRFTQQANLVKHNRLHS-GERPY-------------------HCRYCTKTFIQQSNLDRH 452
HS GE Y R T D
Sbjct: 1762 ---------------HSLGE--YAALASLADVMSIESLVEVVFYR--GMTMQVAVPRDEL 1802
Query: 453 ERVHTG---VKPYSC----------KICWKAFAQTGNLTKHELSAHGIGKPGVNKGTNTH 499
R + G + P + + +TG L + VN +
Sbjct: 1803 GRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWL----VEI-------VN-----Y 1846
Query: 500 NCEEK---CS---------IPVLLCSKTGKI-LKKLPMKYHHHSGESVE 535
N E + + VL K KI + +L S E VE
Sbjct: 1847 NVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSL---SLEEVE 1892
Score = 31.9 bits (72), Expect = 0.60
Identities = 29/159 (18%), Positives = 46/159 (28%), Gaps = 32/159 (20%)
Query: 101 EVCM-----KTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLWGSWVCHPTAVRDL 155
E M KT ++W H + Y + D N P +
Sbjct: 1628 EQGMGMDLYKTSKAAQDVWNRADNHFKDT-YGFSILD---IVINN--------PVNLTIH 1675
Query: 156 FLVNLGTHERIHTGERPFRCEVCMKTFTQQPNLWKHMKTHTGEKPYNC--GMCDK-AFTQ 212
F G +RI E + + ++K + H+ + G+ FTQ
Sbjct: 1676 FGGEKG--KRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQ 1733
Query: 213 RANLLKHIRVHTENLKLYTRRKEEVEVEVDVCAGIYPLH 251
A L E+LK + + AG H
Sbjct: 1734 PALTLMEKAA-FEDLK-----SKGLIPADATFAG----H 1762
Score = 30.4 bits (68), Expect = 1.8
Identities = 46/237 (19%), Positives = 71/237 (29%), Gaps = 85/237 (35%)
Query: 323 NISGWLEEL--------PLLVNLGTHERIHTGERPFRCEVCMKTFTQQPNL--WKHMKTH 372
N + EEL L+ +L E K FTQ N+ W ++
Sbjct: 165 NTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSN 224
Query: 373 TGEKPYNCGMCDKAFTQRANLLKHIRVHTGERPYSCKLCGKRFTQQAN-LVKHNRLHSGE 431
T +K Y L I P SC L G Q A+ +V L G
Sbjct: 225 TPDKDY---------------LLSI-------PISCPLIG--VIQLAHYVVTAKLL--GF 258
Query: 432 RPYHCRYCTK------------TFIQQS--------NLDRHERV--HTGVKPYSCKICWK 469
P R K I ++ ++ + V GV+ C++
Sbjct: 259 TPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVR------CYE 312
Query: 470 AFAQTGNLTKHELS---AHGIGKP-------GVNKG--------TNTH-NCEEKCSI 507
A+ T +L L + G P + + TN+H ++ I
Sbjct: 313 AYPNT-SLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEI 368
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 30.6 bits (69), Expect = 0.079
Identities = 13/28 (46%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIR-VHTG 402
K Y CG+C++AFT+R L++H + +H+G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 30.2 bits (68), Expect = 0.085
Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 199 KPYNCGMCDKAFTQRANLLKHIR-VHTENL 227
K Y CG+C++AFT+R L++H + +H+ NL
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL 30
Score = 27.5 bits (61), Expect = 1.0
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 404 RPYSCKLCGKRFTQQANLVKH-NRLHSG 430
+ Y+C LC + FT++ L++H ++HSG
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.7 bits (59), Expect = 1.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 460 KPYSCKICWKAFAQTGNLTKHELSAHG 486
K Y+C +C +AF + L +H H
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHS 27
Score = 25.2 bits (55), Expect = 6.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 124 KPYNCGMCDKAFTQR 138
K Y CG+C++AFT+R
Sbjct: 1 KAYACGLCNRAFTRR 15
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 30.1 bits (67), Expect = 0.092
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 434 YHCRYCTKTFIQQSNLDRHERVH 456
Y C C ++F+++S L RH+RVH
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVH 24
Score = 29.7 bits (66), Expect = 0.13
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 201 YNCGMCDKAFTQRANLLKHIRVH 223
Y CG+C+++F +++ L +H RVH
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVH 24
Score = 29.7 bits (66), Expect = 0.13
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 378 YNCGMCDKAFTQRANLLKHIRVH 400
Y CG+C+++F +++ L +H RVH
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVH 24
Score = 25.9 bits (56), Expect = 3.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 406 YSCKLCGKRFTQQANLVKHNRLHS 429
Y C LC + F +++ L +H R+H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 31.8 bits (71), Expect = 0.12
Identities = 15/69 (21%), Positives = 19/69 (27%), Gaps = 2/69 (2%)
Query: 173 FRCEVCMKTFTQQ-PNLWKHMKT-HTGEKPYNCGMCDKAFTQRANLLKHIRVHTENLKLY 230
C C + L KHM+ + C C K F +A L H
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD 84
Query: 231 TRRKEEVEV 239
E E
Sbjct: 85 AEASEGGES 93
Score = 31.5 bits (70), Expect = 0.18
Identities = 14/58 (24%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 350 FRCEVCMKTFTQQ-PNLWKHMKT-HTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERP 405
C C + L KHM+ + C C K F +A L H +P
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 31.1 bits (69), Expect = 0.21
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 376 KPYNCGMCDKAFTQR-ANLLKHIRV-HTGERPYSCKLCGKRFTQQANLVKHNRLHSGERP 433
C C+ + L KH+ V + C+ C K+F +A L H +P
Sbjct: 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 31.8 bits (71), Expect = 0.13
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 376 KPYNCGMCDKA-FTQRANLLKHIRVHTGERPYSCKLCGKRFTQQANLVKHNRLHSGERP 433
+C C L KH+ + ++C CGK+ A + H + P
Sbjct: 33 GSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 29.1 bits (64), Expect = 1.1
Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 350 FRCEVC-MKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTGERP 405
C C L KHM+ ++ + C C K A + H+ + P
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 27.9 bits (61), Expect = 3.2
Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Query: 173 FRCEVC-MKTFTQQPNLWKHMKTHTGEKPYNCGMCDKAFTQRANLLKHIR 221
C C L KHM+ ++ + C C K A + H+
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVM 83
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 29.8 bits (67), Expect = 0.17
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 375 EKPYNCGM--CDKAFTQRANLLKHIRVHTGER 404
+K + C C K F +R N+ HI+ H +R
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 29.4 bits (66), Expect = 0.26
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 95 ERPFRCEV--CMKTFTQQPNLWKHMKTHTGEK 124
++ F C C KTF ++ N+ H++TH ++
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 29.4 bits (66), Expect = 0.26
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 170 ERPFRCEV--CMKTFTQQPNLWKHMKTHTGEK 199
++ F C C KTF ++ N+ H++TH ++
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 29.4 bits (66), Expect = 0.26
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 347 ERPFRCEV--CMKTFTQQPNLWKHMKTHTGEK 376
++ F C C KTF ++ N+ H++TH ++
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 28.3 bits (63), Expect = 0.78
Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 403 ERPYSCKL--CGKRFTQQANLVKHNRLHSGER 432
++ + C C K F ++ N+ H + H +R
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.1 bits (60), Expect = 1.8
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 198 EKPYNCGM--CDKAFTQRANLLKHIRVHTEN 226
+K + C C K F +R N+ HI+ H E+
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 26.4 bits (58), Expect = 3.2
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 431 ERPYHCRY--CTKTFIQQSNLDRHERVHTG 458
++ + C + CTKTF ++ N+ H + H
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 29.5 bits (66), Expect = 0.19
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 98 FRCEVCMKTFTQQPNLWKHMKTHTGEK 124
F C C K F + +L H+ H +K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 29.5 bits (66), Expect = 0.19
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 173 FRCEVCMKTFTQQPNLWKHMKTHTGEK 199
F C C K F + +L H+ H +K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 29.5 bits (66), Expect = 0.19
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 350 FRCEVCMKTFTQQPNLWKHMKTHTGEK 376
F C C K F + +L H+ H +K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.9 bits (62), Expect = 0.67
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 406 YSCKLCGKRFTQQANLVKHNRLHSGER 432
++C C KRF + +L H LH ++
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 26.0 bits (57), Expect = 3.3
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 378 YNCGMCDKAFTQRANLLKHIRVHTGER 404
+ C C K F + +L HI +H ++
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 24.9 bits (54), Expect = 8.8
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 201 YNCGMCDKAFTQRANLLKHIRVHTEN 226
+ C C K F + +L HI +H
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENK 28
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 29.5 bits (66), Expect = 0.21
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 98 FRCEVCMKTFTQQPNLWKHMKTHTGEKP 125
F C C K F + +L KH+ H
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 29.5 bits (66), Expect = 0.21
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 173 FRCEVCMKTFTQQPNLWKHMKTHTGEKP 200
F C C K F + +L KH+ H
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 29.5 bits (66), Expect = 0.21
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 350 FRCEVCMKTFTQQPNLWKHMKTHTGEKP 377
F C C K F + +L KH+ H
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 28.0 bits (62), Expect = 0.57
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 406 YSCKLCGKRFTQQANLVKHNRLHSGERP 433
++C C KRF + +L KH LH
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 26.0 bits (57), Expect = 3.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 378 YNCGMCDKAFTQRANLLKHIRVHTGERP 405
+ C C K F + +L KHI +H
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 24.9 bits (54), Expect = 8.0
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 201 YNCGMCDKAFTQRANLLKHIRVHTENLK 228
+ C C K F + +L KHI +H +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 29.5 bits (65), Expect = 0.21
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 376 KPYNCGMCDKAFTQRANLLKHIRVHTGER 404
KP+ C +C+ A ++NL H+ H+ E+
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
Score = 27.2 bits (59), Expect = 1.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 199 KPYNCGMCDKAFTQRANLLKHIRVHT 224
KP+ C +C+ A ++NL H+ H+
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHS 33
Score = 26.0 bits (56), Expect = 3.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 96 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 124
+PF+C +C + NL HM H+ EK
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
Score = 26.0 bits (56), Expect = 3.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 171 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 199
+PF+C +C + NL HM H+ EK
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
Score = 26.0 bits (56), Expect = 3.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 348 RPFRCEVCMKTFTQQPNLWKHMKTHTGEK 376
+PF+C +C + NL HM H+ EK
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1
Length = 88
Score = 28.7 bits (63), Expect = 1.1
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 194 THTGEKPYNCGMCDKAFTQRANLLKHIRVHTENLKLYTRRKE 235
Y C CD A L H+ +H E + +R+E
Sbjct: 19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE 60
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
C2H2, APO metal-binding, nucleus, phosphoprotein,
transcription, TRAN regulation; 1.80A {Homo sapiens}
Length = 48
Score = 27.1 bits (59), Expect = 1.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 403 ERPYSCKLCGKRFTQQANLVKH 424
++PY+C +CGKR+ + L H
Sbjct: 5 DKPYACDICGKRYKNRPGLSYH 26
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 26.7 bits (58), Expect = 2.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 403 ERPYSCKLCGKRFTQQANLVKHNRLHSGE 431
+ + C +CGK+F + L H LH+ +
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 30.2 bits (67), Expect = 2.1
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 460 KPYSCKICWKAFAQTGNLTKHELSAHGIG 488
Y C +C F+ L++H S H
Sbjct: 115 SSYVCNVCNARFSTMSALSEHLRSDHRDD 143
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 27
Score = 26.3 bits (57), Expect = 2.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 403 ERPYSCKLCGKRFTQQANLVKHNRLH 428
E+P+SC LC +R + + KH R H
Sbjct: 1 EKPFSCSLCPQRSRDFSAMTKHLRTH 26
Score = 25.5 bits (55), Expect = 4.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 198 EKPYNCGMCDKAFTQRANLLKHIRVH 223
EKP++C +C + + + KH+R H
Sbjct: 1 EKPFSCSLCPQRSRDFSAMTKHLRTH 26
Score = 25.5 bits (55), Expect = 4.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 375 EKPYNCGMCDKAFTQRANLLKHIRVH 400
EKP++C +C + + + KH+R H
Sbjct: 1 EKPFSCSLCPQRSRDFSAMTKHLRTH 26
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 25.9 bits (57), Expect = 3.6
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 404 RPYSCKLCGKRFTQQANLVKHNRLHSGER 432
R Y+C C + F L H +H +R
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVHRRDR 33
>1tdh_A NEI endonuclease VIII-like 1; helix two turns helix, zinc-LESS
finger, hydrolase; 2.10A {Homo sapiens} SCOP: a.156.1.2
b.113.1.1 g.39.1.8
Length = 364
Score = 29.2 bits (65), Expect = 3.6
Identities = 8/32 (25%), Positives = 11/32 (34%), Gaps = 2/32 (6%)
Query: 2 GLPSHCCPGPIRKRKKKPRRDGTFVCKVCNKT 33
G P P + RKKK + T +
Sbjct: 283 GDPGPLAPKGRKSRKKKSK--ATQLSPEDRVE 312
Score = 29.2 bits (65), Expect = 3.6
Identities = 8/32 (25%), Positives = 11/32 (34%), Gaps = 2/32 (6%)
Query: 260 GLPSHCCPGPIRKRKKKPRRDGTFVCKVCNKT 291
G P P + RKKK + T +
Sbjct: 283 GDPGPLAPKGRKSRKKKSK--ATQLSPEDRVE 312
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI,
protein structure initiative, center for eukaryotic
structural genomics, CESG; NMR {Homo sapiens} SCOP:
g.37.1.4
Length = 124
Score = 27.3 bits (60), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 434 YHCRYCTKTFIQQSNLDRHER 454
+ C C + FI +NL H R
Sbjct: 51 HRCLACARYFIDSTNLKTHFR 71
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type
zinc finger, KIAA0530, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.37.1.1
Length = 73
Score = 26.5 bits (57), Expect = 6.6
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 195 HTGEKPYNC--GMCDKAFTQRANLLKHIR-VHTENLKLYTRRKEE 236
++ +PY C C AFT + NL+ H + VH +L ++ EE
Sbjct: 22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEE 66
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL conjugation,
UBL conjugation pathway; 2.20A {Homo sapiens}
Length = 170
Score = 27.7 bits (61), Expect = 7.3
Identities = 15/111 (13%), Positives = 29/111 (26%), Gaps = 3/111 (2%)
Query: 344 HTGERPFRCEVCMKTFTQQPNLW-KHMKTHTGEKPYNCGMCDKAFTQRANLLKHIRVHTG 402
+ +C V + + K C L+ + H
Sbjct: 48 SIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCE 107
Query: 403 ERPYSCKLCGKRFTQQANLVKHNRLHSGERPYHCRYCTKTFIQQSNLDRHE 453
C C + F Q+ ++ H R C C + + + H+
Sbjct: 108 FALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNC-AASMAFEDKEIHD 156
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical,
calmodulin-binding, cell membrane, membrane,
phosphoprotein, protein binding; 2.50A {Homo sapiens}
Length = 193
Score = 27.7 bits (61), Expect = 8.6
Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 21 RDGTFVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLP 79
R+G ++ K+ N + K + + + + H++ N+ WL + + LP
Sbjct: 75 RNGVYLAKLGNFFSPKVVSLKKIYDREQTRYK-ATGLHFRHTD-NVIQWLNAMDEIGLP 131
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo
sapiens}
Length = 190
Score = 27.6 bits (61), Expect = 8.7
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 21 RDGTFVCKVCNKTFTQSSWGHKGLTKSRDIQNLTGKISWAHSERNISGWLEELPLVNLP 79
R+G ++ K+ N F+ K + + + + H++ N+ WL + + LP
Sbjct: 53 RNGVYLAKLGNF-FSPKVVSLKKIYDREQTRYKATGLHFRHTD-NVIQWLNAMDEIGLP 109
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.136 0.454
Gapped
Lambda K H
0.267 0.0623 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,380,149
Number of extensions: 475925
Number of successful extensions: 4370
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3514
Number of HSP's successfully gapped: 1773
Length of query: 543
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 445
Effective length of database: 3,965,535
Effective search space: 1764663075
Effective search space used: 1764663075
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.1 bits)