Query psy2733
Match_columns 644
No_of_seqs 504 out of 4511
Neff 8.6
Searched_HMMs 46136
Date Fri Aug 16 23:49:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2733.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2733hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA02876 ankyrin repeat protei 100.0 5.5E-40 1.2E-44 378.6 29.7 325 2-360 147-497 (682)
2 PHA02874 ankyrin repeat protei 100.0 4.2E-39 9.2E-44 352.0 31.5 263 1-350 36-299 (434)
3 PHA02946 ankyin-like protein; 100.0 1.1E-38 2.3E-43 347.1 28.6 291 2-349 39-365 (446)
4 PHA03095 ankyrin-like protein; 100.0 5.2E-38 1.1E-42 347.6 29.3 271 5-358 19-311 (471)
5 PHA02876 ankyrin repeat protei 100.0 8.1E-38 1.8E-42 360.6 29.0 355 1-378 42-480 (682)
6 PHA02716 CPXV016; CPX019; EVM0 100.0 2.9E-37 6.2E-42 345.9 28.4 265 9-351 151-547 (764)
7 PHA03100 ankyrin repeat protei 100.0 3.4E-37 7.3E-42 341.9 27.2 239 1-347 36-291 (480)
8 KOG0510|consensus 100.0 1.9E-37 4E-42 332.3 22.1 296 1-345 89-416 (929)
9 PHA03095 ankyrin-like protein; 100.0 6.7E-37 1.5E-41 338.7 26.2 254 1-337 48-321 (471)
10 PHA02946 ankyin-like protein; 100.0 1.5E-36 3.3E-41 330.2 27.9 261 1-288 73-368 (446)
11 PHA02878 ankyrin repeat protei 100.0 1.2E-36 2.7E-41 336.5 27.4 226 1-282 38-276 (477)
12 PHA02716 CPXV016; CPX019; EVM0 100.0 2.5E-36 5.5E-41 338.3 27.3 292 1-335 178-569 (764)
13 PHA02875 ankyrin repeat protei 100.0 4E-36 8.7E-41 326.7 28.2 239 1-347 3-246 (413)
14 PHA02730 ankyrin-like protein; 100.0 5E-36 1.1E-40 329.8 28.0 313 1-348 42-505 (672)
15 PHA02791 ankyrin-like protein; 100.0 9.9E-36 2.2E-40 302.8 28.1 238 10-366 9-249 (284)
16 KOG0510|consensus 100.0 3E-36 6.5E-41 323.1 23.9 305 1-358 62-398 (929)
17 PHA02874 ankyrin repeat protei 100.0 2E-34 4.3E-39 315.2 30.4 278 2-378 3-292 (434)
18 PHA02989 ankyrin repeat protei 100.0 2E-34 4.4E-39 319.9 30.5 257 10-351 13-301 (494)
19 PHA02791 ankyrin-like protein; 100.0 1E-34 2.2E-39 295.3 25.1 214 1-332 31-246 (284)
20 PHA02917 ankyrin-like protein; 100.0 3.9E-34 8.4E-39 323.0 29.1 197 1-216 33-275 (661)
21 PHA03100 ankyrin repeat protei 100.0 9.1E-34 2E-38 314.4 26.3 228 1-336 69-313 (480)
22 PHA02989 ankyrin repeat protei 100.0 4.3E-33 9.2E-38 309.3 28.1 233 1-287 36-301 (494)
23 KOG4412|consensus 100.0 5.7E-34 1.2E-38 255.2 15.1 200 122-358 19-221 (226)
24 KOG4177|consensus 100.0 3E-34 6.6E-39 326.5 16.7 324 2-360 244-629 (1143)
25 PHA02798 ankyrin-like protein; 100.0 9E-33 1.9E-37 306.4 26.9 194 122-350 92-302 (489)
26 KOG4412|consensus 100.0 1.3E-33 2.8E-38 253.0 15.6 206 2-283 5-212 (226)
27 PHA02878 ankyrin repeat protei 100.0 3.8E-32 8.3E-37 300.7 26.5 278 1-357 71-357 (477)
28 KOG4177|consensus 100.0 5E-33 1.1E-37 316.6 16.1 315 1-350 210-584 (1143)
29 PHA02875 ankyrin repeat protei 100.0 3.7E-31 8E-36 287.8 25.9 201 125-359 21-224 (413)
30 KOG0508|consensus 100.0 1E-31 2.2E-36 272.3 17.5 176 1-228 43-235 (615)
31 PHA02798 ankyrin-like protein; 100.0 1.1E-30 2.4E-35 289.7 24.6 252 2-337 38-322 (489)
32 PHA02792 ankyrin-like protein; 100.0 2.8E-30 6.1E-35 281.5 23.1 297 3-348 74-452 (631)
33 PHA02917 ankyrin-like protein; 100.0 1.8E-29 3.8E-34 285.2 28.0 316 13-348 12-405 (661)
34 PHA02730 ankyrin-like protein; 100.0 1.5E-29 3.2E-34 278.8 24.2 299 1-333 78-525 (672)
35 KOG0509|consensus 100.0 3.8E-30 8.3E-35 272.2 17.6 206 3-285 47-255 (600)
36 KOG0509|consensus 100.0 1.2E-29 2.5E-34 268.6 17.2 193 122-349 60-255 (600)
37 KOG0508|consensus 100.0 3.8E-28 8.2E-33 246.4 21.2 213 6-263 10-236 (615)
38 PHA02795 ankyrin-like protein; 100.0 4.1E-27 9E-32 248.3 21.7 224 15-338 64-294 (437)
39 PHA02859 ankyrin repeat protei 99.9 6.7E-27 1.5E-31 229.4 20.0 175 136-347 18-200 (209)
40 PHA02859 ankyrin repeat protei 99.9 5.4E-26 1.2E-30 223.0 20.5 149 135-287 47-204 (209)
41 PHA02792 ankyrin-like protein; 99.9 9E-25 1.9E-29 238.6 24.9 292 2-378 39-447 (631)
42 PHA02795 ankyrin-like protein; 99.9 5.5E-25 1.2E-29 232.3 18.6 187 122-350 65-265 (437)
43 KOG4369|consensus 99.9 3.6E-26 7.8E-31 249.5 9.9 297 1-347 758-1068(2131)
44 KOG0502|consensus 99.9 4.1E-25 8.9E-30 204.1 10.2 185 122-344 112-296 (296)
45 TIGR00870 trp transient-recept 99.9 3.8E-24 8.3E-29 249.1 17.5 237 1-347 18-298 (743)
46 KOG0507|consensus 99.9 4.3E-24 9.4E-29 228.4 15.1 237 3-348 6-263 (854)
47 PLN03192 Voltage-dependent pot 99.9 5.5E-23 1.2E-27 240.9 23.2 194 11-285 505-699 (823)
48 KOG0502|consensus 99.9 3.6E-24 7.8E-29 197.8 5.9 224 4-280 66-296 (296)
49 PLN03192 Voltage-dependent pot 99.9 1.8E-22 4E-27 236.5 21.4 175 136-347 522-697 (823)
50 KOG0507|consensus 99.9 1E-22 2.3E-27 217.9 13.6 210 2-287 51-266 (854)
51 TIGR00870 trp transient-recept 99.9 2.4E-22 5.2E-27 234.0 17.8 207 125-359 36-279 (743)
52 KOG0505|consensus 99.9 2E-22 4.3E-27 209.5 13.9 225 4-348 44-273 (527)
53 KOG0514|consensus 99.9 6.9E-22 1.5E-26 195.4 11.3 155 132-289 261-421 (452)
54 KOG0514|consensus 99.9 2.2E-21 4.7E-26 191.9 11.4 162 26-264 261-429 (452)
55 PHA02743 Viral ankyrin protein 99.8 3.9E-20 8.5E-25 174.7 14.6 148 127-277 8-163 (166)
56 PHA02743 Viral ankyrin protein 99.8 4.1E-20 8.9E-25 174.6 14.7 146 162-341 9-163 (166)
57 KOG4369|consensus 99.8 2.4E-21 5.2E-26 212.2 4.7 279 2-297 792-1082(2131)
58 PHA02884 ankyrin repeat protei 99.8 7.4E-19 1.6E-23 179.1 16.6 145 2-230 35-184 (300)
59 KOG0505|consensus 99.8 2E-19 4.3E-24 187.3 10.8 196 2-284 75-273 (527)
60 PHA02741 hypothetical protein; 99.8 8E-19 1.7E-23 166.4 13.9 135 132-268 14-158 (169)
61 KOG0512|consensus 99.8 1.1E-18 2.3E-23 156.1 12.7 155 176-362 66-220 (228)
62 PHA02741 hypothetical protein; 99.8 2.2E-18 4.8E-23 163.4 14.8 131 168-332 16-158 (169)
63 PHA02736 Viral ankyrin protein 99.8 9.2E-19 2E-23 163.5 11.8 97 205-333 52-153 (154)
64 PHA02736 Viral ankyrin protein 99.8 2E-18 4.3E-23 161.2 10.2 134 132-269 10-153 (154)
65 PHA02884 ankyrin repeat protei 99.8 1.3E-17 2.7E-22 170.1 16.1 141 134-282 27-172 (300)
66 KOG0512|consensus 99.8 1.5E-17 3.2E-22 148.9 13.7 142 4-219 67-209 (228)
67 KOG0195|consensus 99.7 2.5E-17 5.5E-22 158.2 6.7 132 148-282 9-140 (448)
68 KOG0195|consensus 99.7 4.2E-17 9E-22 156.8 7.5 122 125-250 20-141 (448)
69 PF12796 Ank_2: Ankyrin repeat 99.7 4.7E-16 1E-20 130.8 11.3 89 212-336 1-89 (89)
70 KOG3676|consensus 99.7 6.9E-16 1.5E-20 168.4 13.3 188 140-359 102-330 (782)
71 PF12796 Ank_2: Ankyrin repeat 99.6 2.2E-15 4.9E-20 126.6 10.9 89 177-272 1-89 (89)
72 KOG3676|consensus 99.6 2.1E-14 4.5E-19 157.0 16.4 211 2-285 103-367 (782)
73 cd00204 ANK ankyrin repeats; 99.6 4.7E-14 1E-18 125.3 15.0 114 171-287 5-118 (126)
74 cd00204 ANK ankyrin repeats; 99.6 5.4E-14 1.2E-18 124.9 14.7 125 134-262 2-126 (126)
75 KOG4214|consensus 99.4 3.7E-13 8E-18 108.3 8.2 98 177-278 6-103 (117)
76 COG0666 Arp FOG: Ankyrin repea 99.4 4E-12 8.7E-17 125.2 16.4 119 166-287 66-192 (235)
77 KOG4214|consensus 99.4 8.8E-13 1.9E-17 106.1 8.4 105 140-249 3-107 (117)
78 COG0666 Arp FOG: Ankyrin repea 99.4 2.8E-12 6.1E-17 126.3 13.7 132 131-265 65-203 (235)
79 PF13637 Ank_4: Ankyrin repeat 99.3 1.8E-12 4E-17 97.8 6.3 52 1-52 2-53 (54)
80 PTZ00322 6-phosphofructo-2-kin 99.3 6E-12 1.3E-16 143.9 12.6 106 210-347 84-196 (664)
81 PF13857 Ank_5: Ankyrin repeat 99.3 1.8E-12 4E-17 98.5 4.7 56 227-282 1-56 (56)
82 PTZ00322 6-phosphofructo-2-kin 99.3 9.7E-12 2.1E-16 142.2 11.7 106 3-181 85-196 (664)
83 PF13857 Ank_5: Ankyrin repeat 99.3 3.3E-12 7.1E-17 97.1 4.0 55 261-346 1-56 (56)
84 KOG1710|consensus 99.3 2.8E-11 6.2E-16 117.0 10.7 120 1-194 13-133 (396)
85 KOG1710|consensus 99.2 4.4E-11 9.6E-16 115.7 10.5 122 138-262 11-132 (396)
86 PF13637 Ank_4: Ankyrin repeat 99.2 2.7E-11 5.8E-16 91.4 6.3 54 208-262 1-54 (54)
87 KOG4172|consensus 99.1 1.4E-12 3E-17 92.7 -4.4 48 479-526 8-62 (62)
88 KOG0515|consensus 99.1 2.4E-10 5.1E-15 118.7 9.8 102 177-281 554-656 (752)
89 KOG0515|consensus 99.1 2.2E-10 4.7E-15 119.0 9.5 97 131-229 575-673 (752)
90 KOG4275|consensus 99.0 1.1E-10 2.5E-15 112.6 0.2 49 478-526 300-350 (350)
91 PF13920 zf-C3HC4_3: Zinc fing 98.9 9.4E-10 2E-14 81.3 1.8 43 478-520 2-50 (50)
92 KOG0783|consensus 98.7 7.2E-09 1.6E-13 113.0 2.7 79 204-283 48-127 (1267)
93 KOG0783|consensus 98.6 5E-08 1.1E-12 106.6 6.6 97 154-252 33-129 (1267)
94 PF13606 Ank_3: Ankyrin repeat 98.5 1.4E-07 2.9E-12 61.4 4.1 30 241-270 1-30 (30)
95 PF13606 Ank_3: Ankyrin repeat 98.5 1.2E-07 2.7E-12 61.6 3.8 28 1-28 3-30 (30)
96 KOG0818|consensus 98.5 4E-07 8.6E-12 94.5 8.9 84 4-160 137-221 (669)
97 PF00023 Ank: Ankyrin repeat H 98.5 1.9E-07 4E-12 62.5 4.4 33 241-273 1-33 (33)
98 KOG4265|consensus 98.5 3.7E-08 8.1E-13 99.4 1.0 50 476-525 288-343 (349)
99 KOG0506|consensus 98.5 2.3E-07 4.9E-12 96.0 6.0 96 170-267 503-598 (622)
100 KOG0818|consensus 98.4 6.7E-07 1.4E-11 92.9 9.3 95 168-264 122-222 (669)
101 KOG0320|consensus 98.4 6.9E-08 1.5E-12 87.6 1.1 49 479-528 132-187 (187)
102 PF00023 Ank: Ankyrin repeat H 98.4 3.7E-07 8E-12 61.0 4.1 31 1-31 3-33 (33)
103 PF13920 zf-C3HC4_3: Zinc fing 98.3 3.2E-07 6.9E-12 67.7 2.9 43 399-442 3-49 (50)
104 KOG1571|consensus 98.3 1.1E-07 2.5E-12 96.0 -0.1 47 479-525 306-354 (355)
105 KOG0506|consensus 98.3 6.8E-07 1.5E-11 92.5 5.5 81 206-287 504-585 (622)
106 PLN03208 E3 ubiquitin-protein 98.2 6.5E-07 1.4E-11 83.8 3.2 74 474-547 14-110 (193)
107 KOG0782|consensus 98.2 3.7E-06 8.1E-11 88.5 8.5 100 163-263 889-988 (1004)
108 KOG0522|consensus 98.2 3.1E-06 6.8E-11 89.3 7.7 87 142-230 23-110 (560)
109 KOG0782|consensus 98.2 4.4E-06 9.5E-11 88.0 8.2 109 177-287 870-979 (1004)
110 KOG0705|consensus 98.2 4.5E-06 9.7E-11 88.5 8.2 91 177-268 628-720 (749)
111 KOG4172|consensus 98.2 1.5E-07 3.3E-12 67.3 -2.2 46 399-445 8-58 (62)
112 KOG0705|consensus 98.2 5.4E-06 1.2E-10 87.9 8.2 90 212-332 628-720 (749)
113 KOG0522|consensus 98.1 6.1E-06 1.3E-10 87.2 8.0 78 211-288 23-101 (560)
114 KOG4265|consensus 98.1 1.2E-06 2.6E-11 88.7 1.6 48 398-446 290-341 (349)
115 KOG3609|consensus 98.0 1.8E-05 3.8E-10 88.4 8.9 124 138-270 24-159 (822)
116 PF13923 zf-C3HC4_2: Zinc fing 98.0 3.3E-06 7.2E-11 58.7 1.9 33 481-513 1-39 (39)
117 KOG0978|consensus 98.0 2.1E-06 4.6E-11 95.0 0.8 55 465-519 630-690 (698)
118 KOG2164|consensus 98.0 5.3E-06 1.2E-10 87.6 3.7 43 478-520 186-238 (513)
119 KOG1100|consensus 98.0 4.8E-06 1E-10 80.5 3.0 118 401-524 87-206 (207)
120 PF14634 zf-RING_5: zinc-RING 97.9 4.4E-06 9.6E-11 59.7 2.0 36 480-515 1-44 (44)
121 KOG0521|consensus 97.9 1.4E-05 2.9E-10 91.8 7.1 79 240-349 654-732 (785)
122 PHA02929 N1R/p28-like protein; 97.9 6.2E-06 1.3E-10 80.9 3.5 46 476-521 172-230 (238)
123 KOG3609|consensus 97.9 3.8E-05 8.2E-10 85.8 10.0 123 173-334 25-159 (822)
124 PHA02926 zinc finger-like prot 97.9 4.6E-06 1E-10 78.8 0.9 46 476-521 168-233 (242)
125 KOG0521|consensus 97.8 2.3E-05 4.9E-10 90.0 6.5 82 206-288 654-735 (785)
126 KOG4275|consensus 97.8 2.4E-06 5.2E-11 83.2 -1.5 47 399-446 301-347 (350)
127 KOG2384|consensus 97.8 7.4E-05 1.6E-09 69.1 7.3 55 233-287 3-58 (223)
128 KOG0823|consensus 97.8 1.6E-05 3.6E-10 75.8 3.0 52 477-528 46-107 (230)
129 KOG2384|consensus 97.7 9.6E-05 2.1E-09 68.3 7.6 70 129-199 2-72 (223)
130 PF14835 zf-RING_6: zf-RING of 97.7 1.6E-05 3.4E-10 60.0 1.8 46 473-518 2-51 (65)
131 PF15227 zf-C3HC4_4: zinc fing 97.7 2.1E-05 4.5E-10 55.5 2.2 33 481-513 1-42 (42)
132 KOG0511|consensus 97.7 0.00014 3E-09 73.9 8.8 75 209-285 37-111 (516)
133 KOG1571|consensus 97.6 1.3E-05 2.9E-10 81.3 0.5 48 397-445 304-351 (355)
134 PF13639 zf-RING_2: Ring finge 97.6 2.5E-05 5.3E-10 55.9 1.3 35 480-514 2-44 (44)
135 KOG0317|consensus 97.5 3.3E-05 7.1E-10 76.0 1.8 42 479-520 240-286 (293)
136 KOG0520|consensus 97.5 6E-05 1.3E-09 86.1 4.0 130 165-297 566-702 (975)
137 KOG0511|consensus 97.5 0.00024 5.2E-09 72.2 7.3 85 174-264 37-121 (516)
138 TIGR00599 rad18 DNA repair pro 97.5 4.5E-05 9.7E-10 80.4 2.1 49 471-519 19-72 (397)
139 cd00162 RING RING-finger (Real 97.4 0.00011 2.4E-09 52.3 2.7 38 480-517 1-45 (45)
140 PF00097 zf-C3HC4: Zinc finger 97.4 9E-05 2E-09 52.0 1.9 33 481-513 1-41 (41)
141 KOG0824|consensus 97.4 6E-05 1.3E-09 74.4 1.1 43 479-521 8-56 (324)
142 smart00184 RING Ring finger. E 97.3 0.00015 3.3E-09 49.6 2.4 33 481-513 1-39 (39)
143 KOG0520|consensus 97.3 0.00033 7E-09 80.2 6.2 114 204-349 570-690 (975)
144 smart00504 Ubox Modified RING 97.2 0.00028 6E-09 54.7 2.9 41 479-519 2-47 (63)
145 KOG1100|consensus 97.2 0.00012 2.7E-09 70.7 0.9 45 401-446 161-205 (207)
146 COG5574 PEX10 RING-finger-cont 97.1 0.00016 3.5E-09 70.3 1.4 42 478-519 215-263 (271)
147 KOG4692|consensus 97.1 0.00035 7.5E-09 70.1 3.4 60 477-536 421-485 (489)
148 TIGR00570 cdk7 CDK-activating 97.0 0.0003 6.5E-09 71.2 1.9 42 479-520 4-56 (309)
149 COG5432 RAD18 RING-finger-cont 97.0 0.0003 6.6E-09 68.7 1.3 45 475-519 22-71 (391)
150 KOG0287|consensus 96.9 0.0002 4.3E-09 71.5 -0.2 47 474-520 19-70 (442)
151 PF13445 zf-RING_UBOX: RING-ty 96.7 0.00049 1.1E-08 48.6 0.5 26 481-507 1-31 (43)
152 KOG1785|consensus 96.5 0.0011 2.5E-08 67.5 1.5 45 479-523 370-421 (563)
153 KOG2505|consensus 96.3 0.011 2.3E-07 62.7 7.3 72 254-357 403-480 (591)
154 PF14447 Prok-RING_4: Prokaryo 96.3 0.0019 4E-08 47.4 1.1 43 477-519 6-51 (55)
155 KOG2177|consensus 96.2 0.0016 3.4E-08 68.0 0.6 43 472-514 7-54 (386)
156 PF12678 zf-rbx1: RING-H2 zinc 96.2 0.0034 7.4E-08 50.2 2.4 35 480-514 21-73 (73)
157 smart00248 ANK ankyrin repeats 96.2 0.0082 1.8E-07 37.1 3.8 27 1-27 3-29 (30)
158 smart00248 ANK ankyrin repeats 96.1 0.011 2.4E-07 36.4 4.2 28 242-269 2-29 (30)
159 KOG2505|consensus 96.0 0.004 8.7E-08 65.8 2.5 40 2-41 432-471 (591)
160 KOG3002|consensus 95.9 0.0034 7.4E-08 64.1 1.8 41 479-519 49-92 (299)
161 COG5243 HRD1 HRD ubiquitin lig 95.9 0.0046 1E-07 62.8 2.4 43 476-518 285-345 (491)
162 PF13923 zf-C3HC4_2: Zinc fing 95.8 0.0077 1.7E-07 41.6 2.7 35 401-436 1-39 (39)
163 PF04564 U-box: U-box domain; 95.4 0.012 2.6E-07 47.0 2.7 44 477-520 3-52 (73)
164 PF14634 zf-RING_5: zinc-RING 95.3 0.012 2.5E-07 42.0 2.1 37 401-438 2-44 (44)
165 KOG0824|consensus 95.3 0.0073 1.6E-07 60.0 1.1 124 396-521 5-154 (324)
166 KOG0311|consensus 95.0 0.0023 4.9E-08 64.9 -3.2 54 468-521 33-93 (381)
167 KOG4159|consensus 94.9 0.015 3.3E-07 61.6 2.4 48 472-519 78-130 (398)
168 KOG1785|consensus 94.8 0.011 2.3E-07 60.7 0.8 45 400-446 371-421 (563)
169 COG5236 Uncharacterized conser 94.7 0.014 3.1E-07 58.7 1.5 46 476-521 59-111 (493)
170 KOG2879|consensus 94.7 0.017 3.8E-07 56.6 2.0 43 476-518 237-287 (298)
171 KOG1039|consensus 94.7 0.013 2.8E-07 60.8 1.2 46 476-521 159-224 (344)
172 KOG0320|consensus 94.5 0.017 3.6E-07 53.2 1.3 44 399-443 132-180 (187)
173 COG5540 RING-finger-containing 94.5 0.017 3.7E-07 57.3 1.4 40 479-518 324-372 (374)
174 KOG1813|consensus 94.4 0.016 3.4E-07 57.5 1.1 44 479-522 242-290 (313)
175 cd00162 RING RING-finger (Real 94.2 0.039 8.4E-07 38.8 2.5 40 400-440 1-45 (45)
176 PLN03208 E3 ubiquitin-protein 94.2 0.026 5.6E-07 53.4 1.9 42 399-442 19-80 (193)
177 PF12861 zf-Apc11: Anaphase-pr 94.0 0.034 7.4E-07 45.1 2.0 39 480-518 34-82 (85)
178 KOG4692|consensus 94.0 0.043 9.4E-07 55.5 3.2 67 380-449 404-474 (489)
179 PHA02929 N1R/p28-like protein; 94.0 0.047 1E-06 53.9 3.3 47 398-445 174-231 (238)
180 PF13639 zf-RING_2: Ring finge 94.0 0.039 8.5E-07 39.2 2.1 37 400-437 2-44 (44)
181 PF00097 zf-C3HC4: Zinc finger 93.9 0.058 1.3E-06 37.5 2.9 35 401-436 1-41 (41)
182 PF14447 Prok-RING_4: Prokaryo 93.9 0.02 4.4E-07 42.1 0.5 41 400-442 9-51 (55)
183 KOG4739|consensus 93.9 0.031 6.7E-07 54.4 1.8 39 480-518 5-48 (233)
184 COG5152 Uncharacterized conser 93.7 0.02 4.3E-07 53.2 0.2 43 479-521 197-244 (259)
185 KOG0802|consensus 93.5 0.031 6.8E-07 62.9 1.4 43 478-520 291-343 (543)
186 PF07800 DUF1644: Protein of u 93.5 0.042 9.2E-07 49.7 1.9 20 478-497 2-23 (162)
187 PF06128 Shigella_OspC: Shigel 93.3 0.36 7.9E-06 46.4 7.9 113 177-331 157-279 (284)
188 PHA02926 zinc finger-like prot 93.1 0.061 1.3E-06 51.5 2.4 46 399-445 171-234 (242)
189 KOG2231|consensus 93.1 0.031 6.6E-07 62.5 0.4 107 400-519 2-126 (669)
190 KOG0823|consensus 92.5 0.061 1.3E-06 51.9 1.6 42 399-442 48-96 (230)
191 PF15227 zf-C3HC4_4: zinc fing 92.4 0.12 2.6E-06 36.4 2.5 29 401-431 1-29 (42)
192 COG5574 PEX10 RING-finger-cont 92.3 0.064 1.4E-06 52.6 1.4 41 399-441 216-262 (271)
193 smart00184 RING Ring finger. E 92.2 0.11 2.3E-06 35.0 2.1 34 401-436 1-39 (39)
194 PF06128 Shigella_OspC: Shigel 91.7 0.78 1.7E-05 44.2 7.9 118 142-268 156-280 (284)
195 TIGR00570 cdk7 CDK-activating 91.5 0.11 2.3E-06 53.0 2.1 44 400-444 5-57 (309)
196 KOG0317|consensus 91.4 0.063 1.4E-06 53.4 0.2 42 399-442 240-285 (293)
197 KOG2113|consensus 91.3 0.27 5.8E-06 49.3 4.5 43 479-521 344-390 (394)
198 PF14570 zf-RING_4: RING/Ubox 91.0 0.064 1.4E-06 38.6 -0.1 36 481-516 1-46 (48)
199 KOG0978|consensus 90.7 0.06 1.3E-06 60.5 -0.6 40 399-440 644-688 (698)
200 KOG1814|consensus 89.8 0.16 3.4E-06 53.0 1.5 27 479-505 185-215 (445)
201 KOG4628|consensus 89.6 0.17 3.7E-06 52.5 1.6 42 480-521 231-281 (348)
202 TIGR00599 rad18 DNA repair pro 88.7 0.22 4.8E-06 53.0 1.8 42 399-442 27-72 (397)
203 KOG1001|consensus 88.1 0.21 4.6E-06 57.1 1.2 42 479-521 455-503 (674)
204 KOG0297|consensus 88.1 0.25 5.3E-06 53.2 1.6 49 475-523 18-72 (391)
205 KOG0804|consensus 87.3 0.29 6.2E-06 51.6 1.4 44 475-518 172-222 (493)
206 KOG0287|consensus 86.4 0.27 5.9E-06 49.7 0.7 41 400-442 25-69 (442)
207 PF03158 DUF249: Multigene fam 86.3 6 0.00013 37.3 9.3 129 141-287 48-182 (192)
208 COG5236 Uncharacterized conser 86.0 0.7 1.5E-05 46.9 3.3 46 400-447 63-114 (493)
209 KOG2660|consensus 85.9 0.2 4.4E-06 50.8 -0.4 50 472-521 9-64 (331)
210 KOG2164|consensus 85.4 0.43 9.4E-06 51.4 1.7 43 398-442 186-237 (513)
211 PF11929 DUF3447: Domain of un 85.3 3.5 7.5E-05 33.1 6.6 48 175-231 8-55 (76)
212 COG5222 Uncharacterized conser 85.3 0.64 1.4E-05 46.2 2.6 56 460-515 246-318 (427)
213 KOG2879|consensus 85.3 0.67 1.4E-05 45.9 2.8 44 397-441 238-287 (298)
214 KOG0804|consensus 84.6 0.48 1E-05 50.0 1.5 74 400-505 177-256 (493)
215 KOG3039|consensus 84.5 0.66 1.4E-05 45.0 2.3 44 477-520 220-272 (303)
216 PF04641 Rtf2: Rtf2 RING-finge 84.3 0.69 1.5E-05 46.9 2.5 45 476-520 111-163 (260)
217 PF13445 zf-RING_UBOX: RING-ty 84.2 0.82 1.8E-05 32.3 2.1 30 401-431 1-32 (43)
218 KOG1002|consensus 83.8 0.31 6.7E-06 52.1 -0.2 41 478-518 536-586 (791)
219 KOG4367|consensus 83.5 0.48 1E-05 49.4 1.0 33 475-507 1-34 (699)
220 PF03158 DUF249: Multigene fam 83.5 4.1 8.9E-05 38.3 6.9 129 122-263 59-191 (192)
221 KOG0828|consensus 82.5 0.42 9.2E-06 50.8 0.1 44 475-518 568-634 (636)
222 smart00504 Ubox Modified RING 81.4 1.2 2.5E-05 34.1 2.3 40 400-441 3-46 (63)
223 KOG2932|consensus 80.7 0.74 1.6E-05 46.2 1.1 43 479-521 91-137 (389)
224 PF10217 DUF2039: Uncharacteri 80.4 0.16 3.4E-06 41.9 -3.0 41 473-516 50-90 (92)
225 KOG1701|consensus 80.1 0.68 1.5E-05 48.6 0.7 90 401-518 305-405 (468)
226 PF14835 zf-RING_6: zf-RING of 80.0 0.75 1.6E-05 35.2 0.7 40 400-440 9-50 (65)
227 KOG0825|consensus 79.9 0.36 7.7E-06 54.1 -1.5 43 479-521 124-174 (1134)
228 COG5432 RAD18 RING-finger-cont 79.8 0.95 2.1E-05 44.9 1.5 41 400-442 27-71 (391)
229 KOG1734|consensus 79.6 0.75 1.6E-05 45.3 0.7 44 477-520 223-283 (328)
230 KOG4185|consensus 78.3 0.96 2.1E-05 46.8 1.1 38 480-517 5-54 (296)
231 PF11929 DUF3447: Domain of un 77.7 3.3 7.1E-05 33.2 3.9 43 3-52 9-51 (76)
232 PF11789 zf-Nse: Zinc-finger o 76.4 1.6 3.4E-05 33.0 1.5 36 477-512 10-53 (57)
233 KOG3579|consensus 76.2 1.1 2.4E-05 44.3 0.9 27 479-505 269-300 (352)
234 COG5175 MOT2 Transcriptional r 75.2 0.92 2E-05 46.0 -0.0 45 476-520 12-66 (480)
235 KOG3161|consensus 74.0 0.98 2.1E-05 49.7 -0.2 37 478-515 11-54 (861)
236 COG5540 RING-finger-containing 73.9 2.2 4.9E-05 42.8 2.3 41 399-440 324-371 (374)
237 KOG1428|consensus 73.7 1.1 2.4E-05 53.5 0.1 43 478-520 3486-3546(3738)
238 PF10367 Vps39_2: Vacuolar sor 73.6 2.2 4.7E-05 36.6 1.9 42 465-506 65-109 (109)
239 KOG0825|consensus 72.9 2.2 4.7E-05 48.2 2.1 95 399-495 124-233 (1134)
240 PF05290 Baculo_IE-1: Baculovi 72.8 1.3 2.8E-05 39.0 0.3 42 479-520 81-134 (140)
241 PF09788 Tmemb_55A: Transmembr 72.4 4.3 9.3E-05 40.1 3.8 44 399-444 86-139 (256)
242 COG5243 HRD1 HRD ubiquitin lig 71.6 1.8 4E-05 44.5 1.1 42 399-441 288-345 (491)
243 KOG4362|consensus 70.6 2 4.4E-05 48.4 1.3 58 463-520 6-71 (684)
244 KOG3800|consensus 70.4 2 4.4E-05 43.0 1.1 42 400-442 2-52 (300)
245 KOG4739|consensus 70.1 3.5 7.7E-05 40.4 2.7 52 400-453 5-59 (233)
246 KOG1814|consensus 69.9 4.2 9.1E-05 42.8 3.3 31 399-430 185-217 (445)
247 KOG3842|consensus 69.2 5.5 0.00012 40.2 3.7 62 459-523 273-356 (429)
248 KOG2177|consensus 67.4 2.3 4.9E-05 43.9 0.8 38 399-438 14-55 (386)
249 KOG3002|consensus 67.3 3.1 6.7E-05 42.8 1.7 42 399-441 49-91 (299)
250 KOG2114|consensus 66.0 2.2 4.8E-05 48.8 0.4 43 479-521 841-886 (933)
251 PF05883 Baculo_RING: Baculovi 63.7 4.1 8.8E-05 36.3 1.5 43 465-507 11-65 (134)
252 KOG4684|consensus 62.6 7.1 0.00015 37.2 3.0 48 399-447 101-157 (275)
253 PF03854 zf-P11: P-11 zinc fin 61.2 3.9 8.6E-05 29.1 0.8 41 480-521 4-49 (50)
254 PF02318 FYVE_2: FYVE-type zin 61.1 3.6 7.9E-05 36.1 0.8 58 459-516 23-103 (118)
255 KOG1493|consensus 60.9 3.2 6.9E-05 32.8 0.3 39 480-518 33-81 (84)
256 KOG1645|consensus 60.9 3.5 7.6E-05 43.2 0.7 45 477-521 3-59 (463)
257 KOG4628|consensus 60.6 4.3 9.3E-05 42.3 1.3 46 400-445 231-282 (348)
258 KOG3800|consensus 58.6 4.5 9.7E-05 40.6 1.0 40 480-519 2-52 (300)
259 KOG3039|consensus 58.5 7.5 0.00016 38.0 2.4 48 398-446 221-275 (303)
260 PF11793 FANCL_C: FANCL C-term 57.5 3.6 7.7E-05 32.5 0.1 41 479-519 3-67 (70)
261 PF04641 Rtf2: Rtf2 RING-finge 57.0 12 0.00026 37.9 3.8 43 399-442 114-162 (260)
262 KOG1039|consensus 56.3 5.3 0.00012 41.8 1.2 51 397-448 160-228 (344)
263 KOG2231|consensus 56.2 6.3 0.00014 44.6 1.8 42 480-521 2-55 (669)
264 COG5219 Uncharacterized conser 56.1 5.4 0.00012 46.2 1.2 41 479-519 1470-1524(1525)
265 KOG0802|consensus 55.8 4.5 9.9E-05 45.7 0.6 43 399-442 292-342 (543)
266 PHA03096 p28-like protein; Pro 55.0 7.9 0.00017 39.5 2.1 27 479-505 179-214 (284)
267 PF10235 Cript: Microtubule-as 54.4 7.5 0.00016 32.2 1.5 37 479-519 45-81 (90)
268 KOG4159|consensus 54.2 4.7 0.0001 43.1 0.4 45 396-442 82-130 (398)
269 PF02891 zf-MIZ: MIZ/SP-RING z 51.7 10 0.00022 27.7 1.7 38 479-516 3-50 (50)
270 PF07800 DUF1644: Protein of u 51.0 16 0.00034 33.5 3.1 15 432-446 82-96 (162)
271 smart00744 RINGv The RING-vari 50.0 15 0.00032 26.7 2.3 35 480-514 1-49 (49)
272 KOG3799|consensus 49.6 11 0.00023 33.3 1.7 19 476-498 63-83 (169)
273 KOG0827|consensus 49.0 8.8 0.00019 40.1 1.3 41 480-520 6-58 (465)
274 KOG3842|consensus 48.5 9.3 0.0002 38.7 1.4 36 405-442 366-415 (429)
275 PF06906 DUF1272: Protein of u 48.5 12 0.00026 27.8 1.6 30 491-520 21-54 (57)
276 KOG4445|consensus 45.8 5.9 0.00013 39.8 -0.4 43 479-521 116-189 (368)
277 KOG4218|consensus 43.8 12 0.00026 38.4 1.3 25 478-504 15-39 (475)
278 KOG2817|consensus 43.7 13 0.00027 39.2 1.6 30 489-518 349-385 (394)
279 KOG2932|consensus 43.5 6 0.00013 39.9 -0.8 44 400-444 92-137 (389)
280 COG5220 TFB3 Cdk activating ki 43.1 6.9 0.00015 38.0 -0.4 42 400-442 12-65 (314)
281 PF04710 Pellino: Pellino; In 42.5 8.3 0.00018 40.6 0.0 48 478-525 328-408 (416)
282 PF05290 Baculo_IE-1: Baculovi 42.4 14 0.0003 32.8 1.3 43 397-440 79-131 (140)
283 KOG1815|consensus 42.3 37 0.00081 37.3 5.1 31 399-430 71-101 (444)
284 KOG3241|consensus 42.1 0.42 9.1E-06 43.8 -8.2 64 432-521 44-107 (227)
285 PRK14559 putative protein seri 41.5 14 0.00031 42.3 1.7 42 480-521 3-55 (645)
286 PF08084 PROCT: PROCT (NUC072) 40.9 17 0.00038 32.0 1.7 21 539-559 43-63 (125)
287 PF04710 Pellino: Pellino; In 40.3 9.4 0.0002 40.2 0.0 37 405-443 353-403 (416)
288 PF01472 PUA: PUA domain; Int 40.0 9.8 0.00021 30.2 0.1 29 602-633 6-34 (74)
289 TIGR00622 ssl1 transcription f 39.9 15 0.00032 31.8 1.1 37 479-515 56-111 (112)
290 KOG0298|consensus 39.9 7.1 0.00015 47.0 -1.0 37 479-515 1154-1196(1394)
291 COG4306 Uncharacterized protei 39.8 9.6 0.00021 33.1 -0.0 23 499-521 30-53 (160)
292 KOG0230|consensus 39.2 11 0.00025 46.0 0.5 34 411-445 18-55 (1598)
293 KOG2807|consensus 39.2 8.5 0.00018 39.2 -0.5 37 479-515 331-375 (378)
294 COG5220 TFB3 Cdk activating ki 39.0 11 0.00023 36.7 0.2 40 479-518 11-64 (314)
295 KOG0826|consensus 38.5 18 0.0004 37.0 1.7 43 476-518 298-346 (357)
296 PF10272 Tmpp129: Putative tra 38.3 23 0.00049 37.4 2.4 20 477-496 270-291 (358)
297 PF06155 DUF971: Protein of un 36.6 18 0.00038 29.9 1.1 49 507-556 32-80 (89)
298 PF14569 zf-UDP: Zinc-binding 34.7 23 0.0005 28.3 1.4 41 478-518 9-62 (80)
299 KOG0311|consensus 33.5 7.6 0.00017 40.1 -1.8 47 399-446 44-95 (381)
300 PF07975 C1_4: TFIIH C1-like d 33.4 35 0.00077 25.1 2.1 20 495-514 27-50 (51)
301 PF10083 DUF2321: Uncharacteri 33.4 11 0.00025 34.3 -0.6 24 498-521 29-53 (158)
302 COG5194 APC11 Component of SCF 33.2 38 0.00082 27.2 2.3 29 490-518 48-81 (88)
303 KOG1813|consensus 33.1 15 0.00033 37.0 0.2 47 396-444 239-289 (313)
304 KOG1001|consensus 32.7 21 0.00045 41.3 1.2 47 399-448 455-507 (674)
305 COG1592 Rubrerythrin [Energy p 31.5 39 0.00084 31.6 2.5 27 491-520 135-162 (166)
306 KOG2113|consensus 31.3 36 0.00077 34.7 2.4 54 394-448 339-394 (394)
307 KOG4185|consensus 30.6 50 0.0011 34.0 3.6 41 399-440 4-54 (296)
308 KOG4218|consensus 30.3 26 0.00056 36.0 1.3 25 399-428 16-40 (475)
309 PLN02189 cellulose synthase 28.6 49 0.0011 39.7 3.3 41 479-519 35-88 (1040)
310 KOG0801|consensus 27.4 24 0.00051 32.2 0.4 13 477-489 176-188 (205)
311 PF10083 DUF2321: Uncharacteri 27.0 68 0.0015 29.4 3.2 29 420-448 28-57 (158)
312 KOG0298|consensus 25.9 28 0.00061 42.3 0.7 114 399-515 1154-1308(1394)
313 PF05605 zf-Di19: Drought indu 25.1 62 0.0013 23.8 2.3 7 432-438 4-10 (54)
314 PF10764 Gin: Inhibitor of sig 24.8 44 0.00095 24.0 1.3 28 480-507 1-28 (46)
315 PLN02400 cellulose synthase 24.7 65 0.0014 38.9 3.4 41 479-519 37-90 (1085)
316 COG1107 Archaea-specific RecJ- 24.2 57 0.0012 36.3 2.6 44 478-521 53-109 (715)
317 PF10571 UPF0547: Uncharacteri 24.2 39 0.00084 21.0 0.8 13 508-520 1-13 (26)
318 PF07191 zinc-ribbons_6: zinc- 23.5 16 0.00035 28.7 -1.2 38 479-519 2-42 (70)
319 PLN02638 cellulose synthase A 23.2 54 0.0012 39.5 2.4 40 479-518 18-70 (1079)
320 KOG0955|consensus 21.9 60 0.0013 39.2 2.4 64 473-537 214-287 (1051)
321 COG1198 PriA Primosomal protei 21.4 62 0.0013 37.8 2.3 21 410-430 434-454 (730)
322 COG5175 MOT2 Transcriptional r 21.3 46 0.00099 34.2 1.1 43 399-442 15-65 (480)
323 KOG2068|consensus 20.8 66 0.0014 33.3 2.2 43 479-521 250-301 (327)
324 KOG1815|consensus 20.8 39 0.00084 37.1 0.6 30 476-505 68-99 (444)
325 KOG1812|consensus 20.1 34 0.00075 36.7 -0.0 28 478-505 146-178 (384)
326 KOG1595|consensus 20.1 21 0.00045 39.1 -1.6 70 1-142 59-129 (528)
327 PRK00418 DNA gyrase inhibitor; 20.1 35 0.00075 26.2 0.0 22 508-529 7-29 (62)
No 1
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=378.56 Aligned_cols=325 Identities=19% Similarity=0.176 Sum_probs=273.8
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
++|+.|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.++|++| .+|++++.....+.++++.+........
T Consensus 147 ~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~i 226 (682)
T PHA02876 147 KLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDT 226 (682)
T ss_pred HHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHH
Confidence 578889999999999999999999999999999999999999999999999 9999998887777777777665443322
Q ss_pred CCCCCCCCC--------------CCcccccccccccccCCCCCCcccchhhHHHH--------HHHHHhCCCCCCCCCCC
Q psy2733 81 PSNLPKVEP--------------ETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ--------DFVLLRNGCNVNIQDNN 138 (644)
Q Consensus 81 ~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~--------v~~Ll~~gad~n~~d~~ 138 (644)
...+..... ........++...+.+....+..|.||||+|+ +++|++.|++++..|.+
T Consensus 227 vk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~ 306 (682)
T PHA02876 227 IKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIK 306 (682)
T ss_pred HHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCC
Confidence 111110000 01111123445556667777888999999996 77899999999999999
Q ss_pred CCcHHHHHHHcC-CHHHHHHHhcCCCCCccccCCCCCcHHHHHHHc-CCHHHHHHHHHhcCCccCCcCCCCCchHHHHHH
Q psy2733 139 QDTPMHDAVAKG-FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLR-GNMKVTEKILALNRNLATVPKTSDGFTPLHVAC 216 (644)
Q Consensus 139 G~TpL~~A~~~g-~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~ 216 (644)
|.||||+|+..| +.+++++|+. .|++++..+..|.||||+|+.. ++.++++.|++.++++.. .|..|+||||+|+
T Consensus 307 g~TpLh~Aa~~g~~~~~v~~Ll~-~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~--~d~~G~TpLh~Aa 383 (682)
T PHA02876 307 GETPLYLMAKNGYDTENIRTLIM-LGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNA--RDYCDKTPIHYAA 383 (682)
T ss_pred CCCHHHHHHHhCCCHHHHHHHHH-cCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCcc--CCCCCCCHHHHHH
Confidence 999999999999 6999999999 7999999999999999999985 578899999999988766 5688999999999
Q ss_pred hcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccc
Q psy2733 217 FNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQ-TSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITR 295 (644)
Q Consensus 217 ~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~-~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~ 295 (644)
..|+.+++++|++. |++++..+..|.||||+|+..++ ..++++|+++|+++|.+|..|+||||+|+..+.
T Consensus 384 ~~~~~~iv~~Ll~~-gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~-------- 454 (682)
T PHA02876 384 VRNNVVIINTLLDY-GADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNC-------- 454 (682)
T ss_pred HcCCHHHHHHHHHC-CCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCC--------
Confidence 99999999999998 89999999999999999998766 567999999999999999999999999998763
Q ss_pred cCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCcHHHHHHHHh
Q psy2733 296 EKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTSLLNEIMEHA 360 (644)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~~~~ 360 (644)
..+++++|+++||+++.+|..|.|||++|+...++++.++...
T Consensus 455 ----------------------~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~~~~v~~Ll~~~ 497 (682)
T PHA02876 455 ----------------------KLDVIEMLLDNGADVNAINIQNQYPLLIALEYHGIVNILLHYG 497 (682)
T ss_pred ----------------------cHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHCC
Confidence 1579999999999999999999999999998788777776544
No 2
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=4.2e-39 Score=352.04 Aligned_cols=263 Identities=22% Similarity=0.251 Sum_probs=222.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
.||||+|+..|+.++|++|++.|++++..+..|.||||+|+..|+.+++++| ..|++....
T Consensus 36 ~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~------------------ 97 (434)
T PHA02874 36 TTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSIL------------------ 97 (434)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcc------------------
Confidence 3677777777777777777777777777777777777777777777777777 665554320
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHh
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLL 159 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll 159 (644)
. ........++.|++.|++++..+..|.||||+|+..|+.+++++|+
T Consensus 98 ------------------------------~---~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll 144 (434)
T PHA02874 98 ------------------------------P---IPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLF 144 (434)
T ss_pred ------------------------------h---hccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHH
Confidence 0 0001123467899999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC
Q psy2733 160 SHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD 239 (644)
Q Consensus 160 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d 239 (644)
+ .|++++.++..|.||||+|+..|+.+++++|++.+++... .+..|.||||+|+..|+.+++++|++. |++++.++
T Consensus 145 ~-~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~--~~~~g~tpL~~A~~~g~~~iv~~Ll~~-g~~i~~~~ 220 (434)
T PHA02874 145 E-YGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV--KDNNGESPLHNAAEYGDYACIKLLIDH-GNHIMNKC 220 (434)
T ss_pred h-CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCcCCC
Confidence 9 7999999999999999999999999999999999987765 567899999999999999999999998 89999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHH
Q psy2733 240 LKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILL 319 (644)
Q Consensus 240 ~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (644)
..|.||||+|+..+. +.+++|+ .|++++.+|.+|+||||+|+..+. ..
T Consensus 221 ~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~------------------------------~~ 268 (434)
T PHA02874 221 KNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPC------------------------------DI 268 (434)
T ss_pred CCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCC------------------------------cH
Confidence 999999999999865 5666666 699999999999999999998653 15
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcchhhhcCC
Q psy2733 320 AVFLFLVKHGAPLSLENNNRQKPLDLILEDT 350 (644)
Q Consensus 320 ~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~ 350 (644)
+++++|+++|++++.+|..|+|||++|++..
T Consensus 269 ~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~ 299 (434)
T PHA02874 269 DIIDILLYHKADISIKDNKGENPIDTAFKYI 299 (434)
T ss_pred HHHHHHHHCcCCCCCCCCCCCCHHHHHHHhC
Confidence 7999999999999999999999999998655
No 3
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=347.12 Aligned_cols=291 Identities=14% Similarity=0.149 Sum_probs=179.0
Q ss_pred cHHHHHHH--cCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccc
Q psy2733 2 TLLHILAY--QGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKV 78 (644)
Q Consensus 2 TpLh~Aa~--~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~ 78 (644)
++||.++. .++.++|++|+++|+++|.+|.+|+||||+|+..|+.++|++| .+|++++..+..+.++++.+.....
T Consensus 39 ~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~- 117 (446)
T PHA02946 39 HILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDD- 117 (446)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCC-
Confidence 68888764 4578999999999999999999999999999999999999999 9999999855555555554321100
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCC-CCcccchhhHHHH------HHHHHhCCCCCCCCCCCCCcHHHHHHHcC-
Q psy2733 79 QRPSNLPKVEPETPMLNMKFIPRMNEDMLD-TPSAECSGILIKQ------DFVLLRNGCNVNIQDNNQDTPMHDAVAKG- 150 (644)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~L~~a~------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g- 150 (644)
.....++++...+.+... .+..|.|||+.+. +++|++.|++++.+|..|+||||+|+..+
T Consensus 118 ------------~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~ 185 (446)
T PHA02946 118 ------------EVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDN 185 (446)
T ss_pred ------------chHHHHHHHHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcC
Confidence 001112223333333332 3445555555332 55555555555555555555555555433
Q ss_pred -CHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCc-HHHHHH
Q psy2733 151 -FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRG--NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDH-IEIVEL 226 (644)
Q Consensus 151 -~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~-~~~v~~ 226 (644)
+.+++++|++ .|++++.+|.+|.||||+|+..| +.+++++|+. +++++. .|..|.||||+|+..++ .+++++
T Consensus 186 ~~~~~v~~Ll~-~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~--~d~~G~TpLh~A~~~~~~~~~~~~ 261 (446)
T PHA02946 186 PKASTISWMMK-LGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNK--QNKFGDSPLTLLIKTLSPAHLINK 261 (446)
T ss_pred CCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCC--CCCCCCCHHHHHHHhCChHHHHHH
Confidence 2455555555 45555555555555555555543 4555555553 333322 34555555555555554 345555
Q ss_pred HHHhcCCCcc--------------------cC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHc
Q psy2733 227 LVEKYKVNIN--------------------AL-DLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIK 285 (644)
Q Consensus 227 Ll~~~g~~in--------------------~~-d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~ 285 (644)
|++. |..++ .. +..|.||||+|+..|+.+++++|+++|+ +|.||||+|+..
T Consensus 262 Ll~~-g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~-------~~~t~L~~A~~~ 333 (446)
T PHA02946 262 LLST-SNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDI-------ICEDAMYYAVLS 333 (446)
T ss_pred HHhC-CCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCC-------ccccHHHHHHHh
Confidence 5554 33211 11 1234455555555555555555555442 345555555555
Q ss_pred CCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcC
Q psy2733 286 KNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILED 349 (644)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~ 349 (644)
++ .+++++|+.+|+++|.+ .+|.|||++|++.
T Consensus 334 ~~-------------------------------~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~ 365 (446)
T PHA02946 334 EY-------------------------------ETMVDYLLFNHFSVDSV-VNGHTCMSECVRL 365 (446)
T ss_pred CH-------------------------------HHHHHHHHHCCCCCCCc-cccccHHHHHHHc
Confidence 54 78999999999999996 5899999999943
No 4
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=5.2e-38 Score=347.57 Aligned_cols=271 Identities=20% Similarity=0.245 Sum_probs=247.2
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcC---CHHHHHHH-hhccCCCccchhhhhhhhhccccccccC
Q psy2733 5 HILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGN---KPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 5 h~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g---~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
..|+..+++++|++|++.|++++.++..|.||||+|+..+ +.+++++| ..|++++.
T Consensus 19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~-------------------- 78 (471)
T PHA03095 19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNA-------------------- 78 (471)
T ss_pred HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCC--------------------
Confidence 4577889999999999999999999999999999999998 99999999 99999988
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH--------HHHHHhCCCCCCCCCCCCCcHHHHHH--HcC
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ--------DFVLLRNGCNVNIQDNNQDTPMHDAV--AKG 150 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~--------v~~Ll~~gad~n~~d~~G~TpL~~A~--~~g 150 (644)
.+..|.||||+|+ +++|+++|+++|.+|..|.||||+|+ ..+
T Consensus 79 ----------------------------~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~ 130 (471)
T PHA03095 79 ----------------------------PERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNI 130 (471)
T ss_pred ----------------------------CCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcC
Confidence 7778999999885 88999999999999999999999999 556
Q ss_pred CHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhc--CcHHHHHH
Q psy2733 151 FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRG--NMKVTEKILALNRNLATVPKTSDGFTPLHVACFN--DHIEIVEL 226 (644)
Q Consensus 151 ~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~--g~~~~v~~ 226 (644)
+.+++++|++ .|++++..+..|.||||+|+..+ +.++++.|++.|++.... +..|+||||+|+.. ++.++++.
T Consensus 131 ~~~iv~~Ll~-~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~--d~~g~t~Lh~~~~~~~~~~~i~~~ 207 (471)
T PHA03095 131 NPKVIRLLLR-KGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAV--DDRFRSLLHHHLQSFKPRARIVRE 207 (471)
T ss_pred CHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHHCCCcHHHHHH
Confidence 8999999999 79999999999999999999876 689999999999988764 68999999999875 78899999
Q ss_pred HHHhcCCCcccCCCCCCCHHHHHHHcCCH--HHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHh
Q psy2733 227 LVEKYKVNINALDLKKRTPLMAAVGQGQT--SVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEE 304 (644)
Q Consensus 227 Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~--~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~ 304 (644)
|++. |++++.+|..|+||||+|+..|+. .+++.|++.|+++|.+|..|+||||+|+..++
T Consensus 208 Ll~~-g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~----------------- 269 (471)
T PHA03095 208 LIRA-GCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNN----------------- 269 (471)
T ss_pred HHHc-CCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-----------------
Confidence 9998 899999999999999999999975 68899999999999999999999999999988
Q ss_pred hhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCc--HHHHHHH
Q psy2733 305 YLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTS--LLNEIME 358 (644)
Q Consensus 305 ~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~--~~~~l~~ 358 (644)
.+++++|+++||+++.+|.+|+|||++|+..++ +++.++.
T Consensus 270 --------------~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~ 311 (471)
T PHA03095 270 --------------PRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALA 311 (471)
T ss_pred --------------HHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 679999999999999999999999999995543 3444443
No 5
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=8.1e-38 Score=360.59 Aligned_cols=355 Identities=15% Similarity=0.133 Sum_probs=216.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC-CcccCCCCCcHHHHHHhcCCHH-------------------------------H
Q psy2733 1 KTLLHILAYQGCVEELNILLARGAC-VYYPDDAGDTALHYAAFGNKPD-------------------------------A 48 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~-~n~~d~~G~TpLh~Aa~~g~~e-------------------------------i 48 (644)
+||||+|++.|+.|+|++|++.+.+ ++..|..|.||||+|+..++.. +
T Consensus 42 ~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (682)
T PHA02876 42 FTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEAC 121 (682)
T ss_pred chHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHHH
Confidence 5899999999999999999999887 5778889999999888554421 0
Q ss_pred HHHH-h--hccCCCccchhh----hhhhhhccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH
Q psy2733 49 IQIN-S--HVSGANRSRKHI----YKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ 121 (644)
Q Consensus 49 v~lL-~--~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~ 121 (644)
+..| . .+.++....... .+.+..+... ......+++...+.++...+..|.||||+|+
T Consensus 122 ~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---------------~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa 186 (682)
T PHA02876 122 IHILKEAISGNDIHYDKINESIEYMKLIKERIQQ---------------DELLIAEMLLEGGADVNAKDIYCITPIHYAA 186 (682)
T ss_pred HHHHHHHhcCCcccHHhhccchhhhHHHHHHHHC---------------CcHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Confidence 1111 0 000000000000 0000010000 0112234445555555556666777777774
Q ss_pred -------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH-----------------------------HhcCCCCC
Q psy2733 122 -------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLL-----------------------------LLSHPEVN 165 (644)
Q Consensus 122 -------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~-----------------------------Ll~~~~~~ 165 (644)
+++|+++|++++..+.+|.||||+|+..|+.+++++ |++ .|++
T Consensus 187 ~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~-~g~~ 265 (682)
T PHA02876 187 ERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYD-AGFS 265 (682)
T ss_pred HCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHH-CCCC
Confidence 777777777777777777777777766666555443 334 5666
Q ss_pred ccccCCCCCcHHHHHHHcCCH-HHHHHHHHhcCCccCCcCCCCCchHHHHHHhcC-cHHHHHHHHHhcCCCcccCCCCCC
Q psy2733 166 LYLENSKGFNILNYAVLRGNM-KVTEKILALNRNLATVPKTSDGFTPLHVACFND-HIEIVELLVEKYKVNINALDLKKR 243 (644)
Q Consensus 166 ~~~~d~~g~tpL~~A~~~g~~-~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g-~~~~v~~Ll~~~g~~in~~d~~G~ 243 (644)
++..+..|.||||+|+..|+. ++++.|++.++++.. .|..|.||||+|+..| ..+++++|+.. |++++..|..|.
T Consensus 266 vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~--~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~-gadin~~d~~g~ 342 (682)
T PHA02876 266 VNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNA--KNIKGETPLYLMAKNGYDTENIRTLIML-GADVNAADRLYI 342 (682)
T ss_pred CCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHhCCCHHHHHHHHHc-CCCCCCcccCCC
Confidence 666677777777777777664 466667776666544 4456777777777766 46677777666 677777777777
Q ss_pred CHHHHHHHc-CCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCC--C-CccchHH
Q psy2733 244 TPLMAAVGQ-GQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGP--S-NEHGILL 319 (644)
Q Consensus 244 TpL~~Aa~~-g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ 319 (644)
||||+|+.. ++.+++++|++.|++++.+|..|+||||+|+..++.++++.+.+.+..+........+. . .......
T Consensus 343 TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~ 422 (682)
T PHA02876 343 TPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPY 422 (682)
T ss_pred cHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHH
Confidence 777777664 35667777777777777777777777777777776665555554443322111000000 0 0001124
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcchhhhcCC---cHHHHHHHHhhhhccccCccccchhhhh
Q psy2733 320 AVFLFLVKHGAPLSLENNNRQKPLDLILEDT---SLLNEIMEHAREYVTDLTNENNKVVTAI 378 (644)
Q Consensus 320 ~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 378 (644)
.++++|+++|+++|.+|.+|+||||+|+..+ ++++.|+.. ..+....+..+.+++
T Consensus 423 ~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~----Gad~n~~d~~g~tpl 480 (682)
T PHA02876 423 MSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDN----GADVNAINIQNQYPL 480 (682)
T ss_pred HHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHC----CCCCCCCCCCCCCHH
Confidence 5789999999999999999999999999644 344444443 334444444443443
No 6
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=2.9e-37 Score=345.91 Aligned_cols=265 Identities=17% Similarity=0.189 Sum_probs=183.1
Q ss_pred HcCCHHHHHHHHHCC-CCCccc-CCCCCcHHHHHHh--cCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCC
Q psy2733 9 YQGCVEELNILLARG-ACVYYP-DDAGDTALHYAAF--GNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSN 83 (644)
Q Consensus 9 ~~G~~e~vk~LL~~G-a~~n~~-d~~G~TpLh~Aa~--~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (644)
+.++.++|++|++.| +++|.+ |..|.||||+|+. .++.+++++| .+|++++.
T Consensus 151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~----------------------- 207 (764)
T PHA02716 151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNL----------------------- 207 (764)
T ss_pred cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCC-----------------------
Confidence 457888999999998 888888 8888999998764 3567888888 88888877
Q ss_pred CCCCCCCCcccccccccccccCCCCCCcccchhhHHHH---------HHHHHhCCCCCCCCCCCCCcHHHHHH-------
Q psy2733 84 LPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ---------DFVLLRNGCNVNIQDNNQDTPMHDAV------- 147 (644)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~---------v~~Ll~~gad~n~~d~~G~TpL~~A~------- 147 (644)
.+..|.||||+|+ +++|+++|+++|.+|..|+||||+|+
T Consensus 208 -------------------------kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~ 262 (764)
T PHA02716 208 -------------------------QNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNIN 262 (764)
T ss_pred -------------------------CCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccC
Confidence 6777788887774 67788888888888888888888653
Q ss_pred ------------------------------HcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHH--cCCHHHHHHHHHh
Q psy2733 148 ------------------------------AKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVL--RGNMKVTEKILAL 195 (644)
Q Consensus 148 ------------------------------~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~--~g~~~~v~~Ll~~ 195 (644)
+.|+.+++++|++ .|++++.+|..|.||||+|+. .++.+++++|++.
T Consensus 263 ~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe-~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~ 341 (764)
T PHA02716 263 PEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQ-PGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEY 341 (764)
T ss_pred HHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHh-CCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHc
Confidence 3455666666666 566666666666666666553 3456666666666
Q ss_pred cCCccCCcCCCCCchHHHHHHh--------------cCcHHHHHHHHHhcCCCcccCCCCCCCHHHH----HHHcCCHHH
Q psy2733 196 NRNLATVPKTSDGFTPLHVACF--------------NDHIEIVELLVEKYKVNINALDLKKRTPLMA----AVGQGQTSV 257 (644)
Q Consensus 196 ~~~~~~~~~d~~g~T~Lh~A~~--------------~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~----Aa~~g~~~i 257 (644)
|+++.. .|..|+||||+|+. .++.+++++|+++ |++++.+|..|+||||. |...++.++
T Consensus 342 GADIN~--kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~-GADIn~kn~~G~TPLh~y~~~a~n~~~~dI 418 (764)
T PHA02716 342 GNDLNE--PDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISL-GADITAVNCLGYTPLTSYICTAQNYMYYDI 418 (764)
T ss_pred CCCCcc--CCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHC-CCCCCCcCCCCCChHHHHHHHHHhcChHHH
Confidence 665543 44566666666543 2456666666665 56666666666666662 122345566
Q ss_pred HHHHHHCCC-------------------------------------------------------------CCCcccCCCC
Q psy2733 258 INYLMLRDV-------------------------------------------------------------ALDIQDIDGN 276 (644)
Q Consensus 258 v~~Ll~~ga-------------------------------------------------------------dvn~~d~~G~ 276 (644)
+++|++.|+ ++|.+|..|+
T Consensus 419 vklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~ 498 (764)
T PHA02716 419 IDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGM 498 (764)
T ss_pred HHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCC
Confidence 666655432 1233455566
Q ss_pred cHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCc
Q psy2733 277 GLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTS 351 (644)
Q Consensus 277 T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~ 351 (644)
||||+|+..++.. ....+++++|+++||++|.+|.+|+||||+|+++++
T Consensus 499 TPLh~Aa~~g~~~--------------------------~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~ 547 (764)
T PHA02716 499 TPLHVSIISHTNA--------------------------NIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNR 547 (764)
T ss_pred CHHHHHHHcCCcc--------------------------chhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCC
Confidence 6666666555421 011367799999999999999999999999997663
No 7
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.4e-37 Score=341.88 Aligned_cols=239 Identities=28% Similarity=0.444 Sum_probs=153.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHH-----HHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHY-----AAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTT 75 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~-----Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~ 75 (644)
.||||+|+..|+.++|++|++.|++++..+..|.||||+ |+..++.+++++
T Consensus 36 ~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~------------------------ 91 (480)
T PHA03100 36 VLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKL------------------------ 91 (480)
T ss_pred chhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHH------------------------
Confidence 367777777777777777777777777777777777777 777777777776
Q ss_pred ccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHH--HcCCHH
Q psy2733 76 EKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAV--AKGFEE 153 (644)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~--~~g~~~ 153 (644)
|+++|++++..|..|.||||+|+ ..|+.+
T Consensus 92 -------------------------------------------------Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~ 122 (480)
T PHA03100 92 -------------------------------------------------LLEYGANVNAPDNNGITPLLYAISKKSNSYS 122 (480)
T ss_pred -------------------------------------------------HHHCCCCCCCCCCCCCchhhHHHhcccChHH
Confidence 55555555555666666666666 666666
Q ss_pred HHHHHhcCCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhc
Q psy2733 154 IQLLLLSHPEVNLYLENSKGFNILNYAVLRG--NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKY 231 (644)
Q Consensus 154 iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~ 231 (644)
++++|++ .|++++..+..|.||||+|+..| +.++++.|++.|+++.. .+..|.||||+|+..|+.+++++|++.
T Consensus 123 iv~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~--~d~~g~tpL~~A~~~~~~~iv~~Ll~~- 198 (480)
T PHA03100 123 IVEYLLD-NGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINA--KNRYGYTPLHIAVEKGNIDVIKFLLDN- 198 (480)
T ss_pred HHHHHHH-cCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc--ccCCCCCHHHHHHHhCCHHHHHHHHHc-
Confidence 6666666 45666666666666666666666 56666666666655443 334566666666666666666666655
Q ss_pred CCCcccCCCCC------CCHHHHHHHcCC--HHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHH
Q psy2733 232 KVNINALDLKK------RTPLMAAVGQGQ--TSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYE 303 (644)
Q Consensus 232 g~~in~~d~~G------~TpL~~Aa~~g~--~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~ 303 (644)
|++++..+..| .||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+..++
T Consensus 199 ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~---------------- 262 (480)
T PHA03100 199 GADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNN---------------- 262 (480)
T ss_pred CCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC----------------
Confidence 56666665555 566666666666 666666666666666666666666666666555
Q ss_pred hhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhh
Q psy2733 304 EYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 304 ~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~ 347 (644)
.+++++|+++|+|++.+|..|.|||++|+
T Consensus 263 ---------------~~iv~~Ll~~gad~n~~d~~g~tpl~~A~ 291 (480)
T PHA03100 263 ---------------PEFVKYLLDLGANPNLVNKYGDTPLHIAI 291 (480)
T ss_pred ---------------HHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence 44666666666666666666666666665
No 8
>KOG0510|consensus
Probab=100.00 E-value=1.9e-37 Score=332.33 Aligned_cols=296 Identities=23% Similarity=0.288 Sum_probs=260.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
.||||+|++....+.+++|++.|++++.++.++.+|||+|+..|+.++.++| .++++++..+..+.++++.+.......
T Consensus 89 n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E 168 (929)
T KOG0510|consen 89 NTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVE 168 (929)
T ss_pred CchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHH
Confidence 4899999999999999999999999999999999999999999999999999 889999998888888888777654432
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHh-----CCCCCCCCCCCCCcHHHHHH
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLR-----NGCNVNIQDNNQDTPMHDAV 147 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~-----~gad~n~~d~~G~TpL~~A~ 147 (644)
..+.+...+.+....+..++.++|.++ .++.+. .+..+|..+..|.||||.|+
T Consensus 169 ---------------~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAv 233 (929)
T KOG0510|consen 169 ---------------AKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAV 233 (929)
T ss_pred ---------------HHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhh
Confidence 223455666777778999999999996 777777 77889999999999999999
Q ss_pred HcCCHHHHHHHhcCCCCC---------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHH
Q psy2733 148 AKGFEEIQLLLLSHPEVN---------------LYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPL 212 (644)
Q Consensus 148 ~~g~~~iv~~Ll~~~~~~---------------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~L 212 (644)
..|+.++++.+|+. +.. ++..|++|.||||+|++.|+.+.+..|+..|+++.. ++.++.|||
T Consensus 234 e~g~~e~lk~~L~n-~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~--kn~d~~spL 310 (929)
T KOG0510|consen 234 EGGDIEMLKMCLQN-GKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINS--KNKDEESPL 310 (929)
T ss_pred hcCCHHHHHHHHhC-ccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccc--cCCCCCCch
Confidence 99999999999984 322 345688999999999999999999999999998877 557899999
Q ss_pred HHHHhcCcHHHHHHHHH-hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---cccCCCCcHHHHHHHcCCc
Q psy2733 213 HVACFNDHIEIVELLVE-KYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALD---IQDIDGNGLLHFLFIKKNF 288 (644)
Q Consensus 213 h~A~~~g~~~~v~~Ll~-~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn---~~d~~G~T~Lh~A~~~~~~ 288 (644)
|.||+.|+.++|+.||+ ..-...|..|..|+||||+|++.|+.+++++|+++|++.. ..|.+|+||||+|+..|+
T Consensus 311 H~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~- 389 (929)
T KOG0510|consen 311 HFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGN- 389 (929)
T ss_pred HHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhcc-
Confidence 99999999999999998 4446788999999999999999999999999999999987 569999999999999999
Q ss_pred ccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchh
Q psy2733 289 YKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDL 345 (644)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~ 345 (644)
..+++.|+.+||+++.+|+.|.|++++
T Consensus 390 ------------------------------~~av~~Li~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 390 ------------------------------TSAVQKLISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred ------------------------------HHHHHHHHHcCCceeeccccccccccc
Confidence 569999999999999999999999995
No 9
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=6.7e-37 Score=338.69 Aligned_cols=254 Identities=20% Similarity=0.221 Sum_probs=232.7
Q ss_pred CcHHHHHHHcC---CHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcC-CHHHHHHH-hhccCCCccchhhhhhhhhcccc
Q psy2733 1 KTLLHILAYQG---CVEELNILLARGACVYYPDDAGDTALHYAAFGN-KPDAIQIN-SHVSGANRSRKHIYKERHRTVTT 75 (644)
Q Consensus 1 ~TpLh~Aa~~G---~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g-~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~ 75 (644)
+||||+|+..| +.+++++|++.|+++|.+|..|+||||+|+..| +.+++++| ..|++++.
T Consensus 48 ~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~--------------- 112 (471)
T PHA03095 48 KTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNA--------------- 112 (471)
T ss_pred CCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCC---------------
Confidence 59999999999 999999999999999999999999999999999 59999999 99999988
Q ss_pred ccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH---------HHHHHhCCCCCCCCCCCCCcHHHHH
Q psy2733 76 EKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ---------DFVLLRNGCNVNIQDNNQDTPMHDA 146 (644)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~---------v~~Ll~~gad~n~~d~~G~TpL~~A 146 (644)
.+..|.||||+++ +++|+++|++++..|..|.||||+|
T Consensus 113 ---------------------------------~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a 159 (471)
T PHA03095 113 ---------------------------------KDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVL 159 (471)
T ss_pred ---------------------------------CCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 7778888888875 8899999999999999999999999
Q ss_pred HHcC--CHHHHHHHhcCCCCCccccCCCCCcHHHHHHHc--CCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcH-
Q psy2733 147 VAKG--FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLR--GNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHI- 221 (644)
Q Consensus 147 ~~~g--~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~--g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~- 221 (644)
+..+ +.+++++|++ .|++++..+..|.||||+|+.. ++.++++.|++.|+++.. .|..|+||||+|+..|+.
T Consensus 160 ~~~~~~~~~iv~~Ll~-~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~--~d~~g~tpLh~Aa~~~~~~ 236 (471)
T PHA03095 160 LKSRNANVELLRLLID-AGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAA--TDMLGNTPLHSMATGSSCK 236 (471)
T ss_pred HHcCCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHhcCCch
Confidence 9876 6899999999 7999999999999999999975 788999999999998766 678999999999999874
Q ss_pred -HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCch
Q psy2733 222 -EIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVP 300 (644)
Q Consensus 222 -~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~ 300 (644)
.+++.|+.. |+++|.+|..|+||||+|+..|+.+++++|++.|+|++.+|.+|+||||+|+..++
T Consensus 237 ~~~v~~ll~~-g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~------------- 302 (471)
T PHA03095 237 RSLVLPLLIA-GISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNN------------- 302 (471)
T ss_pred HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCC-------------
Confidence 578888887 89999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCC
Q psy2733 301 IYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENN 337 (644)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~ 337 (644)
.+++++|+++|++++....
T Consensus 303 ------------------~~~v~~LL~~~~~~~~~~~ 321 (471)
T PHA03095 303 ------------------GRAVRAALAKNPSAETVAA 321 (471)
T ss_pred ------------------HHHHHHHHHhCCCHHHHHH
Confidence 5678888888877654433
No 10
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=330.24 Aligned_cols=261 Identities=16% Similarity=0.123 Sum_probs=220.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCC--HHHHHHH-hhccCCCc-cchhhhhhhhhccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNK--PDAIQIN-SHVSGANR-SRKHIYKERHRTVTTE 76 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~--~eiv~lL-~~~a~~~~-~~~~~~~~~~~~~~~~ 76 (644)
+||||+||..|+.++|++|+++|++++.+|..|+||||+|+..++ .+++++| .+|++++. .+..+.++++.+..
T Consensus 73 ~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~-- 150 (446)
T PHA02946 73 NYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTD-- 150 (446)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHHHHHC--
Confidence 699999999999999999999999999999999999999998764 7899999 99999985 35555666542210
Q ss_pred cccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH---------HHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy2733 77 KVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ---------DFVLLRNGCNVNIQDNNQDTPMHDAV 147 (644)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~---------v~~Ll~~gad~n~~d~~G~TpL~~A~ 147 (644)
.....++++...+.+....+..|.||||+++ +++|+++|++++.+|.+|.||||+|+
T Consensus 151 --------------~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa 216 (446)
T PHA02946 151 --------------PSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVC 216 (446)
T ss_pred --------------CChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 1112234455566777778999999999874 88999999999999999999999999
Q ss_pred HcC--CHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCC-HHHHHHHHHhcCCccC-------------------CcCC
Q psy2733 148 AKG--FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGN-MKVTEKILALNRNLAT-------------------VPKT 205 (644)
Q Consensus 148 ~~g--~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~-~~~v~~Ll~~~~~~~~-------------------~~~d 205 (644)
..| +.+++++|+. +++++.+|..|.||||+|+..++ .++++.|++.++.... ...+
T Consensus 217 ~~~~~~~~iv~lLl~--gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~ 294 (446)
T PHA02946 217 SKTVKNVDIINLLLP--STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGK 294 (446)
T ss_pred HcCCCcHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCc
Confidence 986 8899999985 79999999999999999999988 5899999988754211 1112
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHc
Q psy2733 206 SDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIK 285 (644)
Q Consensus 206 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~ 285 (644)
..|.||||+|+..|+.+++++|+++ | ..|.||||+|+..|+.+++++|+.+|+++|.+ .+|.||||+|+..
T Consensus 295 ~~~~TpLh~Aa~~g~~eivk~Ll~~-~-------~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~ 365 (446)
T PHA02946 295 QYDSTDFKMAVEVGSIRCVKYLLDN-D-------IICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSECVRL 365 (446)
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHC-C-------CccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHHHHHc
Confidence 3578999999999999999999987 3 25799999999999999999999999999996 6899999999999
Q ss_pred CCc
Q psy2733 286 KNF 288 (644)
Q Consensus 286 ~~~ 288 (644)
++.
T Consensus 366 ~~~ 368 (446)
T PHA02946 366 NNP 368 (446)
T ss_pred CCH
Confidence 993
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=336.46 Aligned_cols=226 Identities=22% Similarity=0.207 Sum_probs=127.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
.||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++| ..+...+.
T Consensus 38 ~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~------------------- 98 (477)
T PHA02878 38 FIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV------------------- 98 (477)
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc-------------------
Confidence 3899999999999999999999999999999999999999999999999998 55443322
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcC--
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKG-- 150 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g-- 150 (644)
..+.++++.++ ++.|+..+.+.+... ....+..+...+
T Consensus 99 -------------------------------~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~--~~~~~~~~~~~~~~ 145 (477)
T PHA02878 99 -------------------------------FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTI--DLVYIDKKSKDDII 145 (477)
T ss_pred -------------------------------ccchhhHHHHHHcCCHHHHHHHHhCcccCcccC--cHHHHhhccchhhH
Confidence 11222333332 344444332211100 000000000111
Q ss_pred CHHHHHHHhcCCCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHH
Q psy2733 151 FEEIQLLLLSHPEVNLYLENSK-GFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVE 229 (644)
Q Consensus 151 ~~~iv~~Ll~~~~~~~~~~d~~-g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~ 229 (644)
..+++++|++ .|++++..+.. |.||||+|+..|+.++++.|++.|+++.. .|..|+||||+|+..|+.+++++|++
T Consensus 146 ~~~iv~~Ll~-~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~--~d~~g~tpLh~A~~~~~~~iv~~Ll~ 222 (477)
T PHA02878 146 EAEITKLLLS-YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNI--PDKTNNSPLHHAVKHYNKPIVHILLE 222 (477)
T ss_pred HHHHHHHHHH-cCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 1235555555 45555555544 55555555555555555555555544433 33445555555555555555555555
Q ss_pred hcCCCcccCCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCcccC-CCCcHHHHH
Q psy2733 230 KYKVNINALDLKKRTPLMAAVGQ-GQTSVINYLMLRDVALDIQDI-DGNGLLHFL 282 (644)
Q Consensus 230 ~~g~~in~~d~~G~TpL~~Aa~~-g~~~iv~~Ll~~gadvn~~d~-~G~T~Lh~A 282 (644)
. |++++.+|..|.||||+|+.. ++.+++++|+++|++++.++. .|.||||+|
T Consensus 223 ~-ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A 276 (477)
T PHA02878 223 N-GASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS 276 (477)
T ss_pred c-CCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH
Confidence 4 455555555555555555543 345555555555555555543 455555555
No 12
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=2.5e-36 Score=338.33 Aligned_cols=292 Identities=14% Similarity=0.117 Sum_probs=195.0
Q ss_pred CcHHHHHHH--cCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCC--HHHHHHH-hhccCCCccchhhhhhhhhcccc
Q psy2733 1 KTLLHILAY--QGCVEELNILLARGACVYYPDDAGDTALHYAAFGNK--PDAIQIN-SHVSGANRSRKHIYKERHRTVTT 75 (644)
Q Consensus 1 ~TpLh~Aa~--~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~--~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~ 75 (644)
+||||+|+. +|+.+++++|+++|++++.+|..|+||||+|+..|+ .++|++| ..|++++..+..+.++++.++..
T Consensus 178 ~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~ 257 (764)
T PHA02716 178 YGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIIN 257 (764)
T ss_pred CcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 589999865 468999999999999999999999999999999995 4899999 99999999999999988866432
Q ss_pred ccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhH----------HHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy2733 76 EKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGIL----------IKQDFVLLRNGCNVNIQDNNQDTPMHD 145 (644)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~----------~a~v~~Ll~~gad~n~~d~~G~TpL~~ 145 (644)
....... ..+.+....... ........++ ..+++.|++.|+++|.+|..|+||||+
T Consensus 258 a~n~~~E------------IvkiLie~~d~n--~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~ 323 (764)
T PHA02716 258 IDNINPE------------ITNIYIESLDGN--KVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQ 323 (764)
T ss_pred hhccCHH------------HHHHHHHhcccc--ccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHH
Confidence 1000000 000000000000 0000001111 112556666666666666666666666
Q ss_pred HHH--cCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHH--------------cCCHHHHHHHHHhcCCccCCcCCCCCc
Q psy2733 146 AVA--KGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVL--------------RGNMKVTEKILALNRNLATVPKTSDGF 209 (644)
Q Consensus 146 A~~--~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~--------------~g~~~~v~~Ll~~~~~~~~~~~d~~g~ 209 (644)
|+. .++.+++++|++ .|++++.+|..|+||||+|+. .++.++++.|++.|+++.. .+..|+
T Consensus 324 Aaa~~~~~~eIVklLLe-~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~--kn~~G~ 400 (764)
T PHA02716 324 YILRHNISTDIIKLLHE-YGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITA--VNCLGY 400 (764)
T ss_pred HHHHhCCCchHHHHHHH-cCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCC--cCCCCC
Confidence 543 235566666666 566666666666666666543 2455666666666655544 445566
Q ss_pred hHHHHH----HhcCcHHHHHHHHHhc------------------------------------------------------
Q psy2733 210 TPLHVA----CFNDHIEIVELLVEKY------------------------------------------------------ 231 (644)
Q Consensus 210 T~Lh~A----~~~g~~~~v~~Ll~~~------------------------------------------------------ 231 (644)
||||.| ...++.+++++|++..
T Consensus 401 TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 480 (764)
T PHA02716 401 TPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVY 480 (764)
T ss_pred ChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhh
Confidence 666621 1234455555554421
Q ss_pred ------CCCcccCCCCCCCHHHHHHHcCCH-----HHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCch
Q psy2733 232 ------KVNINALDLKKRTPLMAAVGQGQT-----SVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVP 300 (644)
Q Consensus 232 ------g~~in~~d~~G~TpL~~Aa~~g~~-----~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~ 300 (644)
+.++|..|..|+||||+|+..|+. +++++|++.|+++|.+|.+|+||||+|+.+++.+
T Consensus 481 ~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~----------- 549 (764)
T PHA02716 481 HCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLS----------- 549 (764)
T ss_pred HHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCcc-----------
Confidence 234566788999999999999886 4559999999999999999999999999999732
Q ss_pred hHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCC
Q psy2733 301 IYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLE 335 (644)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~ 335 (644)
....+++++|+++|++++..
T Consensus 550 ---------------~~~~eIvk~LL~~ga~~~~~ 569 (764)
T PHA02716 550 ---------------GHQWYIVKNILDKRPNVDIV 569 (764)
T ss_pred ---------------ccHHHHHHHHHhcCCCcchH
Confidence 11247999999999998876
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=4e-36 Score=326.75 Aligned_cols=239 Identities=21% Similarity=0.295 Sum_probs=221.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+++||.|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~----------------------------- 53 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKL----------------------------- 53 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHH-----------------------------
Confidence 689999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++..+.+|.||||+|+..|+.+++++|++
T Consensus 54 --------------------------------------------Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~ 89 (413)
T PHA02875 54 --------------------------------------------LMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLD 89 (413)
T ss_pred --------------------------------------------HHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHH
Confidence 777888888888899999999999999999999999
Q ss_pred CCCCCc-cccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC
Q psy2733 161 HPEVNL-YLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD 239 (644)
Q Consensus 161 ~~~~~~-~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d 239 (644)
.|... +..+..|.||||+|+..|+.++++.|++.|+++.. .+..|.||||+|+..|+.+++++|++. |++++.+|
T Consensus 90 -~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~--~~~~g~tpLh~A~~~~~~~~v~~Ll~~-g~~~~~~d 165 (413)
T PHA02875 90 -LGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDI--PNTDKFSPLHLAVMMGDIKGIELLIDH-KACLDIED 165 (413)
T ss_pred -cCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCCC
Confidence 55544 45577899999999999999999999999998765 557899999999999999999999998 89999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCC-cHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchH
Q psy2733 240 LKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGN-GLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGIL 318 (644)
Q Consensus 240 ~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~-T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (644)
..|.||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..++
T Consensus 166 ~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~------------------------------- 214 (413)
T PHA02875 166 CCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNK------------------------------- 214 (413)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCC-------------------------------
Confidence 9999999999999999999999999999999998875 89999999998
Q ss_pred HHHHHHHHHcCCCCCCC---CCCCCCcchhhh
Q psy2733 319 LAVFLFLVKHGAPLSLE---NNNRQKPLDLIL 347 (644)
Q Consensus 319 ~~iv~~Ll~~Gadi~~~---n~~G~TpL~~A~ 347 (644)
.+++++|+++|+|++.. +..|.||++++.
T Consensus 215 ~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~ 246 (413)
T PHA02875 215 IDIVRLFIKRGADCNIMFMIEGEECTILDMIC 246 (413)
T ss_pred HHHHHHHHHCCcCcchHhhcCCCchHHHHHHH
Confidence 67999999999999876 678899999875
No 14
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00 E-value=5e-36 Score=329.78 Aligned_cols=313 Identities=17% Similarity=0.175 Sum_probs=220.8
Q ss_pred CcHHHHHHHcC---CHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcC--CHHHHHHH-hhccCC--Cccchhhhhhhhhc
Q psy2733 1 KTLLHILAYQG---CVEELNILLARGACVYYPDDAGDTALHYAAFGN--KPDAIQIN-SHVSGA--NRSRKHIYKERHRT 72 (644)
Q Consensus 1 ~TpLh~Aa~~G---~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g--~~eiv~lL-~~~a~~--~~~~~~~~~~~~~~ 72 (644)
+||||+|+..| +.++|++||++||+++.+|..|+||||+|+..+ +.|+|++| ..|++. +.......++++..
T Consensus 42 ~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y 121 (672)
T PHA02730 42 NNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSY 121 (672)
T ss_pred CcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHH
Confidence 69999999997 599999999999999999999999999999977 79999999 886655 43332244444433
Q ss_pred cccccccC--------------------------CCCCCCCCCCCcccccccccccccCCC-------CCCcccchhhHH
Q psy2733 73 VTTEKVQR--------------------------PSNLPKVEPETPMLNMKFIPRMNEDML-------DTPSAECSGILI 119 (644)
Q Consensus 73 ~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~t~L~~ 119 (644)
+....... ...+...........++++...+.+.. ..+...++|+.+
T Consensus 122 ~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~ 201 (672)
T PHA02730 122 MSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLH 201 (672)
T ss_pred HHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHH
Confidence 33111000 000111111122222444444444442 234445543333
Q ss_pred -H-------------HHHHHHhCCCCCCCCCCCCCcHHHH--HHHcCCHHHHHHHhc-----------------------
Q psy2733 120 -K-------------QDFVLLRNGCNVNIQDNNQDTPMHD--AVAKGFEEIQLLLLS----------------------- 160 (644)
Q Consensus 120 -a-------------~v~~Ll~~gad~n~~d~~G~TpL~~--A~~~g~~~iv~~Ll~----------------------- 160 (644)
. ++++|+++|+++|.+|.+|.||||+ |...|+.+++++|++
T Consensus 202 ~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~ 281 (672)
T PHA02730 202 YYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADY 281 (672)
T ss_pred HHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHh
Confidence 2 2888888999998888889999885 444567888888887
Q ss_pred --------CCCCCccc--------------------cCCCCCc---------------------HHHHHHHcC---CHHH
Q psy2733 161 --------HPEVNLYL--------------------ENSKGFN---------------------ILNYAVLRG---NMKV 188 (644)
Q Consensus 161 --------~~~~~~~~--------------------~d~~g~t---------------------pL~~A~~~g---~~~~ 188 (644)
..|++... .+..|.+ .|+.=...+ +.++
T Consensus 282 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieI 361 (672)
T PHA02730 282 LNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPI 361 (672)
T ss_pred hhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHH
Confidence 02556554 4555654 555555544 5888
Q ss_pred HHHHHHhcCCccCCcCCCCCchHHHHHHhcCc----HHHHHHHHHhcCC--CcccCCCCCCCHHHH---HHHcC------
Q psy2733 189 TEKILALNRNLATVPKTSDGFTPLHVACFNDH----IEIVELLVEKYKV--NINALDLKKRTPLMA---AVGQG------ 253 (644)
Q Consensus 189 v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~----~~~v~~Ll~~~g~--~in~~d~~G~TpL~~---Aa~~g------ 253 (644)
++.|+++|++++. . ..|.||||+|+..++ .+++++|+++ |+ +++.+|..|.||||. |...+
T Consensus 362 velLIs~GAdIN~--k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~-Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~ 437 (672)
T PHA02730 362 LRCMLDNGATMDK--T-TDNNYPLHDYFVNNNNIVDVNVVRFIVEN-NGHMAINHVSNNGRLCMYGLILSRFNNCGYHCY 437 (672)
T ss_pred HHHHHHCCCCCCc--C-CCCCcHHHHHHHHcCCcchHHHHHHHHHc-CCCccccccccCCCchHhHHHHHHhcccccccc
Confidence 8888888888775 3 578899998887764 7889999887 44 688888888898883 33222
Q ss_pred ---CHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCC
Q psy2733 254 ---QTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGA 330 (644)
Q Consensus 254 ---~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Ga 330 (644)
..+++++|+.+|+++|.+|..|.||||+|+..++ .+++++|+++||
T Consensus 438 e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~-------------------------------~eive~LI~~GA 486 (672)
T PHA02730 438 ETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNN-------------------------------IQFARRLLEYGA 486 (672)
T ss_pred chhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCC-------------------------------HHHHHHHHHCCC
Confidence 1356888888899999899889999999888877 668889999999
Q ss_pred CCCCCCC-CCCCcchhhhc
Q psy2733 331 PLSLENN-NRQKPLDLILE 348 (644)
Q Consensus 331 di~~~n~-~G~TpL~~A~~ 348 (644)
++|.+|. .|.|||++|+.
T Consensus 487 dIN~~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 487 SVNTTSRSIINTAIQKSSY 505 (672)
T ss_pred CCCCCCCcCCcCHHHHHHH
Confidence 9998886 58999998874
No 15
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=9.9e-36 Score=302.76 Aligned_cols=238 Identities=21% Similarity=0.204 Sum_probs=206.2
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCC
Q psy2733 10 QGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEP 89 (644)
Q Consensus 10 ~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (644)
.++.+++++|+++|++ .+|.+|+||||+|+..|+.+++++
T Consensus 9 ~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~-------------------------------------- 48 (284)
T PHA02791 9 WKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCT-------------------------------------- 48 (284)
T ss_pred cCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHH--------------------------------------
Confidence 4788999999999985 589999999999999999999987
Q ss_pred CCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCcccc
Q psy2733 90 ETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLE 169 (644)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~ 169 (644)
|+++|++++.. +|+||||+|+..|+.+++++|++ .|++++.+
T Consensus 49 -----------------------------------Ll~~ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~-~Gadvn~~ 90 (284)
T PHA02791 49 -----------------------------------LLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLF-SGMDDSQF 90 (284)
T ss_pred -----------------------------------HHHCcCCCcCC--CCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCC
Confidence 66777777665 47899999999999999999999 79999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCC-chHHHHHHhcCcHHHHHHHHHhcCCCcccCC-CCCCCHHH
Q psy2733 170 NSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDG-FTPLHVACFNDHIEIVELLVEKYKVNINALD-LKKRTPLM 247 (644)
Q Consensus 170 d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g-~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d-~~G~TpL~ 247 (644)
|..|.||||+|+..|+.+++++|++.++++.. .+..| .||||+|+..|+.+++++|+++. .+ ..| ..|.||||
T Consensus 91 d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~--~~~~g~~TpL~~Aa~~g~~eivk~LL~~~-~~--~~d~~~g~TpLh 165 (284)
T PHA02791 91 DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF--YGKTGWKTSFYHAVMLNDVSIVSYFLSEI-PS--TFDLAILLSCIH 165 (284)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc--cCCCCCcHHHHHHHHcCCHHHHHHHHhcC-Cc--ccccccCccHHH
Confidence 99999999999999999999999999988755 44566 48999999999999999999873 32 223 35899999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCcccCCCCcH-HHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHH
Q psy2733 248 AAVGQGQTSVINYLMLRDVALDIQDIDGNGL-LHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLV 326 (644)
Q Consensus 248 ~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~-Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll 326 (644)
+|+..|+.+++++|+++|++++.+|..|.|| ||+|+..++ .+++++|+
T Consensus 166 ~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~-------------------------------~e~v~lLl 214 (284)
T PHA02791 166 ITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKD-------------------------------LEMLQALF 214 (284)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCC-------------------------------HHHHHHHH
Confidence 9999999999999999999999999999987 999999999 78999999
Q ss_pred HcCCCCCCCCCCCCCcchhhhcCCcHHHHHHHHhhhhccc
Q psy2733 327 KHGAPLSLENNNRQKPLDLILEDTSLLNEIMEHAREYVTD 366 (644)
Q Consensus 327 ~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~~~~~~~~~~ 366 (644)
++||+++.+|..| +||+.| ++.+.|++--.++..+
T Consensus 215 ~~Ga~in~~~~~~-~~l~~~----e~~~~ll~~~~~~~~~ 249 (284)
T PHA02791 215 KYDINIYSVNLEN-VLLDDA----EIAKMIIEKHVEYKSD 249 (284)
T ss_pred HCCCCCccCcccC-ccCCCH----HHHHHHHHhhhhhccc
Confidence 9999999999955 888654 3677777655555443
No 16
>KOG0510|consensus
Probab=100.00 E-value=3e-36 Score=323.10 Aligned_cols=305 Identities=22% Similarity=0.271 Sum_probs=192.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+|++|.|+..+.+ ++.-+..+..|..|.||||+|+.....+.|++| ..|++.+..+.....+++.+.......
T Consensus 62 d~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s 135 (929)
T KOG0510|consen 62 DTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYS 135 (929)
T ss_pred hhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccchHH
Confidence 4889999998865 444456677899999999999999999999999 999999885555544444443322111
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE 152 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~ 152 (644)
....+...+.+.+..+..+.||||+|+ .+.|++.|+++...|.+|.+|+|.|++.|..
T Consensus 136 ---------------~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~ 200 (929)
T KOG0510|consen 136 ---------------CLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSK 200 (929)
T ss_pred ---------------HHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcch
Confidence 122223333444445555556666653 4555566666665556666666666666666
Q ss_pred HHHHHHhcCC----CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCc-------------CCCCCchHHHHH
Q psy2733 153 EIQLLLLSHP----EVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVP-------------KTSDGFTPLHVA 215 (644)
Q Consensus 153 ~iv~~Ll~~~----~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~-------------~d~~g~T~Lh~A 215 (644)
+..+..+.+. +..+|..++.|.||||.|+..|+.++++.+|+.++...... .|++|.||||+|
T Consensus 201 e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a 280 (929)
T KOG0510|consen 201 ECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYA 280 (929)
T ss_pred hhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHH
Confidence 6666555522 23455555556666666666666666666665554433322 245556666666
Q ss_pred HhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH-CC-CCCCcccCCCCcHHHHHHHcCCcccccc
Q psy2733 216 CFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLML-RD-VALDIQDIDGNGLLHFLFIKKNFYKTPI 293 (644)
Q Consensus 216 ~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~-~g-advn~~d~~G~T~Lh~A~~~~~~~~~~~ 293 (644)
++.|+.+.++.|+.. |++++.++.++.||||.||.+|+.+.++.|++ .| ...|..|..|+||||+|+..|+
T Consensus 281 ~r~G~~~svd~Ll~~-Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH------ 353 (929)
T KOG0510|consen 281 ARQGGPESVDNLLGF-GASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGH------ 353 (929)
T ss_pred HHcCChhHHHHHHHc-CCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCH------
Confidence 666666666666655 56666666666666666666666666666665 22 3345555556666666665555
Q ss_pred cccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCC---CCCCCCCCcchhhhcCCcH--HHHHHH
Q psy2733 294 TREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLS---LENNNRQKPLDLILEDTSL--LNEIME 358 (644)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~---~~n~~G~TpL~~A~~~~~~--~~~l~~ 358 (644)
..++++|++.||... ..|.+|.||||+|+.+++. ++.++.
T Consensus 354 -------------------------~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~ 398 (929)
T KOG0510|consen 354 -------------------------DRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLIS 398 (929)
T ss_pred -------------------------HHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHH
Confidence 779999999999987 4599999999999976543 444443
No 17
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2e-34 Score=315.21 Aligned_cols=278 Identities=18% Similarity=0.305 Sum_probs=231.4
Q ss_pred cHHHHHHHcCCHHHHHHHHHC-CCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 2 TLLHILAYQGCVEELNILLAR-GACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~-Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
..|..|+..|+++.|+.|++. +..++..+..|.||||+|+..|+.++|++| ..|++++.
T Consensus 3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~------------------- 63 (434)
T PHA02874 3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINH------------------- 63 (434)
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------------------
Confidence 358899999999999999986 556888899999999999999999999998 77777766
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE 152 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~ 152 (644)
.+..+.|||+.|+ +++|+++|++++.. +....+.
T Consensus 64 -----------------------------~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~----------~~~~~~~ 104 (434)
T PHA02874 64 -----------------------------INTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSIL----------PIPCIEK 104 (434)
T ss_pred -----------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcc----------hhccCCH
Confidence 5566777777774 77788877776432 2233466
Q ss_pred HHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcC
Q psy2733 153 EIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYK 232 (644)
Q Consensus 153 ~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g 232 (644)
++++.|++ .|++++.++..|.||||+|+..|+.+++++|++.|+++.. .|..|.||||+|+..|+.+++++|++. |
T Consensus 105 ~~i~~ll~-~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~--~d~~g~tpLh~A~~~~~~~iv~~Ll~~-g 180 (434)
T PHA02874 105 DMIKTILD-CGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNI--EDDNGCYPIHIAIKHNFFDIIKLLLEK-G 180 (434)
T ss_pred HHHHHHHH-CcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCC--cCCCCCCHHHHHHHCCcHHHHHHHHHC-C
Confidence 77888887 6889999999999999999999999999999999988765 568899999999999999999999998 8
Q ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCC
Q psy2733 233 VNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPS 312 (644)
Q Consensus 233 ~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (644)
++++..|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..+.
T Consensus 181 ~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~------------------------- 235 (434)
T PHA02874 181 AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR------------------------- 235 (434)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-------------------------
Confidence 9999999999999999999999999999999999999999999999999998654
Q ss_pred CccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCC---cHHHHHHHHhhhhccccCccccchhhhh
Q psy2733 313 NEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDT---SLLNEIMEHAREYVTDLTNENNKVVTAI 378 (644)
Q Consensus 313 ~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 378 (644)
+.+.+|+ .|++++.+|.+|+||||+|+..+ ++++.|+. ...+....+..+.+++
T Consensus 236 -------~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~----~gad~n~~d~~g~TpL 292 (434)
T PHA02874 236 -------SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLY----HKADISIKDNKGENPI 292 (434)
T ss_pred -------HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHH----CcCCCCCCCCCCCCHH
Confidence 3556666 69999999999999999999654 34444443 2334444444444444
No 18
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2e-34 Score=319.88 Aligned_cols=257 Identities=20% Similarity=0.250 Sum_probs=222.8
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhc--CCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCCC
Q psy2733 10 QGCVEELNILLARGACVYYPDDAGDTALHYAAFG--NKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPK 86 (644)
Q Consensus 10 ~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~--g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (644)
..+.++|++|+++|+++|.+ ..|.||||+++.. ++.++|++| .+|+++|.
T Consensus 13 ~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~-------------------------- 65 (494)
T PHA02989 13 TVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNY-------------------------- 65 (494)
T ss_pred cCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccC--------------------------
Confidence 57899999999999999998 6799999866544 378999999 99999986
Q ss_pred CCCCCcccccccccccccCCCCCCcccchhhHHH-------------HHHHHHhCCCCCCCCCCCCCcHHHHHHHc---C
Q psy2733 87 VEPETPMLNMKFIPRMNEDMLDTPSAECSGILIK-------------QDFVLLRNGCNVNIQDNNQDTPMHDAVAK---G 150 (644)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a-------------~v~~Ll~~gad~n~~d~~G~TpL~~A~~~---g 150 (644)
.+ .+.|||+.+ ++++|+++|+++|.+|..|.||||.|+.. |
T Consensus 66 ----------------------~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~ 122 (494)
T PHA02989 66 ----------------------KG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNIN 122 (494)
T ss_pred ----------------------CC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccC
Confidence 21 234555543 48899999999999999999999988765 6
Q ss_pred CHHHHHHHhcCCCCCc-cccCCCCCcHHHHHHHc--CCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcC----cHHH
Q psy2733 151 FEEIQLLLLSHPEVNL-YLENSKGFNILNYAVLR--GNMKVTEKILALNRNLATVPKTSDGFTPLHVACFND----HIEI 223 (644)
Q Consensus 151 ~~~iv~~Ll~~~~~~~-~~~d~~g~tpL~~A~~~--g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g----~~~~ 223 (644)
+.+++++|++ .|+++ +..+..|.||||+|+.. ++.++++.|++.|+++... .+..|.||||.|++.+ +.++
T Consensus 123 ~~eiv~~Ll~-~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~-~~~~g~tpL~~a~~~~~~~~~~~i 200 (494)
T PHA02989 123 NCDMLRFLLS-KGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEK-TSLYGLTPMNIYLRNDIDVISIKV 200 (494)
T ss_pred cHHHHHHHHH-CCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc-ccccCCChHHHHHhcccccccHHH
Confidence 8999999999 79999 89999999999999865 6899999999999987653 3478999999998764 8999
Q ss_pred HHHHHHhcCCCcccCCCCCCCHHHHHHHcC------CHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccC
Q psy2733 224 VELLVEKYKVNINALDLKKRTPLMAAVGQG------QTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREK 297 (644)
Q Consensus 224 v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g------~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~ 297 (644)
+++|+++ |++++..|..|.||||.++..+ ..+++++|+. |+++|.+|..|+||||+|+..++
T Consensus 201 v~~Ll~~-Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~---------- 268 (494)
T PHA02989 201 IKYLIKK-GVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDN---------- 268 (494)
T ss_pred HHHHHhC-CCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcC----------
Confidence 9999998 8999999999999999877643 5678887665 79999999999999999999988
Q ss_pred CchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCc
Q psy2733 298 SVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTS 351 (644)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~ 351 (644)
.+++++|+++|||++.+|..|+|||++|++.++
T Consensus 269 ---------------------~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~ 301 (494)
T PHA02989 269 ---------------------YEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGN 301 (494)
T ss_pred ---------------------HHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 779999999999999999999999999996543
No 19
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=1e-34 Score=295.31 Aligned_cols=214 Identities=17% Similarity=0.214 Sum_probs=194.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+|+..|+.+++++|++.|++++.++ |+||||+|+..|+.+++++
T Consensus 31 ~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~l----------------------------- 79 (284)
T PHA02791 31 HSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKI----------------------------- 79 (284)
T ss_pred CcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHH-----------------------------
Confidence 699999999999999999999999998764 7899999999999999987
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|++.|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 80 --------------------------------------------LL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~ 115 (284)
T PHA02791 80 --------------------------------------------LLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVK 115 (284)
T ss_pred --------------------------------------------HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 778888999999999999999999999999999999
Q ss_pred CCCCCccccCCCCC-cHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC
Q psy2733 161 HPEVNLYLENSKGF-NILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD 239 (644)
Q Consensus 161 ~~~~~~~~~d~~g~-tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d 239 (644)
.|++++.++..|+ ||||+|+..|+.+++++|++.++.... ...|.||||+|+..|+.+++++|++. |++++.+|
T Consensus 116 -~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d---~~~g~TpLh~Aa~~g~~eiv~lLL~~-gAd~n~~d 190 (284)
T PHA02791 116 -KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD---LAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNN 190 (284)
T ss_pred -CCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccc---cccCccHHHHHHHcCCHHHHHHHHHC-CCCCCccc
Confidence 7999999998885 899999999999999999998754321 13589999999999999999999998 89999999
Q ss_pred CCCCCH-HHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchH
Q psy2733 240 LKKRTP-LMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGIL 318 (644)
Q Consensus 240 ~~G~Tp-L~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (644)
..|.|| ||+|+..|+.+++++|+++|+++|.+|..| ++| +.
T Consensus 191 ~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~~------------------------------- 232 (284)
T PHA02791 191 SLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------DD------------------------------- 232 (284)
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------CC-------------------------------
Confidence 999987 999999999999999999999999999854 555 33
Q ss_pred HHHHHHHHHcCCCC
Q psy2733 319 LAVFLFLVKHGAPL 332 (644)
Q Consensus 319 ~~iv~~Ll~~Gadi 332 (644)
.|++++|+++-++.
T Consensus 233 ~e~~~~ll~~~~~~ 246 (284)
T PHA02791 233 AEIAKMIIEKHVEY 246 (284)
T ss_pred HHHHHHHHHhhhhh
Confidence 67999999988764
No 20
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=322.97 Aligned_cols=197 Identities=14% Similarity=0.041 Sum_probs=143.8
Q ss_pred CcHHHHHHHc---CCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHH----HHHHH-hhccCCCccchhhhhhhhhc
Q psy2733 1 KTLLHILAYQ---GCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPD----AIQIN-SHVSGANRSRKHIYKERHRT 72 (644)
Q Consensus 1 ~TpLh~Aa~~---G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~e----iv~lL-~~~a~~~~~~~~~~~~~~~~ 72 (644)
+||||+|++. |+.++|++||+.|++++.+|..|+||||+|+..|+.+ ++++| ..+...+..... ...+.+
T Consensus 33 ~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~--~~~~~a 110 (661)
T PHA02917 33 NNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFN--IFSYMK 110 (661)
T ss_pred CcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcc--hHHHHH
Confidence 6999998665 8899999999999999999999999999999999955 45666 444333332110 111111
Q ss_pred cccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHH---------HHHHHHhCCCCCCCCCC---CC-
Q psy2733 73 VTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIK---------QDFVLLRNGCNVNIQDN---NQ- 139 (644)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a---------~v~~Ll~~gad~n~~d~---~G- 139 (644)
........++++...+.+....+..|.|||+++ ++++|+++|+++|..|. .|
T Consensus 111 ---------------~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~ 175 (661)
T PHA02917 111 ---------------SKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGY 175 (661)
T ss_pred ---------------hhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccc
Confidence 111122345666777888888899999999854 28999999999986653 34
Q ss_pred ----------CcHHHHHHH-----------cCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCH--HHHHHHHHhc
Q psy2733 140 ----------DTPMHDAVA-----------KGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNM--KVTEKILALN 196 (644)
Q Consensus 140 ----------~TpL~~A~~-----------~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~--~~v~~Ll~~~ 196 (644)
.||||+|+. .++.+++++|++ .|++++.+|.+|.||||+|+..|+. ++|+.|++ |
T Consensus 176 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~-~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g 253 (661)
T PHA02917 176 AYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLIN-HGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-G 253 (661)
T ss_pred ccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHH-CCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-C
Confidence 499999986 468899999999 7999999999999999999999985 78988875 6
Q ss_pred CCccCC--cCCCCCchHHHHHH
Q psy2733 197 RNLATV--PKTSDGFTPLHVAC 216 (644)
Q Consensus 197 ~~~~~~--~~d~~g~T~Lh~A~ 216 (644)
++.... ..|..|.+|+|+|+
T Consensus 254 ~d~~~~~~~~~~~~~~~~~~a~ 275 (661)
T PHA02917 254 IDNTAYSYIDDLTCCTRGIMAD 275 (661)
T ss_pred CcccccccccCcccccchHHHH
Confidence 544321 12234455555555
No 21
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=9.1e-34 Score=314.42 Aligned_cols=228 Identities=29% Similarity=0.403 Sum_probs=216.1
Q ss_pred CcHHHH-----HHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHH--hcCCHHHHHHHhhccCCCccchhhhhhhhhcc
Q psy2733 1 KTLLHI-----LAYQGCVEELNILLARGACVYYPDDAGDTALHYAA--FGNKPDAIQINSHVSGANRSRKHIYKERHRTV 73 (644)
Q Consensus 1 ~TpLh~-----Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa--~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~ 73 (644)
+||||+ |+..|+.+++++|++.|++++..|..|.||||+|+ ..|+.+++++
T Consensus 69 ~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~---------------------- 126 (480)
T PHA03100 69 STPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEY---------------------- 126 (480)
T ss_pred cCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHH----------------------
Confidence 489999 99999999999999999999999999999999999 9999999987
Q ss_pred ccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--C
Q psy2733 74 TTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKG--F 151 (644)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g--~ 151 (644)
|+++|++++..+..|.||||+|+..| +
T Consensus 127 ---------------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 155 (480)
T PHA03100 127 ---------------------------------------------------LLDNGANVNIKNSDGENLLHLYLESNKID 155 (480)
T ss_pred ---------------------------------------------------HHHcCCCCCccCCCCCcHHHHHHHcCCCh
Confidence 78888899999999999999999999 9
Q ss_pred HHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCC------chHHHHHHhcCc--HHH
Q psy2733 152 EEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDG------FTPLHVACFNDH--IEI 223 (644)
Q Consensus 152 ~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g------~T~Lh~A~~~g~--~~~ 223 (644)
.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.|+++.. .+..| .||||.|+..|+ .++
T Consensus 156 ~~iv~~Ll~-~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~--~~~~~~~~~~~~t~l~~a~~~~~~~~~i 232 (480)
T PHA03100 156 LKILKLLID-KGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINA--GDIETLLFTIFETPLHIAACYNEITLEV 232 (480)
T ss_pred HHHHHHHHH-CCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccC--CCCCCCcHHHHHhHHHHHHHhCcCcHHH
Confidence 999999999 7999999999999999999999999999999999988765 44566 899999999999 999
Q ss_pred HHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHH
Q psy2733 224 VELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYE 303 (644)
Q Consensus 224 v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~ 303 (644)
+++|++. |++++.+|..|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..++
T Consensus 233 v~~Ll~~-g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~---------------- 295 (480)
T PHA03100 233 VNYLLSY-GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNN---------------- 295 (480)
T ss_pred HHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCC----------------
Confidence 9999998 89999999999999999999999999999999999999999999999999999988
Q ss_pred hhhhcCCCCCccchHHHHHHHHHHcCCCCCCCC
Q psy2733 304 EYLSVGGPSNEHGILLAVFLFLVKHGAPLSLEN 336 (644)
Q Consensus 304 ~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n 336 (644)
.+++++|+++|++++..+
T Consensus 296 ---------------~~iv~~Ll~~g~~i~~i~ 313 (480)
T PHA03100 296 ---------------KEIFKLLLNNGPSIKTII 313 (480)
T ss_pred ---------------HHHHHHHHhcCCCHHHHH
Confidence 679999999999987654
No 22
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=309.33 Aligned_cols=233 Identities=19% Similarity=0.228 Sum_probs=205.3
Q ss_pred CcHHHHHHHc--CCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcC------CHHHHHHH-hhccCCCccchhhhhhhhh
Q psy2733 1 KTLLHILAYQ--GCVEELNILLARGACVYYPDDAGDTALHYAAFGN------KPDAIQIN-SHVSGANRSRKHIYKERHR 71 (644)
Q Consensus 1 ~TpLh~Aa~~--G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g------~~eiv~lL-~~~a~~~~~~~~~~~~~~~ 71 (644)
+||||.++.. |+.++|++|+++||++|.++ .|.||||.|+.++ +.+++++| .+|++++.
T Consensus 36 ~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~----------- 103 (494)
T PHA02989 36 NSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINL----------- 103 (494)
T ss_pred CCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCC-----------
Confidence 4788766554 37899999999999999887 5799999998754 46899999 99999988
Q ss_pred ccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH----------HHHHHhCCCCC-CCCCCCCC
Q psy2733 72 TVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ----------DFVLLRNGCNV-NIQDNNQD 140 (644)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~----------v~~Ll~~gad~-n~~d~~G~ 140 (644)
.+..|.|||+.++ +++|+++|+++ +..|..|+
T Consensus 104 -------------------------------------~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~ 146 (494)
T PHA02989 104 -------------------------------------KTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGY 146 (494)
T ss_pred -------------------------------------CCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCC
Confidence 7778889988652 89999999999 79999999
Q ss_pred cHHHHHHHc--CCHHHHHHHhcCCCCCccc-cCCCCCcHHHHHHHcC----CHHHHHHHHHhcCCccCCcCCCCCchHHH
Q psy2733 141 TPMHDAVAK--GFEEIQLLLLSHPEVNLYL-ENSKGFNILNYAVLRG----NMKVTEKILALNRNLATVPKTSDGFTPLH 213 (644)
Q Consensus 141 TpL~~A~~~--g~~~iv~~Ll~~~~~~~~~-~d~~g~tpL~~A~~~g----~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh 213 (644)
||||+|+.. ++.+++++|++ .|++++. .+..|.||||+|+..+ +.+++++|++.|+++.. .+..|.|+||
T Consensus 147 tpLh~a~~~~~~~~~iv~~Ll~-~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~--~~~~~~t~l~ 223 (494)
T PHA02989 147 NLLHMYLESFSVKKDVIKILLS-FGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIET--NNNGSESVLE 223 (494)
T ss_pred CHHHHHHHhccCCHHHHHHHHH-cCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccc--cCCccccHHH
Confidence 999999865 58999999999 7999988 6789999999998764 89999999999998766 4457899999
Q ss_pred HHHhcC------cHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 214 VACFND------HIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 214 ~A~~~g------~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
.++..+ ..+++++|+. ++++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..++
T Consensus 224 ~~~~~~~~~~~~~~~il~~l~~--~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~ 301 (494)
T PHA02989 224 SFLDNNKILSKKEFKVLNFILK--YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGN 301 (494)
T ss_pred HHHHhchhhcccchHHHHHHHh--CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 877643 4678887765 59999999999999999999999999999999999999999999999999999998
No 23
>KOG4412|consensus
Probab=100.00 E-value=5.7e-34 Score=255.25 Aligned_cols=200 Identities=31% Similarity=0.409 Sum_probs=178.5
Q ss_pred HHHHHhCCC-CCCCCCC-CCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHh-cCC
Q psy2733 122 DFVLLRNGC-NVNIQDN-NQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILAL-NRN 198 (644)
Q Consensus 122 v~~Ll~~ga-d~n~~d~-~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~ 198 (644)
++.+++... .+|.++. +|+||||||+..|+.+++.+|++..+..++-+|..||||||+|+..|+.++|+.|+.+ +++
T Consensus 19 veel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ad 98 (226)
T KOG4412|consen 19 VEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGAD 98 (226)
T ss_pred HHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCC
Confidence 455555544 5666654 9999999999999999999999778999999999999999999999999999999998 666
Q ss_pred ccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcH
Q psy2733 199 LATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGL 278 (644)
Q Consensus 199 ~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~ 278 (644)
++. .++.|.|+||||+-.|..+++++|+++ |+.++.+|..|.||||.|+.-|+.+++++|+..|+.+|.+|..|+||
T Consensus 99 vna--~tn~G~T~LHyAagK~r~eIaqlLle~-ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~Tp 175 (226)
T KOG4412|consen 99 VNA--TTNGGQTCLHYAAGKGRLEIAQLLLEK-GALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTP 175 (226)
T ss_pred cce--ecCCCcceehhhhcCChhhHHHHHHhc-CCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccH
Confidence 655 557999999999999999999999999 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCcHHHHHHH
Q psy2733 279 LHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTSLLNEIME 358 (644)
Q Consensus 279 Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~~ 358 (644)
||+|...++ .+++.+|+++||+++..|+.| ||+-.|. ..+...+++
T Consensus 176 L~~al~e~~-------------------------------~d~a~lLV~~gAd~~~edke~-t~~~~a~--~~l~~alk~ 221 (226)
T KOG4412|consen 176 LHHALAEGH-------------------------------PDVAVLLVRAGADTDREDKEG-TALRIAC--NELLEALKE 221 (226)
T ss_pred HHHHHhccC-------------------------------chHHHHHHHhccceeeccccC-chHHHHH--HHHHHHHHH
Confidence 999987777 569999999999999999999 9988875 444444443
No 24
>KOG4177|consensus
Probab=100.00 E-value=3e-34 Score=326.55 Aligned_cols=324 Identities=22% Similarity=0.295 Sum_probs=239.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
||||.|+..|+++++++|+.+|+.++..+..|.||||.|++.+..+++++| ..|+++........+.++.+........
T Consensus 244 ~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i 323 (1143)
T KOG4177|consen 244 TPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGHEEI 323 (1143)
T ss_pred cHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhcccchHHH
Confidence 789999999999999999999999999999999999999999999998888 8888888776666555544332211000
Q ss_pred ---------CCCCCCCCCCC------------------------------------------cccccccccccccCCCCC
Q psy2733 81 ---------PSNLPKVEPET------------------------------------------PMLNMKFIPRMNEDMLDT 109 (644)
Q Consensus 81 ---------~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~ 109 (644)
..+...-...+ .......+...+.+....
T Consensus 324 ~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~ 403 (1143)
T KOG4177|consen 324 VHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSA 403 (1143)
T ss_pred HHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCCcccC
Confidence 00000000000 111123444455555556
Q ss_pred CcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHhcCCCCCccccCCCCCcHHHHHH
Q psy2733 110 PSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKG-FEEIQLLLLSHPEVNLYLENSKGFNILNYAV 181 (644)
Q Consensus 110 ~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g-~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~ 181 (644)
...|.||+|.+. ++++++.|++++..+..|+||+|+|+..| ..++...+++ .+.+++.....|+||||.|+
T Consensus 404 gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~-~g~~~n~~s~~G~T~Lhlaa 482 (1143)
T KOG4177|consen 404 GKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQ-YGADPNAVSKQGFTPLHLAA 482 (1143)
T ss_pred CCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhh-cCCCcchhccccCcchhhhh
Confidence 666666666664 66666677777777777777777777777 6666666666 67777777777777777777
Q ss_pred HcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy2733 182 LRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYL 261 (644)
Q Consensus 182 ~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~L 261 (644)
..|+.+++..|++.++.... ....|.|+||.|...+...+++.+++. |++++.++..|.||||.|+.+|+.++|++|
T Consensus 483 q~Gh~~~~~llle~~~~~~~--~~~~~l~~lhla~~~~~v~~~~~l~~~-ga~v~~~~~r~~TpLh~A~~~g~v~~VkfL 559 (1143)
T KOG4177|consen 483 QEGHTEVVQLLLEGGANDNL--DAKKGLTPLHLAADEDTVKVAKILLEH-GANVDLRTGRGYTPLHVAVHYGNVDLVKFL 559 (1143)
T ss_pred ccCCchHHHHhhhcCCccCc--cchhccchhhhhhhhhhHHHHHHHhhc-CCceehhcccccchHHHHHhcCCchHHHHh
Confidence 77777777777776644333 225667777777777777777777776 899999999999999999999999999999
Q ss_pred HHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCC
Q psy2733 262 MLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQK 341 (644)
Q Consensus 262 l~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~T 341 (644)
+++|+|++.+++.|+||||.|+..|+ .+++.+|+++||++|..|.+|.|
T Consensus 560 Le~gAdv~ak~~~G~TPLH~Aa~~G~-------------------------------~~i~~LLlk~GA~vna~d~~g~T 608 (1143)
T KOG4177|consen 560 LEHGADVNAKDKLGYTPLHQAAQQGH-------------------------------NDIAELLLKHGASVNAADLDGFT 608 (1143)
T ss_pred hhCCccccccCCCCCChhhHHHHcCh-------------------------------HHHHHHHHHcCCCCCcccccCcc
Confidence 99999999999999999999999998 67999999999999999999999
Q ss_pred cchhhhcCCc--HHHHHHHHh
Q psy2733 342 PLDLILEDTS--LLNEIMEHA 360 (644)
Q Consensus 342 pL~~A~~~~~--~~~~l~~~~ 360 (644)
||++|+..+. ..+.++...
T Consensus 609 pL~iA~~lg~~~~~k~l~~~~ 629 (1143)
T KOG4177|consen 609 PLHIAVRLGYLSVVKLLKVVT 629 (1143)
T ss_pred hhHHHHHhcccchhhHHHhcc
Confidence 9999996543 344444433
No 25
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00 E-value=9e-33 Score=306.35 Aligned_cols=194 Identities=17% Similarity=0.304 Sum_probs=171.6
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHcC---CHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCC---HHHHHHHHHh
Q psy2733 122 DFVLLRNGCNVNIQDNNQDTPMHDAVAKG---FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGN---MKVTEKILAL 195 (644)
Q Consensus 122 v~~Ll~~gad~n~~d~~G~TpL~~A~~~g---~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~---~~~v~~Ll~~ 195 (644)
+++|+++|+++|.+|..|+||||+|+..+ +.+++++|++ .|++++..|..|.||||+|+..|+ .+++++|++.
T Consensus 92 v~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~-~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~ 170 (489)
T PHA02798 92 VKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIE-NGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK 170 (489)
T ss_pred HHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHh
Confidence 77899999999999999999999999876 7899999999 799999999999999999999988 9999999999
Q ss_pred cCCccCCcCCCCCchHHHHHHhc----CcHHHHHHHHHhcCCCcccCCCCCCCHHH-------HHHHcCCHHHHHHHHHC
Q psy2733 196 NRNLATVPKTSDGFTPLHVACFN----DHIEIVELLVEKYKVNINALDLKKRTPLM-------AAVGQGQTSVINYLMLR 264 (644)
Q Consensus 196 ~~~~~~~~~d~~g~T~Lh~A~~~----g~~~~v~~Ll~~~g~~in~~d~~G~TpL~-------~Aa~~g~~~iv~~Ll~~ 264 (644)
|+++... .+..|.||||.++.. ++.+++++|+++ |++++..+..|.|+++ ++...++.+++++|+.
T Consensus 171 gadin~~-~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~-Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~- 247 (489)
T PHA02798 171 GVDINTH-NNKEKYDTLHCYFKYNIDRIDADILKLFVDN-GFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS- 247 (489)
T ss_pred CCCcccc-cCcCCCcHHHHHHHhccccCCHHHHHHHHHC-CCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-
Confidence 9887653 235789999998764 479999999998 8999999999999877 2445667888888765
Q ss_pred CCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcch
Q psy2733 265 DVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLD 344 (644)
Q Consensus 265 gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~ 344 (644)
|+|+|.+|..|+||||+|+..++ .+++++|+++|||++.+|..|+|||+
T Consensus 248 ~~dvN~~d~~G~TPL~~A~~~~~-------------------------------~~~v~~LL~~GAdin~~d~~G~TpL~ 296 (489)
T PHA02798 248 YIDINQVDELGFNPLYYSVSHNN-------------------------------RKIFEYLLQLGGDINIITELGNTCLF 296 (489)
T ss_pred cCCCCCcCcCCccHHHHHHHcCc-------------------------------HHHHHHHHHcCCcccccCCCCCcHHH
Confidence 69999999999999999999888 67999999999999999999999999
Q ss_pred hhhcCC
Q psy2733 345 LILEDT 350 (644)
Q Consensus 345 ~A~~~~ 350 (644)
+|++.+
T Consensus 297 ~A~~~~ 302 (489)
T PHA02798 297 TAFENE 302 (489)
T ss_pred HHHHcC
Confidence 999554
No 26
>KOG4412|consensus
Probab=100.00 E-value=1.3e-33 Score=253.01 Aligned_cols=206 Identities=22% Similarity=0.302 Sum_probs=187.8
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCC-CCcccCC-CCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccccccc
Q psy2733 2 TLLHILAYQGCVEELNILLARGA-CVYYPDD-AGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga-~~n~~d~-~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
++.+.+++.....-++.|++... .++.++. +|+||||+|+..|+.+||.+|.
T Consensus 5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLl-------------------------- 58 (226)
T KOG4412|consen 5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLL-------------------------- 58 (226)
T ss_pred chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHH--------------------------
Confidence 56778888888888888888766 5677766 9999999999999999999852
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHh
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLL 159 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll 159 (644)
-+.+..+|.+|..||||||+|+..|+.++|+.|+
T Consensus 59 ----------------------------------------------sq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll 92 (226)
T KOG4412|consen 59 ----------------------------------------------SQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELL 92 (226)
T ss_pred ----------------------------------------------hcCCCCCCCccccCCchhhhhhhcCcHHHHHHHh
Confidence 2445567888999999999999999999999999
Q ss_pred cCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC
Q psy2733 160 SHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD 239 (644)
Q Consensus 160 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d 239 (644)
...++++|..++.|.|+||||+.+|..+++++|++.|+.+.. +|..|.||||.|+.-|+.+++++|+.. |+.+|.+|
T Consensus 93 ~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~--kD~~~qtplHRAAavGklkvie~Li~~-~a~~n~qD 169 (226)
T KOG4412|consen 93 NRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRI--KDKQGQTPLHRAAAVGKLKVIEYLISQ-GAPLNTQD 169 (226)
T ss_pred cCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcc--cccccCchhHHHHhccchhhHHHHHhc-CCCCCccc
Confidence 977999999999999999999999999999999999987766 778999999999999999999999998 79999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHH
Q psy2733 240 LKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLF 283 (644)
Q Consensus 240 ~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~ 283 (644)
..|+||||.|...|+.++..+|+++|+++...|+.| ||+-.|.
T Consensus 170 k~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 170 KYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIAC 212 (226)
T ss_pred ccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHH
Confidence 999999999999999999999999999999999988 9988775
No 27
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.8e-32 Score=300.68 Aligned_cols=278 Identities=18% Similarity=0.140 Sum_probs=225.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+||||+||..|+.+++++|++.+++.+. ..+.+||+.|+..++.+++++| ..+.+.........
T Consensus 71 ~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~------------- 135 (477)
T PHA02878 71 LTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVY------------- 135 (477)
T ss_pred CCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHH-------------
Confidence 6999999999999999999999876654 5688999999999999999998 54333221000000
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHH
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNN-QDTPMHDAVAKGFEEIQLLL 158 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~-G~TpL~~A~~~g~~~iv~~L 158 (644)
. ........+...++++|+++|+++|..+.. |.||||+|+..|+.+++++|
T Consensus 136 -------------------~---------~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~L 187 (477)
T PHA02878 136 -------------------I---------DKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELL 187 (477)
T ss_pred -------------------H---------hhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHH
Confidence 0 000001112334688999999999999998 99999999999999999999
Q ss_pred hcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhc-CcHHHHHHHHHhcCCCccc
Q psy2733 159 LSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFN-DHIEIVELLVEKYKVNINA 237 (644)
Q Consensus 159 l~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~-g~~~~v~~Ll~~~g~~in~ 237 (644)
++ .|++++..+..|.||||+|+..|+.++++.|++.|+++.. .|..|+||||+|+.. ++.+++++|++. |++++.
T Consensus 188 l~-~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~--~d~~g~TpLh~A~~~~~~~~iv~~Ll~~-gadvn~ 263 (477)
T PHA02878 188 LS-YGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDA--RDKCGNTPLHISVGYCKDYDILKLLLEH-GVDVNA 263 (477)
T ss_pred HH-CCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHHHhcCCHHHHHHHHHc-CCCCCc
Confidence 99 7999999999999999999999999999999999998776 668999999999975 789999999998 899999
Q ss_pred CCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccc
Q psy2733 238 LDL-KKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHG 316 (644)
Q Consensus 238 ~d~-~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (644)
++. .|.||||+| .++.+++++|+++|+|+|.+|.+|.||||+|+..+..
T Consensus 264 ~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~---------------------------- 313 (477)
T PHA02878 264 KSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLC---------------------------- 313 (477)
T ss_pred cCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCc----------------------------
Confidence 986 799999999 5789999999999999999999999999999975431
Q ss_pred hHHHHHHHHH-----HcCCCCCCCCCCCCCcchhhhcCCcHHHHHH
Q psy2733 317 ILLAVFLFLV-----KHGAPLSLENNNRQKPLDLILEDTSLLNEIM 357 (644)
Q Consensus 317 ~~~~iv~~Ll-----~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~ 357 (644)
.+++++|+ ..+++++.++..|..+-.-+++....+..+.
T Consensus 314 --~~~~~~li~~~~~~~~~~~~~~~~~g~~~n~~~i~~~~~~~~~~ 357 (477)
T PHA02878 314 --INIGRILISNICLLKRIKPDIKNSEGFIDNMDCITSNKRLNQIK 357 (477)
T ss_pred --cchHHHHHHHHHHHHhccCcccCcHHHHHHHHHHhccHHHHHHH
Confidence 23444444 4467888899999887666664444443333
No 28
>KOG4177|consensus
Probab=100.00 E-value=5e-33 Score=316.61 Aligned_cols=315 Identities=25% Similarity=0.319 Sum_probs=261.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
.||||.|+..+.+++++.++.+|+++...|..|.||||.|+..|+.+++.+| .+++.++..+..+.++++.+.......
T Consensus 210 ~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e 289 (1143)
T KOG4177|consen 210 FTPLHIACKKNRIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVE 289 (1143)
T ss_pred CCchhhhccccccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhh
Confidence 4899999999999999999999999999999999999999999999999999 999999999999999999888766544
Q ss_pred CCCCCCC---------CCCCCcccc---------cccccccccCC---------------------------------CC
Q psy2733 80 RPSNLPK---------VEPETPMLN---------MKFIPRMNEDM---------------------------------LD 108 (644)
Q Consensus 80 ~~~~~~~---------~~~~~~~~~---------~~~~~~~~~~~---------------------------------~~ 108 (644)
....+.. ....+++.. ........... ..
T Consensus 290 ~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~ 369 (1143)
T KOG4177|consen 290 VCKLLLQNGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQ 369 (1143)
T ss_pred hHhhhhccCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCc
Confidence 3322221 111111111 11122222222 23
Q ss_pred CCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHH
Q psy2733 109 TPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAV 181 (644)
Q Consensus 109 ~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~ 181 (644)
....+.++++.++ +++++..|+++|.++..|.||||.|+..++..+++.+++ .+++++..+..|+||+|+|+
T Consensus 370 a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~-~gA~~~~~~~lG~T~lhvaa 448 (1143)
T KOG4177|consen 370 AEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLK-RGASPNAKAKLGYTPLHVAA 448 (1143)
T ss_pred ccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEec-cCCChhhHhhcCCChhhhhh
Confidence 3445555555553 788888899998888899999999999999999999988 78899999999999999999
Q ss_pred HcC-CHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHH
Q psy2733 182 LRG-NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINY 260 (644)
Q Consensus 182 ~~g-~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~ 260 (644)
..| ..++...+++.+.+++.. ...|.||||+|+..|+.+++..|++. ++..+.....|.|+||+|...+.+.+++.
T Consensus 449 ~~g~~~~~~~~l~~~g~~~n~~--s~~G~T~Lhlaaq~Gh~~~~~llle~-~~~~~~~~~~~l~~lhla~~~~~v~~~~~ 525 (1143)
T KOG4177|consen 449 KKGRYLQIARLLLQYGADPNAV--SKQGFTPLHLAAQEGHTEVVQLLLEG-GANDNLDAKKGLTPLHLAADEDTVKVAKI 525 (1143)
T ss_pred hcccHhhhhhhHhhcCCCcchh--ccccCcchhhhhccCCchHHHHhhhc-CCccCccchhccchhhhhhhhhhHHHHHH
Confidence 998 788888888888777663 36899999999999999999999887 67788888889999999999999999999
Q ss_pred HHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCC
Q psy2733 261 LMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQ 340 (644)
Q Consensus 261 Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~ 340 (644)
++++|++++.++..|.||||+|+..|+ +.+|++|+++|||++.+++.|+
T Consensus 526 l~~~ga~v~~~~~r~~TpLh~A~~~g~-------------------------------v~~VkfLLe~gAdv~ak~~~G~ 574 (1143)
T KOG4177|consen 526 LLEHGANVDLRTGRGYTPLHVAVHYGN-------------------------------VDLVKFLLEHGADVNAKDKLGY 574 (1143)
T ss_pred HhhcCCceehhcccccchHHHHHhcCC-------------------------------chHHHHhhhCCccccccCCCCC
Confidence 999999999999999999999999998 6699999999999999999999
Q ss_pred CcchhhhcCC
Q psy2733 341 KPLDLILEDT 350 (644)
Q Consensus 341 TpL~~A~~~~ 350 (644)
||||.|+..+
T Consensus 575 TPLH~Aa~~G 584 (1143)
T KOG4177|consen 575 TPLHQAAQQG 584 (1143)
T ss_pred ChhhHHHHcC
Confidence 9999999655
No 29
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.98 E-value=3.7e-31 Score=287.81 Aligned_cols=201 Identities=25% Similarity=0.309 Sum_probs=183.5
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcC
Q psy2733 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPK 204 (644)
Q Consensus 125 Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 204 (644)
|++.|+++|..+.+|.||||+|+..|+.+++++|++ .|++++..+..+.||||+|+..|+.++++.|++.++......
T Consensus 21 Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~- 98 (413)
T PHA02875 21 LLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMK-HGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVF- 98 (413)
T ss_pred HHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccc-
Confidence 788899999999999999999999999999999999 799999999999999999999999999999999987664432
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHH
Q psy2733 205 TSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFI 284 (644)
Q Consensus 205 d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~ 284 (644)
+..|+||||+|+..|+.+++++|++. |++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 99 ~~~g~tpL~~A~~~~~~~iv~~Ll~~-gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~ 177 (413)
T PHA02875 99 YKDGMTPLHLATILKKLDIMKLLIAR-GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMA 177 (413)
T ss_pred cCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 36799999999999999999999998 89999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCC-CcchhhhcCC--cHHHHHHHH
Q psy2733 285 KKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQ-KPLDLILEDT--SLLNEIMEH 359 (644)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~-TpL~~A~~~~--~~~~~l~~~ 359 (644)
.++ .+++++|+++|++++..+..|. ||+++|+..+ ++++.|+..
T Consensus 178 ~g~-------------------------------~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~ 224 (413)
T PHA02875 178 KGD-------------------------------IAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKR 224 (413)
T ss_pred cCC-------------------------------HHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHC
Confidence 998 7799999999999999998875 8899899544 345555443
No 30
>KOG0508|consensus
Probab=99.98 E-value=1e-31 Score=272.27 Aligned_cols=176 Identities=22% Similarity=0.262 Sum_probs=149.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHH-CCCCCccc--------CCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhh
Q psy2733 1 KTLLHILAYQGCVEELNILLA-RGACVYYP--------DDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERH 70 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~-~Ga~~n~~--------d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~ 70 (644)
.|||-+||++|+.++|++|++ .++++... ..+|-+||..|+..||.++|++| .+++++|.
T Consensus 43 ~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~---------- 112 (615)
T KOG0508|consen 43 GTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVND---------- 112 (615)
T ss_pred CCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccc----------
Confidence 489999999999999999999 46665443 45688999999999999999999 99999987
Q ss_pred hccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHH
Q psy2733 71 RTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPM 143 (644)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL 143 (644)
......|||--|+ ++.|+++|+|+++.|..|.|.|
T Consensus 113 --------------------------------------tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcL 154 (615)
T KOG0508|consen 113 --------------------------------------TTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCL 154 (615)
T ss_pred --------------------------------------ccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeE
Confidence 5555556666553 8888888999988888889999
Q ss_pred HHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHH
Q psy2733 144 HDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEI 223 (644)
Q Consensus 144 ~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~ 223 (644)
|+|+.+|+.+|+++|++ .|+++|.++..|.|+||.|++.|+.+++++|+.+++.+.. |..|.|||..|+..|+.++
T Consensus 155 mIa~ykGh~~I~qyLle-~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~---d~~GmtPL~~Aa~tG~~~i 230 (615)
T KOG0508|consen 155 MIACYKGHVDIAQYLLE-QGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV---DGHGMTPLLLAAVTGHTDI 230 (615)
T ss_pred EeeeccCchHHHHHHHH-hCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee---cCCCCchHHHHhhhcchHH
Confidence 99998899999999888 7888888888889999999989999999988888877654 4668899988888888888
Q ss_pred HHHHH
Q psy2733 224 VELLV 228 (644)
Q Consensus 224 v~~Ll 228 (644)
|+.|+
T Consensus 231 Ve~L~ 235 (615)
T KOG0508|consen 231 VERLL 235 (615)
T ss_pred HHHHh
Confidence 88887
No 31
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=289.67 Aligned_cols=252 Identities=15% Similarity=0.157 Sum_probs=220.6
Q ss_pred cHHHHH--HHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhc-----CCHHHHHHH-hhccCCCccchhhhhhhhhcc
Q psy2733 2 TLLHIL--AYQGCVEELNILLARGACVYYPDDAGDTALHYAAFG-----NKPDAIQIN-SHVSGANRSRKHIYKERHRTV 73 (644)
Q Consensus 2 TpLh~A--a~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~-----g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~ 73 (644)
|+++.+ ...++.++|++|+++|+++|.+|..|.||||+|+.+ ++.+++++| .+|++++.
T Consensus 38 ~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~------------- 104 (489)
T PHA02798 38 SIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINK------------- 104 (489)
T ss_pred hHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCC-------------
Confidence 555533 334689999999999999999999999999999864 678999999 99999988
Q ss_pred ccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH----------HHHHHhCCCCCCCCCCCCCcHH
Q psy2733 74 TTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ----------DFVLLRNGCNVNIQDNNQDTPM 143 (644)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~----------v~~Ll~~gad~n~~d~~G~TpL 143 (644)
.+..|.||||+++ +++|+++|++++..|..|.|||
T Consensus 105 -----------------------------------~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL 149 (489)
T PHA02798 105 -----------------------------------KNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTML 149 (489)
T ss_pred -----------------------------------CCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHH
Confidence 7788889988774 7899999999999999999999
Q ss_pred HHHHHcCC---HHHHHHHhcCCCCCccccC-CCCCcHHHHHHHc----CCHHHHHHHHHhcCCccCCcCCCCCchHHH--
Q psy2733 144 HDAVAKGF---EEIQLLLLSHPEVNLYLEN-SKGFNILNYAVLR----GNMKVTEKILALNRNLATVPKTSDGFTPLH-- 213 (644)
Q Consensus 144 ~~A~~~g~---~~iv~~Ll~~~~~~~~~~d-~~g~tpL~~A~~~----g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh-- 213 (644)
|+|++.|+ .+++++|++ .|++++..+ ..|.||||.++.. ++.+++++|++.|+++.. .+..|.++++
T Consensus 150 ~~a~~~~~~~~~~vv~~Ll~-~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~--~~~~~~~~~~~~ 226 (489)
T PHA02798 150 QVYLQSNHHIDIEIIKLLLE-KGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINK--ENKSHKKKFMEY 226 (489)
T ss_pred HHHHHcCCcchHHHHHHHHH-hCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCccc--CCccccchHHHH
Confidence 99999998 999999999 799999885 5789999998765 489999999999988765 4456778776
Q ss_pred -----HHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCc
Q psy2733 214 -----VACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNF 288 (644)
Q Consensus 214 -----~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~ 288 (644)
++...++.+++.+|+. ++++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..++
T Consensus 227 l~~l~~~~~~~~~~i~~~l~~--~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~- 303 (489)
T PHA02798 227 LNSLLYDNKRFKKNILDFIFS--YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENES- 303 (489)
T ss_pred HHHHHhhcccchHHHHHHHHh--cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCc-
Confidence 2445677888888876 58999999999999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCC
Q psy2733 289 YKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENN 337 (644)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~ 337 (644)
.++++.|+++|++++....
T Consensus 304 ------------------------------~~iv~~lL~~~~~~~~i~~ 322 (489)
T PHA02798 304 ------------------------------KFIFNSILNKKPNKNTISY 322 (489)
T ss_pred ------------------------------HHHHHHHHccCCCHHHHHH
Confidence 6699999999998875443
No 32
>PHA02792 ankyrin-like protein; Provisional
Probab=99.97 E-value=2.8e-30 Score=281.51 Aligned_cols=297 Identities=12% Similarity=0.091 Sum_probs=231.2
Q ss_pred HHHH-HHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHh-cCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 3 LLHI-LAYQGCVEELNILLARGACVYYPDDAGDTALHYAAF-GNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 3 pLh~-Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~-~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
++|+ |...|++|+|++|+++||++|.++..|.||||+|+. .++.|++++| .+|+++......+++++...+......
T Consensus 74 ~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~ 153 (631)
T PHA02792 74 IFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYY 153 (631)
T ss_pred HHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccccccc
Confidence 4544 556799999999999999999999999999999976 6999999999 999998877777777666555432211
Q ss_pred -CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH--------------HHHHHhCCCCCCCCCCCCCcHHH
Q psy2733 80 -RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ--------------DFVLLRNGCNVNIQDNNQDTPMH 144 (644)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~--------------v~~Ll~~gad~n~~d~~G~TpL~ 144 (644)
........+ .+.-....+..|.||||+++ +++|+.+|++++..|..|.||||
T Consensus 154 ~~~~~~~~~~-------------~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~ 220 (631)
T PHA02792 154 NWDDELDDYD-------------YDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLY 220 (631)
T ss_pred chhhhccccc-------------cccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHH
Confidence 111111000 01112236778999999885 78999999999999999999999
Q ss_pred HHHHcC--CHHHHHHHhcCCC---------------------CCcc--ccC--CCCCcH---------------------
Q psy2733 145 DAVAKG--FEEIQLLLLSHPE---------------------VNLY--LEN--SKGFNI--------------------- 176 (644)
Q Consensus 145 ~A~~~g--~~~iv~~Ll~~~~---------------------~~~~--~~d--~~g~tp--------------------- 176 (644)
+|+.+. ..+++++|++... .+++ +.+ -.|.+|
T Consensus 221 ~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~ 300 (631)
T PHA02792 221 YYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILK 300 (631)
T ss_pred HHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHH
Confidence 999999 8999999988311 0010 000 011111
Q ss_pred ---------HHHHHHcC--CHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCC--C
Q psy2733 177 ---------LNYAVLRG--NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKK--R 243 (644)
Q Consensus 177 ---------L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G--~ 243 (644)
||.=...+ +.+++++|++.|+.... .....+++.|+..|+.+++++|+++ |++++.+|..| .
T Consensus 301 ~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r----~~~~n~~~~Aa~~gn~eIVelLIs~-GADIN~kD~~g~~~ 375 (631)
T PHA02792 301 RYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLYR----FKHINKYFQKFDNRDPKVVEYILKN-GNVVVEDDDNIINI 375 (631)
T ss_pred HHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCcccc----CCcchHHHHHHHcCCHHHHHHHHHc-CCchhhhcCCCCCh
Confidence 22223333 57789999999987642 3356779999999999999999998 89999999875 6
Q ss_pred CHHHHHHHcCCH---HHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHH
Q psy2733 244 TPLMAAVGQGQT---SVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLA 320 (644)
Q Consensus 244 TpL~~Aa~~g~~---~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (644)
||||+|+..... +++++|+++|+|+|.+|..|+||||+|+..++ .+
T Consensus 376 TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n-------------------------------~e 424 (631)
T PHA02792 376 MPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHS-------------------------------VS 424 (631)
T ss_pred hHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCC-------------------------------HH
Confidence 999998877664 46889999999999999999999999999888 67
Q ss_pred HHHHHHHcCCCCCCCCCCCCCcchhhhc
Q psy2733 321 VFLFLVKHGAPLSLENNNRQKPLDLILE 348 (644)
Q Consensus 321 iv~~Ll~~Gadi~~~n~~G~TpL~~A~~ 348 (644)
++++|+++||+++.+|..|+|||++|..
T Consensus 425 ivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 425 LVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999999973
No 33
>PHA02917 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.8e-29 Score=285.22 Aligned_cols=316 Identities=14% Similarity=0.115 Sum_probs=200.1
Q ss_pred HHHHHHHHHCCCCCcccCCCCCcHHHHHHhc---CCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCCCCC
Q psy2733 13 VEELNILLARGACVYYPDDAGDTALHYAAFG---NKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVE 88 (644)
Q Consensus 13 ~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~---g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (644)
++.|+.|+..|+.++.+|.+|+||||+|+.. |+.++|++| ..|++++..+..+.++++.+...........
T Consensus 12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~----- 86 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKD----- 86 (661)
T ss_pred HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHH-----
Confidence 5788999999999999999999999998655 889999999 9999999877777788777766543211000
Q ss_pred CCCcccccccccccccCCCCCCcccchhhHHH-------HHHHHHhCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHh
Q psy2733 89 PETPMLNMKFIPRMNEDMLDTPSAECSGILIK-------QDFVLLRNGCNVNIQDNNQDTPMHDAV--AKGFEEIQLLLL 159 (644)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a-------~v~~Ll~~gad~n~~d~~G~TpL~~A~--~~g~~~iv~~Ll 159 (644)
....+..........+ ...+++.| ++++|+++|+++|.+|.+|+||||+|+ ..|+.+++++|+
T Consensus 87 ------~~~~Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi 158 (661)
T PHA02917 87 ------IAMALLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFI 158 (661)
T ss_pred ------HHHHHHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHH
Confidence 0001111000000011 11334434 277888888888888888888887543 456888888888
Q ss_pred cCCCCCccccCC---CC-----------CcHHHHHHH-----------cCCHHHHHHHHHhcCCccCCcCCCCCchHHHH
Q psy2733 160 SHPEVNLYLENS---KG-----------FNILNYAVL-----------RGNMKVTEKILALNRNLATVPKTSDGFTPLHV 214 (644)
Q Consensus 160 ~~~~~~~~~~d~---~g-----------~tpL~~A~~-----------~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~ 214 (644)
+ .|++++..|. .| .||||+|+. .++.+++++|++.|++++. .|..|+||||+
T Consensus 159 ~-~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~--~d~~G~TpLh~ 235 (661)
T PHA02917 159 E-NGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS--IDKNYCTALQY 235 (661)
T ss_pred H-cCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc--CCCCCCcHHHH
Confidence 8 6888776543 23 488888875 4577888888888877665 55778888888
Q ss_pred HHhcCcH--HHHHHHHHhcCCCcc----cCCCCCCCHHHHHHHc-------C--CHHHHHHHHHCCCCCC-------ccc
Q psy2733 215 ACFNDHI--EIVELLVEKYKVNIN----ALDLKKRTPLMAAVGQ-------G--QTSVINYLMLRDVALD-------IQD 272 (644)
Q Consensus 215 A~~~g~~--~~v~~Ll~~~g~~in----~~d~~G~TpL~~Aa~~-------g--~~~iv~~Ll~~gadvn-------~~d 272 (644)
|+..|+. ++|++|++ |++++ ..|..|.||+|+|+.. + +.+++++|++.|++.. ..+
T Consensus 236 A~~~g~~~~eivk~Li~--g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~ 313 (661)
T PHA02917 236 YIKSSHIDIDIVKLLMK--GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWR 313 (661)
T ss_pred HHHcCCCcHHHHHHHHh--CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccc
Confidence 8888774 68888764 56554 3556677778887731 1 5678888888887642 111
Q ss_pred C------------CCCcHHHHHHH---cCCcc--cccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHH-cCCCCCC
Q psy2733 273 I------------DGNGLLHFLFI---KKNFY--KTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVK-HGAPLSL 334 (644)
Q Consensus 273 ~------------~G~T~Lh~A~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~-~Gadi~~ 334 (644)
. .+.++||++.. .+... +++.+.+.++.+..... .+.........+++++|+. +|++++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~--~g~~~~~~~~~~~i~~LL~~~ga~~~~ 391 (661)
T PHA02917 314 NDKETISLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYGAVVNKEAI--HGYFRNINIDSYTMKYLLKKEGGDAVN 391 (661)
T ss_pred cchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCc--cccchhhcCCHHHHHHHHHhcCCCccc
Confidence 2 23344443332 33322 33444444433322100 0001111223456777775 6888877
Q ss_pred CCCCCCCcchhhhc
Q psy2733 335 ENNNRQKPLDLILE 348 (644)
Q Consensus 335 ~n~~G~TpL~~A~~ 348 (644)
++.+|+||||.|++
T Consensus 392 ~~~~G~TpL~~a~~ 405 (661)
T PHA02917 392 HLDDGEIPIGHLCK 405 (661)
T ss_pred cCCCCCChhHHHHH
Confidence 88889999998864
No 34
>PHA02730 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.5e-29 Score=278.81 Aligned_cols=299 Identities=12% Similarity=0.055 Sum_probs=229.5
Q ss_pred CcHHHHHHHcC--CHHHHHHHHHCCCC--CcccCCCCCcHHHHHHh--cCCHHHHHHH-h-hccCCCccch-----hhhh
Q psy2733 1 KTLLHILAYQG--CVEELNILLARGAC--VYYPDDAGDTALHYAAF--GNKPDAIQIN-S-HVSGANRSRK-----HIYK 67 (644)
Q Consensus 1 ~TpLh~Aa~~G--~~e~vk~LL~~Ga~--~n~~d~~G~TpLh~Aa~--~g~~eiv~lL-~-~~a~~~~~~~-----~~~~ 67 (644)
+||||+|+..| +.++|++|++.|++ ++..|..+++||+.++. +++.++|++| . .+.+++.... .+..
T Consensus 78 ~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~ 157 (672)
T PHA02730 78 LTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLV 157 (672)
T ss_pred CChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchh
Confidence 69999999977 79999999999664 47778779999999888 8889999999 4 5556554322 2223
Q ss_pred hhhhccccccc-------cCCCCC---------CC----------------CCCCCcccccccccccccCCCCCCcccch
Q psy2733 68 ERHRTVTTEKV-------QRPSNL---------PK----------------VEPETPMLNMKFIPRMNEDMLDTPSAECS 115 (644)
Q Consensus 68 ~~~~~~~~~~~-------~~~~~~---------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 115 (644)
++..+...... ...... .. .........++++...+.++..++..|.|
T Consensus 158 ~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~T 237 (672)
T PHA02730 158 DIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSL 237 (672)
T ss_pred hhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCC
Confidence 33222211110 000000 00 01111223356788899999999999999
Q ss_pred hhHHH---------HHHHHHh--------------------------------CCCCCCC--------------------
Q psy2733 116 GILIK---------QDFVLLR--------------------------------NGCNVNI-------------------- 134 (644)
Q Consensus 116 ~L~~a---------~v~~Ll~--------------------------------~gad~n~-------------------- 134 (644)
|||++ ++++|++ +|+|+..
T Consensus 238 pLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 317 (672)
T PHA02730 238 PIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITS 317 (672)
T ss_pred HHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhcccc
Confidence 99953 2899999 7998866
Q ss_pred CCCCCCc---------------------HHHHHHHcC---CHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCC----H
Q psy2733 135 QDNNQDT---------------------PMHDAVAKG---FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGN----M 186 (644)
Q Consensus 135 ~d~~G~T---------------------pL~~A~~~g---~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~----~ 186 (644)
.+..|.+ .||.-...+ +.+++++|++ .|++++.. ..|.||||+|+..++ .
T Consensus 318 ~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs-~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~ 395 (672)
T PHA02730 318 YDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLD-NGATMDKT-TDNNYPLHDYFVNNNNIVDV 395 (672)
T ss_pred ccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHH-CCCCCCcC-CCCCcHHHHHHHHcCCcchH
Confidence 5667765 677777755 6999999999 79999985 799999999998875 8
Q ss_pred HHHHHHHHhcCCccCCcCCCCCchHHHH---HHhcC---------cHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCC
Q psy2733 187 KVTEKILALNRNLATVPKTSDGFTPLHV---ACFND---------HIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQ 254 (644)
Q Consensus 187 ~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~---A~~~g---------~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~ 254 (644)
++++.|+++|++.+....|..|.||||. |...+ ..+++++|+++ |+++|.+|..|.||||+|+..++
T Consensus 396 eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~-GADINakD~~G~TPLh~Aa~~~~ 474 (672)
T PHA02730 396 NVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKY-MDDIDMIDNENKTLLYYAVDVNN 474 (672)
T ss_pred HHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhc-ccchhccCCCCCCHHHHHHHhCC
Confidence 9999999999864444466889999984 33332 23579999998 89999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCcccC-CCCcHHHHHHHc--CCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCC
Q psy2733 255 TSVINYLMLRDVALDIQDI-DGNGLLHFLFIK--KNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAP 331 (644)
Q Consensus 255 ~~iv~~Ll~~gadvn~~d~-~G~T~Lh~A~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gad 331 (644)
.+++++|+++|+++|.+|. .|.||||+|+.. ++ .+++++|+++|++
T Consensus 475 ~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~-------------------------------~eIv~~LLs~ga~ 523 (672)
T PHA02730 475 IQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENK-------------------------------TKLVDLLLSYHPT 523 (672)
T ss_pred HHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCc-------------------------------HHHHHHHHHcCCC
Confidence 9999999999999999997 599999999874 34 6799999999998
Q ss_pred CC
Q psy2733 332 LS 333 (644)
Q Consensus 332 i~ 333 (644)
++
T Consensus 524 i~ 525 (672)
T PHA02730 524 LE 525 (672)
T ss_pred HH
Confidence 75
No 35
>KOG0509|consensus
Probab=99.97 E-value=3.8e-30 Score=272.20 Aligned_cols=206 Identities=25% Similarity=0.333 Sum_probs=191.5
Q ss_pred HHHHHHHcCCHHHHHHHHHC-CCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 3 LLHILAYQGCVEELNILLAR-GACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 3 pLh~Aa~~G~~e~vk~LL~~-Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
.++.|+.+|.++.|+.|++. |.+++..|.+|.|+||+|+.+++.+++++
T Consensus 47 ~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~------------------------------ 96 (600)
T KOG0509|consen 47 DIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARY------------------------------ 96 (600)
T ss_pred hhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHH------------------------------
Confidence 46789999999999999999 99999999999999999999999999998
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQD-NNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d-~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|+++|..+ .-|.||||+|+++|+..++.+|++
T Consensus 97 -------------------------------------------li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlq 133 (600)
T KOG0509|consen 97 -------------------------------------------LISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQ 133 (600)
T ss_pred -------------------------------------------HHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHH
Confidence 777777777776 568899999999999999999999
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC-
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD- 239 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d- 239 (644)
.|++++.+|.+|.+|||.|+..|+.-+|-+|+.++++++. +|.+|+||||+|+.+|+...++.|++- ++.++..|
T Consensus 134 -hGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~--~D~~grTpLmwAaykg~~~~v~~LL~f-~a~~~~~d~ 209 (600)
T KOG0509|consen 134 -HGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDL--RDNNGRTPLMWAAYKGFALFVRRLLKF-GASLLLTDD 209 (600)
T ss_pred -cCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCC--cCCCCCCHHHHHHHhcccHHHHHHHHh-ccccccccc
Confidence 8999999999999999999999999999999999977766 779999999999999998888999887 78888888
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHc
Q psy2733 240 LKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIK 285 (644)
Q Consensus 240 ~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~ 285 (644)
..|.||||+|+..|+..++.+|++.|++.+.+|.+|.||+.+|..+
T Consensus 210 ~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 210 NHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred ccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 9999999999999999999977788899999999999999999776
No 36
>KOG0509|consensus
Probab=99.96 E-value=1.2e-29 Score=268.57 Aligned_cols=193 Identities=28% Similarity=0.363 Sum_probs=180.5
Q ss_pred HHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCc
Q psy2733 122 DFVLLRN-GCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLEN-SKGFNILNYAVLRGNMKVTEKILALNRNL 199 (644)
Q Consensus 122 v~~Ll~~-gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 199 (644)
++.|++. |.+++..|.+|.|+||+|+.+++.+++++|++ .|+++|... .-+.||||+|+++|+..+|..|+++|+++
T Consensus 60 v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~-~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdp 138 (600)
T KOG0509|consen 60 VKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLIS-HGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADP 138 (600)
T ss_pred HHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHH-cCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCC
Confidence 4457777 88999999999999999999999999999999 799999988 77899999999999999999999999998
Q ss_pred cCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc-CCCCcH
Q psy2733 200 ATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQD-IDGNGL 278 (644)
Q Consensus 200 ~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d-~~G~T~ 278 (644)
.. .|..|.||||.|++.|+.-.|-+||.+ ++++|.+|.+|+||||+|+.+|+...++.|++.|+.++.+| ..|+||
T Consensus 139 t~--~D~~G~~~lHla~~~~~~~~vayll~~-~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~Tp 215 (600)
T KOG0509|consen 139 TL--KDKQGLTPLHLAAQFGHTALVAYLLSK-GADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTP 215 (600)
T ss_pred ce--ecCCCCcHHHHHHHhCchHHHHHHHHh-cccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCch
Confidence 87 778999999999999999999999999 69999999999999999999999988999999999999998 899999
Q ss_pred HHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcC
Q psy2733 279 LHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILED 349 (644)
Q Consensus 279 Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~ 349 (644)
||+|+..|+ +.++.+|++.|++.+.+|.+|+||+++|.+.
T Consensus 216 LHwa~~~gN-------------------------------~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 216 LHWAVVGGN-------------------------------LTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHHHhcCC-------------------------------cceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 999999999 4477788888899999999999999999844
No 37
>KOG0508|consensus
Probab=99.96 E-value=3.8e-28 Score=246.42 Aligned_cols=213 Identities=23% Similarity=0.289 Sum_probs=177.5
Q ss_pred HHHHcCCHHHHHHHHHCCCC-----CcccCCCCCcHHHHHHhcCCHHHHHHH-h-hccCCCccchhhhhhhhhccccccc
Q psy2733 6 ILAYQGCVEELNILLARGAC-----VYYPDDAGDTALHYAAFGNKPDAIQIN-S-HVSGANRSRKHIYKERHRTVTTEKV 78 (644)
Q Consensus 6 ~Aa~~G~~e~vk~LL~~Ga~-----~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~-~~a~~~~~~~~~~~~~~~~~~~~~~ 78 (644)
-|++.|++..+..|+-...+ +-..+.+|.|||-+|+++||.++|++| . .++++.......
T Consensus 10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~------------- 76 (615)
T KOG0508|consen 10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVR------------- 76 (615)
T ss_pred HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEE-------------
Confidence 57888999888888866432 223456788999999999999999999 3 455543311000
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHH-------HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy2733 79 QRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIK-------QDFVLLRNGCNVNIQDNNQDTPMHDAVAKGF 151 (644)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a-------~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~ 151 (644)
+ .-....|..||..| +|++|+++|+++|.......|||.-||.-|+
T Consensus 77 --------F-------------------Dge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~ 129 (615)
T KOG0508|consen 77 --------F-------------------DGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGH 129 (615)
T ss_pred --------e-------------------CCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcch
Confidence 0 00233455565544 5999999999999999888999999999999
Q ss_pred HHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhc
Q psy2733 152 EEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKY 231 (644)
Q Consensus 152 ~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~ 231 (644)
.+++++|++ .|+++++.|..|.|.||+|+.+|+.+++++|++.|++++. ++..|+|+||.++..|+.+++++|++.
T Consensus 130 leivKyLvE-~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~--ks~kGNTALH~caEsG~vdivq~Ll~~- 205 (615)
T KOG0508|consen 130 LEIVKYLVE-HGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNA--KSYKGNTALHDCAESGSVDIVQLLLKH- 205 (615)
T ss_pred hHHHHHHHH-cCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcch--hcccCchHHHhhhhcccHHHHHHHHhC-
Confidence 999999998 8999999999999999999999999999999999999877 667899999999999999999999998
Q ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2733 232 KVNINALDLKKRTPLMAAVGQGQTSVINYLML 263 (644)
Q Consensus 232 g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~ 263 (644)
|+.+. +|..|+|||..|+..|+.++|++|++
T Consensus 206 ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 206 GAKID-VDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred Cceee-ecCCCCchHHHHhhhcchHHHHHHhc
Confidence 67766 56679999999999999999999983
No 38
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95 E-value=4.1e-27 Score=248.34 Aligned_cols=224 Identities=14% Similarity=0.056 Sum_probs=187.0
Q ss_pred HHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcc
Q psy2733 15 ELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPM 93 (644)
Q Consensus 15 ~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (644)
..++++.+|+++|.++.+| +|+..+..|++++| +++++++.-.
T Consensus 64 ~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~------------------------------- 107 (437)
T PHA02795 64 LYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFS------------------------------- 107 (437)
T ss_pred HHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhh-------------------------------
Confidence 3578888999999888887 89999999999886 5555554200
Q ss_pred cccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHhcCCCCCccccCC
Q psy2733 94 LNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVA--KGFEEIQLLLLSHPEVNLYLENS 171 (644)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~--~g~~~iv~~Ll~~~~~~~~~~d~ 171 (644)
..+ .++..++|+||.|+. .|+.+++++|++ .|++++..
T Consensus 108 ------------------------------~~~-------~~~~~~~~~L~~~~~n~~n~~eiV~~LI~-~GADIn~~-- 147 (437)
T PHA02795 108 ------------------------------III-------KNCNSVQDLLLYYLSNAYVEIDIVDFMVD-HGAVIYKI-- 147 (437)
T ss_pred ------------------------------hhh-------hccccccHHHHHHHHhcCCCHHHHHHHHH-CCCCCCCC--
Confidence 000 456679999999999 889999999999 79999874
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcC----CCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHH
Q psy2733 172 KGFNILNYAVLRGNMKVTEKILALNRNLATVPK----TSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLM 247 (644)
Q Consensus 172 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~----d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~ 247 (644)
++.||||.|+..|+.+++++|+++|+....... +..+.|++|.|+..++.+++++|+++ |+++|.+|..|.||||
T Consensus 148 ~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~-GADIN~kD~~G~TpLh 226 (437)
T PHA02795 148 ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY-IEDINQLDAGGRTLLY 226 (437)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhC-cCCcCcCCCCCCCHHH
Confidence 458999999999999999999999985433211 13478999999999999999999998 8999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHH
Q psy2733 248 AAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVK 327 (644)
Q Consensus 248 ~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~ 327 (644)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.. .....+.+++++|++
T Consensus 227 ~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~-----------------------~~~~~~~eIvelLL~ 283 (437)
T PHA02795 227 RAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVI-----------------------ARRETHLKILEILLR 283 (437)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcc-----------------------cccccHHHHHHHHHh
Confidence 999999999999999999999999999999999999988621 112234789999999
Q ss_pred cCCCCCCCCCC
Q psy2733 328 HGAPLSLENNN 338 (644)
Q Consensus 328 ~Gadi~~~n~~ 338 (644)
+|++++.....
T Consensus 284 ~gadI~~~~~~ 294 (437)
T PHA02795 284 EPLSIDCIKLA 294 (437)
T ss_pred CCCCCCchhHH
Confidence 99999875543
No 39
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95 E-value=6.7e-27 Score=229.37 Aligned_cols=175 Identities=17% Similarity=0.142 Sum_probs=155.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHHhcCCccCCcCCCCCchHHH
Q psy2733 136 DNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRG--NMKVTEKILALNRNLATVPKTSDGFTPLH 213 (644)
Q Consensus 136 d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh 213 (644)
.+.+.||||+|+..|+.++++.|++. ++..+..|.||||+|+..+ +.+++++|++.|+++.... +..|+||||
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~-~~~g~TpLh 92 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKT-RDNNLSALH 92 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC-CCCCCCHHH
Confidence 35678999999999999999999972 5677899999999999854 8999999999999887632 257999999
Q ss_pred HHHhc---CcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHH--cCCHHHHHHHHHCCCCCCcccCCCCcHHHHH-HHcCC
Q psy2733 214 VACFN---DHIEIVELLVEKYKVNINALDLKKRTPLMAAVG--QGQTSVINYLMLRDVALDIQDIDGNGLLHFL-FIKKN 287 (644)
Q Consensus 214 ~A~~~---g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~--~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A-~~~~~ 287 (644)
+|+.. ++.+++++|+++ |+++|.+|..|.||||+|+. .++.+++++|+++|++++.+|.+|+||||.+ +..++
T Consensus 93 ~a~~~~~~~~~eiv~~Ll~~-gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~ 171 (209)
T PHA02859 93 HYLSFNKNVEPEILKILIDS-GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSD 171 (209)
T ss_pred HHHHhCccccHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCC
Confidence 98764 479999999998 89999999999999999986 4689999999999999999999999999965 44555
Q ss_pred cccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhh
Q psy2733 288 FYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~ 347 (644)
.+++++|+++|++++.+|..|+|||++|.
T Consensus 172 -------------------------------~~iv~~Ll~~Gadi~~~d~~g~tpl~la~ 200 (209)
T PHA02859 172 -------------------------------KKIFDFLTSLGIDINETNKSGYNCYDLIK 200 (209)
T ss_pred -------------------------------HHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 67999999999999999999999999998
No 40
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94 E-value=5.4e-26 Score=222.97 Aligned_cols=149 Identities=13% Similarity=0.253 Sum_probs=107.9
Q ss_pred CCCCCCcHHHHHHHcC--CHHHHHHHhcCCCCCccccC-CCCCcHHHHHHHc---CCHHHHHHHHHhcCCccCCcCCCCC
Q psy2733 135 QDNNQDTPMHDAVAKG--FEEIQLLLLSHPEVNLYLEN-SKGFNILNYAVLR---GNMKVTEKILALNRNLATVPKTSDG 208 (644)
Q Consensus 135 ~d~~G~TpL~~A~~~g--~~~iv~~Ll~~~~~~~~~~d-~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~~d~~g 208 (644)
.|..|.||||+|+..+ +.+++++|++ .|++++.++ ..|.||||+|+.. ++.+++++|++.|++++. .|..|
T Consensus 47 ~~~~g~TpLh~a~~~~~~~~eiv~~Ll~-~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~--~d~~G 123 (209)
T PHA02859 47 CNDLYETPIFSCLEKDKVNVEILKFLIE-NGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITE--EDEDG 123 (209)
T ss_pred cCccCCCHHHHHHHcCCCCHHHHHHHHH-CCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCC--cCCCC
Confidence 4455666666666533 5666666666 566666654 3566666665542 356666666666665544 44667
Q ss_pred chHHHHHHh--cCcHHHHHHHHHhcCCCcccCCCCCCCHHHH-HHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHc
Q psy2733 209 FTPLHVACF--NDHIEIVELLVEKYKVNINALDLKKRTPLMA-AVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIK 285 (644)
Q Consensus 209 ~T~Lh~A~~--~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~-Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~ 285 (644)
.||||+|+. .++.+++++|++. |++++.+|..|.||||. |+..++.+++++|+++|++++.+|..|.||||+|..+
T Consensus 124 ~TpLh~a~~~~~~~~~iv~~Li~~-gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~ 202 (209)
T PHA02859 124 KNLLHMYMCNFNVRINVIKLLIDS-GVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFR 202 (209)
T ss_pred CCHHHHHHHhccCCHHHHHHHHHc-CCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhh
Confidence 777777654 3578899999987 79999999999999995 5667889999999999999999999999999999877
Q ss_pred CC
Q psy2733 286 KN 287 (644)
Q Consensus 286 ~~ 287 (644)
+-
T Consensus 203 ~~ 204 (209)
T PHA02859 203 NL 204 (209)
T ss_pred hh
Confidence 64
No 41
>PHA02792 ankyrin-like protein; Provisional
Probab=99.93 E-value=9e-25 Score=238.56 Aligned_cols=292 Identities=12% Similarity=0.071 Sum_probs=201.5
Q ss_pred cHHHHHHHcCCH-HHHHHHHHCCCCCcccCCCCCcHHHH-HHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccc
Q psy2733 2 TLLHILAYQGCV-EELNILLARGACVYYPDDAGDTALHY-AAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKV 78 (644)
Q Consensus 2 TpLh~Aa~~G~~-e~vk~LL~~Ga~~n~~d~~G~TpLh~-Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~ 78 (644)
||||.-.-..+. .-++.++..|.+++..+.+|.+++|+ |..+|+.|+|++| .+|++++.
T Consensus 39 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~------------------ 100 (631)
T PHA02792 39 TPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINS------------------ 100 (631)
T ss_pred ccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCccc------------------
Confidence 555544333332 22345555555666666666666664 3445666777777 66766665
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH--------HHHHHhCCCCC------------------
Q psy2733 79 QRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ--------DFVLLRNGCNV------------------ 132 (644)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~--------v~~Ll~~gad~------------------ 132 (644)
.+..+.+++++|. +++|+++||++
T Consensus 101 ------------------------------~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~ 150 (631)
T PHA02792 101 ------------------------------IKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRA 150 (631)
T ss_pred ------------------------------ccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccc
Confidence 6666778877762 88999999873
Q ss_pred ------------------CCCCCCCCcHHHHHHHcC-------CHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcC--C
Q psy2733 133 ------------------NIQDNNQDTPMHDAVAKG-------FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRG--N 185 (644)
Q Consensus 133 ------------------n~~d~~G~TpL~~A~~~g-------~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g--~ 185 (644)
|..|..|.||||+|+.++ +.++++.|++ .|++++..|..|.||||+|+.+. .
T Consensus 151 ~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~-~g~~~~~~d~~g~t~l~~~~~~~~i~ 229 (631)
T PHA02792 151 EYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLIS-HEKEMRYYTYREHTTLYYYVDKCDIK 229 (631)
T ss_pred cccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHh-CCCCcCccCCCCChHHHHHHHcccch
Confidence 244566889999999988 7899999999 78999989999999999999988 7
Q ss_pred HHHHHHHHHhcCCccCCc------------------CC-------CCCc------------------------------h
Q psy2733 186 MKVTEKILALNRNLATVP------------------KT-------SDGF------------------------------T 210 (644)
Q Consensus 186 ~~~v~~Ll~~~~~~~~~~------------------~d-------~~g~------------------------------T 210 (644)
.+++++|+... ...... -| -.|. -
T Consensus 230 ~ei~~~L~~~~-~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~ 308 (631)
T PHA02792 230 REIFDALFDSN-YSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQD 308 (631)
T ss_pred HHHHHHHHhcc-ccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHH
Confidence 88999888731 100000 00 0011 1
Q ss_pred HHHHHHhcC--cHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCC--CcHHHHHHHcC
Q psy2733 211 PLHVACFND--HIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDG--NGLLHFLFIKK 286 (644)
Q Consensus 211 ~Lh~A~~~g--~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G--~T~Lh~A~~~~ 286 (644)
.||.....+ +.+++++|+++ |+++. ...+..+++.|+..|+.+++++|+++||+++.+|.+| .||||+|....
T Consensus 309 ~l~~Yl~~~~v~ieiIK~LId~-Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~ 385 (631)
T PHA02792 309 LLSEYVSYHTVYINVIKCMIDE-GATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIH 385 (631)
T ss_pred HHHHHHhcCCccHHHHHHHHHC-CCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhc
Confidence 234444444 56888888888 67764 2235678999999999999999999999999999875 69999877654
Q ss_pred CcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCc--HHHHHHHHhhhhc
Q psy2733 287 NFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTS--LLNEIMEHAREYV 364 (644)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~--~~~~l~~~~~~~~ 364 (644)
... ..+++++|+++|||+|.+|..|+||||+|+..++ +.+.|+.. .
T Consensus 386 ~~~----------------------------v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~----G 433 (631)
T PHA02792 386 ESD----------------------------VLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDN----G 433 (631)
T ss_pred cHh----------------------------HHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHC----C
Confidence 411 2457899999999999999999999999995433 34444433 3
Q ss_pred cccCccccchhhhh
Q psy2733 365 TDLTNENNKVVTAI 378 (644)
Q Consensus 365 ~~~~~~~~~~~~~~ 378 (644)
.+....+..+.+.+
T Consensus 434 ADIN~kD~~G~TpL 447 (631)
T PHA02792 434 ADINITTKYGSTCI 447 (631)
T ss_pred CCCCCcCCCCCCHH
Confidence 34444444444433
No 42
>PHA02795 ankyrin-like protein; Provisional
Probab=99.93 E-value=5.5e-25 Score=232.26 Aligned_cols=187 Identities=11% Similarity=0.060 Sum_probs=170.0
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCcc------ccCCCCCcHHHHHHH--cCCHHHHHHHH
Q psy2733 122 DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLY------LENSKGFNILNYAVL--RGNMKVTEKIL 193 (644)
Q Consensus 122 v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~------~~d~~g~tpL~~A~~--~g~~~~v~~Ll 193 (644)
-++++.+|+++|..+.+| +|+..+..+++++|+. .|++++ .++..++|+||.++. .|+.++|++|+
T Consensus 65 ~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s-~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI 138 (437)
T PHA02795 65 YDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVS-KNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMV 138 (437)
T ss_pred HHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHh-cccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHH
Confidence 467899999999888777 8999999999999999 799988 778889999999999 89999999999
Q ss_pred HhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCc-ccC-----CCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q psy2733 194 ALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNI-NAL-----DLKKRTPLMAAVGQGQTSVINYLMLRDVA 267 (644)
Q Consensus 194 ~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~i-n~~-----d~~G~TpL~~Aa~~g~~~iv~~Ll~~gad 267 (644)
++|+++.. .++.||||.|+..++.+++++|+++ |++. +.. +..|.|++|.|+..++.+++++|+++|++
T Consensus 139 ~~GADIn~----~~~~t~lh~A~~~~~~eIVk~Lls~-Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GAD 213 (437)
T PHA02795 139 DHGAVIYK----IECLNAYFRGICKKESSVVEFILNC-GIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIED 213 (437)
T ss_pred HCCCCCCC----CCCCCHHHHHHHcCcHHHHHHHHhc-CCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCC
Confidence 99999865 3568999999999999999999999 6643 332 23478999999999999999999999999
Q ss_pred CCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhh
Q psy2733 268 LDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 268 vn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~ 347 (644)
+|.+|..|.||||+|+..++ .+++++|+++||+++.+|..|+||||+|+
T Consensus 214 IN~kD~~G~TpLh~Aa~~g~-------------------------------~eiVelLL~~GAdIN~~d~~G~TpLh~Aa 262 (437)
T PHA02795 214 INQLDAGGRTLLYRAIYAGY-------------------------------IDLVSWLLENGANVNAVMSNGYTCLDVAV 262 (437)
T ss_pred cCcCCCCCCCHHHHHHHcCC-------------------------------HHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 99999999999999999998 77999999999999999999999999999
Q ss_pred cCC
Q psy2733 348 EDT 350 (644)
Q Consensus 348 ~~~ 350 (644)
..+
T Consensus 263 ~~g 265 (437)
T PHA02795 263 DRG 265 (437)
T ss_pred HcC
Confidence 766
No 43
>KOG4369|consensus
Probab=99.93 E-value=3.6e-26 Score=249.53 Aligned_cols=297 Identities=20% Similarity=0.164 Sum_probs=243.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+|+|..|+..|+.|.|++|+.+|+++..+|+.|.+||.+|+-.||..+|+.| .+.++++.
T Consensus 758 ~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~vea------------------- 818 (2131)
T KOG4369|consen 758 KTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEA------------------- 818 (2131)
T ss_pred cccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhh-------------------
Confidence 5899999999999999999999999999999999999999999999999998 77777755
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE 152 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~ 152 (644)
..+..+.|+|.++. +++||..|++-..++-..+|||.+|...|..
T Consensus 819 ----------------------------Qsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~ 870 (2131)
T KOG4369|consen 819 ----------------------------QSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYT 870 (2131)
T ss_pred ----------------------------hcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchH
Confidence 14556667776663 8999999999888888889999999999999
Q ss_pred HHHHHHhcCCCCCccccC--CCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHh
Q psy2733 153 EIQLLLLSHPEVNLYLEN--SKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEK 230 (644)
Q Consensus 153 ~iv~~Ll~~~~~~~~~~d--~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ 230 (644)
+++..|+. .|.+++.+. +.|..||++|..+|+...++.|++.+.+++.... .+.+|+|-+|+..|+.+++.+||..
T Consensus 871 ~iI~~llS-~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIe-TNrnTaltla~fqgr~evv~lLLa~ 948 (2131)
T KOG4369|consen 871 KIIHALLS-SGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIE-TNRNTALTLALFQGRPEVVFLLLAA 948 (2131)
T ss_pred HHHHHHhh-cccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccc-cccccceeeccccCcchHHHHHHHH
Confidence 99999999 788887764 6788999999999999999999999988877655 6788999999999999999999988
Q ss_pred cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc--CCCCcHHHHHHHcCCcccccccccCCchhHHhhhh-
Q psy2733 231 YKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQD--IDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLS- 307 (644)
Q Consensus 231 ~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d--~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~- 307 (644)
.+++..+-..|.||||-++..|++++-++||..|+|+|.-- ....|+|-+++..|+...++.+......+.-....
T Consensus 949 -~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG 1027 (2131)
T KOG4369|consen 949 -QANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKG 1027 (2131)
T ss_pred -hhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCC
Confidence 68899999999999999999999999999999999988743 45678888888888866555544432221111100
Q ss_pred -cCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhh
Q psy2733 308 -VGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 308 -~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~ 347 (644)
.....+.+.+++..+.+|++++||++..|+...++++-|.
T Consensus 1028 ~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maaf 1068 (2131)
T KOG4369|consen 1028 CTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAF 1068 (2131)
T ss_pred CcccchhccCCccccchHHhhcccChhhhhcccccccHHHH
Confidence 0112344555677777888888888888877777777776
No 44
>KOG0502|consensus
Probab=99.92 E-value=4.1e-25 Score=204.06 Aligned_cols=185 Identities=19% Similarity=0.240 Sum_probs=168.1
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccC
Q psy2733 122 DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLAT 201 (644)
Q Consensus 122 v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~ 201 (644)
+..++.+|+..|..+..+++|+++++...+.+.+..+.+ ..+|..|..|+|||+||+.+|+..+|++||+.|+++..
T Consensus 112 ~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~---n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~ 188 (296)
T KOG0502|consen 112 VSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVN---NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA 188 (296)
T ss_pred eeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhh---ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhh
Confidence 445778888888899999999999999998888888765 47889999999999999999999999999999999876
Q ss_pred CcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHH
Q psy2733 202 VPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHF 281 (644)
Q Consensus 202 ~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~ 281 (644)
.- ....++|++|++.|..++|++||.. +.|+|.-|.+|-|||-||++.|++++++.|+..|+|++..+..|++++-.
T Consensus 189 lg--k~resALsLAt~ggytdiV~lLL~r-~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdl 265 (296)
T KOG0502|consen 189 LG--KYRESALSLATRGGYTDIVELLLTR-EVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDL 265 (296)
T ss_pred hh--hhhhhhHhHHhcCChHHHHHHHHhc-CCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHH
Confidence 43 4678999999999999999999998 89999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcch
Q psy2733 282 LFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLD 344 (644)
Q Consensus 282 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~ 344 (644)
|+..|+ .+|+..+++-+..+.+|+.-+||+|
T Consensus 266 AValGy--------------------------------r~Vqqvie~h~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 266 AVALGY--------------------------------RIVQQVIEKHALKLCQDSEKRTPLH 296 (296)
T ss_pred HHHhhh--------------------------------HHHHHHHHHHHHHHhhcccCCCCCC
Confidence 999887 3778888877888888888888875
No 45
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.91 E-value=3.8e-24 Score=249.08 Aligned_cols=237 Identities=21% Similarity=0.159 Sum_probs=182.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHC--CCCCcccCCCCCcHHH-HHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLAR--GACVYYPDDAGDTALH-YAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEK 77 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~--Ga~~n~~d~~G~TpLh-~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~ 77 (644)
+++++.||+.|+.+.++.+++. +.++|..|..|+|||| .|+.+++.+++++
T Consensus 18 ~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~l-------------------------- 71 (743)
T TIGR00870 18 EKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTEL-------------------------- 71 (743)
T ss_pred HHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHH--------------------------
Confidence 3578999999999999999999 8999999999999999 8889999999987
Q ss_pred ccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC---CHHH
Q psy2733 78 VQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKG---FEEI 154 (644)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g---~~~i 154 (644)
|+++|+ .+..|.||||.|+..+ ...+
T Consensus 72 -----------------------------------------------Ll~~g~----~~~~G~T~Lh~A~~~~~~~v~~l 100 (743)
T TIGR00870 72 -----------------------------------------------LLNLSC----RGAVGDTLLHAISLEYVDAVEAI 100 (743)
T ss_pred -----------------------------------------------HHhCCC----CCCcChHHHHHHHhccHHHHHHH
Confidence 445554 4567889999888732 2334
Q ss_pred HHHHhcCCCCC------c----cccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcC------------CCCCchHH
Q psy2733 155 QLLLLSHPEVN------L----YLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPK------------TSDGFTPL 212 (644)
Q Consensus 155 v~~Ll~~~~~~------~----~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~------------d~~g~T~L 212 (644)
+..+.. .+.+ + ......|.||||+|+.+|+.++++.|++.|++++.... ...|.|||
T Consensus 101 l~~l~~-~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL 179 (743)
T TIGR00870 101 LLHLLA-AFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPL 179 (743)
T ss_pred HHHHhh-cccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHH
Confidence 444444 2211 1 11234689999999999999999999999888764211 13589999
Q ss_pred HHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcC---------CHHHHHHHHHCCCCC-------CcccCCCC
Q psy2733 213 HVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQG---------QTSVINYLMLRDVAL-------DIQDIDGN 276 (644)
Q Consensus 213 h~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g---------~~~iv~~Ll~~gadv-------n~~d~~G~ 276 (644)
|.|+..|+.+++++|++. |++++.+|..|+||||+|+..+ ...+.+++++.++.. +..|.+|.
T Consensus 180 ~~Aa~~~~~~iv~lLl~~-gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~ 258 (743)
T TIGR00870 180 NAAACLGSPSIVALLSED-PADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGL 258 (743)
T ss_pred HHHHHhCCHHHHHHHhcC-CcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCC
Confidence 999999999999999988 7999999999999999999987 234666777665554 66799999
Q ss_pred cHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhh
Q psy2733 277 GLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 277 T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~ 347 (644)
||||+|+..++ .+++++|++.+++.......+..|.+.+.
T Consensus 259 TPL~~A~~~g~-------------------------------~~l~~lLL~~~~~~kk~~a~~~~~~~~~~ 298 (743)
T TIGR00870 259 TPLKLAAKEGR-------------------------------IVLFRLKLAIKYKQKKFVAWPNGQQLLSL 298 (743)
T ss_pred CchhhhhhcCC-------------------------------ccHHHHHHHHHHhcceeeccCcchHhHhh
Confidence 99999999998 55888888866554444445555555443
No 46
>KOG0507|consensus
Probab=99.91 E-value=4.3e-24 Score=228.43 Aligned_cols=237 Identities=23% Similarity=0.248 Sum_probs=180.8
Q ss_pred HHHHHHHcCCHHHHHHHHHC-------------CCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhh
Q psy2733 3 LLHILAYQGCVEELNILLAR-------------GACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKER 69 (644)
Q Consensus 3 pLh~Aa~~G~~e~vk~LL~~-------------Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~ 69 (644)
=|--|+..|+++.+..||+. ..+.|..|.+|.|+||.|+.+|+.+++++|
T Consensus 6 el~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~ll----------------- 68 (854)
T KOG0507|consen 6 ELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLL----------------- 68 (854)
T ss_pred hHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHH-----------------
Confidence 46789999999999999985 134677899999999999999999999985
Q ss_pred hhccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy2733 70 HRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAK 149 (644)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~ 149 (644)
+++.+-++..|..|.+|||+|++.
T Consensus 69 --------------------------------------------------------le~ea~ldl~d~kg~~plhlaaw~ 92 (854)
T KOG0507|consen 69 --------------------------------------------------------LDYEALLDLCDTKGILPLHLAAWN 92 (854)
T ss_pred --------------------------------------------------------hcchhhhhhhhccCcceEEehhhc
Confidence 333333334556777788888888
Q ss_pred CCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHH
Q psy2733 150 GFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVE 229 (644)
Q Consensus 150 g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~ 229 (644)
|+.+++++|+. .+..+|..+-.|.||||.|+..|+.+++.+|+.++++... .+..+.|+|.+|++.|..++|+.|+.
T Consensus 93 g~~e~vkmll~-q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i--~nns~~t~ldlA~qfgr~~Vvq~ll~ 169 (854)
T KOG0507|consen 93 GNLEIVKMLLL-QTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFI--RNNSKETVLDLASRFGRAEVVQMLLQ 169 (854)
T ss_pred CcchHHHHHHh-cccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccc--cCcccccHHHHHHHhhhhHHHHHHhh
Confidence 88888887777 5677777777788888888888888888888887777665 55677788888888888888887776
Q ss_pred hcCCCc--------ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchh
Q psy2733 230 KYKVNI--------NALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPI 301 (644)
Q Consensus 230 ~~g~~i--------n~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~ 301 (644)
. ...+ ..++..+.+|||+|+++|+.++++.|++.|.|+|.....| |+||.|+..|.
T Consensus 170 ~-~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk-------------- 233 (854)
T KOG0507|consen 170 K-KFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGK-------------- 233 (854)
T ss_pred h-ccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCc--------------
Confidence 5 2221 2344566778888888888888888888888888776655 78888887777
Q ss_pred HHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhc
Q psy2733 302 YEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILE 348 (644)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~ 348 (644)
.+++.+|++.|.+..++|.+|+|+|++...
T Consensus 234 -----------------~evvr~ll~~gin~h~~n~~~qtaldil~d 263 (854)
T KOG0507|consen 234 -----------------AEVVRFLLEIGINTHIKNQHGQTALDIIID 263 (854)
T ss_pred -----------------chhhhHHHhhccccccccccchHHHHHHHh
Confidence 558888888888888888888888877764
No 47
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.91 E-value=5.5e-23 Score=240.89 Aligned_cols=194 Identities=18% Similarity=0.228 Sum_probs=171.9
Q ss_pred CCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCCC
Q psy2733 11 GCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPE 90 (644)
Q Consensus 11 G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (644)
...++-..+.+.++. ..+.++.++|+.||..|+.++++.
T Consensus 505 ~~l~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~--------------------------------------- 543 (823)
T PLN03192 505 HDLNVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEE--------------------------------------- 543 (823)
T ss_pred ccccHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHH---------------------------------------
Confidence 344555555555553 245567899999999999998876
Q ss_pred CcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccC
Q psy2733 91 TPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLEN 170 (644)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d 170 (644)
|++.|+++|..|..|.||||+|+..|+.+++++|++ .|++++.+|
T Consensus 544 ----------------------------------Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~-~gadin~~d 588 (823)
T PLN03192 544 ----------------------------------LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLK-HACNVHIRD 588 (823)
T ss_pred ----------------------------------HHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHh-cCCCCCCcC
Confidence 788899999999999999999999999999999999 799999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHH
Q psy2733 171 SKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAV 250 (644)
Q Consensus 171 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa 250 (644)
.+|.||||+|+..|+.++++.|++.++... ...|.++||.|+..|+.++++.|+++ |+++|.+|.+|.||||+|+
T Consensus 589 ~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~----~~~~~~~L~~Aa~~g~~~~v~~Ll~~-Gadin~~d~~G~TpLh~A~ 663 (823)
T PLN03192 589 ANGNTALWNAISAKHHKIFRILYHFASISD----PHAAGDLLCTAAKRNDLTAMKELLKQ-GLNVDSEDHQGATALQVAM 663 (823)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhcCcccC----cccCchHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999998776543 25678999999999999999999998 8999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCC-CcHHHHHHHc
Q psy2733 251 GQGQTSVINYLMLRDVALDIQDIDG-NGLLHFLFIK 285 (644)
Q Consensus 251 ~~g~~~iv~~Ll~~gadvn~~d~~G-~T~Lh~A~~~ 285 (644)
..|+.+++++|+++|++++..|..| .||+.++...
T Consensus 664 ~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 664 AEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELL 699 (823)
T ss_pred HCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999988 8998877543
No 48
>KOG0502|consensus
Probab=99.89 E-value=3.6e-24 Score=197.82 Aligned_cols=224 Identities=21% Similarity=0.151 Sum_probs=195.3
Q ss_pred HHHHHHcCCHHHHHHHHHCCCC-CcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCC
Q psy2733 4 LHILAYQGCVEELNILLARGAC-VYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 4 Lh~Aa~~G~~e~vk~LL~~Ga~-~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
+-.|.+.|+.+++..++....+ +...|.+|+.+++.|+-.++.+.+..+ ..++..|.
T Consensus 66 ~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgne--------------------- 124 (296)
T KOG0502|consen 66 LTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNE--------------------- 124 (296)
T ss_pred cchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCc---------------------
Confidence 4568888999999888877654 456678899999999999988888776 66666655
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-----HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-----DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQL 156 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-----v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~ 156 (644)
....+.+|+++++ ...++.....+|..|..|.|||+||+..|++.+|+
T Consensus 125 ---------------------------vs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~ 177 (296)
T KOG0502|consen 125 ---------------------------VSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQ 177 (296)
T ss_pred ---------------------------cccccCChhhHHHHHHHHHHHHHHhhccccCccccCchHhHHHHhcCchHHHH
Confidence 6667778888776 22233345678999999999999999999999999
Q ss_pred HHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcc
Q psy2733 157 LLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNIN 236 (644)
Q Consensus 157 ~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in 236 (644)
+||+ .|++++...+...++|++|++.|..++|++||..+.+++. -|-+|-|||.+|++.|+.++++.|++. |++++
T Consensus 178 fLL~-~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv--yDwNGgTpLlyAvrgnhvkcve~Ll~s-GAd~t 253 (296)
T KOG0502|consen 178 FLLN-SGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNV--YDWNGGTPLLYAVRGNHVKCVESLLNS-GADVT 253 (296)
T ss_pred HHHH-cCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce--eccCCCceeeeeecCChHHHHHHHHhc-CCCcc
Confidence 9999 8999999999999999999999999999999999998877 456899999999999999999999998 89999
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHH
Q psy2733 237 ALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLH 280 (644)
Q Consensus 237 ~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh 280 (644)
..|..|++++-+|+..|+. +|+..+++-++.+.+|+.-++|+|
T Consensus 254 ~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 254 QEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPLH 296 (296)
T ss_pred cccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCCC
Confidence 9999999999999999998 899999998888889888888775
No 49
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.89 E-value=1.8e-22 Score=236.47 Aligned_cols=175 Identities=19% Similarity=0.235 Sum_probs=161.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHH
Q psy2733 136 DNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVA 215 (644)
Q Consensus 136 d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A 215 (644)
+.++.++|+.|+..|+.++++.|++ .|++++..|..|.||||+|+..|+.++++.|+++|++++. .|.+|+||||+|
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~-~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~--~d~~G~TpL~~A 598 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLK-AKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHI--RDANGNTALWNA 598 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCC--cCCCCCCHHHHH
Confidence 4467799999999999999999999 7999999999999999999999999999999999988765 668999999999
Q ss_pred HhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccc
Q psy2733 216 CFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITR 295 (644)
Q Consensus 216 ~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~ 295 (644)
+..|+.+++++|++. +...+ ...|.++||.|+..|+.+++++|+++|+|+|.+|.+|+||||+|+..++
T Consensus 599 ~~~g~~~iv~~L~~~-~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~-------- 667 (823)
T PLN03192 599 ISAKHHKIFRILYHF-ASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDH-------- 667 (823)
T ss_pred HHhCCHHHHHHHHhc-CcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc--------
Confidence 999999999999976 44433 3567799999999999999999999999999999999999999999998
Q ss_pred cCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCC-CCcchhhh
Q psy2733 296 EKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNR-QKPLDLIL 347 (644)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G-~TpL~~A~ 347 (644)
.+++++|+++||+++.+|..| .||++++.
T Consensus 668 -----------------------~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~ 697 (823)
T PLN03192 668 -----------------------VDMVRLLIMNGADVDKANTDDDFSPTELRE 697 (823)
T ss_pred -----------------------HHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Confidence 779999999999999999998 99998875
No 50
>KOG0507|consensus
Probab=99.88 E-value=1e-22 Score=217.92 Aligned_cols=210 Identities=24% Similarity=0.342 Sum_probs=189.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
|+||.|+.+|+.+++++|++..+-++..|..|.+|||+|+..|+.|++++
T Consensus 51 Talhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkm------------------------------ 100 (854)
T KOG0507|consen 51 TLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKM------------------------------ 100 (854)
T ss_pred hHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHH------------------------------
Confidence 89999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcC
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 161 (644)
|+..+..+|.....|.||||.|++.|+.+++.+|++
T Consensus 101 -------------------------------------------ll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~- 136 (854)
T KOG0507|consen 101 -------------------------------------------LLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLK- 136 (854)
T ss_pred -------------------------------------------HHhcccCCCcccccCcCccchhhhhcchHHHHHHHh-
Confidence 555556677888899999999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCc------cCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCc
Q psy2733 162 PEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNL------ATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNI 235 (644)
Q Consensus 162 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~------~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~i 235 (644)
.++++-++++.+.|+|-.|++.|..++++.|++..-.. .....+..+-+|||+|+++|+.++++.|+.. |+++
T Consensus 137 ~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~a-g~di 215 (854)
T KOG0507|consen 137 KNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEA-GFDI 215 (854)
T ss_pred cCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhc-CCCc
Confidence 89999999999999999999999999999999862211 1222345677899999999999999999998 8999
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 236 NALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 236 n~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
|.....| |+||-|+..|..++|.+|++.|.+..++|.+|+|+|.+......
T Consensus 216 n~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~ 266 (854)
T KOG0507|consen 216 NYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQE 266 (854)
T ss_pred ccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcch
Confidence 9998876 99999999999999999999999999999999999998765433
No 51
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.88 E-value=2.4e-22 Score=234.02 Aligned_cols=207 Identities=24% Similarity=0.303 Sum_probs=155.7
Q ss_pred HHhC--CCCCCCCCCCCCcHHH-HHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcC---CHHHHHHHHHhcCC
Q psy2733 125 LLRN--GCNVNIQDNNQDTPMH-DAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRG---NMKVTEKILALNRN 198 (644)
Q Consensus 125 Ll~~--gad~n~~d~~G~TpL~-~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g---~~~~v~~Ll~~~~~ 198 (644)
+++. +.++|..|..|+|||| .|+.+++.+++++|++ .+. .+..|.||||.|+..+ ...+++.+...+..
T Consensus 36 lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~-~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~ 110 (743)
T TIGR00870 36 DLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLN-LSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRK 110 (743)
T ss_pred HhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHh-CCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccc
Confidence 4555 6788889999999999 8888999999999999 554 6778999999998732 22233333333322
Q ss_pred cc--------CCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC--------------CCCCCHHHHHHHcCCHH
Q psy2733 199 LA--------TVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD--------------LKKRTPLMAAVGQGQTS 256 (644)
Q Consensus 199 ~~--------~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d--------------~~G~TpL~~Aa~~g~~~ 256 (644)
.. ....+..|.||||+|+..|+.++|++|+++ |++++.++ ..|.||||+|+..|+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~-GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~ 189 (743)
T TIGR00870 111 SGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLER-GASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPS 189 (743)
T ss_pred cCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHH
Confidence 10 011224699999999999999999999998 89998653 36899999999999999
Q ss_pred HHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCC----
Q psy2733 257 VINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPL---- 332 (644)
Q Consensus 257 iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi---- 332 (644)
++++|+++|+|++.+|..|+||||+|+..+.... .+ ......+.+++++.++..
T Consensus 190 iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~----------~~------------~~l~~~~~~~l~~ll~~~~~~~ 247 (743)
T TIGR00870 190 IVALLSEDPADILTADSLGNTLLHLLVMENEFKA----------EY------------EELSCQMYNFALSLLDKLRDSK 247 (743)
T ss_pred HHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhH----------HH------------HHHHHHHHHHHHHHHhccCChH
Confidence 9999999999999999999999999998764210 00 011123556666655543
Q ss_pred ---CCCCCCCCCcchhhhcCC--cHHHHHHHH
Q psy2733 333 ---SLENNNRQKPLDLILEDT--SLLNEIMEH 359 (644)
Q Consensus 333 ---~~~n~~G~TpL~~A~~~~--~~~~~l~~~ 359 (644)
+++|.+|.|||++|++.+ ++.+.+++.
T Consensus 248 el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~ 279 (743)
T TIGR00870 248 ELEVILNHQGLTPLKLAAKEGRIVLFRLKLAI 279 (743)
T ss_pred hhhhhcCCCCCCchhhhhhcCCccHHHHHHHH
Confidence 778999999999999654 455555543
No 52
>KOG0505|consensus
Probab=99.88 E-value=2e-22 Score=209.46 Aligned_cols=225 Identities=29% Similarity=0.346 Sum_probs=191.2
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCC
Q psy2733 4 LHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSN 83 (644)
Q Consensus 4 Lh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (644)
+.-|++.|..+-|+.|+..|++++..+.+|.|+||-++...+.+||++
T Consensus 44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~-------------------------------- 91 (527)
T KOG0505|consen 44 FLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKF-------------------------------- 91 (527)
T ss_pred HHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHH--------------------------------
Confidence 345788999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCC
Q psy2733 84 LPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPE 163 (644)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~ 163 (644)
|+++|+++|..|..||||||.|+..|+..++++|++ .|
T Consensus 92 -----------------------------------------l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~-~g 129 (527)
T KOG0505|consen 92 -----------------------------------------LVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQ-HG 129 (527)
T ss_pred -----------------------------------------HHHhcCCccccccccCCcchhhcccccHHHHHHHHH-hh
Confidence 888999999999999999999999999999999999 79
Q ss_pred CCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcC----cH-HHHHHHHHhcCCCcccC
Q psy2733 164 VNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFND----HI-EIVELLVEKYKVNINAL 238 (644)
Q Consensus 164 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g----~~-~~v~~Ll~~~g~~in~~ 238 (644)
+++...+.+|..|+-.|..-...+++..-.... |-+ .-|++.- .. ++-.++ .. |.+.+..
T Consensus 130 A~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~-----------gi~--iea~R~~~e~~ml~D~~q~l-~~-G~~~d~~ 194 (527)
T KOG0505|consen 130 ANLLAVNSDGNMPYDLAEDEATLDVLETEMARQ-----------GID--IEAARKAEEQTMLDDARQWL-NA-GAELDAR 194 (527)
T ss_pred hhhhhccCCCCCccccccCcchhHHHHHHHHHh-----------ccc--HHHHhhhhHHHHHHHHHHHH-hc-ccccccc
Confidence 999999999999988877655555544433221 112 1122111 11 233333 33 7888999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchH
Q psy2733 239 DLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGIL 318 (644)
Q Consensus 239 d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (644)
+..|.|+||.|+.+|+.++.++|++.|.+++++|.+||||||.|+..+.
T Consensus 195 ~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~------------------------------- 243 (527)
T KOG0505|consen 195 HARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQ------------------------------- 243 (527)
T ss_pred ccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhh-------------------------------
Confidence 9889999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcchhhhc
Q psy2733 319 LAVFLFLVKHGAPLSLENNNRQKPLDLILE 348 (644)
Q Consensus 319 ~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~ 348 (644)
.+++++|+.+|++.+.++..|.||+++|.+
T Consensus 244 ~~~~elL~~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 244 EDACELLVEHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred HhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence 669999999999999999999999999974
No 53
>KOG0514|consensus
Probab=99.86 E-value=6.9e-22 Score=195.41 Aligned_cols=155 Identities=22% Similarity=0.365 Sum_probs=140.2
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHc-----CCHHHHHHHHHhcCCccCCcCCC
Q psy2733 132 VNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLR-----GNMKVTEKILALNRNLATVPKTS 206 (644)
Q Consensus 132 ~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~-----g~~~~v~~Ll~~~~~~~~~~~d~ 206 (644)
+|..|.+|+|+||||+.++|.++|+.||+..-.+++..+.-|+||+|+|+.. .+..+|..|+..| +++.. -..
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaK-AsQ 338 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAK-ASQ 338 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchh-hhh
Confidence 6889999999999999999999999999966689999999999999999864 3677899999876 33333 337
Q ss_pred CCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCcHHHHHHHc
Q psy2733 207 DGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLR-DVALDIQDIDGNGLLHFLFIK 285 (644)
Q Consensus 207 ~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~-gadvn~~d~~G~T~Lh~A~~~ 285 (644)
.|+|+||+|+.+|+.++|+.||.. |+|+|.+|.+|-|+||.|+..||.+++++||.. ++|+...|.+|.|+|++|...
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLac-gAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAlea 417 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLAC-GADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEA 417 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHc-cCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhc
Confidence 899999999999999999999987 899999999999999999999999999999955 899999999999999999999
Q ss_pred CCcc
Q psy2733 286 KNFY 289 (644)
Q Consensus 286 ~~~~ 289 (644)
|+.+
T Consensus 418 gh~e 421 (452)
T KOG0514|consen 418 GHRE 421 (452)
T ss_pred CchH
Confidence 9944
No 54
>KOG0514|consensus
Probab=99.85 E-value=2.2e-21 Score=191.91 Aligned_cols=162 Identities=28% Similarity=0.381 Sum_probs=144.0
Q ss_pred CcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcccccccccccccC
Q psy2733 26 VYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNED 105 (644)
Q Consensus 26 ~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (644)
+|.-|.+|+|+||||+.++++++|+.
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~------------------------------------------------------ 286 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSI------------------------------------------------------ 286 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHH------------------------------------------------------
Confidence 57789999999999999999999987
Q ss_pred CCCCCcccchhhHHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcC-----CHHHHHHHhcCCCCCcccc-CCCCCcHHH
Q psy2733 106 MLDTPSAECSGILIKQDFVLLRNG-CNVNIQDNNQDTPMHDAVAKG-----FEEIQLLLLSHPEVNLYLE-NSKGFNILN 178 (644)
Q Consensus 106 ~~~~~~~~~t~L~~a~v~~Ll~~g-ad~n~~d~~G~TpL~~A~~~g-----~~~iv~~Ll~~~~~~~~~~-d~~g~tpL~ 178 (644)
||+.| ++++.++..|+||+|+|+... +.++|..|... | ++|.+ ...|.|+||
T Consensus 287 -------------------LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-g-nVNaKAsQ~gQTALM 345 (452)
T KOG0514|consen 287 -------------------LLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM-G-DVNAKASQHGQTALM 345 (452)
T ss_pred -------------------HhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc-c-Ccchhhhhhcchhhh
Confidence 44443 788889999999999988643 67899999984 3 55554 467999999
Q ss_pred HHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHH
Q psy2733 179 YAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVI 258 (644)
Q Consensus 179 ~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv 258 (644)
+|+.+|+.++|+.||.-|++++. +|.+|.|+||.|+.+|+.+++++||...++|+...|.+|-|+|++|...|+.+|.
T Consensus 346 LAVSHGr~d~vk~LLacgAdVNi--QDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa 423 (452)
T KOG0514|consen 346 LAVSHGRVDMVKALLACGADVNI--QDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIA 423 (452)
T ss_pred hhhhcCcHHHHHHHHHccCCCcc--ccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHH
Confidence 99999999999999999999887 7789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHC
Q psy2733 259 NYLMLR 264 (644)
Q Consensus 259 ~~Ll~~ 264 (644)
-+|..+
T Consensus 424 ~mlYa~ 429 (452)
T KOG0514|consen 424 VMLYAH 429 (452)
T ss_pred HHHHHH
Confidence 888743
No 55
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.84 E-value=3.9e-20 Score=174.72 Aligned_cols=148 Identities=16% Similarity=0.170 Sum_probs=131.9
Q ss_pred hCCCCCCCCCCCCCcHHHHHHHcCCH----HHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHH---HHHHHHhcCCc
Q psy2733 127 RNGCNVNIQDNNQDTPMHDAVAKGFE----EIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKV---TEKILALNRNL 199 (644)
Q Consensus 127 ~~gad~n~~d~~G~TpL~~A~~~g~~----~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~---v~~Ll~~~~~~ 199 (644)
.+|++++..+.++.++||.|++.|+. +++++|++ .+..++..|..|+||||+|+..|+.+. +++|++.++++
T Consensus 8 ~~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~-~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi 86 (166)
T PHA02743 8 GNNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISG-DGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADI 86 (166)
T ss_pred ccchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhh-cchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCC
Confidence 36788888888999999999999997 56667777 788899999999999999999988654 89999999887
Q ss_pred cCCcCC-CCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCc
Q psy2733 200 ATVPKT-SDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNG 277 (644)
Q Consensus 200 ~~~~~d-~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T 277 (644)
.. ++ ..|+||||+|+..|+.+++++|+...|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|..
T Consensus 87 n~--~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 87 NA--RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS 163 (166)
T ss_pred CC--CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence 65 44 579999999999999999999996448999999999999999999999999999999999999999988753
No 56
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.83 E-value=4.1e-20 Score=174.58 Aligned_cols=146 Identities=18% Similarity=0.142 Sum_probs=127.7
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCH----HHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHH---HHHHHHhcCCC
Q psy2733 162 PEVNLYLENSKGFNILNYAVLRGNM----KVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEI---VELLVEKYKVN 234 (644)
Q Consensus 162 ~~~~~~~~d~~g~tpL~~A~~~g~~----~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~---v~~Ll~~~g~~ 234 (644)
.+++++..+.++.++||+|+..|+. ++++.|++.+..... .|..|+||||+|+..|+.+. +++|++. |++
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~--~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~-Gad 85 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHR--YDHHGRQCTHMVAWYDRANAVMKIELLVNM-GAD 85 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhc--cCCCCCcHHHHHHHhCccCHHHHHHHHHHc-CCC
Confidence 4566777888899999999999998 556667777765543 56889999999999987654 7899988 899
Q ss_pred cccCC-CCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCC
Q psy2733 235 INALD-LKKRTPLMAAVGQGQTSVINYLML-RDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPS 312 (644)
Q Consensus 235 in~~d-~~G~TpL~~Aa~~g~~~iv~~Ll~-~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (644)
+|.+| ..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~------------------------- 140 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRD------------------------- 140 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCC-------------------------
Confidence 99998 589999999999999999999995 799999999999999999999988
Q ss_pred CccchHHHHHHHHHHcCCCCCCCCCCCCC
Q psy2733 313 NEHGILLAVFLFLVKHGAPLSLENNNRQK 341 (644)
Q Consensus 313 ~~~~~~~~iv~~Ll~~Gadi~~~n~~G~T 341 (644)
.+++++|+++|++++.++..|.+
T Consensus 141 ------~~iv~~Ll~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 141 ------RRMMEILRANGAVCDDPLSIGLS 163 (166)
T ss_pred ------HHHHHHHHHcCCCCCCcccCCcc
Confidence 67999999999999999988754
No 57
>KOG4369|consensus
Probab=99.83 E-value=2.4e-21 Score=212.24 Aligned_cols=279 Identities=19% Similarity=0.184 Sum_probs=240.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcc-cCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYY-PDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~-~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+||.+|+-.||..+|+.|+++.++++. .|..++|+|-+|+..|+.++|++| ..++.-...+...++++..+....+..
T Consensus 792 ~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~ 871 (2131)
T KOG4369|consen 792 VPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTK 871 (2131)
T ss_pred hhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHH
Confidence 789999999999999999999999875 478899999999999999999999 888888777777777766655444332
Q ss_pred CCCCCCCCCCCCcccccccccccccCCC--CCCcccchhhHHHH-------HHHHHhCCCCCCCCC-CCCCcHHHHHHHc
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDML--DTPSAECSGILIKQ-------DFVLLRNGCNVNIQD-NNQDTPMHDAVAK 149 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d-~~G~TpL~~A~~~ 149 (644)
. +..+...+.+++ ...+.|.+||+++. ++.|++.|.|+|.+- .+.+|+|-+|+..
T Consensus 872 i---------------I~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fq 936 (2131)
T KOG4369|consen 872 I---------------IHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQ 936 (2131)
T ss_pred H---------------HHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeecccc
Confidence 2 222233332222 24456788999984 899999999999664 4778999999999
Q ss_pred CCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHH
Q psy2733 150 GFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVE 229 (644)
Q Consensus 150 g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~ 229 (644)
|..+++.+||. ..+++..+-+.|.|||+-++..|.+++-+.|+..|++.+.......-.|+|-+++..|+...|+.|++
T Consensus 937 gr~evv~lLLa-~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln 1015 (2131)
T KOG4369|consen 937 GRPEVVFLLLA-AQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLN 1015 (2131)
T ss_pred CcchHHHHHHH-HhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhC
Confidence 99999999999 79999999999999999999999999999999999998887766667799999999999999999998
Q ss_pred hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccC
Q psy2733 230 KYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREK 297 (644)
Q Consensus 230 ~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~ 297 (644)
. .+-++.++..|.|+|.+|+..|+...+.+|+++++|++.+|+.-.++++-|.++|++.++++....
T Consensus 1016 ~-~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv~~ 1082 (2131)
T KOG4369|consen 1016 G-DATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMVPP 1082 (2131)
T ss_pred C-ccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchhheeccccCc
Confidence 6 688999999999999999999999999999999999999999999999999999999988776544
No 58
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.80 E-value=7.4e-19 Score=179.11 Aligned_cols=145 Identities=20% Similarity=0.206 Sum_probs=94.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccC----CCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccccc
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPD----DAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEK 77 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d----~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~ 77 (644)
++||.|++.|+.+++++|+++||+++.++ ..|.||||+|+..++.+++++
T Consensus 35 ~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivkl-------------------------- 88 (300)
T PHA02884 35 NILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKL-------------------------- 88 (300)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHH--------------------------
Confidence 45666666677777777777777777653 467777777777777777665
Q ss_pred ccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCHHHHH
Q psy2733 78 VQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQ-DNNQDTPMHDAVAKGFEEIQL 156 (644)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~-d~~G~TpL~~A~~~g~~~iv~ 156 (644)
|+++|+++|.. +..|.||||+|+..|+.++++
T Consensus 89 -----------------------------------------------LL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivk 121 (300)
T PHA02884 89 -----------------------------------------------LIRYGADVNRYAEEAKITPLYISVLHGCLKCLE 121 (300)
T ss_pred -----------------------------------------------HHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHH
Confidence 56666666654 345777777777777777777
Q ss_pred HHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHh
Q psy2733 157 LLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEK 230 (644)
Q Consensus 157 ~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ 230 (644)
+|+. .|++++.+|..|.||||+|+..++..++..+...+ .+..+.+|++++ ++.+++++|+++
T Consensus 122 lLL~-~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~n~ei~~~Lish 184 (300)
T PHA02884 122 ILLS-YGADINIQTNDMVTPIELALMICNNFLAFMICDNE-------ISNFYKHPKKIL---INFDILKILVSH 184 (300)
T ss_pred HHHH-CCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCc-------ccccccChhhhh---ccHHHHHHHHHH
Confidence 7777 57777777777777777777766666654443211 224455666654 356666666665
No 59
>KOG0505|consensus
Probab=99.79 E-value=2e-19 Score=187.26 Aligned_cols=196 Identities=23% Similarity=0.247 Sum_probs=144.3
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
|+||.|+...+.++|++|+++|+++|..|.+||||||.|+..|+..++.+|
T Consensus 75 Talhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~l----------------------------- 125 (527)
T KOG0505|consen 75 TALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYL----------------------------- 125 (527)
T ss_pred hhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHH-----------------------------
Confidence 899999999999999999999999999999999999999999999999985
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcC
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 161 (644)
+.+|+++-..+.+|..|+-++..--..+++..-...
T Consensus 126 --------------------------------------------i~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r 161 (527)
T KOG0505|consen 126 --------------------------------------------IQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMAR 161 (527)
T ss_pred --------------------------------------------HHhhhhhhhccCCCCCccccccCcchhHHHHHHHHH
Confidence 444444444455555555544433333333333332
Q ss_pred CCCCccccCCCCCcHHHHHHHcC---CHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccC
Q psy2733 162 PEVNLYLENSKGFNILNYAVLRG---NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINAL 238 (644)
Q Consensus 162 ~~~~~~~~d~~g~tpL~~A~~~g---~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~ 238 (644)
.+++++ .+-... ...=++..+..|....... ..|.|.||.|+..|..++.++|+.. |.+++.+
T Consensus 162 ~gi~ie-----------a~R~~~e~~ml~D~~q~l~~G~~~d~~~--~rG~T~lHvAaa~Gy~e~~~lLl~a-g~~~~~~ 227 (527)
T KOG0505|consen 162 QGIDIE-----------AARKAEEQTMLDDARQWLNAGAELDARH--ARGATALHVAAANGYTEVAALLLQA-GYSVNIK 227 (527)
T ss_pred hcccHH-----------HHhhhhHHHHHHHHHHHHhccccccccc--cccchHHHHHHhhhHHHHHHHHHHh-ccCcccc
Confidence 222211 111111 1112333444555544432 3388999999999999999999988 7899999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHH
Q psy2733 239 DLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFI 284 (644)
Q Consensus 239 d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~ 284 (644)
|.+|+||||.|+..|..+++++|+++|++++.....|.||+-+|..
T Consensus 228 D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 228 DYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred cccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence 9999999999999999999999999999999999999999888764
No 60
>PHA02741 hypothetical protein; Provisional
Probab=99.79 E-value=8e-19 Score=166.45 Aligned_cols=135 Identities=13% Similarity=0.239 Sum_probs=119.0
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHhcC-----CCCCccccCCCCCcHHHHHHHcCC----HHHHHHHHHhcCCccCC
Q psy2733 132 VNIQDNNQDTPMHDAVAKGFEEIQLLLLSH-----PEVNLYLENSKGFNILNYAVLRGN----MKVTEKILALNRNLATV 202 (644)
Q Consensus 132 ~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~-----~~~~~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~~~~~ 202 (644)
++.+|..|.||||+|++.|+.++++.|+.. .+++++.+|..|.||||+|+..|+ .+++++|++.++++..
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~- 92 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA- 92 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-
Confidence 345778999999999999999999988542 367889999999999999999998 5889999999988765
Q ss_pred cCC-CCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q psy2733 203 PKT-SDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVAL 268 (644)
Q Consensus 203 ~~d-~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadv 268 (644)
++ ..|+||||+|+..++.+++++|+...|++++..|..|+||||+|+..|+.+++++|++.++..
T Consensus 93 -~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 93 -QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred -CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 34 489999999999999999999998558999999999999999999999999999999876553
No 61
>KOG0512|consensus
Probab=99.79 E-value=1.1e-18 Score=156.08 Aligned_cols=155 Identities=23% Similarity=0.271 Sum_probs=130.4
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCH
Q psy2733 176 ILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQT 255 (644)
Q Consensus 176 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~ 255 (644)
-+.+|+..+....|+.||+..++..+. +|.+|+||||.|+.+|+.++|+.|+.. |++++.+...|+||||.|+..++.
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNt-rD~D~YTpLHRAaYn~h~div~~ll~~-gAn~~a~T~~GWTPLhSAckWnN~ 143 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNT-RDEDEYTPLHRAAYNGHLDIVHELLLS-GANKEAKTNEGWTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccc-cccccccHHHHHHhcCchHHHHHHHHc-cCCcccccccCccchhhhhcccch
Confidence 366889999999999999988876665 458999999999999999999999987 899999999999999999999999
Q ss_pred HHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCC
Q psy2733 256 SVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLE 335 (644)
Q Consensus 256 ~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~ 335 (644)
+++-+|+.+|+|||+......||||+|+...+.. ..+.-+|.+.+.++..+
T Consensus 144 ~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r-----------------------------~t~~~Ll~dryi~pg~~ 194 (228)
T KOG0512|consen 144 EVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSR-----------------------------DTLELLLHDRYIHPGLK 194 (228)
T ss_pred hHHHHHHhccCcccccccccchhhHHhhcccchH-----------------------------HHHHHHhhccccChhhh
Confidence 9999999999999999999999999999877632 22334455778999999
Q ss_pred CCCCCCcchhhhcCCcHHHHHHHHhhh
Q psy2733 336 NNNRQKPLDLILEDTSLLNEIMEHARE 362 (644)
Q Consensus 336 n~~G~TpL~~A~~~~~~~~~l~~~~~~ 362 (644)
++.+.||+++|. ...+...|.+..+.
T Consensus 195 nn~eeta~~iAR-RT~~s~~lfe~~e~ 220 (228)
T KOG0512|consen 195 NNLEETAFDIAR-RTSMSHYLFEIVEG 220 (228)
T ss_pred cCccchHHHHHH-HhhhhHHHHHHHHH
Confidence 999999999998 44444445444443
No 62
>PHA02741 hypothetical protein; Provisional
Probab=99.78 E-value=2.2e-18 Score=163.43 Aligned_cols=131 Identities=20% Similarity=0.283 Sum_probs=115.8
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHh------cCCccCCcCCCCCchHHHHHHhcCc----HHHHHHHHHhcCCCccc
Q psy2733 168 LENSKGFNILNYAVLRGNMKVTEKILAL------NRNLATVPKTSDGFTPLHVACFNDH----IEIVELLVEKYKVNINA 237 (644)
Q Consensus 168 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~------~~~~~~~~~d~~g~T~Lh~A~~~g~----~~~v~~Ll~~~g~~in~ 237 (644)
.++..|.||||+|+..|+.++++.|+.. ++.+. ..|..|+||||+|+..|+ .+++++|++. |++++.
T Consensus 16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in--~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~-gadin~ 92 (169)
T PHA02741 16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALN--ATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL-GADINA 92 (169)
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhh--ccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc-CCCCCC
Confidence 4678899999999999999999998653 23333 356889999999999998 5889999987 899999
Q ss_pred CCC-CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCcc
Q psy2733 238 LDL-KKRTPLMAAVGQGQTSVINYLML-RDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEH 315 (644)
Q Consensus 238 ~d~-~G~TpL~~Aa~~g~~~iv~~Ll~-~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (644)
++. .|+||||+|+..++.+++++|++ .|++++.+|.+|+||||+|+..++
T Consensus 93 ~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~---------------------------- 144 (169)
T PHA02741 93 QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNED---------------------------- 144 (169)
T ss_pred CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCC----------------------------
Confidence 985 99999999999999999999997 599999999999999999999988
Q ss_pred chHHHHHHHHHHcCCCC
Q psy2733 316 GILLAVFLFLVKHGAPL 332 (644)
Q Consensus 316 ~~~~~iv~~Ll~~Gadi 332 (644)
.+++++|++.++..
T Consensus 145 ---~~iv~~L~~~~~~~ 158 (169)
T PHA02741 145 ---VAMMQILREIVATS 158 (169)
T ss_pred ---HHHHHHHHHHHHHh
Confidence 67999999887654
No 63
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.78 E-value=9.2e-19 Score=163.49 Aligned_cols=97 Identities=21% Similarity=0.220 Sum_probs=78.0
Q ss_pred CCCCchHHHHHHhcCcH---HHHHHHHHhcCCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCcccCCCCcHH
Q psy2733 205 TSDGFTPLHVACFNDHI---EIVELLVEKYKVNINALD-LKKRTPLMAAVGQGQTSVINYLML-RDVALDIQDIDGNGLL 279 (644)
Q Consensus 205 d~~g~T~Lh~A~~~g~~---~~v~~Ll~~~g~~in~~d-~~G~TpL~~Aa~~g~~~iv~~Ll~-~gadvn~~d~~G~T~L 279 (644)
|..|.||||+|+..|+. +++++|++. |++++.+| ..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||
T Consensus 52 d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL 130 (154)
T PHA02736 52 NRHGKQCVHIVSNPDKADPQEKLKLLMEW-GADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPY 130 (154)
T ss_pred cCCCCEEEEeecccCchhHHHHHHHHHHc-CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHH
Confidence 46788888888888775 457778877 78888887 478888888888888888888886 4888888888888888
Q ss_pred HHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCC
Q psy2733 280 HFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLS 333 (644)
Q Consensus 280 h~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~ 333 (644)
|+|+..++ .+++++|+++|++.+
T Consensus 131 ~~A~~~~~-------------------------------~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 131 YVACERHD-------------------------------AKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHcCC-------------------------------HHHHHHHHHcCCCCC
Confidence 88888777 668888888888765
No 64
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.76 E-value=2e-18 Score=161.24 Aligned_cols=134 Identities=18% Similarity=0.218 Sum_probs=111.8
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHhcC------CCCCccccCCCCCcHHHHHHHcCCHH---HHHHHHHhcCCccCC
Q psy2733 132 VNIQDNNQDTPMHDAVAKGFEEIQLLLLSH------PEVNLYLENSKGFNILNYAVLRGNMK---VTEKILALNRNLATV 202 (644)
Q Consensus 132 ~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~------~~~~~~~~d~~g~tpL~~A~~~g~~~---~v~~Ll~~~~~~~~~ 202 (644)
++..|.+|.||||+|++.|+.. .++... .+..++..|..|.||||+|+..|+.+ +++.|++.+++++.
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~- 86 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADING- 86 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccc-
Confidence 3556789999999999999842 222210 11123456889999999999999874 68899999988765
Q ss_pred cCC-CCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy2733 203 PKT-SDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALD 269 (644)
Q Consensus 203 ~~d-~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn 269 (644)
.+ ..|+||||+|+..|+.+++++|+...|++++.+|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 87 -~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 87 -KERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred -cCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 44 5899999999999999999999986589999999999999999999999999999999999875
No 65
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.76 E-value=1.3e-17 Score=170.10 Aligned_cols=141 Identities=13% Similarity=0.089 Sum_probs=112.3
Q ss_pred CCCCCCCc-HHHHHHHcCCHHHHHHHhcCCCCCccccC----CCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCC
Q psy2733 134 IQDNNQDT-PMHDAVAKGFEEIQLLLLSHPEVNLYLEN----SKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDG 208 (644)
Q Consensus 134 ~~d~~G~T-pL~~A~~~g~~~iv~~Ll~~~~~~~~~~d----~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g 208 (644)
.+|..|+| +||.|++.|+.+++++|++ .|++++.++ ..|.||||+|+..|+.+++++|++.|+++.... +..|
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~-~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~-~~~g 104 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILK-LGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYA-EEAK 104 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHH-CCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCccc-CCCC
Confidence 45666665 5666777789999999999 799998874 578999999999999999999999988876522 2568
Q ss_pred chHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHH
Q psy2733 209 FTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFL 282 (644)
Q Consensus 209 ~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A 282 (644)
.||||+|+..++.+++++|++. |++++.+|..|.||||+|+..++..++.++. |.. .+..+.+|++++
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~-GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~ 172 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSY-GADINIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL 172 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh
Confidence 8999999999999999999988 7999999999999999999888888776554 322 455667777764
No 66
>KOG0512|consensus
Probab=99.75 E-value=1.5e-17 Score=148.87 Aligned_cols=142 Identities=25% Similarity=0.205 Sum_probs=103.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCC-CcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCC
Q psy2733 4 LHILAYQGCVEELNILLARGAC-VYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPS 82 (644)
Q Consensus 4 Lh~Aa~~G~~e~vk~LL~~Ga~-~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (644)
+.+|+..|.+..|+.||+..++ +|.+|.+|+||||.|+.+|+.+||+.
T Consensus 67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~------------------------------- 115 (228)
T KOG0512|consen 67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHE------------------------------- 115 (228)
T ss_pred HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHH-------------------------------
Confidence 5678888888888888888776 78888888888888888888888876
Q ss_pred CCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCC
Q psy2733 83 NLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHP 162 (644)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 162 (644)
|+..|++++.+...||||||-|++.++.+++.+||+ .
T Consensus 116 ------------------------------------------ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLq-h 152 (228)
T KOG0512|consen 116 ------------------------------------------LLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQ-H 152 (228)
T ss_pred ------------------------------------------HHHccCCcccccccCccchhhhhcccchhHHHHHHh-c
Confidence 666777777777888888888888888888888888 6
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcC
Q psy2733 163 EVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFND 219 (644)
Q Consensus 163 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g 219 (644)
|++++.......||||+|+...+....-.+|-....+.....+..+.||+.+|-+.+
T Consensus 153 gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 153 GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred cCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence 888888887777888887766554433333323333333333455666666665554
No 67
>KOG0195|consensus
Probab=99.69 E-value=2.5e-17 Score=158.24 Aligned_cols=132 Identities=26% Similarity=0.349 Sum_probs=70.9
Q ss_pred HcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHH
Q psy2733 148 AKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELL 227 (644)
Q Consensus 148 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~L 227 (644)
+.|+.--+++-++....+.|.-|..|++|||+|++.|+..+++.|+..|+.++. .+....||||+|+..|+.++|+.|
T Consensus 9 regna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~--tnmgddtplhlaaahghrdivqkl 86 (448)
T KOG0195|consen 9 REGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNS--TNMGDDTPLHLAAAHGHRDIVQKL 86 (448)
T ss_pred hcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhccccccc--ccCCCCcchhhhhhcccHHHHHHH
Confidence 334333334334434555555555566666666666666666666555555443 222334555555555555555555
Q ss_pred HHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHH
Q psy2733 228 VEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFL 282 (644)
Q Consensus 228 l~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A 282 (644)
++. .+|+|..+..|+|||||||..|+..+.+-|+..|+.+++.++.|.|||..|
T Consensus 87 l~~-kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 87 LSR-KADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred HHH-hcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 554 455555555555555555555555555555555555555555555555543
No 68
>KOG0195|consensus
Probab=99.68 E-value=4.2e-17 Score=156.78 Aligned_cols=122 Identities=28% Similarity=0.345 Sum_probs=113.2
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcC
Q psy2733 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPK 204 (644)
Q Consensus 125 Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 204 (644)
|-+..-|.|.-|..|.+|||+|++.|+..+++.|+. .|+.+|..+....||||+|+..|+.++|+.|++..++++. .
T Consensus 20 ld~tehdln~gddhgfsplhwaakegh~aivemll~-rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna--v 96 (448)
T KOG0195|consen 20 LDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLS-RGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA--V 96 (448)
T ss_pred ecCcccccccccccCcchhhhhhhcccHHHHHHHHh-cccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch--h
Confidence 345567888899999999999999999999999999 7999999999999999999999999999999999998877 5
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHH
Q psy2733 205 TSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAV 250 (644)
Q Consensus 205 d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa 250 (644)
+..|+|||||||..|...+.+-|+.. |+.++..+++|.|||..|-
T Consensus 97 nehgntplhyacfwgydqiaedli~~-ga~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 97 NEHGNTPLHYACFWGYDQIAEDLISC-GAAVNICNKKGMTPLDKAK 141 (448)
T ss_pred hccCCCchhhhhhhcHHHHHHHHHhc-cceeeecccCCCCchhhhc
Confidence 57999999999999999999999998 8999999999999998873
No 69
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.67 E-value=4.7e-16 Score=130.79 Aligned_cols=89 Identities=33% Similarity=0.547 Sum_probs=63.3
Q ss_pred HHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccc
Q psy2733 212 LHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKT 291 (644)
Q Consensus 212 Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~ 291 (644)
||+|++.|+.+++++|++. +.+++. |.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++
T Consensus 1 L~~A~~~~~~~~~~~ll~~-~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---- 71 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEK-GADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGN---- 71 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHT-TSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTH----
T ss_pred CHHHHHcCCHHHHHHHHHC-cCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCC----
Confidence 5777777777777777775 555555 6777777777777777777777777777777777777777777766
Q ss_pred cccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCC
Q psy2733 292 PITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLEN 336 (644)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n 336 (644)
.+++++|+++|++++.+|
T Consensus 72 ---------------------------~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 72 ---------------------------LEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp ---------------------------HHHHHHHHHTTT-TTSS-
T ss_pred ---------------------------HHHHHHHHHcCCCCCCcC
Confidence 567777777777777665
No 70
>KOG3676|consensus
Probab=99.65 E-value=6.9e-16 Score=168.36 Aligned_cols=188 Identities=24% Similarity=0.299 Sum_probs=151.7
Q ss_pred CcHHHHHHHcCCHHHHHHHhcCC--------CCCccccCCCCCcHHHHHHHc---CCHHHHHHHHHhcCCccCCcC---C
Q psy2733 140 DTPMHDAVAKGFEEIQLLLLSHP--------EVNLYLENSKGFNILNYAVLR---GNMKVTEKILALNRNLATVPK---T 205 (644)
Q Consensus 140 ~TpL~~A~~~g~~~iv~~Ll~~~--------~~~~~~~d~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~~---d 205 (644)
+.++..|...+..+....|+... ..+++.+..-|.|.||.|..+ ++.++++.|++..+...+..- .
T Consensus 102 ~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ee 181 (782)
T KOG3676|consen 102 RDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEE 181 (782)
T ss_pred hhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHh
Confidence 36777788888777777776632 256777778899999999974 456889999987765543221 2
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcCCCcccC---------C--------------CCCCCHHHHHHHcCCHHHHHHHH
Q psy2733 206 SDGFTPLHVACFNDHIEIVELLVEKYKVNINAL---------D--------------LKKRTPLMAAVGQGQTSVINYLM 262 (644)
Q Consensus 206 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~---------d--------------~~G~TpL~~Aa~~g~~~iv~~Ll 262 (644)
-.|.||||+|+.+.+.++|++|++. |+|++++ | ..|..||-+||.-++.+++++|+
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~-gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAA-GADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHc-CCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 3589999999999999999999998 8988653 1 24789999999999999999999
Q ss_pred HCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCC--CCCCCCCCC
Q psy2733 263 LRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAP--LSLENNNRQ 340 (644)
Q Consensus 263 ~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gad--i~~~n~~G~ 340 (644)
++|||++++|.+|+|.||+.+..-. .++..+++++|++ ..++|+.|.
T Consensus 261 ~~gAd~~aqDS~GNTVLH~lVi~~~-------------------------------~~My~~~L~~ga~~l~~v~N~qgL 309 (782)
T KOG3676|consen 261 AHGADPNAQDSNGNTVLHMLVIHFV-------------------------------TEMYDLALELGANALEHVRNNQGL 309 (782)
T ss_pred hcCCCCCccccCCChHHHHHHHHHH-------------------------------HHHHHHHHhcCCCccccccccCCC
Confidence 9999999999999999999998743 6789999999999 899999999
Q ss_pred CcchhhhcCCc--HHHHHHHH
Q psy2733 341 KPLDLILEDTS--LLNEIMEH 359 (644)
Q Consensus 341 TpL~~A~~~~~--~~~~l~~~ 359 (644)
|||.+|++-++ +.+.+++.
T Consensus 310 TPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 310 TPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred ChHHHHHHhhhHHHHHHHHHh
Confidence 99999996543 34444444
No 71
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.63 E-value=2.2e-15 Score=126.65 Aligned_cols=89 Identities=29% Similarity=0.459 Sum_probs=78.7
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHH
Q psy2733 177 LNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTS 256 (644)
Q Consensus 177 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~ 256 (644)
||+|+..|+.++++.|++.+.+... |.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLEN-GADINSQDKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHT-TTCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHh-cccccccCCCCCCHHHHHHHcCCHH
Confidence 7899999999999999997765432 78999999999999999999998 8999999999999999999999999
Q ss_pred HHHHHHHCCCCCCccc
Q psy2733 257 VINYLMLRDVALDIQD 272 (644)
Q Consensus 257 iv~~Ll~~gadvn~~d 272 (644)
++++|+++|++++.+|
T Consensus 74 ~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 74 IVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHHTTT-TTSS-
T ss_pred HHHHHHHcCCCCCCcC
Confidence 9999999999999876
No 72
>KOG3676|consensus
Probab=99.59 E-value=2.1e-14 Score=156.99 Aligned_cols=211 Identities=19% Similarity=0.226 Sum_probs=148.0
Q ss_pred cHHHHHHHcCCHHHHHHHHHCC---------CCCcccCCCCCcHHHHHHh---cCCHHHHHHHhhccCCCccchhhhhhh
Q psy2733 2 TLLHILAYQGCVEELNILLARG---------ACVYYPDDAGDTALHYAAF---GNKPDAIQINSHVSGANRSRKHIYKER 69 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~G---------a~~n~~d~~G~TpLh~Aa~---~g~~eiv~lL~~~a~~~~~~~~~~~~~ 69 (644)
.++..|...|.++....|+..+ .+++.+...|+|.||.|.. .++.++++.|.+.+.--.
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~li--------- 173 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLI--------- 173 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHh---------
Confidence 4677888888998888888776 6888899999999999997 445678877622211000
Q ss_pred hhccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHH
Q psy2733 70 HRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVN-IQDNNQDTPMHDAVA 148 (644)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n-~~d~~G~TpL~~A~~ 148 (644)
. |+- .....|.||||+|+.
T Consensus 174 ---------------------------------------------------------n---d~~~~eeY~GqSaLHiAIv 193 (782)
T KOG3676|consen 174 ---------------------------------------------------------N---DIYTSEEYYGQSALHIAIV 193 (782)
T ss_pred ---------------------------------------------------------h---hhhhhHhhcCcchHHHHHH
Confidence 0 000 112357777777777
Q ss_pred cCCHHHHHHHhcCCCCCcccc---------C--------------CCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCC
Q psy2733 149 KGFEEIQLLLLSHPEVNLYLE---------N--------------SKGFNILNYAVLRGNMKVTEKILALNRNLATVPKT 205 (644)
Q Consensus 149 ~g~~~iv~~Ll~~~~~~~~~~---------d--------------~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d 205 (644)
+.+.++|++|++ .|+|++.+ | ..|..||-+|+-.++.+++++|++++++++. +|
T Consensus 194 ~~~~~~V~lLl~-~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~a--qD 270 (782)
T KOG3676|consen 194 NRDAELVRLLLA-AGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNA--QD 270 (782)
T ss_pred hccHHHHHHHHH-cCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCc--cc
Confidence 777777777777 67776543 1 1356788888888888888888887777766 67
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcCCC--cccCCCCCCCHHHHHHHcCCHHHHHHHHHC-C-------------CCCC
Q psy2733 206 SDGFTPLHVACFNDHIEIVELLVEKYKVN--INALDLKKRTPLMAAVGQGQTSVINYLMLR-D-------------VALD 269 (644)
Q Consensus 206 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~--in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~-g-------------advn 269 (644)
+.|+|.||..+..-..++..++++. |++ ...+|..|.|||.+|+.-|..++.+.+++. . .+.+
T Consensus 271 S~GNTVLH~lVi~~~~~My~~~L~~-ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGpvtsslYpL~ 349 (782)
T KOG3676|consen 271 SNGNTVLHMLVIHFVTEMYDLALEL-GANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGPVTSSLYPLN 349 (782)
T ss_pred cCCChHHHHHHHHHHHHHHHHHHhc-CCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecccccccccch
Confidence 7888888888777777777888877 566 677778888888888888888888888766 1 2334
Q ss_pred cccC--CCCcHHHHHHHc
Q psy2733 270 IQDI--DGNGLLHFLFIK 285 (644)
Q Consensus 270 ~~d~--~G~T~Lh~A~~~ 285 (644)
..|. +.+++|.+.+..
T Consensus 350 ~iDT~~n~~SvLeivvyg 367 (782)
T KOG3676|consen 350 SIDTIGNENSVLEIVVYG 367 (782)
T ss_pred hcccccchhhhhhhhhcC
Confidence 4443 456677776654
No 73
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.58 E-value=4.7e-14 Score=125.32 Aligned_cols=114 Identities=33% Similarity=0.502 Sum_probs=63.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHH
Q psy2733 171 SKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAV 250 (644)
Q Consensus 171 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa 250 (644)
..|.||||+|+..++.++++.|++.+..... .+..|.||||.|+..++.+++++|++. +.+++..+..|.||+|+|+
T Consensus 5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~--~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~l~~a~ 81 (126)
T cd00204 5 EDGRTPLHLAASNGHLEVVKLLLENGADVNA--KDNDGRTPLHLAAKNGHLEIVKLLLEK-GADVNARDKDGNTPLHLAA 81 (126)
T ss_pred cCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc--cCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHH
Confidence 4455555555555555555555555544311 334555556666555555556655555 4455555555666666666
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 251 GQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 251 ~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
..++.+++++|+++|.+++..+..|.||+++|...++
T Consensus 82 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 118 (126)
T cd00204 82 RNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGH 118 (126)
T ss_pred HcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCC
Confidence 6666666666666665555566666666666655544
No 74
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.57 E-value=5.4e-14 Score=124.91 Aligned_cols=125 Identities=30% Similarity=0.513 Sum_probs=114.0
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHH
Q psy2733 134 IQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLH 213 (644)
Q Consensus 134 ~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh 213 (644)
..|.+|.||||+|+..|+.+++++|++ .+.+.+..+..|.+|||+|+..++.++++.|+..+..... .+..|.||+|
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~-~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~--~~~~~~~~l~ 78 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLE-NGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA--RDKDGNTPLH 78 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc--cCCCCCCHHH
Confidence 356789999999999999999999999 6877788999999999999999999999999999875443 4478899999
Q ss_pred HHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy2733 214 VACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLM 262 (644)
Q Consensus 214 ~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll 262 (644)
+|+..++.+++++|++. +.+++..|..|.||+++|...++.+++++|+
T Consensus 79 ~a~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 79 LAARNGNLDVVKLLLKH-GADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHHcCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 99999999999999998 7889999999999999999999999999884
No 75
>KOG4214|consensus
Probab=99.44 E-value=3.7e-13 Score=108.27 Aligned_cols=98 Identities=27% Similarity=0.383 Sum_probs=49.2
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHH
Q psy2733 177 LNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTS 256 (644)
Q Consensus 177 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~ 256 (644)
+.|++.+|..+-|+..+..+-+++. . -.|++|||+|+..|+.+++++|+.. |++++.+|+.|.|||..|+..||.+
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~--~-~ggR~plhyAAD~GQl~ilefli~i-GA~i~~kDKygITPLLsAvwEGH~~ 81 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNE--I-YGGRTPLHYAADYGQLSILEFLISI-GANIQDKDKYGITPLLSAVWEGHRD 81 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHH--H-hCCcccchHhhhcchHHHHHHHHHh-ccccCCccccCCcHHHHHHHHhhHH
Confidence 4455555555555555544432222 1 2445555555555555555555554 4555555555555555555555555
Q ss_pred HHHHHHHCCCCCCcccCCCCcH
Q psy2733 257 VINYLMLRDVALDIQDIDGNGL 278 (644)
Q Consensus 257 iv~~Ll~~gadvn~~d~~G~T~ 278 (644)
+|++|+++|+|-..+..+|.+.
T Consensus 82 cVklLL~~GAdrt~~~PdG~~~ 103 (117)
T KOG4214|consen 82 CVKLLLQNGADRTIHAPDGTAL 103 (117)
T ss_pred HHHHHHHcCcccceeCCCchhH
Confidence 5555555555554444444443
No 76
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.42 E-value=4e-12 Score=125.21 Aligned_cols=119 Identities=27% Similarity=0.319 Sum_probs=82.1
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCc-----HHHHHHHHHhcCC---Cccc
Q psy2733 166 LYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDH-----IEIVELLVEKYKV---NINA 237 (644)
Q Consensus 166 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~-----~~~v~~Ll~~~g~---~in~ 237 (644)
....+..+.++++.++..+...+++.++..+.++.. .+..|.||||+|+..++ .++++.|++. |+ ..+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~-g~~~~~~~~ 142 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNA--KDADGDTPLHLAALNGNPPEGNIEVAKLLLEA-GADLDVNNL 142 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCccc--ccCCCCcHHHHHHhcCCcccchHHHHHHHHHc-CCCCCCccc
Confidence 334455566777777777777777677766666533 44667777777777776 7777777776 45 5555
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 238 LDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 238 ~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
+|..|.||||+|+..|+.+++++|++.|++++.++..|.|++++|...++
T Consensus 143 ~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~ 192 (235)
T COG0666 143 RDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGR 192 (235)
T ss_pred cCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccch
Confidence 57777777777777777777777777777777777777777777777666
No 77
>KOG4214|consensus
Probab=99.41 E-value=8.8e-13 Score=106.13 Aligned_cols=105 Identities=21% Similarity=0.251 Sum_probs=93.6
Q ss_pred CcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcC
Q psy2733 140 DTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFND 219 (644)
Q Consensus 140 ~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g 219 (644)
.-.++|++++|..+-|+..+. .|.++|..- .|++|||+|+-.|..+++++|+..|+++.. +|+.|-|||..|+..|
T Consensus 3 d~~~~W~vkNG~~DeVk~~v~-~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~--kDKygITPLLsAvwEG 78 (117)
T KOG4214|consen 3 DMSVAWNVKNGEIDEVKQSVN-EGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQD--KDKYGITPLLSAVWEG 78 (117)
T ss_pred chhHhhhhccCcHHHHHHHHH-ccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCC--ccccCCcHHHHHHHHh
Confidence 346789999999999998888 677887655 899999999999999999999999998876 7789999999999999
Q ss_pred cHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q psy2733 220 HIEIVELLVEKYKVNINALDLKKRTPLMAA 249 (644)
Q Consensus 220 ~~~~v~~Ll~~~g~~in~~d~~G~TpL~~A 249 (644)
+.++|++|+.+ |++-.....+|.+.+..+
T Consensus 79 H~~cVklLL~~-GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 79 HRDCVKLLLQN-GADRTIHAPDGTALIEAT 107 (117)
T ss_pred hHHHHHHHHHc-CcccceeCCCchhHHhhc
Confidence 99999999999 899988888998776544
No 78
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.40 E-value=2.8e-12 Score=126.27 Aligned_cols=132 Identities=29% Similarity=0.444 Sum_probs=121.0
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCC-----HHHHHHHHHhcC--CccCCc
Q psy2733 131 NVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGN-----MKVTEKILALNR--NLATVP 203 (644)
Q Consensus 131 d~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~-----~~~v~~Ll~~~~--~~~~~~ 203 (644)
.....+..+.++++.++..+..+++++++. .+++++.++..|.||||+|+..++ .++++.|++.++ .... .
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~-~ 142 (235)
T COG0666 65 HLAARDLDGRLPLHSAASKGDDKIVKLLLA-SGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNN-L 142 (235)
T ss_pred ccccCCccccCHHHHHHHcCcHHHHHHHHH-cCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcc-c
Confidence 334556678999999999999999999999 899999999999999999999999 999999999999 3433 3
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy2733 204 KTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRD 265 (644)
Q Consensus 204 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~g 265 (644)
.+..|+||||+|+..|+.+++++|++. |++++.++..|.|++++|+..++.++++.+++.+
T Consensus 143 ~~~~g~tpl~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 143 RDEDGNTPLHWAALNGDADIVELLLEA-GADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred cCCCCCchhHHHHHcCchHHHHHHHhc-CCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 468999999999999999999999998 8999999999999999999999999999999975
No 79
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.34 E-value=1.8e-12 Score=97.85 Aligned_cols=52 Identities=37% Similarity=0.503 Sum_probs=44.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN 52 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL 52 (644)
+||||+||+.|+.+++++|++.|++++.+|.+|+||||+|+..|+.+++++|
T Consensus 2 ~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L 53 (54)
T PF13637_consen 2 RTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFL 53 (54)
T ss_dssp SBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999986
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.33 E-value=6e-12 Score=143.91 Aligned_cols=106 Identities=21% Similarity=0.180 Sum_probs=91.7
Q ss_pred hHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcc
Q psy2733 210 TPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFY 289 (644)
Q Consensus 210 T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~ 289 (644)
+.|+.|+..|+.+.+++|++. |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~-Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~-- 160 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTG-GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGF-- 160 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc--
Confidence 458888888999999998887 78899899999999999999999999999999999999999999999999998888
Q ss_pred cccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHc-------CCCCCCCCCCCCCcchhhh
Q psy2733 290 KTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKH-------GAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~-------Gadi~~~n~~G~TpL~~A~ 347 (644)
.+++++|+++ |++++..+..|.+|+..+.
T Consensus 161 -----------------------------~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 161 -----------------------------REVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred -----------------------------HHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 6788888888 8888888888888876654
No 81
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.31 E-value=1.8e-12 Score=98.47 Aligned_cols=56 Identities=30% Similarity=0.427 Sum_probs=33.7
Q ss_pred HHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHH
Q psy2733 227 LVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFL 282 (644)
Q Consensus 227 Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A 282 (644)
||+++..+++.+|..|.||||+|+.+|+.+++++|++.|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 45663489999999999999999999999999999999999999999999999987
No 82
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.30 E-value=9.7e-12 Score=142.21 Aligned_cols=106 Identities=28% Similarity=0.292 Sum_probs=96.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCC
Q psy2733 3 LLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPS 82 (644)
Q Consensus 3 pLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (644)
.||.||..|+.+.+++|++.|+++|.+|..|+||||+|+..|+.+++++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~------------------------------- 133 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRV------------------------------- 133 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHH-------------------------------
Confidence 5899999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcC-
Q psy2733 83 NLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH- 161 (644)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~- 161 (644)
|+++|+++|.+|..|.||||+|+..|+.+++++|+++
T Consensus 134 ------------------------------------------LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 171 (664)
T PTZ00322 134 ------------------------------------------LLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHS 171 (664)
T ss_pred ------------------------------------------HHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCC
Confidence 8888999999999999999999999999999999983
Q ss_pred -----CCCCccccCCCCCcHHHHHH
Q psy2733 162 -----PEVNLYLENSKGFNILNYAV 181 (644)
Q Consensus 162 -----~~~~~~~~d~~g~tpL~~A~ 181 (644)
.+++.+..+..|.+|+..+.
T Consensus 172 ~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 172 QCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred CcccccCCCCCccccCCCCccchhh
Confidence 27777777888888876554
No 83
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=3.3e-12 Score=97.09 Aligned_cols=55 Identities=25% Similarity=0.351 Sum_probs=33.1
Q ss_pred HHHCC-CCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCC
Q psy2733 261 LMLRD-VALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNR 339 (644)
Q Consensus 261 Ll~~g-advn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G 339 (644)
|+++| ++++.+|..|+||||+|+..++ .+++++|+++|++++.+|.+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~-------------------------------~~~v~~Ll~~g~d~~~~d~~G 49 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGH-------------------------------SEVVRLLLQNGADPNAKDKDG 49 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT--------------------------------HHHHHHHHHCT--TT---TTS
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCc-------------------------------HHHHHHHHHCcCCCCCCcCCC
Confidence 67788 9999999999999999999999 789999999999999999999
Q ss_pred CCcchhh
Q psy2733 340 QKPLDLI 346 (644)
Q Consensus 340 ~TpL~~A 346 (644)
+||||+|
T Consensus 50 ~Tpl~~A 56 (56)
T PF13857_consen 50 QTPLHYA 56 (56)
T ss_dssp --HHHH-
T ss_pred CCHHHhC
Confidence 9999997
No 84
>KOG1710|consensus
Probab=99.26 E-value=2.8e-11 Score=117.01 Aligned_cols=120 Identities=27% Similarity=0.265 Sum_probs=108.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
++||.-|...|+.+.+..||+---++|.+|..|+|+|+.|+..|+.++|++
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~l----------------------------- 63 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVEL----------------------------- 63 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHH-----------------------------
Confidence 468999999999999999998766689999999999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHh
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNI-QDNNQDTPMHDAVAKGFEEIQLLLL 159 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~-~d~~G~TpL~~A~~~g~~~iv~~Ll 159 (644)
|++.|+|+|. ++..++||||+|+..|+.++.++|+
T Consensus 64 --------------------------------------------ll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrlll 99 (396)
T KOG1710|consen 64 --------------------------------------------LLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLL 99 (396)
T ss_pred --------------------------------------------HHHhCCCcCcccccccccHHHHHHHcCCchHHHHHH
Confidence 7777777774 4567999999999999999999999
Q ss_pred cCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy2733 160 SHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILA 194 (644)
Q Consensus 160 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 194 (644)
+ .|+.....+.-|+|+-.+|+.-|+.++|..+-.
T Consensus 100 d-aGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 100 D-AGARMYLVNSVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred h-ccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence 9 899999999999999999999999999987654
No 85
>KOG1710|consensus
Probab=99.23 E-value=4.4e-11 Score=115.70 Aligned_cols=122 Identities=21% Similarity=0.347 Sum_probs=108.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHh
Q psy2733 138 NQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACF 217 (644)
Q Consensus 138 ~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~ 217 (644)
....||.-++..|..+-...||+ .-..+|.+|..|.++|..|+.+|+.++|+.|++.|++++.... ..++||||+|+.
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs-~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qh-g~~YTpLmFAAL 88 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLS-TVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQH-GTLYTPLMFAAL 88 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHH-HhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccc-cccccHHHHHHH
Confidence 44578999999999999999998 4556889999999999999999999999999999999877654 789999999999
Q ss_pred cCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy2733 218 NDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLM 262 (644)
Q Consensus 218 ~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll 262 (644)
.|+.++.++|++. |+.....|.-|+|+-.+|+--|+.++|..+-
T Consensus 89 SGn~dvcrlllda-Ga~~~~vNsvgrTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 89 SGNQDVCRLLLDA-GARMYLVNSVGRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred cCCchHHHHHHhc-cCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence 9999999999998 8999999999999999999999988887664
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.21 E-value=2.7e-11 Score=91.45 Aligned_cols=54 Identities=43% Similarity=0.657 Sum_probs=43.9
Q ss_pred CchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy2733 208 GFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLM 262 (644)
Q Consensus 208 g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll 262 (644)
|+||||+|++.|+.+++++|++. |.+++.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~-~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEH-GADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHT-TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 67999999999999999999988 8999999999999999999999999999986
No 87
>KOG4172|consensus
Probab=99.11 E-value=1.4e-12 Score=92.69 Aligned_cols=48 Identities=38% Similarity=0.863 Sum_probs=42.2
Q ss_pred CcccccccCCcCeEEe-cCc-ccchhhhhcCC-----CCccccccccceEEEEEe
Q psy2733 479 NTCTICMERCRNTIFL-CGH-GTCDVCAKTLK-----FCHMCRKLIEQRINISRA 526 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH-~~C~~C~~~~~-----~Cp~Cr~~i~~~~~~~~~ 526 (644)
.+|.||+|.+.+.|+. ||| +.|..|+.++. .||+||.+|+.+|+.|++
T Consensus 8 dECTICye~pvdsVlYtCGHMCmCy~Cg~rl~~~~~g~CPiCRapi~dvIkTY~s 62 (62)
T KOG4172|consen 8 DECTICYEHPVDSVLYTCGHMCMCYACGLRLKKALHGCCPICRAPIKDVIKTYRS 62 (62)
T ss_pred cceeeeccCcchHHHHHcchHHhHHHHHHHHHHccCCcCcchhhHHHHHHHhhcC
Confidence 4599999999999999 999 45999999763 699999999999977763
No 88
>KOG0515|consensus
Probab=99.11 E-value=2.4e-10 Score=118.75 Aligned_cols=102 Identities=26% Similarity=0.305 Sum_probs=87.3
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHH
Q psy2733 177 LNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTS 256 (644)
Q Consensus 177 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~ 256 (644)
|.-|+..|-+++|+.++..-.++.. -+.+|-|+||-|+..|+++||++|++. |+++|..|.+||||||.||..+++.
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSq--pNdEGITaLHNAiCaghyeIVkFLi~~-ganVNa~DSdGWTPLHCAASCNnv~ 630 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQ--PNDEGITALHNAICAGHYEIVKFLIEF-GANVNAADSDGWTPLHCAASCNNVP 630 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCC--CCccchhHHhhhhhcchhHHHHHHHhc-CCcccCccCCCCchhhhhhhcCchH
Confidence 3448889999999999876655543 457899999999999999999999998 8999999999999999999999999
Q ss_pred HHHHHHHCCCCCCccc-CCCCcHHHH
Q psy2733 257 VINYLMLRDVALDIQD-IDGNGLLHF 281 (644)
Q Consensus 257 iv~~Ll~~gadvn~~d-~~G~T~Lh~ 281 (644)
+++.|++.|+-|-+.. .++.|+..-
T Consensus 631 ~ckqLVe~GaavfAsTlSDmeTa~eK 656 (752)
T KOG0515|consen 631 MCKQLVESGAAVFASTLSDMETAAEK 656 (752)
T ss_pred HHHHHHhccceEEeeecccccchhhh
Confidence 9999999998875543 677777654
No 89
>KOG0515|consensus
Probab=99.11 E-value=2.2e-10 Score=119.02 Aligned_cols=97 Identities=18% Similarity=0.174 Sum_probs=66.1
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCch
Q psy2733 131 NVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFT 210 (644)
Q Consensus 131 d~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T 210 (644)
|+...+..|-|+||.|+..||.+||++|++ .|+++|..|.+||||||.|+..++..+++.|++.|+.+....- +++.|
T Consensus 575 DpSqpNdEGITaLHNAiCaghyeIVkFLi~-~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTl-SDmeT 652 (752)
T KOG0515|consen 575 DPSQPNDEGITALHNAICAGHYEIVKFLIE-FGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTL-SDMET 652 (752)
T ss_pred CCCCCCccchhHHhhhhhcchhHHHHHHHh-cCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeec-ccccc
Confidence 334445567777777777777777777777 6777777777777777777777777777777777766655444 56667
Q ss_pred HHHHHH--hcCcHHHHHHHHH
Q psy2733 211 PLHVAC--FNDHIEIVELLVE 229 (644)
Q Consensus 211 ~Lh~A~--~~g~~~~v~~Ll~ 229 (644)
+....- +.|...+.++|..
T Consensus 653 a~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 653 AAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred hhhhcchhhhhHHHHHHHHHH
Confidence 665542 4567777777764
No 90
>KOG4275|consensus
Probab=98.96 E-value=1.1e-10 Score=112.64 Aligned_cols=49 Identities=41% Similarity=0.939 Sum_probs=45.4
Q ss_pred cCcccccccCCcCeEEe-cCc-ccchhhhhcCCCCccccccccceEEEEEe
Q psy2733 478 MNTCTICMERCRNTIFL-CGH-GTCDVCAKTLKFCHMCRKLIEQRINISRA 526 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~-CgH-~~C~~C~~~~~~Cp~Cr~~i~~~~~~~~~ 526 (644)
...|.||||.+++.+|+ ||| +.|..|.++|..||+||+.|.+.+++|++
T Consensus 300 ~~LC~ICmDaP~DCvfLeCGHmVtCt~CGkrm~eCPICRqyi~rvvrif~~ 350 (350)
T KOG4275|consen 300 RRLCAICMDAPRDCVFLECGHMVTCTKCGKRMNECPICRQYIVRVVRIFRV 350 (350)
T ss_pred HHHHHHHhcCCcceEEeecCcEEeehhhccccccCchHHHHHHHHHhhhcC
Confidence 57899999999999999 999 55999999999999999999999988763
No 91
>PF13920 zf-C3HC4_3: Zinc finger, C3HC4 type (RING finger); PDB: 2YHN_B 2YHO_G 3T6P_A 2CSY_A 2VJE_B 2VJF_B 2HDP_B 2EA5_A 2ECG_A 3EB5_A ....
Probab=98.85 E-value=9.4e-10 Score=81.34 Aligned_cols=43 Identities=44% Similarity=0.976 Sum_probs=36.9
Q ss_pred cCcccccccCCcCeEEe-cCcc-cchhhhhcC----CCCccccccccce
Q psy2733 478 MNTCTICMERCRNTIFL-CGHG-TCDVCAKTL----KFCHMCRKLIEQR 520 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~-CgH~-~C~~C~~~~----~~Cp~Cr~~i~~~ 520 (644)
+..|.||++.+.++++. |||. +|..|+.++ .+||+||++|+++
T Consensus 2 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~V 50 (50)
T PF13920_consen 2 DEECPICFENPRDVVLLPCGHLCFCEECAERLLKRKKKCPICRQPIESV 50 (50)
T ss_dssp HSB-TTTSSSBSSEEEETTCEEEEEHHHHHHHHHTTSBBTTTTBB-SEE
T ss_pred cCCCccCCccCCceEEeCCCChHHHHHHhHHhcccCCCCCcCChhhcCC
Confidence 45799999999999999 9996 899999976 7999999999853
No 92
>KOG0783|consensus
Probab=98.68 E-value=7.2e-09 Score=113.01 Aligned_cols=79 Identities=25% Similarity=0.342 Sum_probs=38.3
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHH
Q psy2733 204 KTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD-LKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFL 282 (644)
Q Consensus 204 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d-~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A 282 (644)
.|..|+|+||+|+..+...++++|+.+ |++++.+| ..|+||||.|+.+|+.+++-+|+++|+.+.++|++|..||.+.
T Consensus 48 kD~~GR~alH~~~S~~k~~~l~wLlqh-Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~ 126 (1267)
T KOG0783|consen 48 KDRYGRTALHIAVSENKNSFLRWLLQH-GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFL 126 (1267)
T ss_pred HHhhccceeeeeeccchhHHHHHHHhc-CceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHH
Confidence 334444555554444444445554444 44444444 2344555555555555554444444444444444444444444
Q ss_pred H
Q psy2733 283 F 283 (644)
Q Consensus 283 ~ 283 (644)
+
T Consensus 127 ~ 127 (1267)
T KOG0783|consen 127 S 127 (1267)
T ss_pred h
Confidence 3
No 93
>KOG0783|consensus
Probab=98.61 E-value=5e-08 Score=106.59 Aligned_cols=97 Identities=18% Similarity=0.186 Sum_probs=84.1
Q ss_pred HHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCC
Q psy2733 154 IQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKV 233 (644)
Q Consensus 154 iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~ 233 (644)
+-.++-++.+--.+++|..|+|+||+|+..+..+++++|+++|.++..... ..|+||||.|+..|+.+++.+||++ |+
T Consensus 33 lk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~-ESG~taLHRaiyyG~idca~lLL~~-g~ 110 (1267)
T KOG0783|consen 33 LKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDE-ESGYTALHRAIYYGNIDCASLLLSK-GR 110 (1267)
T ss_pred HHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccc-cccchHhhHhhhhchHHHHHHHHhc-CC
Confidence 334444444445789999999999999999999999999999998876544 7899999999999999999999998 89
Q ss_pred CcccCCCCCCCHHHHHHHc
Q psy2733 234 NINALDLKKRTPLMAAVGQ 252 (644)
Q Consensus 234 ~in~~d~~G~TpL~~Aa~~ 252 (644)
....+|..|..||..-++-
T Consensus 111 SL~i~Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 111 SLRIKDKEGLSPLQFLSRV 129 (1267)
T ss_pred ceEEecccCCCHHHHHhhc
Confidence 9999999999999887763
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=98.51 E-value=1.4e-07 Score=61.44 Aligned_cols=30 Identities=23% Similarity=0.496 Sum_probs=25.8
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCc
Q psy2733 241 KKRTPLMAAVGQGQTSVINYLMLRDVALDI 270 (644)
Q Consensus 241 ~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~ 270 (644)
+|+||||+|++.|+.+++++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 488899999999999999999998888873
No 95
>PF13606 Ank_3: Ankyrin repeat
Probab=98.51 E-value=1.2e-07 Score=61.63 Aligned_cols=28 Identities=39% Similarity=0.462 Sum_probs=26.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYY 28 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~ 28 (644)
|||||+||+.|+.++|++||++|+|+|.
T Consensus 3 ~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 3 NTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 7999999999999999999999999873
No 96
>KOG0818|consensus
Probab=98.49 E-value=4e-07 Score=94.52 Aligned_cols=84 Identities=29% Similarity=0.304 Sum_probs=70.4
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccCCC-CCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCC
Q psy2733 4 LHILAYQGCVEELNILLARGACVYYPDDA-GDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPS 82 (644)
Q Consensus 4 Lh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~-G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (644)
||..++.|+++..-.||..||++|..+.+ |.||||.|++.|+..=+++
T Consensus 137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~El------------------------------- 185 (669)
T KOG0818|consen 137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAEL------------------------------- 185 (669)
T ss_pred HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhH-------------------------------
Confidence 78888999999988899999998887754 8899999998887655544
Q ss_pred CCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 83 NLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+-+|+|++..|.+|.||+.+|-..||-++.+.|++
T Consensus 186 ------------------------------------------L~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 186 ------------------------------------------LAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred ------------------------------------------HhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 677888888889999999999999998888888776
No 97
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.49 E-value=1.9e-07 Score=62.47 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=28.5
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Q psy2733 241 KKRTPLMAAVGQGQTSVINYLMLRDVALDIQDI 273 (644)
Q Consensus 241 ~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~ 273 (644)
+|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 488999999999999999999999999888774
No 98
>KOG4265|consensus
Probab=98.48 E-value=3.7e-08 Score=99.39 Aligned_cols=50 Identities=40% Similarity=0.863 Sum_probs=42.7
Q ss_pred hhcCcccccccCCcCeEEe-cCc-ccchhhhhcC----CCCccccccccceEEEEE
Q psy2733 476 EEMNTCTICMERCRNTIFL-CGH-GTCDVCAKTL----KFCHMCRKLIEQRINISR 525 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~-CgH-~~C~~C~~~~----~~Cp~Cr~~i~~~~~~~~ 525 (644)
+....|+||++..++++.+ |+| +.|.+|++.+ .+||+||++|...+.++.
T Consensus 288 ~~gkeCVIClse~rdt~vLPCRHLCLCs~Ca~~Lr~q~n~CPICRqpi~~ll~i~~ 343 (349)
T KOG4265|consen 288 ESGKECVICLSESRDTVVLPCRHLCLCSGCAKSLRYQTNNCPICRQPIEELLEIYV 343 (349)
T ss_pred cCCCeeEEEecCCcceEEecchhhehhHhHHHHHHHhhcCCCccccchHhhheecc
Confidence 3346799999999999999 999 6699999965 369999999998776654
No 99
>KOG0506|consensus
Probab=98.45 E-value=2.3e-07 Score=95.95 Aligned_cols=96 Identities=27% Similarity=0.327 Sum_probs=85.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q psy2733 170 NSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAA 249 (644)
Q Consensus 170 d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~A 249 (644)
+.++..++++|+..|.+..++.+.-.+.++.. .|-+.+|+||.|+..|+++++++|++..+++++.+|.+|+|||.-|
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~--~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA 580 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLET--KDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDA 580 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccc--cccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHh
Confidence 45677889999999999999999888887765 6678899999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCC
Q psy2733 250 VGQGQTSVINYLMLRDVA 267 (644)
Q Consensus 250 a~~g~~~iv~~Ll~~gad 267 (644)
...+|.+++++|-+....
T Consensus 581 ~~F~h~~v~k~L~~~~~~ 598 (622)
T KOG0506|consen 581 KHFKHKEVVKLLEEAQYP 598 (622)
T ss_pred HhcCcHHHHHHHHHHhcc
Confidence 999999999999876543
No 100
>KOG0818|consensus
Probab=98.45 E-value=6.7e-07 Score=92.91 Aligned_cols=95 Identities=25% Similarity=0.272 Sum_probs=83.6
Q ss_pred ccCCCCCcH------HHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCC
Q psy2733 168 LENSKGFNI------LNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK 241 (644)
Q Consensus 168 ~~d~~g~tp------L~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~ 241 (644)
-+|.+|.+. ||..++.|+.+..-.||..|++.+.... ..|.||||.|++.|+..-+++|+-. |+|++..|.+
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hp-ekg~TpLHvAAk~Gq~~Q~ElL~vY-GAD~~a~d~~ 199 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHP-EKGNTPLHVAAKAGQILQAELLAVY-GADPGAQDSS 199 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCc-ccCCchhHHHHhccchhhhhHHhhc-cCCCCCCCCC
Confidence 445555544 8999999999999999999999887766 7899999999999999999999887 8999999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHC
Q psy2733 242 KRTPLMAAVGQGQTSVINYLMLR 264 (644)
Q Consensus 242 G~TpL~~Aa~~g~~~iv~~Ll~~ 264 (644)
|+||+.+|-..||-++.+.|++.
T Consensus 200 GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 200 GMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CCcHHHHHHhcCchHHHHHHHHH
Confidence 99999999999998888877754
No 101
>KOG0320|consensus
Probab=98.42 E-value=6.9e-08 Score=87.57 Aligned_cols=49 Identities=31% Similarity=0.800 Sum_probs=40.3
Q ss_pred CcccccccCCcCeE-E-e-cCcccchhhhhcC----CCCccccccccceEEEEEeee
Q psy2733 479 NTCTICMERCRNTI-F-L-CGHGTCDVCAKTL----KFCHMCRKLIEQRINISRAFV 528 (644)
Q Consensus 479 ~~C~iC~~~~~~~~-~-~-CgH~~C~~C~~~~----~~Cp~Cr~~i~~~~~~~~~~~ 528 (644)
..|+|||+.....+ + . |||+||..|++.. .+||+||+.|+.+. +|+.|+
T Consensus 132 ~~CPiCl~~~sek~~vsTkCGHvFC~~Cik~alk~~~~CP~C~kkIt~k~-~~rI~L 187 (187)
T KOG0320|consen 132 YKCPICLDSVSEKVPVSTKCGHVFCSQCIKDALKNTNKCPTCRKKITHKQ-FHRIYL 187 (187)
T ss_pred cCCCceecchhhccccccccchhHHHHHHHHHHHhCCCCCCcccccchhh-heeccC
Confidence 67999999988866 5 5 9999999999953 58999999998764 556554
No 102
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.40 E-value=3.7e-07 Score=61.00 Aligned_cols=31 Identities=32% Similarity=0.428 Sum_probs=29.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDD 31 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~ 31 (644)
+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 3 ~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 3 NTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp BBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 5999999999999999999999999998874
No 103
>PF13920 zf-C3HC4_3: Zinc finger, C3HC4 type (RING finger); PDB: 2YHN_B 2YHO_G 3T6P_A 2CSY_A 2VJE_B 2VJF_B 2HDP_B 2EA5_A 2ECG_A 3EB5_A ....
Probab=98.34 E-value=3.2e-07 Score=67.75 Aligned_cols=43 Identities=47% Similarity=0.994 Sum_probs=36.7
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh----hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~ 442 (644)
..|.||.+.. ..+.+.||||.+.|..|..++ ++||+||++|++
T Consensus 3 ~~C~iC~~~~-~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~ 49 (50)
T PF13920_consen 3 EECPICFENP-RDVVLLPCGHLCFCEECAERLLKRKKKCPICRQPIES 49 (50)
T ss_dssp SB-TTTSSSB-SSEEEETTCEEEEEHHHHHHHHHTTSBBTTTTBB-SE
T ss_pred CCCccCCccC-CceEEeCCCChHHHHHHhHHhcccCCCCCcCChhhcC
Confidence 3599999997 677888999999999999998 699999999976
No 104
>KOG1571|consensus
Probab=98.31 E-value=1.1e-07 Score=95.97 Aligned_cols=47 Identities=32% Similarity=0.880 Sum_probs=43.8
Q ss_pred CcccccccCCcCeEEe-cCc-ccchhhhhcCCCCccccccccceEEEEE
Q psy2733 479 NTCTICMERCRNTIFL-CGH-GTCDVCAKTLKFCHMCRKLIEQRINISR 525 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH-~~C~~C~~~~~~Cp~Cr~~i~~~~~~~~ 525 (644)
..|.||.+++.+.+|. ||| ++|..|++.+.+||+||+.|...+++|+
T Consensus 306 ~lcVVcl~e~~~~~fvpcGh~ccct~cs~~l~~CPvCR~rI~~~~k~y~ 354 (355)
T KOG1571|consen 306 DLCVVCLDEPKSAVFVPCGHVCCCTLCSKHLPQCPVCRQRIRLVRKRYR 354 (355)
T ss_pred CceEEecCCccceeeecCCcEEEchHHHhhCCCCchhHHHHHHHHHHhc
Confidence 6899999999999999 999 6699999999999999999999887775
No 105
>KOG0506|consensus
Probab=98.31 E-value=6.8e-07 Score=92.50 Aligned_cols=81 Identities=21% Similarity=0.242 Sum_probs=75.5
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCcHHHHHHH
Q psy2733 206 SDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLR-DVALDIQDIDGNGLLHFLFI 284 (644)
Q Consensus 206 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~-gadvn~~d~~G~T~Lh~A~~ 284 (644)
.++...+++|++.|....++.+.-. |.|++.+|.+.+|+||.||..|+++++++|++. +.+++.+|..|+|||.-|..
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~-g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~ 582 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQ-GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH 582 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHh-cccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence 5567889999999999999888776 899999999999999999999999999999976 89999999999999999998
Q ss_pred cCC
Q psy2733 285 KKN 287 (644)
Q Consensus 285 ~~~ 287 (644)
.++
T Consensus 583 F~h 585 (622)
T KOG0506|consen 583 FKH 585 (622)
T ss_pred cCc
Confidence 888
No 106
>PLN03208 E3 ubiquitin-protein ligase RMA2; Provisional
Probab=98.24 E-value=6.5e-07 Score=83.82 Aligned_cols=74 Identities=19% Similarity=0.390 Sum_probs=52.1
Q ss_pred hhhhcCcccccccCCcCeEEe-cCcccchhhhhc--------------------CCCCccccccccc--eEEEEEeeecC
Q psy2733 474 EIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT--------------------LKFCHMCRKLIEQ--RINISRAFVSP 530 (644)
Q Consensus 474 ~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~--------------------~~~Cp~Cr~~i~~--~~~~~~~~~~~ 530 (644)
+..++..|.||++...+.+.+ |||.+|..|... ..+||+||.+|+. .+.+|-..-+.
T Consensus 14 ~~~~~~~CpICld~~~dPVvT~CGH~FC~~CI~~wl~~s~~s~~~~~~~~~~k~~~~CPvCR~~Is~~~LvPiygrg~~~ 93 (193)
T PLN03208 14 DSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEATLVPIYGRGQKA 93 (193)
T ss_pred cCCCccCCccCCCcCCCcEEcCCCchhHHHHHHHHHHhccccccccccccccCCCCcCCCCCCcCChhcEEEeeccCCCC
Confidence 344568899999999999999 999999999963 1379999999977 45555444444
Q ss_pred CCCCCCCCCccceEEEE
Q psy2733 531 DQNGNTTSNTMFHIRIQ 547 (644)
Q Consensus 531 ~~~~~~~~~~~~~~~~~ 547 (644)
.+-+.+.+.---+.+.+
T Consensus 94 ~~~~~~iP~rp~~~~~~ 110 (193)
T PLN03208 94 PQSGSNVPSRPSGPVYD 110 (193)
T ss_pred CCCCCCCCcCCCCCccC
Confidence 44444444433344433
No 107
>KOG0782|consensus
Probab=98.21 E-value=3.7e-06 Score=88.53 Aligned_cols=100 Identities=24% Similarity=0.306 Sum_probs=67.4
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCC
Q psy2733 163 EVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKK 242 (644)
Q Consensus 163 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G 242 (644)
|.++-.++.+..+.||+|+..|+-++|+++|++++.......|..|.|+||.|+..++..+.++|++. |+.+...|..|
T Consensus 889 gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvda-gasl~ktd~kg 967 (1004)
T KOG0782|consen 889 GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDA-GASLRKTDSKG 967 (1004)
T ss_pred CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhc-chhheecccCC
Confidence 44555666666777777777777777777777766544333446677777777777777777777766 66666677777
Q ss_pred CCHHHHHHHcCCHHHHHHHHH
Q psy2733 243 RTPLMAAVGQGQTSVINYLML 263 (644)
Q Consensus 243 ~TpL~~Aa~~g~~~iv~~Ll~ 263 (644)
.||-..|-+.|..++.-+|-.
T Consensus 968 ~tp~eraqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 968 KTPQERAQQAGDPDLAAYLES 988 (1004)
T ss_pred CChHHHHHhcCCchHHHHHhh
Confidence 777777777777777666653
No 108
>KOG0522|consensus
Probab=98.20 E-value=3.1e-06 Score=89.29 Aligned_cols=87 Identities=22% Similarity=0.335 Sum_probs=46.4
Q ss_pred HHHHHHHcCCHHHHHH-HhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCc
Q psy2733 142 PMHDAVAKGFEEIQLL-LLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDH 220 (644)
Q Consensus 142 pL~~A~~~g~~~iv~~-Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~ 220 (644)
|+|+++.....+-+.. |.......++.+|..|.||||+|+..|+.+.++.|+..+++... ++..||+|||.|+..|+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~--kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI--KNNEGWSPLHEAVSTGN 100 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc--cccccccHHHHHHHcCC
Confidence 3566655554333322 22223444555555566666666666666666666655555433 44556666666666666
Q ss_pred HHHHHHHHHh
Q psy2733 221 IEIVELLVEK 230 (644)
Q Consensus 221 ~~~v~~Ll~~ 230 (644)
.+++..++.+
T Consensus 101 ~q~i~~vlr~ 110 (560)
T KOG0522|consen 101 EQIITEVLRH 110 (560)
T ss_pred HHHHHHHHHH
Confidence 5555555544
No 109
>KOG0782|consensus
Probab=98.18 E-value=4.4e-06 Score=88.02 Aligned_cols=109 Identities=19% Similarity=0.152 Sum_probs=88.4
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCC-cccCCCCCCCHHHHHHHcCCH
Q psy2733 177 LNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVN-INALDLKKRTPLMAAVGQGQT 255 (644)
Q Consensus 177 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~-in~~d~~G~TpL~~Aa~~g~~ 255 (644)
+..|+..+.+--++.....|..... ++.+..+.||+|+..|+-++|+++|++...+ +++.|..|.|+||.|+..++.
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~--~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r 947 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLI--QGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNR 947 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEe--eCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcch
Confidence 3445555554444444444544433 5577899999999999999999999985433 477889999999999999999
Q ss_pred HHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 256 SVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 256 ~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
.+.++|++.|+.+...|..|.||-..|-..++
T Consensus 948 ~vc~~lvdagasl~ktd~kg~tp~eraqqa~d 979 (1004)
T KOG0782|consen 948 AVCQLLVDAGASLRKTDSKGKTPQERAQQAGD 979 (1004)
T ss_pred HHHHHHHhcchhheecccCCCChHHHHHhcCC
Confidence 99999999999999999999999999998888
No 110
>KOG0705|consensus
Probab=98.18 E-value=4.5e-06 Score=88.46 Aligned_cols=91 Identities=25% Similarity=0.263 Sum_probs=72.9
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCcc--CCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCC
Q psy2733 177 LNYAVLRGNMKVTEKILALNRNLA--TVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQ 254 (644)
Q Consensus 177 L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~ 254 (644)
|..|+...++..+-+||.+|.... ....+.+|.|+||+|++.|++.+.++|+=+ |+|+-.+|..|+|+|.||-+.|.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWy-g~dv~~rda~g~t~l~yar~a~s 706 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWY-GVDVMARDAHGRTALFYARQAGS 706 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHh-CccceecccCCchhhhhHhhccc
Confidence 556777777778888888876532 223346788999999999999988888866 88999999999999999999999
Q ss_pred HHHHHHHHHCCCCC
Q psy2733 255 TSVINYLMLRDVAL 268 (644)
Q Consensus 255 ~~iv~~Ll~~gadv 268 (644)
.+++..|+.+|+.-
T Consensus 707 qec~d~llq~gcp~ 720 (749)
T KOG0705|consen 707 QECIDVLLQYGCPD 720 (749)
T ss_pred HHHHHHHHHcCCCc
Confidence 99999999888763
No 111
>KOG4172|consensus
Probab=98.16 E-value=1.5e-07 Score=67.33 Aligned_cols=46 Identities=35% Similarity=0.767 Sum_probs=41.0
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh-----hhhccccceeeeee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEMRVT 445 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~~~~ 445 (644)
.||.||.+.++..|++ -|||++.|.+|.-+++ .||+||++|...|+
T Consensus 8 dECTICye~pvdsVlY-tCGHMCmCy~Cg~rl~~~~~g~CPiCRapi~dvIk 58 (62)
T KOG4172|consen 8 DECTICYEHPVDSVLY-TCGHMCMCYACGLRLKKALHGCCPICRAPIKDVIK 58 (62)
T ss_pred cceeeeccCcchHHHH-HcchHHhHHHHHHHHHHccCCcCcchhhHHHHHHH
Confidence 6899999999888777 9999999999998887 59999999987664
No 112
>KOG0705|consensus
Probab=98.15 E-value=5.4e-06 Score=87.87 Aligned_cols=90 Identities=21% Similarity=0.219 Sum_probs=75.8
Q ss_pred HHHHHhcCcHHHHHHHHHhcC---CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCc
Q psy2733 212 LHVACFNDHIEIVELLVEKYK---VNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNF 288 (644)
Q Consensus 212 Lh~A~~~g~~~~v~~Ll~~~g---~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~ 288 (644)
|..|+...+...+-+||.++. .+-...+.+|+|+||+|++.|++.+.++|+=+|+|+.++|.+|+|+|.||-..+.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s- 706 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS- 706 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc-
Confidence 566777777888888887621 2223455778999999999999999999999999999999999999999999888
Q ss_pred ccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCC
Q psy2733 289 YKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPL 332 (644)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi 332 (644)
-+++..|+.+|...
T Consensus 707 ------------------------------qec~d~llq~gcp~ 720 (749)
T KOG0705|consen 707 ------------------------------QECIDVLLQYGCPD 720 (749)
T ss_pred ------------------------------HHHHHHHHHcCCCc
Confidence 67999999999653
No 113
>KOG0522|consensus
Probab=98.13 E-value=6.1e-06 Score=87.18 Aligned_cols=78 Identities=28% Similarity=0.328 Sum_probs=46.5
Q ss_pred HHHHHHhcCcHHHHHH-HHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCc
Q psy2733 211 PLHVACFNDHIEIVEL-LVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNF 288 (644)
Q Consensus 211 ~Lh~A~~~g~~~~v~~-Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~ 288 (644)
|||+++.....+-+.. |.......++.+|..|.||||+|+..|+...++.|+..|+++..+|++|+++||-|+..|+.
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 4666655554443333 22222345666666666666666666666666666666666666666666666666666663
No 114
>KOG4265|consensus
Probab=98.08 E-value=1.2e-06 Score=88.68 Aligned_cols=48 Identities=25% Similarity=0.724 Sum_probs=41.0
Q ss_pred ccccccccccccceEEecCCCccccchhhHHHhh----hhhccccceeeeeec
Q psy2733 398 PVECAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMCKTFIEMRVTT 446 (644)
Q Consensus 398 ~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~~~~~ 446 (644)
..+|+||+... ++.+..||+|++.|++|+..++ +||+||++|++-..+
T Consensus 290 gkeCVIClse~-rdt~vLPCRHLCLCs~Ca~~Lr~q~n~CPICRqpi~~ll~i 341 (349)
T KOG4265|consen 290 GKECVICLSES-RDTVVLPCRHLCLCSGCAKSLRYQTNNCPICRQPIEELLEI 341 (349)
T ss_pred CCeeEEEecCC-cceEEecchhhehhHhHHHHHHHhhcCCCccccchHhhhee
Confidence 46899999998 5556669999999999999987 699999999885543
No 115
>KOG3609|consensus
Probab=98.00 E-value=1.8e-05 Score=88.42 Aligned_cols=124 Identities=19% Similarity=0.175 Sum_probs=95.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCC---CCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHH
Q psy2733 138 NQDTPMHDAVAKGFEEIQLLLLSHPE---VNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHV 214 (644)
Q Consensus 138 ~G~TpL~~A~~~g~~~iv~~Ll~~~~---~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~ 214 (644)
.+.--...|+.+|+...|+..++... .++|-.|.-|.++|+.|+.+.+.+++++|++..-.. ..+|.+
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~---------gdALL~ 94 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE---------GDALLL 94 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc---------chHHHH
Confidence 34445677889999888888777432 456777888999999999999999999998865332 467888
Q ss_pred HHhcCcHHHHHHHHHhcCCC---------cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc
Q psy2733 215 ACFNDHIEIVELLVEKYKVN---------INALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDI 270 (644)
Q Consensus 215 A~~~g~~~~v~~Ll~~~g~~---------in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~ 270 (644)
|+..|.+++|+.++.+.... -...-..+.|||++||..++.+|+++|+++|+.+..
T Consensus 95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 99999999999998863111 012234578999999999999999999999998755
No 116
>PF13923 zf-C3HC4_2: Zinc finger, C3HC4 type (RING finger); PDB: 3HCU_A 2ECI_A 2JMD_A 3HCS_B 3HCT_A 3ZTG_A 2YUR_A 3L11_A.
Probab=97.99 E-value=3.3e-06 Score=58.71 Aligned_cols=33 Identities=33% Similarity=1.023 Sum_probs=27.0
Q ss_pred ccccccCCcCe-EEe-cCcccchhhhhc----CCCCccc
Q psy2733 481 CTICMERCRNT-IFL-CGHGTCDVCAKT----LKFCHMC 513 (644)
Q Consensus 481 C~iC~~~~~~~-~~~-CgH~~C~~C~~~----~~~Cp~C 513 (644)
|+||++...+. ++. |||.+|.+|+.+ ..+||+|
T Consensus 1 C~iC~~~~~~~~~~~~CGH~fC~~C~~~~~~~~~~CP~C 39 (39)
T PF13923_consen 1 CPICLDELRDPVVVTPCGHSFCKECIEKYLEKNPKCPVC 39 (39)
T ss_dssp ETTTTSB-SSEEEECTTSEEEEHHHHHHHHHCTSB-TTT
T ss_pred CCCCCCcccCcCEECCCCCchhHHHHHHHHHCcCCCcCC
Confidence 89999999999 567 999999999984 3689987
No 117
>KOG0978|consensus
Probab=97.96 E-value=2.1e-06 Score=95.04 Aligned_cols=55 Identities=24% Similarity=0.672 Sum_probs=47.8
Q ss_pred HHHHHHhhhhhhhcCcccccccCCcCeEEe-cCcccchhhhh-----cCCCCccccccccc
Q psy2733 465 VNYLESKISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAK-----TLKFCHMCRKLIEQ 519 (644)
Q Consensus 465 ~~~l~~~~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~-----~~~~Cp~Cr~~i~~ 519 (644)
...|.+++...+.-..|++|.++++++|+. |||+||..|.. +.++||.|..++..
T Consensus 630 d~~L~EElk~yK~~LkCs~Cn~R~Kd~vI~kC~H~FC~~Cvq~r~etRqRKCP~Cn~aFga 690 (698)
T KOG0978|consen 630 DEVLAEELKEYKELLKCSVCNTRWKDAVITKCGHVFCEECVQTRYETRQRKCPKCNAAFGA 690 (698)
T ss_pred cHHHHHHHHHHHhceeCCCccCchhhHHHHhcchHHHHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 355667777777778999999999999999 99999999998 45899999998775
No 118
>KOG2164|consensus
Probab=97.95 E-value=5.3e-06 Score=87.58 Aligned_cols=43 Identities=30% Similarity=0.631 Sum_probs=38.3
Q ss_pred cCcccccccCCcCeEEe-cCcccchhhhhc---------CCCCccccccccce
Q psy2733 478 MNTCTICMERCRNTIFL-CGHGTCDVCAKT---------LKFCHMCRKLIEQR 520 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~---------~~~Cp~Cr~~i~~~ 520 (644)
...|+||++.+.-.+.+ |||.||..|.-. ...||+||..|..+
T Consensus 186 ~~~CPICL~~~~~p~~t~CGHiFC~~CiLqy~~~s~~~~~~~CPiC~s~I~~k 238 (513)
T KOG2164|consen 186 DMQCPICLEPPSVPVRTNCGHIFCGPCILQYWNYSAIKGPCSCPICRSTITLK 238 (513)
T ss_pred CCcCCcccCCCCcccccccCceeeHHHHHHHHhhhcccCCccCCchhhhcccc
Confidence 56899999999999999 999999999772 35899999999974
No 119
>KOG1100|consensus
Probab=97.95 E-value=4.8e-06 Score=80.45 Aligned_cols=118 Identities=19% Similarity=0.384 Sum_probs=73.6
Q ss_pred cccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeecCCCccCCCcccchhHHHHHHHHHHhhhhhhhcCc
Q psy2733 401 CAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISEIEEMNT 480 (644)
Q Consensus 401 C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 480 (644)
+.++.+.. .-.-..++++..+++.+......|+.|. .+.... -.+....+......... ..-..+...+.....
T Consensus 87 ~~~~~e~~-~w~~~a~~ne~~~~~l~~nl~q~~~~~~-~~~~~~-~~~~~~~g~~~~~~~~s---~~~~~~~~~~~~~~~ 160 (207)
T KOG1100|consen 87 KSLYVEAQ-IWRDRAQTNEATVNSLRTNLDQVLAQCP-ASAPAE-ERGQKSCGDREADDGKS---SYVDPSVDNFKRMRS 160 (207)
T ss_pred hhhhhhHH-HHHHHHHhChHHHHHHHHHHHHHHHhcc-cccCch-hhhccccCccccccccc---cccchhhhhhhcccc
Confidence 55555543 2223337888889999999999999981 111111 11111222211111000 111112223233344
Q ss_pred ccccccCCcCeEEe-cCc-ccchhhhhcCCCCccccccccceEEEE
Q psy2733 481 CTICMERCRNTIFL-CGH-GTCDVCAKTLKFCHMCRKLIEQRINIS 524 (644)
Q Consensus 481 C~iC~~~~~~~~~~-CgH-~~C~~C~~~~~~Cp~Cr~~i~~~~~~~ 524 (644)
|..|.++...++++ |.| +.|..|....+.||+|+.++...+.+|
T Consensus 161 Cr~C~~~~~~VlllPCrHl~lC~~C~~~~~~CPiC~~~~~s~~~v~ 206 (207)
T KOG1100|consen 161 CRKCGEREATVLLLPCRHLCLCGICDESLRICPICRSPKTSSVEVN 206 (207)
T ss_pred ceecCcCCceEEeecccceEecccccccCccCCCCcChhhceeecc
Confidence 99999999999999 999 779999999999999999999988665
No 120
>PF14634 zf-RING_5: zinc-RING finger domain
Probab=97.95 E-value=4.4e-06 Score=59.75 Aligned_cols=36 Identities=47% Similarity=1.089 Sum_probs=30.2
Q ss_pred cccccccCC---cCeEEe-cCcccchhhhhcCC----CCccccc
Q psy2733 480 TCTICMERC---RNTIFL-CGHGTCDVCAKTLK----FCHMCRK 515 (644)
Q Consensus 480 ~C~iC~~~~---~~~~~~-CgH~~C~~C~~~~~----~Cp~Cr~ 515 (644)
.|.||++.. ....++ |||.+|..|+..+. .||+||+
T Consensus 1 ~C~~C~~~~~~~~~~~l~~CgH~~C~~C~~~~~~~~~~CP~C~k 44 (44)
T PF14634_consen 1 HCNICFEKYSEERRPRLTSCGHIFCEKCLKKLKGKSVKCPICRK 44 (44)
T ss_pred CCcCcCccccCCCCeEEcccCCHHHHHHHHhhcCCCCCCcCCCC
Confidence 388999887 345666 99999999999876 9999985
No 121
>KOG0521|consensus
Probab=97.95 E-value=1.4e-05 Score=91.79 Aligned_cols=79 Identities=23% Similarity=0.337 Sum_probs=71.6
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHH
Q psy2733 240 LKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILL 319 (644)
Q Consensus 240 ~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (644)
..|.|+||.|+..|...++++|++.|+++|.+|..|+||||.+...|+ .
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~-------------------------------~ 702 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGH-------------------------------T 702 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcc-------------------------------c
Confidence 467899999999999999999999999999999999999999999888 4
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcchhhhcC
Q psy2733 320 AVFLFLVKHGAPLSLENNNRQKPLDLILED 349 (644)
Q Consensus 320 ~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~ 349 (644)
..+..|+++||+.++.+.+|++|+++|.+.
T Consensus 703 ~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 703 SIACLLLKRGADPNAFDPDGKLPLDIAMEA 732 (785)
T ss_pred chhhhhccccccccccCccCcchhhHHhhh
Confidence 588889999999999999999999999744
No 122
>PHA02929 N1R/p28-like protein; Provisional
Probab=97.93 E-value=6.2e-06 Score=80.85 Aligned_cols=46 Identities=30% Similarity=0.669 Sum_probs=36.5
Q ss_pred hhcCcccccccCCcC--------eEEe-cCcccchhhhhc----CCCCccccccccceE
Q psy2733 476 EEMNTCTICMERCRN--------TIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQRI 521 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~--------~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~~ 521 (644)
.++..|+||++...+ .++. |||.||..|... -..||+||.++...+
T Consensus 172 ~~~~eC~ICle~~~~~~~~~~~~~vl~~C~H~FC~~CI~~Wl~~~~tCPlCR~~~~~v~ 230 (238)
T PHA02929 172 SKDKECAICMEKVYDKEIKNMYFGILSNCNHVFCIECIDIWKKEKNTCPVCRTPFISVI 230 (238)
T ss_pred CCCCCCccCCcccccCccccccceecCCCCCcccHHHHHHHHhcCCCCCCCCCEeeEEe
Confidence 345689999997543 3566 999999999973 358999999999765
No 123
>KOG3609|consensus
Probab=97.93 E-value=3.8e-05 Score=85.83 Aligned_cols=123 Identities=20% Similarity=0.236 Sum_probs=100.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCC--ccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHH
Q psy2733 173 GFNILNYAVLRGNMKVTEKILALNRN--LATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAV 250 (644)
Q Consensus 173 g~tpL~~A~~~g~~~~v~~Ll~~~~~--~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa 250 (644)
+.--...|+++|+...|+..++.... .+....|.-|.++|+.|+.+.+.+++++|++. +.++ ..+|.+|+
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~-~~~~-------gdALL~aI 96 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDT-SSEE-------GDALLLAI 96 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcC-cccc-------chHHHHHH
Confidence 44557789999999999999987665 55555678899999999999999999999987 3333 35899999
Q ss_pred HcCCHHHHHHHHHCCCCCC----------cccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHH
Q psy2733 251 GQGQTSVINYLMLRDVALD----------IQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLA 320 (644)
Q Consensus 251 ~~g~~~iv~~Ll~~gadvn----------~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (644)
..|.+++|++++.+..... ..-.-+-|||.+|+..++ +|
T Consensus 97 ~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~Nn-------------------------------yE 145 (822)
T KOG3609|consen 97 AVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNN-------------------------------FE 145 (822)
T ss_pred HHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcc-------------------------------hH
Confidence 9999999999998754431 223457899999999998 77
Q ss_pred HHHHHHHcCCCCCC
Q psy2733 321 VFLFLVKHGAPLSL 334 (644)
Q Consensus 321 iv~~Ll~~Gadi~~ 334 (644)
|+++|+++|+.+..
T Consensus 146 il~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 146 ILQCLLTRGHCIPI 159 (822)
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999998754
No 124
>PHA02926 zinc finger-like protein; Provisional
Probab=97.85 E-value=4.6e-06 Score=78.78 Aligned_cols=46 Identities=24% Similarity=0.543 Sum_probs=34.8
Q ss_pred hhcCcccccccCCc---------CeEEe-cCcccchhhhhcC----------CCCccccccccceE
Q psy2733 476 EEMNTCTICMERCR---------NTIFL-CGHGTCDVCAKTL----------KFCHMCRKLIEQRI 521 (644)
Q Consensus 476 ~~~~~C~iC~~~~~---------~~~~~-CgH~~C~~C~~~~----------~~Cp~Cr~~i~~~~ 521 (644)
.++.+|.||||... -.++. |+|.||..|.... +.||+||......+
T Consensus 168 SkE~eCgICmE~I~eK~~~~eRrFGIL~~CnHsFCl~CIr~Wr~~r~~~~~~rsCPiCR~~f~~I~ 233 (242)
T PHA02926 168 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRRETGASDNCPICRTRFRNIT 233 (242)
T ss_pred cCCCCCccCccccccccccccccccccCCCCchHHHHHHHHHHHhccccCcCCcCCCCcceeeeec
Confidence 44468999998742 24566 9999999999843 24999999988443
No 125
>KOG0521|consensus
Probab=97.84 E-value=2.3e-05 Score=89.97 Aligned_cols=82 Identities=35% Similarity=0.399 Sum_probs=77.7
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHc
Q psy2733 206 SDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIK 285 (644)
Q Consensus 206 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~ 285 (644)
..|.|+||.|+..+..-++++|+.. |+++|..|..|+||||.+...|+...+..|+++|++.++.+.+|.++|++|...
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~-ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQN-GADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA 732 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhc-CCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence 5688999999999999999999998 899999999999999999999999999999999999999999999999999877
Q ss_pred CCc
Q psy2733 286 KNF 288 (644)
Q Consensus 286 ~~~ 288 (644)
.+.
T Consensus 733 ~~~ 735 (785)
T KOG0521|consen 733 ANA 735 (785)
T ss_pred ccc
Confidence 553
No 126
>KOG4275|consensus
Probab=97.82 E-value=2.4e-06 Score=83.22 Aligned_cols=47 Identities=30% Similarity=0.764 Sum_probs=40.6
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeec
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTT 446 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~ 446 (644)
.-|.||+|.+... +|.+|||+++|.+|..+|..||+||+.|.+.+.+
T Consensus 301 ~LC~ICmDaP~DC-vfLeCGHmVtCt~CGkrm~eCPICRqyi~rvvri 347 (350)
T KOG4275|consen 301 RLCAICMDAPRDC-VFLECGHMVTCTKCGKRMNECPICRQYIVRVVRI 347 (350)
T ss_pred HHHHHHhcCCcce-EEeecCcEEeehhhccccccCchHHHHHHHHHhh
Confidence 4599999999555 5559999999999999999999999999876643
No 127
>KOG2384|consensus
Probab=97.77 E-value=7.4e-05 Score=69.08 Aligned_cols=55 Identities=25% Similarity=0.237 Sum_probs=41.9
Q ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCcccCCCCcHHHHHHHcCC
Q psy2733 233 VNINALDLKKRTPLMAAVGQGQTSVINYLMLRD-VALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 233 ~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~g-advn~~d~~G~T~Lh~A~~~~~ 287 (644)
.++|.+|..|+||||.|+..|+.+.+.+|+.+| +.+...|..|.+++.+|-+.|.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~ 58 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGA 58 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcCh
Confidence 567777777777777777777777777777777 7777777777777777777666
No 128
>KOG0823|consensus
Probab=97.76 E-value=1.6e-05 Score=75.82 Aligned_cols=52 Identities=21% Similarity=0.520 Sum_probs=42.9
Q ss_pred hcCcccccccCCcCeEEe-cCcccchhhhhc-------CCCCccccccccc--eEEEEEeee
Q psy2733 477 EMNTCTICMERCRNTIFL-CGHGTCDVCAKT-------LKFCHMCRKLIEQ--RINISRAFV 528 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~-------~~~Cp~Cr~~i~~--~~~~~~~~~ 528 (644)
....|-||+|...+.|.+ |||-+|-.|.-. .+.||+|+..|+. .|.||---.
T Consensus 46 ~~FdCNICLd~akdPVvTlCGHLFCWpClyqWl~~~~~~~~cPVCK~~Vs~~~vvPlYGrG~ 107 (230)
T KOG0823|consen 46 GFFDCNICLDLAKDPVVTLCGHLFCWPCLYQWLQTRPNSKECPVCKAEVSIDTVVPLYGRGS 107 (230)
T ss_pred CceeeeeeccccCCCEEeecccceehHHHHHHHhhcCCCeeCCccccccccceEEeeeccCC
Confidence 347899999999999999 999999999873 3579999988776 576765444
No 129
>KOG2384|consensus
Probab=97.74 E-value=9.6e-05 Score=68.33 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=63.3
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCc
Q psy2733 129 GCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPE-VNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNL 199 (644)
Q Consensus 129 gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~-~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 199 (644)
+.++|.+|..|||++|.|+..|+.+.+.+|+. .| +.+...|..|.+++.+|-+.|..++++.|.+...+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllg-rg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLG-RGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhc-cCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 56889999999999999999999999999999 56 899999999999999999999999999999875543
No 130
>PF14835 zf-RING_6: zf-RING of BARD1-type protein; PDB: 1JM7_B.
Probab=97.72 E-value=1.6e-05 Score=60.03 Aligned_cols=46 Identities=26% Similarity=0.689 Sum_probs=26.6
Q ss_pred hhhhhcCcccccccCCcCeEEe--cCcccchhhhhcC--CCCcccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKTL--KFCHMCRKLIE 518 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~--~~Cp~Cr~~i~ 518 (644)
+++++...|.+|.+-.+..|.+ |.|.||..|+... ..||+|+.|-.
T Consensus 2 ~~le~lLrCs~C~~~l~~pv~l~~CeH~fCs~Ci~~~~~~~CPvC~~Paw 51 (65)
T PF14835_consen 2 ERLEELLRCSICFDILKEPVCLGGCEHIFCSSCIRDCIGSECPVCHTPAW 51 (65)
T ss_dssp HHHHHTTS-SSS-S--SS-B---SSS--B-TTTGGGGTTTB-SSS--B-S
T ss_pred hHHHHhcCCcHHHHHhcCCceeccCccHHHHHHhHHhcCCCCCCcCChHH
Confidence 4566677899999999999875 9999999999964 68999998864
No 131
>PF15227 zf-C3HC4_4: zinc finger of C3HC4-type, RING; PDB: 2EGP_A 2ECV_A 2ECJ_A 2YSL_A 2YSJ_A.
Probab=97.71 E-value=2.1e-05 Score=55.49 Aligned_cols=33 Identities=36% Similarity=1.014 Sum_probs=25.6
Q ss_pred ccccccCCcCeEEe-cCcccchhhhhcC--------CCCccc
Q psy2733 481 CTICMERCRNTIFL-CGHGTCDVCAKTL--------KFCHMC 513 (644)
Q Consensus 481 C~iC~~~~~~~~~~-CgH~~C~~C~~~~--------~~Cp~C 513 (644)
|+||++-..+.+.+ |||.+|..|..+. ..||.|
T Consensus 1 CpiC~~~~~~Pv~l~CGH~FC~~Cl~~~~~~~~~~~~~CP~C 42 (42)
T PF15227_consen 1 CPICLDLFKDPVSLPCGHSFCRSCLERLWKEPSGSGFSCPEC 42 (42)
T ss_dssp ETTTTSB-SSEEE-SSSSEEEHHHHHHHHCCSSSST---SSS
T ss_pred CCccchhhCCccccCCcCHHHHHHHHHHHHccCCcCCCCcCC
Confidence 89999999999999 9999999999843 258887
No 132
>KOG0511|consensus
Probab=97.71 E-value=0.00014 Score=73.85 Aligned_cols=75 Identities=29% Similarity=0.424 Sum_probs=55.5
Q ss_pred chHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHc
Q psy2733 209 FTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIK 285 (644)
Q Consensus 209 ~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~ 285 (644)
+.-|-.|++.|..+.|+.|++. |+++|.+|....+||.+|+..||..+|++|+++||--..-..+|.-. ||++.+
T Consensus 37 f~elceacR~GD~d~v~~LVet-gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVET-GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALN 111 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHh-CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhh
Confidence 4557788888888888888885 78888888888888888888888888888888887665444555544 444443
No 133
>KOG1571|consensus
Probab=97.63 E-value=1.3e-05 Score=81.25 Aligned_cols=48 Identities=27% Similarity=0.718 Sum_probs=42.6
Q ss_pred cccccccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeee
Q psy2733 397 VPVECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVT 445 (644)
Q Consensus 397 ~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~ 445 (644)
.+.-|+||.+.+ .+..+.||||+++|..|.+.+.+||+||..|...++
T Consensus 304 ~p~lcVVcl~e~-~~~~fvpcGh~ccct~cs~~l~~CPvCR~rI~~~~k 351 (355)
T KOG1571|consen 304 QPDLCVVCLDEP-KSAVFVPCGHVCCCTLCSKHLPQCPVCRQRIRLVRK 351 (355)
T ss_pred CCCceEEecCCc-cceeeecCCcEEEchHHHhhCCCCchhHHHHHHHHH
Confidence 346799999999 668999999999999999999999999999876553
No 134
>PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A ....
Probab=97.60 E-value=2.5e-05 Score=55.92 Aligned_cols=35 Identities=37% Similarity=0.866 Sum_probs=28.0
Q ss_pred cccccccCCc---CeEEe-cCcccchhhhhc----CCCCcccc
Q psy2733 480 TCTICMERCR---NTIFL-CGHGTCDVCAKT----LKFCHMCR 514 (644)
Q Consensus 480 ~C~iC~~~~~---~~~~~-CgH~~C~~C~~~----~~~Cp~Cr 514 (644)
.|.||++... .++.+ |||.+|..|... -..||+||
T Consensus 2 ~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~~~~~~~~CP~CR 44 (44)
T PF13639_consen 2 ECPICLEEFEDGEKVVKLPCGHVFHRSCIKEWLKRNNSCPVCR 44 (44)
T ss_dssp CETTTTCBHHTTSCEEEETTSEEEEHHHHHHHHHHSSB-TTTH
T ss_pred CCcCCChhhcCCCeEEEccCCCeeCHHHHHHHHHhCCcCCccC
Confidence 5999998873 46666 999999999884 36999998
No 135
>KOG0317|consensus
Probab=97.55 E-value=3.3e-05 Score=76.01 Aligned_cols=42 Identities=29% Similarity=0.684 Sum_probs=37.6
Q ss_pred CcccccccCCcCeEEe-cCcccchhhhhc----CCCCccccccccce
Q psy2733 479 NTCTICMERCRNTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQR 520 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~ 520 (644)
..|.+|++...+...+ |||.||-.|+.. -..||+||.+.+..
T Consensus 240 ~kC~LCLe~~~~pSaTpCGHiFCWsCI~~w~~ek~eCPlCR~~~~ps 286 (293)
T KOG0317|consen 240 RKCSLCLENRSNPSATPCGHIFCWSCILEWCSEKAECPLCREKFQPS 286 (293)
T ss_pred CceEEEecCCCCCCcCcCcchHHHHHHHHHHccccCCCcccccCCCc
Confidence 7899999999999999 999999999884 35799999988764
No 136
>KOG0520|consensus
Probab=97.54 E-value=6e-05 Score=86.07 Aligned_cols=130 Identities=17% Similarity=0.067 Sum_probs=102.0
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHHh-cCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCC
Q psy2733 165 NLYLENSKGFNILNYAVLRGNMKVTEKILAL-NRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKR 243 (644)
Q Consensus 165 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~ 243 (644)
........|++.+|+++..++..+++.+++. +..... -|.+|...+|+ |..++++..-+|+.-.|..++.+|..|+
T Consensus 566 ~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~e--ld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~ 642 (975)
T KOG0520|consen 566 LSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLE--LDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGW 642 (975)
T ss_pred ccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchh--hcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCC
Confidence 4445566789999999999999999999986 333333 44677777888 5556667766666666899999999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCc------ccCCCCcHHHHHHHcCCcccccccccC
Q psy2733 244 TPLMAAVGQGQTSVINYLMLRDVALDI------QDIDGNGLLHFLFIKKNFYKTPITREK 297 (644)
Q Consensus 244 TpL~~Aa~~g~~~iv~~Ll~~gadvn~------~d~~G~T~Lh~A~~~~~~~~~~~~~~~ 297 (644)
||||+|+.+|+..++..|++.|++... .+-.|.|+--.|..+|+..+...+.+.
T Consensus 643 tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 643 TPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred cccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 999999999999999999988877543 345699999999988887766555555
No 137
>KOG0511|consensus
Probab=97.51 E-value=0.00024 Score=72.16 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=65.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcC
Q psy2733 174 FNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQG 253 (644)
Q Consensus 174 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g 253 (644)
+--|..|++.|..+.|+.|++.|.+++. .|...+.||.+|+..||.++|++|+++ |+--..-...|.-. ||++.+
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~--vD~fD~spL~lAsLcGHe~vvklLLen-GAiC~rdtf~G~RC-~YgaLn- 111 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNA--VDRFDSSPLYLASLCGHEDVVKLLLEN-GAICSRDTFDGDRC-HYGALN- 111 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcch--hhcccccHHHHHHHcCcHHHHHHHHHc-CCcccccccCcchh-hhhhhh-
Confidence 4568999999999999999998877766 667889999999999999999999998 66555555566555 444443
Q ss_pred CHHHHHHHHHC
Q psy2733 254 QTSVINYLMLR 264 (644)
Q Consensus 254 ~~~iv~~Ll~~ 264 (644)
..+-++|+..
T Consensus 112 -d~IR~mllsy 121 (516)
T KOG0511|consen 112 -DRIRRMLLSY 121 (516)
T ss_pred -HHHHHHHHHH
Confidence 4455566643
No 138
>TIGR00599 rad18 DNA repair protein rad18. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.49 E-value=4.5e-05 Score=80.41 Aligned_cols=49 Identities=20% Similarity=0.603 Sum_probs=42.2
Q ss_pred hhhhhhhcCcccccccCCcCeEEe-cCcccchhhhhc----CCCCccccccccc
Q psy2733 471 KISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQ 519 (644)
Q Consensus 471 ~~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~ 519 (644)
.+..++....|.||++...+.+.+ |||.||..|... ...||+||.++..
T Consensus 19 ~l~~Le~~l~C~IC~d~~~~PvitpCgH~FCs~CI~~~l~~~~~CP~Cr~~~~~ 72 (397)
T TIGR00599 19 SLYPLDTSLRCHICKDFFDVPVLTSCSHTFCSLCIRRCLSNQPKCPLCRAEDQE 72 (397)
T ss_pred cccccccccCCCcCchhhhCccCCCCCCchhHHHHHHHHhCCCCCCCCCCcccc
Confidence 356677788999999999999999 999999999983 3479999998865
No 139
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)
Probab=97.41 E-value=0.00011 Score=52.33 Aligned_cols=38 Identities=39% Similarity=0.996 Sum_probs=30.4
Q ss_pred cccccccCCc-CeEEe-cCcccchhhhhc-----CCCCccccccc
Q psy2733 480 TCTICMERCR-NTIFL-CGHGTCDVCAKT-----LKFCHMCRKLI 517 (644)
Q Consensus 480 ~C~iC~~~~~-~~~~~-CgH~~C~~C~~~-----~~~Cp~Cr~~i 517 (644)
.|.||++... .+.+. |||.+|..|... ...||+||..+
T Consensus 1 ~C~iC~~~~~~~~~~~~C~H~~c~~C~~~~~~~~~~~Cp~C~~~~ 45 (45)
T cd00162 1 ECPICLEEFREPVVLLPCGHVFCRSCIDKWLKSGKNTCPLCRTPI 45 (45)
T ss_pred CCCcCchhhhCceEecCCCChhcHHHHHHHHHhCcCCCCCCCCcC
Confidence 4999999984 45555 999999999972 45799999864
No 140
>PF00097 zf-C3HC4: Zinc finger, C3HC4 type (RING finger); InterPro: IPR018957 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid []. Many proteins containing a RING finger play a key role in the ubiquitination pathway []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1CHC_A 2ECW_A 2Y43_B 1V87_A 2DJB_A 2H0D_B 3RPG_C 3KNV_A 2CKL_B 1JM7_A ....
Probab=97.39 E-value=9e-05 Score=52.05 Aligned_cols=33 Identities=36% Similarity=1.072 Sum_probs=28.8
Q ss_pred ccccccCCcCeE-Ee-cCcccchhhhhcC------CCCccc
Q psy2733 481 CTICMERCRNTI-FL-CGHGTCDVCAKTL------KFCHMC 513 (644)
Q Consensus 481 C~iC~~~~~~~~-~~-CgH~~C~~C~~~~------~~Cp~C 513 (644)
|.||++...+.+ +. |||.+|..|.... .+||+|
T Consensus 1 C~iC~~~~~~~~~~~~C~H~fC~~C~~~~~~~~~~~~CP~C 41 (41)
T PF00097_consen 1 CPICLEPFEDPVILLPCGHSFCRDCLRKWLENSGSVKCPLC 41 (41)
T ss_dssp ETTTSSBCSSEEEETTTSEEEEHHHHHHHHHHTSSSBTTTT
T ss_pred CCcCCccccCCCEEecCCCcchHHHHHHHHHhcCCccCCcC
Confidence 899999999999 66 9999999998842 479987
No 141
>KOG0824|consensus
Probab=97.37 E-value=6e-05 Score=74.39 Aligned_cols=43 Identities=35% Similarity=0.726 Sum_probs=38.7
Q ss_pred CcccccccCCcCeEEe-cCcccchhhhhc-----CCCCccccccccceE
Q psy2733 479 NTCTICMERCRNTIFL-CGHGTCDVCAKT-----LKFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH~~C~~C~~~-----~~~Cp~Cr~~i~~~~ 521 (644)
..|.||+......+-+ |+|.+|+.|.+. ++.|++||.+|.+.|
T Consensus 8 ~eC~IC~nt~n~Pv~l~C~HkFCyiCiKGsy~ndk~~CavCR~pids~i 56 (324)
T KOG0824|consen 8 KECLICYNTGNCPVNLYCFHKFCYICIKGSYKNDKKTCAVCRFPIDSTI 56 (324)
T ss_pred CcceeeeccCCcCccccccchhhhhhhcchhhcCCCCCceecCCCCcch
Confidence 3699999999999999 999999999993 467999999999877
No 142
>smart00184 RING Ring finger. E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)
Probab=97.31 E-value=0.00015 Score=49.65 Aligned_cols=33 Identities=36% Similarity=1.101 Sum_probs=29.1
Q ss_pred ccccccCCcCeEEe-cCcccchhhhhc-----CCCCccc
Q psy2733 481 CTICMERCRNTIFL-CGHGTCDVCAKT-----LKFCHMC 513 (644)
Q Consensus 481 C~iC~~~~~~~~~~-CgH~~C~~C~~~-----~~~Cp~C 513 (644)
|.||++.....+++ |||.+|..|... ..+||+|
T Consensus 1 C~iC~~~~~~~~~~~C~H~~c~~C~~~~~~~~~~~CP~C 39 (39)
T smart00184 1 CPICLEELKDPVVLPCGHTFCRSCIRKWLKSGNNTCPIC 39 (39)
T ss_pred CCcCccCCCCcEEecCCChHHHHHHHHHHHhCcCCCCCC
Confidence 88999999999999 999999999983 3569987
No 143
>KOG0520|consensus
Probab=97.31 E-value=0.00033 Score=80.24 Aligned_cols=114 Identities=18% Similarity=0.095 Sum_probs=87.7
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCcccCCCCcHHHHH
Q psy2733 204 KTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLM-LRDVALDIQDIDGNGLLHFL 282 (644)
Q Consensus 204 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll-~~gadvn~~d~~G~T~Lh~A 282 (644)
....|+|.+|+++..+..-.++.+++-.+......|.+|.-.+|+++. ++.++.-+|+ -.|..++.+|.+|+||||+|
T Consensus 570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~-lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA 648 (975)
T KOG0520|consen 570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAA-LGYEWAFLPISADGVAIDIRDRNGWTPLHWA 648 (975)
T ss_pred CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhh-cCCceeEEEEeecccccccccCCCCcccchH
Confidence 346789999999999999999999985345666777888888888554 4555555554 45888999999999999999
Q ss_pred HHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCC------CCCCCCCcchhhhcC
Q psy2733 283 FIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSL------ENNNRQKPLDLILED 349 (644)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~------~n~~G~TpL~~A~~~ 349 (644)
+..|+ ..++.-|+..|++.+. .+..|.|+-++|..+
T Consensus 649 a~~G~-------------------------------e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~ 690 (975)
T KOG0520|consen 649 AFRGR-------------------------------EKLVASLIELGADPGAVTDPSPETPGGKTAADLARAN 690 (975)
T ss_pred hhcCH-------------------------------HHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcc
Confidence 99998 5588888888875543 345688888888743
No 144
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=97.19 E-value=0.00028 Score=54.72 Aligned_cols=41 Identities=12% Similarity=0.192 Sum_probs=36.3
Q ss_pred CcccccccCCcCeEEe-cCcccchhhhhcC----CCCccccccccc
Q psy2733 479 NTCTICMERCRNTIFL-CGHGTCDVCAKTL----KFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~----~~Cp~Cr~~i~~ 519 (644)
..|+||.+...+.+.. |||.+|..|.... ..||+|+.+++.
T Consensus 2 ~~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~~~~cP~~~~~~~~ 47 (63)
T smart00504 2 FLCPISLEVMKDPVILPSGQTYERRAIEKWLLSHGTDPVTGQPLTH 47 (63)
T ss_pred cCCcCCCCcCCCCEECCCCCEEeHHHHHHHHHHCCCCCCCcCCCCh
Confidence 4799999999999999 9999999999843 579999999854
No 145
>KOG1100|consensus
Probab=97.17 E-value=0.00012 Score=70.74 Aligned_cols=45 Identities=33% Similarity=0.764 Sum_probs=41.2
Q ss_pred cccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeec
Q psy2733 401 CAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTT 446 (644)
Q Consensus 401 C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~ 446 (644)
|..|.+.. ..|++.||+|++.|+.|....+.||+|+......++.
T Consensus 161 Cr~C~~~~-~~VlllPCrHl~lC~~C~~~~~~CPiC~~~~~s~~~v 205 (207)
T KOG1100|consen 161 CRKCGERE-ATVLLLPCRHLCLCGICDESLRICPICRSPKTSSVEV 205 (207)
T ss_pred ceecCcCC-ceEEeecccceEecccccccCccCCCCcChhhceeec
Confidence 99999998 7788889999999999998899999999999887754
No 146
>COG5574 PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.15 E-value=0.00016 Score=70.32 Aligned_cols=42 Identities=29% Similarity=0.669 Sum_probs=36.6
Q ss_pred cCcccccccCCcCeEEe-cCcccchhhhhc------CCCCccccccccc
Q psy2733 478 MNTCTICMERCRNTIFL-CGHGTCDVCAKT------LKFCHMCRKLIEQ 519 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~------~~~Cp~Cr~~i~~ 519 (644)
...|.||++.+-..+.. |||.||-.|.-. ...||+||+.+.-
T Consensus 215 d~kC~lC~e~~~~ps~t~CgHlFC~~Cl~~~~t~~k~~~CplCRak~~p 263 (271)
T COG5574 215 DYKCFLCLEEPEVPSCTPCGHLFCLSCLLISWTKKKYEFCPLCRAKVYP 263 (271)
T ss_pred ccceeeeecccCCcccccccchhhHHHHHHHHHhhccccCchhhhhccc
Confidence 46799999999999999 999999999875 3469999988764
No 147
>KOG4692|consensus
Probab=97.12 E-value=0.00035 Score=70.08 Aligned_cols=60 Identities=28% Similarity=0.573 Sum_probs=48.0
Q ss_pred hcCcccccccCCcCeEEe-cCcccchhhhh----cCCCCccccccccceEEEEEeeecCCCCCCC
Q psy2733 477 EMNTCTICMERCRNTIFL-CGHGTCDVCAK----TLKFCHMCRKLIEQRINISRAFVSPDQNGNT 536 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~----~~~~Cp~Cr~~i~~~~~~~~~~~~~~~~~~~ 536 (644)
|+..|+||+..+++.+|. |||.-|.+|+. ..+.|-.|...|...+..--.+.+.|+.+++
T Consensus 421 Ed~lCpICyA~pi~Avf~PC~H~SC~~CI~qHlmN~k~CFfCktTv~~~~ld~~~~~~~dd~~h~ 485 (489)
T KOG4692|consen 421 EDNLCPICYAGPINAVFAPCSHRSCYGCITQHLMNCKRCFFCKTTVIDVILDKEEEEEEDDDGHK 485 (489)
T ss_pred ccccCcceecccchhhccCCCCchHHHHHHHHHhcCCeeeEecceeeehhccccccccccCCCcC
Confidence 347999999999999999 99999999999 3589999999998755443455556665544
No 148
>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1. All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.01 E-value=0.0003 Score=71.15 Aligned_cols=42 Identities=24% Similarity=0.714 Sum_probs=32.0
Q ss_pred CcccccccC---CcCe-EEe--cCcccchhhhhcC-----CCCccccccccce
Q psy2733 479 NTCTICMER---CRNT-IFL--CGHGTCDVCAKTL-----KFCHMCRKLIEQR 520 (644)
Q Consensus 479 ~~C~iC~~~---~~~~-~~~--CgH~~C~~C~~~~-----~~Cp~Cr~~i~~~ 520 (644)
..|++|.+. ..++ .+. |||.+|.+|...+ ..||.|+.++...
T Consensus 4 ~~CP~Ck~~~y~np~~kl~i~~CGH~~C~sCv~~l~~~~~~~CP~C~~~lrk~ 56 (309)
T TIGR00570 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGSGSCPECDTPLRKN 56 (309)
T ss_pred CCCCcCCCCCccCcccccccCCCCCcccHHHHHHHhcCCCCCCCCCCCccchh
Confidence 579999982 2333 232 9999999999963 3799999988864
No 149
>COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Probab=96.95 E-value=0.0003 Score=68.67 Aligned_cols=45 Identities=31% Similarity=0.712 Sum_probs=38.1
Q ss_pred hhhcCcccccccCCcCeEEe-cCcccchhhhhc----CCCCccccccccc
Q psy2733 475 IEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQ 519 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~ 519 (644)
+.....|.||.+..+-.+.+ |||.||.-|+++ -..||+||.+...
T Consensus 22 LDs~lrC~IC~~~i~ip~~TtCgHtFCslCIR~hL~~qp~CP~Cr~~~~e 71 (391)
T COG5432 22 LDSMLRCRICDCRISIPCETTCGHTFCSLCIRRHLGTQPFCPVCREDPCE 71 (391)
T ss_pred chhHHHhhhhhheeecceecccccchhHHHHHHHhcCCCCCccccccHHh
Confidence 33445699999999999999 999999999995 3689999987764
No 150
>KOG0287|consensus
Probab=96.93 E-value=0.0002 Score=71.50 Aligned_cols=47 Identities=21% Similarity=0.690 Sum_probs=39.7
Q ss_pred hhhhcCcccccccCCcCeEEe-cCcccchhhhhcC----CCCccccccccce
Q psy2733 474 EIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL----KFCHMCRKLIEQR 520 (644)
Q Consensus 474 ~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~----~~Cp~Cr~~i~~~ 520 (644)
.+.+..-|-||++-..-.+++ |||.||.-|++.. ..||.|+.+++..
T Consensus 19 ~lD~lLRC~IC~eyf~ip~itpCsHtfCSlCIR~~L~~~p~CP~C~~~~~Es 70 (442)
T KOG0287|consen 19 TLDDLLRCGICFEYFNIPMITPCSHTFCSLCIRKFLSYKPQCPTCCVTVTES 70 (442)
T ss_pred hhHHHHHHhHHHHHhcCceeccccchHHHHHHHHHhccCCCCCceecccchh
Confidence 344445699999999999999 9999999999953 6899999988753
No 151
>PF13445 zf-RING_UBOX: RING-type zinc-finger; PDB: 2CT2_A.
Probab=96.72 E-value=0.00049 Score=48.58 Aligned_cols=26 Identities=42% Similarity=1.013 Sum_probs=16.4
Q ss_pred ccccccCCcC----eEEe-cCcccchhhhhcC
Q psy2733 481 CTICMERCRN----TIFL-CGHGTCDVCAKTL 507 (644)
Q Consensus 481 C~iC~~~~~~----~~~~-CgH~~C~~C~~~~ 507 (644)
|+||.+ ..+ .+.+ |||.+|.+|..++
T Consensus 1 CpIc~e-~~~~~n~P~~L~CGH~~c~~cl~~l 31 (43)
T PF13445_consen 1 CPICKE-FSTEENPPMVLPCGHVFCKDCLQKL 31 (43)
T ss_dssp -TTT-----TTSS-EEE-SSS-EEEHHHHHHH
T ss_pred CCcccc-ccCCCCCCEEEeCccHHHHHHHHHH
Confidence 899999 677 6777 9999999999854
No 152
>KOG1785|consensus
Probab=96.47 E-value=0.0011 Score=67.51 Aligned_cols=45 Identities=29% Similarity=0.680 Sum_probs=39.4
Q ss_pred CcccccccCCcCeEEe-cCcccchhhhhcC------CCCccccccccceEEE
Q psy2733 479 NTCTICMERCRNTIFL-CGHGTCDVCAKTL------KFCHMCRKLIEQRINI 523 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~------~~Cp~Cr~~i~~~~~~ 523 (644)
..|.||-|+.+++.+. |||..|..|.... +.||+||-.|+..-.+
T Consensus 370 eLCKICaendKdvkIEPCGHLlCt~CLa~WQ~sd~gq~CPFCRcEIKGte~v 421 (563)
T KOG1785|consen 370 ELCKICAENDKDVKIEPCGHLLCTSCLAAWQDSDEGQTCPFCRCEIKGTEPV 421 (563)
T ss_pred HHHHHhhccCCCcccccccchHHHHHHHhhcccCCCCCCCceeeEeccccce
Confidence 5799999999999999 9999999998743 5899999999986433
No 153
>KOG2505|consensus
Probab=96.28 E-value=0.011 Score=62.66 Aligned_cols=72 Identities=13% Similarity=0.198 Sum_probs=59.5
Q ss_pred CHHHHHHHHHCCCCCCc------ccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHH
Q psy2733 254 QTSVINYLMLRDVALDI------QDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVK 327 (644)
Q Consensus 254 ~~~iv~~Ll~~gadvn~------~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~ 327 (644)
-...+++|.+++++.|. .+..-.|+||||+..+. -.+|.+||+
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~-------------------------------~k~v~~~Le 451 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGA-------------------------------RKCVKYFLE 451 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcch-------------------------------HHHHHHHHH
Confidence 36788889888877654 34457899999999988 569999999
Q ss_pred cCCCCCCCCCCCCCcchhhhcCCcHHHHHH
Q psy2733 328 HGAPLSLENNNRQKPLDLILEDTSLLNEIM 357 (644)
Q Consensus 328 ~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~ 357 (644)
.|+|+..+|..|+||.+++. +.++....+
T Consensus 452 eg~Dp~~kd~~Grtpy~ls~-nkdVk~~F~ 480 (591)
T KOG2505|consen 452 EGCDPSTKDGAGRTPYSLSA-NKDVKSIFI 480 (591)
T ss_pred hcCCchhcccCCCCcccccc-cHHHHHHHH
Confidence 99999999999999999998 666655555
No 154
>PF14447 Prok-RING_4: Prokaryotic RING finger family 4
Probab=96.25 E-value=0.0019 Score=47.39 Aligned_cols=43 Identities=28% Similarity=0.569 Sum_probs=36.7
Q ss_pred hcCcccccccCCcCeEEe-cCcccchhhhh--cCCCCccccccccc
Q psy2733 477 EMNTCTICMERCRNTIFL-CGHGTCDVCAK--TLKFCHMCRKLIEQ 519 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~--~~~~Cp~Cr~~i~~ 519 (644)
.+..|..|......-++. |||.+|..|-. +-..||+|-.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~pCgH~I~~~~f~~~rYngCPfC~~~~~~ 51 (55)
T PF14447_consen 6 PEQPCVFCGFVGTKGTVLPCGHLICDNCFPGERYNGCPFCGTPFEF 51 (55)
T ss_pred cceeEEEccccccccccccccceeeccccChhhccCCCCCCCcccC
Confidence 446799999998888888 99999999977 56799999998874
No 155
>KOG2177|consensus
Probab=96.18 E-value=0.0016 Score=68.05 Aligned_cols=43 Identities=37% Similarity=0.909 Sum_probs=37.6
Q ss_pred hhhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC----CCCcccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL----KFCHMCR 514 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~----~~Cp~Cr 514 (644)
....+++..|+||++.....+.+ |||.+|..|...+ -.||.||
T Consensus 7 ~~~~~~~~~C~iC~~~~~~p~~l~C~H~~c~~C~~~~~~~~~~Cp~cr 54 (386)
T KOG2177|consen 7 LEVLQEELTCPICLEYFREPVLLPCGHNFCRACLTRSWEGPLSCPVCR 54 (386)
T ss_pred hhhccccccChhhHHHhhcCccccccchHhHHHHHHhcCCCcCCcccC
Confidence 34556778999999999999888 9999999999975 4899999
No 156
>PF12678 zf-rbx1: RING-H2 zinc finger; InterPro: IPR024766 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This domain constitutes a conserved region found in proteins that participate in diverse functions relevant to chromosome metabolism and cell cycle control [].The domain contains 8 cysteine/ histidine residues which are proposed to be the conserved residues involved in zinc binding.; PDB: 4A0C_D 4A0L_I 4A0K_B 2ECL_A 1LDK_C 3RTR_F 3DQV_Y 1U6G_B 1LDJ_B 2HYE_D ....
Probab=96.17 E-value=0.0034 Score=50.17 Aligned_cols=35 Identities=31% Similarity=0.682 Sum_probs=26.6
Q ss_pred cccccccCC-------------cCeEEe-cCcccchhhhhc----CCCCcccc
Q psy2733 480 TCTICMERC-------------RNTIFL-CGHGTCDVCAKT----LKFCHMCR 514 (644)
Q Consensus 480 ~C~iC~~~~-------------~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr 514 (644)
.|.||++.. ..++.. |||.|...|..+ -..||+||
T Consensus 21 ~C~IC~~~l~~~~~~~~~~~~~~~i~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR 73 (73)
T PF12678_consen 21 NCAICREPLEDPCPECQAPQDECPIVWGPCGHIFHFHCISQWLKQNNTCPLCR 73 (73)
T ss_dssp BETTTTSBTTSTTCCHHHCTTTS-EEEETTSEEEEHHHHHHHHTTSSB-TTSS
T ss_pred cccccChhhhChhhhhcCCccccceEecccCCCEEHHHHHHHHhcCCcCCCCC
Confidence 499998876 344556 999999999983 35899998
No 157
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.17 E-value=0.0082 Score=37.08 Aligned_cols=27 Identities=37% Similarity=0.575 Sum_probs=24.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVY 27 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n 27 (644)
+||||+|+..|+.+++++|++.|.+++
T Consensus 3 ~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 3 RTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 589999999999999999999988764
No 158
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.08 E-value=0.011 Score=36.41 Aligned_cols=28 Identities=29% Similarity=0.495 Sum_probs=20.7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy2733 242 KRTPLMAAVGQGQTSVINYLMLRDVALD 269 (644)
Q Consensus 242 G~TpL~~Aa~~g~~~iv~~Ll~~gadvn 269 (644)
|.||+|+|+..++.++++.|++.|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 6677777777777777777777776653
No 159
>KOG2505|consensus
Probab=95.99 E-value=0.004 Score=65.77 Aligned_cols=40 Identities=33% Similarity=0.371 Sum_probs=38.4
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHH
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAA 41 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa 41 (644)
|+|||||..|+-++|.+||+.|+|+..+|..|+||.+++.
T Consensus 432 T~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 432 TFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 8999999999999999999999999999999999999887
No 160
>KOG3002|consensus
Probab=95.95 E-value=0.0034 Score=64.12 Aligned_cols=41 Identities=34% Similarity=0.796 Sum_probs=36.7
Q ss_pred CcccccccCCcCeEEec--Ccccchhhh-hcCCCCccccccccc
Q psy2733 479 NTCTICMERCRNTIFLC--GHGTCDVCA-KTLKFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~C--gH~~C~~C~-~~~~~Cp~Cr~~i~~ 519 (644)
..|+||++.....+|.| ||.+|..|. +...+||.||.+|..
T Consensus 49 leCPvC~~~l~~Pi~QC~nGHlaCssC~~~~~~~CP~Cr~~~g~ 92 (299)
T KOG3002|consen 49 LDCPVCFNPLSPPIFQCDNGHLACSSCRTKVSNKCPTCRLPIGN 92 (299)
T ss_pred ccCchhhccCcccceecCCCcEehhhhhhhhcccCCcccccccc
Confidence 56999999999999997 899999999 456799999999884
No 161
>COG5243 HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
Probab=95.89 E-value=0.0046 Score=62.75 Aligned_cols=43 Identities=35% Similarity=0.664 Sum_probs=33.1
Q ss_pred hhcCcccccccCCcCe-------------EEe-cCcccchhhhh----cCCCCcccccccc
Q psy2733 476 EEMNTCTICMERCRNT-------------IFL-CGHGTCDVCAK----TLKFCHMCRKLIE 518 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~-------------~~~-CgH~~C~~C~~----~~~~Cp~Cr~~i~ 518 (644)
.+++.|.||||..... .-+ |||++--.|.+ +.+.||+||.|+-
T Consensus 285 n~D~~C~ICmde~~h~~~~~~~~~~~~~pKrLpCGHilHl~CLknW~ERqQTCPICr~p~i 345 (491)
T COG5243 285 NSDRTCTICMDEMFHPDHEPLPRGLDMTPKRLPCGHILHLHCLKNWLERQQTCPICRRPVI 345 (491)
T ss_pred CCCCeEEEecccccCCCCccCcccccCCcccccccceeeHHHHHHHHHhccCCCcccCccc
Confidence 3458999999983332 344 99999888987 5689999999953
No 162
>PF13923 zf-C3HC4_2: Zinc finger, C3HC4 type (RING finger); PDB: 3HCU_A 2ECI_A 2JMD_A 3HCS_B 3HCT_A 3ZTG_A 2YUR_A 3L11_A.
Probab=95.85 E-value=0.0077 Score=41.64 Aligned_cols=35 Identities=34% Similarity=0.950 Sum_probs=26.8
Q ss_pred cccccccccceEEecCCCccccchhhHHHhh----hhhcc
Q psy2733 401 CAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMC 436 (644)
Q Consensus 401 C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~C 436 (644)
|.||.+.....+...||||. .|.+|..+.. +||.|
T Consensus 1 C~iC~~~~~~~~~~~~CGH~-fC~~C~~~~~~~~~~CP~C 39 (39)
T PF13923_consen 1 CPICLDELRDPVVVTPCGHS-FCKECIEKYLEKNPKCPVC 39 (39)
T ss_dssp ETTTTSB-SSEEEECTTSEE-EEHHHHHHHHHCTSB-TTT
T ss_pred CCCCCCcccCcCEECCCCCc-hhHHHHHHHHHCcCCCcCC
Confidence 78999987565577899999 6999997763 78876
No 163
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=95.41 E-value=0.012 Score=47.03 Aligned_cols=44 Identities=18% Similarity=0.207 Sum_probs=33.7
Q ss_pred hcCcccccccCCcCeEEe-cCcccchhhhhc-----CCCCccccccccce
Q psy2733 477 EMNTCTICMERCRNTIFL-CGHGTCDVCAKT-----LKFCHMCRKLIEQR 520 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~-----~~~Cp~Cr~~i~~~ 520 (644)
++..|+|+.+-..+.|.. |||.++..|.+. -..||+|+.+++..
T Consensus 3 ~~f~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~~~~~~P~t~~~l~~~ 52 (73)
T PF04564_consen 3 DEFLCPITGELMRDPVILPSGHTYERSAIERWLEQNGGTDPFTRQPLSES 52 (73)
T ss_dssp GGGB-TTTSSB-SSEEEETTSEEEEHHHHHHHHCTTSSB-TTT-SB-SGG
T ss_pred cccCCcCcCcHhhCceeCCcCCEEcHHHHHHHHHcCCCCCCCCCCcCCcc
Confidence 457899999999999999 999999999883 35799999998864
No 164
>PF14634 zf-RING_5: zinc-RING finger domain
Probab=95.32 E-value=0.012 Score=41.99 Aligned_cols=37 Identities=35% Similarity=0.873 Sum_probs=29.0
Q ss_pred cccccccc--cceEEecCCCccccchhhHHHhh----hhhcccc
Q psy2733 401 CAVCSELG--VANVLLKPCNHAVACEECSSRMK----KCIMCKT 438 (644)
Q Consensus 401 C~iC~d~~--~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~ 438 (644)
|.+|.+.. .....+.+|||. .|.+|...+. .||+|++
T Consensus 2 C~~C~~~~~~~~~~~l~~CgH~-~C~~C~~~~~~~~~~CP~C~k 44 (44)
T PF14634_consen 2 CNICFEKYSEERRPRLTSCGHI-FCEKCLKKLKGKSVKCPICRK 44 (44)
T ss_pred CcCcCccccCCCCeEEcccCCH-HHHHHHHhhcCCCCCCcCCCC
Confidence 67777653 234666799999 5999999987 9999984
No 165
>KOG0824|consensus
Probab=95.25 E-value=0.0073 Score=60.03 Aligned_cols=124 Identities=24% Similarity=0.497 Sum_probs=78.6
Q ss_pred CcccccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceeeeeecCCCc-------cCCC-cccc-hhH
Q psy2733 396 NVPVECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEMRVTTDGRM-------VPGI-ERCD-KSK 461 (644)
Q Consensus 396 ~~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~~~~~~g~~-------~~~~-~~~~-~~~ 461 (644)
....+|.||.-....-+. .+|+|- .|..|.+.. +.|++||.+|.+.+...-+. +++. .... ...
T Consensus 5 ~~~~eC~IC~nt~n~Pv~-l~C~Hk-FCyiCiKGsy~ndk~~CavCR~pids~i~~~psl~~~LK~n~p~~~~~t~~~~~ 82 (324)
T KOG0824|consen 5 TKKKECLICYNTGNCPVN-LYCFHK-FCYICIKGSYKNDKKTCAVCRFPIDSTIDFEPSLKYRLKPNTPEVKRITRSQAK 82 (324)
T ss_pred ccCCcceeeeccCCcCcc-ccccch-hhhhhhcchhhcCCCCCceecCCCCcchhcchhhhhhhcCCCCCCCcccccHHh
Confidence 344689999987644444 499998 699999653 46999999999988654221 1110 1111 111
Q ss_pred H------HHHHHHHHhhhhhhhcCcccccccCCcCeEEe--cCcccchhhhhc----CCCCccccccccceE
Q psy2733 462 I------ERVNYLESKISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKT----LKFCHMCRKLIEQRI 521 (644)
Q Consensus 462 ~------~~~~~l~~~~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~----~~~Cp~Cr~~i~~~~ 521 (644)
. +.+.++++.---..+...|-+|.-.-.-.... |+|.||.-|-.. -+.||.|+..++..+
T Consensus 83 rag~n~nqnvp~~~~dA~~~~~~~~~~~~~g~l~vpt~~qg~w~qf~~~~p~~~~~~~~~~~d~~~~~~pv~ 154 (324)
T KOG0824|consen 83 RAGVNGNQNVPYMKEDAGFQQDHDICYICYGKLTVPTRIQGCWHQFCYVCPKSNFAMGNDCPDCRGKISPVL 154 (324)
T ss_pred hhhhhccCCcchhhhhccccCCccceeeeeeeEEecccccCceeeeeecCCchhhhhhhccchhhcCcCcee
Confidence 1 11222221112223346788888777666665 999999888763 257999999998765
No 166
>KOG0311|consensus
Probab=95.00 E-value=0.0023 Score=64.88 Aligned_cols=54 Identities=22% Similarity=0.461 Sum_probs=43.8
Q ss_pred HHHhhhhhhhcCcccccccCCcCeEEe--cCcccchhhhhc-----CCCCccccccccceE
Q psy2733 468 LESKISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKT-----LKFCHMCRKLIEQRI 521 (644)
Q Consensus 468 l~~~~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~-----~~~Cp~Cr~~i~~~~ 521 (644)
+.-.+..+..+..|+||++-....... |+|-||.+|+-. -..||.||+...++-
T Consensus 33 i~~~l~~~~~~v~c~icl~llk~tmttkeClhrfc~~ci~~a~r~gn~ecptcRk~l~Skr 93 (381)
T KOG0311|consen 33 IMVDLAMFDIQVICPICLSLLKKTMTTKECLHRFCFDCIWKALRSGNNECPTCRKKLVSKR 93 (381)
T ss_pred heecHHHhhhhhccHHHHHHHHhhcccHHHHHHHHHHHHHHHHHhcCCCCchHHhhccccc
Confidence 444456666778999999999887777 999999999883 258999999887755
No 167
>KOG4159|consensus
Probab=94.90 E-value=0.015 Score=61.63 Aligned_cols=48 Identities=25% Similarity=0.584 Sum_probs=40.0
Q ss_pred hhhhhhcCcccccccCCcCeEEe-cCcccchhhhhc----CCCCccccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQ 519 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~ 519 (644)
...+..+..|.||+...-..+-+ |||.+|..|..+ -..||.||.++.+
T Consensus 78 ~~~~~sef~c~vc~~~l~~pv~tpcghs~c~~Cl~r~ld~~~~cp~Cr~~l~e 130 (398)
T KOG4159|consen 78 PEEIRSEFECCVCSRALYPPVVTPCGHSFCLECLDRSLDQETECPLCRDELVE 130 (398)
T ss_pred CccccchhhhhhhHhhcCCCccccccccccHHHHHHHhccCCCCccccccccc
Confidence 33445668999999999999999 999999999553 3689999988875
No 168
>KOG1785|consensus
Probab=94.76 E-value=0.011 Score=60.67 Aligned_cols=45 Identities=27% Similarity=0.741 Sum_probs=38.3
Q ss_pred ccccccccccceEEecCCCccccchhhHHHh------hhhhccccceeeeeec
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRM------KKCIMCKTFIEMRVTT 446 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~------~~Cp~Cr~~i~~~~~~ 446 (644)
-|.||.+.. ..|.+.||||+. |..|...- ..||+||..|..+.++
T Consensus 371 LCKICaend-KdvkIEPCGHLl-Ct~CLa~WQ~sd~gq~CPFCRcEIKGte~v 421 (563)
T KOG1785|consen 371 LCKICAEND-KDVKIEPCGHLL-CTSCLAAWQDSDEGQTCPFCRCEIKGTEPV 421 (563)
T ss_pred HHHHhhccC-CCcccccccchH-HHHHHHhhcccCCCCCCCceeeEeccccce
Confidence 499999987 889999999995 99998653 4899999999886553
No 169
>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=94.71 E-value=0.014 Score=58.66 Aligned_cols=46 Identities=37% Similarity=0.747 Sum_probs=39.7
Q ss_pred hhcCcccccccCCcCeEEe-cCcccchhhhhcC------CCCccccccccceE
Q psy2733 476 EEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL------KFCHMCRKLIEQRI 521 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~------~~Cp~Cr~~i~~~~ 521 (644)
++...|.||-+...-+..+ |+|..|..|+-++ +.||+||..-..++
T Consensus 59 Een~~C~ICA~~~TYs~~~PC~H~~CH~Ca~RlRALY~~K~C~~CrTE~e~V~ 111 (493)
T COG5236 59 EENMNCQICAGSTTYSARYPCGHQICHACAVRLRALYMQKGCPLCRTETEAVV 111 (493)
T ss_pred cccceeEEecCCceEEEeccCCchHHHHHHHHHHHHHhccCCCccccccceEE
Confidence 5557899999999888888 9999999999965 58999999887655
No 170
>KOG2879|consensus
Probab=94.68 E-value=0.017 Score=56.63 Aligned_cols=43 Identities=28% Similarity=0.595 Sum_probs=36.0
Q ss_pred hhcCcccccccCCcCeEEe--cCcccchhhhhcC------CCCcccccccc
Q psy2733 476 EEMNTCTICMERCRNTIFL--CGHGTCDVCAKTL------KFCHMCRKLIE 518 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~------~~Cp~Cr~~i~ 518 (644)
....+|++|-+.+...... |||.+|+.|+... -.||.|..++.
T Consensus 237 t~~~~C~~Cg~~PtiP~~~~~C~HiyCY~Ci~ts~~~~asf~Cp~Cg~~~~ 287 (298)
T KOG2879|consen 237 TSDTECPVCGEPPTIPHVIGKCGHIYCYYCIATSRLWDASFTCPLCGENVE 287 (298)
T ss_pred cCCceeeccCCCCCCCeeeccccceeehhhhhhhhcchhhcccCccCCCCc
Confidence 3446799999999987776 9999999999853 28999998876
No 171
>KOG1039|consensus
Probab=94.68 E-value=0.013 Score=60.83 Aligned_cols=46 Identities=30% Similarity=0.618 Sum_probs=39.2
Q ss_pred hhcCcccccccCCcCeE-----E---e-cCcccchhhhhc-----------CCCCccccccccceE
Q psy2733 476 EEMNTCTICMERCRNTI-----F---L-CGHGTCDVCAKT-----------LKFCHMCRKLIEQRI 521 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~-----~---~-CgH~~C~~C~~~-----------~~~Cp~Cr~~i~~~~ 521 (644)
..+.+|.|||+.....+ | . |-|.+|..|+.. .+.||+||.+....+
T Consensus 159 s~~k~CGICme~i~ek~~~~~rfgilpnC~H~~Cl~Cir~wr~~~q~~~~~sksCP~CRv~s~~v~ 224 (344)
T KOG1039|consen 159 SSEKECGICMETINEKAASERRFGILPNCNHSFCLNCIRKWRQATQFESKTSKSCPFCRVPSSFVN 224 (344)
T ss_pred cccccceehhhhccccchhhhhcccCCCcchhhhhcHhHhhhhhhccccccccCCCcccCcccccc
Confidence 44578999999999888 6 6 999999999983 367999999998766
No 172
>KOG0320|consensus
Probab=94.49 E-value=0.017 Score=53.20 Aligned_cols=44 Identities=25% Similarity=0.663 Sum_probs=34.2
Q ss_pred cccccccccccceEEe-cCCCccccchhhHHHhh----hhhccccceeee
Q psy2733 399 VECAVCSELGVANVLL-KPCNHAVACEECSSRMK----KCIMCKTFIEMR 443 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~-~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~~ 443 (644)
..|.||++.-...+.+ --|||. .|+.|..... +||.|+..|..+
T Consensus 132 ~~CPiCl~~~sek~~vsTkCGHv-FC~~Cik~alk~~~~CP~C~kkIt~k 180 (187)
T KOG0320|consen 132 YKCPICLDSVSEKVPVSTKCGHV-FCSQCIKDALKNTNKCPTCRKKITHK 180 (187)
T ss_pred cCCCceecchhhccccccccchh-HHHHHHHHHHHhCCCCCCcccccchh
Confidence 5699999975454433 489998 6999998764 899999877653
No 173
>COG5540 RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=94.48 E-value=0.017 Score=57.28 Aligned_cols=40 Identities=30% Similarity=0.622 Sum_probs=32.6
Q ss_pred CcccccccCCcC---eEEe-cCcccchhhhhcC-----CCCcccccccc
Q psy2733 479 NTCTICMERCRN---TIFL-CGHGTCDVCAKTL-----KFCHMCRKLIE 518 (644)
Q Consensus 479 ~~C~iC~~~~~~---~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~ 518 (644)
-.|.|||+.... .+.+ |.|.+-..|..+. .+||+||.+|-
T Consensus 324 veCaICms~fiK~d~~~vlPC~H~FH~~Cv~kW~~~y~~~CPvCrt~iP 372 (374)
T COG5540 324 VECAICMSNFIKNDRLRVLPCDHRFHVGCVDKWLLGYSNKCPVCRTAIP 372 (374)
T ss_pred ceEEEEhhhhcccceEEEeccCceechhHHHHHHhhhcccCCccCCCCC
Confidence 689999987654 4555 9999999999963 48999999873
No 174
>KOG1813|consensus
Probab=94.41 E-value=0.016 Score=57.55 Aligned_cols=44 Identities=30% Similarity=0.649 Sum_probs=38.5
Q ss_pred CcccccccCCcCeEEe-cCcccchhhhhc----CCCCccccccccceEE
Q psy2733 479 NTCTICMERCRNTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQRIN 522 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~~~ 522 (644)
..|.||.....+.|.. |||.||..|+.. -.+|++|.+.+.....
T Consensus 242 f~c~icr~~f~~pVvt~c~h~fc~~ca~~~~qk~~~c~vC~~~t~g~~~ 290 (313)
T KOG1813|consen 242 FKCFICRKYFYRPVVTKCGHYFCEVCALKPYQKGEKCYVCSQQTHGSFN 290 (313)
T ss_pred ccccccccccccchhhcCCceeehhhhccccccCCcceecccccccccc
Confidence 4699999999999999 999999999984 2589999999987653
No 175
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)
Probab=94.19 E-value=0.039 Score=38.78 Aligned_cols=40 Identities=38% Similarity=0.870 Sum_probs=30.2
Q ss_pred ccccccccccceEEecCCCccccchhhHHHh-----hhhhccccce
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFI 440 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i 440 (644)
.|.||.+.....+...||||. .|..|.... .+||.|+..+
T Consensus 1 ~C~iC~~~~~~~~~~~~C~H~-~c~~C~~~~~~~~~~~Cp~C~~~~ 45 (45)
T cd00162 1 ECPICLEEFREPVVLLPCGHV-FCRSCIDKWLKSGKNTCPLCRTPI 45 (45)
T ss_pred CCCcCchhhhCceEecCCCCh-hcHHHHHHHHHhCcCCCCCCCCcC
Confidence 388898876455666679999 699999754 3699998753
No 176
>PLN03208 E3 ubiquitin-protein ligase RMA2; Provisional
Probab=94.17 E-value=0.026 Score=53.37 Aligned_cols=42 Identities=24% Similarity=0.666 Sum_probs=33.6
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh--------------------hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM--------------------KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~--------------------~~Cp~Cr~~i~~ 442 (644)
.+|.||.+.. ...+..+|||. .|..|.... .+||.||..|..
T Consensus 19 ~~CpICld~~-~dPVvT~CGH~-FC~~CI~~wl~~s~~s~~~~~~~~~~k~~~~CPvCR~~Is~ 80 (193)
T PLN03208 19 FDCNICLDQV-RDPVVTLCGHL-FCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSE 80 (193)
T ss_pred cCCccCCCcC-CCcEEcCCCch-hHHHHHHHHHHhccccccccccccccCCCCcCCCCCCcCCh
Confidence 5699999986 44455699996 699999642 279999999977
No 177
>PF12861 zf-Apc11: Anaphase-promoting complex subunit 11 RING-H2 finger
Probab=94.01 E-value=0.034 Score=45.12 Aligned_cols=39 Identities=23% Similarity=0.477 Sum_probs=26.8
Q ss_pred cccccccCCcC--eEEe-cCcccchhhhhc-------CCCCcccccccc
Q psy2733 480 TCTICMERCRN--TIFL-CGHGTCDVCAKT-------LKFCHMCRKLIE 518 (644)
Q Consensus 480 ~C~iC~~~~~~--~~~~-CgH~~C~~C~~~-------~~~Cp~Cr~~i~ 518 (644)
.|+.|...-.+ +++- |+|.|-..|+.+ -..|||||++.+
T Consensus 34 ~Cp~Ck~Pgd~Cplv~g~C~H~FH~hCI~kWl~~~~~~~~CPmCR~~w~ 82 (85)
T PF12861_consen 34 CCPDCKFPGDDCPLVWGKCSHNFHMHCILKWLSTQSSKGQCPMCRQPWK 82 (85)
T ss_pred CCCCccCCCCCCceeeccCccHHHHHHHHHHHccccCCCCCCCcCCeee
Confidence 34455443333 3555 999999999872 258999999865
No 178
>KOG4692|consensus
Probab=93.99 E-value=0.043 Score=55.47 Aligned_cols=67 Identities=25% Similarity=0.490 Sum_probs=46.9
Q ss_pred hhchhHHHhhcccCCCCcccccccccccccceEEecCCCccccchhhHHHh----hhhhccccceeeeeecCCC
Q psy2733 380 QLALDEKLLARRSSCQNVPVECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRVTTDGR 449 (644)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~~~~g~ 449 (644)
+++..+........+.....-|.||...+ .+++|.||+|.. |..|..+- +.|-+|+..+.. +..+++
T Consensus 404 ~l~~~~~~~~~~~lp~sEd~lCpICyA~p-i~Avf~PC~H~S-C~~CI~qHlmN~k~CFfCktTv~~-~~ld~~ 474 (489)
T KOG4692|consen 404 QLPERKEESFNKDLPDSEDNLCPICYAGP-INAVFAPCSHRS-CYGCITQHLMNCKRCFFCKTTVID-VILDKE 474 (489)
T ss_pred hcchhhHHhhcCCCCCcccccCcceeccc-chhhccCCCCch-HHHHHHHHHhcCCeeeEecceeee-hhcccc
Confidence 33333333333334444445699999988 778999999996 99999774 699999999887 334433
No 179
>PHA02929 N1R/p28-like protein; Provisional
Probab=93.98 E-value=0.047 Score=53.92 Aligned_cols=47 Identities=32% Similarity=0.606 Sum_probs=35.1
Q ss_pred ccccccccccccc-------eEEecCCCccccchhhHHHh----hhhhccccceeeeee
Q psy2733 398 PVECAVCSELGVA-------NVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRVT 445 (644)
Q Consensus 398 ~~~C~iC~d~~~~-------~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~~ 445 (644)
..+|.||++.... .....||+|. .|..|...- ..||+||..+...++
T Consensus 174 ~~eC~ICle~~~~~~~~~~~~~vl~~C~H~-FC~~CI~~Wl~~~~tCPlCR~~~~~v~~ 231 (238)
T PHA02929 174 DKECAICMEKVYDKEIKNMYFGILSNCNHV-FCIECIDIWKKEKNTCPVCRTPFISVIK 231 (238)
T ss_pred CCCCccCCcccccCccccccceecCCCCCc-ccHHHHHHHHhcCCCCCCCCCEeeEEee
Confidence 3579999986322 1345589996 799999664 389999999987664
No 180
>PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A ....
Probab=93.96 E-value=0.039 Score=39.18 Aligned_cols=37 Identities=30% Similarity=0.715 Sum_probs=27.3
Q ss_pred ccccccccc--cceEEecCCCccccchhhHHHh----hhhhccc
Q psy2733 400 ECAVCSELG--VANVLLKPCNHAVACEECSSRM----KKCIMCK 437 (644)
Q Consensus 400 ~C~iC~d~~--~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr 437 (644)
+|.||.+.. ...+...||+|. .|.+|.... ..||+||
T Consensus 2 ~C~IC~~~~~~~~~~~~l~C~H~-fh~~Ci~~~~~~~~~CP~CR 44 (44)
T PF13639_consen 2 ECPICLEEFEDGEKVVKLPCGHV-FHRSCIKEWLKRNNSCPVCR 44 (44)
T ss_dssp CETTTTCBHHTTSCEEEETTSEE-EEHHHHHHHHHHSSB-TTTH
T ss_pred CCcCCChhhcCCCeEEEccCCCe-eCHHHHHHHHHhCCcCCccC
Confidence 589999753 245556689997 699999775 3899997
No 181
>PF00097 zf-C3HC4: Zinc finger, C3HC4 type (RING finger); InterPro: IPR018957 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid []. Many proteins containing a RING finger play a key role in the ubiquitination pathway []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1CHC_A 2ECW_A 2Y43_B 1V87_A 2DJB_A 2H0D_B 3RPG_C 3KNV_A 2CKL_B 1JM7_A ....
Probab=93.90 E-value=0.058 Score=37.54 Aligned_cols=35 Identities=37% Similarity=0.947 Sum_probs=27.4
Q ss_pred cccccccccceEEecCCCccccchhhHHHhh------hhhcc
Q psy2733 401 CAVCSELGVANVLLKPCNHAVACEECSSRMK------KCIMC 436 (644)
Q Consensus 401 C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~------~Cp~C 436 (644)
|.||.+.....+...||||. .|..|..+.. +||.|
T Consensus 1 C~iC~~~~~~~~~~~~C~H~-fC~~C~~~~~~~~~~~~CP~C 41 (41)
T PF00097_consen 1 CPICLEPFEDPVILLPCGHS-FCRDCLRKWLENSGSVKCPLC 41 (41)
T ss_dssp ETTTSSBCSSEEEETTTSEE-EEHHHHHHHHHHTSSSBTTTT
T ss_pred CCcCCccccCCCEEecCCCc-chHHHHHHHHHhcCCccCCcC
Confidence 67899887455557899999 6999997764 57776
No 182
>PF14447 Prok-RING_4: Prokaryotic RING finger family 4
Probab=93.90 E-value=0.02 Score=42.08 Aligned_cols=41 Identities=29% Similarity=0.813 Sum_probs=31.6
Q ss_pred ccccccccccceEEecCCCccccchhhHHH--hhhhhccccceee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSR--MKKCIMCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~--~~~Cp~Cr~~i~~ 442 (644)
.|..|.... ......||||++ |..|... ...||+|..+++.
T Consensus 9 ~~~~~~~~~-~~~~~~pCgH~I-~~~~f~~~rYngCPfC~~~~~~ 51 (55)
T PF14447_consen 9 PCVFCGFVG-TKGTVLPCGHLI-CDNCFPGERYNGCPFCGTPFEF 51 (55)
T ss_pred eEEEccccc-ccccccccccee-eccccChhhccCCCCCCCcccC
Confidence 478888776 445566999995 9999854 4599999988764
No 183
>KOG4739|consensus
Probab=93.86 E-value=0.031 Score=54.35 Aligned_cols=39 Identities=33% Similarity=0.808 Sum_probs=29.5
Q ss_pred cccccccCCcCeEE-e--cCcccchhhhhcC--CCCcccccccc
Q psy2733 480 TCTICMERCRNTIF-L--CGHGTCDVCAKTL--KFCHMCRKLIE 518 (644)
Q Consensus 480 ~C~iC~~~~~~~~~-~--CgH~~C~~C~~~~--~~Cp~Cr~~i~ 518 (644)
.|-.|+-.+...-| + |+|++|..|.... ..||+|+++|.
T Consensus 5 hCn~C~~~~~~~~f~LTaC~HvfC~~C~k~~~~~~C~lCkk~ir 48 (233)
T KOG4739|consen 5 HCNKCFRFPSQDPFFLTACRHVFCEPCLKASSPDVCPLCKKSIR 48 (233)
T ss_pred EeccccccCCCCceeeeechhhhhhhhcccCCccccccccceee
Confidence 47777766555443 3 9999999999954 48999999954
No 184
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=93.71 E-value=0.02 Score=53.20 Aligned_cols=43 Identities=30% Similarity=0.726 Sum_probs=36.9
Q ss_pred CcccccccCCcCeEEe-cCcccchhhhhc-C---CCCccccccccceE
Q psy2733 479 NTCTICMERCRNTIFL-CGHGTCDVCAKT-L---KFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH~~C~~C~~~-~---~~Cp~Cr~~i~~~~ 521 (644)
..|.||..--...|.. |||.||..|+.+ + ..|-+|-+....+.
T Consensus 197 F~C~iCKkdy~spvvt~CGH~FC~~Cai~~y~kg~~C~~Cgk~t~G~f 244 (259)
T COG5152 197 FLCGICKKDYESPVVTECGHSFCSLCAIRKYQKGDECGVCGKATYGRF 244 (259)
T ss_pred eeehhchhhccchhhhhcchhHHHHHHHHHhccCCcceecchhhccce
Confidence 6899999999999999 999999999984 3 57999988776654
No 185
>KOG0802|consensus
Probab=93.49 E-value=0.031 Score=62.89 Aligned_cols=43 Identities=30% Similarity=0.667 Sum_probs=35.4
Q ss_pred cCcccccccCCcC-----eEEe-cCcccchhhhh----cCCCCccccccccce
Q psy2733 478 MNTCTICMERCRN-----TIFL-CGHGTCDVCAK----TLKFCHMCRKLIEQR 520 (644)
Q Consensus 478 ~~~C~iC~~~~~~-----~~~~-CgH~~C~~C~~----~~~~Cp~Cr~~i~~~ 520 (644)
...|.||+|.... ...+ |||.++..|.. +...||+||..+...
T Consensus 291 ~~~C~IC~e~l~~~~~~~~~rL~C~Hifh~~CL~~W~er~qtCP~CR~~~~~~ 343 (543)
T KOG0802|consen 291 DELCIICLEELHSGHNITPKRLPCGHIFHDSCLRSWFERQQTCPTCRTVLYDY 343 (543)
T ss_pred CCeeeeechhhccccccccceeecccchHHHHHHHHHHHhCcCCcchhhhhcc
Confidence 4689999999988 5666 99999999988 457999999954443
No 186
>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function. The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.
Probab=93.48 E-value=0.042 Score=49.70 Aligned_cols=20 Identities=50% Similarity=1.029 Sum_probs=17.6
Q ss_pred cCcccccccCCcCeEEe-cC-c
Q psy2733 478 MNTCTICMERCRNTIFL-CG-H 497 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~-Cg-H 497 (644)
+..|+||||-|=+.|++ |. |
T Consensus 2 d~~CpICme~PHNAVLLlCSS~ 23 (162)
T PF07800_consen 2 DVTCPICMEHPHNAVLLLCSSH 23 (162)
T ss_pred CccCceeccCCCceEEEEeccc
Confidence 45799999999999999 95 5
No 187
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.32 E-value=0.36 Score=46.44 Aligned_cols=113 Identities=20% Similarity=0.266 Sum_probs=76.6
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCC----CHHHHHHH-
Q psy2733 177 LNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKR----TPLMAAVG- 251 (644)
Q Consensus 177 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~----TpL~~Aa~- 251 (644)
|--|+..-+++-+.-++... .+-.++|.+|...+..+++-+|+.+ .....+|.-.. --+.|+..
T Consensus 157 ledAV~AsN~~~i~~~VtdK---------kdA~~Am~~si~~~K~dva~~lls~--f~ft~~dv~~~~~~~ydieY~LS~ 225 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDK---------KDAHQAMWLSIGNAKEDVALYLLSK--FNFTKQDVASMEKELYDIEYLLSE 225 (284)
T ss_pred HHHHHhhcCHHHHHHHhcch---------HHHHHHHHHHhcccHHHHHHHHHhh--cceecchhhhcCcchhhHHHHHhh
Confidence 45566666666555544321 3446788888888888888888876 34555553222 23344433
Q ss_pred -cCCHHHHHHHHHCC-CCCCcc---cCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHH
Q psy2733 252 -QGQTSVINYLMLRD-VALDIQ---DIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLV 326 (644)
Q Consensus 252 -~g~~~iv~~Ll~~g-advn~~---d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll 326 (644)
..+..++++.+.+| +++|.+ -+.|.|.|--|+..++ -+++.+|+
T Consensus 226 h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~-------------------------------~emi~~Ll 274 (284)
T PF06128_consen 226 HSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKN-------------------------------SEMIAFLL 274 (284)
T ss_pred cCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCc-------------------------------HHHHHHHH
Confidence 34678888888887 567754 4679999999998888 56899999
Q ss_pred HcCCC
Q psy2733 327 KHGAP 331 (644)
Q Consensus 327 ~~Gad 331 (644)
++||-
T Consensus 275 k~GA~ 279 (284)
T PF06128_consen 275 KYGAI 279 (284)
T ss_pred HcCcc
Confidence 99984
No 188
>PHA02926 zinc finger-like protein; Provisional
Probab=93.11 E-value=0.061 Score=51.49 Aligned_cols=46 Identities=30% Similarity=0.637 Sum_probs=34.4
Q ss_pred cccccccccccc--------eEEecCCCccccchhhHHHhh----------hhhccccceeeeee
Q psy2733 399 VECAVCSELGVA--------NVLLKPCNHAVACEECSSRMK----------KCIMCKTFIEMRVT 445 (644)
Q Consensus 399 ~~C~iC~d~~~~--------~v~~~PC~h~~~C~~C~~~~~----------~Cp~Cr~~i~~~~~ 445 (644)
.+|.||++.... --.+.+|+|. .|..|...-+ .||.||+.....++
T Consensus 171 ~eCgICmE~I~eK~~~~eRrFGIL~~CnHs-FCl~CIr~Wr~~r~~~~~~rsCPiCR~~f~~I~p 234 (242)
T PHA02926 171 KECGICYEVVYSKRLENDRYFGLLDSCNHI-FCITCINIWHRTRRETGASDNCPICRTRFRNITM 234 (242)
T ss_pred CCCccCccccccccccccccccccCCCCch-HHHHHHHHHHHhccccCcCCcCCCCcceeeeecc
Confidence 569999986321 1345599998 7999997654 29999999886554
No 189
>KOG2231|consensus
Probab=93.08 E-value=0.031 Score=62.52 Aligned_cols=107 Identities=25% Similarity=0.507 Sum_probs=71.0
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhh----------hhhccccceeeeeecCCCccCCCcccchhHHHHHHHHH
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMK----------KCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLE 469 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----------~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 469 (644)
-|.||.... .-+..-.|||..+|+.|..+++ -||.|+..++...--+-+...+-.+ ..
T Consensus 2 ~c~ic~~s~-~~~~~~s~~h~~v~~~~~~R~~~~~~~~~~~~~~~vcr~~~~~~s~~~~~~~~~t~~-----------~~ 69 (669)
T KOG2231|consen 2 SCAICAFSP-DFVGRGSCGHNEVCATCVVRLRFELNNRKCSNECPVCRREVETKSNGDSSDAVGTFP-----------EG 69 (669)
T ss_pred CcceeecCc-cccccccccccccchhhhhhhhhhcccccccccCcccccceeeeccccccccccccc-----------cc
Confidence 388998876 5566669999999999997763 4699998887765443322222111 01
Q ss_pred HhhhhhhhcCcccccccCCcCeEEe--cCcccchhhhhcC------CCCccccccccc
Q psy2733 470 SKISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKTL------KFCHMCRKLIEQ 519 (644)
Q Consensus 470 ~~~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~------~~Cp~Cr~~i~~ 519 (644)
.+-.-.+++..|.||++.......+ |-|..|..|..+. +.|+.| ..+..
T Consensus 70 ~~~~~~~~e~~~~if~~d~~~y~~~~~~~~~~C~~C~~~~~~~~~~~~~~~c-~~~~s 126 (669)
T KOG2231|consen 70 RKCDFDEHEDTCVIFFADKLTYTKLEACLHHSCHICDRRFRALYNKKECLHC-TEFKS 126 (669)
T ss_pred cccccccccceeeeeeccccHHHHHHHHHhhhcCccccchhhhcccCCCccc-cchhH
Confidence 1112234556799996666555544 9998899999966 379999 55443
No 190
>KOG0823|consensus
Probab=92.51 E-value=0.061 Score=51.85 Aligned_cols=42 Identities=26% Similarity=0.764 Sum_probs=34.3
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-------hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-------KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-------~~Cp~Cr~~i~~ 442 (644)
.+|-||+|.. +..+.-.|||+ .|=.|..+- +.||+|+..|..
T Consensus 48 FdCNICLd~a-kdPVvTlCGHL-FCWpClyqWl~~~~~~~~cPVCK~~Vs~ 96 (230)
T KOG0823|consen 48 FDCNICLDLA-KDPVVTLCGHL-FCWPCLYQWLQTRPNSKECPVCKAEVSI 96 (230)
T ss_pred eeeeeecccc-CCCEEeecccc-eehHHHHHHHhhcCCCeeCCcccccccc
Confidence 5799999987 55555599999 699999663 478999999877
No 191
>PF15227 zf-C3HC4_4: zinc finger of C3HC4-type, RING; PDB: 2EGP_A 2ECV_A 2ECJ_A 2YSL_A 2YSJ_A.
Probab=92.36 E-value=0.12 Score=36.36 Aligned_cols=29 Identities=31% Similarity=0.843 Sum_probs=21.4
Q ss_pred cccccccccceEEecCCCccccchhhHHHhh
Q psy2733 401 CAVCSELGVANVLLKPCNHAVACEECSSRMK 431 (644)
Q Consensus 401 C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~ 431 (644)
|.||++.. ..-+..+|||. .|.+|..+..
T Consensus 1 CpiC~~~~-~~Pv~l~CGH~-FC~~Cl~~~~ 29 (42)
T PF15227_consen 1 CPICLDLF-KDPVSLPCGHS-FCRSCLERLW 29 (42)
T ss_dssp ETTTTSB--SSEEE-SSSSE-EEHHHHHHHH
T ss_pred CCccchhh-CCccccCCcCH-HHHHHHHHHH
Confidence 78999987 44444599998 5999998874
No 192
>COG5574 PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=92.27 E-value=0.064 Score=52.63 Aligned_cols=41 Identities=24% Similarity=0.554 Sum_probs=33.8
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh------hhhhcccccee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM------KKCIMCKTFIE 441 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~------~~Cp~Cr~~i~ 441 (644)
.+|.+|++.+ ....+.||||. .|-.|.-.+ ..||.||+.+.
T Consensus 216 ~kC~lC~e~~-~~ps~t~CgHl-FC~~Cl~~~~t~~k~~~CplCRak~~ 262 (271)
T COG5574 216 YKCFLCLEEP-EVPSCTPCGHL-FCLSCLLISWTKKKYEFCPLCRAKVY 262 (271)
T ss_pred cceeeeeccc-CCcccccccch-hhHHHHHHHHHhhccccCchhhhhcc
Confidence 5699999998 77788899998 688998553 37999998764
No 193
>smart00184 RING Ring finger. E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)
Probab=92.20 E-value=0.11 Score=35.04 Aligned_cols=34 Identities=29% Similarity=0.884 Sum_probs=25.9
Q ss_pred cccccccccceEEecCCCccccchhhHHHhh-----hhhcc
Q psy2733 401 CAVCSELGVANVLLKPCNHAVACEECSSRMK-----KCIMC 436 (644)
Q Consensus 401 C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~C 436 (644)
|.||.+.. ......||+|. .|..|..... +||.|
T Consensus 1 C~iC~~~~-~~~~~~~C~H~-~c~~C~~~~~~~~~~~CP~C 39 (39)
T smart00184 1 CPICLEEL-KDPVVLPCGHT-FCRSCIRKWLKSGNNTCPIC 39 (39)
T ss_pred CCcCccCC-CCcEEecCCCh-HHHHHHHHHHHhCcCCCCCC
Confidence 67888875 55666699999 6999997653 47776
No 194
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=91.72 E-value=0.78 Score=44.24 Aligned_cols=118 Identities=13% Similarity=0.091 Sum_probs=76.6
Q ss_pred HHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCc--cCCcCCCCCchHHHHHHh--
Q psy2733 142 PMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNL--ATVPKTSDGFTPLHVACF-- 217 (644)
Q Consensus 142 pL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~--~~~~~d~~g~T~Lh~A~~-- 217 (644)
.|--|+...+.+-+.-++.. .....+++-+|+.++..+++..|+....-. +...- ..+.--+-++..
T Consensus 156 sledAV~AsN~~~i~~~Vtd--------KkdA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~-~~~~ydieY~LS~h 226 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTD--------KKDAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM-EKELYDIEYLLSEH 226 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcc--------hHHHHHHHHHHhcccHHHHHHHHHhhcceecchhhhc-CcchhhHHHHHhhc
Confidence 45667777776666666652 123456777777777777777777643210 00000 112223333332
Q ss_pred cCcHHHHHHHHHhcCCCccc---CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q psy2733 218 NDHIEIVELLVEKYKVNINA---LDLKKRTPLMAAVGQGQTSVINYLMLRDVAL 268 (644)
Q Consensus 218 ~g~~~~v~~Ll~~~g~~in~---~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadv 268 (644)
..+..++++.++++-+++|. +-+.|.|-|--|+.+++.+++.+|+++||-.
T Consensus 227 ~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 227 SASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred CCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 34577888999887677775 3478999999999999999999999999843
No 195
>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1. All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=91.51 E-value=0.11 Score=53.04 Aligned_cols=44 Identities=23% Similarity=0.607 Sum_probs=32.4
Q ss_pred cccccccc----ccceEEecCCCccccchhhHHHhh-----hhhccccceeeee
Q psy2733 400 ECAVCSEL----GVANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEMRV 444 (644)
Q Consensus 400 ~C~iC~d~----~~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~~~ 444 (644)
.|.+|... +.......+|||. .|.+|...+. .||.|+..+...-
T Consensus 5 ~CP~Ck~~~y~np~~kl~i~~CGH~-~C~sCv~~l~~~~~~~CP~C~~~lrk~~ 57 (309)
T TIGR00570 5 GCPRCKTTKYRNPSLKLMVNVCGHT-LCESCVDLLFVRGSGSCPECDTPLRKNN 57 (309)
T ss_pred CCCcCCCCCccCcccccccCCCCCc-ccHHHHHHHhcCCCCCCCCCCCccchhh
Confidence 59999973 2111233389999 5999999974 7999999887743
No 196
>KOG0317|consensus
Probab=91.35 E-value=0.063 Score=53.38 Aligned_cols=42 Identities=26% Similarity=0.658 Sum_probs=33.2
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh----hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~ 442 (644)
..|.+|++.. .+-..-||||. .|=+|...- ..||.||.....
T Consensus 240 ~kC~LCLe~~-~~pSaTpCGHi-FCWsCI~~w~~ek~eCPlCR~~~~p 285 (293)
T KOG0317|consen 240 RKCSLCLENR-SNPSATPCGHI-FCWSCILEWCSEKAECPLCREKFQP 285 (293)
T ss_pred CceEEEecCC-CCCCcCcCcch-HHHHHHHHHHccccCCCcccccCCC
Confidence 5699999987 55667799998 699998553 379999987643
No 197
>KOG2113|consensus
Probab=91.30 E-value=0.27 Score=49.26 Aligned_cols=43 Identities=12% Similarity=-0.109 Sum_probs=37.2
Q ss_pred CcccccccCCcCeEEe-cCc-ccchhhhhcC--CCCccccccccceE
Q psy2733 479 NTCTICMERCRNTIFL-CGH-GTCDVCAKTL--KFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH-~~C~~C~~~~--~~Cp~Cr~~i~~~~ 521 (644)
+.|.+|-+.....++. ||| .+|.+|+... ..||.|......-+
T Consensus 344 ~~~~~~~~~~~st~~~~~~~n~~~~~~a~~s~~~~~~~c~~~~~~~~ 390 (394)
T KOG2113|consen 344 LKGTSAGFGLLSTIWSGGNMNLSPGSLASASASPTSSTCDHNDHTLV 390 (394)
T ss_pred cccccccCceeeeEeecCCcccChhhhhhcccCCccccccccceeee
Confidence 7899999999999999 999 7799999943 68999988776544
No 198
>PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B.
Probab=91.02 E-value=0.064 Score=38.57 Aligned_cols=36 Identities=31% Similarity=0.822 Sum_probs=16.6
Q ss_pred ccccccCC--cCeEEe---cCcccchhhhhcC-----CCCcccccc
Q psy2733 481 CTICMERC--RNTIFL---CGHGTCDVCAKTL-----KFCHMCRKL 516 (644)
Q Consensus 481 C~iC~~~~--~~~~~~---CgH~~C~~C~~~~-----~~Cp~Cr~~ 516 (644)
|++|.+.. .+..|. ||+.+|..|..++ ..||-||++
T Consensus 1 cp~C~e~~d~~d~~~~PC~Cgf~IC~~C~~~i~~~~~g~CPgCr~~ 46 (48)
T PF14570_consen 1 CPLCDEELDETDKDFYPCECGFQICRFCYHDILENEGGRCPGCREP 46 (48)
T ss_dssp -TTTS-B--CCCTT--SSTTS----HHHHHHHTTSS-SB-TTT--B
T ss_pred CCCcccccccCCCccccCcCCCcHHHHHHHHHHhccCCCCCCCCCC
Confidence 56776655 333444 8999999996643 479999986
No 199
>KOG0978|consensus
Probab=90.71 E-value=0.06 Score=60.54 Aligned_cols=40 Identities=30% Similarity=0.827 Sum_probs=34.0
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccce
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFI 440 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i 440 (644)
-.|.+|.+++ ..+++.-|+|. .|..|..+. ++||.|....
T Consensus 644 LkCs~Cn~R~-Kd~vI~kC~H~-FC~~Cvq~r~etRqRKCP~Cn~aF 688 (698)
T KOG0978|consen 644 LKCSVCNTRW-KDAVITKCGHV-FCEECVQTRYETRQRKCPKCNAAF 688 (698)
T ss_pred eeCCCccCch-hhHHHHhcchH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 3599999988 88888899998 699999664 6999998654
No 200
>KOG1814|consensus
Probab=89.80 E-value=0.16 Score=52.96 Aligned_cols=27 Identities=41% Similarity=0.850 Sum_probs=24.2
Q ss_pred CcccccccCCcC---eEEe-cCcccchhhhh
Q psy2733 479 NTCTICMERCRN---TIFL-CGHGTCDVCAK 505 (644)
Q Consensus 479 ~~C~iC~~~~~~---~~~~-CgH~~C~~C~~ 505 (644)
..|.|||+...- ++|+ |+|++|..|..
T Consensus 185 f~C~ICf~e~~G~~c~~~lpC~Hv~Ck~C~k 215 (445)
T KOG1814|consen 185 FDCCICFEEQMGQHCFKFLPCSHVFCKSCLK 215 (445)
T ss_pred ccceeeehhhcCcceeeecccchHHHHHHHH
Confidence 679999998876 7778 99999999988
No 201
>KOG4628|consensus
Probab=89.62 E-value=0.17 Score=52.47 Aligned_cols=42 Identities=31% Similarity=0.725 Sum_probs=32.9
Q ss_pred cccccccCCcC---eEEe-cCcccchhhhhcC-----CCCccccccccceE
Q psy2733 480 TCTICMERCRN---TIFL-CGHGTCDVCAKTL-----KFCHMCRKLIEQRI 521 (644)
Q Consensus 480 ~C~iC~~~~~~---~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~~~~ 521 (644)
.|.||+|.-.. ++.+ |+|.|=..|.... +.||+|+..|.+..
T Consensus 231 ~CaIClEdY~~GdklRiLPC~H~FH~~CIDpWL~~~r~~CPvCK~di~~~~ 281 (348)
T KOG4628|consen 231 TCAICLEDYEKGDKLRILPCSHKFHVNCIDPWLTQTRTFCPVCKRDIRTDS 281 (348)
T ss_pred eEEEeecccccCCeeeEecCCCchhhccchhhHhhcCccCCCCCCcCCCCC
Confidence 89999987654 5667 9999988898842 34999999887644
No 202
>TIGR00599 rad18 DNA repair protein rad18. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=88.70 E-value=0.22 Score=52.96 Aligned_cols=42 Identities=26% Similarity=0.707 Sum_probs=33.3
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh----hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~ 442 (644)
..|.||.+.. ...+..||||. .|..|.... ..||.|+..+..
T Consensus 27 l~C~IC~d~~-~~PvitpCgH~-FCs~CI~~~l~~~~~CP~Cr~~~~~ 72 (397)
T TIGR00599 27 LRCHICKDFF-DVPVLTSCSHT-FCSLCIRRCLSNQPKCPLCRAEDQE 72 (397)
T ss_pred cCCCcCchhh-hCccCCCCCCc-hhHHHHHHHHhCCCCCCCCCCcccc
Confidence 4699999976 44445699998 599999764 379999998765
No 203
>KOG1001|consensus
Probab=88.11 E-value=0.21 Score=57.10 Aligned_cols=42 Identities=29% Similarity=0.778 Sum_probs=35.4
Q ss_pred CcccccccCCcCeEEe-cCcccchhhhhcC------CCCccccccccceE
Q psy2733 479 NTCTICMERCRNTIFL-CGHGTCDVCAKTL------KFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~------~~Cp~Cr~~i~~~~ 521 (644)
..|.+|++ ....++. |||.+|.+|.... ..||+||..+....
T Consensus 455 ~~c~ic~~-~~~~~it~c~h~~c~~c~~~~i~~~~~~~~~~cr~~l~~~~ 503 (674)
T KOG1001|consen 455 HWCHICCD-LDSFFITRCGHDFCVECLKKSIQQSENAPCPLCRNVLKEKK 503 (674)
T ss_pred cccccccc-cccceeecccchHHHHHHHhccccccCCCCcHHHHHHHHHH
Confidence 78999999 7777777 9999999998832 37999999988754
No 204
>KOG0297|consensus
Probab=88.08 E-value=0.25 Score=53.17 Aligned_cols=49 Identities=31% Similarity=0.698 Sum_probs=41.2
Q ss_pred hhhcCcccccccCCcCeEE-e-cCcccchhhhhcC----CCCccccccccceEEE
Q psy2733 475 IEEMNTCTICMERCRNTIF-L-CGHGTCDVCAKTL----KFCHMCRKLIEQRINI 523 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~-~-CgH~~C~~C~~~~----~~Cp~Cr~~i~~~~~~ 523 (644)
+++...|.+|+....+.+- . |||.+|..|.... ..||.||..+.....+
T Consensus 18 ~~~~l~C~~C~~vl~~p~~~~~cgh~fC~~C~~~~~~~~~~cp~~~~~~~~~~~~ 72 (391)
T KOG0297|consen 18 LDENLLCPICMSVLRDPVQTTTCGHRFCAGCLLESLSNHQKCPVCRQELTQAEEL 72 (391)
T ss_pred CcccccCccccccccCCCCCCCCCCcccccccchhhccCcCCcccccccchhhcc
Confidence 5666899999999999999 5 9999999999853 5899999888865533
No 205
>KOG0804|consensus
Probab=87.26 E-value=0.29 Score=51.63 Aligned_cols=44 Identities=27% Similarity=0.670 Sum_probs=33.3
Q ss_pred hhhcCcccccccCCcCeE---Ee--cCcccchhhhhcC--CCCcccccccc
Q psy2733 475 IEEMNTCTICMERCRNTI---FL--CGHGTCDVCAKTL--KFCHMCRKLIE 518 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~---~~--CgH~~C~~C~~~~--~~Cp~Cr~~i~ 518 (644)
+.+...|+||+++.-..+ +. |-|.|=..|.... ..||+||-..+
T Consensus 172 ~tELPTCpVCLERMD~s~~gi~t~~c~Hsfh~~cl~~w~~~scpvcR~~q~ 222 (493)
T KOG0804|consen 172 LTELPTCPVCLERMDSSTTGILTILCNHSFHCSCLMKWWDSSCPVCRYCQS 222 (493)
T ss_pred cccCCCcchhHhhcCccccceeeeecccccchHHHhhcccCcChhhhhhcC
Confidence 345578999998876654 44 9999977888865 58999996554
No 206
>KOG0287|consensus
Probab=86.44 E-value=0.27 Score=49.73 Aligned_cols=41 Identities=24% Similarity=0.708 Sum_probs=34.6
Q ss_pred ccccccccccceEEecCCCccccchhhHHHh----hhhhccccceee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~ 442 (644)
-|.||.+-. ....+.||+|- .|+-|.... ..||.|+..+++
T Consensus 25 RC~IC~eyf-~ip~itpCsHt-fCSlCIR~~L~~~p~CP~C~~~~~E 69 (442)
T KOG0287|consen 25 RCGICFEYF-NIPMITPCSHT-FCSLCIRKFLSYKPQCPTCCVTVTE 69 (442)
T ss_pred HHhHHHHHh-cCceeccccch-HHHHHHHHHhccCCCCCceecccch
Confidence 399999976 55677799998 699999876 389999999877
No 207
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=86.25 E-value=6 Score=37.26 Aligned_cols=129 Identities=13% Similarity=0.034 Sum_probs=79.1
Q ss_pred cHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCc
Q psy2733 141 TPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDH 220 (644)
Q Consensus 141 TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~ 220 (644)
-.|..|++.+...+++..-+... ..-....+.+-.||+..+.++|+++-+.-.- .+-.+.+-.|....+
T Consensus 48 CLl~HAVk~nmL~ILqkyke~L~----~~~~~~q~LFElAC~~qkydiV~WI~qnL~i-------~~~~~iFdIA~~~kD 116 (192)
T PF03158_consen 48 CLLYHAVKYNMLSILQKYKEDLE----NERYLNQELFELACEEQKYDIVKWIGQNLHI-------YNPEDIFDIAFAKKD 116 (192)
T ss_pred HHHHHHHHcCcHHHHHHHHHHhh----cchhHHHHHHHHHHHHccccHHHHHhhccCC-------CCchhhhhhhhhccc
Confidence 45677888888888877655211 1123456777888988899999888442211 233456677777776
Q ss_pred HHHHH----HHHHhcCCCcccCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 221 IEIVE----LLVEKYKVNINALDLK--KRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 221 ~~~v~----~Ll~~~g~~in~~d~~--G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
.+... ++++.. ..-...|.. -.--|..|+..|-..-+...+++|.+++. ++|..|+..++
T Consensus 117 lsLyslGY~l~~~~~-~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynh 182 (192)
T PF03158_consen 117 LSLYSLGYKLLFNRM-MSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNH 182 (192)
T ss_pred hhHHHHHHHHHHhhc-ccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhH
Confidence 65532 222221 000001100 00236788889999988888888888753 78888888777
No 208
>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=86.00 E-value=0.7 Score=46.93 Aligned_cols=46 Identities=30% Similarity=0.767 Sum_probs=37.9
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhh------hhhccccceeeeeecC
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMK------KCIMCKTFIEMRVTTD 447 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~------~Cp~Cr~~i~~~~~~~ 447 (644)
.|.||.+.. ..+...||+|.. |.-|.-+++ .||+||..-+..+-..
T Consensus 63 ~C~ICA~~~-TYs~~~PC~H~~-CH~Ca~RlRALY~~K~C~~CrTE~e~V~fT~ 114 (493)
T COG5236 63 NCQICAGST-TYSARYPCGHQI-CHACAVRLRALYMQKGCPLCRTETEAVVFTA 114 (493)
T ss_pred eeEEecCCc-eEEEeccCCchH-HHHHHHHHHHHHhccCCCccccccceEEEec
Confidence 499998876 777777999995 999997764 8999999988876643
No 209
>KOG2660|consensus
Probab=85.93 E-value=0.2 Score=50.84 Aligned_cols=50 Identities=24% Similarity=0.587 Sum_probs=42.5
Q ss_pred hhhhhhcCcccccccCCcCeEEe--cCcccchhhhh----cCCCCccccccccceE
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAK----TLKFCHMCRKLIEQRI 521 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~----~~~~Cp~Cr~~i~~~~ 521 (644)
+.++.....|.+|-.-.++.... |-|.||.+|.- ....||+|...|.+..
T Consensus 9 ~~~~n~~itC~LC~GYliDATTI~eCLHTFCkSCivk~l~~~~~CP~C~i~ih~t~ 64 (331)
T KOG2660|consen 9 LTELNPHITCRLCGGYLIDATTITECLHTFCKSCIVKYLEESKYCPTCDIVIHKTH 64 (331)
T ss_pred hhhcccceehhhccceeecchhHHHHHHHHHHHHHHHHHHHhccCCccceeccCcc
Confidence 44556668899999999998877 99999999987 4579999999998875
No 210
>KOG2164|consensus
Probab=85.42 E-value=0.43 Score=51.35 Aligned_cols=43 Identities=23% Similarity=0.661 Sum_probs=33.6
Q ss_pred ccccccccccccceEEecCCCccccchhhHHHh---------hhhhccccceee
Q psy2733 398 PVECAVCSELGVANVLLKPCNHAVACEECSSRM---------KKCIMCKTFIEM 442 (644)
Q Consensus 398 ~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~---------~~Cp~Cr~~i~~ 442 (644)
...|.||++.+ .....--|||. .|-.|.=++ ++||+|+..|.-
T Consensus 186 ~~~CPICL~~~-~~p~~t~CGHi-FC~~CiLqy~~~s~~~~~~~CPiC~s~I~~ 237 (513)
T KOG2164|consen 186 DMQCPICLEPP-SVPVRTNCGHI-FCGPCILQYWNYSAIKGPCSCPICRSTITL 237 (513)
T ss_pred CCcCCcccCCC-CcccccccCce-eeHHHHHHHHhhhcccCCccCCchhhhccc
Confidence 35699999988 44444469998 699998554 489999999987
No 211
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=85.31 E-value=3.5 Score=33.06 Aligned_cols=48 Identities=29% Similarity=0.450 Sum_probs=32.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhc
Q psy2733 175 NILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKY 231 (644)
Q Consensus 175 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~ 231 (644)
.-+..|+..|+.++++.+++.+.. ....|..|+..-+.+++++|+++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~~---------~~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNKP---------DNDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhcc---------HHHHHHHHHHHhhHHHHHHHHHhc
Confidence 346777777777777777754411 135577777777777788777764
No 212
>COG5222 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=85.29 E-value=0.64 Score=46.21 Aligned_cols=56 Identities=29% Similarity=0.556 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHhhhhhhhc----------CcccccccCCcCeEEe--cCcccchhhhhc-----CCCCccccc
Q psy2733 460 SKIERVNYLESKISEIEEM----------NTCTICMERCRNTIFL--CGHGTCDVCAKT-----LKFCHMCRK 515 (644)
Q Consensus 460 ~~~~~~~~l~~~~~~~~~~----------~~C~iC~~~~~~~~~~--CgH~~C~~C~~~-----~~~Cp~Cr~ 515 (644)
.+.+.-++-.+.+....++ ..|+.|.--.++.+-+ |||.+|.+|+.. -..||.|..
T Consensus 246 qsWe~Yq~r~~a~~~~~Dqv~k~~~~~i~LkCplc~~Llrnp~kT~cC~~~fc~eci~~al~dsDf~CpnC~r 318 (427)
T COG5222 246 QSWEKYQQRTKAVAEIPDQVYKMQPPNISLKCPLCHCLLRNPMKTPCCGHTFCDECIGTALLDSDFKCPNCSR 318 (427)
T ss_pred HHHHHHHHHHHhhhhCchhhhccCCCCccccCcchhhhhhCcccCccccchHHHHHHhhhhhhccccCCCccc
Confidence 3344444444444444444 7899999888888777 999999999993 358999986
No 213
>KOG2879|consensus
Probab=85.26 E-value=0.67 Score=45.86 Aligned_cols=44 Identities=27% Similarity=0.656 Sum_probs=36.0
Q ss_pred cccccccccccccceEEecCCCccccchhhHHHhh------hhhcccccee
Q psy2733 397 VPVECAVCSELGVANVLLKPCNHAVACEECSSRMK------KCIMCKTFIE 441 (644)
Q Consensus 397 ~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~------~Cp~Cr~~i~ 441 (644)
+..+|.+|.+.+.--....||||. .|.-|...-. .||.|.+.++
T Consensus 238 ~~~~C~~Cg~~PtiP~~~~~C~Hi-yCY~Ci~ts~~~~asf~Cp~Cg~~~~ 287 (298)
T KOG2879|consen 238 SDTECPVCGEPPTIPHVIGKCGHI-YCYYCIATSRLWDASFTCPLCGENVE 287 (298)
T ss_pred CCceeeccCCCCCCCeeeccccce-eehhhhhhhhcchhhcccCccCCCCc
Confidence 346899999988666777799996 6999997653 8999998775
No 214
>KOG0804|consensus
Probab=84.57 E-value=0.48 Score=50.01 Aligned_cols=74 Identities=26% Similarity=0.485 Sum_probs=51.9
Q ss_pred cccccccccc---ceEEecCCCccccchhhHHHhh--hhhccccceeeeeecCCCccCCCcccchhHHHHHHHHHHhhhh
Q psy2733 400 ECAVCSELGV---ANVLLKPCNHAVACEECSSRMK--KCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISE 474 (644)
Q Consensus 400 ~C~iC~d~~~---~~v~~~PC~h~~~C~~C~~~~~--~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ 474 (644)
-|.||+++.- ..++-.+|.|--- -.|...-. .||+||..-. ..
T Consensus 177 TCpVCLERMD~s~~gi~t~~c~Hsfh-~~cl~~w~~~scpvcR~~q~-------------------------------p~ 224 (493)
T KOG0804|consen 177 TCPVCLERMDSSTTGILTILCNHSFH-CSCLMKWWDSSCPVCRYCQS-------------------------------PS 224 (493)
T ss_pred CcchhHhhcCccccceeeeecccccc-hHHHhhcccCcChhhhhhcC-------------------------------cc
Confidence 3999998632 3346668999754 24554433 8999995442 12
Q ss_pred hhhcCcccccccCCcCeEEe-cCcccchhhhh
Q psy2733 475 IEEMNTCTICMERCRNTIFL-CGHGTCDVCAK 505 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~ 505 (644)
..+...|.+|--..--++++ |||+.|....+
T Consensus 225 ~ve~~~c~~c~~~~~LwicliCg~vgcgrY~e 256 (493)
T KOG0804|consen 225 VVESSLCLACGCTEDLWICLICGNVGCGRYKE 256 (493)
T ss_pred hhhhhhhhhhcccccEEEEEEccceecccccc
Confidence 34556799998888889999 99988877655
No 215
>KOG3039|consensus
Probab=84.53 E-value=0.66 Score=45.01 Aligned_cols=44 Identities=18% Similarity=0.366 Sum_probs=35.7
Q ss_pred hcCcccccccCCcC----eEEe-cCcccchhhhhcC----CCCccccccccce
Q psy2733 477 EMNTCTICMERCRN----TIFL-CGHGTCDVCAKTL----KFCHMCRKLIEQR 520 (644)
Q Consensus 477 ~~~~C~iC~~~~~~----~~~~-CgH~~C~~C~~~~----~~Cp~Cr~~i~~~ 520 (644)
....|+||.+...+ +++. |||++|.+|.+++ ..||+|-.+.+.+
T Consensus 220 ~ryiCpvtrd~LtNt~~ca~Lr~sg~Vv~~ecvEklir~D~v~pv~d~plkdr 272 (303)
T KOG3039|consen 220 KRYICPVTRDTLTNTTPCAVLRPSGHVVTKECVEKLIRKDMVDPVTDKPLKDR 272 (303)
T ss_pred cceecccchhhhcCccceEEeccCCcEeeHHHHHHhccccccccCCCCcCccc
Confidence 55789999876655 3455 9999999999975 3699999999875
No 216
>PF04641 Rtf2: Rtf2 RING-finger
Probab=84.27 E-value=0.69 Score=46.90 Aligned_cols=45 Identities=24% Similarity=0.483 Sum_probs=36.6
Q ss_pred hhcCcccccccCCc---CeEEe--cCcccchhhhhcCC---CCccccccccce
Q psy2733 476 EEMNTCTICMERCR---NTIFL--CGHGTCDVCAKTLK---FCHMCRKLIEQR 520 (644)
Q Consensus 476 ~~~~~C~iC~~~~~---~~~~~--CgH~~C~~C~~~~~---~Cp~Cr~~i~~~ 520 (644)
.....|+|...... ..|++ |||+++..+...++ .||+|-.+.+..
T Consensus 111 ~~~~~CPvt~~~~~~~~~fv~l~~cG~V~s~~alke~k~~~~Cp~c~~~f~~~ 163 (260)
T PF04641_consen 111 EGRFICPVTGKEFNGKHKFVYLRPCGCVFSEKALKELKKSKKCPVCGKPFTEE 163 (260)
T ss_pred CceeECCCCCcccCCceeEEEEcCCCCEeeHHHHHhhcccccccccCCccccC
Confidence 44578999987663 35565 99999999999887 799999998864
No 217
>PF13445 zf-RING_UBOX: RING-type zinc-finger; PDB: 2CT2_A.
Probab=84.23 E-value=0.82 Score=32.27 Aligned_cols=30 Identities=27% Similarity=0.954 Sum_probs=15.5
Q ss_pred ccccccccc--ceEEecCCCccccchhhHHHhh
Q psy2733 401 CAVCSELGV--ANVLLKPCNHAVACEECSSRMK 431 (644)
Q Consensus 401 C~iC~d~~~--~~v~~~PC~h~~~C~~C~~~~~ 431 (644)
|.||.+... ..-...||||. .|.+|..++.
T Consensus 1 CpIc~e~~~~~n~P~~L~CGH~-~c~~cl~~l~ 32 (43)
T PF13445_consen 1 CPICKEFSTEENPPMVLPCGHV-FCKDCLQKLS 32 (43)
T ss_dssp -TTT----TTSS-EEE-SSS-E-EEHHHHHHHH
T ss_pred CCccccccCCCCCCEEEeCccH-HHHHHHHHHH
Confidence 667776310 11344589998 5999998874
No 218
>KOG1002|consensus
Probab=83.83 E-value=0.31 Score=52.13 Aligned_cols=41 Identities=24% Similarity=0.597 Sum_probs=35.1
Q ss_pred cCcccccccCCcCeEEe-cCcccchhhhhc---------CCCCcccccccc
Q psy2733 478 MNTCTICMERCRNTIFL-CGHGTCDVCAKT---------LKFCHMCRKLIE 518 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~---------~~~Cp~Cr~~i~ 518 (644)
+..|.+|.|...+.+-. |.|.+|..|... --.||.|-.+.+
T Consensus 536 ~~~C~lc~d~aed~i~s~ChH~FCrlCi~eyv~~f~~~~nvtCP~C~i~Ls 586 (791)
T KOG1002|consen 536 EVECGLCHDPAEDYIESSCHHKFCRLCIKEYVESFMENNNVTCPVCHIGLS 586 (791)
T ss_pred ceeecccCChhhhhHhhhhhHHHHHHHHHHHHHhhhcccCCCCcccccccc
Confidence 37999999999999999 999999999951 258999987665
No 219
>KOG4367|consensus
Probab=83.50 E-value=0.48 Score=49.44 Aligned_cols=33 Identities=36% Similarity=0.889 Sum_probs=29.3
Q ss_pred hhhcCcccccccCCcCeEEe-cCcccchhhhhcC
Q psy2733 475 IEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL 507 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~ 507 (644)
++++..|+||-.-..+.+++ |||..|.-|+..+
T Consensus 1 meeelkc~vc~~f~~epiil~c~h~lc~~ca~~~ 34 (699)
T KOG4367|consen 1 MEEELKCPVCGSFYREPIILPCSHNLCQACARNI 34 (699)
T ss_pred CcccccCceehhhccCceEeecccHHHHHHHHhh
Confidence 36778899999999999999 9999999999843
No 220
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=83.45 E-value=4.1 Score=38.30 Aligned_cols=129 Identities=12% Similarity=0.047 Sum_probs=81.6
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHH----HHHHhcC
Q psy2733 122 DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTE----KILALNR 197 (644)
Q Consensus 122 v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~----~Ll~~~~ 197 (644)
..+|.++.-.....-...++.+-.|++..+.++|+|+-+. ..-.+-.+.+..|....+.++.. .++.+..
T Consensus 59 L~ILqkyke~L~~~~~~~q~LFElAC~~qkydiV~WI~qn------L~i~~~~~iFdIA~~~kDlsLyslGY~l~~~~~~ 132 (192)
T PF03158_consen 59 LSILQKYKEDLENERYLNQELFELACEEQKYDIVKWIGQN------LHIYNPEDIFDIAFAKKDLSLYSLGYKLLFNRMM 132 (192)
T ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHccccHHHHHhhc------cCCCCchhhhhhhhhccchhHHHHHHHHHHhhcc
Confidence 4444444333321123567888999999999999999652 11223345677888888877632 2333221
Q ss_pred CccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2733 198 NLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLML 263 (644)
Q Consensus 198 ~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~ 263 (644)
.......+.--.--|..|+..|-...+...++. |.+++. ++|-.|+.+++..++.+++.
T Consensus 133 ~~~~~d~~~ll~~hl~~a~~kgll~F~letlky-gg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 133 SEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKY-GGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred cccccCHHHHHHHHHHHHHHCCCHHHHHHHHHc-CCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 110000000011246789999999999988988 445542 79999999999999999874
No 221
>KOG0828|consensus
Probab=82.46 E-value=0.42 Score=50.81 Aligned_cols=44 Identities=32% Similarity=0.683 Sum_probs=32.3
Q ss_pred hhhcCcccccccCC-----------------cCeEEe-cCcccchhhhhc----CC-CCcccccccc
Q psy2733 475 IEEMNTCTICMERC-----------------RNTIFL-CGHGTCDVCAKT----LK-FCHMCRKLIE 518 (644)
Q Consensus 475 ~~~~~~C~iC~~~~-----------------~~~~~~-CgH~~C~~C~~~----~~-~Cp~Cr~~i~ 518 (644)
.++...|+|||... ++..++ |-|.+-..|..+ .+ .||.||.++-
T Consensus 568 ~~~t~dC~ICMt~I~l~~~~s~~~~~~~~~~~nYm~tPC~HifH~~CL~~WMd~ykl~CPvCR~pLP 634 (636)
T KOG0828|consen 568 VRRTNDCVICMTPIDLRSTGSDCMVASMMVRRNYMLTPCHHIFHRQCLLQWMDTYKLICPVCRCPLP 634 (636)
T ss_pred hhccccceEeccccceeeccCcchhhhhhhhccccccchHHHHHHHHHHHHHhhhcccCCccCCCCC
Confidence 45567899999643 234556 888888899884 23 8999999864
No 222
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=81.45 E-value=1.2 Score=34.10 Aligned_cols=40 Identities=8% Similarity=0.100 Sum_probs=30.2
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhh----hhhcccccee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMCKTFIE 441 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~ 441 (644)
.|.||.+.. ..-+..||||. .|.+|..... .||.|+..+.
T Consensus 3 ~Cpi~~~~~-~~Pv~~~~G~v-~~~~~i~~~~~~~~~cP~~~~~~~ 46 (63)
T smart00504 3 LCPISLEVM-KDPVILPSGQT-YERRAIEKWLLSHGTDPVTGQPLT 46 (63)
T ss_pred CCcCCCCcC-CCCEECCCCCE-EeHHHHHHHHHHCCCCCCCcCCCC
Confidence 388998876 34455699976 6999997763 6999998763
No 223
>KOG2932|consensus
Probab=80.66 E-value=0.74 Score=46.17 Aligned_cols=43 Identities=23% Similarity=0.519 Sum_probs=30.8
Q ss_pred CcccccccCCcC-eEEe-cCcccchhhhhc--CCCCccccccccceE
Q psy2733 479 NTCTICMERCRN-TIFL-CGHGTCDVCAKT--LKFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~~~-~~~~-CgH~~C~~C~~~--~~~Cp~Cr~~i~~~~ 521 (644)
..|.-|--..+- -.++ |.|+||.+|+.. .+.||.|-.+|.+.-
T Consensus 91 HfCd~Cd~PI~IYGRmIPCkHvFCl~CAr~~~dK~Cp~C~d~VqrIe 137 (389)
T KOG2932|consen 91 HFCDRCDFPIAIYGRMIPCKHVFCLECARSDSDKICPLCDDRVQRIE 137 (389)
T ss_pred EeecccCCcceeeecccccchhhhhhhhhcCccccCcCcccHHHHHH
Confidence 456666433333 2345 999999999995 569999998887643
No 224
>PF10217 DUF2039: Uncharacterized conserved protein (DUF2039); InterPro: IPR019351 This entry is a region of approximately 100 residues containing three pairs of cysteine residues. The region is conserved from plants to humans but its function is unknown.
Probab=80.39 E-value=0.16 Score=41.93 Aligned_cols=41 Identities=32% Similarity=0.741 Sum_probs=32.9
Q ss_pred hhhhhcCcccccccCCcCeEEecCcccchhhhhcCCCCcccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFLCGHGTCDVCAKTLKFCHMCRKL 516 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~CgH~~C~~C~~~~~~Cp~Cr~~ 516 (644)
..+.....|..|....+.-++ |.+|..|+.....|+-|..+
T Consensus 50 KpLt~p~kC~~C~qktVk~AY---h~iC~~Ca~~~~vCaKC~k~ 90 (92)
T PF10217_consen 50 KPLTQPKKCNKCQQKTVKHAY---HVICDPCAKELKVCAKCGKP 90 (92)
T ss_pred ccCCCCccccccccchHHHHH---HHHHHHHHHhhccCcccCCC
Confidence 344556779999988775554 78899999999999999875
No 225
>KOG1701|consensus
Probab=80.14 E-value=0.68 Score=48.60 Aligned_cols=90 Identities=21% Similarity=0.398 Sum_probs=56.8
Q ss_pred cccccccccceEEecCCCccccchhhHH-HhhhhhccccceeeeeecCCCccCCCcccchhHHHHHHHHHHhhhhhhhc-
Q psy2733 401 CAVCSELGVANVLLKPCNHAVACEECSS-RMKKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISEIEEM- 478 (644)
Q Consensus 401 C~iC~d~~~~~v~~~PC~h~~~C~~C~~-~~~~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~- 478 (644)
|..|.... +--.|.-=...+.|+.|-+ .+.+|-.|...|.++| ++.+...
T Consensus 305 C~~C~r~L-~Gq~FY~v~~k~~CE~cyq~tlekC~~Cg~~I~d~i---------------------------LrA~Gkay 356 (468)
T KOG1701|consen 305 CRTCRRQL-AGQSFYQVDGKPYCEGCYQDTLEKCNKCGEPIMDRI---------------------------LRALGKAY 356 (468)
T ss_pred hHhhhhhh-ccccccccCCcccchHHHHHHHHHHhhhhhHHHHHH---------------------------HHhccccc
Confidence 44444443 3333434445567888874 4679999998887766 3333333
Q ss_pred ----CcccccccCCcCeEEe--cCc-ccchhhhhcC--CCCcccccccc
Q psy2733 479 ----NTCTICMERCRNTIFL--CGH-GTCDVCAKTL--KFCHMCRKLIE 518 (644)
Q Consensus 479 ----~~C~iC~~~~~~~~~~--CgH-~~C~~C~~~~--~~Cp~Cr~~i~ 518 (644)
..|++|..-.-.+-|+ =.- ++|..|..+. .+|-+|-.+|-
T Consensus 357 Hp~CF~Cv~C~r~ldgipFtvd~~n~v~Cv~dfh~kfAPrCs~C~~PI~ 405 (468)
T KOG1701|consen 357 HPGCFTCVVCARCLDGIPFTVDSQNNVYCVPDFHKKFAPRCSVCGNPIL 405 (468)
T ss_pred CCCceEEEEeccccCCccccccCCCceeeehhhhhhcCcchhhccCCcc
Confidence 6788887777667776 233 5577776643 57888888774
No 226
>PF14835 zf-RING_6: zf-RING of BARD1-type protein; PDB: 1JM7_B.
Probab=79.96 E-value=0.75 Score=35.21 Aligned_cols=40 Identities=28% Similarity=0.698 Sum_probs=19.7
Q ss_pred ccccccccccceEEecCCCccccchhhHHHh--hhhhccccce
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRM--KKCIMCKTFI 440 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~--~~Cp~Cr~~i 440 (644)
.|.+|.+.....|.+--|.|. .|+.|...- ..||+|..+-
T Consensus 9 rCs~C~~~l~~pv~l~~CeH~-fCs~Ci~~~~~~~CPvC~~Pa 50 (65)
T PF14835_consen 9 RCSICFDILKEPVCLGGCEHI-FCSSCIRDCIGSECPVCHTPA 50 (65)
T ss_dssp S-SSS-S--SS-B---SSS---B-TTTGGGGTTTB-SSS--B-
T ss_pred CCcHHHHHhcCCceeccCccH-HHHHHhHHhcCCCCCCcCChH
Confidence 389999876344556689998 699999765 5899999765
No 227
>KOG0825|consensus
Probab=79.87 E-value=0.36 Score=54.10 Aligned_cols=43 Identities=21% Similarity=0.498 Sum_probs=32.8
Q ss_pred CcccccccCCcCe----EEecCcccchhhhhcC----CCCccccccccceE
Q psy2733 479 NTCTICMERCRNT----IFLCGHGTCDVCAKTL----KFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~~~~----~~~CgH~~C~~C~~~~----~~Cp~Cr~~i~~~~ 521 (644)
..|++|+....+- -..|+|.||..|.... ..||+||....+++
T Consensus 124 ~~CP~Ci~s~~DqL~~~~k~c~H~FC~~Ci~sWsR~aqTCPiDR~EF~~v~ 174 (1134)
T KOG0825|consen 124 NQCPNCLKSCNDQLEESEKHTAHYFCEECVGSWSRCAQTCPVDRGEFGEVK 174 (1134)
T ss_pred hhhhHHHHHHHHHhhccccccccccHHHHhhhhhhhcccCchhhhhhheee
Confidence 4699997655542 2239999999999854 58999999888755
No 228
>COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Probab=79.77 E-value=0.95 Score=44.92 Aligned_cols=41 Identities=22% Similarity=0.454 Sum_probs=32.6
Q ss_pred ccccccccccceEEecCCCccccchhhHHHh----hhhhccccceee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~ 442 (644)
-|.||-+.. ..-..-||||- .|+-|..+. ..||.||....+
T Consensus 27 rC~IC~~~i-~ip~~TtCgHt-FCslCIR~hL~~qp~CP~Cr~~~~e 71 (391)
T COG5432 27 RCRICDCRI-SIPCETTCGHT-FCSLCIRRHLGTQPFCPVCREDPCE 71 (391)
T ss_pred Hhhhhhhee-ecceecccccc-hhHHHHHHHhcCCCCCccccccHHh
Confidence 499999876 44455599998 699999775 389999987654
No 229
>KOG1734|consensus
Probab=79.62 E-value=0.75 Score=45.26 Aligned_cols=44 Identities=18% Similarity=0.616 Sum_probs=32.1
Q ss_pred hcCcccccccCCcCeE----------Ee-cCcccchhhhh------cCCCCccccccccce
Q psy2733 477 EMNTCTICMERCRNTI----------FL-CGHGTCDVCAK------TLKFCHMCRKLIEQR 520 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~----------~~-CgH~~C~~C~~------~~~~Cp~Cr~~i~~~ 520 (644)
++.+|.||-.+....+ -+ |+|++-+.|++ +-+.||.|.+.|+..
T Consensus 223 ~d~vCaVCg~~~~~s~~eegvienty~LsCnHvFHEfCIrGWcivGKkqtCPYCKekVdl~ 283 (328)
T KOG1734|consen 223 SDSVCAVCGQQIDVSVDEEGVIENTYKLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLK 283 (328)
T ss_pred CcchhHhhcchheeecchhhhhhhheeeecccchHHHhhhhheeecCCCCCchHHHHhhHh
Confidence 3467888865544333 34 99999999998 346899999888753
No 230
>KOG4185|consensus
Probab=78.33 E-value=0.96 Score=46.81 Aligned_cols=38 Identities=39% Similarity=0.947 Sum_probs=28.5
Q ss_pred cccccccCCcC------eEEe-cCcccchhhhhcC-----CCCccccccc
Q psy2733 480 TCTICMERCRN------TIFL-CGHGTCDVCAKTL-----KFCHMCRKLI 517 (644)
Q Consensus 480 ~C~iC~~~~~~------~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i 517 (644)
.|-||-+.... ...+ |||.+|..|+..+ ..||.||.+.
T Consensus 5 ~c~~c~~~~s~~~~~~~p~~l~c~h~~c~~c~~~l~~~~~i~cpfcR~~~ 54 (296)
T KOG4185|consen 5 ECEICNEDYSSEDGDHIPRVLKCGHTICQNCASKLLGNSRILCPFCRETT 54 (296)
T ss_pred ceeecCccccccCcccCCcccccCceehHhHHHHHhcCceeeccCCCCcc
Confidence 57777654433 3445 9999999999965 3689999986
No 231
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=77.70 E-value=3.3 Score=33.19 Aligned_cols=43 Identities=21% Similarity=0.194 Sum_probs=37.2
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH
Q psy2733 3 LLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN 52 (644)
Q Consensus 3 pLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL 52 (644)
-|..|+..|+.|+++.+++.+ .++ ...|.+|+..-+.+++++|
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l 51 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWL 51 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHH
Confidence 478999999999999999865 332 4679999999999999999
No 232
>PF11789 zf-Nse: Zinc-finger of the MIZ type in Nse subunit; PDB: 2YU4_A 3HTK_C.
Probab=76.38 E-value=1.6 Score=32.97 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=23.8
Q ss_pred hcCcccccccCCcCeEEe--cCcccchhhhhc------CCCCcc
Q psy2733 477 EMNTCTICMERCRNTIFL--CGHGTCDVCAKT------LKFCHM 512 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~------~~~Cp~ 512 (644)
-...|+|.+....+.|-. |||.|....+.. ..+||+
T Consensus 10 ~~~~CPiT~~~~~~PV~s~~C~H~fek~aI~~~i~~~~~~~CPv 53 (57)
T PF11789_consen 10 ISLKCPITLQPFEDPVKSKKCGHTFEKEAILQYIQRNGSKRCPV 53 (57)
T ss_dssp --SB-TTTSSB-SSEEEESSS--EEEHHHHHHHCTTTS-EE-SC
T ss_pred eccCCCCcCChhhCCcCcCCCCCeecHHHHHHHHHhcCCCCCCC
Confidence 346899999999999987 999998888773 236887
No 233
>KOG3579|consensus
Probab=76.25 E-value=1.1 Score=44.33 Aligned_cols=27 Identities=41% Similarity=0.951 Sum_probs=25.3
Q ss_pred CcccccccCCcCeEEe-c----Ccccchhhhh
Q psy2733 479 NTCTICMERCRNTIFL-C----GHGTCDVCAK 505 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-C----gH~~C~~C~~ 505 (644)
..|++|.|+..+..|. | .|.||+.|++
T Consensus 269 LcCTLC~ERLEDTHFVQCPSVp~HKFCFPCSR 300 (352)
T KOG3579|consen 269 LCCTLCHERLEDTHFVQCPSVPSHKFCFPCSR 300 (352)
T ss_pred eeehhhhhhhccCceeecCCCcccceecccCH
Confidence 6899999999999999 9 5899999988
No 234
>COG5175 MOT2 Transcriptional repressor [Transcription]
Probab=75.25 E-value=0.92 Score=45.96 Aligned_cols=45 Identities=27% Similarity=0.768 Sum_probs=32.5
Q ss_pred hhcCcccccccCCcC--eEEe---cCcccchhhhhcC-----CCCccccccccce
Q psy2733 476 EEMNTCTICMERCRN--TIFL---CGHGTCDVCAKTL-----KFCHMCRKLIEQR 520 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~--~~~~---CgH~~C~~C~~~~-----~~Cp~Cr~~i~~~ 520 (644)
.++..|+.|++..-- --|. ||-.+|.-|...+ .+||.||..-+..
T Consensus 12 deed~cplcie~mditdknf~pc~cgy~ic~fc~~~irq~lngrcpacrr~y~de 66 (480)
T COG5175 12 DEEDYCPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNLNGRCPACRRKYDDE 66 (480)
T ss_pred cccccCcccccccccccCCcccCCcccHHHHHHHHHHHhhccCCChHhhhhcccc
Confidence 344569999987532 2233 7888899998865 4899999877764
No 235
>KOG3161|consensus
Probab=74.00 E-value=0.98 Score=49.69 Aligned_cols=37 Identities=30% Similarity=0.824 Sum_probs=28.3
Q ss_pred cCccccccc----CCcCeEEe-cCcccchhhhhcC--CCCccccc
Q psy2733 478 MNTCTICME----RCRNTIFL-CGHGTCDVCAKTL--KFCHMCRK 515 (644)
Q Consensus 478 ~~~C~iC~~----~~~~~~~~-CgH~~C~~C~~~~--~~Cp~Cr~ 515 (644)
-..|.||+. .....|++ |||.+|..|++.+ ..|| |..
T Consensus 11 ~l~c~ic~n~f~~~~~~Pvsl~cghtic~~c~~~lyn~scp-~~~ 54 (861)
T KOG3161|consen 11 LLLCDICLNLFVVQRLEPVSLQCGHTICGHCVQLLYNASCP-TKR 54 (861)
T ss_pred HhhchHHHHHHHHHhcCcccccccchHHHHHHHhHhhccCC-CCc
Confidence 357999943 44557888 9999999999976 5898 543
No 236
>COG5540 RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=73.90 E-value=2.2 Score=42.78 Aligned_cols=41 Identities=34% Similarity=0.745 Sum_probs=29.6
Q ss_pred cccccccccc--cceEEecCCCccccchhhHHHh-----hhhhccccce
Q psy2733 399 VECAVCSELG--VANVLLKPCNHAVACEECSSRM-----KKCIMCKTFI 440 (644)
Q Consensus 399 ~~C~iC~d~~--~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i 440 (644)
.+|.||++.. ...+...||.|.- =..|..+- -+||+||.+|
T Consensus 324 veCaICms~fiK~d~~~vlPC~H~F-H~~Cv~kW~~~y~~~CPvCrt~i 371 (374)
T COG5540 324 VECAICMSNFIKNDRLRVLPCDHRF-HVGCVDKWLLGYSNKCPVCRTAI 371 (374)
T ss_pred ceEEEEhhhhcccceEEEeccCcee-chhHHHHHHhhhcccCCccCCCC
Confidence 5799999752 2345555999984 46777652 3899999876
No 237
>KOG1428|consensus
Probab=73.75 E-value=1.1 Score=53.53 Aligned_cols=43 Identities=26% Similarity=0.600 Sum_probs=30.7
Q ss_pred cCcccccccCCcC---eEEe-cCcccchhhhhcC--------------CCCccccccccce
Q psy2733 478 MNTCTICMERCRN---TIFL-CGHGTCDVCAKTL--------------KFCHMCRKLIEQR 520 (644)
Q Consensus 478 ~~~C~iC~~~~~~---~~~~-CgH~~C~~C~~~~--------------~~Cp~Cr~~i~~~ 520 (644)
+..|.||+...-. .+-+ |||.|-..|.+++ -.||+|..+|...
T Consensus 3486 DDmCmICFTE~L~AAP~IqL~C~HiFHlqC~R~vLE~RW~GPRItF~FisCPiC~n~InH~ 3546 (3738)
T KOG1428|consen 3486 DDMCMICFTEALSAAPAIQLDCSHIFHLQCCRRVLENRWLGPRITFGFISCPICKNKINHI 3546 (3738)
T ss_pred CceEEEEehhhhCCCcceecCCccchhHHHHHHHHHhcccCCeeEEeeeecccccchhhhH
Confidence 3579999976543 3344 9998866666532 2699999999864
No 238
>PF10367 Vps39_2: Vacuolar sorting protein 39 domain 2; InterPro: IPR019453 This entry represents a domain found in the vacuolar sorting protein Vps39 and transforming growth factor beta receptor-associated protein Trap1. Vps39, a component of the C-Vps complex, is thought to be required for the fusion of endosomes and other types of transport intermediates with the vacuole [, ]. In Saccharomyces cerevisiae (Baker's yeast), Vps39 has been shown to stimulate nucleotide exchange []. Trap1 plays a role in the TGF-beta/activin signaling pathway. It associates with inactive heteromeric TGF-beta and activin receptor complexes, mainly through the type II receptor, and is released upon activation of signaling [, ]. The precise function of this domain has not been characterised In Vps39 this domain is involved in localisation and in mediating the interactions with Vps11 [].
Probab=73.59 E-value=2.2 Score=36.60 Aligned_cols=42 Identities=31% Similarity=0.614 Sum_probs=30.0
Q ss_pred HHHHHHhhhhhhhcCcccccccCCcCeEEe---cCcccchhhhhc
Q psy2733 465 VNYLESKISEIEEMNTCTICMERCRNTIFL---CGHGTCDVCAKT 506 (644)
Q Consensus 465 ~~~l~~~~~~~~~~~~C~iC~~~~~~~~~~---CgH~~C~~C~~~ 506 (644)
+.+.++..-.+.+...|.+|.....+.+|. |||++...|+.+
T Consensus 65 l~~~~~~~v~i~~~~~C~vC~k~l~~~~f~~~p~~~v~H~~C~~r 109 (109)
T PF10367_consen 65 LVKLRSRSVVITESTKCSVCGKPLGNSVFVVFPCGHVVHYSCIKR 109 (109)
T ss_pred HHhhcCceEEECCCCCccCcCCcCCCceEEEeCCCeEEecccccC
Confidence 333444444556678999999888876665 999988888753
No 239
>KOG0825|consensus
Probab=72.94 E-value=2.2 Score=48.19 Aligned_cols=95 Identities=17% Similarity=0.291 Sum_probs=52.4
Q ss_pred ccccccccc---ccceEEecCCCccccchhhHHHh----hhhhccccceeeeeecCCCcc-CCCcccchhHHHH-HHH--
Q psy2733 399 VECAVCSEL---GVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRVTTDGRMV-PGIERCDKSKIER-VNY-- 467 (644)
Q Consensus 399 ~~C~iC~d~---~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~~~~g~~~-~~~~~~~~~~~~~-~~~-- 467 (644)
..|.+|.-. . ....-.+|+|. .|..|.... ..||+||....+.+..+.... .-....+...... ++.
T Consensus 124 ~~CP~Ci~s~~Dq-L~~~~k~c~H~-FC~~Ci~sWsR~aqTCPiDR~EF~~v~V~eS~~~~~~vR~lP~EEs~~~~e~~~ 201 (1134)
T KOG0825|consen 124 NQCPNCLKSCNDQ-LEESEKHTAHY-FCEECVGSWSRCAQTCPVDRGEFGEVKVLESTGIEANVRCLPSEESENILEKGG 201 (1134)
T ss_pred hhhhHHHHHHHHH-hhccccccccc-cHHHHhhhhhhhcccCchhhhhhheeeeeccccccceeEecchhhhhhhhhhcc
Confidence 346666531 1 12233489998 599998665 489999998888776543222 1011111111111 111
Q ss_pred --HH-HhhhhhhhcCcccccccCCcCeEEe-c
Q psy2733 468 --LE-SKISEIEEMNTCTICMERCRNTIFL-C 495 (644)
Q Consensus 468 --l~-~~~~~~~~~~~C~iC~~~~~~~~~~-C 495 (644)
-+ ......++..-|.||......-|++ |
T Consensus 202 d~~~d~~~~~~~E~~~C~IC~~~DpEdVLLLC 233 (1134)
T KOG0825|consen 202 DEKQDQISGLSQEEVKCDICTVHDPEDVLLLC 233 (1134)
T ss_pred ccccccccCcccccccceeeccCChHHhheee
Confidence 11 1223344557899999888777776 6
No 240
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0.
Probab=72.76 E-value=1.3 Score=39.04 Aligned_cols=42 Identities=31% Similarity=0.838 Sum_probs=35.3
Q ss_pred CcccccccCCcCeEEe-----cCcccchhhhhcC-------CCCccccccccce
Q psy2733 479 NTCTICMERCRNTIFL-----CGHGTCDVCAKTL-------KFCHMCRKLIEQR 520 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-----CgH~~C~~C~~~~-------~~Cp~Cr~~i~~~ 520 (644)
-+|-||.|.-.+..|+ ||=.+|.-|...+ ..||+|+...++.
T Consensus 81 YeCnIC~etS~ee~FLKPneCCgY~iCn~Cya~LWK~~~~ypvCPvCkTSFKss 134 (140)
T PF05290_consen 81 YECNICKETSAEERFLKPNECCGYSICNACYANLWKFCNLYPVCPVCKTSFKSS 134 (140)
T ss_pred eeccCcccccchhhcCCcccccchHHHHHHHHHHHHHcccCCCCCccccccccc
Confidence 5799999999999996 8888899997754 5899999877653
No 241
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=72.41 E-value=4.3 Score=40.06 Aligned_cols=44 Identities=39% Similarity=0.828 Sum_probs=29.0
Q ss_pred ccccccccc--------ccceEEecCCCccccchhhHHHhhhhhc--cccceeeee
Q psy2733 399 VECAVCSEL--------GVANVLLKPCNHAVACEECSSRMKKCIM--CKTFIEMRV 444 (644)
Q Consensus 399 ~~C~iC~d~--------~~~~v~~~PC~h~~~C~~C~~~~~~Cp~--Cr~~i~~~~ 444 (644)
..|..|.|. +-+.|.+ ||.-+.+|.+-++++ .||. |+..|.-.-
T Consensus 86 VkC~~CnEATPIr~aPpGKKYVRC-PCNCLLICk~sS~rI-aCPRp~CkRiI~L~~ 139 (256)
T PF09788_consen 86 VKCSVCNEATPIRNAPPGKKYVRC-PCNCLLICKSSSQRI-ACPRPNCKRIINLGP 139 (256)
T ss_pred EECCCCCccccccCCCCCCeeEec-CCceEEEeecccccc-cCCCCCCcceEEeCC
Confidence 458888874 2155666 888888877655443 5777 887775443
No 242
>COG5243 HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
Probab=71.61 E-value=1.8 Score=44.54 Aligned_cols=42 Identities=21% Similarity=0.551 Sum_probs=28.6
Q ss_pred cccccccccccce------------EEecCCCccccchhhHH----Hhhhhhcccccee
Q psy2733 399 VECAVCSELGVAN------------VLLKPCNHAVACEECSS----RMKKCIMCKTFIE 441 (644)
Q Consensus 399 ~~C~iC~d~~~~~------------v~~~PC~h~~~C~~C~~----~~~~Cp~Cr~~i~ 441 (644)
..|.||+|..... -.-.||||.. =-+|.+ +...||+||.++-
T Consensus 288 ~~C~ICmde~~h~~~~~~~~~~~~~pKrLpCGHil-Hl~CLknW~ERqQTCPICr~p~i 345 (491)
T COG5243 288 RTCTICMDEMFHPDHEPLPRGLDMTPKRLPCGHIL-HLHCLKNWLERQQTCPICRRPVI 345 (491)
T ss_pred CeEEEecccccCCCCccCcccccCCccccccccee-eHHHHHHHHHhccCCCcccCccc
Confidence 3599999861111 1345999985 467774 4468999999853
No 243
>KOG4362|consensus
Probab=70.59 E-value=2 Score=48.43 Aligned_cols=58 Identities=29% Similarity=0.669 Sum_probs=46.5
Q ss_pred HHHHHHHHhhhhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC-------CCCccccccccce
Q psy2733 463 ERVNYLESKISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-------KFCHMCRKLIEQR 520 (644)
Q Consensus 463 ~~~~~l~~~~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-------~~Cp~Cr~~i~~~ 520 (644)
..+....+.+..+.....|.||+......+.+ |-|.+|..|.... .+||+|+..+.++
T Consensus 6 ~~~~~~~~vi~~~~k~lEc~ic~~~~~~p~~~kc~~~~l~~~~n~~f~~~~~~~~~~lc~~~~eK~ 71 (684)
T KOG4362|consen 6 LKVREVAQVINAMQKILECPICLEHVKEPSLLKCDHIFLKFCLNKLFESKKGPKQCALCKSDIEKR 71 (684)
T ss_pred HHHHHHHhHHHHHhhhccCCceeEEeeccchhhhhHHHHhhhhhceeeccCccccchhhhhhhhhh
Confidence 44555556667777778899999999999888 9999999998742 4799999888764
No 244
>KOG3800|consensus
Probab=70.39 E-value=2 Score=42.96 Aligned_cols=42 Identities=24% Similarity=0.741 Sum_probs=30.9
Q ss_pred cccccccccc----ceEEecCCCccccchhhHHHhh-----hhhccccceee
Q psy2733 400 ECAVCSELGV----ANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d~~~----~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~ 442 (644)
.|.+|....+ -.....||+|.. |++|..++. .||.|.....+
T Consensus 2 ~Cp~CKt~~Y~np~lk~~in~C~H~l-CEsCvd~iF~~g~~~CpeC~~iLRk 52 (300)
T KOG3800|consen 2 ACPKCKTDRYLNPDLKLMINECGHRL-CESCVDRIFSLGPAQCPECMVILRK 52 (300)
T ss_pred CCcccccceecCccceeeeccccchH-HHHHHHHHHhcCCCCCCcccchhhh
Confidence 3777765322 223344999995 999999986 89999988876
No 245
>KOG4739|consensus
Probab=70.13 E-value=3.5 Score=40.36 Aligned_cols=52 Identities=21% Similarity=0.541 Sum_probs=36.0
Q ss_pred ccccccccccce-EEecCCCccccchhhHHHh--hhhhccccceeeeeecCCCccCC
Q psy2733 400 ECAVCSELGVAN-VLLKPCNHAVACEECSSRM--KKCIMCKTFIEMRVTTDGRMVPG 453 (644)
Q Consensus 400 ~C~iC~d~~~~~-v~~~PC~h~~~C~~C~~~~--~~Cp~Cr~~i~~~~~~~g~~~~~ 453 (644)
.|-.|.-.+... ..+--|+|+ .|+.|...- ..||.|+.. .+.++.++....+
T Consensus 5 hCn~C~~~~~~~~f~LTaC~Hv-fC~~C~k~~~~~~C~lCkk~-ir~i~l~~slp~~ 59 (233)
T KOG4739|consen 5 HCNKCFRFPSQDPFFLTACRHV-FCEPCLKASSPDVCPLCKKS-IRIIQLNRSLPTD 59 (233)
T ss_pred EeccccccCCCCceeeeechhh-hhhhhcccCCccccccccce-eeeeecccccchh
Confidence 466676544222 344489998 599999654 489999999 6777777764443
No 246
>KOG1814|consensus
Probab=69.95 E-value=4.2 Score=42.77 Aligned_cols=31 Identities=29% Similarity=0.790 Sum_probs=24.3
Q ss_pred ccccccccc--ccceEEecCCCccccchhhHHHh
Q psy2733 399 VECAVCSEL--GVANVLLKPCNHAVACEECSSRM 430 (644)
Q Consensus 399 ~~C~iC~d~--~~~~v~~~PC~h~~~C~~C~~~~ 430 (644)
..|.||.+. +.....+.||+|. .|.+|....
T Consensus 185 f~C~ICf~e~~G~~c~~~lpC~Hv-~Ck~C~kdY 217 (445)
T KOG1814|consen 185 FDCCICFEEQMGQHCFKFLPCSHV-FCKSCLKDY 217 (445)
T ss_pred ccceeeehhhcCcceeeecccchH-HHHHHHHHH
Confidence 469999985 4345777899998 599999664
No 247
>KOG3842|consensus
Probab=69.16 E-value=5.5 Score=40.23 Aligned_cols=62 Identities=18% Similarity=0.401 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHHhhhhhhhcCccccccc--------------CCcCeEEe-cCccc---chhhhh----cCCCCcccccc
Q psy2733 459 KSKIERVNYLESKISEIEEMNTCTICME--------------RCRNTIFL-CGHGT---CDVCAK----TLKFCHMCRKL 516 (644)
Q Consensus 459 ~~~~~~~~~l~~~~~~~~~~~~C~iC~~--------------~~~~~~~~-CgH~~---C~~C~~----~~~~Cp~Cr~~ 516 (644)
++....++.+.++++.-.. .|+|-+. ...-.|++ |||+- =-.|-+ +-++|||||..
T Consensus 273 sPt~k~lE~~~~~iNA~RP--QCPVglnTL~~P~~~~~~~~~~~QP~vYl~CGHV~G~H~WG~~e~~g~~~r~CPmC~~~ 350 (429)
T KOG3842|consen 273 SPTMKHLEALRQEINAARP--QCPVGLNTLAFPSKRRKRVVDEKQPWVYLNCGHVHGYHNWGVRENTGQRERECPMCRVV 350 (429)
T ss_pred CccHHHHHHHHHHHhccCC--CCCcccceeecccccccccccccCCeEEEeccccccccccccccccCcccCcCCeeeee
Confidence 4455666666666666555 4887763 33447889 99943 222333 34699999965
Q ss_pred ccceEEE
Q psy2733 517 IEQRINI 523 (644)
Q Consensus 517 i~~~~~~ 523 (644)
=. .|.+
T Consensus 351 gp-~V~L 356 (429)
T KOG3842|consen 351 GP-YVPL 356 (429)
T ss_pred cc-eeee
Confidence 43 4544
No 248
>KOG2177|consensus
Probab=67.36 E-value=2.3 Score=43.88 Aligned_cols=38 Identities=32% Similarity=0.838 Sum_probs=31.1
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh----hhhcccc
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMCKT 438 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~ 438 (644)
..|.||++..... ...||+|. .|..|..... .||.||.
T Consensus 14 ~~C~iC~~~~~~p-~~l~C~H~-~c~~C~~~~~~~~~~Cp~cr~ 55 (386)
T KOG2177|consen 14 LTCPICLEYFREP-VLLPCGHN-FCRACLTRSWEGPLSCPVCRP 55 (386)
T ss_pred ccChhhHHHhhcC-ccccccch-HhHHHHHHhcCCCcCCcccCC
Confidence 3599999976444 66799998 5999998875 8999993
No 249
>KOG3002|consensus
Probab=67.30 E-value=3.1 Score=42.79 Aligned_cols=42 Identities=24% Similarity=0.620 Sum_probs=30.4
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-hhhhcccccee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-KKCIMCKTFIE 441 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-~~Cp~Cr~~i~ 441 (644)
.+|.||.+....-+.--+=||++ |++|-.+. .+||.||.++.
T Consensus 49 leCPvC~~~l~~Pi~QC~nGHla-CssC~~~~~~~CP~Cr~~~g 91 (299)
T KOG3002|consen 49 LDCPVCFNPLSPPIFQCDNGHLA-CSSCRTKVSNKCPTCRLPIG 91 (299)
T ss_pred ccCchhhccCcccceecCCCcEe-hhhhhhhhcccCCccccccc
Confidence 57999998642222222557885 99999555 59999999986
No 250
>KOG2114|consensus
Probab=66.02 E-value=2.2 Score=48.78 Aligned_cols=43 Identities=23% Similarity=0.541 Sum_probs=30.1
Q ss_pred CcccccccCC-cC-eEEecCcccchhhhh-cCCCCccccccccceE
Q psy2733 479 NTCTICMERC-RN-TIFLCGHGTCDVCAK-TLKFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~-~~-~~~~CgH~~C~~C~~-~~~~Cp~Cr~~i~~~~ 521 (644)
..|..|-... .- +.|.|||.+-..|.+ ...+||-|+..-....
T Consensus 841 skCs~C~~~LdlP~VhF~CgHsyHqhC~e~~~~~CP~C~~e~~~~m 886 (933)
T KOG2114|consen 841 SKCSACEGTLDLPFVHFLCGHSYHQHCLEDKEDKCPKCLPELRGVM 886 (933)
T ss_pred eeecccCCccccceeeeecccHHHHHhhccCcccCCccchhhhhhH
Confidence 4799995332 22 444499998778877 4679999999555544
No 251
>PF05883 Baculo_RING: Baculovirus U-box/Ring-like domain; InterPro: IPR008573 This family consists of several Baculovirus proteins of around 130 residues in length. The function of this family is unknown, but it appears to be related to the U-box and ring finger domain by profile-profile comparison.
Probab=63.72 E-value=4.1 Score=36.28 Aligned_cols=43 Identities=28% Similarity=0.570 Sum_probs=30.9
Q ss_pred HHHHHHhhhhhhh--cCcccccccCCcC---eEEe-cC------cccchhhhhcC
Q psy2733 465 VNYLESKISEIEE--MNTCTICMERCRN---TIFL-CG------HGTCDVCAKTL 507 (644)
Q Consensus 465 ~~~l~~~~~~~~~--~~~C~iC~~~~~~---~~~~-Cg------H~~C~~C~~~~ 507 (644)
-..+..-+.+.-. ..+|.||++...+ +|.. || |++|.+|..+.
T Consensus 11 k~~l~~lf~~~w~~~~~EC~IC~~~I~~~~GvV~vt~~g~lnLEkmfc~~C~~rw 65 (134)
T PF05883_consen 11 KYYLERLFNDQWPRCTVECQICFDRIDNNDGVVYVTDGGTLNLEKMFCADCDKRW 65 (134)
T ss_pred HHHHHHHHHHHccccCeeehhhhhhhhcCCCEEEEecCCeehHHHHHHHHHHHHH
Confidence 3445555555444 5789999998877 6666 87 56799999976
No 252
>KOG4684|consensus
Probab=62.60 E-value=7.1 Score=37.21 Aligned_cols=48 Identities=31% Similarity=0.623 Sum_probs=31.4
Q ss_pred ccccccccc--------ccceEEecCCCccccchhhHHHhh-hhhccccceeeeeecC
Q psy2733 399 VECAVCSEL--------GVANVLLKPCNHAVACEECSSRMK-KCIMCKTFIEMRVTTD 447 (644)
Q Consensus 399 ~~C~iC~d~--------~~~~v~~~PC~h~~~C~~C~~~~~-~Cp~Cr~~i~~~~~~~ 447 (644)
..|..|.+. +-..|.+ ||.-+.+|..-++++- .=|.|+..|.-.--+.
T Consensus 101 VKC~~CnEATPIrnAPpGKKYVRC-PCNCLLICK~sSqRIACPRpnCkRiInL~p~~~ 157 (275)
T KOG4684|consen 101 VKCHSCNEATPIRNAPPGKKYVRC-PCNCLLICKASSQRIACPRPNCKRIINLDPLIE 157 (275)
T ss_pred EeecccCccccCCCCCCCCceeec-CCcEEEEEecccceeccCCCCcceeeecCCCCC
Confidence 458888874 2245666 9998888888777664 3456776665444333
No 253
>PF03854 zf-P11: P-11 zinc finger; InterPro: IPR003224 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The RING-finger is a specialised type of Zn-finger of 40 to 60 residues that binds two atoms of zinc, and is probably involved in mediating protein-protein interactions [, , ]. There are two different variants, the C3HC4-type and a C3H2C3-type, which is clearly related despite the different cysteine/histidine pattern. The latter type is sometimes referred to as 'RING-H2 finger'. The RING domain is a protein interaction domain which has been implicated in a range of diverse biological processes. Several 3D-structures for RING-fingers are known [, ]. The 3D structure of the zinc ligation system is unique to the RING domain and is referred to as the 'cross-brace' motif. The spacing of the cysteines in such a domain is: C-x(2)-C-x(9 to 39)-C-x(1 to 3)-H-x(2 to 3)-C-x(2)-C-x(4 to 48)-C-x(2)-C Metal ligand pairs one and three co-ordinate to bind one zinc ion, whilst pairs two and four bind the second. This entry represents RING finger protein Z, a small polypeptide found in some negative-strand RNA viruses including Lassa fever virus, which plays a crucial role in virion assembly and budding. RING finger Z has been shown to interact with several host proteins, including promyelocytic leukemia protein and the eukaryotic translation initiation factor 4E [, ]. It is sufficient in the absence of any other viral proteins to release virus-like particles from the infected cell []. This protein is also responsible for arenavirus superinfection exclusion; expression of this protein in a host cell strongly and specifically inhibits areanavirus transcription and replication []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003723 RNA binding, 0008270 zinc ion binding; PDB: 2KO5_A.
Probab=61.16 E-value=3.9 Score=29.14 Aligned_cols=41 Identities=27% Similarity=0.630 Sum_probs=22.0
Q ss_pred cccccccCCcCeEEecC-cccchhhhhcC----CCCccccccccceE
Q psy2733 480 TCTICMERCRNTIFLCG-HGTCDVCAKTL----KFCHMCRKLIEQRI 521 (644)
Q Consensus 480 ~C~iC~~~~~~~~~~Cg-H~~C~~C~~~~----~~Cp~Cr~~i~~~~ 521 (644)
.|.-|+-..+..+- |. |..|-.|...| ..||+|..++-.++
T Consensus 4 nCKsCWf~~k~Li~-C~dHYLCl~CLt~ml~~s~~C~iC~~~LPtki 49 (50)
T PF03854_consen 4 NCKSCWFANKGLIK-CSDHYLCLNCLTLMLSRSDRCPICGKPLPTKI 49 (50)
T ss_dssp ---SS-S--SSEEE--SS-EEEHHHHHHT-SSSSEETTTTEE----S
T ss_pred cChhhhhcCCCeee-ecchhHHHHHHHHHhccccCCCcccCcCcccc
Confidence 47777766554332 65 78899999965 58999999887655
No 254
>PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A. The small G protein Rab3A plays an important role in the regulation of neurotransmitter release. The crystal structure of the small G protein Rab3A complexed with the effector domain of rabphilin-3A shows that the effector domain of rabphilin-3A contacts Rab3A in two distinct areas. The first interface involves the Rab3A switch I and switch II regions, which are sensitive to the nucleotide-binding state of Rab3A. The second interface consists of a deep pocket in Rab3A that interacts with a SGAWFF structural element of rabphilin-3A. Sequence and structure analysis, and biochemical data suggest that this pocket, or Rab complementarity-determining region (RabCDR), establishes a specific interaction between each Rab protein and its effectors. It has been suggested that RabCDRs could be major determinants of effector specificity during vesicle trafficking and fusion [].; GO: 0008270 zinc ion binding, 0017137 Rab GTPase binding, 0006886 intracellular protein transport; PDB: 2CSZ_A 2ZET_C 1ZBD_B 3BC1_B 2CJS_C 2A20_A.
Probab=61.08 E-value=3.6 Score=36.14 Aligned_cols=58 Identities=24% Similarity=0.611 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHhhhh--hh----------hcCcccccccC-----CcCeEEe-cCcccchhhhhcC-----CCCccccc
Q psy2733 459 KSKIERVNYLESKISE--IE----------EMNTCTICMER-----CRNTIFL-CGHGTCDVCAKTL-----KFCHMCRK 515 (644)
Q Consensus 459 ~~~~~~~~~l~~~~~~--~~----------~~~~C~iC~~~-----~~~~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~ 515 (644)
+...+.+.+|+++++. .. .+..|.+|... ....+.. |+|.+|..|.... ..|.+|++
T Consensus 23 ~~E~~Ri~kLk~~L~~e~~r~~~~~~~~~~~~~~C~~C~~~fg~l~~~~~~C~~C~~~VC~~C~~~~~~~~~WlC~vC~k 102 (118)
T PF02318_consen 23 KKEEERIRKLKQELQKEKMRREALGNSQKYGERHCARCGKPFGFLFNRGRVCVDCKHRVCKKCGVYSKKEPIWLCKVCQK 102 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCSTTHCCSB-TTTS-BCSCTSTTCEEETTTTEEEETTSEEETSSSCCEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCcchhhhCCcccccCCCCCcCCcCCccccCccCCcCCCCCCEEChhhHH
Confidence 3344566666666621 11 34799999764 2345666 9999999998753 25888876
Q ss_pred c
Q psy2733 516 L 516 (644)
Q Consensus 516 ~ 516 (644)
.
T Consensus 103 ~ 103 (118)
T PF02318_consen 103 Q 103 (118)
T ss_dssp H
T ss_pred H
Confidence 4
No 255
>KOG1493|consensus
Probab=60.91 E-value=3.2 Score=32.77 Aligned_cols=39 Identities=23% Similarity=0.445 Sum_probs=25.9
Q ss_pred cccccccCCcCeE--Ee-cCcccchhhhhc-------CCCCcccccccc
Q psy2733 480 TCTICMERCRNTI--FL-CGHGTCDVCAKT-------LKFCHMCRKLIE 518 (644)
Q Consensus 480 ~C~iC~~~~~~~~--~~-CgH~~C~~C~~~-------~~~Cp~Cr~~i~ 518 (644)
.|+-|.-.--+.- +- |.|.+=.-|+.+ -..|||||+..+
T Consensus 33 ~Cp~Ck~PgDdCPLv~G~C~h~fh~hCI~~wl~~~tsq~~CPmcRq~~~ 81 (84)
T KOG1493|consen 33 CCPDCKLPGDDCPLVWGYCLHAFHAHCILKWLNTPTSQGQCPMCRQTWQ 81 (84)
T ss_pred cCCCCcCCCCCCccHHHHHHHHHHHHHHHHHhcCccccccCCcchheeE
Confidence 4555554444433 33 999888888773 248999998653
No 256
>KOG1645|consensus
Probab=60.91 E-value=3.5 Score=43.20 Aligned_cols=45 Identities=27% Similarity=0.589 Sum_probs=34.8
Q ss_pred hcCcccccccCC-----cCeEEe-cCcccchhhhhcC------CCCccccccccceE
Q psy2733 477 EMNTCTICMERC-----RNTIFL-CGHGTCDVCAKTL------KFCHMCRKLIEQRI 521 (644)
Q Consensus 477 ~~~~C~iC~~~~-----~~~~~~-CgH~~C~~C~~~~------~~Cp~Cr~~i~~~~ 521 (644)
....|+||+|.- -.++.. |||.|=..|.++. ..||.|...-.+++
T Consensus 3 ~g~tcpiclds~~~~g~hr~vsl~cghlFgs~cie~wl~k~~~~~cp~c~~katkr~ 59 (463)
T KOG1645|consen 3 CGTTCPICLDSYTTAGNHRIVSLQCGHLFGSQCIEKWLGKKTKMQCPLCSGKATKRQ 59 (463)
T ss_pred ccccCceeeeeeeecCceEEeeecccccccHHHHHHHHhhhhhhhCcccCChhHHHH
Confidence 346899999753 346677 9999999999853 58999998777654
No 257
>KOG4628|consensus
Probab=60.60 E-value=4.3 Score=42.34 Aligned_cols=46 Identities=28% Similarity=0.540 Sum_probs=30.5
Q ss_pred cccccccc--ccceEEecCCCcc--ccchhhHHH-hh-hhhccccceeeeee
Q psy2733 400 ECAVCSEL--GVANVLLKPCNHA--VACEECSSR-MK-KCIMCKTFIEMRVT 445 (644)
Q Consensus 400 ~C~iC~d~--~~~~v~~~PC~h~--~~C~~C~~~-~~-~Cp~Cr~~i~~~~~ 445 (644)
.|.||+|. .-..+...||.|. +.|-.=+=. -| .||+|+..|.+...
T Consensus 231 ~CaIClEdY~~GdklRiLPC~H~FH~~CIDpWL~~~r~~CPvCK~di~~~~~ 282 (348)
T KOG4628|consen 231 TCAICLEDYEKGDKLRILPCSHKFHVNCIDPWLTQTRTFCPVCKRDIRTDSG 282 (348)
T ss_pred eEEEeecccccCCeeeEecCCCchhhccchhhHhhcCccCCCCCCcCCCCCC
Confidence 59999985 2255667799987 344444322 23 59999997766443
No 258
>KOG3800|consensus
Probab=58.59 E-value=4.5 Score=40.63 Aligned_cols=40 Identities=23% Similarity=0.762 Sum_probs=28.6
Q ss_pred cccccccC---CcCeEEe---cCcccchhhhhcC-----CCCccccccccc
Q psy2733 480 TCTICMER---CRNTIFL---CGHGTCDVCAKTL-----KFCHMCRKLIEQ 519 (644)
Q Consensus 480 ~C~iC~~~---~~~~~~~---CgH~~C~~C~~~~-----~~Cp~Cr~~i~~ 519 (644)
.|++|... ..+++++ |||..|.+|..++ -.||-|-+...+
T Consensus 2 ~Cp~CKt~~Y~np~lk~~in~C~H~lCEsCvd~iF~~g~~~CpeC~~iLRk 52 (300)
T KOG3800|consen 2 ACPKCKTDRYLNPDLKLMINECGHRLCESCVDRIFSLGPAQCPECMVILRK 52 (300)
T ss_pred CCcccccceecCccceeeeccccchHHHHHHHHHHhcCCCCCCcccchhhh
Confidence 37777543 3344444 9999999999976 489999876654
No 259
>KOG3039|consensus
Probab=58.52 E-value=7.5 Score=37.97 Aligned_cols=48 Identities=19% Similarity=0.315 Sum_probs=37.6
Q ss_pred cccccccccc---ccceEEecCCCccccchhhHHHhh----hhhccccceeeeeec
Q psy2733 398 PVECAVCSEL---GVANVLLKPCNHAVACEECSSRMK----KCIMCKTFIEMRVTT 446 (644)
Q Consensus 398 ~~~C~iC~d~---~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~~~~~ 446 (644)
+..|.||.|. ....+.+.||||.+ |.+|..++- .||+|..+...+-.+
T Consensus 221 ryiCpvtrd~LtNt~~ca~Lr~sg~Vv-~~ecvEklir~D~v~pv~d~plkdrdiI 275 (303)
T KOG3039|consen 221 RYICPVTRDTLTNTTPCAVLRPSGHVV-TKECVEKLIRKDMVDPVTDKPLKDRDII 275 (303)
T ss_pred ceecccchhhhcCccceEEeccCCcEe-eHHHHHHhccccccccCCCCcCcccceE
Confidence 3569999874 33567888999985 899998873 799999999885443
No 260
>PF11793 FANCL_C: FANCL C-terminal domain; PDB: 3K1L_A.
Probab=57.48 E-value=3.6 Score=32.49 Aligned_cols=41 Identities=20% Similarity=0.398 Sum_probs=16.8
Q ss_pred CcccccccCCc-C---eEEecC-----cccchhhhhc-----------C----CCCccccccccc
Q psy2733 479 NTCTICMERCR-N---TIFLCG-----HGTCDVCAKT-----------L----KFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~-~---~~~~Cg-----H~~C~~C~~~-----------~----~~Cp~Cr~~i~~ 519 (644)
..|.||++..- + ....|. +.+=..|... + .+||.|+.+|+-
T Consensus 3 ~~C~IC~~~~~~~~~~p~~~C~n~~C~~~fH~~CL~~wf~~~~~~~~~~~~~~G~CP~C~~~i~~ 67 (70)
T PF11793_consen 3 LECGICYSYRLDDGEIPDVVCPNPSCGKKFHLLCLSEWFLSLEKSRQSFIPIFGECPYCSSPISW 67 (70)
T ss_dssp -S-SSS--SS-TT-----B--S-TT----B-SGGGHHHHHHHHSSS-TTT--EEE-TTT-SEEEG
T ss_pred CCCCcCCcEecCCCCcCceEcCCcccCCHHHHHHHHHHHHHcccCCeeecccccCCcCCCCeeeE
Confidence 46999998654 2 122254 3334456441 1 269999999874
No 261
>PF04641 Rtf2: Rtf2 RING-finger
Probab=57.03 E-value=12 Score=37.89 Aligned_cols=43 Identities=26% Similarity=0.462 Sum_probs=33.7
Q ss_pred ccccccccc---ccceEEecCCCccccchhhHHHhh---hhhccccceee
Q psy2733 399 VECAVCSEL---GVANVLLKPCNHAVACEECSSRMK---KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~---~~~~v~~~PC~h~~~C~~C~~~~~---~Cp~Cr~~i~~ 442 (644)
..|.|.... .+.-+.+.||||. +++.+...++ .||.|..+...
T Consensus 114 ~~CPvt~~~~~~~~~fv~l~~cG~V-~s~~alke~k~~~~Cp~c~~~f~~ 162 (260)
T PF04641_consen 114 FICPVTGKEFNGKHKFVYLRPCGCV-FSEKALKELKKSKKCPVCGKPFTE 162 (260)
T ss_pred eECCCCCcccCCceeEEEEcCCCCE-eeHHHHHhhcccccccccCCcccc
Confidence 457777643 2356778899997 5899999998 89999999765
No 262
>KOG1039|consensus
Probab=56.33 E-value=5.3 Score=41.81 Aligned_cols=51 Identities=24% Similarity=0.509 Sum_probs=37.8
Q ss_pred cccccccccccccceE----Ee---cCCCccccchhhHHH-----------hhhhhccccceeeeeecCC
Q psy2733 397 VPVECAVCSELGVANV----LL---KPCNHAVACEECSSR-----------MKKCIMCKTFIEMRVTTDG 448 (644)
Q Consensus 397 ~~~~C~iC~d~~~~~v----~~---~PC~h~~~C~~C~~~-----------~~~Cp~Cr~~i~~~~~~~g 448 (644)
...+|.||++.....+ .+ -+|.|. .|-.|..+ .+.||+||...+..+....
T Consensus 160 ~~k~CGICme~i~ek~~~~~rfgilpnC~H~-~Cl~Cir~wr~~~q~~~~~sksCP~CRv~s~~v~pS~~ 228 (344)
T KOG1039|consen 160 SEKECGICMETINEKAASERRFGILPNCNHS-FCLNCIRKWRQATQFESKTSKSCPFCRVPSSFVNPSSF 228 (344)
T ss_pred ccccceehhhhccccchhhhhcccCCCcchh-hhhcHhHhhhhhhccccccccCCCcccCccccccccce
Confidence 3467999999753433 12 369998 59999844 3589999999999887765
No 263
>KOG2231|consensus
Probab=56.19 E-value=6.3 Score=44.65 Aligned_cols=42 Identities=31% Similarity=0.687 Sum_probs=34.5
Q ss_pred cccccccCCcCeEEe-cCc-ccchhhhhcC----------CCCccccccccceE
Q psy2733 480 TCTICMERCRNTIFL-CGH-GTCDVCAKTL----------KFCHMCRKLIEQRI 521 (644)
Q Consensus 480 ~C~iC~~~~~~~~~~-CgH-~~C~~C~~~~----------~~Cp~Cr~~i~~~~ 521 (644)
.|.||-....-.... ||| .+|..|..++ ..||.||..+....
T Consensus 2 ~c~ic~~s~~~~~~~s~~h~~v~~~~~~R~~~~~~~~~~~~~~~vcr~~~~~~s 55 (669)
T KOG2231|consen 2 SCAICAFSPDFVGRGSCGHNEVCATCVVRLRFELNNRKCSNECPVCRREVETKS 55 (669)
T ss_pred CcceeecCccccccccccccccchhhhhhhhhhcccccccccCcccccceeeec
Confidence 599999999888888 999 8899999865 25799998776543
No 264
>COG5219 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=56.07 E-value=5.4 Score=46.15 Aligned_cols=41 Identities=22% Similarity=0.471 Sum_probs=28.3
Q ss_pred CcccccccCCc-------CeEEe-cCcccchhhhh------cCCCCccccccccc
Q psy2733 479 NTCTICMERCR-------NTIFL-CGHGTCDVCAK------TLKFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~-------~~~~~-CgH~~C~~C~~------~~~~Cp~Cr~~i~~ 519 (644)
.+|.||+.... +-... |.|.+-..|.- .-..||+||..|+-
T Consensus 1470 eECaICYsvL~~vdr~lPskrC~TCknKFH~~CLyKWf~Ss~~s~CPlCRseitf 1524 (1525)
T COG5219 1470 EECAICYSVLDMVDRSLPSKRCATCKNKFHTRCLYKWFASSARSNCPLCRSEITF 1524 (1525)
T ss_pred chhhHHHHHHHHHhccCCccccchhhhhhhHHHHHHHHHhcCCCCCCcccccccc
Confidence 68999975322 33344 77877777754 34689999988763
No 265
>KOG0802|consensus
Probab=55.75 E-value=4.5 Score=45.65 Aligned_cols=43 Identities=23% Similarity=0.481 Sum_probs=32.9
Q ss_pred cccccccccccce----EEecCCCccccchhhHHH----hhhhhccccceee
Q psy2733 399 VECAVCSELGVAN----VLLKPCNHAVACEECSSR----MKKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~----v~~~PC~h~~~C~~C~~~----~~~Cp~Cr~~i~~ 442 (644)
..|.||.|..... ....||+|. .+.+|... ...||.||..+..
T Consensus 292 ~~C~IC~e~l~~~~~~~~~rL~C~Hi-fh~~CL~~W~er~qtCP~CR~~~~~ 342 (543)
T KOG0802|consen 292 ELCIICLEELHSGHNITPKRLPCGHI-FHDSCLRSWFERQQTCPTCRTVLYD 342 (543)
T ss_pred Ceeeeechhhccccccccceeecccc-hHHHHHHHHHHHhCcCCcchhhhhc
Confidence 4599999976443 566799998 58999955 3589999995544
No 266
>PHA03096 p28-like protein; Provisional
Probab=55.01 E-value=7.9 Score=39.54 Aligned_cols=27 Identities=30% Similarity=0.570 Sum_probs=21.8
Q ss_pred CcccccccCCcC--------eEEe-cCcccchhhhh
Q psy2733 479 NTCTICMERCRN--------TIFL-CGHGTCDVCAK 505 (644)
Q Consensus 479 ~~C~iC~~~~~~--------~~~~-CgH~~C~~C~~ 505 (644)
..|.||++.... -.+. |-|.+|..|..
T Consensus 179 k~c~ic~e~~~~k~~~~~~fgil~~c~h~fc~~ci~ 214 (284)
T PHA03096 179 KICGICLENIKAKYIIKKYYGILSEIKHEFNIFCIK 214 (284)
T ss_pred hhcccchhhhhhhccccccccccccCCcHHHHHHHH
Confidence 679999987652 3445 99999999988
No 267
>PF10235 Cript: Microtubule-associated protein CRIPT; InterPro: IPR019367 The CRIPT protein is a cytoskeletal protein involved in microtubule production. This C-terminal domain is essential for binding to the PDZ3 domain of the SAP90 protein, one of a super-family of PDZ-containing proteins that play an important role in coupling the membrane ion channels with their signalling partners [].
Probab=54.38 E-value=7.5 Score=32.15 Aligned_cols=37 Identities=32% Similarity=0.759 Sum_probs=30.2
Q ss_pred CcccccccCCcCeEEecCcccchhhhhcCCCCccccccccc
Q psy2733 479 NTCTICMERCRNTIFLCGHGTCDVCAKTLKFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~CgH~~C~~C~~~~~~Cp~Cr~~i~~ 519 (644)
..|.||-...-.. ||-+|..|+=.-..|.||-+.|..
T Consensus 45 ~~C~~CK~~v~q~----g~~YCq~CAYkkGiCamCGKki~d 81 (90)
T PF10235_consen 45 SKCKICKTKVHQP----GAKYCQTCAYKKGICAMCGKKILD 81 (90)
T ss_pred ccccccccccccC----CCccChhhhcccCcccccCCeecc
Confidence 4699997765443 778899999999999999999854
No 268
>KOG4159|consensus
Probab=54.17 E-value=4.7 Score=43.10 Aligned_cols=45 Identities=33% Similarity=0.741 Sum_probs=35.6
Q ss_pred CcccccccccccccceEEecCCCccccchhhHHH----hhhhhccccceee
Q psy2733 396 NVPVECAVCSELGVANVLLKPCNHAVACEECSSR----MKKCIMCKTFIEM 442 (644)
Q Consensus 396 ~~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~----~~~Cp~Cr~~i~~ 442 (644)
.+..+|.||++....-+.. ||||. .|..|..+ -..||.||..+.+
T Consensus 82 ~sef~c~vc~~~l~~pv~t-pcghs-~c~~Cl~r~ld~~~~cp~Cr~~l~e 130 (398)
T KOG4159|consen 82 RSEFECCVCSRALYPPVVT-PCGHS-FCLECLDRSLDQETECPLCRDELVE 130 (398)
T ss_pred cchhhhhhhHhhcCCCccc-ccccc-ccHHHHHHHhccCCCCccccccccc
Confidence 3446799999987666676 99998 59999544 3489999999886
No 269
>PF02891 zf-MIZ: MIZ/SP-RING zinc finger; InterPro: IPR004181 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents MIZ-type zinc finger domains. Miz1 (Msx-interacting-zinc finger) is a zinc finger-containing protein with homology to the yeast protein, Nfi-1. Miz1 is a sequence specific DNA binding protein that can function as a positive-acting transcription factor. Miz1 binds to the homeobox protein Msx2, enhancing the specific DNA-binding ability of Msx2 []. Other proteins containing this domain include the human pias family (protein inhibitor of activated STAT protein). More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 3I2D_A.
Probab=51.71 E-value=10 Score=27.73 Aligned_cols=38 Identities=24% Similarity=0.415 Sum_probs=18.3
Q ss_pred CcccccccCCcCeEEe--cCcccchhhhh--------cCCCCcccccc
Q psy2733 479 NTCTICMERCRNTIFL--CGHGTCDVCAK--------TLKFCHMCRKL 516 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~--CgH~~C~~C~~--------~~~~Cp~Cr~~ 516 (644)
..|+|.+.+....+-. |.|.-|.+=.. ...+||+|.++
T Consensus 3 L~CPls~~~i~~P~Rg~~C~H~~CFDl~~fl~~~~~~~~W~CPiC~~~ 50 (50)
T PF02891_consen 3 LRCPLSFQRIRIPVRGKNCKHLQCFDLESFLESNQRTPKWKCPICNKP 50 (50)
T ss_dssp SB-TTTSSB-SSEEEETT--SS--EEHHHHHHHHHHS---B-TTT---
T ss_pred eeCCCCCCEEEeCccCCcCcccceECHHHHHHHhhccCCeECcCCcCc
Confidence 3588998888887776 99966654322 23589999875
No 270
>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function. The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.
Probab=51.05 E-value=16 Score=33.54 Aligned_cols=15 Identities=13% Similarity=0.439 Sum_probs=13.1
Q ss_pred hhhccccceeeeeec
Q psy2733 432 KCIMCKTFIEMRVTT 446 (644)
Q Consensus 432 ~Cp~Cr~~i~~~~~~ 446 (644)
.||+||..|..++.+
T Consensus 82 ~CPLCRG~V~GWtvv 96 (162)
T PF07800_consen 82 ACPLCRGEVKGWTVV 96 (162)
T ss_pred cCccccCceeceEEc
Confidence 599999999998765
No 271
>smart00744 RINGv The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity. The RING-variant domain is reminiscent of both the RING and the PHD domains and may represent an evolutionary intermediate. To describe this domain the term PHD/LAP domain has been used in the past. Extended description: The RING-variant (RINGv) domain contains a C4HC3 zinc-finger-like motif similar to the PHD domain, while some of the spacing between the Cys/His residues follow a pattern somewhat closer to that found in the RING domain. The RINGv domain, similar to the RING, PHD and LIM domains, is thought to bind two zinc ions co-ordinated by the highly conserved Cys and His residues. RING variant domain: C-x (2) -C-x(10-45)-C-x (1) -C-x (7) -H-x(2)-C-x(11-25)-C-x(2)-C As opposed to a PHD: C-x(1-2) -C-x (7-13)-C-x(2-4)-C-x(4-5)-H-x(2)-C-x(10-21)-C-x(2)-C Class
Probab=50.05 E-value=15 Score=26.72 Aligned_cols=35 Identities=23% Similarity=0.658 Sum_probs=24.0
Q ss_pred ccccccc--CCcCeEEe-cC-----cccchhhhhc------CCCCcccc
Q psy2733 480 TCTICME--RCRNTIFL-CG-----HGTCDVCAKT------LKFCHMCR 514 (644)
Q Consensus 480 ~C~iC~~--~~~~~~~~-Cg-----H~~C~~C~~~------~~~Cp~Cr 514 (644)
.|.||++ ...+.... |. |.+=..|..+ -..||+|.
T Consensus 1 ~CrIC~~~~~~~~~l~~PC~C~G~~~~vH~~Cl~~W~~~~~~~~C~iC~ 49 (49)
T smart00744 1 ICRICHDEGDEGDPLVSPCRCKGSLKYVHQECLERWINESGNKTCEICK 49 (49)
T ss_pred CccCCCCCCCCCCeeEeccccCCchhHHHHHHHHHHHHHcCCCcCCCCC
Confidence 4899997 44555555 74 5667778773 24799995
No 272
>KOG3799|consensus
Probab=49.61 E-value=11 Score=33.27 Aligned_cols=19 Identities=47% Similarity=1.010 Sum_probs=13.8
Q ss_pred hhcCcccccccCCcCeEEe--cCcc
Q psy2733 476 EEMNTCTICMERCRNTIFL--CGHG 498 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~--CgH~ 498 (644)
+++..|-||+. .-|. |||.
T Consensus 63 ~ddatC~IC~K----TKFADG~GH~ 83 (169)
T KOG3799|consen 63 GDDATCGICHK----TKFADGCGHN 83 (169)
T ss_pred CcCcchhhhhh----cccccccCcc
Confidence 34579999985 4466 9993
No 273
>KOG0827|consensus
Probab=48.98 E-value=8.8 Score=40.06 Aligned_cols=41 Identities=27% Similarity=0.637 Sum_probs=28.0
Q ss_pred cccccccCCcC---eEEe--cCcccchhhhhc-------CCCCccccccccce
Q psy2733 480 TCTICMERCRN---TIFL--CGHGTCDVCAKT-------LKFCHMCRKLIEQR 520 (644)
Q Consensus 480 ~C~iC~~~~~~---~~~~--CgH~~C~~C~~~-------~~~Cp~Cr~~i~~~ 520 (644)
.|.||-+-... ..-+ |||.|=..|... -+.||+||-....+
T Consensus 6 ~C~Ic~d~~p~~~~l~~i~~cGhifh~~cl~qwfe~~Ps~R~cpic~ik~~~r 58 (465)
T KOG0827|consen 6 ECHICIDGRPNDHELGPIGTCGHIFHTTCLTQWFEGDPSNRGCPICQIKLQER 58 (465)
T ss_pred eeeEeccCCccccccccccchhhHHHHHHHHHHHccCCccCCCCceeecccce
Confidence 69999654433 3333 999998888762 26899999554443
No 274
>KOG3842|consensus
Probab=48.55 E-value=9.3 Score=38.65 Aligned_cols=36 Identities=25% Similarity=0.590 Sum_probs=25.1
Q ss_pred cccccceEEecCCCccccchhhHHHhh--------------hhhccccceee
Q psy2733 405 SELGVANVLLKPCNHAVACEECSSRMK--------------KCIMCKTFIEM 442 (644)
Q Consensus 405 ~d~~~~~v~~~PC~h~~~C~~C~~~~~--------------~Cp~Cr~~i~~ 442 (644)
.|.+.....|.||||+ |++-....+ .||+|...+..
T Consensus 366 vD~G~pthaF~PCGHv--~sekt~~YWs~iplPhGT~~f~a~CPFC~~~L~g 415 (429)
T KOG3842|consen 366 VDAGPPTHAFNPCGHV--CSEKTVKYWSQIPLPHGTHAFHAACPFCATQLAG 415 (429)
T ss_pred ecCCCcccccCCcccc--cchhhhhHhhcCcCCCccccccccCcchhhhhcc
Confidence 3445577888999997 555554432 69999987754
No 275
>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length. This family contains a number of conserved cysteine residues and its function is unknown.
Probab=48.53 E-value=12 Score=27.80 Aligned_cols=30 Identities=27% Similarity=0.723 Sum_probs=23.5
Q ss_pred eEEecCc--ccchhhhhcC--CCCccccccccce
Q psy2733 491 TIFLCGH--GTCDVCAKTL--KFCHMCRKLIEQR 520 (644)
Q Consensus 491 ~~~~CgH--~~C~~C~~~~--~~Cp~Cr~~i~~~ 520 (644)
-+++|.+ .||..|++.+ ..||.|......+
T Consensus 21 ~A~ICSfECTFC~~C~e~~l~~~CPNCgGelv~R 54 (57)
T PF06906_consen 21 EAYICSFECTFCADCAETMLNGVCPNCGGELVRR 54 (57)
T ss_pred cceEEeEeCcccHHHHHHHhcCcCcCCCCccccC
Confidence 3566998 5699999987 6899998776543
No 276
>KOG4445|consensus
Probab=45.81 E-value=5.9 Score=39.82 Aligned_cols=43 Identities=26% Similarity=0.543 Sum_probs=26.3
Q ss_pred CcccccccCCcC---eEEe-cCcccchhhhh--------cC-------------------CCCccccccccceE
Q psy2733 479 NTCTICMERCRN---TIFL-CGHGTCDVCAK--------TL-------------------KFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~~~---~~~~-CgH~~C~~C~~--------~~-------------------~~Cp~Cr~~i~~~~ 521 (644)
..|+||+=-..+ ...+ |-|.+=..|.. .+ .-||+||..|.--.
T Consensus 116 gqCvICLygfa~~~~ft~T~C~Hy~H~~ClaRyl~~~~~~lrqe~q~~~~~~qh~~~~~eavcpVcre~i~~e~ 189 (368)
T KOG4445|consen 116 GQCVICLYGFASSPAFTVTACDHYMHFACLARYLTECLTGLRQEIQDAQKERQHMKEQVEAVCPVCRERIKIEE 189 (368)
T ss_pred CceEEEEEeecCCCceeeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhhhhHhhhhccccc
Confidence 678888754444 3344 99965334432 11 13999999997643
No 277
>KOG4218|consensus
Probab=43.85 E-value=12 Score=38.37 Aligned_cols=25 Identities=24% Similarity=0.700 Sum_probs=17.1
Q ss_pred cCcccccccCCcCeEEecCcccchhhh
Q psy2733 478 MNTCTICMERCRNTIFLCGHGTCDVCA 504 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~CgH~~C~~C~ 504 (644)
...|+||-|++....+ |-..|++|.
T Consensus 15 ~ElCPVCGDkVSGYHY--GLLTCESCK 39 (475)
T KOG4218|consen 15 GELCPVCGDKVSGYHY--GLLTCESCK 39 (475)
T ss_pred ccccccccCcccccee--eeeehhhhh
Confidence 3579999999986555 334466663
No 278
>KOG2817|consensus
Probab=43.75 E-value=13 Score=39.23 Aligned_cols=30 Identities=20% Similarity=0.353 Sum_probs=21.7
Q ss_pred cCeEEecCcccchhhhhcC-------CCCcccccccc
Q psy2733 489 RNTIFLCGHGTCDVCAKTL-------KFCHMCRKLIE 518 (644)
Q Consensus 489 ~~~~~~CgH~~C~~C~~~~-------~~Cp~Cr~~i~ 518 (644)
.-+.+.|||++|.+=..++ -+||.|.....
T Consensus 349 PPm~L~CGHVISkdAlnrLS~ng~~sfKCPYCP~e~~ 385 (394)
T KOG2817|consen 349 PPMMLICGHVISKDALNRLSKNGSQSFKCPYCPVEQL 385 (394)
T ss_pred CCeeeeccceecHHHHHHHhhCCCeeeeCCCCCcccC
Confidence 3355559999998887754 27999986543
No 279
>KOG2932|consensus
Probab=43.49 E-value=6 Score=39.94 Aligned_cols=44 Identities=25% Similarity=0.495 Sum_probs=29.9
Q ss_pred ccccccccccceEEecCCCccccchhhHHH--hhhhhccccceeeee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSR--MKKCIMCKTFIEMRV 444 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~--~~~Cp~Cr~~i~~~~ 444 (644)
.|.-|--...-.-.+.||.|. .|-+|+.. .|.||.|-..|.+.-
T Consensus 92 fCd~Cd~PI~IYGRmIPCkHv-FCl~CAr~~~dK~Cp~C~d~VqrIe 137 (389)
T KOG2932|consen 92 FCDRCDFPIAIYGRMIPCKHV-FCLECARSDSDKICPLCDDRVQRIE 137 (389)
T ss_pred eecccCCcceeeecccccchh-hhhhhhhcCccccCcCcccHHHHHH
Confidence 366664333233566799997 69999954 579999986664433
No 280
>COG5220 TFB3 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
Probab=43.11 E-value=6.9 Score=37.96 Aligned_cols=42 Identities=31% Similarity=0.850 Sum_probs=30.4
Q ss_pred cccccccccc----ceEEecC-CCccccchhhHHHhh-----hhh--ccccceee
Q psy2733 400 ECAVCSELGV----ANVLLKP-CNHAVACEECSSRMK-----KCI--MCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d~~~----~~v~~~P-C~h~~~C~~C~~~~~-----~Cp--~Cr~~i~~ 442 (644)
.|.+|....+ -.++..| |-|.. |++|..++. .|| -|...+.+
T Consensus 12 ~CPvCksDrYLnPdik~linPECyHrm-CESCvdRIFs~GpAqCP~~gC~kILRK 65 (314)
T COG5220 12 RCPVCKSDRYLNPDIKILINPECYHRM-CESCVDRIFSRGPAQCPYKGCGKILRK 65 (314)
T ss_pred cCCccccccccCCCeEEEECHHHHHHH-HHHHHHHHhcCCCCCCCCccHHHHHHH
Confidence 4999986421 2345568 99995 999999984 899 78765554
No 281
>PF04710 Pellino: Pellino; InterPro: IPR006800 Pellino is involved in Toll-like signalling pathways, and associates with the kinase domain of the Pelle Ser/Thr kinase [, , ].; PDB: 3EGB_B 3EGA_A.
Probab=42.49 E-value=8.3 Score=40.57 Aligned_cols=48 Identities=27% Similarity=0.561 Sum_probs=0.0
Q ss_pred cCccccccc-------------------CCcCeEEe-cCcccchhhhh-----cC--------CCCccccccccceEEEE
Q psy2733 478 MNTCTICME-------------------RCRNTIFL-CGHGTCDVCAK-----TL--------KFCHMCRKLIEQRINIS 524 (644)
Q Consensus 478 ~~~C~iC~~-------------------~~~~~~~~-CgH~~C~~C~~-----~~--------~~Cp~Cr~~i~~~~~~~ 524 (644)
++.|++|.. .+..-+|. |||++=...+. .+ ..||+|-.++.......
T Consensus 328 ~r~CPlCr~~g~~V~L~mG~E~afyvD~~~pthaF~PCGHv~SekTa~yWs~i~lPhGt~~f~a~CPFCa~~L~g~~g~v 407 (416)
T PF04710_consen 328 SRTCPLCRQVGPYVPLWMGCEPAFYVDSGPPTHAFNPCGHVCSEKTAKYWSQIPLPHGTHAFHAACPFCATPLDGEQGYV 407 (416)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCccccCCceeEeeccccceeecCCCCceeecccccccchhhhhhhhcCCCCCCcccccccCCcccCcccCCCCce
Confidence 567999973 34667899 99986444444 12 36999999998754333
Q ss_pred E
Q psy2733 525 R 525 (644)
Q Consensus 525 ~ 525 (644)
|
T Consensus 408 r 408 (416)
T PF04710_consen 408 R 408 (416)
T ss_dssp -
T ss_pred E
Confidence 4
No 282
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0.
Probab=42.39 E-value=14 Score=32.76 Aligned_cols=43 Identities=33% Similarity=0.757 Sum_probs=33.5
Q ss_pred cccccccccccccceEEecC---CCccccchhhHHHhh-------hhhccccce
Q psy2733 397 VPVECAVCSELGVANVLLKP---CNHAVACEECSSRMK-------KCIMCKTFI 440 (644)
Q Consensus 397 ~~~~C~iC~d~~~~~v~~~P---C~h~~~C~~C~~~~~-------~Cp~Cr~~i 440 (644)
...+|-||.|.......++| || ..+|-.|-..++ .||.|+..-
T Consensus 79 ~lYeCnIC~etS~ee~FLKPneCCg-Y~iCn~Cya~LWK~~~~ypvCPvCkTSF 131 (140)
T PF05290_consen 79 KLYECNICKETSAEERFLKPNECCG-YSICNACYANLWKFCNLYPVCPVCKTSF 131 (140)
T ss_pred CceeccCcccccchhhcCCcccccc-hHHHHHHHHHHHHHcccCCCCCcccccc
Confidence 34789999998756666666 55 667999998886 799999655
No 283
>KOG1815|consensus
Probab=42.27 E-value=37 Score=37.30 Aligned_cols=31 Identities=26% Similarity=0.665 Sum_probs=23.7
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM 430 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~ 430 (644)
..|.+|.+.........+|+|.. |..|....
T Consensus 71 ~~c~ic~~~~~~~~~~~~c~H~~-c~~cw~~y 101 (444)
T KOG1815|consen 71 VQCGICVESYDGEIIGLGCGHPF-CPPCWTGY 101 (444)
T ss_pred ccCCcccCCCcchhhhcCCCcHH-HHHHHHHH
Confidence 56999998763346777999984 89999663
No 284
>KOG3241|consensus
Probab=42.12 E-value=0.42 Score=43.82 Aligned_cols=64 Identities=31% Similarity=0.619 Sum_probs=46.8
Q ss_pred hhhccccceeeeeecCCCccCCCcccchhHHHHHHHHHHhhhhhhhcCcccccccCCcCeEEecCcccchhhhhcCCCCc
Q psy2733 432 KCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISEIEEMNTCTICMERCRNTIFLCGHGTCDVCAKTLKFCH 511 (644)
Q Consensus 432 ~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~C~iC~~~~~~~~~~CgH~~C~~C~~~~~~Cp 511 (644)
.|-.|+.+|+=++... +-..+.+...|.-|..+...-.+ |.+|..|+....-|.
T Consensus 44 VCqRCkEqieWk~KY~-----------------------KYKpLt~akkC~kC~~r~Vk~aY---H~~Cr~CA~e~~vCA 97 (227)
T KOG3241|consen 44 VCQRCKEQIEWKRKYG-----------------------KYKPLTEAKKCQKCTKRNVKQAY---HKLCRGCAKEQKVCA 97 (227)
T ss_pred HHHHHHHHHHHHHHhc-----------------------cccccchhHHHHHHHHHHHHHHH---HHhcccHHHHHHHHH
Confidence 5777777777766655 34455666778888877654443 888999999999999
Q ss_pred cccccccceE
Q psy2733 512 MCRKLIEQRI 521 (644)
Q Consensus 512 ~Cr~~i~~~~ 521 (644)
.|-+.++..+
T Consensus 98 KC~ks~~~i~ 107 (227)
T KOG3241|consen 98 KCCKSVDQIL 107 (227)
T ss_pred HHhccHHHhh
Confidence 9988776543
No 285
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=41.47 E-value=14 Score=42.28 Aligned_cols=42 Identities=24% Similarity=0.567 Sum_probs=30.9
Q ss_pred ccccccc-CCcCeEEe--cCcc----cchhhhhcC----CCCccccccccceE
Q psy2733 480 TCTICME-RCRNTIFL--CGHG----TCDVCAKTL----KFCHMCRKLIEQRI 521 (644)
Q Consensus 480 ~C~iC~~-~~~~~~~~--CgH~----~C~~C~~~~----~~Cp~Cr~~i~~~~ 521 (644)
.|+-|-. ++.+..|- ||.. .|..|...+ +.||-|-.+....-
T Consensus 3 ~Cp~Cg~~n~~~akFC~~CG~~l~~~~Cp~CG~~~~~~~~fC~~CG~~~~~~~ 55 (645)
T PRK14559 3 ICPQCQFENPNNNRFCQKCGTSLTHKPCPQCGTEVPVDEAHCPNCGAETGTIW 55 (645)
T ss_pred cCCCCCCcCCCCCccccccCCCCCCCcCCCCCCCCCcccccccccCCcccchh
Confidence 5888854 45667776 9872 399998865 57999998888643
No 286
>PF08084 PROCT: PROCT (NUC072) domain; InterPro: IPR012984 The PROCT domain is the C-terminal domain in pre-mRNA splicing factors of PRO8 family [].; PDB: 2P87_A 2P8R_A 3SBG_A 2OG4_A.
Probab=40.85 E-value=17 Score=32.04 Aligned_cols=21 Identities=43% Similarity=0.717 Sum_probs=16.2
Q ss_pred CccceEEEEEEeeCceeehhH
Q psy2733 539 NTMFHIRIQILLSDGHLGFVM 559 (644)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~ 559 (644)
.+-+..+.|++|||-++||-|
T Consensus 43 ~p~~~ek~QllLSdr~~GfFl 63 (125)
T PF08084_consen 43 SPSFYEKVQLLLSDRILGFFL 63 (125)
T ss_dssp -GGGEEEEEEEEETTS--EEE
T ss_pred CcchhheeeeeeecceeeEEE
Confidence 567889999999999999976
No 287
>PF04710 Pellino: Pellino; InterPro: IPR006800 Pellino is involved in Toll-like signalling pathways, and associates with the kinase domain of the Pelle Ser/Thr kinase [, , ].; PDB: 3EGB_B 3EGA_A.
Probab=40.26 E-value=9.4 Score=40.17 Aligned_cols=37 Identities=22% Similarity=0.527 Sum_probs=0.0
Q ss_pred cccccceEEecCCCccccchhhHHHh--------------hhhhccccceeee
Q psy2733 405 SELGVANVLLKPCNHAVACEECSSRM--------------KKCIMCKTFIEMR 443 (644)
Q Consensus 405 ~d~~~~~v~~~PC~h~~~C~~C~~~~--------------~~Cp~Cr~~i~~~ 443 (644)
.|....+..|.||||++ ++=..+. -.||+|-.++...
T Consensus 353 vD~~~pthaF~PCGHv~--SekTa~yWs~i~lPhGt~~f~a~CPFCa~~L~g~ 403 (416)
T PF04710_consen 353 VDSGPPTHAFNPCGHVC--SEKTAKYWSQIPLPHGTHAFHAACPFCATPLDGE 403 (416)
T ss_dssp -----------------------------------------------------
T ss_pred ecCCCCceeeccccccc--chhhhhhhhcCCCCCCcccccccCCcccCcccCC
Confidence 44455788999999974 3333222 2799999998754
No 288
>PF01472 PUA: PUA domain; InterPro: IPR002478 The PUA (PseudoUridine synthase and Archaeosine transglycosylase) domain was named after the proteins in which it was first found []. PUA is a highly conserved RNA-binding motif found in a wide range of archaeal, bacterial and eukaryotic proteins, including enzymes that catalyse tRNA and rRNA post-transcriptional modifications, proteins involved in ribosome biogenesis and translation, as well as in enzymes involved in proline biosynthesis [, ]. The structures of several PUA-RNA complexes reveal a common RNA recognition surface, but also some versatility in the way in which the motif binds to RNA []. PUA motifs are involved in dyskeratosis congenita and cancer, pointing to links between RNA metabolism and human diseases [].; GO: 0003723 RNA binding; PDB: 1ZE2_A 1ZE1_A 1R3E_A 2AB4_A 3R90_D 2J5T_A 2J5V_B 1Q7H_A 2APO_A 2RFK_A ....
Probab=39.98 E-value=9.8 Score=30.25 Aligned_cols=29 Identities=31% Similarity=0.566 Sum_probs=22.5
Q ss_pred CchhhhhhcccCCCCcccCccccccCCCcccc
Q psy2733 602 DKGAATSLCQYLPGASLFCPELQVCPDGYESK 633 (644)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (644)
|+||+.++++ |++||+|...-+...++..
T Consensus 6 d~~a~~~i~~---Ga~L~~~GV~~~~~~f~~g 34 (74)
T PF01472_consen 6 DDGAVEAILN---GASLFAPGVVEVDGDFRKG 34 (74)
T ss_dssp -HHHHHHHHT---TSEEEGGGEEEEETT--TT
T ss_pred CccHHHHHHc---CCCcchHHhEECCCCcCCC
Confidence 6899999998 9999999998887666543
No 289
>TIGR00622 ssl1 transcription factor ssl1. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=39.92 E-value=15 Score=31.82 Aligned_cols=37 Identities=22% Similarity=0.498 Sum_probs=26.7
Q ss_pred CcccccccCCcC------------eEE--e-cCcccchhhhh----cCCCCccccc
Q psy2733 479 NTCTICMERCRN------------TIF--L-CGHGTCDVCAK----TLKFCHMCRK 515 (644)
Q Consensus 479 ~~C~iC~~~~~~------------~~~--~-CgH~~C~~C~~----~~~~Cp~Cr~ 515 (644)
..|.-|...... .++ . |++.+|.+|.. .+..||-|-.
T Consensus 56 ~~C~~C~~~f~~~~~~~~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPGC~~ 111 (112)
T TIGR00622 56 RFCFGCQGPFPKPPVSPFDELKDSHRYVCAVCKNVFCVDCDVFVHESLHCCPGCIH 111 (112)
T ss_pred CcccCcCCCCCCcccccccccccccceeCCCCCCccccccchhhhhhccCCcCCCC
Confidence 469999875443 233 4 88899999987 4678999963
No 290
>KOG0298|consensus
Probab=39.87 E-value=7.1 Score=47.01 Aligned_cols=37 Identities=32% Similarity=0.821 Sum_probs=30.3
Q ss_pred CcccccccCCcCeEEe--cCcccchhhhhcC----CCCccccc
Q psy2733 479 NTCTICMERCRNTIFL--CGHGTCDVCAKTL----KFCHMCRK 515 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~----~~Cp~Cr~ 515 (644)
..|.||.+...+.-+. |||.+|..|.... ..||+|..
T Consensus 1154 ~~c~ic~dil~~~~~I~~cgh~~c~~c~~~~l~~~s~~~~~ks 1196 (1394)
T KOG0298|consen 1154 FVCEICLDILRNQGGIAGCGHEPCCRCDELWLYASSRCPICKS 1196 (1394)
T ss_pred cchHHHHHHHHhcCCeeeechhHhhhHHHHHHHHhccCcchhh
Confidence 6999999998854433 9999999999854 58999983
No 291
>COG4306 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.75 E-value=9.6 Score=33.07 Aligned_cols=23 Identities=26% Similarity=0.699 Sum_probs=19.5
Q ss_pred cchhhhh-cCCCCccccccccceE
Q psy2733 499 TCDVCAK-TLKFCHMCRKLIEQRI 521 (644)
Q Consensus 499 ~C~~C~~-~~~~Cp~Cr~~i~~~~ 521 (644)
||..|.+ .+.+||+|..+|....
T Consensus 30 fcskcgeati~qcp~csasirgd~ 53 (160)
T COG4306 30 FCSKCGEATITQCPICSASIRGDY 53 (160)
T ss_pred HHhhhchHHHhcCCccCCcccccc
Confidence 6888887 5789999999999754
No 292
>KOG0230|consensus
Probab=39.23 E-value=11 Score=46.03 Aligned_cols=34 Identities=21% Similarity=0.526 Sum_probs=24.9
Q ss_pred eEEecCCCccccchhhH----HHhhhhhccccceeeeee
Q psy2733 411 NVLLKPCNHAVACEECS----SRMKKCIMCKTFIEMRVT 445 (644)
Q Consensus 411 ~v~~~PC~h~~~C~~C~----~~~~~Cp~Cr~~i~~~~~ 445 (644)
...+.-||. +.|..|. ..|+.|-.|+.++++...
T Consensus 18 ~~~~~~~g~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 55 (1598)
T KOG0230|consen 18 RHHCRVCGR-VFCSKCQDSPETSIRVCNECRGQWEQGNV 55 (1598)
T ss_pred CCCCcccCc-eeccccCCCCccceeehhhhhhhccccCC
Confidence 345556777 6788887 457899999999988543
No 293
>KOG2807|consensus
Probab=39.22 E-value=8.5 Score=39.23 Aligned_cols=37 Identities=22% Similarity=0.504 Sum_probs=26.4
Q ss_pred CcccccccCCcC-eEEe---cCcccchhhhh----cCCCCccccc
Q psy2733 479 NTCTICMERCRN-TIFL---CGHGTCDVCAK----TLKFCHMCRK 515 (644)
Q Consensus 479 ~~C~iC~~~~~~-~~~~---CgH~~C~~C~~----~~~~Cp~Cr~ 515 (644)
+.|-.|.+.... ..+. |.|.||.+|.. .+..||-|.-
T Consensus 331 ~~Cf~C~~~~~~~~~y~C~~Ck~~FCldCDv~iHesLh~CpgCeh 375 (378)
T KOG2807|consen 331 RFCFACQGELLSSGRYRCESCKNVFCLDCDVFIHESLHNCPGCEH 375 (378)
T ss_pred cceeeeccccCCCCcEEchhccceeeccchHHHHhhhhcCCCcCC
Confidence 559999544333 3343 77899999987 4578999973
No 294
>COG5220 TFB3 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
Probab=39.00 E-value=11 Score=36.68 Aligned_cols=40 Identities=25% Similarity=0.750 Sum_probs=28.5
Q ss_pred CcccccccC---CcCeEEe----cCcccchhhhhcC-----CCCc--ccccccc
Q psy2733 479 NTCTICMER---CRNTIFL----CGHGTCDVCAKTL-----KFCH--MCRKLIE 518 (644)
Q Consensus 479 ~~C~iC~~~---~~~~~~~----CgH~~C~~C~~~~-----~~Cp--~Cr~~i~ 518 (644)
..|+||..- ..++.++ |-|..|.+|..++ .+|| -|.+-..
T Consensus 11 ~~CPvCksDrYLnPdik~linPECyHrmCESCvdRIFs~GpAqCP~~gC~kILR 64 (314)
T COG5220 11 RRCPVCKSDRYLNPDIKILINPECYHRMCESCVDRIFSRGPAQCPYKGCGKILR 64 (314)
T ss_pred ccCCccccccccCCCeEEEECHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHH
Confidence 579999643 2344443 9999999999975 4899 7875443
No 295
>KOG0826|consensus
Probab=38.50 E-value=18 Score=37.02 Aligned_cols=43 Identities=16% Similarity=0.429 Sum_probs=32.1
Q ss_pred hhcCcccccccCCcCeE-Ee-cCcccchhhhhc----CCCCcccccccc
Q psy2733 476 EEMNTCTICMERCRNTI-FL-CGHGTCDVCAKT----LKFCHMCRKLIE 518 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~-~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~ 518 (644)
.+...|+||+....+.. +. -|-++|..|+-. -.+||+---|+.
T Consensus 298 ~~~~~CpvClk~r~Nptvl~vSGyVfCY~Ci~~Yv~~~~~CPVT~~p~~ 346 (357)
T KOG0826|consen 298 PDREVCPVCLKKRQNPTVLEVSGYVFCYPCIFSYVVNYGHCPVTGYPAS 346 (357)
T ss_pred CccccChhHHhccCCCceEEecceEEeHHHHHHHHHhcCCCCccCCcch
Confidence 34468999998877744 44 799999999983 478998665543
No 296
>PF10272 Tmpp129: Putative transmembrane protein precursor; InterPro: IPR018801 This entry consists of proteins conserved from worms to humans. They are purported to be transmembrane protein-precursors but their function is unknown.
Probab=38.26 E-value=23 Score=37.42 Aligned_cols=20 Identities=30% Similarity=0.748 Sum_probs=17.0
Q ss_pred hcCcccccccCCcCeEEe--cC
Q psy2733 477 EMNTCTICMERCRNTIFL--CG 496 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~~~--Cg 496 (644)
+...|.=||....++.+. |.
T Consensus 270 e~e~CigC~~~~~~vkl~k~C~ 291 (358)
T PF10272_consen 270 ELEPCIGCMQAQPNVKLVKRCA 291 (358)
T ss_pred ccCCccccccCCCCcEEEeccC
Confidence 346799999999999998 93
No 297
>PF06155 DUF971: Protein of unknown function (DUF971); InterPro: IPR010376 This domain is found in gamma-butyrobetaine dioxygenase and trimethyllysine dioxygenase proteins.; PDB: 2L6N_A 3LUU_A 2L6P_A 3MS5_A 3O2G_A 3N6W_A.
Probab=36.58 E-value=18 Score=29.93 Aligned_cols=49 Identities=18% Similarity=0.179 Sum_probs=23.6
Q ss_pred CCCCccccccccceEEEEEeeecCCCCCCCCCCccceEEEEEEeeCceee
Q psy2733 507 LKFCHMCRKLIEQRINISRAFVSPDQNGNTTSNTMFHIRIQILLSDGHLG 556 (644)
Q Consensus 507 ~~~Cp~Cr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (644)
.-.|+.|+.+-...-.+ .....+.......-..+-+--+||+-+|||=+
T Consensus 32 ~C~Ca~C~~~~~~~~~~-~~~~~~~~v~~~~i~~~G~y~l~i~WsDGH~s 80 (89)
T PF06155_consen 32 NCPCAECRGEETGQRRL-DTADIPPDVRPKSIEPVGNYALRITWSDGHDS 80 (89)
T ss_dssp T-SSSSTCSTTTTEE------GCGTTTTEEEEEEETTTEEEEEETTSB--
T ss_pred cCCChhhccccccCccc-cccccCCCceEeEEEECCCCEEEEEECCCCce
Confidence 35799999554433222 22222332222222334345689999999954
No 298
>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A.
Probab=34.73 E-value=23 Score=28.27 Aligned_cols=41 Identities=22% Similarity=0.667 Sum_probs=17.2
Q ss_pred cCcccccccCCc----CeEEe-cCc---ccchhhhh-----cCCCCcccccccc
Q psy2733 478 MNTCTICMERCR----NTIFL-CGH---GTCDVCAK-----TLKFCHMCRKLIE 518 (644)
Q Consensus 478 ~~~C~iC~~~~~----~~~~~-CgH---~~C~~C~~-----~~~~Cp~Cr~~i~ 518 (644)
...|.||=|..- --+|. |.. -+|..|.+ ..+.||.|+.+-+
T Consensus 9 ~qiCqiCGD~VGl~~~Ge~FVAC~eC~fPvCr~CyEYErkeg~q~CpqCkt~yk 62 (80)
T PF14569_consen 9 GQICQICGDDVGLTENGEVFVACHECAFPVCRPCYEYERKEGNQVCPQCKTRYK 62 (80)
T ss_dssp S-B-SSS--B--B-SSSSB--S-SSS-----HHHHHHHHHTS-SB-TTT--B--
T ss_pred CcccccccCccccCCCCCEEEEEcccCCccchhHHHHHhhcCcccccccCCCcc
Confidence 368999976542 34566 665 34999987 3578999997666
No 299
>KOG0311|consensus
Probab=33.52 E-value=7.6 Score=40.10 Aligned_cols=47 Identities=23% Similarity=0.546 Sum_probs=35.6
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceeeeeec
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEMRVTT 446 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~~~~~ 446 (644)
..|.||++..-....-.-|+|. .|.+|.-.- ..||.||+....+-..
T Consensus 44 v~c~icl~llk~tmttkeClhr-fc~~ci~~a~r~gn~ecptcRk~l~SkrsL 95 (381)
T KOG0311|consen 44 VICPICLSLLKKTMTTKECLHR-FCFDCIWKALRSGNNECPTCRKKLVSKRSL 95 (381)
T ss_pred hccHHHHHHHHhhcccHHHHHH-HHHHHHHHHHHhcCCCCchHHhhccccccC
Confidence 4599999976455555579999 599998443 3899999988776544
No 300
>PF07975 C1_4: TFIIH C1-like domain; InterPro: IPR004595 All proteins in this domain for which functions are known are components of the TFIIH complex which is involved in the initiation of transcription and nucleotide excision repair. It includes the yeast transcription factor Ssl1 (Suppressor of stem-loop protein 1) that is essential for translation initiation and affects UV resistance. The C-terminal region is essential for transcription activity. This regions binds three zinc atoms through two independent domain. The first contains a C4 zinc finger motif, whereas the second is characterised by a CX(2)CX(2-4)FCADCD motif. The solution structure of the second C-terminal domain revealed homology with the regulatory domain of protein kinase C [].; GO: 0006281 DNA repair, 0005634 nucleus; PDB: 1Z60_A.
Probab=33.41 E-value=35 Score=25.05 Aligned_cols=20 Identities=35% Similarity=0.752 Sum_probs=12.6
Q ss_pred cCcccchhhhh----cCCCCcccc
Q psy2733 495 CGHGTCDVCAK----TLKFCHMCR 514 (644)
Q Consensus 495 CgH~~C~~C~~----~~~~Cp~Cr 514 (644)
|++.+|.+|-. .+..||-|-
T Consensus 27 C~~~FC~dCD~fiHE~LH~CPGC~ 50 (51)
T PF07975_consen 27 CKNHFCIDCDVFIHETLHNCPGCE 50 (51)
T ss_dssp TT--B-HHHHHTTTTTS-SSSTT-
T ss_pred CCCccccCcChhhhccccCCcCCC
Confidence 78899999987 467899884
No 301
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=33.38 E-value=11 Score=34.26 Aligned_cols=24 Identities=25% Similarity=0.569 Sum_probs=20.7
Q ss_pred ccchhhhh-cCCCCccccccccceE
Q psy2733 498 GTCDVCAK-TLKFCHMCRKLIEQRI 521 (644)
Q Consensus 498 ~~C~~C~~-~~~~Cp~Cr~~i~~~~ 521 (644)
.||..|.. .+..||.|..+|....
T Consensus 29 ~fC~kCG~~tI~~Cp~C~~~IrG~y 53 (158)
T PF10083_consen 29 KFCSKCGAKTITSCPNCSTPIRGDY 53 (158)
T ss_pred HHHHHhhHHHHHHCcCCCCCCCCce
Confidence 47999988 4789999999999864
No 302
>COG5194 APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning]
Probab=33.16 E-value=38 Score=27.17 Aligned_cols=29 Identities=21% Similarity=0.409 Sum_probs=22.5
Q ss_pred CeEEe-cCcccchhhhhc----CCCCcccccccc
Q psy2733 490 NTIFL-CGHGTCDVCAKT----LKFCHMCRKLIE 518 (644)
Q Consensus 490 ~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~ 518 (644)
.++.- |.|.|=.-|+.+ -..||++|++-.
T Consensus 48 ~v~wG~CnHaFH~HCI~rWL~Tk~~CPld~q~w~ 81 (88)
T COG5194 48 PVVWGVCNHAFHDHCIYRWLDTKGVCPLDRQTWV 81 (88)
T ss_pred eEEEEecchHHHHHHHHHHHhhCCCCCCCCceeE
Confidence 35666 999998888885 257999998753
No 303
>KOG1813|consensus
Probab=33.08 E-value=15 Score=37.04 Aligned_cols=47 Identities=26% Similarity=0.620 Sum_probs=34.9
Q ss_pred CcccccccccccccceEEecCCCccccchhhHHHh----hhhhccccceeeee
Q psy2733 396 NVPVECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRV 444 (644)
Q Consensus 396 ~~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~ 444 (644)
.+|..|.||....+..|+- .|+|. +|+.|+..- .+|++|.+++....
T Consensus 239 ~~Pf~c~icr~~f~~pVvt-~c~h~-fc~~ca~~~~qk~~~c~vC~~~t~g~~ 289 (313)
T KOG1813|consen 239 LLPFKCFICRKYFYRPVVT-KCGHY-FCEVCALKPYQKGEKCYVCSQQTHGSF 289 (313)
T ss_pred cCCccccccccccccchhh-cCCce-eehhhhccccccCCcceeccccccccc
Confidence 3456799999876455555 89999 599999543 48999998886544
No 304
>KOG1001|consensus
Probab=32.65 E-value=21 Score=41.29 Aligned_cols=47 Identities=19% Similarity=0.627 Sum_probs=37.6
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh------hhhhccccceeeeeecCC
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM------KKCIMCKTFIEMRVTTDG 448 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~------~~Cp~Cr~~i~~~~~~~g 448 (644)
..|.+|.+ . ......+|+|. .|.+|.... ..||.||..+.+....+.
T Consensus 455 ~~c~ic~~-~-~~~~it~c~h~-~c~~c~~~~i~~~~~~~~~~cr~~l~~~~l~s~ 507 (674)
T KOG1001|consen 455 HWCHICCD-L-DSFFITRCGHD-FCVECLKKSIQQSENAPCPLCRNVLKEKKLLSA 507 (674)
T ss_pred cccccccc-c-ccceeecccch-HHHHHHHhccccccCCCCcHHHHHHHHHHHhhc
Confidence 67999999 3 66777799999 599999664 379999999988665553
No 305
>COG1592 Rubrerythrin [Energy production and conversion]
Probab=31.50 E-value=39 Score=31.55 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=18.6
Q ss_pred eEEe-cCcccchhhhhcCCCCccccccccce
Q psy2733 491 TIFL-CGHGTCDVCAKTLKFCHMCRKLIEQR 520 (644)
Q Consensus 491 ~~~~-CgH~~C~~C~~~~~~Cp~Cr~~i~~~ 520 (644)
.+.. |||. |.+ +....||+|-.+-...
T Consensus 135 ~vC~vCGy~-~~g--e~P~~CPiCga~k~~F 162 (166)
T COG1592 135 WVCPVCGYT-HEG--EAPEVCPICGAPKEKF 162 (166)
T ss_pred EEcCCCCCc-ccC--CCCCcCCCCCChHHHh
Confidence 3444 6885 444 7778999999876543
No 306
>KOG2113|consensus
Probab=31.28 E-value=36 Score=34.67 Aligned_cols=54 Identities=9% Similarity=-0.016 Sum_probs=41.4
Q ss_pred CCCcccccccccccccceEEecCCCccccchhhHHHh--hhhhccccceeeeeecCC
Q psy2733 394 CQNVPVECAVCSELGVANVLLKPCNHAVACEECSSRM--KKCIMCKTFIEMRVTTDG 448 (644)
Q Consensus 394 ~~~~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~--~~Cp~Cr~~i~~~~~~~g 448 (644)
.+....+|.+|......+ ...||+|-..|.+|+..- ..||.|-..+-..+++.|
T Consensus 339 ~~~s~~~~~~~~~~~~st-~~~~~~~n~~~~~~a~~s~~~~~~~c~~~~~~~~~i~g 394 (394)
T KOG2113|consen 339 GLMSSLKGTSAGFGLLST-IWSGGNMNLSPGSLASASASPTSSTCDHNDHTLVPING 394 (394)
T ss_pred cchhhcccccccCceeee-EeecCCcccChhhhhhcccCCccccccccceeeeecCC
Confidence 344557899999887444 555999999999999754 389999988877776543
No 307
>KOG4185|consensus
Probab=30.60 E-value=50 Score=33.96 Aligned_cols=41 Identities=27% Similarity=0.720 Sum_probs=28.0
Q ss_pred ccccccccccc-----ceEEecCCCccccchhhHHHhh-----hhhccccce
Q psy2733 399 VECAVCSELGV-----ANVLLKPCNHAVACEECSSRMK-----KCIMCKTFI 440 (644)
Q Consensus 399 ~~C~iC~d~~~-----~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i 440 (644)
.+|.||.+.-+ ..-...-|||-+ |..|...+- .||+||.+.
T Consensus 4 ~~c~~c~~~~s~~~~~~~p~~l~c~h~~-c~~c~~~l~~~~~i~cpfcR~~~ 54 (296)
T KOG4185|consen 4 PECEICNEDYSSEDGDHIPRVLKCGHTI-CQNCASKLLGNSRILCPFCRETT 54 (296)
T ss_pred CceeecCccccccCcccCCcccccCcee-hHhHHHHHhcCceeeccCCCCcc
Confidence 35888876421 111222499985 999998874 789999887
No 308
>KOG4218|consensus
Probab=30.31 E-value=26 Score=36.03 Aligned_cols=25 Identities=24% Similarity=0.573 Sum_probs=16.2
Q ss_pred cccccccccccceEEecCCCccccchhhHH
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSS 428 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~ 428 (644)
+.|.||.|..+..+. -+.+|++|-.
T Consensus 16 ElCPVCGDkVSGYHY-----GLLTCESCKG 40 (475)
T KOG4218|consen 16 ELCPVCGDKVSGYHY-----GLLTCESCKG 40 (475)
T ss_pred cccccccCcccccee-----eeeehhhhhh
Confidence 459999997533322 1347999973
No 309
>PLN02189 cellulose synthase
Probab=28.59 E-value=49 Score=39.69 Aligned_cols=41 Identities=22% Similarity=0.717 Sum_probs=30.7
Q ss_pred CcccccccC----CcCeEEe-cCc---ccchhhhhc-----CCCCccccccccc
Q psy2733 479 NTCTICMER----CRNTIFL-CGH---GTCDVCAKT-----LKFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~----~~~~~~~-CgH---~~C~~C~~~-----~~~Cp~Cr~~i~~ 519 (644)
..|.||-|. ...-.|. |.- -+|..|.+- -+.||-|++.-++
T Consensus 35 ~~C~iCgd~vg~~~~g~~fvaC~~C~fpvCr~Cyeyer~eg~q~CpqCkt~Y~r 88 (1040)
T PLN02189 35 QVCEICGDEIGLTVDGDLFVACNECGFPVCRPCYEYERREGTQNCPQCKTRYKR 88 (1040)
T ss_pred ccccccccccCcCCCCCEEEeeccCCCccccchhhhhhhcCCccCcccCCchhh
Confidence 589999988 4445666 654 369999882 3689999988773
No 310
>KOG0801|consensus
Probab=27.45 E-value=24 Score=32.24 Aligned_cols=13 Identities=31% Similarity=0.861 Sum_probs=9.5
Q ss_pred hcCcccccccCCc
Q psy2733 477 EMNTCTICMERCR 489 (644)
Q Consensus 477 ~~~~C~iC~~~~~ 489 (644)
+..+|+||+|...
T Consensus 176 dkGECvICLEdL~ 188 (205)
T KOG0801|consen 176 DKGECVICLEDLE 188 (205)
T ss_pred cCCcEEEEhhhcc
Confidence 4467999998654
No 311
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.98 E-value=68 Score=29.40 Aligned_cols=29 Identities=24% Similarity=0.607 Sum_probs=23.0
Q ss_pred cccchhhHHH-hhhhhccccceeeeeecCC
Q psy2733 420 AVACEECSSR-MKKCIMCKTFIEMRVTTDG 448 (644)
Q Consensus 420 ~~~C~~C~~~-~~~Cp~Cr~~i~~~~~~~g 448 (644)
.-.|+.|... +..||-|..+|+...-.+|
T Consensus 28 ~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~g 57 (158)
T PF10083_consen 28 EKFCSKCGAKTITSCPNCSTPIRGDYHVEG 57 (158)
T ss_pred HHHHHHhhHHHHHHCcCCCCCCCCceecCC
Confidence 3469999855 7899999999998766654
No 312
>KOG0298|consensus
Probab=25.92 E-value=28 Score=42.26 Aligned_cols=114 Identities=17% Similarity=0.306 Sum_probs=62.9
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh----hhhccccceeeeeec-C----------C----CccCCCcccch
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMCKTFIEMRVTT-D----------G----RMVPGIERCDK 459 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~~~~~-~----------g----~~~~~~~~~~~ 459 (644)
..|.+|.|.....-...-|||.. |..|..... +||.|....+.--+- + + +.+--.+ ..+
T Consensus 1154 ~~c~ic~dil~~~~~I~~cgh~~-c~~c~~~~l~~~s~~~~~ksi~~dfg~kI~~v~~~il~iK~k~~qekvIvfs-qws 1231 (1394)
T KOG0298|consen 1154 FVCEICLDILRNQGGIAGCGHEP-CCRCDELWLYASSRCPICKSIKGDFGTKIDSVVIAILYIKFKNEQEKVIVFS-QWS 1231 (1394)
T ss_pred cchHHHHHHHHhcCCeeeechhH-hhhHHHHHHHHhccCcchhhhhhhhccCchhHHHHHHHHhccCcCceEEEEE-ehH
Confidence 46999998642222333799985 778886653 899999555441110 0 0 0000000 111
Q ss_pred hHHHHH------HHHHHhhhh-hhhcCcccccccCCcCeEEe--cCcccchhhhhcC-------------CCCccccc
Q psy2733 460 SKIERV------NYLESKISE-IEEMNTCTICMERCRNTIFL--CGHGTCDVCAKTL-------------KFCHMCRK 515 (644)
Q Consensus 460 ~~~~~~------~~l~~~~~~-~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~-------------~~Cp~Cr~ 515 (644)
...+.. +-++.++.. -++...|.+|+... ++.++ |+|..|-.|.+.. ..||+||.
T Consensus 1232 ~~ldV~e~~~~~N~I~~~~~~~t~d~~dc~~~fk~I-~clll~~~~~~~GLNL~eA~Hvfl~ePiLN~~~E~QAigRv 1308 (1394)
T KOG0298|consen 1232 VVLDVKELRYLMNLIKKQLDGETEDFDDCIICFKSI-DCLLLFVSKGSKGLNLIEATHVFLVEPILNPGDEAQAIGRV 1308 (1394)
T ss_pred HHHHHHHHHHHhhhhHhhhccCCcchhhhhhhcccc-eEEEEEeccCcccccHHhhhhhheeccccCchHHHhhhhhh
Confidence 111111 111111111 23447899999994 44444 9999999998832 36999995
No 313
>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins. Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.
Probab=25.13 E-value=62 Score=23.82 Aligned_cols=7 Identities=29% Similarity=0.918 Sum_probs=5.4
Q ss_pred hhhcccc
Q psy2733 432 KCIMCKT 438 (644)
Q Consensus 432 ~Cp~Cr~ 438 (644)
.||+|..
T Consensus 4 ~CP~C~~ 10 (54)
T PF05605_consen 4 TCPYCGK 10 (54)
T ss_pred CCCCCCC
Confidence 5888886
No 314
>PF10764 Gin: Inhibitor of sigma-G Gin; InterPro: IPR019700 Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB [].
Probab=24.82 E-value=44 Score=23.98 Aligned_cols=28 Identities=29% Similarity=0.668 Sum_probs=21.2
Q ss_pred cccccccCCcCeEEecCcccchhhhhcC
Q psy2733 480 TCTICMERCRNTIFLCGHGTCDVCAKTL 507 (644)
Q Consensus 480 ~C~iC~~~~~~~~~~CgH~~C~~C~~~~ 507 (644)
.|.||-..+.+-+...|+.+|.+|-..+
T Consensus 1 ~CiiC~~~~~~GI~I~~~fIC~~CE~~i 28 (46)
T PF10764_consen 1 KCIICGKEKEEGIHIYGKFICSDCEKEI 28 (46)
T ss_pred CeEeCCCcCCCCEEEECeEehHHHHHHh
Confidence 3788888887766668888888887755
No 315
>PLN02400 cellulose synthase
Probab=24.67 E-value=65 Score=38.87 Aligned_cols=41 Identities=22% Similarity=0.720 Sum_probs=29.9
Q ss_pred CcccccccCCc----CeEEe-cCcc---cchhhhh-----cCCCCccccccccc
Q psy2733 479 NTCTICMERCR----NTIFL-CGHG---TCDVCAK-----TLKFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~----~~~~~-CgH~---~C~~C~~-----~~~~Cp~Cr~~i~~ 519 (644)
..|.||=|..- --.|. |..+ +|+.|.+ ..+.||-|+..-++
T Consensus 37 qiCqICGD~VG~t~dGe~FVAC~eCaFPVCRpCYEYERkeGnq~CPQCkTrYkR 90 (1085)
T PLN02400 37 QICQICGDDVGVTETGDVFVACNECAFPVCRPCYEYERKDGTQCCPQCKTRYRR 90 (1085)
T ss_pred ceeeecccccCcCCCCCEEEEEccCCCccccchhheecccCCccCcccCCcccc
Confidence 58999987632 23566 6664 6999988 24689999988773
No 316
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=24.16 E-value=57 Score=36.34 Aligned_cols=44 Identities=25% Similarity=0.568 Sum_probs=34.5
Q ss_pred cCcccccccCCcCeEEe-cCc-------ccchhhhhcCCC-----CccccccccceE
Q psy2733 478 MNTCTICMERCRNTIFL-CGH-------GTCDVCAKTLKF-----CHMCRKLIEQRI 521 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~-CgH-------~~C~~C~~~~~~-----Cp~Cr~~i~~~~ 521 (644)
+..|+.|...-.-.++. |-- ..|..|...+.. ||-|+.......
T Consensus 53 ~~pc~~c~gkG~V~v~~~c~~c~G~gkv~~c~~cG~~~~~~~~~lc~~c~~~~~~vy 109 (715)
T COG1107 53 EIPCPKCRGKGTVTVYDTCPECGGTGKVLTCDICGDIIVPWEEGLCPECRRKPKIVY 109 (715)
T ss_pred CCCCCeeccceeEEEEeecccCCCceeEEeeccccceecCcccccChhHhhCCceeE
Confidence 35899999998888887 632 249999998765 999999888433
No 317
>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines. Several members are annotated as putative helicases.
Probab=24.15 E-value=39 Score=21.03 Aligned_cols=13 Identities=23% Similarity=0.534 Sum_probs=8.1
Q ss_pred CCCccccccccce
Q psy2733 508 KFCHMCRKLIEQR 520 (644)
Q Consensus 508 ~~Cp~Cr~~i~~~ 520 (644)
+.||-|++.|...
T Consensus 1 K~CP~C~~~V~~~ 13 (26)
T PF10571_consen 1 KTCPECGAEVPES 13 (26)
T ss_pred CcCCCCcCCchhh
Confidence 3577777766543
No 318
>PF07191 zinc-ribbons_6: zinc-ribbons; InterPro: IPR010807 This family consists of several short, hypothetical bacterial proteins of around 70 residues in length. Members of this family 8 highly conserved cysteine residues. The function of the family is unknown.; PDB: 2JRP_A 2JNE_A.
Probab=23.47 E-value=16 Score=28.66 Aligned_cols=38 Identities=34% Similarity=0.751 Sum_probs=19.1
Q ss_pred CcccccccCCcCeEEecCcccchhhhhcC---CCCccccccccc
Q psy2733 479 NTCTICMERCRNTIFLCGHGTCDVCAKTL---KFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~CgH~~C~~C~~~~---~~Cp~Cr~~i~~ 519 (644)
..|+.|..... .. =||..|..|.... ..||-|.++++.
T Consensus 2 ~~CP~C~~~L~-~~--~~~~~C~~C~~~~~~~a~CPdC~~~Le~ 42 (70)
T PF07191_consen 2 NTCPKCQQELE-WQ--GGHYHCEACQKDYKKEAFCPDCGQPLEV 42 (70)
T ss_dssp -B-SSS-SBEE-EE--TTEEEETTT--EEEEEEE-TTT-SB-EE
T ss_pred CcCCCCCCccE-Ee--CCEEECccccccceecccCCCcccHHHH
Confidence 46888876622 22 2666677777754 468888888774
No 319
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=23.20 E-value=54 Score=39.50 Aligned_cols=40 Identities=23% Similarity=0.641 Sum_probs=29.3
Q ss_pred CcccccccCCc----CeEEe-cCcc---cchhhhh-----cCCCCcccccccc
Q psy2733 479 NTCTICMERCR----NTIFL-CGHG---TCDVCAK-----TLKFCHMCRKLIE 518 (644)
Q Consensus 479 ~~C~iC~~~~~----~~~~~-CgH~---~C~~C~~-----~~~~Cp~Cr~~i~ 518 (644)
..|.||=|..- .-.|. |..+ +|+.|.+ .-+.||-|+..-+
T Consensus 18 qiCqICGD~vg~~~~Ge~FVAC~eC~FPVCrpCYEYEr~eG~q~CPqCktrYk 70 (1079)
T PLN02638 18 QVCQICGDNVGKTVDGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTKYK 70 (1079)
T ss_pred ceeeecccccCcCCCCCEEEEeccCCCccccchhhhhhhcCCccCCccCCchh
Confidence 58999987632 23555 6664 6999987 3468999998777
No 320
>KOG0955|consensus
Probab=21.90 E-value=60 Score=39.25 Aligned_cols=64 Identities=22% Similarity=0.500 Sum_probs=42.2
Q ss_pred hhhhhcCcccccccCCcC----eEEe--cC---cccchhhhhcC-CCCccccccccceEEEEEeeecCCCCCCCC
Q psy2733 473 SEIEEMNTCTICMERCRN----TIFL--CG---HGTCDVCAKTL-KFCHMCRKLIEQRINISRAFVSPDQNGNTT 537 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~----~~~~--Cg---H~~C~~C~~~~-~~Cp~Cr~~i~~~~~~~~~~~~~~~~~~~~ 537 (644)
..+++...|.||++.... +||- |+ |.-|++ ..-+ ..+..||.=..+..+..+..+.|+.+|.-.
T Consensus 214 ~~~~~D~~C~iC~~~~~~n~n~ivfCD~Cnl~VHq~Cyg-i~~ipeg~WlCr~Cl~s~~~~v~c~~cp~~~gAFk 287 (1051)
T KOG0955|consen 214 ALLEEDAVCCICLDGECQNSNVIVFCDGCNLAVHQECYG-IPFIPEGQWLCRRCLQSPQRPVRCLLCPSKGGAFK 287 (1051)
T ss_pred cccCCCccceeecccccCCCceEEEcCCCcchhhhhccC-CCCCCCCcEeehhhccCcCcccceEeccCCCCcce
Confidence 345667899999998887 5554 76 555666 2222 356666655555555558889999888543
No 321
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=21.38 E-value=62 Score=37.76 Aligned_cols=21 Identities=24% Similarity=0.645 Sum_probs=14.4
Q ss_pred ceEEecCCCccccchhhHHHh
Q psy2733 410 ANVLLKPCNHAVACEECSSRM 430 (644)
Q Consensus 410 ~~v~~~PC~h~~~C~~C~~~~ 430 (644)
..+.|.-|||..-|..|...+
T Consensus 434 ~~l~C~~Cg~v~~Cp~Cd~~l 454 (730)
T COG1198 434 PLLLCRDCGYIAECPNCDSPL 454 (730)
T ss_pred ceeecccCCCcccCCCCCcce
Confidence 356666777777777777554
No 322
>COG5175 MOT2 Transcriptional repressor [Transcription]
Probab=21.35 E-value=46 Score=34.21 Aligned_cols=43 Identities=23% Similarity=0.583 Sum_probs=29.5
Q ss_pred cccccccccc---cceEEecCCCccccchhhHHHhh-----hhhccccceee
Q psy2733 399 VECAVCSELG---VANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~---~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~ 442 (644)
.+|..|.+.. -.+..--|||-+ +|..|...++ +||-||.....
T Consensus 15 d~cplcie~mditdknf~pc~cgy~-ic~fc~~~irq~lngrcpacrr~y~d 65 (480)
T COG5175 15 DYCPLCIEPMDITDKNFFPCPCGYQ-ICQFCYNNIRQNLNGRCPACRRKYDD 65 (480)
T ss_pred ccCcccccccccccCCcccCCcccH-HHHHHHHHHHhhccCCChHhhhhccc
Confidence 3599998641 122222267776 5999999887 89999976654
No 323
>KOG2068|consensus
Probab=20.83 E-value=66 Score=33.27 Aligned_cols=43 Identities=35% Similarity=0.755 Sum_probs=31.4
Q ss_pred CcccccccCC---cCeEEe--cCcccchhhhhcC----CCCccccccccceE
Q psy2733 479 NTCTICMERC---RNTIFL--CGHGTCDVCAKTL----KFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~---~~~~~~--CgH~~C~~C~~~~----~~Cp~Cr~~i~~~~ 521 (644)
..|+||.+-. ....+- |||..|..|...+ ..||.||++.....
T Consensus 250 ~s~p~~~~~~~~~d~~~lP~~~~~~~~l~~~~t~~~~~~~~~~~rk~~~~~t 301 (327)
T KOG2068|consen 250 PSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTISDGDGRCPGCRKPYERNT 301 (327)
T ss_pred CCCCCCCCcccccccccccccccccchhhhhhcccccCCCCCccCCccccCc
Confidence 5799998733 333333 9999999998865 58999997766544
No 324
>KOG1815|consensus
Probab=20.80 E-value=39 Score=37.14 Aligned_cols=30 Identities=37% Similarity=0.724 Sum_probs=25.4
Q ss_pred hhcCcccccccCCcC-eEEe-cCcccchhhhh
Q psy2733 476 EEMNTCTICMERCRN-TIFL-CGHGTCDVCAK 505 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~-~~~~-CgH~~C~~C~~ 505 (644)
.....|-||++.... ++.. |||.+|..|..
T Consensus 68 ~~~~~c~ic~~~~~~~~~~~~c~H~~c~~cw~ 99 (444)
T KOG1815|consen 68 KGDVQCGICVESYDGEIIGLGCGHPFCPPCWT 99 (444)
T ss_pred CccccCCcccCCCcchhhhcCCCcHHHHHHHH
Confidence 334679999999986 7777 99999999987
No 325
>KOG1812|consensus
Probab=20.11 E-value=34 Score=36.71 Aligned_cols=28 Identities=39% Similarity=0.876 Sum_probs=19.6
Q ss_pred cCcccccc-cCCcC--eEE-e-cCcccchhhhh
Q psy2733 478 MNTCTICM-ERCRN--TIF-L-CGHGTCDVCAK 505 (644)
Q Consensus 478 ~~~C~iC~-~~~~~--~~~-~-CgH~~C~~C~~ 505 (644)
...|.||+ +.+.. +.+ . |||.+|..|..
T Consensus 146 ~~~C~iC~~e~~~~~~~f~~~~C~H~fC~~C~k 178 (384)
T KOG1812|consen 146 KEECGICFVEDPEAEDMFSVLKCGHRFCKDCVK 178 (384)
T ss_pred cccCccCccccccHhhhHHHhcccchhhhHHhH
Confidence 35799999 33222 222 2 99999999988
No 326
>KOG1595|consensus
Probab=20.10 E-value=21 Score=39.13 Aligned_cols=70 Identities=13% Similarity=0.050 Sum_probs=0.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCC-CCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARG-ACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~G-a~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
||||++|+..|.++++.+++.-+ .+++..-.+|+. |.|+.+.....++.
T Consensus 59 R~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e~---------------------------- 108 (528)
T KOG1595|consen 59 RRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTER---------------------------- 108 (528)
T ss_pred ccccchhhhcCccccccceeecchhhccccCCCCcc--cchhcccccCCcce----------------------------
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcH
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTP 142 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~Tp 142 (644)
+..|+.+++..+.+|..|.-+
T Consensus 109 ------------------------------------------~~hL~~~k~~~~~tda~g~~~ 129 (528)
T KOG1595|consen 109 ------------------------------------------TYHLRYYKTLPCVTDARGNCV 129 (528)
T ss_pred ------------------------------------------eEeccccccccCccccCCCcc
No 327
>PRK00418 DNA gyrase inhibitor; Reviewed
Probab=20.10 E-value=35 Score=26.17 Aligned_cols=22 Identities=36% Similarity=0.523 Sum_probs=14.3
Q ss_pred CCCccccccccc-eEEEEEeeec
Q psy2733 508 KFCHMCRKLIEQ-RINISRAFVS 529 (644)
Q Consensus 508 ~~Cp~Cr~~i~~-~~~~~~~~~~ 529 (644)
..||+|++++.- ...-||-|-|
T Consensus 7 v~CP~C~k~~~w~~~~~~rPFCS 29 (62)
T PRK00418 7 VNCPTCGKPVEWGEISPFRPFCS 29 (62)
T ss_pred ccCCCCCCcccccCCCCcCCccc
Confidence 579999998752 1234566655
Done!