RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2731
(537 letters)
>d3b7sa1 a.118.1.7 (A:461-610) Leukotriene A4 hydrolase C-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 174 bits (442), Expect = 7e-53
Identities = 58/149 (38%), Positives = 92/149 (61%)
Query: 375 DTSLQDVCNDLANRWISWNHTKETPFSKQDLAAFTPGQKIEFLAILLDKEMYDLPKVKSL 434
D +L + C L+ RWI+ F+ DL + Q EFLA L + L +K +
Sbjct: 1 DMTLTNACIALSQRWITAKEDDLNSFNATDLKDLSSHQLNEFLAQTLQRAPLPLGHIKRM 60
Query: 435 QDVYRFNGVRNCEIRFRWLKLCLKARWKEQVPHVIDMVTSQGRMKYVRPLYRELYAWEDT 494
Q+VY FN + N EIRFRWL+LC++++W++ +P + M T QGRMK+ RPL+++L A++ +
Sbjct: 61 QEVYNFNAINNSEIRFRWLRLCIQSKWEDAIPLALKMATEQGRMKFTRPLFKDLAAFDKS 120
Query: 495 RQTAIDTFKQHRKQMMYVTAYTLAKDLKL 523
A+ T+++H+ M VTA + KDLK+
Sbjct: 121 HDQAVRTYQEHKASMHPVTAMLVGKDLKV 149
Score = 49.8 bits (119), Expect = 5e-08
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 144 DTSLQDVCNDLANRWISWNHTKSPPFSKQDLAAFTPGQKIEFLAK 188
D +L + C L+ RWI+ F+ DL + Q EFLA+
Sbjct: 1 DMTLTNACIALSQRWITAKEDDLNSFNATDLKDLSSHQLNEFLAQ 45
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 252
Score = 77.4 bits (189), Expect = 1e-16
Identities = 95/279 (34%), Positives = 129/279 (46%), Gaps = 48/279 (17%)
Query: 78 LASYKISERCSVWSEPELVKEAADEFNETEKFLSTAEEICGTYVWGVYDLVMLPPSFPFG 137
L S +I R VWSE E V+++A EF+ETE L AE++ G YVWG YDL++LPPSFP+G
Sbjct: 1 LESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGGPYVWGQYDLLVLPPSFPYG 60
Query: 138 GMENPYDTSLQDVCNDLANRWISWNHTKSPPFSKQDLAAFTPGQKIEFLAKSSSYILAGD 197
GMENP L + +LAGD
Sbjct: 61 GMENPC------------------------------------------LTFVTPTLLAGD 78
Query: 198 GSLAAVVAHEISHSWTGNLVTNRNFEHFWLNEGFTMFVERKITGRLRGEAERHFDALSGL 257
SL+ V+AH+ISHSWTGNLVTN+ ++HFWLNEG T+++ER I GRL GE RHF+AL G
Sbjct: 79 KSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGW 138
Query: 258 KDLKQA------AGDGSLAAVVAHEISHSWTGNLVTNRNFEHFWLNEGFTMFVERKITGR 311
+L+ + + V +I + V + G
Sbjct: 139 GELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGF 198
Query: 312 LRGEAERHFDALSGLKDLKQAVSSTGPLWDSKRNALDFQ 350
L+ E+ D K + S N +D+
Sbjct: 199 LKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWN 237
Score = 45.0 bits (105), Expect = 9e-06
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 2 FEPWLKKYLAEFALQSIDTDNFKAHLTSHFAHKPEI-NQIEWDLWLNTTGMPPHIPKY 58
F +LK Y+ +F+ +SI TD++K L S+F K ++ NQ++W+ WL + G+PP P Y
Sbjct: 195 FLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNY 252
>d1p94a_ a.43.1.3 (A:) Plasmid partition protein ParG {Salmonella
enterica [TaxId: 28901]}
Length = 76
Score = 31.5 bits (71), Expect = 0.035
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Query: 327 KDLKQAVSSTGPLWDSKRNALDFQKGRHYQCKIERLKCGSAILFIYGYDTSLQDVCNDLA 386
+DL++ V++ KR ++F + +H + K + G TS+ DV N L
Sbjct: 19 RDLERVVTAPVSSGKIKRVNVNFDEEKHTRFKAACARKG----------TSITDVVNQLV 68
Query: 387 NRWISWN 393
+ W+ N
Sbjct: 69 DNWLKEN 75
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 208
Score = 33.3 bits (75), Expect = 0.047
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 58 YSFYQPIKVPSYLVAIVVG 76
Y F Q + +P YL+A+VVG
Sbjct: 189 YKFIQKVPIPCYLIALVVG 207
>d1psza_ c.92.2.2 (A:) Pneumococcal surface antigen PssA
{Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
Length = 286
Score = 27.6 bits (60), Expect = 3.6
Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 14/114 (12%)
Query: 1 DFEPWLKKYLAEFALQSIDTDNFKAHLTS------HFAHKPEINQIEWDLWLNTTGMPPH 54
+ E + + + T+N S + + E + + WLN
Sbjct: 68 NLETGGNAWFTKLVENAKKTENKDYFAVSDGVDVIYLEGQNEKGKEDPHAWLN------- 120
Query: 55 IPKYSFYQPIKVPSYLVAIVVGNLASYKISERCSVWSEPELVKEAADEFNETEK 108
+ + L A N Y+ + + +L KE+ D+FN+
Sbjct: 121 -LENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPA 173
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]}
Length = 350
Score = 27.4 bits (60), Expect = 5.2
Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 6/126 (4%)
Query: 29 SHF-AHKPEINQIEWDL-WLNTTGMPPHIPKYSFYQPIKVPSYLVAIVVGNLASYKISER 86
H P I +IE + G+ H V VA V +
Sbjct: 207 GHLGIDTPPIAEIEKSIIAFAKLGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDP 266
Query: 87 CSVWSEPELVKEAADEFNE-TEKFLSTAEEICGTYVWGVYDLVMLPPSFPFGGMEN---P 142
+ E+ + A + + + F+ +++I WGV D FP G N
Sbjct: 267 YTKGLPQEMQDKLAKRYEDLFKLFIKHSDKIDRATFWGVSDDASWLNGFPIPGRTNYPLL 326
Query: 143 YDTSLQ 148
+D LQ
Sbjct: 327 FDRKLQ 332
>d1ix1a_ d.167.1.1 (A:) Peptide deformylase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 169
Score = 26.7 bits (58), Expect = 5.8
Identities = 9/72 (12%), Positives = 19/72 (26%)
Query: 139 MENPYDTSLQDVCNDLANRWISWNHTKSPPFSKQDLAAFTPGQKIEFLAKSSSYILAGDG 198
P + + S P +++ + + + +G
Sbjct: 66 KSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEG 125
Query: 199 SLAAVVAHEISH 210
LA + HE H
Sbjct: 126 LLAVCIQHECDH 137
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.423
Gapped
Lambda K H
0.267 0.0425 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,130,033
Number of extensions: 101529
Number of successful extensions: 256
Number of sequences better than 10.0: 1
Number of HSP's gapped: 254
Number of HSP's successfully gapped: 15
Length of query: 537
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 447
Effective length of database: 1,171,896
Effective search space: 523837512
Effective search space used: 523837512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.7 bits)