Query psy2733
Match_columns 644
No_of_seqs 504 out of 4511
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 23:49:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2733.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2733hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 4.5E-45 1.5E-49 397.9 33.2 287 1-291 15-327 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.8E-44 6.3E-49 393.1 34.7 316 1-351 48-389 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 1.4E-41 4.7E-46 357.5 31.6 271 2-360 27-324 (337)
4 1wdy_A 2-5A-dependent ribonucl 100.0 4.5E-41 1.5E-45 342.9 32.1 254 1-337 6-284 (285)
5 3utm_A Tankyrase-1; tankyrase, 100.0 5.1E-40 1.7E-44 345.8 31.1 273 1-358 25-330 (351)
6 3d9h_A CDNA FLJ77766, highly s 100.0 2.7E-40 9.3E-45 339.8 28.3 249 1-359 16-275 (285)
7 2xai_A ASB-9, ankyrin repeat a 100.0 2.6E-40 8.9E-45 335.3 26.0 237 1-349 4-248 (261)
8 4g8k_A 2-5A-dependent ribonucl 100.0 2.1E-38 7.1E-43 333.3 29.6 250 1-336 60-331 (337)
9 3ljn_A Hypothetical protein; a 100.0 2.1E-39 7.1E-44 344.6 21.8 241 1-351 21-301 (364)
10 1oy3_D Transcription factor in 100.0 1.8E-38 6E-43 323.9 22.5 240 1-348 10-267 (282)
11 2fo1_E LIN-12 protein; beta-ba 100.0 4.4E-39 1.5E-43 343.8 17.9 193 123-350 150-357 (373)
12 3b7b_A Euchromatic histone-lys 100.0 4.7E-37 1.6E-41 305.7 28.3 223 24-353 2-224 (237)
13 1wdy_A 2-5A-dependent ribonucl 100.0 7E-37 2.4E-41 311.8 29.0 249 31-359 3-275 (285)
14 2xai_A ASB-9, ankyrin repeat a 100.0 3.8E-37 1.3E-41 312.0 26.7 198 125-359 22-219 (261)
15 1yyh_A HN1;, notch 1, ankyrin 100.0 1.4E-37 4.7E-42 313.6 22.9 211 1-287 11-235 (253)
16 3d9h_A CDNA FLJ77766, highly s 100.0 1.9E-37 6.3E-42 318.7 23.6 222 1-334 60-282 (285)
17 3b7b_A Euchromatic histone-lys 100.0 7.8E-37 2.7E-41 304.1 27.1 211 1-287 12-222 (237)
18 1k1a_A B-cell lymphoma 3-encod 100.0 1.5E-37 5.3E-42 309.6 21.3 211 1-287 10-228 (241)
19 1yyh_A HN1;, notch 1, ankyrin 100.0 1.4E-37 4.8E-42 313.6 21.2 195 122-350 39-234 (253)
20 1k1a_A B-cell lymphoma 3-encod 100.0 1E-36 3.5E-41 303.6 26.5 229 27-358 3-234 (241)
21 3aji_A 26S proteasome non-ATPa 100.0 4.2E-37 1.4E-41 304.8 23.5 224 1-332 7-231 (231)
22 2fo1_E LIN-12 protein; beta-ba 100.0 2.5E-37 8.5E-42 330.2 22.3 179 122-332 182-372 (373)
23 3utm_A Tankyrase-1; tankyrase, 100.0 3.2E-36 1.1E-40 316.7 29.9 260 1-350 59-350 (351)
24 4b93_B Ankyrin repeat domain-c 100.0 9.8E-38 3.4E-42 318.0 16.3 209 2-287 13-230 (269)
25 1s70_B 130 kDa myosin-binding 100.0 1.8E-36 6.2E-41 312.3 25.1 245 2-362 42-286 (299)
26 4b93_B Ankyrin repeat domain-c 100.0 4.8E-37 1.7E-41 312.9 18.1 230 27-357 5-236 (269)
27 2dzn_A Probable 26S proteasome 100.0 1.5E-35 5.1E-40 292.8 25.4 191 134-358 31-226 (228)
28 2dzn_A Probable 26S proteasome 100.0 1.1E-35 3.9E-40 293.6 23.2 208 1-284 3-217 (228)
29 3eu9_A Huntingtin-interacting 100.0 2.5E-35 8.6E-40 292.6 25.6 226 1-334 10-238 (240)
30 2f8y_A Notch homolog 1, transl 100.0 2.2E-35 7.4E-40 290.8 22.0 217 10-333 1-218 (223)
31 3kea_A K1L; tropism, ANK repea 100.0 7.5E-36 2.6E-40 306.7 15.9 250 10-356 9-268 (285)
32 3aji_A 26S proteasome non-ATPa 100.0 3.3E-34 1.1E-38 283.9 25.6 182 132-348 33-214 (231)
33 3ljn_A Hypothetical protein; a 100.0 2.6E-35 8.8E-40 313.0 18.7 230 23-360 10-267 (364)
34 1sw6_A Regulatory protein SWI6 100.0 5.2E-36 1.8E-40 314.1 10.1 261 11-349 30-326 (327)
35 3kea_A K1L; tropism, ANK repea 100.0 4.5E-34 1.5E-38 293.5 19.5 210 109-363 27-247 (285)
36 1ikn_D Protein (I-kappa-B-alph 100.0 1.4E-34 4.6E-39 288.2 14.7 220 27-349 2-229 (236)
37 1oy3_D Transcription factor in 100.0 7.5E-34 2.6E-38 289.6 19.7 246 26-380 2-264 (282)
38 3eu9_A Huntingtin-interacting 100.0 4.8E-33 1.6E-37 276.2 23.9 227 26-360 2-233 (240)
39 2f8y_A Notch homolog 1, transl 100.0 3.4E-32 1.2E-36 267.9 25.8 192 1-269 26-218 (223)
40 2rfa_A Transient receptor pote 100.0 1E-32 3.5E-37 273.5 20.6 199 1-272 4-227 (232)
41 1ikn_D Protein (I-kappa-B-alph 100.0 2E-33 6.7E-38 279.7 12.2 207 1-284 9-228 (236)
42 2rfa_A Transient receptor pote 100.0 4.9E-32 1.7E-36 268.6 21.7 179 125-336 22-227 (232)
43 3hra_A Ankyrin repeat family p 100.0 9E-32 3.1E-36 260.4 22.9 189 1-265 6-201 (201)
44 2pnn_A Transient receptor pote 100.0 2.2E-32 7.6E-37 278.4 14.0 221 22-344 2-272 (273)
45 3hra_A Ankyrin repeat family p 100.0 1.4E-30 4.6E-35 252.1 24.8 170 127-329 27-201 (201)
46 1sw6_A Regulatory protein SWI6 100.0 3.4E-32 1.2E-36 285.1 11.8 200 3-286 100-327 (327)
47 2etb_A Transient receptor pote 100.0 1.3E-31 4.3E-36 270.0 14.4 201 1-268 3-247 (256)
48 4gpm_A Engineered protein OR26 100.0 1.4E-30 4.9E-35 245.9 20.2 159 141-334 6-164 (169)
49 2pnn_A Transient receptor pote 100.0 2E-31 7E-36 271.3 15.5 213 1-280 14-272 (273)
50 4gpm_A Engineered protein OR26 100.0 1.6E-30 5.4E-35 245.6 19.8 159 2-270 6-164 (169)
51 2etb_A Transient receptor pote 100.0 1.8E-31 6E-36 269.0 13.0 176 123-332 23-247 (256)
52 1s70_B 130 kDa myosin-binding 100.0 3.9E-31 1.3E-35 272.4 14.3 201 1-284 74-274 (299)
53 3jxi_A Vanilloid receptor-rela 100.0 3.9E-30 1.3E-34 259.6 15.2 202 1-269 6-252 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 4.3E-30 1.5E-34 259.3 12.1 176 124-332 27-251 (260)
55 4hbd_A KN motif and ankyrin re 100.0 2.2E-29 7.5E-34 257.2 13.4 189 1-265 77-273 (276)
56 3v30_A DNA-binding protein rfx 100.0 3.5E-28 1.2E-32 229.4 17.0 170 139-342 2-171 (172)
57 3v30_A DNA-binding protein rfx 100.0 9.9E-28 3.4E-32 226.3 16.8 168 1-278 3-171 (172)
58 2rfm_A Putative ankyrin repeat 100.0 1.1E-27 3.7E-32 230.4 16.7 163 132-329 28-190 (192)
59 4hbd_A KN motif and ankyrin re 100.0 2.8E-28 9.6E-33 249.0 13.3 163 132-329 104-273 (276)
60 2rfm_A Putative ankyrin repeat 99.9 2.7E-27 9.2E-32 227.6 16.7 163 26-265 28-190 (192)
61 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.3E-27 1.5E-31 219.3 17.3 156 2-267 7-162 (162)
62 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.9E-27 1.7E-31 219.0 17.3 158 138-331 4-162 (162)
63 3v31_A Ankyrin repeat family A 99.9 6.3E-27 2.1E-31 219.7 17.0 160 138-332 2-161 (167)
64 3f6q_A Integrin-linked protein 99.9 5.1E-27 1.7E-31 223.2 16.3 169 137-339 3-171 (179)
65 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.8E-26 6.2E-31 217.3 19.7 154 2-265 16-169 (169)
66 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.6E-26 5.5E-31 217.6 19.0 159 136-329 11-169 (169)
67 3v31_A Ankyrin repeat family A 99.9 1.6E-26 5.6E-31 216.8 18.3 157 1-267 4-160 (167)
68 2vge_A RELA-associated inhibit 99.9 1E-28 3.5E-33 245.2 2.0 191 122-350 1-199 (229)
69 3twr_A Tankyrase-2; ankyrin re 99.9 1.1E-26 3.7E-31 217.6 15.3 161 135-330 4-164 (165)
70 2vge_A RELA-associated inhibit 99.9 7.7E-29 2.6E-33 246.0 -0.8 199 16-293 1-206 (229)
71 3f6q_A Integrin-linked protein 99.9 5.6E-26 1.9E-30 216.0 18.2 160 2-238 7-167 (179)
72 1awc_B Protein (GA binding pro 99.9 8.3E-26 2.8E-30 209.0 18.9 149 2-227 4-152 (153)
73 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.1E-28 1.4E-32 242.2 1.9 158 125-287 24-193 (239)
74 1ycs_B 53BP2, P53BP2; ankyrin 99.9 8.2E-27 2.8E-31 232.8 10.4 180 137-352 3-194 (239)
75 1awc_B Protein (GA binding pro 99.9 1.5E-25 5.1E-30 207.3 17.3 144 139-287 2-145 (153)
76 2aja_A Ankyrin repeat family p 99.9 5.7E-29 2E-33 264.5 -6.6 172 2-237 67-253 (376)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.7E-25 9.3E-30 205.9 18.1 150 2-229 4-154 (156)
78 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.1E-25 7.1E-30 206.7 17.0 144 139-287 2-145 (156)
79 3twr_A Tankyrase-2; ankyrin re 99.9 6.6E-25 2.2E-29 205.4 16.7 147 169-348 4-150 (165)
80 1bi7_B P16INK4A, MTS1, multipl 99.9 1.8E-24 6.1E-29 200.9 11.7 145 168-347 7-152 (156)
81 1d9s_A Cyclin-dependent kinase 99.9 4.7E-24 1.6E-28 193.2 14.2 120 164-287 3-123 (136)
82 2aja_A Ankyrin repeat family p 99.9 1.3E-26 4.4E-31 246.4 -5.8 275 8-358 42-340 (376)
83 1d9s_A Cyclin-dependent kinase 99.9 5.9E-24 2E-28 192.6 12.2 134 129-267 2-136 (136)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 5.4E-24 1.8E-28 197.6 11.0 145 133-282 6-151 (156)
85 3t8k_A Uncharacterized protein 99.9 9.2E-24 3.1E-28 202.4 10.4 160 173-362 6-179 (186)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 9.5E-23 3.3E-27 184.6 14.8 122 1-196 15-136 (136)
87 3t8k_A Uncharacterized protein 99.9 4.5E-24 1.5E-28 204.5 6.3 162 139-337 6-185 (186)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.4E-22 1.8E-26 175.9 16.7 113 172-287 1-113 (126)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.8E-22 1.6E-26 176.2 15.8 124 1-198 3-126 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 7.6E-22 2.6E-26 178.6 14.5 112 173-287 14-125 (136)
91 3aaa_C Myotrophin, protein V-1 99.9 1.2E-21 4.3E-26 173.8 13.6 117 205-354 4-120 (123)
92 3c5r_A BARD-1, BRCA1-associate 99.9 1.8E-21 6.1E-26 176.2 14.1 112 204-347 6-117 (137)
93 3deo_A Signal recognition part 99.9 6.5E-22 2.2E-26 188.7 11.7 136 1-230 45-181 (183)
94 3ui2_A Signal recognition part 99.9 9.3E-22 3.2E-26 196.8 12.5 106 2-182 47-153 (244)
95 3deo_A Signal recognition part 99.9 9.6E-23 3.3E-27 194.5 3.3 163 7-264 7-181 (183)
96 3c5r_A BARD-1, BRCA1-associate 99.9 6.4E-22 2.2E-26 179.2 7.8 131 129-264 1-131 (137)
97 2b0o_E UPLC1; arfgap, structur 99.8 2.4E-21 8.4E-26 200.0 12.0 138 2-221 153-299 (301)
98 3ehr_A Osteoclast-stimulating 99.8 1.1E-21 3.6E-26 193.1 8.0 137 170-339 70-206 (222)
99 1dcq_A PYK2-associated protein 99.8 4.2E-20 1.4E-24 188.5 19.3 135 173-347 130-271 (278)
100 2b0o_E UPLC1; arfgap, structur 99.8 9.4E-21 3.2E-25 195.6 14.2 141 172-350 150-297 (301)
101 3aaa_C Myotrophin, protein V-1 99.8 5.3E-21 1.8E-25 169.7 10.6 110 1-184 8-117 (123)
102 3ui2_A Signal recognition part 99.8 2.3E-20 7.9E-25 186.7 11.7 143 137-331 43-185 (244)
103 3ehr_A Osteoclast-stimulating 99.8 9E-21 3.1E-25 186.4 8.1 138 135-276 69-207 (222)
104 3lvq_E ARF-GAP with SH3 domain 99.8 2.9E-19 9.8E-24 197.6 15.9 136 174-347 133-275 (497)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3E-19 1E-23 150.1 12.2 93 207-331 1-93 (93)
106 3jue_A Arfgap with coiled-coil 99.8 2.4E-19 8.2E-24 189.7 14.3 142 2-217 201-346 (368)
107 3lvq_E ARF-GAP with SH3 domain 99.8 2.8E-19 9.5E-24 197.7 14.5 134 2-217 134-276 (497)
108 3jue_A Arfgap with coiled-coil 99.8 2.6E-19 8.8E-24 189.5 13.5 149 168-348 194-346 (368)
109 2l6b_A NR1C; ankyrin, consensu 99.8 1.4E-19 4.6E-24 158.5 6.9 108 204-343 5-112 (115)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.2E-18 4.1E-23 146.4 12.3 90 1-164 3-92 (93)
111 1dcq_A PYK2-associated protein 99.8 1.7E-18 5.7E-23 176.6 15.7 124 2-199 132-264 (278)
112 2l6b_A NR1C; ankyrin, consensu 99.7 2.4E-18 8.1E-23 150.5 8.5 109 168-279 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.6 7.5E-16 2.6E-20 133.7 11.0 83 204-287 20-102 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 7.2E-16 2.5E-20 133.8 10.7 67 125-192 43-109 (110)
115 2yho_A E3 ubiquitin-protein li 99.3 1.2E-12 4.1E-17 105.7 4.8 64 466-532 6-71 (79)
116 4ic3_A E3 ubiquitin-protein li 99.2 4.9E-12 1.7E-16 101.0 3.3 56 469-524 15-72 (74)
117 2ecg_A Baculoviral IAP repeat- 99.1 1.5E-11 5.2E-16 98.4 2.1 52 473-524 20-73 (75)
118 2ea5_A Cell growth regulator w 99.1 1.9E-11 6.6E-16 95.5 2.5 49 477-525 14-64 (68)
119 4ap4_A E3 ubiquitin ligase RNF 99.0 6E-11 2E-15 106.3 2.6 97 399-520 8-126 (133)
120 2vje_B MDM4 protein; proto-onc 99.0 1.6E-10 5.4E-15 88.9 2.8 50 476-525 5-62 (63)
121 2vje_A E3 ubiquitin-protein li 98.9 3.9E-10 1.3E-14 87.0 1.9 50 476-525 6-63 (64)
122 3t6p_A Baculoviral IAP repeat- 98.8 2.5E-09 8.5E-14 110.5 4.6 57 468-524 285-343 (345)
123 2ecn_A Ring finger protein 141 98.5 1.6E-08 5.6E-13 79.5 0.9 49 472-521 9-62 (70)
124 4ayc_A E3 ubiquitin-protein li 98.5 8.7E-08 3E-12 86.2 5.5 46 475-520 50-100 (138)
125 2ea5_A Cell growth regulator w 98.5 4.9E-08 1.7E-12 76.0 2.8 48 399-447 16-63 (68)
126 2ysl_A Tripartite motif-contai 98.5 3.8E-08 1.3E-12 78.0 1.8 48 472-519 14-69 (73)
127 2d8t_A Dactylidin, ring finger 98.4 9.5E-08 3.2E-12 75.3 2.8 44 476-519 13-61 (71)
128 2vje_B MDM4 protein; proto-onc 98.4 1.3E-07 4.4E-12 72.5 3.0 47 399-446 8-60 (63)
129 1bor_A Transcription factor PM 98.4 1E-07 3.6E-12 71.2 1.9 44 476-519 4-49 (56)
130 2egp_A Tripartite motif-contai 98.4 1.1E-07 3.7E-12 76.6 1.9 47 473-519 7-65 (79)
131 3fl2_A E3 ubiquitin-protein li 98.3 2.3E-07 7.8E-12 81.8 4.1 48 472-519 46-99 (124)
132 1e4u_A Transcriptional repress 98.3 6.2E-08 2.1E-12 77.5 0.2 51 473-523 6-66 (78)
133 2djb_A Polycomb group ring fin 98.3 1.6E-07 5.4E-12 74.2 2.4 49 472-520 9-63 (72)
134 2vje_A E3 ubiquitin-protein li 98.3 2.2E-07 7.7E-12 71.4 3.1 47 399-446 9-61 (64)
135 1chc_A Equine herpes virus-1 r 98.3 3.2E-07 1.1E-11 71.5 3.8 45 477-521 4-54 (68)
136 3lrq_A E3 ubiquitin-protein li 98.3 1.9E-07 6.6E-12 78.9 2.1 48 472-519 16-70 (100)
137 2ecw_A Tripartite motif-contai 98.3 2.9E-07 9.9E-12 75.1 3.0 47 473-519 14-71 (85)
138 2ecy_A TNF receptor-associated 98.3 1.9E-07 6.5E-12 72.3 1.5 47 473-519 10-62 (66)
139 1jm7_A BRCA1, breast cancer ty 98.3 4.4E-07 1.5E-11 78.3 4.0 54 466-519 9-70 (112)
140 2ea6_A Ring finger protein 4; 98.3 1.8E-07 6E-12 73.1 1.3 45 475-519 12-68 (69)
141 2ct2_A Tripartite motif protei 98.3 2.2E-07 7.5E-12 76.4 1.8 47 473-519 10-68 (88)
142 2yho_A E3 ubiquitin-protein li 98.3 3.9E-07 1.3E-11 73.2 3.1 47 400-447 20-66 (79)
143 2ecv_A Tripartite motif-contai 98.2 3E-07 1E-11 75.0 2.3 47 473-519 14-71 (85)
144 2csy_A Zinc finger protein 183 98.2 3.8E-07 1.3E-11 73.8 2.8 45 475-519 12-61 (81)
145 2ecm_A Ring finger and CHY zin 98.2 4.2E-07 1.4E-11 67.5 2.3 42 477-518 4-54 (55)
146 1g25_A CDK-activating kinase a 98.2 2.4E-07 8.1E-12 71.5 0.8 43 478-520 3-56 (65)
147 2xeu_A Ring finger protein 4; 98.2 2.9E-07 9.8E-12 70.7 1.3 43 478-520 3-57 (64)
148 2y1n_A E3 ubiquitin-protein li 98.2 1E-06 3.5E-11 91.4 5.5 45 477-521 331-381 (389)
149 2yur_A Retinoblastoma-binding 98.2 7.5E-07 2.6E-11 70.7 2.7 47 472-518 9-63 (74)
150 1z6u_A NP95-like ring finger p 98.1 9.3E-07 3.2E-11 80.4 3.3 48 473-520 73-126 (150)
151 1t1h_A Gspef-atpub14, armadill 98.1 1.1E-06 3.6E-11 70.5 3.2 45 475-519 5-55 (78)
152 3ng2_A RNF4, snurf, ring finge 98.1 4.7E-07 1.6E-11 71.1 1.1 45 476-520 8-64 (71)
153 2y43_A E3 ubiquitin-protein li 98.1 1.3E-06 4.6E-11 73.5 3.6 48 472-519 16-69 (99)
154 2ecg_A Baculoviral IAP repeat- 98.1 7.7E-07 2.6E-11 70.8 1.8 46 400-446 27-72 (75)
155 4ic3_A E3 ubiquitin-protein li 98.1 1E-06 3.5E-11 69.9 2.4 46 400-446 26-71 (74)
156 1iym_A EL5; ring-H2 finger, ub 98.1 1.4E-06 4.7E-11 64.6 3.0 44 475-518 2-54 (55)
157 2ckl_A Polycomb group ring fin 98.1 1.2E-06 4.2E-11 75.0 2.8 48 472-519 9-62 (108)
158 3l11_A E3 ubiquitin-protein li 98.1 9.7E-07 3.3E-11 76.6 2.1 45 475-519 12-62 (115)
159 1v87_A Deltex protein 2; ring- 98.1 4.2E-07 1.5E-11 78.7 -0.2 56 463-519 11-94 (114)
160 1jm7_B BARD1, BRCA1-associated 98.1 1.7E-06 5.7E-11 75.3 3.6 47 472-518 16-66 (117)
161 2kiz_A E3 ubiquitin-protein li 98.1 1.3E-06 4.4E-11 68.2 2.6 47 475-521 11-65 (69)
162 3ztg_A E3 ubiquitin-protein li 98.0 9.6E-07 3.3E-11 73.3 1.0 46 473-518 8-61 (92)
163 2l0b_A E3 ubiquitin-protein li 98.0 1.7E-06 5.7E-11 71.7 2.3 44 476-519 38-89 (91)
164 2ecj_A Tripartite motif-contai 98.0 1.1E-06 3.7E-11 65.9 1.0 41 473-513 10-58 (58)
165 2ysj_A Tripartite motif-contai 98.0 2.2E-06 7.7E-11 65.5 2.6 42 472-513 14-63 (63)
166 2ep4_A Ring finger protein 24; 98.0 1.4E-06 4.9E-11 68.9 1.5 49 473-521 10-66 (74)
167 3hct_A TNF receptor-associated 98.0 1.8E-06 6E-11 75.3 2.0 48 473-520 13-66 (118)
168 2ect_A Ring finger protein 126 98.0 3.1E-06 1.1E-10 67.7 3.2 46 475-520 12-65 (78)
169 1x4j_A Ring finger protein 38; 97.9 2.3E-06 7.7E-11 68.0 1.6 44 476-519 21-72 (75)
170 1rmd_A RAG1; V(D)J recombinati 97.9 4.4E-06 1.5E-10 72.5 3.3 46 474-519 19-70 (116)
171 2kr4_A Ubiquitin conjugation f 97.9 3.5E-06 1.2E-10 68.7 1.9 48 472-519 8-60 (85)
172 3knv_A TNF receptor-associated 97.9 2E-06 6.7E-11 77.4 0.2 46 473-518 26-77 (141)
173 2kre_A Ubiquitin conjugation f 97.8 4.9E-06 1.7E-10 69.9 2.3 48 472-519 23-75 (100)
174 2ckl_B Ubiquitin ligase protei 97.8 6.1E-06 2.1E-10 76.4 2.7 46 474-519 50-102 (165)
175 1wgm_A Ubiquitin conjugation f 97.8 7.1E-06 2.4E-10 68.7 2.0 47 473-519 17-69 (98)
176 2ecl_A Ring-box protein 2; RNF 97.6 4E-05 1.4E-09 61.7 3.6 43 478-520 15-77 (81)
177 3hcs_A TNF receptor-associated 97.6 2.5E-05 8.6E-10 72.6 2.7 47 473-519 13-65 (170)
178 4ap4_A E3 ubiquitin ligase RNF 97.5 2.1E-05 7.3E-10 69.7 1.6 45 476-520 5-61 (133)
179 3t6p_A Baculoviral IAP repeat- 97.5 2.9E-05 9.8E-10 80.1 2.1 47 399-446 296-342 (345)
180 2c2l_A CHIP, carboxy terminus 97.3 7.8E-05 2.7E-09 75.1 3.1 43 477-519 207-255 (281)
181 2f42_A STIP1 homology and U-bo 97.2 0.00026 9E-09 65.6 4.9 45 475-519 103-153 (179)
182 3dpl_R Ring-box protein 1; ubi 97.1 0.00025 8.5E-09 60.0 3.3 40 479-518 38-100 (106)
183 2yu4_A E3 SUMO-protein ligase 97.1 0.00017 5.9E-09 59.7 1.9 43 476-518 5-62 (94)
184 3htk_C E3 SUMO-protein ligase 96.9 0.00026 9E-09 68.9 2.1 46 474-519 177-232 (267)
185 3vk6_A E3 ubiquitin-protein li 96.8 0.00097 3.3E-08 54.4 4.4 51 480-530 3-62 (101)
186 1chc_A Equine herpes virus-1 r 96.5 0.0014 4.9E-08 50.3 3.4 46 399-445 6-55 (68)
187 4a0k_B E3 ubiquitin-protein li 96.5 0.0004 1.4E-08 59.7 0.0 40 479-518 49-111 (117)
188 2d8t_A Dactylidin, ring finger 96.5 0.001 3.4E-08 51.8 2.1 43 399-443 16-62 (71)
189 4ayc_A E3 ubiquitin-protein li 96.5 0.0012 4E-08 58.9 2.8 43 400-444 55-101 (138)
190 2ysl_A Tripartite motif-contai 96.4 0.0013 4.4E-08 51.4 2.5 42 399-442 21-69 (73)
191 1wim_A KIAA0161 protein; ring 96.4 0.0008 2.7E-08 55.6 1.3 40 477-516 4-61 (94)
192 2ecn_A Ring finger protein 141 96.1 0.0016 5.4E-08 50.4 1.5 43 398-443 15-61 (70)
193 2djb_A Polycomb group ring fin 96.1 0.0039 1.3E-07 48.5 3.7 45 399-444 16-64 (72)
194 2ea6_A Ring finger protein 4; 96.1 0.0021 7.3E-08 49.3 2.1 44 398-442 15-68 (69)
195 1g25_A CDK-activating kinase a 96.1 0.0028 9.6E-08 48.2 2.6 42 400-442 5-55 (65)
196 2ecm_A Ring finger and CHY zin 96.0 0.0028 9.7E-08 46.3 2.4 42 399-441 6-54 (55)
197 2y1n_A E3 ubiquitin-protein li 96.0 0.0026 9.1E-08 65.9 2.8 46 399-446 333-383 (389)
198 2csy_A Zinc finger protein 183 96.0 0.0042 1.4E-07 49.6 3.3 43 398-442 15-61 (81)
199 2kiz_A E3 ubiquitin-protein li 95.9 0.0066 2.2E-07 46.7 4.1 46 399-445 15-66 (69)
200 2ct2_A Tripartite motif protei 95.9 0.0035 1.2E-07 50.7 2.7 43 399-442 16-68 (88)
201 1e4u_A Transcriptional repress 95.9 0.0022 7.6E-08 50.9 1.2 45 399-444 12-64 (78)
202 2ep4_A Ring finger protein 24; 95.6 0.011 3.9E-07 46.0 4.4 49 398-447 15-69 (74)
203 3lrq_A E3 ubiquitin-protein li 95.6 0.0059 2E-07 50.9 2.8 43 399-442 23-70 (100)
204 2ecw_A Tripartite motif-contai 95.4 0.0054 1.9E-07 49.1 2.0 42 399-442 20-71 (85)
205 3fl2_A E3 ubiquitin-protein li 95.4 0.0077 2.6E-07 52.4 3.0 41 400-442 54-99 (124)
206 2y43_A E3 ubiquitin-protein li 95.4 0.0087 3E-07 49.7 3.1 42 400-442 24-69 (99)
207 3ng2_A RNF4, snurf, ring finge 95.3 0.005 1.7E-07 47.6 1.5 43 399-442 11-63 (71)
208 2ect_A Ring finger protein 126 95.3 0.0095 3.3E-07 47.0 3.1 46 398-444 15-66 (78)
209 2ecy_A TNF receptor-associated 95.3 0.0049 1.7E-07 47.0 1.3 43 398-442 15-62 (66)
210 2d8s_A Cellular modulator of i 95.3 0.011 3.8E-07 47.0 3.3 45 476-520 13-71 (80)
211 2ckl_A Polycomb group ring fin 95.3 0.0087 3E-07 50.6 2.9 44 399-443 16-63 (108)
212 2ecv_A Tripartite motif-contai 95.2 0.0049 1.7E-07 49.4 1.1 42 399-442 20-71 (85)
213 2bay_A PRE-mRNA splicing facto 95.2 0.0085 2.9E-07 45.0 2.2 42 479-520 4-51 (61)
214 2l0b_A E3 ubiquitin-protein li 95.2 0.0081 2.8E-07 49.1 2.3 43 399-442 41-89 (91)
215 1x4j_A Ring finger protein 38; 95.1 0.0086 2.9E-07 46.9 2.2 43 399-442 24-72 (75)
216 2xeu_A Ring finger protein 4; 95.1 0.0053 1.8E-07 46.3 0.8 43 399-442 4-56 (64)
217 1iym_A EL5; ring-H2 finger, ub 95.1 0.0082 2.8E-07 43.7 1.8 41 399-440 6-53 (55)
218 2ckl_B Ubiquitin ligase protei 95.0 0.013 4.4E-07 53.8 3.4 43 399-442 55-102 (165)
219 2egp_A Tripartite motif-contai 95.0 0.0038 1.3E-07 49.4 -0.3 42 399-442 13-65 (79)
220 1z6u_A NP95-like ring finger p 94.8 0.015 5E-07 52.4 3.1 42 400-443 80-126 (150)
221 1jm7_A BRCA1, breast cancer ty 94.7 0.011 3.7E-07 50.3 1.9 41 400-442 23-70 (112)
222 1bor_A Transcription factor PM 94.7 0.0035 1.2E-07 46.2 -1.2 41 400-442 8-49 (56)
223 2yur_A Retinoblastoma-binding 94.6 0.018 6.2E-07 44.9 2.9 40 399-440 16-62 (74)
224 3ztg_A E3 ubiquitin-protein li 94.4 0.016 5.3E-07 47.4 2.2 40 399-440 14-60 (92)
225 3vk6_A E3 ubiquitin-protein li 94.3 0.016 5.5E-07 47.3 1.9 46 400-446 3-53 (101)
226 1v87_A Deltex protein 2; ring- 94.0 0.027 9.2E-07 48.0 2.8 44 399-443 26-95 (114)
227 3l11_A E3 ubiquitin-protein li 93.8 0.014 4.9E-07 49.9 0.8 42 399-442 16-62 (115)
228 1jm7_B BARD1, BRCA1-associated 93.8 0.016 5.4E-07 49.8 1.0 41 400-441 24-66 (117)
229 1t1h_A Gspef-atpub14, armadill 93.6 0.036 1.2E-06 43.5 2.7 42 399-442 9-55 (78)
230 3hct_A TNF receptor-associated 93.5 0.039 1.3E-06 47.3 3.0 42 399-442 19-65 (118)
231 2ysj_A Tripartite motif-contai 93.3 0.042 1.4E-06 41.1 2.6 36 399-436 21-63 (63)
232 2ecj_A Tripartite motif-contai 93.2 0.028 9.7E-07 41.2 1.4 36 399-436 16-58 (58)
233 1rmd_A RAG1; V(D)J recombinati 92.5 0.067 2.3E-06 45.6 3.1 42 399-442 24-70 (116)
234 3knv_A TNF receptor-associated 92.0 0.047 1.6E-06 48.5 1.4 40 399-440 32-76 (141)
235 2ct0_A Non-SMC element 1 homol 91.2 0.13 4.5E-06 39.9 3.1 43 479-521 16-66 (74)
236 2ecl_A Ring-box protein 2; RNF 89.9 0.21 7.1E-06 39.6 3.2 31 412-443 43-77 (81)
237 3k1l_B Fancl; UBC, ring, RWD, 89.9 0.066 2.3E-06 54.0 0.3 45 477-521 307-375 (381)
238 3hcs_A TNF receptor-associated 89.4 0.18 6.3E-06 46.1 3.0 42 399-442 19-65 (170)
239 2kr4_A Ubiquitin conjugation f 87.6 0.33 1.1E-05 38.8 3.0 42 399-442 15-60 (85)
240 2kre_A Ubiquitin conjugation f 87.2 0.3 1E-05 40.4 2.5 42 399-442 30-75 (100)
241 1wgm_A Ubiquitin conjugation f 86.5 0.38 1.3E-05 39.6 2.8 42 399-442 23-69 (98)
242 1wim_A KIAA0161 protein; ring 86.3 0.3 1E-05 39.8 2.1 40 399-439 6-61 (94)
243 1vyx_A ORF K3, K3RING; zinc-bi 84.8 0.39 1.3E-05 35.6 1.9 43 476-518 4-58 (60)
244 2c2l_A CHIP, carboxy terminus 84.7 0.43 1.5E-05 47.2 2.7 42 399-442 209-255 (281)
245 3dpl_R Ring-box protein 1; ubi 84.0 0.58 2E-05 39.1 2.8 28 412-440 68-99 (106)
246 2ko5_A Ring finger protein Z; 83.8 0.33 1.1E-05 38.8 1.1 47 478-524 28-78 (99)
247 2cs3_A Protein C14ORF4, MY039 82.5 0.53 1.8E-05 36.2 1.7 28 478-505 15-47 (93)
248 2zet_C Melanophilin; complex, 80.6 0.69 2.4E-05 41.3 2.1 57 460-516 38-117 (153)
249 2jun_A Midline-1; B-BOX, TRIM, 78.8 0.67 2.3E-05 38.1 1.4 29 478-506 3-35 (101)
250 4a0k_B E3 ubiquitin-protein li 76.9 0.49 1.7E-05 40.3 0.0 26 414-440 81-110 (117)
251 1zbd_B Rabphilin-3A; G protein 76.7 0.62 2.1E-05 40.7 0.6 58 459-516 30-107 (134)
252 2f42_A STIP1 homology and U-bo 76.1 1.5 5.1E-05 40.3 3.0 42 399-442 107-153 (179)
253 3htk_C E3 SUMO-protein ligase 73.5 1.8 6E-05 42.1 2.9 43 399-442 182-232 (267)
254 2yu4_A E3 SUMO-protein ligase 71.7 2.2 7.6E-05 34.5 2.7 39 399-439 8-59 (94)
255 2d8s_A Cellular modulator of i 58.7 6.4 0.00022 30.8 2.9 45 399-444 16-72 (80)
256 3ql9_A Transcriptional regulat 55.1 11 0.00038 32.4 4.0 84 400-518 10-113 (129)
257 2ct0_A Non-SMC element 1 homol 49.8 9.8 0.00033 29.3 2.6 45 399-444 16-66 (74)
258 1z60_A TFIIH basal transcripti 47.2 11 0.00037 27.6 2.3 35 479-513 16-58 (59)
259 2ko5_A Ring finger protein Z; 45.6 13 0.00046 29.7 2.8 54 396-452 26-83 (99)
260 2pv0_B DNA (cytosine-5)-methyl 45.6 26 0.0009 35.9 5.8 88 393-517 45-149 (386)
261 3nw0_A Non-structural maintena 45.5 20 0.00067 34.4 4.6 59 460-520 164-230 (238)
262 2lbm_A Transcriptional regulat 42.4 35 0.0012 29.8 5.2 83 399-516 15-117 (142)
263 1weo_A Cellulose synthase, cat 36.7 24 0.00082 27.9 2.9 42 478-519 16-70 (93)
264 3pwf_A Rubrerythrin; non heme 31.7 32 0.0011 31.0 3.4 33 486-521 134-167 (170)
265 3k1l_B Fancl; UBC, ring, RWD, 30.1 16 0.00056 36.8 1.3 44 398-442 308-373 (381)
266 3i2d_A E3 SUMO-protein ligase 27.7 60 0.0021 33.0 5.0 41 479-519 250-300 (371)
267 3a1b_A DNA (cytosine-5)-methyl 26.6 1.3E+02 0.0043 26.7 6.2 84 395-517 33-135 (159)
268 2jrp_A Putative cytoplasmic pr 25.4 13 0.00044 29.1 -0.4 41 480-520 20-64 (81)
269 2jtn_A LIM domain-binding prot 23.0 40 0.0014 30.5 2.5 41 479-519 88-131 (182)
270 4fo9_A E3 SUMO-protein ligase 20.9 97 0.0033 31.4 4.9 41 479-519 216-266 (360)
271 3luu_A Uncharacterized protein 20.8 23 0.00079 28.8 0.3 23 544-566 75-98 (101)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.5e-45 Score=397.92 Aligned_cols=287 Identities=23% Similarity=0.245 Sum_probs=233.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+||||+||..|++++|++|+++|++++.+|..|.||||+|+..|+.+++++| ..+++++..+..+.++++.+.......
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 94 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN 94 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 5888888888888888888888888888888888888888888888888888 888888887777777777666443221
Q ss_pred ---------CCCCCCCCCCCCcccc---------cccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCC
Q psy2733 80 ---------RPSNLPKVEPETPMLN---------MKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNI 134 (644)
Q Consensus 80 ---------~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~ 134 (644)
...+.......+++.. +..+...+.+....+..|.||||+|+ +++|+++|++++.
T Consensus 95 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 174 (437)
T 1n11_A 95 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA 174 (437)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 1222222333333332 23444555566667788899999985 8899999999999
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHH
Q psy2733 135 QDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHV 214 (644)
Q Consensus 135 ~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~ 214 (644)
.+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.++++.|++.+++... .+..|.||||+
T Consensus 175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~ 251 (437)
T 1n11_A 175 AGKNGLTPLHVAVHHNNLDIVKLLLP-RGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA--ESVQGVTPLHL 251 (437)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGG-GTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCHHHH
Confidence 99999999999999999999999998 6888888888899999999999999999999998887655 45788999999
Q ss_pred HHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccc
Q psy2733 215 ACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKT 291 (644)
Q Consensus 215 A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~ 291 (644)
|+..|+.+++++|++. +++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++
T Consensus 252 A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v 327 (437)
T 1n11_A 252 AAQEGHAEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV 327 (437)
T ss_dssp HHHTTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHH
T ss_pred HHHCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHH
Confidence 9999999999999987 788999999999999999999999999999999999999999999999999998885433
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-44 Score=393.11 Aligned_cols=316 Identities=20% Similarity=0.217 Sum_probs=283.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++| .++++++..+..+.++++.+.......
T Consensus 48 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~ 127 (437)
T 1n11_A 48 ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVE 127 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 5999999999999999999999999999999999999999999999999999 999999998888888888776554322
Q ss_pred C---------CCCCCCCCCCCccc---------ccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCC
Q psy2733 80 R---------PSNLPKVEPETPML---------NMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNI 134 (644)
Q Consensus 80 ~---------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~ 134 (644)
. ..........+++. .++++...+.+....+..|.|||++|+ +++|+++|++++.
T Consensus 128 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 207 (437)
T 1n11_A 128 TVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS 207 (437)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCC
T ss_pred HHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 1 11111222223322 245566677777888899999999996 9999999999999
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHH
Q psy2733 135 QDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHV 214 (644)
Q Consensus 135 ~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~ 214 (644)
.+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++.+++... .+..|.||||+
T Consensus 208 ~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~g~t~L~~ 284 (437)
T 1n11_A 208 PAWNGYTPLHIAAKQNQVEVARSLLQ-YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL--GNKSGLTPLHL 284 (437)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC--CCTTCCCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCC--CCCCCCCHHHH
Confidence 99999999999999999999999999 7999999999999999999999999999999999987765 56789999999
Q ss_pred HHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCccccccc
Q psy2733 215 ACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPIT 294 (644)
Q Consensus 215 A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~ 294 (644)
|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..++
T Consensus 285 A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~------- 356 (437)
T 1n11_A 285 VAQEGHVPVADVLIKH-GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGH------- 356 (437)
T ss_dssp HHHHTCHHHHHHHHHH-TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-------
T ss_pred HHHcCCHHHHHHHHhC-CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCCh-------
Confidence 9999999999999998 89999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCc
Q psy2733 295 REKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTS 351 (644)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~ 351 (644)
.+++++|+++|++++.+|.+|+|||++|.+.+.
T Consensus 357 ------------------------~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 357 ------------------------TDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp ------------------------HHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTC
T ss_pred ------------------------HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCc
Confidence 779999999999999999999999999996653
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.4e-41 Score=357.54 Aligned_cols=271 Identities=21% Similarity=0.246 Sum_probs=233.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCC-CCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDA-GDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~-G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
||||.||+.|++++|++||++|+++|.+|.. |+||||+|+..|+.++|++| .+|++++.
T Consensus 27 t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~------------------- 87 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL------------------- 87 (337)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------------------
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhh-------------------
Confidence 7999999999999999999999999998764 99999999999999999999 99999887
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE 152 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~ 152 (644)
.+..+.++++.+. +..++..+++++..|..|.||||+|+..|+.
T Consensus 88 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~ 138 (337)
T 4g8k_A 88 -----------------------------RKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 138 (337)
T ss_dssp -----------------------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred -----------------------------hccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence 6677777777774 7788899999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcccc----------CCCCCcHHHHHHHcCCHHHHHHHHHh-cCCccCCcCCCCCchHHHHHHhcCc-
Q psy2733 153 EIQLLLLSHPEVNLYLE----------NSKGFNILNYAVLRGNMKVTEKILAL-NRNLATVPKTSDGFTPLHVACFNDH- 220 (644)
Q Consensus 153 ~iv~~Ll~~~~~~~~~~----------d~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~d~~g~T~Lh~A~~~g~- 220 (644)
+++++|++ .|++++.. +..|.||||+|+..|+.+++++|++. ++++.. .+..|.|+||.++..+.
T Consensus 139 ~~~~~ll~-~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~--~d~~g~t~l~~~~~~~~~ 215 (337)
T 4g8k_A 139 KALKFLYK-RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA--CDNMGRNALIHALLSSDD 215 (337)
T ss_dssp HHHHHHHH-TTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTC--CCTTSCCHHHHHHHHSCT
T ss_pred HHHHHHHH-cCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCc--cCCCCCcHHHHHHHHcCc
Confidence 99999998 67777654 45688999999999999999999964 666654 56789999998776443
Q ss_pred ---HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCcHHHHHHHcCCccccccccc
Q psy2733 221 ---IEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLR-DVALDIQDIDGNGLLHFLFIKKNFYKTPITRE 296 (644)
Q Consensus 221 ---~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~-gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~ 296 (644)
..++++|++. |+++|.+|..|+||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+..|+
T Consensus 216 ~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~--------- 285 (337)
T 4g8k_A 216 SDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL--------- 285 (337)
T ss_dssp TTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTC---------
T ss_pred ccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCC---------
Confidence 4678888887 899999999999999999999999999999975 89999999999999999999988
Q ss_pred CCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCC--cHHHHHHHHh
Q psy2733 297 KSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDT--SLLNEIMEHA 360 (644)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~--~~~~~l~~~~ 360 (644)
.+++++|+++||++|.+ +||++|++.+ ++++.|++.+
T Consensus 286 ----------------------~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~G 324 (337)
T 4g8k_A 286 ----------------------KKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHG 324 (337)
T ss_dssp ----------------------HHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTT
T ss_pred ----------------------HHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCc
Confidence 77999999999998754 5999999654 3455555544
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.5e-41 Score=342.90 Aligned_cols=254 Identities=22% Similarity=0.246 Sum_probs=238.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCccc-CCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYP-DDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKV 78 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~-d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~ 78 (644)
+||||+|++.|++++|++|++.|++++.+ +..|+||||+|+..|+.+++++| ..+++++.
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------ 67 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL------------------ 67 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc------------------
Confidence 48999999999999999999999999988 88899999999999999999999 88888876
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy2733 79 QRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGF 151 (644)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~ 151 (644)
.+..|.||||+|+ +++|+++|++++..|..|.||||+|+..|+
T Consensus 68 ------------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 117 (285)
T 1wdy_A 68 ------------------------------RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 117 (285)
T ss_dssp ------------------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred ------------------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC
Confidence 7778999999996 999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcccc----------CCCCCcHHHHHHHcCCHHHHHHHHHh-cCCccCCcCCCCCchHHHHHHhcCc
Q psy2733 152 EEIQLLLLSHPEVNLYLE----------NSKGFNILNYAVLRGNMKVTEKILAL-NRNLATVPKTSDGFTPLHVACFNDH 220 (644)
Q Consensus 152 ~~iv~~Ll~~~~~~~~~~----------d~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~d~~g~T~Lh~A~~~g~ 220 (644)
.+++++|++ .+++++.. +..|.||||+|+..|+.+++++|++. +.++.. .+..|.||||+|+..++
T Consensus 118 ~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~g~t~l~~a~~~~~ 194 (285)
T 1wdy_A 118 VKALKFLYK-RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA--CDNMGRNALIHALLSSD 194 (285)
T ss_dssp HHHHHHHHH-TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTC--CCTTSCCHHHHHHHCSC
T ss_pred HHHHHHHHH-hCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCc--cCCCCCCHHHHHHHccc
Confidence 999999999 78888877 78899999999999999999999997 766554 56889999999999999
Q ss_pred ----HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCcccCCCCcHHHHHHHcCCcccccccc
Q psy2733 221 ----IEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLML-RDVALDIQDIDGNGLLHFLFIKKNFYKTPITR 295 (644)
Q Consensus 221 ----~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~-~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~ 295 (644)
.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++
T Consensus 195 ~~~~~~i~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~-------- 265 (285)
T 1wdy_A 195 DSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL-------- 265 (285)
T ss_dssp TTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTC--------
T ss_pred cchHHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCc--------
Confidence 9999999998 89999999999999999999999999999999 899999999999999999999998
Q ss_pred cCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCC
Q psy2733 296 EKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENN 337 (644)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~ 337 (644)
.+++++|+++||+++.+|.
T Consensus 266 -----------------------~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 266 -----------------------KKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp -----------------------HHHHHHHHHHSSCSCCSSC
T ss_pred -----------------------HHHHHHHHHcCCCCCcccc
Confidence 7799999999999999874
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.1e-40 Score=345.76 Aligned_cols=273 Identities=25% Similarity=0.225 Sum_probs=245.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHC-CCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLAR-GACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKV 78 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~-Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~ 78 (644)
+|+||.||+.|+.+.|+.|+.. |++++.+|..|+||||+|+..|+.++|++| ..+++++.
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------ 86 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA------------------ 86 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------
Confidence 3799999999999999999876 899999999999999999999999999999 88888877
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy2733 79 QRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGF 151 (644)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~ 151 (644)
.+..|.||||+|+ +++|+++|++++..|..|.||||+|+..|+
T Consensus 87 ------------------------------~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 87 ------------------------------KDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR 136 (351)
T ss_dssp ------------------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred ------------------------------cCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 7788999999996 999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCccccCCCCCcHHHHH---------------------HHcCCHHHHHHHHHhcCCccCCcCCCCCch
Q psy2733 152 EEIQLLLLSHPEVNLYLENSKGFNILNYA---------------------VLRGNMKVTEKILALNRNLATVPKTSDGFT 210 (644)
Q Consensus 152 ~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A---------------------~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T 210 (644)
.+++++|++ .|++++..+..|.+|+++| +..++.+.++.++....... ..+..|.|
T Consensus 137 ~~~v~~Ll~-~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~t 213 (351)
T 3utm_A 137 VEVCSLLLS-HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINF--KQPQSHET 213 (351)
T ss_dssp HHHHHHHHH-TTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTC--CCTTTCCC
T ss_pred HHHHHHHHH-cCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccc--cCCCCCCC
Confidence 999999999 7999999999999998765 45566666666666554322 24578999
Q ss_pred HHHHHHhc---CcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 211 PLHVACFN---DHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 211 ~Lh~A~~~---g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
|||+|+.. +..+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 214 ~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~ 292 (351)
T 3utm_A 214 ALHCAVASLHPKRKQVAELLLRK-GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH 292 (351)
T ss_dssp HHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHhCccHHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 99999999 668999999998 89999999999999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCcHHHHHHH
Q psy2733 288 FYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTSLLNEIME 358 (644)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~~ 358 (644)
.+++++|+++|++++.+|..|+||+++|. ..+.+.+.+
T Consensus 293 -------------------------------~~~v~~Ll~~gad~~~~~~~g~tal~~a~--~~~~~~l~~ 330 (351)
T 3utm_A 293 -------------------------------LQTCRLLLSYGSDPSIISLQGFTAAQMGN--EAVQQILSE 330 (351)
T ss_dssp -------------------------------HHHHHHHHHTTCCTTCCCTTSCCHHHHSC--HHHHHHHHH
T ss_pred -------------------------------HHHHHHHHHcCCCCCCcCCCCCChhhhhh--HHHHHHHHh
Confidence 78999999999999999999999999995 334444443
No 6
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=339.82 Aligned_cols=249 Identities=19% Similarity=0.228 Sum_probs=211.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCC-----------CCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhh
Q psy2733 1 KTLLHILAYQGCVEELNILLARG-----------ACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKER 69 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~G-----------a~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~ 69 (644)
+|+||+||..|+.+.+..++..+ ..++.+|..|+||||+|+..|+.+++++
T Consensus 16 ~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~------------------ 77 (285)
T 3d9h_A 16 PRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRN------------------ 77 (285)
T ss_dssp --------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHH------------------
T ss_pred HHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHH------------------
Confidence 58999999999988777766543 2356789999999999999999999987
Q ss_pred hhccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy2733 70 HRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAK 149 (644)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~ 149 (644)
|++.|+++|..|.+|+||||+|+..
T Consensus 78 -------------------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~ 102 (285)
T 3d9h_A 78 -------------------------------------------------------LISQGWAVNIITADHVSPLHEACLG 102 (285)
T ss_dssp -------------------------------------------------------HHHTTCCSCEECTTCCCHHHHHHHT
T ss_pred -------------------------------------------------------HHHCCCCCCCcCCCCCCHHHHHHHC
Confidence 7788888999999999999999999
Q ss_pred CCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHH
Q psy2733 150 GFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVE 229 (644)
Q Consensus 150 g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~ 229 (644)
|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.++++.. +..|.||||+|+..|+.+++++|++
T Consensus 103 g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~ 178 (285)
T 3d9h_A 103 GHLSCVKILLK-HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP---ESDLASPIHEAARRGHVECVNSLIA 178 (285)
T ss_dssp TCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC---SCTTSCHHHHHHHHTCHHHHHHHHH
T ss_pred CcHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999 7999999999999999999999999999999999987654 2569999999999999999999999
Q ss_pred hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcC
Q psy2733 230 KYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVG 309 (644)
Q Consensus 230 ~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (644)
. |++++.+|..|.||||+|+..|+.+++++|++.|++++. |..|+||||+|+..++
T Consensus 179 ~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~---------------------- 234 (285)
T 3d9h_A 179 Y-GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTAS---------------------- 234 (285)
T ss_dssp T-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTC----------------------
T ss_pred C-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCC----------------------
Confidence 8 899999999999999999999999999999999999995 8999999999999998
Q ss_pred CCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCcHHHHHHHH
Q psy2733 310 GPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTSLLNEIMEH 359 (644)
Q Consensus 310 ~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~~~ 359 (644)
.+++++|+++|++++.+|.+|+|||++|+++.++++.|++.
T Consensus 235 ---------~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 235 ---------EELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQLFLER 275 (285)
T ss_dssp ---------HHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTSHHHHHHHHH
T ss_pred ---------HHHHHHHHHCCCCCCCcCCCCCCHHHHhcCccHHHHHHHHh
Confidence 77999999999999999999999999999778777777765
No 7
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=335.26 Aligned_cols=237 Identities=21% Similarity=0.253 Sum_probs=219.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+||..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~----------------------------- 54 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKI----------------------------- 54 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHH-----------------------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHH-----------------------------
Confidence 699999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++..|..|+||||+|+..|+.+++++|++
T Consensus 55 --------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 90 (261)
T 2xai_A 55 --------------------------------------------LLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQ 90 (261)
T ss_dssp --------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------------------------------------------HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 788888999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCC
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDL 240 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~ 240 (644)
.|++++. +..|.||||+|+..|+.++++.|++.++++.. .+..|.||||+|+..|+.+++++|++. |++++. |.
T Consensus 91 -~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~ 164 (261)
T 2xai_A 91 -HGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDH--KISHLGTPLYLACENQQRACVKKLLES-GADVNQ-GK 164 (261)
T ss_dssp -TTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CBTTTBCHHHHHHHTTCHHHHHHHHHH-TCCTTC-CB
T ss_pred -CCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc--CCCCCCCHHHHHHHhCCHHHHHHHHHc-CCCCCC-CC
Confidence 7888875 45699999999999999999999999988765 567899999999999999999999998 899995 88
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHH
Q psy2733 241 KKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLA 320 (644)
Q Consensus 241 ~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (644)
.|.||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..+.
T Consensus 165 ~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~~--------------------------------- 211 (261)
T 2xai_A 165 GQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPESP--------------------------------- 211 (261)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTCT---------------------------------
T ss_pred CCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccccc---------------------------------
Confidence 99999999999999999999999999999999999999999996655
Q ss_pred HHHHHHHcCCCC--------CCCCCCCCCcchhhhcC
Q psy2733 321 VFLFLVKHGAPL--------SLENNNRQKPLDLILED 349 (644)
Q Consensus 321 iv~~Ll~~Gadi--------~~~n~~G~TpL~~A~~~ 349 (644)
++++|+++++.. +.+|..|+||+|+|.+.
T Consensus 212 ~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~ 248 (261)
T 2xai_A 212 LAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKL 248 (261)
T ss_dssp HHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGS
T ss_pred HHHHHHhccCCccHHHHHHHHHHHHhchhccccCccc
Confidence 889999988754 46899999999999843
No 8
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.1e-38 Score=333.29 Aligned_cols=250 Identities=23% Similarity=0.268 Sum_probs=226.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+||||+||..|+.++|++||++|++++.+|..+.+|+++++..+...++..+ ..+++++.
T Consensus 60 ~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 120 (337)
T 4g8k_A 60 WTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNE------------------- 120 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-------------------
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhh-------------------
Confidence 6999999999999999999999999999999999999999999999999998 88877776
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCC----------CCCCCcH
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQ----------DNNQDTP 142 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~----------d~~G~Tp 142 (644)
.+..|.||+++|+ +++|+++|++++.. +..|.||
T Consensus 121 -----------------------------~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~ 171 (337)
T 4g8k_A 121 -----------------------------CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 171 (337)
T ss_dssp -----------------------------BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCH
T ss_pred -----------------------------hccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcH
Confidence 7788999999996 89999999998754 3468999
Q ss_pred HHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCC----HHHHHHHHHhcCCccCCcCCCCCchHHHHHHhc
Q psy2733 143 MHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGN----MKVTEKILALNRNLATVPKTSDGFTPLHVACFN 218 (644)
Q Consensus 143 L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~ 218 (644)
||+|+..|+.+++++|+++.|++++..+..|.|+|++++..+. ..++++|++.|++++. .|..|+||||+|+..
T Consensus 172 L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~--~d~~g~t~L~~a~~~ 249 (337)
T 4g8k_A 172 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV--RGERGKTPLILAVEK 249 (337)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTC--CCGGGCCHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHh
Confidence 9999999999999999976799999999999999999887654 4688999999998766 568899999999999
Q ss_pred CcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCC
Q psy2733 219 DHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKS 298 (644)
Q Consensus 219 g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~ 298 (644)
|+.+++++|+...|++++.+|..|+||||+|+..|+.++|++|+++|+++|.+ +|||+|+..++
T Consensus 250 ~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~----------- 313 (337)
T 4g8k_A 250 KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYD----------- 313 (337)
T ss_dssp TCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTC-----------
T ss_pred hhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCC-----------
Confidence 99999999999878999999999999999999999999999999999999754 59999999998
Q ss_pred chhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCC
Q psy2733 299 VPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLEN 336 (644)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n 336 (644)
.+++++|+++||++|...
T Consensus 314 --------------------~~iv~~Ll~~GA~~d~~~ 331 (337)
T 4g8k_A 314 --------------------HSLVKVLLSHGAKEDFHP 331 (337)
T ss_dssp --------------------HHHHHHHHHTTCCC----
T ss_pred --------------------HHHHHHHHHCcCCCCCCC
Confidence 779999999999998753
No 9
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.1e-39 Score=344.64 Aligned_cols=241 Identities=17% Similarity=0.146 Sum_probs=219.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+||..|++++|++|++.|++++.+|..|+||||+|+..|+.++|++
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~----------------------------- 71 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKY----------------------------- 71 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHH-----------------------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHH-----------------------------
Confidence 489999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++. .+|.||||+|+..|+.+++++|++
T Consensus 72 --------------------------------------------Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~ 105 (364)
T 3ljn_A 72 --------------------------------------------LASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVE 105 (364)
T ss_dssp --------------------------------------------HHHHCCCCCC--BTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------------------------------------HHHCCCCccc--cCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5556664433 479999999999999999999999
Q ss_pred CC----CCCccc-----------------cCCCCCcHHHHHHHcC--CHHHHHHHHHhcCCccCCcCCCCCchHHHHHHh
Q psy2733 161 HP----EVNLYL-----------------ENSKGFNILNYAVLRG--NMKVTEKILALNRNLATVPKTSDGFTPLHVACF 217 (644)
Q Consensus 161 ~~----~~~~~~-----------------~d~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~ 217 (644)
. +.+++. .+..|.||||+|+..| +.+++++|++.++++.. .|..|+||||+|+.
T Consensus 106 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~--~d~~g~t~L~~A~~ 182 (364)
T 3ljn_A 106 -GAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA--KDKADETPLMRAME 182 (364)
T ss_dssp -HHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC--CCTTSCCHHHHHHH
T ss_pred -hccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHH
Confidence 5 667666 8889999999999999 99999999999988765 56889999999999
Q ss_pred cCcHHHHHHHHHhcCCC-----cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCccccc
Q psy2733 218 NDHIEIVELLVEKYKVN-----INALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTP 292 (644)
Q Consensus 218 ~g~~~~v~~Ll~~~g~~-----in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~ 292 (644)
.|+.+++++|++. |++ ++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 183 ~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~----- 256 (364)
T 3ljn_A 183 FRNREALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAM----- 256 (364)
T ss_dssp TTCHHHHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCC-----
T ss_pred cCCHHHHHHHHhc-ccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCh-----
Confidence 9999999999998 677 99999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCC------------CCCCCCCcchhhhcCCc
Q psy2733 293 ITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSL------------ENNNRQKPLDLILEDTS 351 (644)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~------------~n~~G~TpL~~A~~~~~ 351 (644)
.+++++|+++|++++. .+..|+||+++|+..+.
T Consensus 257 --------------------------~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 301 (364)
T 3ljn_A 257 --------------------------VLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPS 301 (364)
T ss_dssp --------------------------HHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHH
T ss_pred --------------------------HHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccC
Confidence 7799999999877533 56788999999995543
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.8e-38 Score=323.90 Aligned_cols=240 Identities=24% Similarity=0.268 Sum_probs=185.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC---CcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGAC---VYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEK 77 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~---~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~ 77 (644)
+||||+||..|+.++|++|++.|++ ++.+|..|+||||+|+..|+.+++++
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~-------------------------- 63 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK-------------------------- 63 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHH--------------------------
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHH--------------------------
Confidence 6999999999999999999999998 88999999999999999999999987
Q ss_pred ccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy2733 78 VQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLL 157 (644)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~ 157 (644)
|+++|++++..|..|+||||+|+..|+.+++++
T Consensus 64 -----------------------------------------------Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~ 96 (282)
T 1oy3_D 64 -----------------------------------------------LYAAGAGVLVAERGGHTALHLACRVRAHTCACV 96 (282)
T ss_dssp -----------------------------------------------HHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHH
T ss_pred -----------------------------------------------HHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHh
Confidence 788899999999999999999999999999999
Q ss_pred HhcCCCCCccc-------------cCCCCCcHHHHHHHcCCHHHHH-HHHHhcCCccCCcCCCCCchHHHHHHhcCcHHH
Q psy2733 158 LLSHPEVNLYL-------------ENSKGFNILNYAVLRGNMKVTE-KILALNRNLATVPKTSDGFTPLHVACFNDHIEI 223 (644)
Q Consensus 158 Ll~~~~~~~~~-------------~d~~g~tpL~~A~~~g~~~~v~-~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~ 223 (644)
|++ .+..... ....+.++++.+...+....+. .+...+..+ ...+..|+||||+|+..|+.++
T Consensus 97 Ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~t~L~~A~~~g~~~~ 173 (282)
T 1oy3_D 97 LLQ-PRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL--EAENYDGHTPLHVAVIHKDAEM 173 (282)
T ss_dssp HSS-SCCSSCCCC-----------------------------------CCCGGGGT--TCCCTTSCCHHHHHHHTTCHHH
T ss_pred hhc-cCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcC--CCcCCCCcCHHHHHHHcCCHHH
Confidence 999 4544321 2234566777666655433332 222223222 2356889999999999999999
Q ss_pred HHHHHHhcCCCcccCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhH
Q psy2733 224 VELLVEKYKVNINALDLK-KRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIY 302 (644)
Q Consensus 224 v~~Ll~~~g~~in~~d~~-G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~ 302 (644)
+++|++. |++++.++.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 174 v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~--------------- 237 (282)
T 1oy3_D 174 VRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN--------------- 237 (282)
T ss_dssp HHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSC---------------
T ss_pred HHHHHHc-CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCC---------------
Confidence 9999998 8999999865 9999999999999999999999999999999999999999999998
Q ss_pred HhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhc
Q psy2733 303 EEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILE 348 (644)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~ 348 (644)
.+++++|+++||+++.+|..|+|||++|..
T Consensus 238 ----------------~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 238 ----------------PILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp ----------------HHHHHHHHHTTCCCCCCC------------
T ss_pred ----------------cHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 779999999999999999999999999983
No 11
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.4e-39 Score=343.79 Aligned_cols=193 Identities=20% Similarity=0.293 Sum_probs=178.6
Q ss_pred HHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhc---CCc
Q psy2733 123 FVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALN---RNL 199 (644)
Q Consensus 123 ~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~---~~~ 199 (644)
+.|++.|+++|..|..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.+ .++
T Consensus 150 ~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~ 228 (373)
T 2fo1_E 150 KECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMK-AGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI 228 (373)
T ss_dssp HHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT
T ss_pred HHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHH-CCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh
Confidence 45679999999999999999999999999999999999 79999999999999999999999999999999877 444
Q ss_pred cCCcCCCCCchHHHHHHhcC---cHHHHHHHHHhcCCCccc--------CCCCCCCHHHHHHHcCCHHHHHHHHHCC-CC
Q psy2733 200 ATVPKTSDGFTPLHVACFND---HIEIVELLVEKYKVNINA--------LDLKKRTPLMAAVGQGQTSVINYLMLRD-VA 267 (644)
Q Consensus 200 ~~~~~d~~g~T~Lh~A~~~g---~~~~v~~Ll~~~g~~in~--------~d~~G~TpL~~Aa~~g~~~iv~~Ll~~g-ad 267 (644)
.. .+..|.||||+|+..+ +.+++++|++. |++++. .|..|.||||+|+..|+.+++++|+++| ++
T Consensus 229 ~~--~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 305 (373)
T 2fo1_E 229 EE--LDRNGMTALMIVAHNEGRDQVASAKLLVEK-GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305 (373)
T ss_dssp SC--CCTTSCCHHHHHHHSCSTTHHHHHHHHHHH-TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred hh--cCCCCCCHHHHHHHhCCcchHHHHHHHHHC-CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence 33 5688999999999998 89999999998 788886 6779999999999999999999999875 99
Q ss_pred CCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhh
Q psy2733 268 LDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 268 vn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~ 347 (644)
++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+|||++|+
T Consensus 306 ~n~~d~~g~TpL~~A~~~g~-------------------------------~~iv~~Ll~~gad~~~~d~~g~t~l~~A~ 354 (373)
T 2fo1_E 306 KDKQDEDGKTPIMLAAQEGR-------------------------------IEVVMYLIQQGASVEAVDATDHTARQLAQ 354 (373)
T ss_dssp TTCCCTTCCCHHHHHHHHTC-------------------------------HHHHHHHHHTTCCSSCCCSSSCCHHHHHH
T ss_pred ccCcCCCCCCHHHHHHHcCC-------------------------------HHHHHHHHHcCCCccCCCCCCCCHHHHHH
Confidence 99999999999999999998 78999999999999999999999999999
Q ss_pred cCC
Q psy2733 348 EDT 350 (644)
Q Consensus 348 ~~~ 350 (644)
..+
T Consensus 355 ~~g 357 (373)
T 2fo1_E 355 ANN 357 (373)
T ss_dssp HTT
T ss_pred HcC
Confidence 654
No 12
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.7e-37 Score=305.68 Aligned_cols=223 Identities=20% Similarity=0.305 Sum_probs=208.0
Q ss_pred CCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcccccccccccc
Q psy2733 24 ACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMN 103 (644)
Q Consensus 24 a~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (644)
.+++.+|..|+||||+|+..|+.+++++
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~---------------------------------------------------- 29 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHM---------------------------------------------------- 29 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHH----------------------------------------------------
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHH----------------------------------------------------
Confidence 4678899999999999999999999987
Q ss_pred cCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHc
Q psy2733 104 EDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLR 183 (644)
Q Consensus 104 ~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~ 183 (644)
|+++|++++..+..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..
T Consensus 30 ---------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~ 87 (237)
T 3b7b_A 30 ---------------------LVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIK-AGALVDPKDAEGSTCLHLAAKK 87 (237)
T ss_dssp ---------------------HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCCCCCCTTSCCHHHHHHHT
T ss_pred ---------------------HHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHc
Confidence 778888888899999999999999999999999999 7999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2733 184 GNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLML 263 (644)
Q Consensus 184 g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~ 263 (644)
|+.+++++|++.+...... .+..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++
T Consensus 88 ~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 165 (237)
T 3b7b_A 88 GHYEVVQYLLSNGQMDVNC-QDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINIRDNEENICLHWAAFSGCVDIAEILLA 165 (237)
T ss_dssp TCHHHHHHHHTTTCCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHT
T ss_pred CCHHHHHHHHhCCCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 9999999999988433222 457899999999999999999999998 89999999999999999999999999999999
Q ss_pred CCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcc
Q psy2733 264 RDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPL 343 (644)
Q Consensus 264 ~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL 343 (644)
+|++++.+|..|.||||+|+..++ .+++++|+++|++++.+|.+|+|||
T Consensus 166 ~g~~~~~~~~~g~t~L~~A~~~~~-------------------------------~~~v~~Ll~~gad~~~~d~~g~t~l 214 (237)
T 3b7b_A 166 AKCDLHAVNIHGDSPLHIAARENR-------------------------------YDCVVLFLSRDSDVTLKNKEGETPL 214 (237)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTC-------------------------------HHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred cCCCCCCcCCCCCCHHHHHHHhCC-------------------------------HhHHHHHHHcCCCCCccCCCCCCHH
Confidence 999999999999999999999998 7799999999999999999999999
Q ss_pred hhhhcCCcHH
Q psy2733 344 DLILEDTSLL 353 (644)
Q Consensus 344 ~~A~~~~~~~ 353 (644)
++|+..++..
T Consensus 215 ~~A~~~~~~~ 224 (237)
T 3b7b_A 215 QCASLNSQVW 224 (237)
T ss_dssp HHSCTTCHHH
T ss_pred HHHHHHHHHH
Confidence 9999766553
No 13
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7e-37 Score=311.77 Aligned_cols=249 Identities=19% Similarity=0.217 Sum_probs=227.9
Q ss_pred CCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcccccccccccccCCCCC
Q psy2733 31 DAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDT 109 (644)
Q Consensus 31 ~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (644)
.+|.||||+|+..|+.+++++| ..+++++. .
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------------------------------------~ 34 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNF------------------------------------------------Q 34 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTC------------------------------------------------C
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCccc------------------------------------------------c
Confidence 3578999999999999999999 88887765 3
Q ss_pred -CcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHH
Q psy2733 110 -PSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAV 181 (644)
Q Consensus 110 -~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~ 181 (644)
+..|.||||+|+ +++|+++|++++..|..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+
T Consensus 35 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~ 113 (285)
T 1wdy_A 35 EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLS-KGADVNECDFYGFTAFMEAA 113 (285)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCBCTTCCBHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCcccCCHHHHHH
Confidence 567889999996 999999999999999999999999999999999999999 79999999999999999999
Q ss_pred HcCCHHHHHHHHHhcCCccCCcC--------CCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcC
Q psy2733 182 LRGNMKVTEKILALNRNLATVPK--------TSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQG 253 (644)
Q Consensus 182 ~~g~~~~v~~Ll~~~~~~~~~~~--------d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g 253 (644)
..|+.+++++|++.++++..... +..|.||||+|+..|+.+++++|++..|++++..|..|.||||+|+..+
T Consensus 114 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 193 (285)
T 1wdy_A 114 VYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 193 (285)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCS
T ss_pred HhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcc
Confidence 99999999999999988765321 5779999999999999999999999878999999999999999999999
Q ss_pred C----HHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHH-c
Q psy2733 254 Q----TSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVK-H 328 (644)
Q Consensus 254 ~----~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~-~ 328 (644)
+ .+++++|+++|++++.+|..|+||||+|+..++ .+++++|++ .
T Consensus 194 ~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-------------------------------~~~v~~Ll~~~ 242 (285)
T 1wdy_A 194 DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKH-------------------------------LGLVQRLLEQE 242 (285)
T ss_dssp CTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTC-------------------------------HHHHHHHHHSS
T ss_pred ccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC-------------------------------HHHHHHHHhcc
Confidence 9 999999999999999999999999999999998 779999999 8
Q ss_pred CCCCCCCCCCCCCcchhhhcCC--cHHHHHHHH
Q psy2733 329 GAPLSLENNNRQKPLDLILEDT--SLLNEIMEH 359 (644)
Q Consensus 329 Gadi~~~n~~G~TpL~~A~~~~--~~~~~l~~~ 359 (644)
|++++.+|..|+||||+|++.+ ++++.|++.
T Consensus 243 g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ 275 (285)
T 1wdy_A 243 HIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275 (285)
T ss_dssp SCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCccccCCCCCcHHHHHHHcCcHHHHHHHHHc
Confidence 9999999999999999999654 344444443
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=311.96 Aligned_cols=198 Identities=21% Similarity=0.276 Sum_probs=187.3
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcC
Q psy2733 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPK 204 (644)
Q Consensus 125 Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 204 (644)
|++.|+++|..|.+|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.+++...
T Consensus 22 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--- 97 (261)
T 2xai_A 22 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLK-HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--- 97 (261)
T ss_dssp HHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC---
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---
Confidence 778888999999999999999999999999999999 7999999999999999999999999999999999988754
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHH
Q psy2733 205 TSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFI 284 (644)
Q Consensus 205 d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~ 284 (644)
+..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++. +..|+||||+|+.
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~ 175 (261)
T 2xai_A 98 ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVAR 175 (261)
T ss_dssp SCTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHH
Confidence 35699999999999999999999998 899999999999999999999999999999999999995 8899999999999
Q ss_pred cCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCcHHHHHHHH
Q psy2733 285 KKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTSLLNEIMEH 359 (644)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~~~ 359 (644)
.++ .+++++|+++|++++.+|.+|+|||++|+..+++.+.++..
T Consensus 176 ~~~-------------------------------~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~~~~~~ll~~ 219 (261)
T 2xai_A 176 TAS-------------------------------EELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQLFLER 219 (261)
T ss_dssp HTC-------------------------------HHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTCTHHHHHHHC
T ss_pred cCC-------------------------------HHHHHHHHHcCCCCCCcCCCCCChhhhccccccHHHHHHhc
Confidence 998 77999999999999999999999999999888888777764
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.4e-37 Score=313.62 Aligned_cols=211 Identities=23% Similarity=0.262 Sum_probs=173.8
Q ss_pred CcHHHHHHHcC-------------CHHHHHHHHHCCCCCcc-cCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhh
Q psy2733 1 KTLLHILAYQG-------------CVEELNILLARGACVYY-PDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIY 66 (644)
Q Consensus 1 ~TpLh~Aa~~G-------------~~e~vk~LL~~Ga~~n~-~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~ 66 (644)
+||||+|+..| +.+++++|++.|++++. .|..|+||||+|+..|+.+++++
T Consensus 11 ~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~--------------- 75 (253)
T 1yyh_A 11 FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKR--------------- 75 (253)
T ss_dssp -----------------------------------------CCCTTSCCHHHHHHHTTCHHHHHH---------------
T ss_pred CcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHH---------------
Confidence 69999999988 99999999999999865 58999999999999999999987
Q ss_pred hhhhhccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy2733 67 KERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDA 146 (644)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A 146 (644)
|+++|++++..|..|+||||+|
T Consensus 76 ----------------------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A 97 (253)
T 1yyh_A 76 ----------------------------------------------------------LLEASADANIQDNMGRTPLHAA 97 (253)
T ss_dssp ----------------------------------------------------------HHHTTCCTTCCCTTSCCHHHHH
T ss_pred ----------------------------------------------------------HHHcCCCCCCCCCCCCCHHHHH
Confidence 7888889999999999999999
Q ss_pred HHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHH
Q psy2733 147 VAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVEL 226 (644)
Q Consensus 147 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~ 226 (644)
+..|+.+++++|++....+++..+..|.||||+|+..|+.+++++|++.++++.. .|..|+||||+|+..|+.+++++
T Consensus 98 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~d~~g~t~L~~A~~~~~~~~v~~ 175 (253)
T 1yyh_A 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA--VDDLGKSALHWAAAVNNVDAAVV 175 (253)
T ss_dssp HHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTC--BCTTSCBHHHHHHHHTCHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999999954448999999999999999999999999999999988765 56789999999999999999999
Q ss_pred HHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 227 LVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 227 Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+++
T Consensus 176 Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 176 LLKN-GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp HHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCC
Confidence 9998 89999999999999999999999999999999999999999999999999999999
No 16
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=318.67 Aligned_cols=222 Identities=23% Similarity=0.299 Sum_probs=202.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+||..|+.++|++|++.|++++.+|..|+||||+|+..|+.+++++
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~----------------------------- 110 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKI----------------------------- 110 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHH-----------------------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHH-----------------------------
Confidence 699999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++..|..|.||||+|+..|+.+++++|++
T Consensus 111 --------------------------------------------Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 146 (285)
T 3d9h_A 111 --------------------------------------------LLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQ 146 (285)
T ss_dssp --------------------------------------------HHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------------------------------------------HHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHH
Confidence 778888999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCC
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDL 240 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~ 240 (644)
.+++++..+ .|.||||+|+..|+.+++++|++.++++.. .|..|+||||+|+..|+.+++++|++. |++++. |.
T Consensus 147 -~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~-~~ 220 (285)
T 3d9h_A 147 -HGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDH--KISHLGTPLYLACENQQRACVKKLLES-GADVNQ-GK 220 (285)
T ss_dssp -TTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTC--CBTTTBCHHHHHHHTTCHHHHHHHHHT-TCCTTC-CB
T ss_pred -CCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHcCcHHHHHHHHHC-CCCCCC-CC
Confidence 788887544 599999999999999999999999988765 568899999999999999999999998 899995 89
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHH
Q psy2733 241 KKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLA 320 (644)
Q Consensus 241 ~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (644)
.|.||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.+. +
T Consensus 221 ~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~---------------------------------~ 267 (285)
T 3d9h_A 221 GQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPES---------------------------------P 267 (285)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTS---------------------------------H
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCcc---------------------------------H
Confidence 9999999999999999999999999999999999999999998432 4
Q ss_pred HHHHHHHc-CCCCCC
Q psy2733 321 VFLFLVKH-GAPLSL 334 (644)
Q Consensus 321 iv~~Ll~~-Gadi~~ 334 (644)
++++|+++ |+++..
T Consensus 268 ~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 268 LAQLFLEREGASLPK 282 (285)
T ss_dssp HHHHHHHHC------
T ss_pred HHHHHHHhhccCCCC
Confidence 89999998 787653
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.8e-37 Score=304.08 Aligned_cols=211 Identities=22% Similarity=0.355 Sum_probs=201.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------------------- 62 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKY----------------------------- 62 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH-----------------------------
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHH-----------------------------
Confidence 599999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|++.|++++..+..|.||||+|+..|+.+++++|++
T Consensus 63 --------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 98 (237)
T 3b7b_A 63 --------------------------------------------LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLS 98 (237)
T ss_dssp --------------------------------------------HHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred --------------------------------------------HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 778888888899999999999999999999999999
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCC
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDL 240 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~ 240 (644)
..+.+++..+..|.||||+|+..|+.+++++|++.++++.. .+..|.||||+|+..|+.+++++|++. |++++.+|.
T Consensus 99 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~ 175 (237)
T 3b7b_A 99 NGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI--RDNEENICLHWAAFSGCVDIAEILLAA-KCDLHAVNI 175 (237)
T ss_dssp TTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHCCHHHHHHHHTT-TCCTTCCCT
T ss_pred CCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc--cCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCC
Confidence 54489999999999999999999999999999999988765 567899999999999999999999998 899999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 241 KKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 241 ~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+++
T Consensus 176 ~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 176 HGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred CCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998887
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.5e-37 Score=309.56 Aligned_cols=211 Identities=22% Similarity=0.283 Sum_probs=198.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHH----CCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLA----RGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTE 76 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~----~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~ 76 (644)
+||||+||..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~------------------------- 64 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRL------------------------- 64 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH-------------------------
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHH-------------------------
Confidence 699999999999999999997 799999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy2733 77 KVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQL 156 (644)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~ 156 (644)
|++.|++++..|..|.||||+|+..|+.++++
T Consensus 65 ------------------------------------------------Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 96 (241)
T 1k1a_A 65 ------------------------------------------------LVTAGASPMALDRHGQTAAHLACEHRSPTCLR 96 (241)
T ss_dssp ------------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred ------------------------------------------------HHHcCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 77888888889999999999999999999999
Q ss_pred HHhcCCCC----CccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcC
Q psy2733 157 LLLSHPEV----NLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYK 232 (644)
Q Consensus 157 ~Ll~~~~~----~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g 232 (644)
+|++ .+. +++..+..|.||||+|+..|+.+++++|++.++++..... ..|.||||+|+..|+.+++++|++. |
T Consensus 97 ~Ll~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~-g 173 (241)
T 1k1a_A 97 ALLD-SAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDI-KSGRSPLIHAVENNSLSMVQLLLQH-G 173 (241)
T ss_dssp HHHH-HSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TTCCCHHHHHHHTTCHHHHHHHHHT-T
T ss_pred HHHH-cCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccc-cCCCcHHHHHHHcCCHHHHHHHHHc-C
Confidence 9999 555 7888999999999999999999999999999988766322 6799999999999999999999998 8
Q ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 233 VNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 233 ~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 174 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 174 ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999998877
No 19
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.4e-37 Score=313.58 Aligned_cols=195 Identities=18% Similarity=0.172 Sum_probs=171.8
Q ss_pred HHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCcc
Q psy2733 122 DFVLLRNGCNVNI-QDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLA 200 (644)
Q Consensus 122 v~~Ll~~gad~n~-~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 200 (644)
++.|++.|++++. .|..|+||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.++...
T Consensus 39 v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~ 117 (253)
T 1yyh_A 39 ISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLE-ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL 117 (253)
T ss_dssp -------------CCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCT
T ss_pred HHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 4568888888865 48899999999999999999999999 799999999999999999999999999999999987333
Q ss_pred CCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHH
Q psy2733 201 TVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLH 280 (644)
Q Consensus 201 ~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh 280 (644)
.. .+..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 118 ~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 195 (253)
T 1yyh_A 118 DA-RMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195 (253)
T ss_dssp TC-CCTTCCCHHHHHHHHTCSSHHHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cc-cCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 22 458899999999999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCC
Q psy2733 281 FLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDT 350 (644)
Q Consensus 281 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~ 350 (644)
+|+..++ .+++++|+++|++++.+|..|+|||++|++.+
T Consensus 196 ~A~~~~~-------------------------------~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 196 LAAREGS-------------------------------YETAKVLLDHFANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp HHHHHTC-------------------------------HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHCCC-------------------------------HHHHHHHHHcCCCccccccCCCCHHHHHHHcC
Confidence 9999998 77999999999999999999999999999554
No 20
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1e-36 Score=303.65 Aligned_cols=229 Identities=25% Similarity=0.334 Sum_probs=204.9
Q ss_pred cccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcccccccccccccCC
Q psy2733 27 YYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDM 106 (644)
Q Consensus 27 n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (644)
+.+|.+|+||||+|+..|+.+++++|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~L------------------------------------------------------ 28 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRL------------------------------------------------------ 28 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHH------------------------------------------------------
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHH------------------------------------------------------
Confidence 56899999999999999999999884
Q ss_pred CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCH
Q psy2733 107 LDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNM 186 (644)
Q Consensus 107 ~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~ 186 (644)
++.+.+.|++++..|..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.
T Consensus 29 ---------------l~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~ 92 (241)
T 1k1a_A 29 ---------------VNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT-AGASPMALDRHGQTAAHLACEHRSP 92 (241)
T ss_dssp ---------------HHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ---------------HHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCH
Confidence 123556889999999999999999999999999999999 7999999999999999999999999
Q ss_pred HHHHHHHHhcCC--ccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHH
Q psy2733 187 KVTEKILALNRN--LATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD-LKKRTPLMAAVGQGQTSVINYLML 263 (644)
Q Consensus 187 ~~v~~Ll~~~~~--~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d-~~G~TpL~~Aa~~g~~~iv~~Ll~ 263 (644)
++++.|++.++. ......+..|.||||+|+..|+.+++++|++. |++++..+ ..|.||||+|+..|+.+++++|++
T Consensus 93 ~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 171 (241)
T 1k1a_A 93 TCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ 171 (241)
T ss_dssp HHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccccccCCCcHHHHHHHcCCHHHHHHHHH
Confidence 999999999873 12233567899999999999999999999998 89999999 889999999999999999999999
Q ss_pred CCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcc
Q psy2733 264 RDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPL 343 (644)
Q Consensus 264 ~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL 343 (644)
+|++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+|||
T Consensus 172 ~g~~~~~~~~~g~t~L~~A~~~~~-------------------------------~~~v~~Ll~~ga~~~~~~~~g~tpl 220 (241)
T 1k1a_A 172 HGANVNAQMYSGSSALHSASGRGL-------------------------------LPLVRTLVRSGADSSLKNCHNDTPL 220 (241)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHHTC-------------------------------HHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCC-------------------------------HHHHHHHHhcCCCCCCcCCCCCCHH
Confidence 999999999999999999999998 7799999999999999999999999
Q ss_pred hhhhcCCcHHHHHHH
Q psy2733 344 DLILEDTSLLNEIME 358 (644)
Q Consensus 344 ~~A~~~~~~~~~l~~ 358 (644)
++|+ ..+..+++..
T Consensus 221 ~~A~-~~~~~~i~~~ 234 (241)
T 1k1a_A 221 MVAR-SRRVIDILRG 234 (241)
T ss_dssp TTCS-SHHHHHHHTC
T ss_pred HHHH-hcCcHHHHhh
Confidence 9999 4444444443
No 21
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.2e-37 Score=304.79 Aligned_cols=224 Identities=23% Similarity=0.299 Sum_probs=210.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC-CcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGAC-VYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~-~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
.||||+||..|+++.+++|++.+.. ++.+|..|+||||+|+..|+.+++++
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~---------------------------- 58 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEF---------------------------- 58 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHH----------------------------
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHH----------------------------
Confidence 4899999999999999999988654 67889999999999999999999987
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHh
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLL 159 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll 159 (644)
|++.|++++..|..|+||||+|+..|+.+++++|+
T Consensus 59 ---------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 93 (231)
T 3aji_A 59 ---------------------------------------------LLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALL 93 (231)
T ss_dssp ---------------------------------------------HHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred ---------------------------------------------HHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHH
Confidence 77888888999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC
Q psy2733 160 SHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD 239 (644)
Q Consensus 160 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d 239 (644)
+ .+++++..+..|.||||+|+..|+.+++++|++.+.++.. .+..|.||||+|+..|+.+++++|++. |++++.+|
T Consensus 94 ~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~ 169 (231)
T 3aji_A 94 V-KGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA--KDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQD 169 (231)
T ss_dssp H-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCC
T ss_pred H-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccC
Confidence 9 7999999999999999999999999999999999988765 567899999999999999999999998 89999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHH
Q psy2733 240 LKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILL 319 (644)
Q Consensus 240 ~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (644)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++ .
T Consensus 170 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~-------------------------------~ 218 (231)
T 3aji_A 170 TEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLG-------------------------------L 218 (231)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHH-------------------------------H
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHH-------------------------------H
Confidence 999999999999999999999999999999999999999999987766 6
Q ss_pred HHHHHHHHcCCCC
Q psy2733 320 AVFLFLVKHGAPL 332 (644)
Q Consensus 320 ~iv~~Ll~~Gadi 332 (644)
+++++|+++|+++
T Consensus 219 ~i~~lL~~~~a~i 231 (231)
T 3aji_A 219 ILKRLAEGEEASM 231 (231)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHccccccC
Confidence 7999999998764
No 22
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.5e-37 Score=330.21 Aligned_cols=179 Identities=16% Similarity=0.228 Sum_probs=164.0
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCC---CCccccCCCCCcHHHHHHHcC---CHHHHHHHHHh
Q psy2733 122 DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPE---VNLYLENSKGFNILNYAVLRG---NMKVTEKILAL 195 (644)
Q Consensus 122 v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~---~~~~~~d~~g~tpL~~A~~~g---~~~~v~~Ll~~ 195 (644)
+++|+++|++++..|..|.||||+|+..|+.+++++|++ .+ .+++..+..|.||||+|+..+ +.+++++|++.
T Consensus 182 v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~ 260 (373)
T 2fo1_E 182 VAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLN-STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK 260 (373)
T ss_dssp HHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTT-SHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH
T ss_pred HHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHh-cCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC
Confidence 344889999999999999999999999999999999999 55 789999999999999999998 89999999999
Q ss_pred cCCccCC------cCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy2733 196 NRNLATV------PKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALD 269 (644)
Q Consensus 196 ~~~~~~~------~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn 269 (644)
++++... ..+..|.||||+|+..|+.+++++|++..+++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 261 g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 261 GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 340 (373)
T ss_dssp TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 9887642 2356899999999999999999999998679999999999999999999999999999999999999
Q ss_pred cccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCC
Q psy2733 270 IQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPL 332 (644)
Q Consensus 270 ~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi 332 (644)
.+|..|+||||+|+..++ .+++++|+++|++.
T Consensus 341 ~~d~~g~t~l~~A~~~g~-------------------------------~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 341 AVDATDHTARQLAQANNH-------------------------------HNIVDIFDRCRPER 372 (373)
T ss_dssp CCCSSSCCHHHHHHHTTC-------------------------------HHHHHHHHTTC---
T ss_pred CCCCCCCCHHHHHHHcCC-------------------------------HHHHHHHHhcCccc
Confidence 999999999999999999 77999999999863
No 23
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.2e-36 Score=316.66 Aligned_cols=260 Identities=22% Similarity=0.177 Sum_probs=219.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++| .++++++.
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~------------------- 119 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNA------------------- 119 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC-------------------
Confidence 5999999999999999999999999999999999999999999999999999 88888877
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHH------
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDA------ 146 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A------ 146 (644)
.+..|.||||+|+ +++|+++|++++..+..|.||+++|
T Consensus 120 -----------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~ 170 (351)
T 3utm_A 120 -----------------------------MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELR 170 (351)
T ss_dssp -----------------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHH
T ss_pred -----------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhH
Confidence 7778999999996 9999999999999999999997764
Q ss_pred ---------------HHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHc---CCHHHHHHHHHhcCCccCCcCCCCC
Q psy2733 147 ---------------VAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLR---GNMKVTEKILALNRNLATVPKTSDG 208 (644)
Q Consensus 147 ---------------~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~~d~~g 208 (644)
+..++.+.++.++. .+......+..|.||||+|+.. +..+++++|++.+.++.. .+..|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~--~~~~g 247 (351)
T 3utm_A 171 ERLTYEFKGHSLLQAAREADLAKVKKTLA-LEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNE--KNKDF 247 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTC--CCTTC
T ss_pred HHHHhhhcccHHHHHHHhccHHHHHHHHH-hhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCC--cCCCC
Confidence 56677777777777 3444445678899999999999 568999999999988765 56889
Q ss_pred chHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCc
Q psy2733 209 FTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNF 288 (644)
Q Consensus 209 ~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~ 288 (644)
+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||+|+|.
T Consensus 248 ~t~L~~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~----- 321 (351)
T 3utm_A 248 MTPLHVAAERAHNDVMEVLHKH-GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN----- 321 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC-----
T ss_pred CCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhh-----
Confidence 9999999999999999999998 8999999999999999999999999999999999999999999999999983
Q ss_pred ccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCC
Q psy2733 289 YKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDT 350 (644)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~ 350 (644)
.+++++|.+.+. ....++.+++..|++.+
T Consensus 322 ------------------------------~~~~~~l~~~~~---~~~~~~~~~l~~A~~~g 350 (351)
T 3utm_A 322 ------------------------------EAVQQILSESTP---MRTSDVDYRLLEASKAG 350 (351)
T ss_dssp ------------------------------HHHHHHHHHC----------------------
T ss_pred ------------------------------HHHHHHHHhccc---cccCcceeehhhhhccC
Confidence 458888888764 35567888898888554
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.8e-38 Score=318.01 Aligned_cols=209 Identities=23% Similarity=0.249 Sum_probs=171.2
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCC--------CcccCCCCCcHHHHHHhcCCHH-HHHHHhhccCCCccchhhhhhhhhc
Q psy2733 2 TLLHILAYQGCVEELNILLARGAC--------VYYPDDAGDTALHYAAFGNKPD-AIQINSHVSGANRSRKHIYKERHRT 72 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~--------~n~~d~~G~TpLh~Aa~~g~~e-iv~lL~~~a~~~~~~~~~~~~~~~~ 72 (644)
|||+.||..|++++|++||+.|++ ++..|..|.||||+|+..++.+ +++
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~---------------------- 70 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLA---------------------- 70 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC----------------------------------------------------------
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHH----------------------
Confidence 799999999999999999999875 4667888999999999877643 333
Q ss_pred cccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy2733 73 VTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE 152 (644)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~ 152 (644)
.|++.|+++|.+|.+|+||||+|+..|+.
T Consensus 71 ---------------------------------------------------~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~ 99 (269)
T 4b93_B 71 ---------------------------------------------------KVPASGLGVNVTSQDGSSPLHVAALHGRA 99 (269)
T ss_dssp -------------------------------------------------------CCCCTTCCCTTSCCHHHHHHHTTCT
T ss_pred ---------------------------------------------------HHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 38889999999999999999999999999
Q ss_pred HHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcC
Q psy2733 153 EIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYK 232 (644)
Q Consensus 153 ~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g 232 (644)
+++++|++ .+++++..+..|.||+++|+..++.++++.|++.+++++. .|..|+||||+|+..|+.+++++|++. |
T Consensus 100 ~~v~~Ll~-~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~--~d~~g~TpL~~A~~~g~~~~v~~Ll~~-g 175 (269)
T 4b93_B 100 DLIPLLLK-HGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK--KDLSGNTPLIYACSGGHHELVALLLQH-G 175 (269)
T ss_dssp THHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC--CCTTCCCHHHHHHHTTCGGGHHHHHHT-T
T ss_pred HHHHHHHh-cCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHCCCHHHHHHHHHC-C
Confidence 99999999 7999999999999999999999999999999999988766 668999999999999999999999998 8
Q ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 233 VNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 233 ~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
+++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|.+|+||||+|+.+++
T Consensus 176 advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 176 ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999999999999986654
No 25
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-36 Score=312.32 Aligned_cols=245 Identities=23% Similarity=0.254 Sum_probs=211.6
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
||||+||..|++++|++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 42 t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~------------------------------ 91 (299)
T 1s70_B 42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKF------------------------------ 91 (299)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHH------------------------------
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHH------------------------------
Confidence 79999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcC
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 161 (644)
|+++|++++..|..|+||||+|+..|+.+++++|++
T Consensus 92 -------------------------------------------Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~- 127 (299)
T 1s70_B 92 -------------------------------------------LVENGANINQPDNEGWIPLHAAASCGYLDIAEYLIS- 127 (299)
T ss_dssp -------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-
T ss_pred -------------------------------------------HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-
Confidence 788889999999999999999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCC
Q psy2733 162 PEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK 241 (644)
Q Consensus 162 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~ 241 (644)
.|++++..+..|.||||+|+..++.++++.++........... ..+.+++ ...+..++..........+..
T Consensus 128 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~ 198 (299)
T 1s70_B 128 QGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAAR-KEEERIM--------LRDARQWLNSGHINDVRHAKS 198 (299)
T ss_dssp TTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHH-HHHHHHH--------HHHHHHHHHHTCCCCCCCTTT
T ss_pred CCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhh-hhhhhHH--------HHHHHHHHhccCcchhhhcCC
Confidence 7999999999999999999999999999988875432211100 1122222 234455666656666677889
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHH
Q psy2733 242 KRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAV 321 (644)
Q Consensus 242 G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 321 (644)
|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++ .++
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~-------------------------------~~~ 247 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK-------------------------------EEA 247 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC-------------------------------HHH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCC-------------------------------HHH
Confidence 9999999999999999999999999999999999999999999998 779
Q ss_pred HHHHHHcCCCCCCCCCCCCCcchhhhcCCcHHHHHHHHhhh
Q psy2733 322 FLFLVKHGAPLSLENNNRQKPLDLILEDTSLLNEIMEHARE 362 (644)
Q Consensus 322 v~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~~~~~~ 362 (644)
+++|+++|++++.+|..|+|||++|.+ +..+.+.++...
T Consensus 248 v~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~~~l~~l~~~ 286 (299)
T 1s70_B 248 CRILVENLCDMEAVNKVGQTAFDVADE--DILGYLEELQKK 286 (299)
T ss_dssp HHHHHHTTCCTTCCCTTSCCTTTSCCS--GGGHHHHHHHHH
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHH--HHHHHHHHHHHH
Confidence 999999999999999999999999973 455555555443
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-37 Score=312.88 Aligned_cols=230 Identities=19% Similarity=0.280 Sum_probs=177.7
Q ss_pred cccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcccccccccccccC
Q psy2733 27 YYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNED 105 (644)
Q Consensus 27 n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (644)
..+|..+.|||+.|+..|+.++|++| ..+++...
T Consensus 5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~--------------------------------------------- 39 (269)
T 4b93_B 5 TKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLE--------------------------------------------- 39 (269)
T ss_dssp --CCCHHHHHHHHHHHTTCHHHHHHHHTCC--------------------------------------------------
T ss_pred cccCccchhHHHHHHHcCCHHHHHHHHHCCCcccc---------------------------------------------
Confidence 34677889999999999999999997 55543311
Q ss_pred CCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH-HHHHHHhcCCCCCccccCCCCCcHHHHHHHcC
Q psy2733 106 MLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE-EIQLLLLSHPEVNLYLENSKGFNILNYAVLRG 184 (644)
Q Consensus 106 ~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~-~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g 184 (644)
.....++..+..|.|||++|+..+.. .++++|++ .|++++..|.+|.||||+|+..|
T Consensus 40 ---------------------~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~-~Gadvn~~d~~G~TpLh~A~~~g 97 (269)
T 4b93_B 40 ---------------------DAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPA-SGLGVNVTSQDGSSPLHVAALHG 97 (269)
T ss_dssp ---------------------------------------------------------CCCCTTCCCTTSCCHHHHHHHTT
T ss_pred ---------------------cccccccccCccCCCHHHHHHHhCCHHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcC
Confidence 11223456678899999999988865 58889998 79999999999999999999999
Q ss_pred CHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC
Q psy2733 185 NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLR 264 (644)
Q Consensus 185 ~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~ 264 (644)
+.+++++|++.++++.. .+..|.||+|+|+..++.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 98 ~~~~v~~Ll~~~a~~~~--~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ 174 (269)
T 4b93_B 98 RADLIPLLLKHGANAGA--RNADQAVPLHLACQQGHFQVVKCLLDS-NAKPNKKDLSGNTPLIYACSGGHHELVALLLQH 174 (269)
T ss_dssp CTTHHHHHHHTTCCTTC--CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHT
T ss_pred cHHHHHHHHhcCCCcCc--cCCCCCCccccccccChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Confidence 99999999999988765 567899999999999999999999998 899999999999999999999999999999999
Q ss_pred CCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcch
Q psy2733 265 DVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLD 344 (644)
Q Consensus 265 gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~ 344 (644)
|+++|.+|..|+||||+|+..|+ .+++++|+++|||++.+|.+|+||||
T Consensus 175 gadvn~~~~~g~t~Lh~A~~~g~-------------------------------~~~v~~Ll~~Gad~~~~d~~G~TpL~ 223 (269)
T 4b93_B 175 GASINASNNKGNTALHEAVIEKH-------------------------------VFVVELLLLHGASVQVLNKRQRTAVD 223 (269)
T ss_dssp TCCTTCBCTTSCBHHHHHHHTTC-------------------------------HHHHHHHHHTTCCSCCCCTTSCCSGG
T ss_pred CCCCCccccCCCcHHHHHHHcCC-------------------------------HHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 99999999999999999999999 78999999999999999999999999
Q ss_pred hhhcCCcHHHHHH
Q psy2733 345 LILEDTSLLNEIM 357 (644)
Q Consensus 345 ~A~~~~~~~~~l~ 357 (644)
+|+++++++++|.
T Consensus 224 ~A~~~~~i~~lL~ 236 (269)
T 4b93_B 224 CAEQNSKIMELLQ 236 (269)
T ss_dssp GSCTTCHHHHHTT
T ss_pred HHHhCCcHHHHHH
Confidence 9998777665554
No 27
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.5e-35 Score=292.77 Aligned_cols=191 Identities=25% Similarity=0.296 Sum_probs=174.8
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHhcCCC--CCccc-cCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCch
Q psy2733 134 IQDNNQDTPMHDAVAKGFEEIQLLLLSHPE--VNLYL-ENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFT 210 (644)
Q Consensus 134 ~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~--~~~~~-~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T 210 (644)
..|..|.||||+|+..|+.+++++|++ .+ .+++. .+..|.||||+|+..|+.++++.|++.+........+..|.|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t 109 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITSFLLS-KMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVT 109 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHH-TCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-ccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCC
Confidence 367899999999999999999999999 67 56666 788999999999999999999999999844444446788999
Q ss_pred HHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCcccCCCCcHHHHHHHcCCcc
Q psy2733 211 PLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRD-VALDIQDIDGNGLLHFLFIKKNFY 289 (644)
Q Consensus 211 ~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~g-advn~~d~~G~T~Lh~A~~~~~~~ 289 (644)
|||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..++
T Consensus 110 ~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~-- 186 (228)
T 2dzn_A 110 CLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH-- 186 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC--
T ss_pred HHHHHHHcCCHhHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCC--
Confidence 99999999999999999998 8999999999999999999999999999999999 9999999999999999999998
Q ss_pred cccccccCCchhHHhhhhcCCCCCccchHHHHHHHHH-HcCCCCCCCCCCCCCcchhhhcCCcHHHHHHH
Q psy2733 290 KTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLV-KHGAPLSLENNNRQKPLDLILEDTSLLNEIME 358 (644)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll-~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l~~ 358 (644)
.+++++|+ ++|++++.+|..|+|||++|. ..++.+.+++
T Consensus 187 -----------------------------~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~-~~~~~~~l~~ 226 (228)
T 2dzn_A 187 -----------------------------GDAAVLLVEKYGAEYDLVDNKGAKAEDVAL-NEQVKKFFLN 226 (228)
T ss_dssp -----------------------------HHHHHHHHHHHCCCSCCBCTTSCBGGGGCS-STTHHHHHHT
T ss_pred -----------------------------HHHHHHHHHhcCCCCCccCCCCCcHHHHHH-HHHHHHHHHh
Confidence 77999999 999999999999999999998 5566666553
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.1e-35 Score=293.61 Aligned_cols=208 Identities=22% Similarity=0.235 Sum_probs=191.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcc-cCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYY-PDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~-~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+||||+|+..|+.++|++|++.|+++.. +|..|+||||+|+..|+.+++++
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------------------- 54 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSF---------------------------- 54 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHH----------------------------
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHH----------------------------
Confidence 6999999999999999999999988654 89999999999999999999998
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCC--CCCCC-CCCCCCcHHHHHHHcCCHHHHH
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNG--CNVNI-QDNNQDTPMHDAVAKGFEEIQL 156 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~g--ad~n~-~d~~G~TpL~~A~~~g~~~iv~ 156 (644)
|++.| .+++. .+..|+||||+|+..|+.++++
T Consensus 55 ---------------------------------------------Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 89 (228)
T 2dzn_A 55 ---------------------------------------------LLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVK 89 (228)
T ss_dssp ---------------------------------------------HHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred ---------------------------------------------HHhccccccccccCCCCCCCHHHHHHHcCCHHHHH
Confidence 45555 33344 6789999999999999999999
Q ss_pred HHhcCCC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCC
Q psy2733 157 LLLSHPE--VNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVN 234 (644)
Q Consensus 157 ~Ll~~~~--~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~ 234 (644)
+|++ .+ .+++..+..|.||||+|+..|+.+++++|++.++++.. .+..|+||||+|+..|+.+++++|++.+.++
T Consensus 90 ~Ll~-~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 166 (228)
T 2dzn_A 90 SLYD-RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI--KDKFNQIPLHRAASVGSLKLIELLCGLGKSA 166 (228)
T ss_dssp HHHS-SSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC--CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC
T ss_pred HHHh-CCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccc--cCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 9999 56 88999999999999999999999999999999988765 5678999999999999999999999984499
Q ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCcccCCCCcHHHHHHH
Q psy2733 235 INALDLKKRTPLMAAVGQGQTSVINYLM-LRDVALDIQDIDGNGLLHFLFI 284 (644)
Q Consensus 235 in~~d~~G~TpL~~Aa~~g~~~iv~~Ll-~~gadvn~~d~~G~T~Lh~A~~ 284 (644)
++.+|..|+||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+.
T Consensus 167 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 167 VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 9999999999999999999999999999 8999999999999999999964
No 29
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=292.64 Aligned_cols=226 Identities=25% Similarity=0.324 Sum_probs=205.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------------------- 60 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY----------------------------- 60 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH-----------------------------
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHH-----------------------------
Confidence 489999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHh
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQD-NNQDTPMHDAVAKGFEEIQLLLL 159 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d-~~G~TpL~~A~~~g~~~iv~~Ll 159 (644)
|++.|++++..+ ..|.||||+|+..|+.+++++|+
T Consensus 61 --------------------------------------------Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll 96 (240)
T 3eu9_A 61 --------------------------------------------YISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM 96 (240)
T ss_dssp --------------------------------------------HHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH
T ss_pred --------------------------------------------HHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH
Confidence 556666666444 45999999999999999999999
Q ss_pred cCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCc-HHHHHHHHHhcCCCcccC
Q psy2733 160 SHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDH-IEIVELLVEKYKVNINAL 238 (644)
Q Consensus 160 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~-~~~v~~Ll~~~g~~in~~ 238 (644)
+ .|++++..+..|.||||+|+..|+.+++++|++.++++.. .+..|.||||+|+..++ .+++++|++. |++++..
T Consensus 97 ~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~--~~~~g~t~l~~a~~~~~~~~~~~~L~~~-~~~~~~~ 172 (240)
T 3eu9_A 97 K-YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM--MDQNGMTPLMWAAYRTHSVDPTRLLLTF-NVSVNLG 172 (240)
T ss_dssp H-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHCCSSTTHHHHHHT-TCCTTCC
T ss_pred H-cCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccc--cCCCCCcHHHHHHHhCChHHHHHHHHhc-CCCcchh
Confidence 9 7999999999999999999999999999999999987765 56789999999997766 8899999988 8999999
Q ss_pred CC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccch
Q psy2733 239 DL-KKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGI 317 (644)
Q Consensus 239 d~-~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (644)
+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 173 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~------------------------------ 222 (240)
T 3eu9_A 173 DKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN------------------------------ 222 (240)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTC------------------------------
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc------------------------------
Confidence 97 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCC
Q psy2733 318 LLAVFLFLVKHGAPLSL 334 (644)
Q Consensus 318 ~~~iv~~Ll~~Gadi~~ 334 (644)
.+++++|+++|++...
T Consensus 223 -~~~v~~L~~~~~~~~~ 238 (240)
T 3eu9_A 223 -VWMINHLQEARQAKGY 238 (240)
T ss_dssp -HHHHHHHHHHC-----
T ss_pred -HHHHHHHHHhhhccCc
Confidence 7799999999987654
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.2e-35 Score=290.80 Aligned_cols=217 Identities=22% Similarity=0.235 Sum_probs=200.2
Q ss_pred cCCHHHHHHHHHCCCCCccc-CCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCC
Q psy2733 10 QGCVEELNILLARGACVYYP-DDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVE 88 (644)
Q Consensus 10 ~G~~e~vk~LL~~Ga~~n~~-d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (644)
.|+.+++++|++.|++++.. |..|+||||+|+..|+.+++++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~------------------------------------- 43 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKR------------------------------------- 43 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHH-------------------------------------
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHH-------------------------------------
Confidence 37889999999999998776 8999999999999999999987
Q ss_pred CCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccc
Q psy2733 89 PETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYL 168 (644)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~ 168 (644)
|+++|++++..|..|+||||+|+..|+.+++++|++....+++.
T Consensus 44 ------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 87 (223)
T 2f8y_A 44 ------------------------------------LLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA 87 (223)
T ss_dssp ------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTC
T ss_pred ------------------------------------HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 77888889999999999999999999999999999954458999
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHH
Q psy2733 169 ENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMA 248 (644)
Q Consensus 169 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~ 248 (644)
.+..|.||||+|+..|+.+++++|++.++++.. .+..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+
T Consensus 88 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 164 (223)
T 2f8y_A 88 RMHDGTTPLILAARLAVEGMLEDLINSHADVNA--VDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFL 164 (223)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC--BCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC--cCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCcCHHHH
Confidence 999999999999999999999999999988765 557899999999999999999999998 89999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHc
Q psy2733 249 AVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKH 328 (644)
Q Consensus 249 Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~ 328 (644)
|+..|+.+++++|+++|++++.+|..|.||||+|+..++ .+++++|+++
T Consensus 165 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~-------------------------------~~i~~~L~~~ 213 (223)
T 2f8y_A 165 AAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH-------------------------------HDIVRLLDEY 213 (223)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-------------------------------HHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc-------------------------------hHHHHHHHHc
Confidence 999999999999999999999999999999999999998 7799999999
Q ss_pred CCCCC
Q psy2733 329 GAPLS 333 (644)
Q Consensus 329 Gadi~ 333 (644)
|+...
T Consensus 214 g~~~~ 218 (223)
T 2f8y_A 214 NLVRS 218 (223)
T ss_dssp TCSSC
T ss_pred CCCcc
Confidence 98753
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=7.5e-36 Score=306.73 Aligned_cols=250 Identities=15% Similarity=0.147 Sum_probs=205.7
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCCCCC
Q psy2733 10 QGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVE 88 (644)
Q Consensus 10 ~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (644)
..+.+.+..||..+ +++.+|..|+||||+|+..|+.+++++| ..+++++.
T Consensus 9 ~~~~~~v~~lL~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---------------------------- 59 (285)
T 3kea_A 9 TWKSKQLKSFLSSK-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL---------------------------- 59 (285)
T ss_dssp GCCHHHHHHHHHST-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC----------------------------
T ss_pred hcCHHHHHHHHHhC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC----------------------------
Confidence 33444444444443 5777888888888888888888888888 77777654
Q ss_pred CCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcC
Q psy2733 89 PETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161 (644)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 161 (644)
. +|.||||+|+ +++|+++|++++..|..|+||||+|+..|+.+++++|++
T Consensus 60 --------------------~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~- 116 (285)
T 3kea_A 60 --------------------L--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVK- 116 (285)
T ss_dssp --------------------C--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-
T ss_pred --------------------C--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh-
Confidence 3 3678888885 888999999999999999999999999999999999999
Q ss_pred CCCCccccCCCC-CcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCC
Q psy2733 162 PEVNLYLENSKG-FNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDL 240 (644)
Q Consensus 162 ~~~~~~~~d~~g-~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~ 240 (644)
.|++++..+..| .||||+|+..|+.+++++|++.++.... . ..|.||||+|+..|+.+++++|++. |++++.+|.
T Consensus 117 ~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~-~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~ 192 (285)
T 3kea_A 117 KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--L-AILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNS 192 (285)
T ss_dssp HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--C-STHHHHHHHHHHTTCHHHHHHHHHH-HHHTCTTCC
T ss_pred cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--c-cCCccHHHHHHHcChHHHHHHHHHc-CCCCCcccC
Confidence 699999999999 7999999999999999999999877632 1 3899999999999999999999998 899999999
Q ss_pred CCCCH-HHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHH
Q psy2733 241 KKRTP-LMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILL 319 (644)
Q Consensus 241 ~G~Tp-L~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (644)
.|+|| ||+|+..|+.+++++|+++|++++.+|. .|+..++ .
T Consensus 193 ~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~-------------------------------~ 234 (285)
T 3kea_A 193 LLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDD-------------------------------A 234 (285)
T ss_dssp CBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTC-------------------------------H
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCC-------------------------------H
Confidence 99998 9999999999999999999999999883 3444555 7
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcchhhhcCCcHHHHH
Q psy2733 320 AVFLFLVKHGAPLSLENNNRQKPLDLILEDTSLLNEI 356 (644)
Q Consensus 320 ~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~~~~~l 356 (644)
+++++|+++|++++..... ..+.++. +..+.+.+
T Consensus 235 ~iv~~Ll~~g~~~~~~~~~--~~~~~~~-~~~~~~ii 268 (285)
T 3kea_A 235 EIAKMIIEKHVEYKSDSYT--KDLDIVK-NNKLDEII 268 (285)
T ss_dssp HHHHHHHHHHHHHTTCTTT--TTCHHHH-TCSHHHHH
T ss_pred HHHHHHHHcCCCCCCcccc--chHHHHh-hhhHHHHH
Confidence 8999999999987655433 3455544 44443333
No 32
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.3e-34 Score=283.94 Aligned_cols=182 Identities=26% Similarity=0.396 Sum_probs=173.6
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchH
Q psy2733 132 VNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTP 211 (644)
Q Consensus 132 ~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~ 211 (644)
++..|..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.++++.. .+..|.||
T Consensus 33 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~ 109 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQ-LGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA--VNQNGCTP 109 (231)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCH
T ss_pred hhcCCCCCCCHHHHHHHcCcHHHHHHHHH-hCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCC--CCCCCCCH
Confidence 45678899999999999999999999999 7999999999999999999999999999999999988765 56789999
Q ss_pred HHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccc
Q psy2733 212 LHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKT 291 (644)
Q Consensus 212 Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~ 291 (644)
||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 110 L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---- 184 (231)
T 3aji_A 110 LHYAASKNRHEIAVMLLEG-GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEER---- 184 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC----
T ss_pred HHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCC----
Confidence 9999999999999999998 89999999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhc
Q psy2733 292 PITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILE 348 (644)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~ 348 (644)
.+++++|+++|++++.+|..|+|||++|++
T Consensus 185 ---------------------------~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 185 ---------------------------VEEAKFLVTQGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp ---------------------------HHHHHHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred ---------------------------HHHHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 779999999999999999999999999984
No 33
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.6e-35 Score=313.03 Aligned_cols=230 Identities=22% Similarity=0.253 Sum_probs=202.0
Q ss_pred CCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCccccccccccc
Q psy2733 23 GACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRM 102 (644)
Q Consensus 23 Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (644)
+.+++..|.+|+||||+|+..|+.++|++
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~--------------------------------------------------- 38 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRR--------------------------------------------------- 38 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHH---------------------------------------------------
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHH---------------------------------------------------
Confidence 35677789999999999999999999987
Q ss_pred ccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHH
Q psy2733 103 NEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVL 182 (644)
Q Consensus 103 ~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~ 182 (644)
|++.|++++..|..|.||||+|+..|+.+++++|++ .+++++ +..|.||||+|+.
T Consensus 39 ----------------------Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~--~~~g~t~L~~A~~ 93 (364)
T 3ljn_A 39 ----------------------LIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLAS-VGEVHS--LWHGQKPIHLAVM 93 (364)
T ss_dssp ----------------------HHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHH-HCCCCC--CBTTBCHHHHHHH
T ss_pred ----------------------HHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCcc--ccCCCCHHHHHHH
Confidence 788899999999999999999999999999999999 677544 4579999999999
Q ss_pred cCCHHHHHHHHHh----cCCccC---------------CcCCCCCchHHHHHHhcC--cHHHHHHHHHhcCCCcccCCCC
Q psy2733 183 RGNMKVTEKILAL----NRNLAT---------------VPKTSDGFTPLHVACFND--HIEIVELLVEKYKVNINALDLK 241 (644)
Q Consensus 183 ~g~~~~v~~Ll~~----~~~~~~---------------~~~d~~g~T~Lh~A~~~g--~~~~v~~Ll~~~g~~in~~d~~ 241 (644)
.|+.+++++|++. +..... ...+..|.||||+|+..| +.+++++|++. |++++.+|..
T Consensus 94 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~~d~~ 172 (364)
T 3ljn_A 94 ANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTAKDKA 172 (364)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTCCCTT
T ss_pred cCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCcccCCC
Confidence 9999999999998 554432 013467999999999999 99999999999 8999999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC-----CCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccc
Q psy2733 242 KRTPLMAAVGQGQTSVINYLMLRDVA-----LDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHG 316 (644)
Q Consensus 242 G~TpL~~Aa~~g~~~iv~~Ll~~gad-----vn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (644)
|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++
T Consensus 173 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~----------------------------- 223 (364)
T 3ljn_A 173 DETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW----------------------------- 223 (364)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC-----------------------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC-----------------------------
Confidence 99999999999999999999999999 99999999999999999998
Q ss_pred hHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCC--cHHHHHHHHh
Q psy2733 317 ILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDT--SLLNEIMEHA 360 (644)
Q Consensus 317 ~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~--~~~~~l~~~~ 360 (644)
.+++++|+++|++++.+|..|+|||++|+..+ ++++.|++..
T Consensus 224 --~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 224 --EDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKT 267 (364)
T ss_dssp --HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHS
T ss_pred --HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcC
Confidence 78999999999999999999999999999654 3455555543
No 34
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=5.2e-36 Score=314.13 Aligned_cols=261 Identities=15% Similarity=0.100 Sum_probs=198.3
Q ss_pred CCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCCCCCC
Q psy2733 11 GCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEP 89 (644)
Q Consensus 11 G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (644)
...++|++|+++|++++.+|..|.|+++ |+.++|++| .+|++++... +..+......
T Consensus 30 ~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~------~~~a~~~~~~----------- 87 (327)
T 1sw6_A 30 FTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQE------MPTSLNNDSS----------- 87 (327)
T ss_dssp CCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC--------------------------------
T ss_pred hcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCcccc------chHhhhcccc-----------
Confidence 4557899999999999999999999987 999999999 8998865410 0000000000
Q ss_pred CCcccccccccccccCCCCCCcccchhhH-------HHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHhcC
Q psy2733 90 ETPMLNMKFIPRMNEDMLDTPSAECSGIL-------IKQDFVLLRNGCNVNI-QDNNQDTPMHDAVAKGFEEIQLLLLSH 161 (644)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~t~L~-------~a~v~~Ll~~gad~n~-~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 161 (644)
.+ .........+.++ ..++++|++.|+++|. .|..|+||||+|+..|+.+++++|++
T Consensus 88 ----------~~----~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~- 152 (327)
T 1sw6_A 88 ----------NR----NSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK- 152 (327)
T ss_dssp ------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH-
T ss_pred ----------cc----cccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-
Confidence 00 0000001111112 2248889999999999 89999999999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHHcCC---HHHHHHHHHhc-CCccCCcCCCCCchHHHHHHh----cCcHHHHHHHHHhc--
Q psy2733 162 PEVNLYLENSKGFNILNYAVLRGN---MKVTEKILALN-RNLATVPKTSDGFTPLHVACF----NDHIEIVELLVEKY-- 231 (644)
Q Consensus 162 ~~~~~~~~d~~g~tpL~~A~~~g~---~~~v~~Ll~~~-~~~~~~~~d~~g~T~Lh~A~~----~g~~~~v~~Ll~~~-- 231 (644)
.|++++.+|..|.||||+|+..|+ .++++.|++.+ +++.. .|..|+||||+|+. .|+.+++++|++..
T Consensus 153 ~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~--~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~ 230 (327)
T 1sw6_A 153 HGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL--EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG 230 (327)
T ss_dssp TTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE--ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred cCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC--CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 799999999999999999999998 67788888776 33332 56899999999999 89999999999864
Q ss_pred -----------------CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCccccccc
Q psy2733 232 -----------------KVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPIT 294 (644)
Q Consensus 232 -----------------g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~ 294 (644)
|++++.+|..|.||||+|+. +++|+++ +++.+|..|+||||+|+..++
T Consensus 231 ~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~------- 295 (327)
T 1sw6_A 231 WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGN------- 295 (327)
T ss_dssp HHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCC-------
T ss_pred HHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCC-------
Confidence 78999999999999999985 8999988 688999999999999999999
Q ss_pred ccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcC
Q psy2733 295 REKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILED 349 (644)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~ 349 (644)
.+++++|+++||+++.+|.+|+||||+|++.
T Consensus 296 ------------------------~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 296 ------------------------ISIVDALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp ------------------------HHHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred ------------------------HHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 7899999999999999999999999999853
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4.5e-34 Score=293.48 Aligned_cols=210 Identities=19% Similarity=0.167 Sum_probs=185.5
Q ss_pred CCcccchhhHHHH-------HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHH
Q psy2733 109 TPSAECSGILIKQ-------DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAV 181 (644)
Q Consensus 109 ~~~~~~t~L~~a~-------v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~ 181 (644)
.+..|.||||+|+ +++|+++|++++.. +|+||||+|+..|+.+++++|++ .|++++..+..|.||||+|+
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLF-SGLDDSQFDDKGNTALYYAV 103 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHH-TTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCcHHHHHH
Confidence 7889999999996 99999999999988 49999999999999999999999 79999999999999999999
Q ss_pred HcCCHHHHHHHHHhcCCccCCcCCCCC-chHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHH
Q psy2733 182 LRGNMKVTEKILALNRNLATVPKTSDG-FTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINY 260 (644)
Q Consensus 182 ~~g~~~~v~~Ll~~~~~~~~~~~d~~g-~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~ 260 (644)
..|+.+++++|++.++++.. .+..| .||||+|+..|+.+++++|++. |.++... ..|.||||+|+..|+.+++++
T Consensus 104 ~~g~~~~v~~Ll~~ga~~~~--~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~-~~g~t~L~~A~~~g~~~~v~~ 179 (285)
T 3kea_A 104 DSGNMQTVKLFVKKNWRLMF--YGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPSTFDL-AILLSCIHITIKNGHVDMMIL 179 (285)
T ss_dssp HTTCHHHHHHHHHHCGGGGG--CSSSGGGSHHHHHHHTTCHHHHHHHHTT-SCTTCCC-STHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHhcCCCCCc--cCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCccccc-cCCccHHHHHHHcChHHHHHH
Confidence 99999999999999888765 55677 7999999999999999999998 5655222 289999999999999999999
Q ss_pred HHHCCCCCCcccCCCCcH-HHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCC
Q psy2733 261 LMLRDVALDIQDIDGNGL-LHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNR 339 (644)
Q Consensus 261 Ll~~gadvn~~d~~G~T~-Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G 339 (644)
|+++|++++.+|..|+|| ||+|+..++ .+++++|+++|++++.+|.
T Consensus 180 Ll~~gad~n~~~~~g~t~~L~~A~~~~~-------------------------------~~~v~~Ll~~gad~~~~~~-- 226 (285)
T 3kea_A 180 LLDYMTSTNTNNSLLFIPDIKLAIDNKD-------------------------------IEMLQALFKYDINIYSANL-- 226 (285)
T ss_dssp HHHHHHHTCTTCCCBCCTTHHHHHHHTC-------------------------------HHHHHHHTTSCBCSTTTTG--
T ss_pred HHHcCCCCCcccCCCCChHHHHHHHcCC-------------------------------HHHHHHHHHcCCCCCCCCh--
Confidence 999999999999999998 999999998 7799999999999999984
Q ss_pred CCcchhhh--cCCcHHHHHHHHhhhh
Q psy2733 340 QKPLDLIL--EDTSLLNEIMEHAREY 363 (644)
Q Consensus 340 ~TpL~~A~--~~~~~~~~l~~~~~~~ 363 (644)
.|+ .+.++++.|++...+.
T Consensus 227 -----~a~~~~~~~iv~~Ll~~g~~~ 247 (285)
T 3kea_A 227 -----ENVLLDDAEIAKMIIEKHVEY 247 (285)
T ss_dssp -----GGGTTTCHHHHHHHHHHHHHH
T ss_pred -----hhhhcCCHHHHHHHHHcCCCC
Confidence 233 2345666776665443
No 36
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.4e-34 Score=288.15 Aligned_cols=220 Identities=21% Similarity=0.205 Sum_probs=192.0
Q ss_pred cccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcccccccccccccC
Q psy2733 27 YYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNED 105 (644)
Q Consensus 27 n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (644)
+.+|.+|+||||+|+..|+.+++++| ..
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--------------------------------------------------- 30 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQ--------------------------------------------------- 30 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC----------------------------------------------------
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHH---------------------------------------------------
Confidence 35789999999999999999888764 21
Q ss_pred CCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCC
Q psy2733 106 MLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGN 185 (644)
Q Consensus 106 ~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~ 185 (644)
....|+++|..|..|+||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+
T Consensus 31 -------------------~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~ 90 (236)
T 1ikn_D 31 -------------------VKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG-AGCDPELRDFRGNTPLHLACEQGC 90 (236)
T ss_dssp -----------------------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCS-CCCCSCCCCTTCCCHHHHHHHHTC
T ss_pred -------------------hhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCC
Confidence 223355788899999999999999999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhcCCcc----CCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCC-CCCCHHHHHHHcCCHHHHHH
Q psy2733 186 MKVTEKILALNRNLA----TVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDL-KKRTPLMAAVGQGQTSVINY 260 (644)
Q Consensus 186 ~~~v~~Ll~~~~~~~----~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~-~G~TpL~~Aa~~g~~~iv~~ 260 (644)
.+++++|++.++... ....+..|+||||+|+..|+.+++++|++. |++++.++. .|.||||+|+..|+.+++++
T Consensus 91 ~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~ 169 (236)
T 1ikn_D 91 LASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVDLQNPDLVSL 169 (236)
T ss_dssp HHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999987521 233557899999999999999999999998 899999998 99999999999999999999
Q ss_pred HHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCC--CCCCC
Q psy2733 261 LMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLS--LENNN 338 (644)
Q Consensus 261 Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~--~~n~~ 338 (644)
|+++|++++.+|..|+||||+|+..++ .+++++|+++|++.. ..+..
T Consensus 170 Ll~~ga~~~~~~~~g~tpl~~A~~~~~-------------------------------~~~~~~Ll~~ga~~~~~~~~~~ 218 (236)
T 1ikn_D 170 LLKCGADVNRVTYQGYSPYQLTWGRPS-------------------------------TRIQQQLGQLTLENLQMLPESE 218 (236)
T ss_dssp HHTTTCCSCCCCTTCCCGGGGCTTSSC-------------------------------HHHHHHHHTTSCGGGSSCCCCC
T ss_pred HHHcCCCCCcccCCCCCHHHHHHccCc-------------------------------hHHHHHHHHcchhhhhcCCccc
Confidence 999999999999999999999999988 779999999999876 88999
Q ss_pred CCCcchhhhcC
Q psy2733 339 RQKPLDLILED 349 (644)
Q Consensus 339 G~TpL~~A~~~ 349 (644)
|.||.+.+...
T Consensus 219 ~~~~~~~~~~~ 229 (236)
T 1ikn_D 219 DEESYDTESEF 229 (236)
T ss_dssp TTTCCCCC---
T ss_pred hHHHHhhhccc
Confidence 99999988743
No 37
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.5e-34 Score=289.59 Aligned_cols=246 Identities=18% Similarity=0.191 Sum_probs=184.6
Q ss_pred CcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcccccccccccccC
Q psy2733 26 VYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNED 105 (644)
Q Consensus 26 ~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (644)
++.+|.+|+||||+|+..|+.++|++|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~L----------------------------------------------------- 28 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFL----------------------------------------------------- 28 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHH-----------------------------------------------------
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHH-----------------------------------------------------
Confidence 467899999999999999999999984
Q ss_pred CCCCCcccchhhHHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHH
Q psy2733 106 MLDTPSAECSGILIKQDFVLLRNGCN---VNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVL 182 (644)
Q Consensus 106 ~~~~~~~~~t~L~~a~v~~Ll~~gad---~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~ 182 (644)
++.|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++..+..|.||||+|+.
T Consensus 29 --------------------l~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 29 --------------------LGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA-AGAGVLVAERGGHTALHLACR 87 (282)
T ss_dssp --------------------HHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTSCCHHHHHTT
T ss_pred --------------------HhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHH
Confidence 444444 56788899999999999999999999999 799999999999999999999
Q ss_pred cCCHHHHHHHHHhcCCccCCc-----------CCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHH
Q psy2733 183 RGNMKVTEKILALNRNLATVP-----------KTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVG 251 (644)
Q Consensus 183 ~g~~~~v~~Ll~~~~~~~~~~-----------~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~ 251 (644)
.|+.+++++|++.++...... ....+.++++.++..+....+..++...+.+++.+|..|.||||+|+.
T Consensus 88 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 167 (282)
T 1oy3_D 88 VRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVI 167 (282)
T ss_dssp TTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHH
T ss_pred cCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHH
Confidence 999999999999886643211 123466778877776665555555545578899999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCcccCC-CCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCC
Q psy2733 252 QGQTSVINYLMLRDVALDIQDID-GNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGA 330 (644)
Q Consensus 252 ~g~~~iv~~Ll~~gadvn~~d~~-G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Ga 330 (644)
.|+.+++++|+++|++++.++.. |+||||+|+..++ .+++++|+++|+
T Consensus 168 ~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~-------------------------------~~~v~~Ll~~ga 216 (282)
T 1oy3_D 168 HKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQA-------------------------------ASVLELLLKAGA 216 (282)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC-------------------------------HHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCC-------------------------------HHHHHHHHHcCC
Confidence 99999999999999999999865 9999999999998 779999999999
Q ss_pred CCCCCCCCCCCcchhhhcCCc--HHHHHHHHhhhhccccCccccchhhhhhh
Q psy2733 331 PLSLENNNRQKPLDLILEDTS--LLNEIMEHAREYVTDLTNENNKVVTAISQ 380 (644)
Q Consensus 331 di~~~n~~G~TpL~~A~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (644)
+++.+|..|+||||+|+..++ +++.|+ +...+....+..+.+++..
T Consensus 217 d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll----~~ga~~~~~~~~g~tpl~~ 264 (282)
T 1oy3_D 217 DPTARMYGGRTPLGSALLRPNPILARLLR----AHGAPEPEDGGDKLSPCSS 264 (282)
T ss_dssp CTTCCCTTSCCHHHHHHTSSCHHHHHHHH----HTTCCCCCCC---------
T ss_pred CCcccccCCCCHHHHHHHcCCcHHHHHHH----HcCCCcCcCCCcccccccc
Confidence 999999999999999996543 333333 3444555555555555543
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.8e-33 Score=276.17 Aligned_cols=227 Identities=20% Similarity=0.248 Sum_probs=204.6
Q ss_pred CcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcccccccccccccC
Q psy2733 26 VYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNED 105 (644)
Q Consensus 26 ~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (644)
++..|..|.|||++|+..|+.+++++
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~------------------------------------------------------ 27 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRE------------------------------------------------------ 27 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHH------------------------------------------------------
T ss_pred ccccccccchHHHHHHHcCChHHHHH------------------------------------------------------
Confidence 45678899999999999999999987
Q ss_pred CCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccC-CCCCcHHHHHHHcC
Q psy2733 106 MLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLEN-SKGFNILNYAVLRG 184 (644)
Q Consensus 106 ~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpL~~A~~~g 184 (644)
|++.|++++..+..|.||||+|+..|+.+++++|++ .+.+++..+ ..|.||||+|+..|
T Consensus 28 -------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 28 -------------------LVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYIS-KGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp -------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred -------------------HHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHH-cCCcchhhcCCcCCChhHHHHHcC
Confidence 778888888899999999999999999999999999 677776554 45999999999999
Q ss_pred CHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCC-HHHHHHHHH
Q psy2733 185 NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQ-TSVINYLML 263 (644)
Q Consensus 185 ~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~-~~iv~~Ll~ 263 (644)
+.+++++|++.++++.. .+..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..++ .+++++|++
T Consensus 88 ~~~~v~~Ll~~g~~~~~--~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 164 (240)
T 3eu9_A 88 HLSMVVQLMKYGADPSL--IDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT 164 (240)
T ss_dssp CHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred CHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence 99999999999888765 567899999999999999999999998 89999999999999999997766 899999999
Q ss_pred CCCCCCcccC-CCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCc
Q psy2733 264 RDVALDIQDI-DGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKP 342 (644)
Q Consensus 264 ~gadvn~~d~-~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~Tp 342 (644)
.|++++..+. .|.||||+|+..++ .+++++|+++|++++.+|..|+||
T Consensus 165 ~~~~~~~~~~~~g~t~L~~A~~~~~-------------------------------~~~v~~Ll~~g~~~~~~~~~g~t~ 213 (240)
T 3eu9_A 165 FNVSVNLGDKYHKNTALHWAVLAGN-------------------------------TTVISLLLEAGANVDAQNIKGESA 213 (240)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHHTC-------------------------------HHHHHHHHHHTCCTTCBCTTSCBH
T ss_pred cCCCcchhhccCCCcHHHHHHHcCC-------------------------------HHHHHHHHHcCCCCCCcCCCCCCH
Confidence 9999999997 99999999999998 779999999999999999999999
Q ss_pred chhhhcCC--cHHHHHHHHh
Q psy2733 343 LDLILEDT--SLLNEIMEHA 360 (644)
Q Consensus 343 L~~A~~~~--~~~~~l~~~~ 360 (644)
|++|++.+ ++++.|++..
T Consensus 214 l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 214 LDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp HHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHcCcHHHHHHHHHhh
Confidence 99999654 3455555433
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.4e-32 Score=267.85 Aligned_cols=192 Identities=21% Similarity=0.244 Sum_probs=181.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 26 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------------------- 76 (223)
T 2f8y_A 26 ETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQI----------------------------- 76 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH-----------------------------
T ss_pred CchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH-----------------------------
Confidence 599999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHh
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGC-NVNIQDNNQDTPMHDAVAKGFEEIQLLLL 159 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~ga-d~n~~d~~G~TpL~~A~~~g~~~iv~~Ll 159 (644)
|++.+. +++..+..|.||||+|+..|+.+++++|+
T Consensus 77 --------------------------------------------Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 112 (223)
T 2f8y_A 77 --------------------------------------------LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI 112 (223)
T ss_dssp --------------------------------------------HHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred --------------------------------------------HHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHH
Confidence 555554 67778889999999999999999999999
Q ss_pred cCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC
Q psy2733 160 SHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD 239 (644)
Q Consensus 160 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d 239 (644)
+ .+++++..+..|.||||+|+..|+.+++++|++.++++.. .+..|.||||+|+..|+.+++++|++. |++++.+|
T Consensus 113 ~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~ 188 (223)
T 2f8y_A 113 N-SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM--QNNREETPLFLAAREGSYETAKVLLDH-FANRDITD 188 (223)
T ss_dssp H-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCC
T ss_pred H-cCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccc
Confidence 9 7999999999999999999999999999999999988765 568899999999999999999999998 89999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy2733 240 LKKRTPLMAAVGQGQTSVINYLMLRDVALD 269 (644)
Q Consensus 240 ~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn 269 (644)
..|.|||++|+..|+.+++++|+++|+...
T Consensus 189 ~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 189 HMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred ccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 999999999999999999999999998754
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1e-32 Score=273.55 Aligned_cols=199 Identities=20% Similarity=0.182 Sum_probs=171.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHC-CCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLAR-GACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKV 78 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~-Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~ 78 (644)
+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++| ..++++..
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~------------------ 65 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVF------------------ 65 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG------------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcc------------------
Confidence 6999999999999999999998 999999999999999999999999999996 55544311
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy2733 79 QRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLL 158 (644)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~L 158 (644)
...+..|..|.||||+|+..|+.+++++|
T Consensus 66 ---------------------------------------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 94 (232)
T 2rfa_A 66 ---------------------------------------------------EPMTSELYEGQTALHIAVINQNVNLVRAL 94 (232)
T ss_dssp ---------------------------------------------------CCCCSTTTTTCCHHHHHHHTTCHHHHHHH
T ss_pred ---------------------------------------------------ccccccCCCCcCHHHHHHHcCCHHHHHHH
Confidence 11255678999999999999999999999
Q ss_pred hcCCCCCccccCC-------------CCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHH-
Q psy2733 159 LSHPEVNLYLENS-------------KGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIV- 224 (644)
Q Consensus 159 l~~~~~~~~~~d~-------------~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v- 224 (644)
++ .|++++..+. .|.||||+|+..|+.+++++|++.|+++.. .|..|+||||+|+..|+.+++
T Consensus 95 l~-~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~t~L~~A~~~~~~~~~~ 171 (232)
T 2rfa_A 95 LA-RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA--QDSLGNTVLHILILQPNKTFAC 171 (232)
T ss_dssp HH-TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHTCSCHHHHH
T ss_pred Hh-CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCChHHHH
Confidence 99 7999988765 799999999999999999999999887765 567899999999999998887
Q ss_pred ---HHHHHhcCCCc------ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc
Q psy2733 225 ---ELLVEKYKVNI------NALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQD 272 (644)
Q Consensus 225 ---~~Ll~~~g~~i------n~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d 272 (644)
++|++. |+++ +.+|..|+||||+|+..|+.+++++|+++|.+.....
T Consensus 172 ~i~~~Ll~~-g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 172 QMYNLLLSY-DGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp HHHHHHHHT-TCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHhc-CCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhh
Confidence 888887 6776 5888999999999999999999999999887765443
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2e-33 Score=279.74 Aligned_cols=207 Identities=19% Similarity=0.286 Sum_probs=186.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCC----CCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGA----CVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTE 76 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga----~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~ 76 (644)
+||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~------------------------- 63 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEA------------------------- 63 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHC-------------------------
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHH-------------------------
Confidence 699999999999999999998865 789999999999999999999999987
Q ss_pred cccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy2733 77 KVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQL 156 (644)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~ 156 (644)
|+++|++++..|..|+||||+|+..|+.++++
T Consensus 64 ------------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 95 (236)
T 1ikn_D 64 ------------------------------------------------LLGAGCDPELRDFRGNTPLHLACEQGCLASVG 95 (236)
T ss_dssp ------------------------------------------------CCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred ------------------------------------------------HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 77788888999999999999999999999999
Q ss_pred HHhcCCCCC------ccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCC-CCchHHHHHHhcCcHHHHHHHHH
Q psy2733 157 LLLSHPEVN------LYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTS-DGFTPLHVACFNDHIEIVELLVE 229 (644)
Q Consensus 157 ~Ll~~~~~~------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~-~g~T~Lh~A~~~g~~~~v~~Ll~ 229 (644)
+|++ .+.+ ++..+..|.||||+|+..|+.+++++|++.++++.. .+. .|+||||+|+..|+.+++++|++
T Consensus 96 ~Ll~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 172 (236)
T 1ikn_D 96 VLTQ-SCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA--QEPCNGRTALHLAVDLQNPDLVSLLLK 172 (236)
T ss_dssp HHHH-STTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC--CCTTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHh-cccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999 5544 577888999999999999999999999999988766 444 89999999999999999999999
Q ss_pred hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--cccCCCCcHHHHHHH
Q psy2733 230 KYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALD--IQDIDGNGLLHFLFI 284 (644)
Q Consensus 230 ~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn--~~d~~G~T~Lh~A~~ 284 (644)
. |++++.+|..|.||||+|+..|+.+++++|+++|++.. .++..|.|+...+..
T Consensus 173 ~-ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 173 C-GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp T-TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred c-CCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 8 89999999999999999999999999999999999876 778888888765543
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=4.9e-32 Score=268.60 Aligned_cols=179 Identities=23% Similarity=0.277 Sum_probs=160.2
Q ss_pred HHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCc-----cccCCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q psy2733 125 LLRN-GCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNL-----YLENSKGFNILNYAVLRGNMKVTEKILALNRN 198 (644)
Q Consensus 125 Ll~~-gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~-----~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 198 (644)
|++. |++++..|..|+||||+|+..|+.+++++|++ .+.++ +..+..|.||||+|+..|+.+++++|++.+++
T Consensus 22 Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 100 (232)
T 2rfa_A 22 LLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLME-AAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGAS 100 (232)
T ss_dssp HHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH-cCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 5655 88899999999999999999999999999999 67776 66778999999999999999999999999988
Q ss_pred ccCCcC-----------CCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHH----HHHHH
Q psy2733 199 LATVPK-----------TSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVI----NYLML 263 (644)
Q Consensus 199 ~~~~~~-----------d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv----~~Ll~ 263 (644)
+..... +..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++ ++|++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~ 179 (232)
T 2rfa_A 101 VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLS 179 (232)
T ss_dssp TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHH
T ss_pred CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHh
Confidence 766322 23799999999999999999999998 899999999999999999999999988 99999
Q ss_pred CCCCC------CcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCC
Q psy2733 264 RDVAL------DIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLEN 336 (644)
Q Consensus 264 ~gadv------n~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n 336 (644)
+|+++ +.+|..|+||||+|+..++ .+++++|+++|++.....
T Consensus 180 ~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~-------------------------------~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 180 YDGGDHLKSLELVPNNQGLTPFKLAGVEGN-------------------------------IVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp TTCSCSSCCGGGCCCTTSCCHHHHHHHHTC-------------------------------HHHHHHHHHHHHHC----
T ss_pred cCCchhhhhhhccCCCCCCCHHHHHHHcCC-------------------------------HHHHHHHHhcCccchhhh
Confidence 99998 5899999999999999999 789999999998765443
No 43
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=9e-32 Score=260.40 Aligned_cols=189 Identities=25% Similarity=0.268 Sum_probs=175.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCC-CCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGA-CVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga-~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
.||||+||..|+.+.++.|++.+. +++.+|..|+||||+|+..|+.+++++
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------------------- 57 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKA---------------------------- 57 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH----------------------------
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH----------------------------
Confidence 489999999999999999999876 999999999999999999999999987
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHh
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLL 159 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll 159 (644)
|+++|++++..|..|.||||+|+..|+.+++++|+
T Consensus 58 ---------------------------------------------Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 92 (201)
T 3hra_A 58 ---------------------------------------------LIDRGADINLQNSISDSPYLYAGAQGRTEILAYML 92 (201)
T ss_dssp ---------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ---------------------------------------------HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 78888899999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhc-CCccCCcCCCCCchHHHHHHhcCc-----HHHHHHHHHhcCC
Q psy2733 160 SHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALN-RNLATVPKTSDGFTPLHVACFNDH-----IEIVELLVEKYKV 233 (644)
Q Consensus 160 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~-~~~~~~~~d~~g~T~Lh~A~~~g~-----~~~v~~Ll~~~g~ 233 (644)
+..+.+++..+..|.||||+|+..|+.+++++|++.+ .++.. .+..|+||||+|+..++ .+++++|++. |+
T Consensus 93 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~-ga 169 (201)
T 3hra_A 93 KHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF--QNDFGYTALIEAVGLREGNQLYQDIVKLLMEN-GA 169 (201)
T ss_dssp HHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC--CCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT-TC
T ss_pred hccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC--CCCCCCCHHHHHHHhccchhhHHHHHHHHHHC-CC
Confidence 6588899999999999999999999999999999998 55444 55889999999999887 9999999998 89
Q ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy2733 234 NINALDLKKRTPLMAAVGQGQTSVINYLMLRD 265 (644)
Q Consensus 234 ~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~g 265 (644)
+++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 170 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 170 DQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999999999999876
No 44
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.2e-32 Score=278.44 Aligned_cols=221 Identities=18% Similarity=0.185 Sum_probs=172.5
Q ss_pred CCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCccccccccc
Q psy2733 22 RGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIP 100 (644)
Q Consensus 22 ~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (644)
.|+..+..|..|+||||+|+..|+.++|+.| ..
T Consensus 2 ~~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---------------------------------------------- 35 (273)
T 2pnn_A 2 VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPF---------------------------------------------- 35 (273)
T ss_dssp ---------CCCHHHHHHHHHTTCSSTTTTHHHH----------------------------------------------
T ss_pred CcccCCCCCcccchHHHHHHHcCCHHHHHHHHHH----------------------------------------------
Confidence 4667778899999999999999999999875 22
Q ss_pred ccccCCCCCCcccchhhHHHHHHHHHhCCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHhcCCCCC-------c
Q psy2733 101 RMNEDMLDTPSAECSGILIKQDFVLLRNGCNVN----IQDNNQDTPMHDAVAK---GFEEIQLLLLSHPEVN-------L 166 (644)
Q Consensus 101 ~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n----~~d~~G~TpL~~A~~~---g~~~iv~~Ll~~~~~~-------~ 166 (644)
+.+.+++++ ..|..|+||||+|+.. |+.+++++|++ .|++ +
T Consensus 36 ------------------------~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~-~ga~~~~~~~~i 90 (273)
T 2pnn_A 36 ------------------------LQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLD-VARKTDSLKQFV 90 (273)
T ss_dssp ------------------------HHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHH-HHHHTTCHHHHH
T ss_pred ------------------------HhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHH-hhccccchhHHh
Confidence 334555555 3578999999999987 99999999999 4543 2
Q ss_pred ----cccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcC------------CCCCchHHHHHHhcCcHHHHHHHHHh
Q psy2733 167 ----YLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPK------------TSDGFTPLHVACFNDHIEIVELLVEK 230 (644)
Q Consensus 167 ----~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~------------d~~g~T~Lh~A~~~g~~~~v~~Ll~~ 230 (644)
...|..|.||||+|+..|+.+++++|++.++++..... +..|.||||+|+..|+.+++++|++.
T Consensus 91 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 170 (273)
T 2pnn_A 91 NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN 170 (273)
T ss_dssp TCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHC
T ss_pred hcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 22567899999999999999999999999988766322 12699999999999999999999993
Q ss_pred --cCCCcccCCCCCCCHHHHHHHcCC---------HHHHHHHHHCCCCCC-------cccCCCCcHHHHHHHcCCccccc
Q psy2733 231 --YKVNINALDLKKRTPLMAAVGQGQ---------TSVINYLMLRDVALD-------IQDIDGNGLLHFLFIKKNFYKTP 292 (644)
Q Consensus 231 --~g~~in~~d~~G~TpL~~Aa~~g~---------~~iv~~Ll~~gadvn-------~~d~~G~T~Lh~A~~~~~~~~~~ 292 (644)
.|++++.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..++
T Consensus 171 ~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~----- 245 (273)
T 2pnn_A 171 SWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK----- 245 (273)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC-----
T ss_pred ccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh-----
Confidence 389999999999999999999998 899999999999997 489999999999999999
Q ss_pred ccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCC-CCCCCCCCCCCcch
Q psy2733 293 ITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGA-PLSLENNNRQKPLD 344 (644)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Ga-di~~~n~~G~TpL~ 344 (644)
.+++++|+++|| |+......+.+|-+
T Consensus 246 --------------------------~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 246 --------------------------IGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp --------------------------HHHHHHHHHHHTC--------------
T ss_pred --------------------------HHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 789999999999 88888888777753
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.4e-30 Score=252.10 Aligned_cols=170 Identities=22% Similarity=0.228 Sum_probs=156.2
Q ss_pred hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCC
Q psy2733 127 RNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTS 206 (644)
Q Consensus 127 ~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~ 206 (644)
..+.+++..|.+|+||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.+..... ..+.
T Consensus 27 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~ 104 (201)
T 3hra_A 27 DTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALID-RGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLN-KHNR 104 (201)
T ss_dssp CTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT-CCCT
T ss_pred cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccc-cccC
Confidence 3445888899999999999999999999999999 7999999999999999999999999999999965543322 2558
Q ss_pred CCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCC-----HHHHHHHHHCCCCCCcccCCCCcHHHH
Q psy2733 207 DGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQ-----TSVINYLMLRDVALDIQDIDGNGLLHF 281 (644)
Q Consensus 207 ~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~-----~~iv~~Ll~~gadvn~~d~~G~T~Lh~ 281 (644)
.|.||||+|+..|+.+++++|++.++++++.+|..|.||||+|+..++ .+++++|+++|++++.+|..|+||||+
T Consensus 105 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 184 (201)
T 3hra_A 105 YGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDY 184 (201)
T ss_dssp TSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHH
Confidence 899999999999999999999999559999999999999999999998 999999999999999999999999999
Q ss_pred HHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcC
Q psy2733 282 LFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHG 329 (644)
Q Consensus 282 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~G 329 (644)
|+..++ .+++++|+++|
T Consensus 185 A~~~~~-------------------------------~~~~~~Ll~~G 201 (201)
T 3hra_A 185 ANQKGY-------------------------------TEISKILAQYN 201 (201)
T ss_dssp HHHHTC-------------------------------HHHHHHHHTCC
T ss_pred HHHcCC-------------------------------HhHHHHHHhcC
Confidence 999999 77999999987
No 46
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.4e-32 Score=285.14 Aligned_cols=200 Identities=19% Similarity=0.128 Sum_probs=169.5
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcc-cCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 3 LLHILAYQGCVEELNILLARGACVYY-PDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 3 pLh~Aa~~G~~e~vk~LL~~Ga~~n~-~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
.+|+|+..+..+++++|++.|+++|. +|..|+||||+|+..|+.++|++
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~------------------------------ 149 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKH------------------------------ 149 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHH------------------------------
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHH------------------------------
Confidence 45888888889999999999999999 89999999999999999999987
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHH
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGF---EEIQLLL 158 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~---~~iv~~L 158 (644)
|+++|+++|.+|..|+||||+|+..|+ .++++.|
T Consensus 150 -------------------------------------------Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~l 186 (327)
T 1sw6_A 150 -------------------------------------------LVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 186 (327)
T ss_dssp -------------------------------------------HHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHH
T ss_pred -------------------------------------------HHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHH
Confidence 888999999999999999999999998 5677777
Q ss_pred hcCCCCCccccCCCCCcHHHHHHH----cCCHHHHHHHHHh--------------------cCCccCCcCCCCCchHHHH
Q psy2733 159 LSHPEVNLYLENSKGFNILNYAVL----RGNMKVTEKILAL--------------------NRNLATVPKTSDGFTPLHV 214 (644)
Q Consensus 159 l~~~~~~~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~--------------------~~~~~~~~~d~~g~T~Lh~ 214 (644)
++....+++.++..|.||||+|+. .|+.++++.|++. ++++.. .+..|.||||+
T Consensus 187 l~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~--~~~~g~t~L~~ 264 (327)
T 1sw6_A 187 LDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND--KNGERKDSILE 264 (327)
T ss_dssp HHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC------------------CHHHH
T ss_pred HHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc--ccccCCChhHH
Confidence 764336799999999999999999 8999999999987 444433 56889999999
Q ss_pred HHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcC
Q psy2733 215 ACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKK 286 (644)
Q Consensus 215 A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~ 286 (644)
|+. +++|++. +++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 265 a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 265 NLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 996 8999987 68999999999999999999999999999999999999999999999998654
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.3e-31 Score=270.05 Aligned_cols=201 Identities=18% Similarity=0.179 Sum_probs=170.5
Q ss_pred CcHHHHHHHcCCHH----HHHHHHHCCCCCcc----cCCCCCcHHHHHHhc---CCHHHHHHH-hhccCCCccchhhhhh
Q psy2733 1 KTLLHILAYQGCVE----ELNILLARGACVYY----PDDAGDTALHYAAFG---NKPDAIQIN-SHVSGANRSRKHIYKE 68 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e----~vk~LL~~Ga~~n~----~d~~G~TpLh~Aa~~---g~~eiv~lL-~~~a~~~~~~~~~~~~ 68 (644)
+||||+||..|+.+ ++++|++.|++++. +|..|+||||+|+.. |+.+++++| ..+++++....
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~----- 77 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP----- 77 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC-----
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh-----
Confidence 58999999999997 66778889999998 899999999999999 999999999 77777654100
Q ss_pred hhhccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy2733 69 RHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVA 148 (644)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~ 148 (644)
++. ......|..|.||||+|+.
T Consensus 78 --------------------------------------------------------~~~--~~~~~~d~~g~t~L~~A~~ 99 (256)
T 2etb_A 78 --------------------------------------------------------LVN--AQCTDEFYQGHSALHIAIE 99 (256)
T ss_dssp --------------------------------------------------------GGG--CCCCSTTTTTCCHHHHHHH
T ss_pred --------------------------------------------------------hcc--cccccccccCCCHHHHHHH
Confidence 111 1223456789999999999
Q ss_pred cCCHHHHHHHhcCCCCCccccCCC-------------CCcHHHHHHHcCCHHHHHHHHH---hcCCccCCcCCCCCchHH
Q psy2733 149 KGFEEIQLLLLSHPEVNLYLENSK-------------GFNILNYAVLRGNMKVTEKILA---LNRNLATVPKTSDGFTPL 212 (644)
Q Consensus 149 ~g~~~iv~~Ll~~~~~~~~~~d~~-------------g~tpL~~A~~~g~~~~v~~Ll~---~~~~~~~~~~d~~g~T~L 212 (644)
.|+.+++++|++ .|++++..+.. |.||||+|+..|+.+++++|++ .++++.. .|..|+|||
T Consensus 100 ~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~--~d~~g~TpL 176 (256)
T 2etb_A 100 KRSLQCVKLLVE-NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA--TDSLGNTVL 176 (256)
T ss_dssp TTCHHHHHHHHH-TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC--CCTTSCCHH
T ss_pred cCCHHHHHHHHH-cCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc--cCCCCCCHH
Confidence 999999999999 79999999886 8999999999999999999999 7777655 567899999
Q ss_pred HHHHh--cCcHH-------HHHHHHHhcCCCc-------ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q psy2733 213 HVACF--NDHIE-------IVELLVEKYKVNI-------NALDLKKRTPLMAAVGQGQTSVINYLMLRDVAL 268 (644)
Q Consensus 213 h~A~~--~g~~~-------~v~~Ll~~~g~~i-------n~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadv 268 (644)
|+|+. .++.+ ++++|++. |+++ +.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 177 h~A~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 177 HALVMIADNSPENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcccCCchhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 99998 77877 89999988 7888 888999999999999999999999999887664
No 48
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.4e-30 Score=245.87 Aligned_cols=159 Identities=29% Similarity=0.385 Sum_probs=147.7
Q ss_pred cHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCc
Q psy2733 141 TPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDH 220 (644)
Q Consensus 141 TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~ 220 (644)
++|+.|++.|+.++|+.|++ .|++++.+|..|.||||+|+..++.++++.|++.++++.. .|..|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~-~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~--~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIE-NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA--KDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh--hccCCCCHHHHHHHcCC
Confidence 57999999999999999999 7999999999999999999999999999999999988766 66899999999999999
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCch
Q psy2733 221 IEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVP 300 (644)
Q Consensus 221 ~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~ 300 (644)
.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..++
T Consensus 83 ~~~v~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~------------- 148 (169)
T 4gpm_A 83 KEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGN------------- 148 (169)
T ss_dssp HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-------------
T ss_pred HHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC-------------
Confidence 9999999998 89999999999999999999999999999999999999999999999999999998
Q ss_pred hHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCC
Q psy2733 301 IYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSL 334 (644)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~ 334 (644)
.+++++|+++||+++.
T Consensus 149 ------------------~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 149 ------------------EEVVKLLEKQGGWLEH 164 (169)
T ss_dssp ------------------HHHHHHHHTC------
T ss_pred ------------------HHHHHHHHHCCCCcCC
Confidence 7799999999999874
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2e-31 Score=271.31 Aligned_cols=213 Identities=16% Similarity=0.189 Sum_probs=173.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHH----CCCCCc----ccCCCCCcHHHHHHhc---CCHHHHHHH-hhccCCCccchhhhhh
Q psy2733 1 KTLLHILAYQGCVEELNILLA----RGACVY----YPDDAGDTALHYAAFG---NKPDAIQIN-SHVSGANRSRKHIYKE 68 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~----~Ga~~n----~~d~~G~TpLh~Aa~~---g~~eiv~lL-~~~a~~~~~~~~~~~~ 68 (644)
+||||+||..|+.++|+.|++ .+++++ .+|..|+||||+|+.. |+.++|++| ..+++.+.
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~-------- 85 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS-------- 85 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC--------
T ss_pred chHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc--------
Confidence 489999999999999998887 566665 4588999999999987 999999999 77776543
Q ss_pred hhhccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy2733 69 RHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVA 148 (644)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~ 148 (644)
++.++.. .....|..|+||||+|+.
T Consensus 86 -----------------------------------------------------~~~~i~~--~~~~~d~~g~tpL~~A~~ 110 (273)
T 2pnn_A 86 -----------------------------------------------------LKQFVNA--SYTDSYYKGQTALHIAIE 110 (273)
T ss_dssp -----------------------------------------------------HHHHHTC--CCCSTTTTTCCHHHHHHH
T ss_pred -----------------------------------------------------hhHHhhc--ccccccCCCCCHHHHHHH
Confidence 1122322 233456789999999999
Q ss_pred cCCHHHHHHHhcCCCCCccccCC--------------CCCcHHHHHHHcCCHHHHHHHHH---hcCCccCCcCCCCCchH
Q psy2733 149 KGFEEIQLLLLSHPEVNLYLENS--------------KGFNILNYAVLRGNMKVTEKILA---LNRNLATVPKTSDGFTP 211 (644)
Q Consensus 149 ~g~~~iv~~Ll~~~~~~~~~~d~--------------~g~tpL~~A~~~g~~~~v~~Ll~---~~~~~~~~~~d~~g~T~ 211 (644)
.|+.+++++|++ .|++++..+. .|.||||+|+..|+.+++++|++ .++++.. .|..|+||
T Consensus 111 ~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~--~d~~g~tp 187 (273)
T 2pnn_A 111 RRNMTLVTLLVE-NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA--RDSVGNTV 187 (273)
T ss_dssp TTCHHHHHHHHH-TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC--CCTTSCCH
T ss_pred cCCHHHHHHHHH-CCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee--eCCCCCcH
Confidence 999999999999 7999999987 79999999999999999999999 7877765 66899999
Q ss_pred HHHHHhcCc---------HHHHHHHHHhcCCCcc-------cCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCcccCC
Q psy2733 212 LHVACFNDH---------IEIVELLVEKYKVNIN-------ALDLKKRTPLMAAVGQGQTSVINYLMLRDV-ALDIQDID 274 (644)
Q Consensus 212 Lh~A~~~g~---------~~~v~~Ll~~~g~~in-------~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~ga-dvn~~d~~ 274 (644)
||+|+..|+ .+++++|++. |++++ .+|..|+||||+|+..|+.+++++|+++|+ |+......
T Consensus 188 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~ 266 (273)
T 2pnn_A 188 LHALVEVADNTVDNTKFVTSMYNEILIL-GAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAA 266 (273)
T ss_dssp HHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------
T ss_pred HHHHHHccCcchhHHHHHHHHHHHHHHh-hhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhh
Confidence 999999888 7999999998 78886 589999999999999999999999999999 88877777
Q ss_pred CCcHHH
Q psy2733 275 GNGLLH 280 (644)
Q Consensus 275 G~T~Lh 280 (644)
+.+|-+
T Consensus 267 ~~~~~~ 272 (273)
T 2pnn_A 267 AHHHHH 272 (273)
T ss_dssp ------
T ss_pred hhhccC
Confidence 776643
No 50
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.6e-30 Score=245.57 Aligned_cols=159 Identities=33% Similarity=0.470 Sum_probs=119.0
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
++|+.||+.|+.++|++||+.|+++|.+|.+|+||||+|+..++.+++++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~------------------------------ 55 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKL------------------------------ 55 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH------------------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHH------------------------------
Confidence 46888999999999999999999999999999999999998888888876
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcC
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 161 (644)
|++.|++++.+|.+|+||||+|+..|+.+++++|++
T Consensus 56 -------------------------------------------ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~- 91 (169)
T 4gpm_A 56 -------------------------------------------LISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLIS- 91 (169)
T ss_dssp -------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-
T ss_pred -------------------------------------------HHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHH-
Confidence 677788888888888888888888888888888888
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCC
Q psy2733 162 PEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK 241 (644)
Q Consensus 162 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~ 241 (644)
.|++++.+|..|+ ||||+|+..|+.+++++|++. |++++.+|..
T Consensus 92 ~gadvn~~d~~G~-----------------------------------TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~ 135 (169)
T 4gpm_A 92 KGADVNAKDSDGR-----------------------------------TPLHHAAENGHKEVVKLLISK-GADVNTSDSD 135 (169)
T ss_dssp TTCCTTCCCTTSC-----------------------------------CHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTT
T ss_pred CcCCCCCCCCCCC-----------------------------------CHHHHHHHcCCHHHHHHHHHc-CCCccccCCC
Confidence 6777766655555 455555555555566666655 5667777777
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCc
Q psy2733 242 KRTPLMAAVGQGQTSVINYLMLRDVALDI 270 (644)
Q Consensus 242 G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~ 270 (644)
|+||||+|+..|+.+++++|+++||+++-
T Consensus 136 G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 136 GRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 77777777777777777777777777643
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.8e-31 Score=268.99 Aligned_cols=176 Identities=18% Similarity=0.204 Sum_probs=158.5
Q ss_pred HHHHhCCCCCCC----CCCCCCcHHHHHHHc---CCHHHHHHHhcCCCCCccc-----------cCCCCCcHHHHHHHcC
Q psy2733 123 FVLLRNGCNVNI----QDNNQDTPMHDAVAK---GFEEIQLLLLSHPEVNLYL-----------ENSKGFNILNYAVLRG 184 (644)
Q Consensus 123 ~~Ll~~gad~n~----~d~~G~TpL~~A~~~---g~~~iv~~Ll~~~~~~~~~-----------~d~~g~tpL~~A~~~g 184 (644)
++|++.|++++. .|..|+||||+|+.. |+.+++++|++ .|++++. .|..|.||||+|+..|
T Consensus 23 ~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g 101 (256)
T 2etb_A 23 EYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQ-IDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKR 101 (256)
T ss_dssp HHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHH-HHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTT
T ss_pred HHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHh-cCCcccchhhhcccccccccccCCCHHHHHHHcC
Confidence 347788999998 899999999999999 99999999999 5666553 3367999999999999
Q ss_pred CHHHHHHHHHhcCCccCCcCCCC-------------CchHHHHHHhcCcHHHHHHHHHh--cCCCcccCCCCCCCHHHHH
Q psy2733 185 NMKVTEKILALNRNLATVPKTSD-------------GFTPLHVACFNDHIEIVELLVEK--YKVNINALDLKKRTPLMAA 249 (644)
Q Consensus 185 ~~~~v~~Ll~~~~~~~~~~~d~~-------------g~T~Lh~A~~~g~~~~v~~Ll~~--~g~~in~~d~~G~TpL~~A 249 (644)
+.+++++|++.++++.. .+.. |.||||+|+..|+.+++++|++. .|++++.+|..|+||||+|
T Consensus 102 ~~~~v~~Ll~~ga~~~~--~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A 179 (256)
T 2etb_A 102 SLQCVKLLVENGADVHL--RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHAL 179 (256)
T ss_dssp CHHHHHHHHHTTCCTTC--CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHH
T ss_pred CHHHHHHHHHcCCCCCc--ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHH
Confidence 99999999999988766 3333 99999999999999999999993 3899999999999999999
Q ss_pred HH--cCCHH-------HHHHHHHCCCCC-------CcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCC
Q psy2733 250 VG--QGQTS-------VINYLMLRDVAL-------DIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSN 313 (644)
Q Consensus 250 a~--~g~~~-------iv~~Ll~~gadv-------n~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (644)
+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..++
T Consensus 180 ~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~-------------------------- 233 (256)
T 2etb_A 180 VMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGK-------------------------- 233 (256)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTC--------------------------
T ss_pred HHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCC--------------------------
Confidence 99 88888 999999999999 9999999999999999999
Q ss_pred ccchHHHHHHHHHHcCCCC
Q psy2733 314 EHGILLAVFLFLVKHGAPL 332 (644)
Q Consensus 314 ~~~~~~~iv~~Ll~~Gadi 332 (644)
.+++++|+++|++.
T Consensus 234 -----~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 234 -----IEIFRHILQREFSG 247 (256)
T ss_dssp -----HHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHhCCCCC
Confidence 77999999998754
No 52
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=3.9e-31 Score=272.36 Aligned_cols=201 Identities=23% Similarity=0.270 Sum_probs=178.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~----------------------------- 124 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEY----------------------------- 124 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH-----------------------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH-----------------------------
Confidence 599999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++..|..|.||||+|+..++.++++.++.
T Consensus 125 --------------------------------------------Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 125 --------------------------------------------LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp --------------------------------------------HHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred --------------------------------------------HHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 788888899999999999999999999999999988
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCC
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDL 240 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~ 240 (644)
..+.+++..+..+.++++ ..++.++..+..... ..+..|.||||+|+..|+.+++++|++. |++++.+|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~ 230 (299)
T 1s70_B 161 RQGVDIEAARKEEERIML--------RDARQWLNSGHINDV-RHAKSGGTALHVAAAKGYTEVLKLLIQA-RYDVNIKDY 230 (299)
T ss_dssp HHTCCHHHHHHHHHHHHH--------HHHHHHHHHTCCCCC-CCTTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCT
T ss_pred hcCCCchhhhhhhhhHHH--------HHHHHHHhccCcchh-hhcCCCCCHHHHHHHCCcHHHHHHHHHc-CCCCCCcCC
Confidence 667776655544444443 334556666654433 3457899999999999999999999998 899999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHH
Q psy2733 241 KKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFI 284 (644)
Q Consensus 241 ~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~ 284 (644)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|..
T Consensus 231 ~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 231 DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999964
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=3.9e-30 Score=259.60 Aligned_cols=202 Identities=18% Similarity=0.213 Sum_probs=172.2
Q ss_pred CcHHHHHHHcCCHHHH----HHHHHCCCCCcccC----CCCCcHHHHHH---hcCCHHHHHHH-hhccCCCccchhhhhh
Q psy2733 1 KTLLHILAYQGCVEEL----NILLARGACVYYPD----DAGDTALHYAA---FGNKPDAIQIN-SHVSGANRSRKHIYKE 68 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~v----k~LL~~Ga~~n~~d----~~G~TpLh~Aa---~~g~~eiv~lL-~~~a~~~~~~~~~~~~ 68 (644)
+|+||.||+.|+.+.+ ++|++.|++++..+ ..|+||||+|+ ..|+.+++++| ..+++....
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~------- 78 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM------- 78 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH-------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch-------
Confidence 5899999999999954 45555999998776 77999999999 77999999999 777665430
Q ss_pred hhhccccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy2733 69 RHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVA 148 (644)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~ 148 (644)
..++ ..+++..|..|+||||+|+.
T Consensus 79 ------------------------------------------------------~~~~--~~~~~~~d~~g~t~L~~A~~ 102 (260)
T 3jxi_A 79 ------------------------------------------------------REFI--NSPFRDVYYRGQTALHIAIE 102 (260)
T ss_dssp ------------------------------------------------------HHHH--TCCBCCSSEESBCHHHHHHH
T ss_pred ------------------------------------------------------Hhhh--cccccccccCCCCHHHHHHH
Confidence 0111 23455567789999999999
Q ss_pred cCCHHHHHHHhcCCCCCccccC--------------CCCCcHHHHHHHcCCHHHHHHHHH---hcCCccCCcCCCCCchH
Q psy2733 149 KGFEEIQLLLLSHPEVNLYLEN--------------SKGFNILNYAVLRGNMKVTEKILA---LNRNLATVPKTSDGFTP 211 (644)
Q Consensus 149 ~g~~~iv~~Ll~~~~~~~~~~d--------------~~g~tpL~~A~~~g~~~~v~~Ll~---~~~~~~~~~~d~~g~T~ 211 (644)
.|+.+++++|++ .|++++..+ ..|.||||+|+..|+.+++++|++ .++++.. .|..|+||
T Consensus 103 ~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~--~d~~g~Tp 179 (260)
T 3jxi_A 103 RRCKHYVELLVE-KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR--QDSRGNTV 179 (260)
T ss_dssp TTCHHHHHHHHH-TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC--CCTTSCCH
T ss_pred cCCHHHHHHHHh-CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc--cCCCCCcH
Confidence 999999999999 799999998 689999999999999999999999 7777655 66899999
Q ss_pred HHHHHhcCc---------HHHHHHHHHhcCCCc-------ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy2733 212 LHVACFNDH---------IEIVELLVEKYKVNI-------NALDLKKRTPLMAAVGQGQTSVINYLMLRDVALD 269 (644)
Q Consensus 212 Lh~A~~~g~---------~~~v~~Ll~~~g~~i-------n~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn 269 (644)
||+|+..++ .+++++|++. |+++ +.+|..|+||||+|+..|+.+++++|+++|++..
T Consensus 180 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 180 LHALVAIADNTRENTKFVTKMYDLLLIK-CAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHCCSSHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCchhHHHHHHHHHHHHHHh-CcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 999998777 7899999998 7888 6799999999999999999999999999887653
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=4.3e-30 Score=259.32 Aligned_cols=176 Identities=19% Similarity=0.236 Sum_probs=154.5
Q ss_pred HHHhCCCCCCCCC----CCCCcHHHHHH---HcCCHHHHHHHhcCCCC-----------CccccCCCCCcHHHHHHHcCC
Q psy2733 124 VLLRNGCNVNIQD----NNQDTPMHDAV---AKGFEEIQLLLLSHPEV-----------NLYLENSKGFNILNYAVLRGN 185 (644)
Q Consensus 124 ~Ll~~gad~n~~d----~~G~TpL~~A~---~~g~~~iv~~Ll~~~~~-----------~~~~~d~~g~tpL~~A~~~g~ 185 (644)
.|++.|++++..+ ..|+||||+|+ ..|+.+++++|++ .++ ..+..|..|.||||+|+..|+
T Consensus 27 ~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~ 105 (260)
T 3jxi_A 27 FLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLD-IAEKTGNMREFINSPFRDVYYRGQTALHIAIERRC 105 (260)
T ss_dssp HHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHH-HHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTC
T ss_pred HHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHH-hcccccchHhhhcccccccccCCCCHHHHHHHcCC
Confidence 3566777777555 67999999999 7799999999999 443 344556689999999999999
Q ss_pred HHHHHHHHHhcCCccCCcCC------------CCCchHHHHHHhcCcHHHHHHHHH---hcCCCcccCCCCCCCHHHHHH
Q psy2733 186 MKVTEKILALNRNLATVPKT------------SDGFTPLHVACFNDHIEIVELLVE---KYKVNINALDLKKRTPLMAAV 250 (644)
Q Consensus 186 ~~~v~~Ll~~~~~~~~~~~d------------~~g~T~Lh~A~~~g~~~~v~~Ll~---~~g~~in~~d~~G~TpL~~Aa 250 (644)
.+++++|++.++++.....+ ..|+||||+|+..|+.+++++|++ . |++++.+|..|+||||+|+
T Consensus 106 ~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-ga~~~~~d~~g~TpLh~A~ 184 (260)
T 3jxi_A 106 KHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK-QADLRRQDSRGNTVLHALV 184 (260)
T ss_dssp HHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC-CCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc-CCCCcccCCCCCcHHHHHH
Confidence 99999999999887663210 479999999999999999999999 6 8999999999999999999
Q ss_pred HcCC---------HHHHHHHHHCCCCC-------CcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCc
Q psy2733 251 GQGQ---------TSVINYLMLRDVAL-------DIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNE 314 (644)
Q Consensus 251 ~~g~---------~~iv~~Ll~~gadv-------n~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (644)
..|+ .+++++|+++|+++ +.+|..|+||||+|+..++
T Consensus 185 ~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~--------------------------- 237 (260)
T 3jxi_A 185 AIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK--------------------------- 237 (260)
T ss_dssp HHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC---------------------------
T ss_pred HhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC---------------------------
Confidence 9888 79999999999999 7799999999999999999
Q ss_pred cchHHHHHHHHHHcCCCC
Q psy2733 315 HGILLAVFLFLVKHGAPL 332 (644)
Q Consensus 315 ~~~~~~iv~~Ll~~Gadi 332 (644)
.+++++|+++|++.
T Consensus 238 ----~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 238 ----IGIFQHIIRREIAD 251 (260)
T ss_dssp ----HHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCCc
Confidence 78999999999764
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=257.23 Aligned_cols=189 Identities=26% Similarity=0.295 Sum_probs=169.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC--CcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGAC--VYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKV 78 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~--~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~ 78 (644)
++++|.|+..|+++.++.+++.+.+ +|.+|.+|+||||+|+..|+.++|++
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~--------------------------- 129 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQ--------------------------- 129 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHH---------------------------
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHH---------------------------
Confidence 5788999999999999999988776 88899999999999999999999987
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCC-CCCCCCCCCCcHHHHHH-----HcCCH
Q psy2733 79 QRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGC-NVNIQDNNQDTPMHDAV-----AKGFE 152 (644)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~ga-d~n~~d~~G~TpL~~A~-----~~g~~ 152 (644)
|++.|+ +++..|..|+||||+|+ ..++.
T Consensus 130 ----------------------------------------------Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~ 163 (276)
T 4hbd_A 130 ----------------------------------------------LLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDI 163 (276)
T ss_dssp ----------------------------------------------HHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHH
T ss_pred ----------------------------------------------HHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhH
Confidence 777776 88888999999999999 66789
Q ss_pred HHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcC
Q psy2733 153 EIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYK 232 (644)
Q Consensus 153 ~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g 232 (644)
+++++|++ .|...+..+..|.||||+|+..|+.+++++|++.|++++. .|..|+||||+|+..|+.+++++|++..|
T Consensus 164 ~~v~~Ll~-~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~--~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 240 (276)
T 4hbd_A 164 ETVLQLFR-LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV--QDDDGSTALMCACEHGHKEIAGLLLAVPS 240 (276)
T ss_dssp HHHHHHHH-HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHTSTT
T ss_pred HHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC--CCCCCCCHHHHHHHCCCHHHHHHHHhcCC
Confidence 99999999 6888888888999999999999999999999999988766 56889999999999999999999998448
Q ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy2733 233 VNINALDLKKRTPLMAAVGQGQTSVINYLMLRD 265 (644)
Q Consensus 233 ~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~g 265 (644)
++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 241 ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 241 CDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999999999999763
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=3.5e-28 Score=229.44 Aligned_cols=170 Identities=21% Similarity=0.228 Sum_probs=152.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhc
Q psy2733 139 QDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFN 218 (644)
Q Consensus 139 G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~ 218 (644)
+.||||+|+..|+.++++.|++..+..++..+..|.||||+|+..|+.+++++|++.++++.. .+..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI--LAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC--CCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh--hcccCCCHHHHHHHC
Confidence 568999999999999999999954444889999999999999999999999999999988765 567899999999999
Q ss_pred CcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCC
Q psy2733 219 DHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKS 298 (644)
Q Consensus 219 g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~ 298 (644)
|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 80 ~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----------- 147 (172)
T 3v30_A 80 GYTDIVGLLLER-DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY----------- 147 (172)
T ss_dssp TCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC-----------
T ss_pred CCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCc-----------
Confidence 999999999998 89999999999999999999999999999999999999999999999999999998
Q ss_pred chhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCc
Q psy2733 299 VPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKP 342 (644)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~Tp 342 (644)
.+++++|+++|+++..++..|.||
T Consensus 148 --------------------~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 148 --------------------RKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp --------------------HHHHHHHHHHHHHHSCC-------
T ss_pred --------------------HHHHHHHHHHHHHHhcccCCCCCC
Confidence 779999999999999999999887
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=9.9e-28 Score=226.32 Aligned_cols=168 Identities=25% Similarity=0.299 Sum_probs=119.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC-CcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccccccc
Q psy2733 1 KTLLHILAYQGCVEELNILLARGAC-VYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~-~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+||||+||..|+.+++++|++.|.+ ++.+|..|+||||+|+..|+.+++++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------------------- 54 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRF---------------------------- 54 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHH----------------------------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHH----------------------------
Confidence 4899999999999999999999887 78889999999999999999999887
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHh
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLL 159 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll 159 (644)
|+++|++++..|..|.||||+|+..|+.+++++|+
T Consensus 55 ---------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (172)
T 3v30_A 55 ---------------------------------------------LLEWGADPHILAKERESALSLASTGGYTDIVGLLL 89 (172)
T ss_dssp ---------------------------------------------HHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred ---------------------------------------------HHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHH
Confidence 66777888888888999999999999999999998
Q ss_pred cCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC
Q psy2733 160 SHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD 239 (644)
Q Consensus 160 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d 239 (644)
+ .+++++..+..|.||||+|+..|+.+++++|++. |++++.+|
T Consensus 90 ~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------------------------------ga~~~~~~ 132 (172)
T 3v30_A 90 E-RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR------------------------------------GADLTTEA 132 (172)
T ss_dssp T-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT------------------------------------TCCTTCCC
T ss_pred H-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc------------------------------------CCCccccC
Confidence 8 6777776666555555555555555555555444 45555555
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcH
Q psy2733 240 LKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGL 278 (644)
Q Consensus 240 ~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~ 278 (644)
..|.||||+|+..|+.+++++|+++|+++..++..|.||
T Consensus 133 ~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 133 DSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred CCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 555555555555555555555555555555555555444
No 58
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.1e-27 Score=230.43 Aligned_cols=163 Identities=24% Similarity=0.268 Sum_probs=154.8
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchH
Q psy2733 132 VNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTP 211 (644)
Q Consensus 132 ~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~ 211 (644)
+|.+|..|+||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++.++++.. .+..|+||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~ 104 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVE-NFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT--KDFSGKTP 104 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHH-HHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC--CCTTSCCH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHH-hccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCcH
Confidence 46788999999999999999999999999 6999999999999999999999999999999999987765 56789999
Q ss_pred HHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccc
Q psy2733 212 LHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKT 291 (644)
Q Consensus 212 Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~ 291 (644)
||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~---- 179 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGR---- 179 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC----
T ss_pred HHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCc----
Confidence 9999999999999999998 89999999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcC
Q psy2733 292 PITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHG 329 (644)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~G 329 (644)
.+++++|+++|
T Consensus 180 ---------------------------~~~v~~Ll~~~ 190 (192)
T 2rfm_A 180 ---------------------------QEVIKIFTEVR 190 (192)
T ss_dssp ---------------------------HHHHHHHHHHH
T ss_pred ---------------------------HHHHHHHHhcc
Confidence 77999999875
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=2.8e-28 Score=249.02 Aligned_cols=163 Identities=21% Similarity=0.303 Sum_probs=153.0
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCC-CccccCCCCCcHHHHHH-----HcCCHHHHHHHHHhcCCccCCcCC
Q psy2733 132 VNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEV-NLYLENSKGFNILNYAV-----LRGNMKVTEKILALNRNLATVPKT 205 (644)
Q Consensus 132 ~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~-~~~~~d~~g~tpL~~A~-----~~g~~~~v~~Ll~~~~~~~~~~~d 205 (644)
+|..|.+|+||||+|+..|+.+++++|++ .|+ +++..+..|.||||+|+ ..++.++++.|++.+..... .+
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~--~~ 180 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLD-SGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAK--AS 180 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCC--CT
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccc--cC
Confidence 67889999999999999999999999999 676 99999999999999999 67899999999999966544 55
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCcccCCCCcHHHHHHH
Q psy2733 206 SDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLML-RDVALDIQDIDGNGLLHFLFI 284 (644)
Q Consensus 206 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~-~gadvn~~d~~G~T~Lh~A~~ 284 (644)
..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+.
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~ 259 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLAC-EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD 259 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH
Confidence 7899999999999999999999998 89999999999999999999999999999999 899999999999999999999
Q ss_pred cCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcC
Q psy2733 285 KKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHG 329 (644)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~G 329 (644)
.++ .+++++|++++
T Consensus 260 ~g~-------------------------------~~iv~~Ll~~~ 273 (276)
T 4hbd_A 260 AGQ-------------------------------SEIASMLYSRM 273 (276)
T ss_dssp HTC-------------------------------HHHHHHHHHHC
T ss_pred cCC-------------------------------HHHHHHHHhcc
Confidence 999 77999999875
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=2.7e-27 Score=227.64 Aligned_cols=163 Identities=26% Similarity=0.220 Sum_probs=152.7
Q ss_pred CcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCcccccccccccccC
Q psy2733 26 VYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNED 105 (644)
Q Consensus 26 ~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (644)
+|.+|..|+||||+|+..|+.+++++
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~------------------------------------------------------ 53 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDK------------------------------------------------------ 53 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHH------------------------------------------------------
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHH------------------------------------------------------
Confidence 56789999999999999999999987
Q ss_pred CCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCC
Q psy2733 106 MLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGN 185 (644)
Q Consensus 106 ~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~ 185 (644)
|++.|++++..|..|+||||+|+..|+.+++++|++ .+++++..+..|.||||+|+..|+
T Consensus 54 -------------------Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~ 113 (192)
T 2rfm_A 54 -------------------LVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLS-KGSNVNTKDFSGKTPLMWSIIFGY 113 (192)
T ss_dssp -------------------HHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred -------------------HHHhccccccccccCccHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCC
Confidence 666677778889999999999999999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy2733 186 MKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRD 265 (644)
Q Consensus 186 ~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~g 265 (644)
.+++++|++.++++.. .|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 114 ~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 114 SEMSYFLLEHGANVND--RNLEGETPLIVASKYGRSEIVKKLLEL-GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHTTCCSSC--CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999988765 568899999999999999999999998 8999999999999999999999999999999764
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=4.3e-27 Score=219.35 Aligned_cols=156 Identities=24% Similarity=0.301 Sum_probs=107.4
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
||||+|+..|+.+++++|++.|++++.+|..|+||||+|+. |+.+++++
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~------------------------------ 55 (162)
T 1ihb_A 7 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARR------------------------------ 55 (162)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHH------------------------------
T ss_pred hHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHH------------------------------
Confidence 67888888888888888888888888888888888888877 77777776
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcC
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 161 (644)
|+++|++++..|..|+||||+|+..|+.+++++|++
T Consensus 56 -------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~- 91 (162)
T 1ihb_A 56 -------------------------------------------LLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLE- 91 (162)
T ss_dssp -------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-
T ss_pred -------------------------------------------HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-
Confidence 666677777777777778777777777777777777
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCC
Q psy2733 162 PEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK 241 (644)
Q Consensus 162 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~ 241 (644)
.|++++.++..|.||||+|+..|+.+++++|++.+++. ++.+|..
T Consensus 92 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------------------------~~~~~~~ 136 (162)
T 1ihb_A 92 FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN-----------------------------------VGHRNHK 136 (162)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC-----------------------------------TTCCCTT
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC-----------------------------------CCCcCCC
Confidence 56666666555555555555555555555554444332 4556666
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC
Q psy2733 242 KRTPLMAAVGQGQTSVINYLMLRDVA 267 (644)
Q Consensus 242 G~TpL~~Aa~~g~~~iv~~Ll~~gad 267 (644)
|.||||+|+..|+.+++++|+++|+|
T Consensus 137 g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 137 GDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 66666666666666666666666654
No 62
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=4.9e-27 Score=219.00 Aligned_cols=158 Identities=22% Similarity=0.296 Sum_probs=148.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHh
Q psy2733 138 NQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACF 217 (644)
Q Consensus 138 ~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~ 217 (644)
...||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+. |+.+++++|++.++++.. .+..|+||||+|+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQ-NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL--KDRTGFAVIHDAAR 79 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTT-SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHh-CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC--CCCCCCCHHHHHHH
Confidence 45699999999999999999999 799999999999999999999 999999999999987765 56889999999999
Q ss_pred cCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCcccCCCCcHHHHHHHcCCccccccccc
Q psy2733 218 NDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVA-LDIQDIDGNGLLHFLFIKKNFYKTPITRE 296 (644)
Q Consensus 218 ~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gad-vn~~d~~G~T~Lh~A~~~~~~~~~~~~~~ 296 (644)
.|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++
T Consensus 80 ~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~--------- 149 (162)
T 1ihb_A 80 AGFLDTLQTLLEF-QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR--------- 149 (162)
T ss_dssp HTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC---------
T ss_pred cCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC---------
Confidence 9999999999998 899999999999999999999999999999999998 69999999999999999998
Q ss_pred CCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCC
Q psy2733 297 KSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAP 331 (644)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gad 331 (644)
.+++++|+++|||
T Consensus 150 ----------------------~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 150 ----------------------NEVVSLMQANGAG 162 (162)
T ss_dssp ----------------------HHHHHHHHHTC--
T ss_pred ----------------------HHHHHHHHHhCCC
Confidence 7799999999986
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=6.3e-27 Score=219.68 Aligned_cols=160 Identities=20% Similarity=0.244 Sum_probs=151.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHh
Q psy2733 138 NQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACF 217 (644)
Q Consensus 138 ~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~ 217 (644)
.|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++.++++.. .+..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIE-QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL--LGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHH-cCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC--cCCCCCcHHHHHHH
Confidence 58899999999999999999999 6899999999999999999999999999999999887765 56789999999999
Q ss_pred cCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccC
Q psy2733 218 NDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREK 297 (644)
Q Consensus 218 ~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~ 297 (644)
.|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 79 ~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~---------- 147 (167)
T 3v31_A 79 KGYTDIVKMLLDC-GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY---------- 147 (167)
T ss_dssp HTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----------
T ss_pred cCCHHHHHHHHHC-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc----------
Confidence 9999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCC
Q psy2733 298 SVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPL 332 (644)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi 332 (644)
.+++++|+++++++
T Consensus 148 ---------------------~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 148 ---------------------RSVQQVIESHLLKL 161 (167)
T ss_dssp ---------------------HHHHHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHH
Confidence 77999999988664
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=5.1e-27 Score=223.17 Aligned_cols=169 Identities=22% Similarity=0.204 Sum_probs=155.8
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHH
Q psy2733 137 NNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVAC 216 (644)
Q Consensus 137 ~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~ 216 (644)
.++.++||.|+..|+.+++++|++..+.+++..+..|.||||+|+..|+.+++++|++.++++.. .+..|+||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV--MNRGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC--cCCCCCCHHHHHH
Confidence 46789999999999999999999977888999999999999999999999999999999988766 5678999999999
Q ss_pred hcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCccccccccc
Q psy2733 217 FNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITRE 296 (644)
Q Consensus 217 ~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~ 296 (644)
..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 81 ~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~--------- 150 (179)
T 3f6q_A 81 SHGHRDIVQKLLQY-KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLR--------- 150 (179)
T ss_dssp HTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHH---------
T ss_pred HcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHH---------
Confidence 99999999999998 89999999999999999999999999999999999999999999999999988766
Q ss_pred CCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCC
Q psy2733 297 KSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNR 339 (644)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G 339 (644)
.+++++|+++|++++..+..+
T Consensus 151 ----------------------~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 151 ----------------------ELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp ----------------------HHHHHHHHHTTCCCSCBCCCC
T ss_pred ----------------------HHHHHHHHHhhcCcccCCccc
Confidence 679999999999998776554
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.8e-26 Score=217.30 Aligned_cols=154 Identities=33% Similarity=0.462 Sum_probs=100.7
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
|+||+||+.|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 16 ~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~------------------------------ 65 (169)
T 2y1l_E 16 KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEV------------------------------ 65 (169)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH------------------------------
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH------------------------------
Confidence 56777777777777777777777777777777777777777777776665
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcC
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 161 (644)
|+++|++++..|..|.||||+|+..|+.+++++|++
T Consensus 66 -------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~- 101 (169)
T 2y1l_E 66 -------------------------------------------LLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLK- 101 (169)
T ss_dssp -------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-
T ss_pred -------------------------------------------HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-
Confidence 555666666666666666666666666666666666
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCC
Q psy2733 162 PEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK 241 (644)
Q Consensus 162 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~ 241 (644)
.|++++..|. .|+||||+|+..|+.+++++|++. |++++.+|..
T Consensus 102 ~g~~~~~~~~-----------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~ 145 (169)
T 2y1l_E 102 NGADVNANDM-----------------------------------EGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKF 145 (169)
T ss_dssp TTCCTTCCCT-----------------------------------TSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTT
T ss_pred cCCCCCCCCC-----------------------------------CCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCC
Confidence 4555554444 455555555555556666666655 5666666666
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCC
Q psy2733 242 KRTPLMAAVGQGQTSVINYLMLRD 265 (644)
Q Consensus 242 G~TpL~~Aa~~g~~~iv~~Ll~~g 265 (644)
|.||||+|+..|+.+++++|++.|
T Consensus 146 g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 146 GKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcC
Confidence 666666666666666666666654
No 66
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.6e-26 Score=217.62 Aligned_cols=159 Identities=23% Similarity=0.373 Sum_probs=149.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHH
Q psy2733 136 DNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVA 215 (644)
Q Consensus 136 d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A 215 (644)
...+.++|+.|++.|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.++++.. .+..|+||||+|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A 87 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMA-NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA--VDHAGMTPLRLA 87 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--cCCCCCCHHHHH
Confidence 3467799999999999999999999 7999999999999999999999999999999999987765 567899999999
Q ss_pred HhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccc
Q psy2733 216 CFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITR 295 (644)
Q Consensus 216 ~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~ 295 (644)
+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 88 ~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~-------- 158 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKN-GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGN-------- 158 (169)
T ss_dssp HHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC--------
T ss_pred HHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCC--------
Confidence 999999999999998 89999999999999999999999999999999999999999999999999999998
Q ss_pred cCCchhHHhhhhcCCCCCccchHHHHHHHHHHcC
Q psy2733 296 EKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHG 329 (644)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~G 329 (644)
.+++++|+++|
T Consensus 159 -----------------------~~~~~~L~~~G 169 (169)
T 2y1l_E 159 -----------------------EDLAEILQKLN 169 (169)
T ss_dssp -----------------------HHHHHHHHTC-
T ss_pred -----------------------HHHHHHHHHcC
Confidence 77999999876
No 67
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=1.6e-26 Score=216.83 Aligned_cols=157 Identities=24% Similarity=0.292 Sum_probs=98.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------------------- 54 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEF----------------------------- 54 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHH-----------------------------
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHH-----------------------------
Confidence 467777777777777777777777777777777777777777777776665
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++..|..|.||||+|+..|+.+++++|++
T Consensus 55 --------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 90 (167)
T 3v31_A 55 --------------------------------------------LLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLD 90 (167)
T ss_dssp --------------------------------------------HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------------------------------------------HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 555566666666666666666666666666666666
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCC
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDL 240 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~ 240 (644)
.+++++..+..|. ||||+|+..|+.+++++|++. |++++.+|.
T Consensus 91 -~g~~~~~~~~~g~-----------------------------------t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~ 133 (167)
T 3v31_A 91 -CGVDVNEYDWNGG-----------------------------------TPLLYAVHGNHVKCVKMLLES-GADPTIETD 133 (167)
T ss_dssp -HTCCTTCCCTTSC-----------------------------------CHHHHHHHTTCHHHHHHHHHT-TCCTTCCCT
T ss_pred -CCCCCCcCCCCCC-----------------------------------CHHHHHHHcCCHHHHHHHHHc-CCCCCCcCC
Confidence 4555555554444 555555555555555555554 455555555
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC
Q psy2733 241 KKRTPLMAAVGQGQTSVINYLMLRDVA 267 (644)
Q Consensus 241 ~G~TpL~~Aa~~g~~~iv~~Ll~~gad 267 (644)
.|.||||+|+..|+.+++++|++++++
T Consensus 134 ~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 134 SGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 555555555555555555555555433
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1e-28 Score=245.19 Aligned_cols=191 Identities=16% Similarity=0.124 Sum_probs=163.3
Q ss_pred HHHHHhCCCCCCCCC---CCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q psy2733 122 DFVLLRNGCNVNIQD---NNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRN 198 (644)
Q Consensus 122 v~~Ll~~gad~n~~d---~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 198 (644)
++.|++.|++++..+ .+|.||||+|+..|+.+++++|++ .|++++..|..|.||||+|+..|+.+++++|++.+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVK-EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 356889999987655 456688999999999999999999 7999999999999999999999999999999999988
Q ss_pred ccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCC-CCCCCHHHHH--HHcCCHHHHHHHHHCCCCCCcccCCC
Q psy2733 199 LATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALD-LKKRTPLMAA--VGQGQTSVINYLMLRDVALDIQDIDG 275 (644)
Q Consensus 199 ~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d-~~G~TpL~~A--a~~g~~~iv~~Ll~~gadvn~~d~~G 275 (644)
++. .|..|+||||+|+..|+.+++++|++. |++++.++ ..|+||||+| +..|+.+++++|+++|++++.+|..|
T Consensus 80 ~n~--~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~ 156 (229)
T 2vge_A 80 VNS--PDSHGWTPLHCAASCNDTVICMALVQH-GAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGA 156 (229)
T ss_dssp TTC--CCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGE
T ss_pred CCC--CCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCc
Confidence 765 567899999999999999999999998 89999987 6999999999 99999999999999999999999999
Q ss_pred CcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCC--CCCCCCCCCCcchhhhcCC
Q psy2733 276 NGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAP--LSLENNNRQKPLDLILEDT 350 (644)
Q Consensus 276 ~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gad--i~~~n~~G~TpL~~A~~~~ 350 (644)
.|+++.++.... .++|++.|++ ++.+|.+|+||||+|+..+
T Consensus 157 ~~~l~~~~~~~~----------------------------------~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 157 VYALWDYSAEFG----------------------------------DELSFREGESVTVLRRDGPEETDWWWAALHG 199 (229)
T ss_dssp EEESSCBCCSST----------------------------------TBCCBCTTCEEEEEESSCTTCSSEEEEEETT
T ss_pred hHHHHHHhhccc----------------------------------cccCccccccccccccCCCcccHHHHHHHcC
Confidence 999986543322 2467788988 6788999999999999654
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.1e-26 Score=217.59 Aligned_cols=161 Identities=25% Similarity=0.307 Sum_probs=148.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHH
Q psy2733 135 QDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHV 214 (644)
Q Consensus 135 ~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~ 214 (644)
.|.+|.||||.|++.|+.++++.|++..+.+++..+..|.||||+|+..|+.+++++|++.++++.. .|..|+||||+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~ 81 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA--KDKGGLVPLHN 81 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc--cCCCCCCHHHH
Confidence 4667899999999999999999999977888888899999999999999999999999999988765 56789999999
Q ss_pred HHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCccccccc
Q psy2733 215 ACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPIT 294 (644)
Q Consensus 215 A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~ 294 (644)
|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|.. ++
T Consensus 82 A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~------- 152 (165)
T 3twr_A 82 ACSYGHYEVAELLVKH-GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GD------- 152 (165)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TC-------
T ss_pred HHHcCcHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CC-------
Confidence 9999999999999998 89999999999999999999999999999999999999999999999999765 66
Q ss_pred ccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCC
Q psy2733 295 REKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGA 330 (644)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Ga 330 (644)
.+++++|+++||
T Consensus 153 ------------------------~~i~~~L~~~gA 164 (165)
T 3twr_A 153 ------------------------TDIQDLLRGDAA 164 (165)
T ss_dssp ------------------------HHHHHHHHTC--
T ss_pred ------------------------hHHHHHHhhccc
Confidence 679999999886
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=7.7e-29 Score=246.04 Aligned_cols=199 Identities=12% Similarity=0.066 Sum_probs=168.8
Q ss_pred HHHHHHCCCCCcccC---CCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCCCCCCCCCCCCc
Q psy2733 16 LNILLARGACVYYPD---DAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETP 92 (644)
Q Consensus 16 vk~LL~~Ga~~n~~d---~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (644)
++.||++|++++..+ .+|.||||+|+..|+.+++++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~----------------------------------------- 39 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQ----------------------------------------- 39 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHH-----------------------------------------
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHH-----------------------------------------
Confidence 578999999876554 456788999999999999987
Q ss_pred ccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCC
Q psy2733 93 MLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSK 172 (644)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~ 172 (644)
|++.|+++|..|..|+||||+|+..|+.+++++|++ .|++++..|..
T Consensus 40 --------------------------------Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~n~~d~~ 86 (229)
T 2vge_A 40 --------------------------------AVKEMNDPSQPNEEGITALHNAICGANYSIVDFLIT-AGANVNSPDSH 86 (229)
T ss_dssp --------------------------------HHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTT
T ss_pred --------------------------------HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCC
Confidence 777888888899999999999999999999999999 79999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHH--HhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHH
Q psy2733 173 GFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVA--CFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAV 250 (644)
Q Consensus 173 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A--~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa 250 (644)
|.||||+|+..|+.+++++|++.++++.... +..|+||||+| +..|+.+++++|++. |++++.+|..|.||++.++
T Consensus 87 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~-~~~g~tpL~~A~a~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~l~~~~ 164 (229)
T 2vge_A 87 GWTPLHCAASCNDTVICMALVQHGAAIFATT-LSDGATAFEKCDPYREGYADCATYLADV-EQSMGLMNSGAVYALWDYS 164 (229)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC-SSTTCCTGGGCCTTSTTHHHHHHHHHHH-HHHTTTSGGGEEEESSCBC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCCCHHHHHHHHhcChHHHHHHHHHc-CCCcccccCCchHHHHHHh
Confidence 9999999999999999999999998876632 26899999999 999999999999998 7999999999999999665
Q ss_pred HcCCHHHHHHHHHCCCC--CCcccCCCCcHHHHHHHcCCcccccc
Q psy2733 251 GQGQTSVINYLMLRDVA--LDIQDIDGNGLLHFLFIKKNFYKTPI 293 (644)
Q Consensus 251 ~~g~~~iv~~Ll~~gad--vn~~d~~G~T~Lh~A~~~~~~~~~~~ 293 (644)
..+. .++|++.|++ ++.+|..|+||||+|+..|+.++++.
T Consensus 165 ~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 165 AEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp CSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred hccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 5543 3678889999 77889999999999999999777644
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=5.6e-26 Score=215.96 Aligned_cols=160 Identities=22% Similarity=0.292 Sum_probs=99.3
Q ss_pred cHHHHHHHcCCHHHHHHHHHC-CCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 2 TLLHILAYQGCVEELNILLAR-GACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~-Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
|+||.|+..|+.++|++|++. +.+++.+|..|+||||+|+..|+.+++++
T Consensus 7 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------------------- 57 (179)
T 3f6q_A 7 DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEM----------------------------- 57 (179)
T ss_dssp CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHH-----------------------------
T ss_pred HHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHH-----------------------------
Confidence 677777777777777777776 55677777777777777777777777765
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|++.|++++..|..|.||||+|+..|+.+++++|++
T Consensus 58 --------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (179)
T 3f6q_A 58 --------------------------------------------LIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQ 93 (179)
T ss_dssp --------------------------------------------HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------------------------------------HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 566666677677777777777777777777777777
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccC
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINAL 238 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~ 238 (644)
.|++++..|..|.||||+|+..|+.+++++|++.++++.. .+..|.|||++|+..++.+++++|++. |++++..
T Consensus 94 -~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~A~~~~~~~~~~~L~~~-g~~~~~~ 167 (179)
T 3f6q_A 94 -YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI--CNKYGEMPVDKAKAPLRELLRERAEKM-GQNLNRI 167 (179)
T ss_dssp -TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB--CCTTSCCGGGGSCHHHHHHHHHHHHHT-TCCCSCB
T ss_pred -cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch--hccCCCCcHHHHHHHHHHHHHHHHHHh-hcCcccC
Confidence 5666666655555555555555555555555544444322 233444444444444444444444444 3444433
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=8.3e-26 Score=209.01 Aligned_cols=149 Identities=24% Similarity=0.317 Sum_probs=111.6
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
||||.|+..|+.+++++|++.|++++ .|..|.||||+|+..|+.+++++
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~------------------------------ 52 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEV------------------------------ 52 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHH------------------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHH------------------------------
Confidence 78999999999999999999998876 58889999999999999988887
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcC
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 161 (644)
|++.|++++..|..|+||||+|+..|+.+++++|++
T Consensus 53 -------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~- 88 (153)
T 1awc_B 53 -------------------------------------------LLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLK- 88 (153)
T ss_dssp -------------------------------------------HHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHT-
T ss_pred -------------------------------------------HHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHH-
Confidence 677788888888889999999999999999999888
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHH
Q psy2733 162 PEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELL 227 (644)
Q Consensus 162 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~L 227 (644)
.|++++..|..|.||||+|+..|+.+++++|++.++++.. .+..|.||||+|+..|+.+++++|
T Consensus 89 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 89 HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT--QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 6877777766666666666666666666665555544433 334455555555555555555443
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=4.1e-28 Score=242.23 Aligned_cols=158 Identities=19% Similarity=0.269 Sum_probs=128.6
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcC
Q psy2733 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPK 204 (644)
Q Consensus 125 Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 204 (644)
|+++|++++.. ..|.||||+|+..|+.+++++|++ .+++++..|..|.||||+|+..|+.+++++|++.+++++. .
T Consensus 24 ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~--~ 99 (239)
T 1ycs_B 24 RIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIY-EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA--A 99 (239)
T ss_dssp --------------CHHHHHHHHHHTCHHHHHHHTS-TTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC--C
T ss_pred HhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--c
Confidence 66777777754 578999999999999999999999 7889999999999999999999999999999999888765 5
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCC-CHHHHH--HHcCCHHHHHHHHHCCCCCCcc---------c
Q psy2733 205 TSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKR-TPLMAA--VGQGQTSVINYLMLRDVALDIQ---------D 272 (644)
Q Consensus 205 d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~-TpL~~A--a~~g~~~iv~~Ll~~gadvn~~---------d 272 (644)
|..|+||||+|+..|+.+++++|+++ |++++.+|..|. ||||+| +..|+.+++++|+++|++++.. +
T Consensus 100 d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d 178 (239)
T 1ycs_B 100 DSDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWD 178 (239)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEec
Confidence 67899999999999999999999998 899999998877 999999 7889999999999999998876 4
Q ss_pred CCCCcHHHHHHHcCC
Q psy2733 273 IDGNGLLHFLFIKKN 287 (644)
Q Consensus 273 ~~G~T~Lh~A~~~~~ 287 (644)
..|.++++++...|.
T Consensus 179 ~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 179 YEPQNDDELPMKEGD 193 (239)
T ss_dssp BCCSSTTBCCBCSSC
T ss_pred cCCCCCCcccccCCC
Confidence 457777777766665
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=8.2e-27 Score=232.80 Aligned_cols=180 Identities=17% Similarity=0.194 Sum_probs=132.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHH
Q psy2733 137 NNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVAC 216 (644)
Q Consensus 137 ~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~ 216 (644)
..|.||||.|++.|+.++++.|++ .|++++.. ..|.||||+|+..|+.++++.|++.+++++. .|..|+||||+|+
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~-~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIA-HGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSL--PNDEGITALHNAV 78 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC--CCTTSCCHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhc-cCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHH
Confidence 469999999999999999999999 79999864 7889999999999999999999999987655 5688999999999
Q ss_pred hcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCC-cHHHHH--HHcCCcccccc
Q psy2733 217 FNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGN-GLLHFL--FIKKNFYKTPI 293 (644)
Q Consensus 217 ~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~-T~Lh~A--~~~~~~~~~~~ 293 (644)
..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..++
T Consensus 79 ~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~------ 151 (239)
T 1ycs_B 79 CAGHTEIVKFLVQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGY------ 151 (239)
T ss_dssp HHTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTC------
T ss_pred HcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhcc------
Confidence 99999999999998 899999999999999999999999999999999999999998887 999999 66666
Q ss_pred cccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCC---------CCCCCCcchhhhcCCcH
Q psy2733 294 TREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLE---------NNNRQKPLDLILEDTSL 352 (644)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~---------n~~G~TpL~~A~~~~~~ 352 (644)
.+++++|+++|++++.. +..+.+|++++.+.++.
T Consensus 152 -------------------------~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~ 194 (239)
T 1ycs_B 152 -------------------------TQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDC 194 (239)
T ss_dssp -------------------------CCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCE
T ss_pred -------------------------HHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCCE
Confidence 45999999999999887 55678888888866653
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1.5e-25 Score=207.30 Aligned_cols=144 Identities=22% Similarity=0.260 Sum_probs=135.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhc
Q psy2733 139 QDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFN 218 (644)
Q Consensus 139 G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~ 218 (644)
+.|+|+.|+..|+.+++++|++ .+.+++ .+..|.||||+|+..|+.+++++|++.++++.. .+..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMA-NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA--RTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH-HTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC--CCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHH-cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHHHc
Confidence 4589999999999999999999 677776 588899999999999999999999999887765 567899999999999
Q ss_pred CcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 219 DHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 219 g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 78 ~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 78 GHANIVEVLLKH-GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp TCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred ChHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 999999999998 89999999999999999999999999999999999999999999999999999999
No 76
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=5.7e-29 Score=264.50 Aligned_cols=172 Identities=10% Similarity=-0.015 Sum_probs=95.8
Q ss_pred cHHHHHHH-cCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH-hhccCCCccchhhhhhhhhcccccccc
Q psy2733 2 TLLHILAY-QGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQ 79 (644)
Q Consensus 2 TpLh~Aa~-~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (644)
+++++|+. .++.+++++|+++|++. +||||+|+..|+.++|++| ..++....
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~------------------- 120 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEI------------------- 120 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSS-------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHH-------------------
Confidence 35566665 46677777777766543 3777777777777777776 44431110
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCC---CCCCCCCCcHHHHHHHc
Q psy2733 80 RPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNV---NIQDNNQDTPMHDAVAK 149 (644)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~---n~~d~~G~TpL~~A~~~ 149 (644)
....+..+.||||+|+ +++|+++|+++ +..+.+ +||||+|+..
T Consensus 121 --------------------------~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~ 173 (376)
T 2aja_A 121 --------------------------VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAEN 173 (376)
T ss_dssp --------------------------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHT
T ss_pred --------------------------HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHC
Confidence 0002223334444442 44455555431 122222 5666666666
Q ss_pred CCHHHHHHHhcCCCCCccc--cCCCCCcHHHHHH-HcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHH
Q psy2733 150 GFEEIQLLLLSHPEVNLYL--ENSKGFNILNYAV-LRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVEL 226 (644)
Q Consensus 150 g~~~iv~~Ll~~~~~~~~~--~d~~g~tpL~~A~-~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~ 226 (644)
|+.+++++|++ .|++++. .+..|.||||+|+ ..|+.++|++|++.++ .|.||||+|+..|+.+++++
T Consensus 174 G~~eiv~~Ll~-~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga---------~~~taL~~Aa~~g~~evv~l 243 (376)
T 2aja_A 174 GHLHVLNRLCE-LAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV---------MLAYAEIHEFEYGEKYVNPF 243 (376)
T ss_dssp TCHHHHHHHHH-SCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH---------HHHHHHHCTTTTTTTTHHHH
T ss_pred CCHHHHHHHHH-cCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC---------ccchHHHHHHHCCCHHHHHH
Confidence 66666666666 4666555 5556666666666 6666666666665441 25566666666666666666
Q ss_pred HHHhcCCCccc
Q psy2733 227 LVEKYKVNINA 237 (644)
Q Consensus 227 Ll~~~g~~in~ 237 (644)
|++. |++++.
T Consensus 244 L~~~-ga~~~~ 253 (376)
T 2aja_A 244 IARH-VNRLKE 253 (376)
T ss_dssp HHHH-HHHHHH
T ss_pred HHhc-Cccccc
Confidence 6665 444433
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.7e-25 Score=205.88 Aligned_cols=150 Identities=26% Similarity=0.337 Sum_probs=118.0
Q ss_pred cHHHHHHHcCCHHHHHHHHHC-CCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 2 TLLHILAYQGCVEELNILLAR-GACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~-Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
||||+|+..|+.+++++|++. +.+++.+|..|+||||+ +..|+.+++++
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~----------------------------- 53 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALE----------------------------- 53 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHH-----------------------------
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHH-----------------------------
Confidence 789999999999999999988 44888889999999999 88899888876
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++..|..|.||||+|+..|+.+++++|++
T Consensus 54 --------------------------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 89 (156)
T 1bd8_A 54 --------------------------------------------LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVE 89 (156)
T ss_dssp --------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------------------------------------HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 777788888888889999999999999999999888
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHH
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVE 229 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~ 229 (644)
.|++++..|..|.||||+|+..|+.+++++|++. +++.. .|..|.||||+|+..|+.+++++|++
T Consensus 90 -~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~--~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 90 -HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR--RDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp -TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC--CCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred -cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC--cCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 6888887777777777777777777777777765 43332 44566666666666666666666664
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.1e-25 Score=206.66 Aligned_cols=144 Identities=22% Similarity=0.286 Sum_probs=136.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhc
Q psy2733 139 QDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFN 218 (644)
Q Consensus 139 G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~ 218 (644)
|.||||+|+..|+.+++++|++..+.+++..+..|.||||+ +..|+.++++.|++.++++.. .|..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV--QDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHc
Confidence 46899999999999999999996566899999999999999 999999999999999988765 568899999999999
Q ss_pred CcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 219 DHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 219 g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++. ++++.+|..|.||||+|+..++
T Consensus 79 ~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 79 GFLDTLKVLVEH-GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp TCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCC
T ss_pred CcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCc
Confidence 999999999998 899999999999999999999999999999999 9999999999999999999998
No 79
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.92 E-value=6.6e-25 Score=205.41 Aligned_cols=147 Identities=24% Similarity=0.304 Sum_probs=135.2
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHH
Q psy2733 169 ENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMA 248 (644)
Q Consensus 169 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~ 248 (644)
.+..|.|||+.|+..|+.++++.|++.+... ....+..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 81 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVN-CRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKDKGGLVPLHN 81 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCC-ccccccCCCCHHHHHHHcChHHHHHHHHhc-CCCCCccCCCCCCHHHH
Confidence 4667899999999999999999999865433 233457899999999999999999999998 89999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHc
Q psy2733 249 AVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKH 328 (644)
Q Consensus 249 Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~ 328 (644)
|+..|+.+++++|+++|++++.+|..|+||||+|+..++ .+++++|+++
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-------------------------------~~~v~~Ll~~ 130 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGK-------------------------------YEICKLLLQH 130 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-------------------------------HHHHHHHHHT
T ss_pred HHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC-------------------------------HHHHHHHHHc
Confidence 999999999999999999999999999999999999998 7799999999
Q ss_pred CCCCCCCCCCCCCcchhhhc
Q psy2733 329 GAPLSLENNNRQKPLDLILE 348 (644)
Q Consensus 329 Gadi~~~n~~G~TpL~~A~~ 348 (644)
|++++.+|..|+|||++|.+
T Consensus 131 ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 131 GADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp TCCTTCCCTTSCCTGGGSCT
T ss_pred CCCCcccCCCCCChhHhHhc
Confidence 99999999999999999984
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=1.8e-24 Score=200.87 Aligned_cols=145 Identities=19% Similarity=0.148 Sum_probs=95.9
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCC-HH
Q psy2733 168 LENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRT-PL 246 (644)
Q Consensus 168 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~T-pL 246 (644)
..+..|.||||+|+..|+.+++++|++.++++.. .+..|+||||+|+ .|+.+++++|++. |++++.+|..|.| ||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNA--PNSYGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRPV 82 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC--CCSSSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHHH
Confidence 3455667777777777777777777776665544 4467778888774 7788888888877 7888888888887 88
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHH
Q psy2733 247 MAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLV 326 (644)
Q Consensus 247 ~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll 326 (644)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..++ .+++++|+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~-------------------------------~~~v~~Ll 131 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGH-------------------------------RDVARYLR 131 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTC-------------------------------HHHHHHHS
T ss_pred HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCH-------------------------------HHHHHHHH
Confidence 88888888888888888888888888888888888888777 66888888
Q ss_pred HcCCCCCCCCCCCCCcchhhh
Q psy2733 327 KHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 327 ~~Gadi~~~n~~G~TpL~~A~ 347 (644)
++|++++.+|..|.||.+-+.
T Consensus 132 ~~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 132 AAAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp SCC------------------
T ss_pred HcCCCCCccCcCcCcccccCC
Confidence 888888888888888876443
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=4.7e-24 Score=193.19 Aligned_cols=120 Identities=18% Similarity=0.177 Sum_probs=83.6
Q ss_pred CCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCC-C
Q psy2733 164 VNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK-K 242 (644)
Q Consensus 164 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~-G 242 (644)
.+++..+..|.||||+|+..|+.+++++|++.++++.. .+..|+||||+|+. |+.+++++|++. |++++.+|.. |
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~~g 78 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNA--LNRFGRRPIQVMMM-GSAQVAELLLLH-GAEPNCADPATL 78 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCTTTTTSTT-SCHHHHHHHHHH-TCCSSCCBTTTT
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC--cCCCCCCHHHHHHc-CCHHHHHHHHHC-CCCCCCcCCCCC
Confidence 45555666666666666666666666666666555443 34567777777777 777777777776 6777777777 7
Q ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 243 RTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 243 ~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 123 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGH 123 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 777777777777777777777777777777777777777777776
No 82
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=1.3e-26 Score=246.40 Aligned_cols=275 Identities=12% Similarity=0.070 Sum_probs=177.8
Q ss_pred HHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHh-cCCHHHHHHH-hhccCCCccchhhhhhhhhccccccccCCCCCC
Q psy2733 8 AYQGCVEELNILLARGACVYYPDDAGDTALHYAAF-GNKPDAIQIN-SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLP 85 (644)
Q Consensus 8 a~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~-~g~~eiv~lL-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (644)
...+..+.+..+++.+.+++. ..+.+++++|.. .++.+++++| .++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~--~~~ll~~~~a~~~~~~~~~~~~l~~~g~----------------------------- 90 (376)
T 2aja_A 42 MTLSYKEAIHIFLPGTKNMEQ--VRQLLCLYYAHYNRNAKQLWSDAHKKGI----------------------------- 90 (376)
T ss_dssp HHSCHHHHHHHCCCCSSHHHH--HHHHHHHHHHHTTTTCTTHHHHHHHHTC-----------------------------
T ss_pred hhccHHHHHHHHhcCCCCHHH--HHHHHHHHHHHhcCCCHHHHHHHHHcCC-----------------------------
Confidence 335667888888877665533 245789999887 5778888886 4432
Q ss_pred CCCCCCcccccccccccccCCCCCCcccchhhHHHH-------HHHHHhCCCCC---CCCCCCCCcHHHHHHHcCCHHHH
Q psy2733 86 KVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ-------DFVLLRNGCNV---NIQDNNQDTPMHDAVAKGFEEIQ 155 (644)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~-------v~~Ll~~gad~---n~~d~~G~TpL~~A~~~g~~~iv 155 (644)
.+.||||+|+ ++.|++.|+.. +..+..|.||||+|+..|+.+++
T Consensus 91 --------------------------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv 144 (376)
T 2aja_A 91 --------------------------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVL 144 (376)
T ss_dssp --------------------------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHH
T ss_pred --------------------------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHH
Confidence 2347888885 78888888732 23344677888888888888888
Q ss_pred HHHhcCCCCC---ccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHH-hcCcHHHHHHHHHhc
Q psy2733 156 LLLLSHPEVN---LYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVAC-FNDHIEIVELLVEKY 231 (644)
Q Consensus 156 ~~Ll~~~~~~---~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~-~~g~~~~v~~Ll~~~ 231 (644)
++|++ .|++ .+..+.+ .||||+|+..|+.++|++|++.++++.....|..|+||||+|+ ..|+.++|++|++.
T Consensus 145 ~~Ll~-~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~- 221 (376)
T 2aja_A 145 NRLCE-LAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC- 221 (376)
T ss_dssp HHHHH-SCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS-
T ss_pred HHHHh-CCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC-
Confidence 88888 5654 2332333 7888888888888888888888876432112356788888888 88888888888875
Q ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCc-hhHHhhhhcCC
Q psy2733 232 KVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSV-PIYEEYLSVGG 310 (644)
Q Consensus 232 g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 310 (644)
|. .|.||||+|+..|+.+++++|+++|++++.++ ++++.|+..|+.+++........ .+...+....
T Consensus 222 ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~- 289 (376)
T 2aja_A 222 PV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRN- 289 (376)
T ss_dssp HH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHC-
T ss_pred CC-------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcc-
Confidence 32 27788888888888888888888888876655 36667777777664421100000 0011111111
Q ss_pred CCCccchHHHHHHHHHHcCC-----CCCCCCCCCCCcchhhhcC--CcHHHHHHH
Q psy2733 311 PSNEHGILLAVFLFLVKHGA-----PLSLENNNRQKPLDLILED--TSLLNEIME 358 (644)
Q Consensus 311 ~~~~~~~~~~iv~~Ll~~Ga-----di~~~n~~G~TpL~~A~~~--~~~~~~l~~ 358 (644)
.....+.+++|++.++ +.....+.+.|||++|+.. .++++.|+.
T Consensus 290 ----~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~ 340 (376)
T 2aja_A 290 ----DEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS 340 (376)
T ss_dssp ----CGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTT
T ss_pred ----hhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHc
Confidence 2234677888876431 1122234567899999954 345666654
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=5.9e-24 Score=192.57 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=127.6
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCC-
Q psy2733 129 GCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSD- 207 (644)
Q Consensus 129 gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~- 207 (644)
+++++..|..|.||||+|+..|+.+++++|++ .+++++.++..|.||||+|+. |+.+++++|++.++++.. .|..
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~--~~~~~ 77 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLE-AGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC--ADPAT 77 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC--CBTTT
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHH-cCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC--cCCCC
Confidence 57899999999999999999999999999999 799999999999999999999 999999999999988766 5567
Q ss_pred CchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q psy2733 208 GFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVA 267 (644)
Q Consensus 208 g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gad 267 (644)
|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|+|
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHT-CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999998 899999999999999999999999999999999986
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=5.4e-24 Score=197.61 Aligned_cols=145 Identities=19% Similarity=0.132 Sum_probs=118.5
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCch-H
Q psy2733 133 NIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFT-P 211 (644)
Q Consensus 133 n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T-~ 211 (644)
+..+..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+ .|+.+++++|++.++++.. .+..|+| |
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~--~d~~g~ttp 81 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLE-AGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC--ADPATLTRP 81 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHT-TTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC--CCTTTCCCH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC--cCCCCCcHH
Confidence 4456789999999999999999999999 69999999999999999995 9999999999999987765 5678999 9
Q ss_pred HHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHH
Q psy2733 212 LHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFL 282 (644)
Q Consensus 212 Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A 282 (644)
||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||.+-+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999998 899999999999999999999999999999999999999999999998744
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=9.2e-24 Score=202.40 Aligned_cols=160 Identities=10% Similarity=0.092 Sum_probs=132.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcH----HHHHHHHHhcCCCcccCCCCCCCHHHH
Q psy2733 173 GFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHI----EIVELLVEKYKVNINALDLKKRTPLMA 248 (644)
Q Consensus 173 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~----~~v~~Ll~~~g~~in~~d~~G~TpL~~ 248 (644)
++++|+.|+..|+.+.++.++..+.... .+..|+||||+|+..|+. +++++|++. |+++|.+|..|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~---~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDK---ESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCH---HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccc---cccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHHHH
Confidence 4678999999999999988888764321 125699999999999864 589999998 89999999999999999
Q ss_pred HHHcCC------HHHHHHHHHCCCCCCcccCCCC-cHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHH
Q psy2733 249 AVGQGQ------TSVINYLMLRDVALDIQDIDGN-GLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAV 321 (644)
Q Consensus 249 Aa~~g~------~~iv~~Ll~~gadvn~~d~~G~-T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 321 (644)
|+..|+ .+++++|+++|+++|.+|..|+ ||||+|+..+... ....++
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~--------------------------~~~~~i 135 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDE--------------------------NEMIPL 135 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCH--------------------------HHHHHH
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCCh--------------------------hhHHHH
Confidence 999987 6889999999999999999999 9999999854311 223679
Q ss_pred HHHHHH-cCCCCCCCCCCCCCcchhhhcCC--cHHHHHHHHhhh
Q psy2733 322 FLFLVK-HGAPLSLENNNRQKPLDLILEDT--SLLNEIMEHARE 362 (644)
Q Consensus 322 v~~Ll~-~Gadi~~~n~~G~TpL~~A~~~~--~~~~~l~~~~~~ 362 (644)
+++|++ +|++++.+|..|+||||+|++.+ .+++.|..+...
T Consensus 136 v~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 136 YKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999 99999999999999999999654 345666655543
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=9.5e-23 Score=184.56 Aligned_cols=122 Identities=30% Similarity=0.352 Sum_probs=112.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------------------- 65 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEV----------------------------- 65 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH-----------------------------
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH-----------------------------
Confidence 489999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++..|..|.||||+|+..|+.+++++|++
T Consensus 66 --------------------------------------------Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 101 (136)
T 2jab_A 66 --------------------------------------------LLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLK 101 (136)
T ss_dssp --------------------------------------------HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------------------------------------------HHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 778888888899999999999999999999999999
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALN 196 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 196 (644)
.|++++..|..|.||||+|+..|+.+++++|++.|
T Consensus 102 -~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 102 -HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp -TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred -cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 79999999999999999999999999999998764
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=4.5e-24 Score=204.53 Aligned_cols=162 Identities=17% Similarity=0.122 Sum_probs=141.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCCccccC-CCCCcHHHHHHHcCCH----HHHHHHHHhcCCccCCcCCCCCchHHH
Q psy2733 139 QDTPMHDAVAKGFEEIQLLLLSHPEVNLYLEN-SKGFNILNYAVLRGNM----KVTEKILALNRNLATVPKTSDGFTPLH 213 (644)
Q Consensus 139 G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpL~~A~~~g~~----~~v~~Ll~~~~~~~~~~~d~~g~T~Lh 213 (644)
++++|+.|++.|+.+.++.++. .+ ++..+ ..|+||||+|+..|+. +++++|++.|++++. .|..|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~-~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~--~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFE-KG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS--RTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHH-HS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC--CCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHh-cC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC--CCCCCCcHHH
Confidence 5689999999999999999988 44 34455 7799999999999975 589999999998876 5689999999
Q ss_pred HHHhcCc------HHHHHHHHHhcCCCcccCCCCCC-CHHHHHHHcC-----CHHHHHHHHH-CCCCCCcccCCCCcHHH
Q psy2733 214 VACFNDH------IEIVELLVEKYKVNINALDLKKR-TPLMAAVGQG-----QTSVINYLML-RDVALDIQDIDGNGLLH 280 (644)
Q Consensus 214 ~A~~~g~------~~~v~~Ll~~~g~~in~~d~~G~-TpL~~Aa~~g-----~~~iv~~Ll~-~gadvn~~d~~G~T~Lh 280 (644)
+|+..++ .+++++|+++ |+++|.+|..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|+||||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEK-GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence 9999886 6889999998 899999999999 9999999955 4579999999 99999999999999999
Q ss_pred HHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCC
Q psy2733 281 FLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENN 337 (644)
Q Consensus 281 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~ 337 (644)
+|+..++ .+++++|.+...+.+++++
T Consensus 160 ~A~~~~~-------------------------------~~~v~~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 160 FVKRCQK-------------------------------PIALKMMEDYIKKYNLKEN 185 (186)
T ss_dssp HHHTTTC-------------------------------HHHHHHHHHHHHHHTCCC-
T ss_pred HHHHcCC-------------------------------HHHHHHHHHHHHHHhcccC
Confidence 9999988 6789999887766665553
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=5.4e-22 Score=175.89 Aligned_cols=113 Identities=31% Similarity=0.490 Sum_probs=83.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHH
Q psy2733 172 KGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVG 251 (644)
Q Consensus 172 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~ 251 (644)
+|.||||+|+..|+.+++++|++.+.++.. .+..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA--KDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCC--cCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCcHHHHHHH
Confidence 366777777777777777777776665543 445677777777777777777777776 67777777777777777777
Q ss_pred cCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 252 QGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 252 ~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
.|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 113 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 113 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCc
Confidence 777777777777777777777777777777777777
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=4.8e-22 Score=176.21 Aligned_cols=124 Identities=32% Similarity=0.479 Sum_probs=115.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~----------------------------- 53 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL----------------------------- 53 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHH-----------------------------
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHH-----------------------------
Confidence 699999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|++.|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 54 --------------------------------------------Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 89 (126)
T 1n0r_A 54 --------------------------------------------LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89 (126)
T ss_dssp --------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------------------------------------HHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHH
Confidence 777888888899999999999999999999999999
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRN 198 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 198 (644)
.|++++.++..|.|||++|+..|+.+++++|++.|++
T Consensus 90 -~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 90 -AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred -cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 7999999999999999999999999999999998864
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=7.6e-22 Score=178.59 Aligned_cols=112 Identities=26% Similarity=0.284 Sum_probs=58.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHc
Q psy2733 173 GFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQ 252 (644)
Q Consensus 173 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~ 252 (644)
+.||||+|+..|+.++++.|++.++++.. .|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNA--KDEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHc
Confidence 34444444444444444444444444332 234455555555555555555555554 455555555555555555555
Q ss_pred CCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCC
Q psy2733 253 GQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKN 287 (644)
Q Consensus 253 g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~ 287 (644)
|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~ 125 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN 125 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCC
Confidence 55555555555555555555555555555555555
No 91
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=1.2e-21 Score=173.83 Aligned_cols=117 Identities=17% Similarity=0.183 Sum_probs=106.1
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHH
Q psy2733 205 TSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFI 284 (644)
Q Consensus 205 d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~ 284 (644)
+..|.||||+|+..|+.+++++|++. |.+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 36788999999999999999999998 79999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhhcCCcHHH
Q psy2733 285 KKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTSLLN 354 (644)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~~~~~~~~ 354 (644)
.++ .+++++|+++|++++.+|.+|+|||++|. ..++.+
T Consensus 83 ~~~-------------------------------~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~-~~~~~~ 120 (123)
T 3aaa_C 83 EGH-------------------------------VSCVKLLLSKGADKTVKGPDGLTAFEATD-NQAIKA 120 (123)
T ss_dssp HTC-------------------------------HHHHHHHHHTTCCTTCCCTTSCCHHHHCC-CHHHHH
T ss_pred cCC-------------------------------HHHHHHHHHcCCCCCCcCCCCCCHHHHhC-CHHHHH
Confidence 998 77999999999999999999999999996 444433
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=1.8e-21 Score=176.18 Aligned_cols=112 Identities=23% Similarity=0.296 Sum_probs=106.6
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHH
Q psy2733 204 KTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLF 283 (644)
Q Consensus 204 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~ 283 (644)
.|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 468899999999999999999999998 8999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcchhhh
Q psy2733 284 IKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL~~A~ 347 (644)
..++ .+++++|+++|++++.+|..|+|||++|+
T Consensus 85 ~~~~-------------------------------~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 117 (137)
T 3c5r_A 85 KNGH-------------------------------VDIVKLLLSYGASRNAVNIFGLRPVDYTD 117 (137)
T ss_dssp HTTC-------------------------------HHHHHHHHHTTCCTTCCCTTSCCGGGGCC
T ss_pred HcCC-------------------------------HHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 9988 77999999999999999999999999998
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=6.5e-22 Score=188.71 Aligned_cols=136 Identities=19% Similarity=0.185 Sum_probs=112.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+|+..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~----------------------------- 94 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRL----------------------------- 94 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHH-----------------------------
T ss_pred CCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHH-----------------------------
Confidence 478888888888888888888 88888888888888888888888888876
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHh
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQD-NNQDTPMHDAVAKGFEEIQLLLL 159 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d-~~G~TpL~~A~~~g~~~iv~~Ll 159 (644)
|+++|+++|.+| ..|+||||+|+..|+.+++++|+
T Consensus 95 --------------------------------------------Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 130 (183)
T 3deo_A 95 --------------------------------------------LAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV 130 (183)
T ss_dssp --------------------------------------------HHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred --------------------------------------------HHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHH
Confidence 677777887777 78888888888888888888888
Q ss_pred cCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHh
Q psy2733 160 SHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEK 230 (644)
Q Consensus 160 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ 230 (644)
+ .|++++.+|..|.||||+|+..++. ..+.++|++|+..|..+++++|.++
T Consensus 131 ~-~ga~~~~~d~~g~tpl~~A~~~~~~-------------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 131 E-LGADIEVEDERGLTALELAREILKT-------------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp H-HTCCTTCCCTTSCCHHHHHHHHHHT-------------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred H-cCCCCcCCCCCCCCHHHHHHHhccC-------------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 8 6888888888888888888864321 3456888888888888888888754
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=9.3e-22 Score=196.82 Aligned_cols=106 Identities=23% Similarity=0.231 Sum_probs=63.7
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccCC
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRP 81 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (644)
||||+|+..|+.++|++|++ |++++.+|..|+||||+|+..|+.++|++
T Consensus 47 t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~------------------------------ 95 (244)
T 3ui2_A 47 TPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRL------------------------------ 95 (244)
T ss_dssp HHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHH------------------------------
T ss_pred CHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHH------------------------------
Confidence 56666666666666666666 66666666666666666666666666554
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 82 SNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQD-NNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d-~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|+++|.++ ..|+||||+|+..|+.+++++|++
T Consensus 96 -------------------------------------------Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 132 (244)
T 3ui2_A 96 -------------------------------------------LAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 132 (244)
T ss_dssp -------------------------------------------HHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -------------------------------------------HHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 455555555555 456666666666666666666666
Q ss_pred CCCCCccccCCCCCcHHHHHHH
Q psy2733 161 HPEVNLYLENSKGFNILNYAVL 182 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~ 182 (644)
.|++++.+|..|.||||+|+.
T Consensus 133 -~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 133 -LGADIEVEDERGLTALELARE 153 (244)
T ss_dssp -TTCCTTCCCTTCCCHHHHHHH
T ss_pred -CCCCCCCCCCCCCcHHHHHHH
Confidence 466666666666666666653
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=9.6e-23 Score=194.49 Aligned_cols=163 Identities=20% Similarity=0.142 Sum_probs=132.7
Q ss_pred HHHcCCHHHHHHHHHCCCCCcc-----------cCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhcccc
Q psy2733 7 LAYQGCVEELNILLARGACVYY-----------PDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTT 75 (644)
Q Consensus 7 Aa~~G~~e~vk~LL~~Ga~~n~-----------~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~ 75 (644)
|++.|..+.+++|++.+..... .+..|+||||+|+..|+.+++++
T Consensus 7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~------------------------ 62 (183)
T 3deo_A 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQ------------------------ 62 (183)
T ss_dssp EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHH------------------------
T ss_pred HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHH------------------------
Confidence 4455666666777754332211 25578899999999999999887
Q ss_pred ccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy2733 76 EKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQ 155 (644)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv 155 (644)
|++ |+++|..|..|+||||+|+..|+.+++
T Consensus 63 -------------------------------------------------Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v 92 (183)
T 3deo_A 63 -------------------------------------------------LLE-DRDVDAVDENGRTALLFVAGLGSDKCV 92 (183)
T ss_dssp -------------------------------------------------HTT-TSCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred -------------------------------------------------HHh-cCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 556 778888889999999999999999999
Q ss_pred HHHhcCCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCC
Q psy2733 156 LLLLSHPEVNLYLEN-SKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVN 234 (644)
Q Consensus 156 ~~Ll~~~~~~~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~ 234 (644)
++|++ .|++++..+ ..|.||||+|+..|+.+++++|++.++++.. .|..|+||||+|+..++.
T Consensus 93 ~~Ll~-~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpl~~A~~~~~~------------- 156 (183)
T 3deo_A 93 RLLAE-AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV--EDERGLTALELAREILKT------------- 156 (183)
T ss_dssp HHHHH-TTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTC--CCTTSCCHHHHHHHHHHT-------------
T ss_pred HHHHH-cCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcC--CCCCCCCHHHHHHHhccC-------------
Confidence 99999 799998888 8899999999999999999999999888765 568899999999864332
Q ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHC
Q psy2733 235 INALDLKKRTPLMAAVGQGQTSVINYLMLR 264 (644)
Q Consensus 235 in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~ 264 (644)
..+.++|++|+..|+.+++++|.++
T Consensus 157 -----~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 -----TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp -----CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred -----cccccHHHHHHHcCHHHHHHHHHHh
Confidence 3467899999999999999999764
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=6.4e-22 Score=179.16 Aligned_cols=131 Identities=24% Similarity=0.267 Sum_probs=81.5
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCC
Q psy2733 129 GCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDG 208 (644)
Q Consensus 129 gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g 208 (644)
|+|+ .+|.+|+||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.++++.. .|..|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g 76 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQ-NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT--TGYQN 76 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCGGG
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC--cCCCC
Confidence 4555 566677777777777777777777777 5666666666666666666666666666666666655443 34556
Q ss_pred chHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC
Q psy2733 209 FTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLR 264 (644)
Q Consensus 209 ~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~ 264 (644)
+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..+..+++++|.+.
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 77 DSPLHDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred CCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 6666666666666666666665 566666666666666666666666665555443
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=2.4e-21 Score=199.99 Aligned_cols=138 Identities=17% Similarity=0.096 Sum_probs=111.6
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcc------cCCCCCcHHHHHHhc---CCHHHHHHHhhccCCCccchhhhhhhhhc
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYY------PDDAGDTALHYAAFG---NKPDAIQINSHVSGANRSRKHIYKERHRT 72 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~------~d~~G~TpLh~Aa~~---g~~eiv~lL~~~a~~~~~~~~~~~~~~~~ 72 (644)
++||.|+..|+++.++.|++.|++++. .|..|+||||+|+.. |+.+++++
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~--------------------- 211 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDF--------------------- 211 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHH---------------------
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHH---------------------
Confidence 468999999999999999999998887 688899999999986 77788776
Q ss_pred cccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy2733 73 VTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE 152 (644)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~ 152 (644)
|+++|+++|.+|..|+||||+|+..|+.
T Consensus 212 ----------------------------------------------------Ll~~gadvn~~d~~G~TpLh~A~~~g~~ 239 (301)
T 2b0o_E 212 ----------------------------------------------------IIQNGGHLDAKAADGNTALHYAALYNQP 239 (301)
T ss_dssp ----------------------------------------------------HHHHSSCTTCCCTTCCCHHHHHHHTTCH
T ss_pred ----------------------------------------------------HHhcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 7777888888888899999999999999
Q ss_pred HHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcH
Q psy2733 153 EIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHI 221 (644)
Q Consensus 153 ~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~ 221 (644)
+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++.+++ .|.||||+|+..|+.
T Consensus 240 ~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 240 DCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG--------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHH-TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--------TTSSCCC--------
T ss_pred HHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--------CCCChhHHHHhcCCc
Confidence 99999998 7889998998999999999999999999999888753 467888888887763
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.84 E-value=1.1e-21 Score=193.07 Aligned_cols=137 Identities=21% Similarity=0.227 Sum_probs=97.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q psy2733 170 NSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAA 249 (644)
Q Consensus 170 d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~A 249 (644)
+..|.||||+|+..|+.++++.|++.++++.. .|..|+||||+|+..|+.+++++|++..|++++.+|..|+||||+|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNG--LDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccc--cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 45577777777777777777777777766544 4567888888888888888888888766788888888888888888
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcC
Q psy2733 250 VGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHG 329 (644)
Q Consensus 250 a~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~G 329 (644)
+..|+.+++++|+++|++++.+|..|.||||+|+..+. .++++.|+++|
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~-------------------------------~~~l~~l~~~~ 196 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC-------------------------------ASLLKKKQGTD 196 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHH-------------------------------HHHHC------
T ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhH-------------------------------HHHHHHHhccc
Confidence 88888888888888888888888888888888887665 67888888888
Q ss_pred CCCCCCCCCC
Q psy2733 330 APLSLENNNR 339 (644)
Q Consensus 330 adi~~~n~~G 339 (644)
++.+.+|.+|
T Consensus 197 ~~~~~~~~~~ 206 (222)
T 3ehr_A 197 AVRTLSNAED 206 (222)
T ss_dssp ----------
T ss_pred hhhhccchhh
Confidence 8887776655
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=4.2e-20 Score=188.54 Aligned_cols=135 Identities=17% Similarity=0.119 Sum_probs=114.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCccC----CcCCCCCchHHHHHHhc---CcHHHHHHHHHhcCCCcccCCCCCCCH
Q psy2733 173 GFNILNYAVLRGNMKVTEKILALNRNLAT----VPKTSDGFTPLHVACFN---DHIEIVELLVEKYKVNINALDLKKRTP 245 (644)
Q Consensus 173 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~----~~~d~~g~T~Lh~A~~~---g~~~~v~~Ll~~~g~~in~~d~~G~Tp 245 (644)
..++|+.|+..|+.+.++.+++.+.+... ...+..|+||||+|+.. |+.+++++|++. |+++|.+|..|+||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCCH
Confidence 34567777777777777777777766432 22357799999999998 899999999998 89999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHH
Q psy2733 246 LMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFL 325 (644)
Q Consensus 246 L~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~L 325 (644)
||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..++ .+++++|
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~-------------------------------~~~v~~L 257 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKH-------------------------------EHCEELL 257 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-------------------------------HHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCC-------------------------------HHHHHHH
Confidence 999999999999999999999999999999999999999988 7799999
Q ss_pred HHcCCCCCCCCCCCCCcchhhh
Q psy2733 326 VKHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 326 l~~Gadi~~~n~~G~TpL~~A~ 347 (644)
+++|++ .+++|+++
T Consensus 258 l~~ga~--------~~~~~~~v 271 (278)
T 1dcq_A 258 TQALSG--------RFNSHVHV 271 (278)
T ss_dssp HHHHTT--------CCCSSCCC
T ss_pred HHcCCC--------CCCcceee
Confidence 999985 45666665
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=9.4e-21 Score=195.59 Aligned_cols=141 Identities=14% Similarity=0.083 Sum_probs=123.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCccCC----cCCCCCchHHHHHHhc---CcHHHHHHHHHhcCCCcccCCCCCCC
Q psy2733 172 KGFNILNYAVLRGNMKVTEKILALNRNLATV----PKTSDGFTPLHVACFN---DHIEIVELLVEKYKVNINALDLKKRT 244 (644)
Q Consensus 172 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~----~~d~~g~T~Lh~A~~~---g~~~~v~~Ll~~~g~~in~~d~~G~T 244 (644)
.+.++|+.|+..|+.+.++.|++.++++... ..+..|+||||+|+.. |+.+++++|++. |+++|.+|..|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCC
Confidence 3457899999999999999999998886542 1357899999999997 899999999998 8999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHH
Q psy2733 245 PLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLF 324 (644)
Q Consensus 245 pL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 324 (644)
|||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..++ .+++++
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~-------------------------------~~iv~~ 277 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH-------------------------------KECEEL 277 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTC-------------------------------HHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-------------------------------HHHHHH
Confidence 9999999999999999999999999999999999999999998 779999
Q ss_pred HHHcCCCCCCCCCCCCCcchhhhcCC
Q psy2733 325 LVKHGAPLSLENNNRQKPLDLILEDT 350 (644)
Q Consensus 325 Ll~~Gadi~~~n~~G~TpL~~A~~~~ 350 (644)
|+++|++ .|.||||+|++.+
T Consensus 278 Ll~~ga~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 278 LEQAQAG------TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHH------TTSSCCC------
T ss_pred HHHhcCC------CCCChhHHHHhcC
Confidence 9999987 5899999998543
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=5.3e-21 Score=169.73 Aligned_cols=110 Identities=24% Similarity=0.323 Sum_probs=97.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------------------- 58 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEF----------------------------- 58 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHH-----------------------------
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHH-----------------------------
Confidence 378999999999999999999999999999999999999999999998887
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 59 --------------------------------------------Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 94 (123)
T 3aaa_C 59 --------------------------------------------LLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLS 94 (123)
T ss_dssp --------------------------------------------HHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------------------------------------------HHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 778888888889899999999999999999999999
Q ss_pred CCCCCccccCCCCCcHHHHHHHcC
Q psy2733 161 HPEVNLYLENSKGFNILNYAVLRG 184 (644)
Q Consensus 161 ~~~~~~~~~d~~g~tpL~~A~~~g 184 (644)
.|++++.+|..|.||||+|...+
T Consensus 95 -~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 95 -KGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp -TTCCTTCCCTTSCCHHHHCCCHH
T ss_pred -cCCCCCCcCCCCCCHHHHhCCHH
Confidence 68999999999999999884433
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.82 E-value=2.3e-20 Score=186.65 Aligned_cols=143 Identities=22% Similarity=0.135 Sum_probs=127.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHH
Q psy2733 137 NNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVAC 216 (644)
Q Consensus 137 ~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~ 216 (644)
..|.||||+|+..|+.++++.|++ +++++..|..|.||||+|+..|+.+++++|++.+++++... +..|+||||+|+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~~g~t~L~~A~ 119 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRD-MRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC-SSSCCCHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCC-CCCCCCHHHHHH
Confidence 478999999999999999999998 78999999999999999999999999999999998876632 267999999999
Q ss_pred hcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCccccccccc
Q psy2733 217 FNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITRE 296 (644)
Q Consensus 217 ~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~ 296 (644)
..|+.+++++|++. |++++.+|..|.||||+|+..+ ....|.||||+|+..++
T Consensus 120 ~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~-----------------~~~~~~~~l~~a~~~g~--------- 172 (244)
T 3ui2_A 120 GYVRPEVVEALVEL-GADIEVEDERGLTALELAREIL-----------------KTTPKGNPMQFGRRIGL--------- 172 (244)
T ss_dssp HTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHH-----------------TTCCCSSHHHHHHHHHH---------
T ss_pred HcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHHH-----------------hccCCCCHHHHHHHcCh---------
Confidence 99999999999998 8999999999999999998632 23578999999999887
Q ss_pred CCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCC
Q psy2733 297 KSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAP 331 (644)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gad 331 (644)
.+++++|++++.+
T Consensus 173 ----------------------~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 173 ----------------------EKVINVLEGQVFE 185 (244)
T ss_dssp ----------------------HHHHHHHHHHHEE
T ss_pred ----------------------HHHHHHHHHhccc
Confidence 6799999987654
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=9e-21 Score=186.39 Aligned_cols=138 Identities=21% Similarity=0.277 Sum_probs=114.7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHh-cCCccCCcCCCCCchHHH
Q psy2733 135 QDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILAL-NRNLATVPKTSDGFTPLH 213 (644)
Q Consensus 135 ~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~d~~g~T~Lh 213 (644)
.+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++. ++++.. .|..|+||||
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~--~d~~g~tpL~ 145 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLD-NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ--QNKLGDTALH 145 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC--CCTTSCCHHH
T ss_pred cccccccccccccccCcHHHHHHHHh-CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc--cCCCCCCHHH
Confidence 46689999999999999999999999 7999999999999999999999999999999998 777655 5689999999
Q ss_pred HHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCC
Q psy2733 214 VACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGN 276 (644)
Q Consensus 214 ~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~ 276 (644)
+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.++++.|++.|++.+.++..|+
T Consensus 146 ~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 99999999999999999 899999999999999999999999999999999999988776653
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=2.9e-19 Score=197.61 Aligned_cols=136 Identities=15% Similarity=0.101 Sum_probs=114.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCccCC----cCCCCCchHHHHHHh---cCcHHHHHHHHHhcCCCcccCCCCCCCHH
Q psy2733 174 FNILNYAVLRGNMKVTEKILALNRNLATV----PKTSDGFTPLHVACF---NDHIEIVELLVEKYKVNINALDLKKRTPL 246 (644)
Q Consensus 174 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~----~~d~~g~T~Lh~A~~---~g~~~~v~~Ll~~~g~~in~~d~~G~TpL 246 (644)
.+.||.|+..|+.+.++.|++.|++++.. ..+..|+||||+|+. .|+.+++++|++. |+++|.+|..|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCCcHH
Confidence 36799999999999999999998876543 125789999999965 8999999999998 899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHH
Q psy2733 247 MAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLV 326 (644)
Q Consensus 247 ~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll 326 (644)
|+|+..|+.+++++|+++|++++.+|.+|+||||+|+..++ .+++++|+
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~-------------------------------~~~~~~Ll 260 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH-------------------------------KECEELLE 260 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTC-------------------------------HHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-------------------------------HHHHHHHH
Confidence 99999999999999999999999999999999999999998 77999999
Q ss_pred HcCCCCCCCCCCCCCcchhhh
Q psy2733 327 KHGAPLSLENNNRQKPLDLIL 347 (644)
Q Consensus 327 ~~Gadi~~~n~~G~TpL~~A~ 347 (644)
++||+++.. |+|++.
T Consensus 261 ~~ga~~~~~------~~h~~~ 275 (497)
T 3lvq_E 261 QAQAGTFAF------PLHVDY 275 (497)
T ss_dssp HTCC-----------------
T ss_pred HhCCCCCCC------cceeec
Confidence 999999874 555544
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=3e-19 Score=150.14 Aligned_cols=93 Identities=35% Similarity=0.539 Sum_probs=82.6
Q ss_pred CCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcC
Q psy2733 207 DGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKK 286 (644)
Q Consensus 207 ~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~ 286 (644)
+|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 478999999999999999999987 7899999999999999999999999999999999999999999999999999888
Q ss_pred CcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCC
Q psy2733 287 NFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAP 331 (644)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gad 331 (644)
+ .+++++|+++||+
T Consensus 80 ~-------------------------------~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 H-------------------------------LEVVKLLLEAGAY 93 (93)
T ss_dssp C-------------------------------HHHHHHHHHTTCC
T ss_pred C-------------------------------HHHHHHHHHcCCC
Confidence 8 6799999999875
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.80 E-value=2.4e-19 Score=189.69 Aligned_cols=142 Identities=25% Similarity=0.238 Sum_probs=100.6
Q ss_pred cHHHHHHHc-CCHHHHHHHHHCCCCCcccC--CCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccc
Q psy2733 2 TLLHILAYQ-GCVEELNILLARGACVYYPD--DAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKV 78 (644)
Q Consensus 2 TpLh~Aa~~-G~~e~vk~LL~~Ga~~n~~d--~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~ 78 (644)
|+||+|+.. |+++++++|++.|++++..| ..|.||||+|+..|+.++|++
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~--------------------------- 253 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEF--------------------------- 253 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHH---------------------------
T ss_pred cHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHH---------------------------
Confidence 578888888 88888888888888888877 778888888888888888876
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy2733 79 QRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLL 158 (644)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~L 158 (644)
|+++|+++|..|..|+||||+|+..|+.+++++|
T Consensus 254 ----------------------------------------------LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~L 287 (368)
T 3jue_A 254 ----------------------------------------------LLQNGANVNQADSAGRGPLHHATILGHTGLACLF 287 (368)
T ss_dssp ----------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ----------------------------------------------HHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHH
Confidence 6777778888888888888888888888888888
Q ss_pred hcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccC-CcCCCCCchHHHHHHh
Q psy2733 159 LSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLAT-VPKTSDGFTPLHVACF 217 (644)
Q Consensus 159 l~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~-~~~d~~g~T~Lh~A~~ 217 (644)
++ .|++++..|..|.||||+|+..|+.+++++|+..+..... ...+..+.|+++.+..
T Consensus 288 L~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 288 LK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred HH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 88 6888888888888888888888888888888876643221 1122445566655543
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.79 E-value=2.8e-19 Score=197.75 Aligned_cols=134 Identities=18% Similarity=0.160 Sum_probs=114.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCccc------CCCCCcHHHHHHh---cCCHHHHHHHhhccCCCccchhhhhhhhhc
Q psy2733 2 TLLHILAYQGCVEELNILLARGACVYYP------DDAGDTALHYAAF---GNKPDAIQINSHVSGANRSRKHIYKERHRT 72 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~------d~~G~TpLh~Aa~---~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~ 72 (644)
+.||.|+..|+++.|+.|++.|+++|.+ |..|+||||+|+. .|+.++|++
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~--------------------- 192 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDF--------------------- 192 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHH---------------------
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHH---------------------
Confidence 4699999999999999999999999987 8899999999966 888999887
Q ss_pred cccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy2733 73 VTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE 152 (644)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~ 152 (644)
|+++|+++|.+|..|+||||+|+..|+.
T Consensus 193 ----------------------------------------------------Ll~~ga~vn~~d~~g~TpLh~A~~~g~~ 220 (497)
T 3lvq_E 193 ----------------------------------------------------IIQNGGHLDAKAADGNTALHYAALYNQP 220 (497)
T ss_dssp ----------------------------------------------------HHHHSCCTTCCCSSSCCHHHHHTTTTCH
T ss_pred ----------------------------------------------------HHHcCCCCCccCCCCCcHHHHHHHcCCH
Confidence 7888899999999999999999999999
Q ss_pred HHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHh
Q psy2733 153 EIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACF 217 (644)
Q Consensus 153 ~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~ 217 (644)
+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++.|++... +|+|.+..
T Consensus 221 ~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~--------~~~h~~~~ 276 (497)
T 3lvq_E 221 DCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA--------FPLHVDYS 276 (497)
T ss_dssp HHHHHHHH-TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------------
T ss_pred HHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC--------Ccceeecc
Confidence 99999999 7999999999999999999999999999999999987533 68887654
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=2.6e-19 Score=189.46 Aligned_cols=149 Identities=21% Similarity=0.219 Sum_probs=114.8
Q ss_pred ccCCCCCcHHHHHHHc-CCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHH
Q psy2733 168 LENSKGFNILNYAVLR-GNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPL 246 (644)
Q Consensus 168 ~~d~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL 246 (644)
..+..+.|+||+|+.. |+.++++.|++.+++++....+..|.||||+|+..|+.+++++|+++ |+++|.+|..|+|||
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpL 272 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPL 272 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHH
Confidence 3344567899999999 99999999999998887644347899999999999999999999998 899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHHHcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHH
Q psy2733 247 MAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLV 326 (644)
Q Consensus 247 ~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll 326 (644)
|+|+..|+.+++++|+++|++++.+|.+|.||||+|+..++ .+++++|+
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~-------------------------------~~iv~lLl 321 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN-------------------------------ADIVTLLR 321 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-------------------------------HHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCC-------------------------------HHHHHHHH
Confidence 99999999999999999999999999999999999999988 67999998
Q ss_pred HcC---CCCCCCCCCCCCcchhhhc
Q psy2733 327 KHG---APLSLENNNRQKPLDLILE 348 (644)
Q Consensus 327 ~~G---adi~~~n~~G~TpL~~A~~ 348 (644)
.+| ++....+..+.|+++++..
T Consensus 322 ~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 322 LAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHHC---------------------
T ss_pred HcCCCcccccccCCCCCCHHHHHHH
Confidence 876 4445667788888888763
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=1.4e-19 Score=158.49 Aligned_cols=108 Identities=26% Similarity=0.354 Sum_probs=87.9
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHH
Q psy2733 204 KTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLF 283 (644)
Q Consensus 204 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~ 283 (644)
+|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 457788888888888888888888887 7888888888888888888888888888888888888888888888888888
Q ss_pred HcCCcccccccccCCchhHHhhhhcCCCCCccchHHHHHHHHHHcCCCCCCCCCCCCCcc
Q psy2733 284 IKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPL 343 (644)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~Gadi~~~n~~G~TpL 343 (644)
..++ .+++++|+++|+++|.++..|.||-
T Consensus 84 ~~~~-------------------------------~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGH-------------------------------HEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTC-------------------------------HHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCC-------------------------------HHHHHHHHHcCCCCCcCCccccccc
Confidence 8777 6688888888888888888888773
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=1.2e-18 Score=146.45 Aligned_cols=90 Identities=38% Similarity=0.544 Sum_probs=81.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHhhccCCCccchhhhhhhhhccccccccC
Q psy2733 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQR 80 (644)
Q Consensus 1 ~TpLh~Aa~~G~~e~vk~LL~~Ga~~n~~d~~G~TpLh~Aa~~g~~eiv~lL~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 80 (644)
+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~----------------------------- 53 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL----------------------------- 53 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH-----------------------------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHH-----------------------------
Confidence 689999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhc
Q psy2733 81 PSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLS 160 (644)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 160 (644)
|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 54 --------------------------------------------Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~ 89 (93)
T 1n0q_A 54 --------------------------------------------LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89 (93)
T ss_dssp --------------------------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------------------------------------HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 778888888889899999999999999999999988
Q ss_pred CCCC
Q psy2733 161 HPEV 164 (644)
Q Consensus 161 ~~~~ 164 (644)
.|+
T Consensus 90 -~ga 92 (93)
T 1n0q_A 90 -AGA 92 (93)
T ss_dssp -TTC
T ss_pred -cCC
Confidence 554
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.78 E-value=1.7e-18 Score=176.62 Aligned_cols=124 Identities=19% Similarity=0.142 Sum_probs=110.7
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCC------cccCCCCCcHHHHHHhc---CCHHHHHHHhhccCCCccchhhhhhhhhc
Q psy2733 2 TLLHILAYQGCVEELNILLARGACV------YYPDDAGDTALHYAAFG---NKPDAIQINSHVSGANRSRKHIYKERHRT 72 (644)
Q Consensus 2 TpLh~Aa~~G~~e~vk~LL~~Ga~~------n~~d~~G~TpLh~Aa~~---g~~eiv~lL~~~a~~~~~~~~~~~~~~~~ 72 (644)
++|+.|+..|+++.++.+++.|+++ +..|..|+||||+|+.. |+.+++++
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~--------------------- 190 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDF--------------------- 190 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHH---------------------
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHH---------------------
Confidence 4789999999999999999999984 44588899999999998 78888876
Q ss_pred cccccccCCCCCCCCCCCCcccccccccccccCCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy2733 73 VTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE 152 (644)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~v~~Ll~~gad~n~~d~~G~TpL~~A~~~g~~ 152 (644)
|+++|+++|.+|..|+||||+|+..|+.
T Consensus 191 ----------------------------------------------------Ll~~ga~in~~d~~g~TpLh~A~~~g~~ 218 (278)
T 1dcq_A 191 ----------------------------------------------------LVQNSGNLDKQTGKGSTALHYCCLTDNA 218 (278)
T ss_dssp ----------------------------------------------------HHHHCSCTTCCCTTCCCHHHHHHHTTCH
T ss_pred ----------------------------------------------------HHHCCCCccccCCCCCCHHHHHHHcCCH
Confidence 7778888888999999999999999999
Q ss_pred HHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCc
Q psy2733 153 EIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNL 199 (644)
Q Consensus 153 ~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 199 (644)
+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++.+++.
T Consensus 219 ~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 219 ECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999 79999999999999999999999999999999988754
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.74 E-value=2.4e-18 Score=150.51 Aligned_cols=109 Identities=26% Similarity=0.378 Sum_probs=86.6
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCccCCcCCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHH
Q psy2733 168 LENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLM 247 (644)
Q Consensus 168 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~ 247 (644)
.+|..|.||||+|+..|+.++++.|++.++++.. .|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA--RSKDGNTPLHLAAKNGHAEIVKLLLAK-GADVNARSKDGNTPEH 80 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC--CCSSSCCTTHHHHTTTCHHHHHHHTTT-TCCTTCCCTTCCCTTH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCCHHH
Confidence 3566777777777777777777777777666544 456788888888888888888888887 7888888889999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCcccCCCCcHH
Q psy2733 248 AAVGQGQTSVINYLMLRDVALDIQDIDGNGLL 279 (644)
Q Consensus 248 ~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~L 279 (644)
+|+..|+.+++++|+++|+++|.++..|.+|-
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999888888763
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.64 E-value=7.5e-16 Score=133.67 Aligned_cols=83 Identities=23% Similarity=0.208 Sum_probs=75.8
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCcHHHHHH
Q psy2733 204 KTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLF 283 (644)
Q Consensus 204 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~~g~~in~~d~~G~TpL~~Aa~~g~~~iv~~Ll~~gadvn~~d~~G~T~Lh~A~ 283 (644)
.+.+|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 357899999999999999999999988 7999999999999999999999999999999999999999999999999999
Q ss_pred HcCC
Q psy2733 284 IKKN 287 (644)
Q Consensus 284 ~~~~ 287 (644)
..++
T Consensus 99 ~~~~ 102 (110)
T 2zgd_A 99 DNGN 102 (110)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 9988
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.64 E-value=7.2e-16 Score=133.79 Aligned_cols=67 Identities=28% Similarity=0.470 Sum_probs=34.5
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy2733 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKI 192 (644)
Q Consensus 125 Ll~~gad~n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~L 192 (644)
|++.|+++|.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|
T Consensus 43 Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 43 LMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLE-AGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 344444444455555555555555555555555555 3555555555555555555555555555443
No 115
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=99.31 E-value=1.2e-12 Score=105.73 Aligned_cols=64 Identities=30% Similarity=0.726 Sum_probs=55.5
Q ss_pred HHHHHhhhhhhhcCcccccccCCcCeEEe-cCcc-cchhhhhcCCCCccccccccceEEEEEeeecCCC
Q psy2733 466 NYLESKISEIEEMNTCTICMERCRNTIFL-CGHG-TCDVCAKTLKFCHMCRKLIEQRINISRAFVSPDQ 532 (644)
Q Consensus 466 ~~l~~~~~~~~~~~~C~iC~~~~~~~~~~-CgH~-~C~~C~~~~~~Cp~Cr~~i~~~~~~~~~~~~~~~ 532 (644)
+.+++++++++++..|+||++...+++++ |||. +|..|+..+..||+||.+|..++ +.|++++.
T Consensus 6 ~~l~~~~~~l~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~---~i~~p~~~ 71 (79)
T 2yho_A 6 RVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQ---HVYLPTHT 71 (79)
T ss_dssp CTHHHHHHHHHHHTBCTTTSSSBCCEEEETTCBCCBCHHHHTTCSBCTTTCCBCCEEE---ECBCTTCC
T ss_pred HHHHHHHHcCCCCCEeEEeCcccCcEEEECCCCHHHHHHHHHhcCcCCCCCchhhCeE---EEEeCcch
Confidence 45677777888889999999999999999 9996 89999999999999999999888 55665543
No 116
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.20 E-value=4.9e-12 Score=100.98 Aligned_cols=56 Identities=36% Similarity=0.821 Sum_probs=48.8
Q ss_pred HHhhhhhhhcCcccccccCCcCeEEe-cCcc-cchhhhhcCCCCccccccccceEEEE
Q psy2733 469 ESKISEIEEMNTCTICMERCRNTIFL-CGHG-TCDVCAKTLKFCHMCRKLIEQRINIS 524 (644)
Q Consensus 469 ~~~~~~~~~~~~C~iC~~~~~~~~~~-CgH~-~C~~C~~~~~~Cp~Cr~~i~~~~~~~ 524 (644)
+++.+.++++..|.||++...+++++ |||. +|..|+..+..||+||.+|..++++|
T Consensus 15 ~~~~~~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~ 72 (74)
T 4ic3_A 15 EEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIL 72 (74)
T ss_dssp HHHHHHHHHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTCSBCTTTCCBCSEEEECB
T ss_pred HHHHhcCccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcCccCCCcCcCccCcEEEe
Confidence 34455666778899999999999999 9996 99999999999999999999888444
No 117
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=1.5e-11 Score=98.44 Aligned_cols=52 Identities=37% Similarity=0.828 Sum_probs=45.7
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcc-cchhhhhcCCCCccccccccceEEEE
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHG-TCDVCAKTLKFCHMCRKLIEQRINIS 524 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~-~C~~C~~~~~~Cp~Cr~~i~~~~~~~ 524 (644)
++++++..|+||++...+++++ |||. +|..|+..+..||+||.+|..++++|
T Consensus 20 ~~~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~ 73 (75)
T 2ecg_A 20 RRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIF 73 (75)
T ss_dssp HHHHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHHHHCSBCTTTCCBCCCCCBCC
T ss_pred HcCCCCCCCCcCCCCCCCEEEecCCCHHHHHHHhhCCCCCccCCceecCcEEEe
Confidence 3445556799999999999999 9997 99999999999999999999988554
No 118
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=1.9e-11 Score=95.53 Aligned_cols=49 Identities=31% Similarity=0.805 Sum_probs=44.6
Q ss_pred hcCcccccccCCcCeEEe-cCcc-cchhhhhcCCCCccccccccceEEEEE
Q psy2733 477 EMNTCTICMERCRNTIFL-CGHG-TCDVCAKTLKFCHMCRKLIEQRINISR 525 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~~~-CgH~-~C~~C~~~~~~Cp~Cr~~i~~~~~~~~ 525 (644)
+...|.||++.+++++|+ |||. +|..|+..+..||+||.+|..++++|+
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~CR~~i~~~~~i~~ 64 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALSG 64 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHHHCSSCTTTCCCCCCEECCCS
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHhcCCCCCCCCcchhceEEeec
Confidence 457899999999999999 9995 899999999999999999999986653
No 119
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.03 E-value=6e-11 Score=106.29 Aligned_cols=97 Identities=26% Similarity=0.618 Sum_probs=71.9
Q ss_pred cccccccccccce------EEecCCCccccchhhHHHh----hhhhccccceeeeeecCCCccCCCcccchhHHHHHHHH
Q psy2733 399 VECAVCSELGVAN------VLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYL 468 (644)
Q Consensus 399 ~~C~iC~d~~~~~------v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l 468 (644)
..|.||++..... +...||||. .|.+|..+. ..||.||+.+...-...
T Consensus 8 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~--------------------- 65 (133)
T 4ap4_A 8 VSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHKRYHP--------------------- 65 (133)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTCCE-EEHHHHHHHHTTCSBCTTTCCBCTTTCEEE---------------------
T ss_pred CCCcccChhhhCccccccCeEecCCCCh-hhHHHHHHHHHhCCCCCCCCCcCccccccc---------------------
Confidence 4699999864222 255599996 799999775 38999999886432110
Q ss_pred HHhhhhhhhcCcccccccCCcCe-------EEe-cCcccchhhhhc----CCCCccccccccce
Q psy2733 469 ESKISEIEEMNTCTICMERCRNT-------IFL-CGHGTCDVCAKT----LKFCHMCRKLIEQR 520 (644)
Q Consensus 469 ~~~~~~~~~~~~C~iC~~~~~~~-------~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~ 520 (644)
+...++...|.||++...+. +.. |||.+|..|... .+.||+||.++...
T Consensus 66 ---l~i~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 126 (133)
T 4ap4_A 66 ---IYIGSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 126 (133)
T ss_dssp ---CBCSSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred ---cccCCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChh
Confidence 11124456799999987764 777 999999999984 47999999999864
No 120
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.98 E-value=1.6e-10 Score=88.93 Aligned_cols=50 Identities=34% Similarity=0.652 Sum_probs=42.0
Q ss_pred hhcCcccccccCCcCeEE--e-cCcc-cchhhhhcCC----CCccccccccceEEEEE
Q psy2733 476 EEMNTCTICMERCRNTIF--L-CGHG-TCDVCAKTLK----FCHMCRKLIEQRINISR 525 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~--~-CgH~-~C~~C~~~~~----~Cp~Cr~~i~~~~~~~~ 525 (644)
+....|.||++.+++.++ . |||. +|..|+..+. +||+||++|...+++|.
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~ 62 (63)
T 2vje_B 5 NLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFI 62 (63)
T ss_dssp GGGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEEEEEE
T ss_pred CcCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceEEEec
Confidence 344679999999998755 3 9995 8999999775 89999999999986664
No 121
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.89 E-value=3.9e-10 Score=87.01 Aligned_cols=50 Identities=34% Similarity=0.656 Sum_probs=42.1
Q ss_pred hhcCcccccccCCcCeEEe---cCcc-cchhhhhcCC----CCccccccccceEEEEE
Q psy2733 476 EEMNTCTICMERCRNTIFL---CGHG-TCDVCAKTLK----FCHMCRKLIEQRINISR 525 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~---CgH~-~C~~C~~~~~----~Cp~Cr~~i~~~~~~~~ 525 (644)
+++..|.||++++++++++ |||. +|..|+..+. .||+||++|...+++|.
T Consensus 6 ~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~ 63 (64)
T 2vje_A 6 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYF 63 (64)
T ss_dssp GGGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEEEEEC
T ss_pred CCcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceEeeec
Confidence 3456899999999999974 9996 7999999664 59999999998886653
No 122
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.79 E-value=2.5e-09 Score=110.55 Aligned_cols=57 Identities=33% Similarity=0.871 Sum_probs=50.5
Q ss_pred HHHhhhhhhhcCcccccccCCcCeEEe-cCcc-cchhhhhcCCCCccccccccceEEEE
Q psy2733 468 LESKISEIEEMNTCTICMERCRNTIFL-CGHG-TCDVCAKTLKFCHMCRKLIEQRINIS 524 (644)
Q Consensus 468 l~~~~~~~~~~~~C~iC~~~~~~~~~~-CgH~-~C~~C~~~~~~Cp~Cr~~i~~~~~~~ 524 (644)
++++++.++++..|+||++...+++++ |||. +|..|+..+..||+||.+|..++++|
T Consensus 285 ~~~~~~~l~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~~~CP~CR~~i~~~~~i~ 343 (345)
T 3t6p_A 285 LEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTF 343 (345)
T ss_dssp HHHHHHHHHTTCBCTTTSSSBCCEEEETTCCEEECTTTGGGCSBCTTTCCBCCEEEECC
T ss_pred HHHHHHhCcCCCCCCccCCcCCceEEcCCCChhHhHHHHhcCCcCCCCCCCccCeEEee
Confidence 344566777788999999999999999 9996 99999999999999999999998555
No 123
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=1.6e-08 Score=79.45 Aligned_cols=49 Identities=24% Similarity=0.744 Sum_probs=41.5
Q ss_pred hhhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC----CCCccccccccceE
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL----KFCHMCRKLIEQRI 521 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~----~~Cp~Cr~~i~~~~ 521 (644)
+..+.+...|.||++...+ +.+ |||.+|..|.... ..||+||.++....
T Consensus 9 ~~~~~~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (70)
T 2ecn_A 9 VKQLTDEEECCICMDGRAD-LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 62 (70)
T ss_dssp CCCCCCCCCCSSSCCSCCS-EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCC
T ss_pred hhcCCCCCCCeeCCcCccC-cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCC
Confidence 3445667889999999999 777 9999999999854 57999999999765
No 124
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.50 E-value=8.7e-08 Score=86.15 Aligned_cols=46 Identities=33% Similarity=0.718 Sum_probs=39.9
Q ss_pred hhhcCcccccccCCcCeEEe-cCcccchhhhhc----CCCCccccccccce
Q psy2733 475 IEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQR 520 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~ 520 (644)
++++..|+||++...+++.+ |||.||..|+.. -..||+||.+|...
T Consensus 50 ~~~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 50 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSK 100 (138)
T ss_dssp HHHHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCCE
T ss_pred ccccCCCcccCcccCCceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCCC
Confidence 45567899999999999999 999999999884 35799999999754
No 125
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.48 E-value=4.9e-08 Score=76.02 Aligned_cols=48 Identities=29% Similarity=0.809 Sum_probs=43.6
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeecC
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTTD 447 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~~ 447 (644)
..|.||++.. ..+++.||||.+.|..|...+++||+||..|...+++-
T Consensus 16 ~~C~IC~~~~-~~~v~~pCgH~~~C~~C~~~~~~CP~CR~~i~~~~~i~ 63 (68)
T 2ea5_A 16 KDCVVCQNGT-VNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALS 63 (68)
T ss_dssp SCCSSSSSSC-CCCEETTTTBCCSCTTHHHHCSSCTTTCCCCCCEECCC
T ss_pred CCCCCcCcCC-CCEEEECCCChhhhHHHHhcCCCCCCCCcchhceEEee
Confidence 5699999998 67788899999999999999999999999999988764
No 126
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=3.8e-08 Score=78.02 Aligned_cols=48 Identities=23% Similarity=0.755 Sum_probs=41.2
Q ss_pred hhhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC-------CCCccccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-------KFCHMCRKLIEQ 519 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-------~~Cp~Cr~~i~~ 519 (644)
.+++++...|+||++...+.+.+ |||.||..|.... ..||+||.++..
T Consensus 14 ~~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 14 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred HHhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 34566778999999999999999 9999999999853 279999999875
No 127
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=9.5e-08 Score=75.25 Aligned_cols=44 Identities=34% Similarity=0.850 Sum_probs=38.8
Q ss_pred hhcCcccccccCCcCeEEe-cCcccchhhhhcC----CCCccccccccc
Q psy2733 476 EEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL----KFCHMCRKLIEQ 519 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~----~~Cp~Cr~~i~~ 519 (644)
.+...|.||++...+.+.+ |||.||..|+... ..||+||.++..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCH
Confidence 4456899999999999999 9999999999864 579999999885
No 128
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.39 E-value=1.3e-07 Score=72.48 Aligned_cols=47 Identities=26% Similarity=0.600 Sum_probs=39.7
Q ss_pred cccccccccccceEE--ecCCCccccchhhHHHhh----hhhccccceeeeeec
Q psy2733 399 VECAVCSELGVANVL--LKPCNHAVACEECSSRMK----KCIMCKTFIEMRVTT 446 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~--~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~~~~~ 446 (644)
..|.||++.. .... +.||||.+.|.+|..+++ +||+||+.|++.+++
T Consensus 8 ~~C~IC~~~~-~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i 60 (63)
T 2vje_B 8 KPCSLCEKRP-RDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKV 60 (63)
T ss_dssp SBCTTTSSSB-SCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEEEE
T ss_pred CCCcccCCcC-CCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceEEE
Confidence 4699999986 4333 449999999999999998 999999999987754
No 129
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.37 E-value=1e-07 Score=71.17 Aligned_cols=44 Identities=20% Similarity=0.507 Sum_probs=38.6
Q ss_pred hhcCcccccccCCcCeEEe-cCcccchhhhhcC-CCCccccccccc
Q psy2733 476 EEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-KFCHMCRKLIEQ 519 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-~~Cp~Cr~~i~~ 519 (644)
++...|.||++...+.+.+ |||.+|..|.... ..||+||+++..
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPL 49 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSSC
T ss_pred ccCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEeec
Confidence 4557899999999999999 9999999999864 589999998873
No 130
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.35 E-value=1.1e-07 Score=76.58 Aligned_cols=47 Identities=30% Similarity=0.697 Sum_probs=40.7
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcccchhhhhc-----------CCCCccccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT-----------LKFCHMCRKLIEQ 519 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~-----------~~~Cp~Cr~~i~~ 519 (644)
+.++++..|+||++...+.+.+ |||.+|..|... ...||+||.++..
T Consensus 7 ~~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 7 GNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred hhcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 4556778899999999999999 999999999984 3579999999874
No 131
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.35 E-value=2.3e-07 Score=81.76 Aligned_cols=48 Identities=29% Similarity=0.610 Sum_probs=41.1
Q ss_pred hhhhhhcCcccccccCCcCeEEe-cCcccchhhhhc-----CCCCccccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT-----LKFCHMCRKLIEQ 519 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~-----~~~Cp~Cr~~i~~ 519 (644)
...+++...|+||++...+.+.+ |||.||..|... ...||+||.++..
T Consensus 46 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 46 LSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred HHhCccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 34556678899999999999999 999999999973 3489999999975
No 132
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.34 E-value=6.2e-08 Score=77.55 Aligned_cols=51 Identities=27% Similarity=0.678 Sum_probs=40.0
Q ss_pred hhhhhcCcccccccCC--cCeEEe---cCcccchhhhhcC-----CCCccccccccceEEE
Q psy2733 473 SEIEEMNTCTICMERC--RNTIFL---CGHGTCDVCAKTL-----KFCHMCRKLIEQRINI 523 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~--~~~~~~---CgH~~C~~C~~~~-----~~Cp~Cr~~i~~~~~~ 523 (644)
+.++++..|+||++.. .++++. |||.+|..|...+ ..||.||+++....-+
T Consensus 6 ~~~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~~ 66 (78)
T 1e4u_A 6 DAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAV 66 (78)
T ss_dssp CCCCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSSC
T ss_pred cccccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCchh
Confidence 3456778999999977 344554 9999999999865 3799999999986533
No 133
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.33 E-value=1.6e-07 Score=74.18 Aligned_cols=49 Identities=24% Similarity=0.555 Sum_probs=41.1
Q ss_pred hhhhhhcCcccccccCCcCeEEe--cCcccchhhhhc----CCCCccccccccce
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKT----LKFCHMCRKLIEQR 520 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~----~~~Cp~Cr~~i~~~ 520 (644)
++++++...|+||++...+.+.+ |||.||..|... ...||+||.++...
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (72)
T 2djb_A 9 LSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQT 63 (72)
T ss_dssp CCCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSS
T ss_pred HhhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCcc
Confidence 45567778999999999987764 999999999974 46899999999864
No 134
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.33 E-value=2.2e-07 Score=71.38 Aligned_cols=47 Identities=32% Similarity=0.656 Sum_probs=40.4
Q ss_pred cccccccccccceEEec--CCCccccchhhHHHhhh----hhccccceeeeeec
Q psy2733 399 VECAVCSELGVANVLLK--PCNHAVACEECSSRMKK----CIMCKTFIEMRVTT 446 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~--PC~h~~~C~~C~~~~~~----Cp~Cr~~i~~~~~~ 446 (644)
.+|.||++.. ....+. ||||.+.|.+|..++.. ||+||+.|+..+++
T Consensus 9 ~~C~IC~~~~-~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i 61 (64)
T 2vje_A 9 EPCVICQGRP-KNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLT 61 (64)
T ss_dssp SCCTTTSSSC-SCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEEEE
T ss_pred CCCCcCCCCC-CCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceEee
Confidence 4699999988 555665 99999999999999875 99999999987753
No 135
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.32 E-value=3.2e-07 Score=71.45 Aligned_cols=45 Identities=31% Similarity=0.695 Sum_probs=38.2
Q ss_pred hcCcccccccCCcCe-EEe-cCcccchhhhhc----CCCCccccccccceE
Q psy2733 477 EMNTCTICMERCRNT-IFL-CGHGTCDVCAKT----LKFCHMCRKLIEQRI 521 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~-~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~~ 521 (644)
++..|+||++...+. +.+ |||.+|..|... -..||+||.++...+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 54 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESVV 54 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCEE
T ss_pred CCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhhh
Confidence 446799999999984 667 999999999974 468999999999765
No 136
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.29 E-value=1.9e-07 Score=78.87 Aligned_cols=48 Identities=29% Similarity=0.672 Sum_probs=41.2
Q ss_pred hhhhhhcCcccccccCCcCeEE-e-cCcccchhhhhcC-----CCCccccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIF-L-CGHGTCDVCAKTL-----KFCHMCRKLIEQ 519 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~-~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~~ 519 (644)
...++++..|+||++...+.+. + |||.||..|.... ..||+||.++..
T Consensus 16 ~~~l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 16 VESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHHHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cccCCCCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 4456677889999999999999 7 9999999999842 589999999864
No 137
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.28 E-value=2.9e-07 Score=75.06 Aligned_cols=47 Identities=30% Similarity=0.631 Sum_probs=40.8
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcccchhhhhc----------CCCCccccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT----------LKFCHMCRKLIEQ 519 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----------~~~Cp~Cr~~i~~ 519 (644)
+++++...|+||++...+.+.+ |||.+|..|... ...||+||.++..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 14 EMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred HhCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 4456678899999999999999 999999999874 5689999999875
No 138
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.27 E-value=1.9e-07 Score=72.33 Aligned_cols=47 Identities=23% Similarity=0.554 Sum_probs=40.1
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcccchhhhhc-----CCCCccccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT-----LKFCHMCRKLIEQ 519 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~-----~~~Cp~Cr~~i~~ 519 (644)
..+.++..|+||++...+.+.+ |||.+|..|... ...||+||.++..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 10 KTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CSCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred hcCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 3455667899999999999999 999999999983 3579999999875
No 139
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.27 E-value=4.4e-07 Score=78.32 Aligned_cols=54 Identities=24% Similarity=0.657 Sum_probs=44.0
Q ss_pred HHHHHhhhhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC-------CCCccccccccc
Q psy2733 466 NYLESKISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-------KFCHMCRKLIEQ 519 (644)
Q Consensus 466 ~~l~~~~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-------~~Cp~Cr~~i~~ 519 (644)
+.++.....+.+...|+||++...+.+.+ |||.+|..|.... ..||+||.++..
T Consensus 9 ~~~~~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 9 EEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHHHHHHHHHHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred HHHHHHHHhccCCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 34444555667778999999999999999 9999999998742 379999998874
No 140
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.27 E-value=1.8e-07 Score=73.11 Aligned_cols=45 Identities=31% Similarity=0.733 Sum_probs=37.8
Q ss_pred hhhcCcccccccCCcCe-------EEe-cCcccchhhhhcC----CCCccccccccc
Q psy2733 475 IEEMNTCTICMERCRNT-------IFL-CGHGTCDVCAKTL----KFCHMCRKLIEQ 519 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~-------~~~-CgH~~C~~C~~~~----~~Cp~Cr~~i~~ 519 (644)
..+...|.||++...+. +.+ |||.||..|.... ..||+||.++..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCc
Confidence 45667899999988775 777 9999999999853 589999999875
No 141
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=2.2e-07 Score=76.42 Aligned_cols=47 Identities=34% Similarity=0.812 Sum_probs=39.8
Q ss_pred hhhhhcCcccccccCCcC----eEEe-cCcccchhhhhcC-------CCCccccccccc
Q psy2733 473 SEIEEMNTCTICMERCRN----TIFL-CGHGTCDVCAKTL-------KFCHMCRKLIEQ 519 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~----~~~~-CgH~~C~~C~~~~-------~~Cp~Cr~~i~~ 519 (644)
+.+++...|+||++...+ .+.+ |||.+|..|.... ..||+||.++..
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 10 DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CCCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred hhccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 345666889999999998 8888 9999999999843 589999998764
No 142
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.26 E-value=3.9e-07 Score=73.18 Aligned_cols=47 Identities=32% Similarity=0.777 Sum_probs=42.4
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeecC
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTTD 447 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~~ 447 (644)
.|.||++.. ..+.+.||||.+.|..|...++.||+||+.|...+++-
T Consensus 20 ~C~IC~~~~-~~~v~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~ 66 (79)
T 2yho_A 20 LCMVCCEEE-INSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVY 66 (79)
T ss_dssp BCTTTSSSB-CCEEEETTCBCCBCHHHHTTCSBCTTTCCBCCEEEECB
T ss_pred EeEEeCccc-CcEEEECCCCHHHHHHHHHhcCcCCCCCchhhCeEEEE
Confidence 599999998 66777799999999999999999999999999988754
No 143
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=3e-07 Score=74.95 Aligned_cols=47 Identities=32% Similarity=0.749 Sum_probs=41.0
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcccchhhhhc----------CCCCccccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT----------LKFCHMCRKLIEQ 519 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----------~~~Cp~Cr~~i~~ 519 (644)
.++++...|+||++...+.+.+ |||.+|..|... ...||+||.++..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 4556678999999999999999 999999999874 5689999999885
No 144
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.24 E-value=3.8e-07 Score=73.77 Aligned_cols=45 Identities=27% Similarity=0.538 Sum_probs=39.0
Q ss_pred hhhcCcccccccCCcCeEEe-cCcccchhhhhcC----CCCccccccccc
Q psy2733 475 IEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL----KFCHMCRKLIEQ 519 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~----~~Cp~Cr~~i~~ 519 (644)
.++...|+||++...+.+.+ |||.||..|.... ..||+||.++..
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (81)
T 2csy_A 12 EEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTGG 61 (81)
T ss_dssp CCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCCS
T ss_pred CCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCCCcCCCcCccccc
Confidence 34557899999999999999 9999999999753 579999999974
No 145
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.22 E-value=4.2e-07 Score=67.45 Aligned_cols=42 Identities=26% Similarity=0.616 Sum_probs=35.3
Q ss_pred hcCcccccccCCcC----eEEe-cCcccchhhhhcC----CCCcccccccc
Q psy2733 477 EMNTCTICMERCRN----TIFL-CGHGTCDVCAKTL----KFCHMCRKLIE 518 (644)
Q Consensus 477 ~~~~C~iC~~~~~~----~~~~-CgH~~C~~C~~~~----~~Cp~Cr~~i~ 518 (644)
++..|.||++...+ ++.+ |||.+|..|.... ..||+||.++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 34679999998765 7777 9999999999853 68999999875
No 146
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.21 E-value=2.4e-07 Score=71.54 Aligned_cols=43 Identities=28% Similarity=0.720 Sum_probs=34.0
Q ss_pred cCccccccc-CCcCe----EEe-cCcccchhhhhcC-----CCCccccccccce
Q psy2733 478 MNTCTICME-RCRNT----IFL-CGHGTCDVCAKTL-----KFCHMCRKLIEQR 520 (644)
Q Consensus 478 ~~~C~iC~~-~~~~~----~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~~~ 520 (644)
+..|+||++ ...+. +.+ |||.+|..|.... ..||+||+++...
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 56 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKS 56 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccc
Confidence 467999999 43333 456 9999999998854 5799999999863
No 147
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.21 E-value=2.9e-07 Score=70.68 Aligned_cols=43 Identities=35% Similarity=0.858 Sum_probs=36.1
Q ss_pred cCcccccccCCcCe-------EEe-cCcccchhhhhc----CCCCccccccccce
Q psy2733 478 MNTCTICMERCRNT-------IFL-CGHGTCDVCAKT----LKFCHMCRKLIEQR 520 (644)
Q Consensus 478 ~~~C~iC~~~~~~~-------~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~ 520 (644)
+..|+||++...+. +.. |||.+|..|... -..||+||.++...
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 57 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 57 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCcc
Confidence 46799999987764 777 999999999984 35899999999863
No 148
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.19 E-value=1e-06 Score=91.38 Aligned_cols=45 Identities=29% Similarity=0.628 Sum_probs=40.1
Q ss_pred hcCcccccccCCcCeEEe-cCcccchhhhh-----cCCCCccccccccceE
Q psy2733 477 EMNTCTICMERCRNTIFL-CGHGTCDVCAK-----TLKFCHMCRKLIEQRI 521 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~-----~~~~Cp~Cr~~i~~~~ 521 (644)
....|+||++...+++++ |||.+|..|.. ....||+||.++....
T Consensus 331 ~~~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~ 381 (389)
T 2y1n_A 331 TFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 381 (389)
T ss_dssp SSSBCTTTSSSBCCEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEE
T ss_pred CCCCCCccCcCCCCeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCce
Confidence 346899999999999999 99999999997 3578999999999865
No 149
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.16 E-value=7.5e-07 Score=70.67 Aligned_cols=47 Identities=26% Similarity=0.627 Sum_probs=38.8
Q ss_pred hhhhhhcCcccccccCCcCeEEe--cCcccchhhhhcC------CCCcccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKTL------KFCHMCRKLIE 518 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~------~~Cp~Cr~~i~ 518 (644)
.+.+.++..|+||++...+.+.+ |||.||..|.... ..||+||+++.
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 9 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp CCCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred cccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 34566778899999999998877 9999999999742 48999999643
No 150
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.14 E-value=9.3e-07 Score=80.42 Aligned_cols=48 Identities=25% Similarity=0.542 Sum_probs=40.8
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC-----CCCccccccccce
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-----KFCHMCRKLIEQR 520 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~~~ 520 (644)
..+.+...|+||++...+.+.+ |||.||..|.... ..||+||.++...
T Consensus 73 ~~l~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 73 KKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred HhCccCCEeecCChhhcCCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 3455668899999999999999 9999999999843 3799999998854
No 151
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.13 E-value=1.1e-06 Score=70.53 Aligned_cols=45 Identities=16% Similarity=0.314 Sum_probs=39.4
Q ss_pred hhhcCcccccccCCcCeEEe-cCcccchhhhhc-----CCCCccccccccc
Q psy2733 475 IEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT-----LKFCHMCRKLIEQ 519 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~-----~~~Cp~Cr~~i~~ 519 (644)
+.++..|+||++...+.+.+ |||.||..|... ...||+||.++..
T Consensus 5 ~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 5 FPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp CSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred CcccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 45678999999999999999 999999999873 4579999999874
No 152
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.13 E-value=4.7e-07 Score=71.11 Aligned_cols=45 Identities=31% Similarity=0.779 Sum_probs=37.5
Q ss_pred hhcCcccccccCCcCe-------EEe-cCcccchhhhhc----CCCCccccccccce
Q psy2733 476 EEMNTCTICMERCRNT-------IFL-CGHGTCDVCAKT----LKFCHMCRKLIEQR 520 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~-------~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~ 520 (644)
+++..|.||++...+. +.+ |||.+|..|... -..||+||.++...
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 64 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChh
Confidence 4567899999988775 777 999999999974 36899999998853
No 153
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.11 E-value=1.3e-06 Score=73.47 Aligned_cols=48 Identities=23% Similarity=0.724 Sum_probs=40.0
Q ss_pred hhhhhhcCcccccccCCcCeEEe--cCcccchhhhhc----CCCCccccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKT----LKFCHMCRKLIEQ 519 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~----~~~Cp~Cr~~i~~ 519 (644)
++.+++...|+||++...+.+.+ |||.||..|... -..||+||.++..
T Consensus 16 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 16 MKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp GHHHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred HHhCCCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 44556677899999999998776 999999999874 3589999999874
No 154
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=7.7e-07 Score=70.79 Aligned_cols=46 Identities=30% Similarity=0.855 Sum_probs=40.5
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeec
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTT 446 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~ 446 (644)
.|.||++.. ....+.||||.+.|..|....+.||+||..|..++++
T Consensus 27 ~C~IC~~~~-~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i 72 (75)
T 2ecg_A 27 LCKICMDRN-IAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKI 72 (75)
T ss_dssp SCSSSCSSC-CCBCCSSSCCCCBCHHHHHHCSBCTTTCCBCCCCCBC
T ss_pred CCCcCCCCC-CCEEEecCCCHHHHHHHhhCCCCCccCCceecCcEEE
Confidence 599999987 6667779999989999999999999999999887653
No 155
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.10 E-value=1e-06 Score=69.87 Aligned_cols=46 Identities=30% Similarity=0.855 Sum_probs=40.8
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeec
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTT 446 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~ 446 (644)
.|.||++.. ....+.||||.+.|..|....+.||+||+.|..++++
T Consensus 26 ~C~iC~~~~-~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i 71 (74)
T 4ic3_A 26 LCKICMDRN-IAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKI 71 (74)
T ss_dssp BCTTTSSSB-CCEEEETTCCBCCCHHHHTTCSBCTTTCCBCSEEEEC
T ss_pred CCCCCCCCC-CCEEEcCCCChhHHHHhhhcCccCCCcCcCccCcEEE
Confidence 599999998 5566669999999999999999999999999988754
No 156
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.10 E-value=1.4e-06 Score=64.64 Aligned_cols=44 Identities=23% Similarity=0.707 Sum_probs=35.5
Q ss_pred hhhcCcccccccCCcC----eEEe-cCcccchhhhhc----CCCCcccccccc
Q psy2733 475 IEEMNTCTICMERCRN----TIFL-CGHGTCDVCAKT----LKFCHMCRKLIE 518 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~----~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~ 518 (644)
+++...|.||++...+ ..+. |||.+|..|... -..||+||.++.
T Consensus 2 ~~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 3556789999999877 4455 999999999985 358999999874
No 157
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.08 E-value=1.2e-06 Score=74.96 Aligned_cols=48 Identities=23% Similarity=0.645 Sum_probs=41.4
Q ss_pred hhhhhhcCcccccccCCcCeEEe--cCcccchhhhhcC----CCCccccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKTL----KFCHMCRKLIEQ 519 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~----~~Cp~Cr~~i~~ 519 (644)
++.++++..|+||++...+.+.+ |||.||..|.... ..||+||.++..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 9 ITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp HHHHGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred hhccCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 45667788999999999998885 9999999999843 689999999875
No 158
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.08 E-value=9.7e-07 Score=76.56 Aligned_cols=45 Identities=29% Similarity=0.678 Sum_probs=39.1
Q ss_pred hhhcCcccccccCCcCeEEe-cCcccchhhhhcC-----CCCccccccccc
Q psy2733 475 IEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-----KFCHMCRKLIEQ 519 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~~ 519 (644)
..++..|+||++...+.+.+ |||.||..|.... ..||+||.++..
T Consensus 12 ~~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 12 SLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp CHHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCCCccCCcccCceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 34456799999999999999 9999999999864 379999999975
No 159
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.08 E-value=4.2e-07 Score=78.73 Aligned_cols=56 Identities=18% Similarity=0.428 Sum_probs=39.0
Q ss_pred HHHHHHHHhhhhhhhcCcccccccCCcC------------------eEEe-cCcccchhhhhc---------CCCCcccc
Q psy2733 463 ERVNYLESKISEIEEMNTCTICMERCRN------------------TIFL-CGHGTCDVCAKT---------LKFCHMCR 514 (644)
Q Consensus 463 ~~~~~l~~~~~~~~~~~~C~iC~~~~~~------------------~~~~-CgH~~C~~C~~~---------~~~Cp~Cr 514 (644)
+.+++..+..... .+..|.||++.... ++++ |||.||..|... -..||+||
T Consensus 11 ~~i~~~~~~~~~~-~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR 89 (114)
T 1v87_A 11 QVIRKYTEELKVA-PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCK 89 (114)
T ss_dssp HHHHHHEEECSSC-CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTC
T ss_pred HHHHHHHHhccCC-CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCC
Confidence 4444444443333 33589999998744 2367 999999999873 24799999
Q ss_pred ccccc
Q psy2733 515 KLIEQ 519 (644)
Q Consensus 515 ~~i~~ 519 (644)
..+..
T Consensus 90 ~~~~~ 94 (114)
T 1v87_A 90 TIYGE 94 (114)
T ss_dssp CBSSS
T ss_pred CccCC
Confidence 98874
No 160
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.08 E-value=1.7e-06 Score=75.30 Aligned_cols=47 Identities=23% Similarity=0.573 Sum_probs=40.3
Q ss_pred hhhhhhcCcccccccCCcCeEEe--cCcccchhhhhcC--CCCcccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKTL--KFCHMCRKLIE 518 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~--~~Cp~Cr~~i~ 518 (644)
++.+++...|+||++...+.+.+ |||.||..|.... ..||+||.++.
T Consensus 16 ~~~l~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 16 LDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HHHHHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred HHhchhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 44556778899999999998876 9999999999975 57999999974
No 161
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.08 E-value=1.3e-06 Score=68.19 Aligned_cols=47 Identities=32% Similarity=0.589 Sum_probs=37.2
Q ss_pred hhhcCcccccccCC---cCeEEe-cCcccchhhhhc----CCCCccccccccceE
Q psy2733 475 IEEMNTCTICMERC---RNTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQRI 521 (644)
Q Consensus 475 ~~~~~~C~iC~~~~---~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~~ 521 (644)
.++...|.||++.. ..++.+ |||.||..|... -..||+||.++...+
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQL 65 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSCC
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCcC
Confidence 34557899998765 456777 999999999984 357999999998654
No 162
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.03 E-value=9.6e-07 Score=73.25 Aligned_cols=46 Identities=26% Similarity=0.668 Sum_probs=38.7
Q ss_pred hhhhhcCcccccccCCcCeEEe--cCcccchhhhhcC------CCCcccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKTL------KFCHMCRKLIE 518 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~------~~Cp~Cr~~i~ 518 (644)
..+.++..|+||++...+.+.+ |||.||..|.... ..||+||.++.
T Consensus 8 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 8 DPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred ccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 3556778999999999998887 8999999999742 48999999863
No 163
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.02 E-value=1.7e-06 Score=71.66 Aligned_cols=44 Identities=23% Similarity=0.477 Sum_probs=36.5
Q ss_pred hhcCcccccccCCcC---eEEe-cCcccchhhhhc----CCCCccccccccc
Q psy2733 476 EEMNTCTICMERCRN---TIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQ 519 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~---~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~ 519 (644)
+++..|.||++.... ++.+ |||.||..|... -..||+||.++..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 445789999988776 7778 999999999984 3589999998875
No 164
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.01 E-value=1.1e-06 Score=65.94 Aligned_cols=41 Identities=24% Similarity=0.852 Sum_probs=35.0
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC-------CCCccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-------KFCHMC 513 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-------~~Cp~C 513 (644)
+.+++...|.||++...+.+.+ |||.||..|.... ..||+|
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 10 ENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp SCSCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred hccccCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3456678899999999999999 9999999998743 479998
No 165
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.00 E-value=2.2e-06 Score=65.48 Aligned_cols=42 Identities=26% Similarity=0.818 Sum_probs=35.9
Q ss_pred hhhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC-------CCCccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-------KFCHMC 513 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-------~~Cp~C 513 (644)
.+.++++..|+||++...+.+.+ |||.||..|.... ..||+|
T Consensus 14 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 14 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCCCCBCTTTCSBCSSCEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred HHhCccCCCCCcCCchhCCeEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 34567778999999999999999 9999999998742 379998
No 166
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.00 E-value=1.4e-06 Score=68.94 Aligned_cols=49 Identities=22% Similarity=0.506 Sum_probs=38.1
Q ss_pred hhhhhcCcccccccCCc---CeEEe-cCcccchhhhhc----CCCCccccccccceE
Q psy2733 473 SEIEEMNTCTICMERCR---NTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQRI 521 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~---~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~~ 521 (644)
.++.+...|.||++... .++.+ |||.||..|... -..||+||.++....
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2ep4_A 10 KELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLA 66 (74)
T ss_dssp CCCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCC
T ss_pred ccCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCccccccc
Confidence 44556678999998853 45566 999999999984 358999999987643
No 167
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.99 E-value=1.8e-06 Score=75.29 Aligned_cols=48 Identities=23% Similarity=0.603 Sum_probs=41.2
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC-----CCCccccccccce
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-----KFCHMCRKLIEQR 520 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~~~ 520 (644)
..+++...|+||++...+.+.+ |||.||..|.... ..||+||.++...
T Consensus 13 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 13 PPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp SCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred cCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHH
Confidence 3556678899999999999999 9999999999743 4899999998763
No 168
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.98 E-value=3.1e-06 Score=67.70 Aligned_cols=46 Identities=26% Similarity=0.536 Sum_probs=36.2
Q ss_pred hhhcCcccccccCCc---CeEEe-cCcccchhhhhc----CCCCccccccccce
Q psy2733 475 IEEMNTCTICMERCR---NTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQR 520 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~---~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~ 520 (644)
..+...|.||++... .++.+ |||.||..|... -..||+||.++...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 65 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQ 65 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCS
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCc
Confidence 455678999977654 44666 999999999984 36899999998863
No 169
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.94 E-value=2.3e-06 Score=68.01 Aligned_cols=44 Identities=25% Similarity=0.555 Sum_probs=35.3
Q ss_pred hhcCcccccccCCcC---eEEe-cCcccchhhhhc----CCCCccccccccc
Q psy2733 476 EEMNTCTICMERCRN---TIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQ 519 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~---~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~ 519 (644)
.+...|.||++.... ++.+ |||.||..|... -..||+||.++..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 445689999977654 3667 999999999984 3589999998864
No 170
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.92 E-value=4.4e-06 Score=72.48 Aligned_cols=46 Identities=22% Similarity=0.494 Sum_probs=39.7
Q ss_pred hhhhcCcccccccCCcCeEEe-cCcccchhhhhc-----CCCCccccccccc
Q psy2733 474 EIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT-----LKFCHMCRKLIEQ 519 (644)
Q Consensus 474 ~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~-----~~~Cp~Cr~~i~~ 519 (644)
++.++..|+||++...+.+.+ |||.||..|... -..||+||.++..
T Consensus 19 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 19 HFVKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred hccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 345567899999999999999 999999999873 3589999999875
No 171
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=97.88 E-value=3.5e-06 Score=68.65 Aligned_cols=48 Identities=8% Similarity=-0.020 Sum_probs=41.4
Q ss_pred hhhhhhcCcccccccCCcCeEEe-cCcccchhhhhc----CCCCccccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQ 519 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~ 519 (644)
+..+.++..|+||++...+.|.+ |||.||..|+.. ...||+||.++..
T Consensus 8 ~~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 8 YSDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp CTTCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred hhcCchheECcccCchhcCCeECCCCCEECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 34556778999999999999999 999999999874 3689999998874
No 172
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=97.87 E-value=2e-06 Score=77.37 Aligned_cols=46 Identities=24% Similarity=0.600 Sum_probs=40.0
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC-----CCCcccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-----KFCHMCRKLIE 518 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~ 518 (644)
..++++..|+||++...+.+.+ |||.||..|.... ..||+||.++.
T Consensus 26 ~~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 26 TKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGI 77 (141)
T ss_dssp GGCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTC
T ss_pred ccCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHHHhcCCCCCCCCCCccc
Confidence 4567778999999999999999 9999999999853 37999999863
No 173
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=97.85 E-value=4.9e-06 Score=69.92 Aligned_cols=48 Identities=8% Similarity=-0.057 Sum_probs=41.2
Q ss_pred hhhhhhcCcccccccCCcCeEEe-cCcccchhhhhc----CCCCccccccccc
Q psy2733 472 ISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQ 519 (644)
Q Consensus 472 ~~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~ 519 (644)
...+.++..|+||++...+.|.+ |||.||..|+.. ...||+||.++..
T Consensus 23 ~~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 23 YSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp CSSCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred hccCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHcCCCCCCCCCCCCh
Confidence 34556678999999999999999 999999999984 3589999998774
No 174
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.83 E-value=6.1e-06 Score=76.44 Aligned_cols=46 Identities=33% Similarity=0.647 Sum_probs=38.5
Q ss_pred hhhhcCcccccccCCcCeEEe--cCcccchhhhhc-----CCCCccccccccc
Q psy2733 474 EIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKT-----LKFCHMCRKLIEQ 519 (644)
Q Consensus 474 ~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~-----~~~Cp~Cr~~i~~ 519 (644)
.+.+...|+||++...+.+.+ |||.||..|... -..||+||.++..
T Consensus 50 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred hCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 345567899999999998876 999999999984 3579999999864
No 175
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=97.77 E-value=7.1e-06 Score=68.68 Aligned_cols=47 Identities=6% Similarity=-0.104 Sum_probs=40.7
Q ss_pred hhhhhcCcccccccCCcCeEEe-cC-cccchhhhhc----CCCCccccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CG-HGTCDVCAKT----LKFCHMCRKLIEQ 519 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-Cg-H~~C~~C~~~----~~~Cp~Cr~~i~~ 519 (644)
..+.++..|+||++...+.|.+ || |.||..|+.. ...||+||.++..
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 4556778999999999999999 99 9999999984 3579999998764
No 176
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.57 E-value=4e-05 Score=61.72 Aligned_cols=43 Identities=21% Similarity=0.569 Sum_probs=33.1
Q ss_pred cCcccccccCCcC---------------eEEe-cCcccchhhhhc----CCCCccccccccce
Q psy2733 478 MNTCTICMERCRN---------------TIFL-CGHGTCDVCAKT----LKFCHMCRKLIEQR 520 (644)
Q Consensus 478 ~~~C~iC~~~~~~---------------~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~ 520 (644)
+..|.||++...+ +++. |||.|+..|... -..||+||+++...
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQ 77 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchh
Confidence 3468888887754 3556 999999999984 35899999997643
No 177
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=97.57 E-value=2.5e-05 Score=72.59 Aligned_cols=47 Identities=23% Similarity=0.614 Sum_probs=41.1
Q ss_pred hhhhhcCcccccccCCcCeEEe-cCcccchhhhhcC-----CCCccccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-----KFCHMCRKLIEQ 519 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~~ 519 (644)
..+++...|+||++...+.+.+ |||.||..|.... ..||+||.++..
T Consensus 13 ~~~~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 13 PPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp SCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred cCCCCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 4566778999999999999999 9999999999853 489999999876
No 178
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.53 E-value=2.1e-05 Score=69.66 Aligned_cols=45 Identities=31% Similarity=0.779 Sum_probs=37.8
Q ss_pred hhcCcccccccCCcCe-------EEe-cCcccchhhhhc----CCCCccccccccce
Q psy2733 476 EEMNTCTICMERCRNT-------IFL-CGHGTCDVCAKT----LKFCHMCRKLIEQR 520 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~-------~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~~~ 520 (644)
.++..|.||++...+. +.+ |||.||..|... -..||+||+++...
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 61 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 61 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTT
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccc
Confidence 3456899999998776 788 999999999974 35899999999864
No 179
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=97.49 E-value=2.9e-05 Score=80.15 Aligned_cols=47 Identities=36% Similarity=0.902 Sum_probs=41.5
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeec
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTT 446 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~ 446 (644)
..|.||++.. ....+.||||.+.|..|....+.||.||..|..++++
T Consensus 296 ~~C~IC~~~~-~~~v~lpCgH~~fC~~C~~~~~~CP~CR~~i~~~~~i 342 (345)
T 3t6p_A 296 RTCKVCMDKE-VSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRT 342 (345)
T ss_dssp CBCTTTSSSB-CCEEEETTCCEEECTTTGGGCSBCTTTCCBCCEEEEC
T ss_pred CCCCccCCcC-CceEEcCCCChhHhHHHHhcCCcCCCCCCCccCeEEe
Confidence 3599999998 5566669999999999999999999999999998764
No 180
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.34 E-value=7.8e-05 Score=75.06 Aligned_cols=43 Identities=16% Similarity=0.101 Sum_probs=37.4
Q ss_pred hcCcccccccCCcCeEEe-cCcccchhhhhcC-----CCCccccccccc
Q psy2733 477 EMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-----KFCHMCRKLIEQ 519 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~~ 519 (644)
+...|+||++...+.|.+ |||.||..|+... ..||+||.+++.
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 457899999999999999 9999999998832 349999999874
No 181
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=97.22 E-value=0.00026 Score=65.57 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=38.4
Q ss_pred hhhcCcccccccCCcCeEEe-cCcccchhhhhcC-----CCCccccccccc
Q psy2733 475 IEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-----KFCHMCRKLIEQ 519 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~-----~~Cp~Cr~~i~~ 519 (644)
+.+...|+||++...+.|.+ |||.||..|+... ..||+||.++..
T Consensus 103 ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 103 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp CCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 34558999999999999999 9999999998732 259999998875
No 182
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.11 E-value=0.00025 Score=60.03 Aligned_cols=40 Identities=20% Similarity=0.487 Sum_probs=32.1
Q ss_pred CcccccccCCcC------------------eEEe-cCcccchhhhhc----CCCCcccccccc
Q psy2733 479 NTCTICMERCRN------------------TIFL-CGHGTCDVCAKT----LKFCHMCRKLIE 518 (644)
Q Consensus 479 ~~C~iC~~~~~~------------------~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~ 518 (644)
..|.||++.... ++.+ |||.|+..|+.. -..||+||.+..
T Consensus 38 d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 38 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp CCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcce
Confidence 579999887653 4556 999999999984 358999999854
No 183
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.06 E-value=0.00017 Score=59.71 Aligned_cols=43 Identities=23% Similarity=0.474 Sum_probs=36.1
Q ss_pred hhcCcccccccCCcCeEEe--cCcccchhhhhcC----------CCCcc--cccc-cc
Q psy2733 476 EEMNTCTICMERCRNTIFL--CGHGTCDVCAKTL----------KFCHM--CRKL-IE 518 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~----------~~Cp~--Cr~~-i~ 518 (644)
.++..|+||++...+.|.+ |||.||..|+... ..||+ |+.. +.
T Consensus 5 ~~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~ 62 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIR 62 (94)
T ss_dssp SSCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBC
T ss_pred CcEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccC
Confidence 4567899999999999987 9999999998732 38999 9866 54
No 184
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.00026 Score=68.90 Aligned_cols=46 Identities=15% Similarity=0.264 Sum_probs=38.5
Q ss_pred hhhhcCcccccccCCcCeEE-e-cCcccchhhhhcC------CCCcc--ccccccc
Q psy2733 474 EIEEMNTCTICMERCRNTIF-L-CGHGTCDVCAKTL------KFCHM--CRKLIEQ 519 (644)
Q Consensus 474 ~~~~~~~C~iC~~~~~~~~~-~-CgH~~C~~C~~~~------~~Cp~--Cr~~i~~ 519 (644)
....+..|+||++...+.|. . |||.||..|+... ..||+ ||+.+..
T Consensus 177 ~~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 177 GGKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp SSBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred CCceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 34566899999999999997 4 9999999999843 26999 9998764
No 185
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=96.84 E-value=0.00097 Score=54.39 Aligned_cols=51 Identities=24% Similarity=0.448 Sum_probs=36.7
Q ss_pred cccccccCCcCeE-Ee-cCcccchhhhh-----cCCCCccccccccceEEEEE--eeecC
Q psy2733 480 TCTICMERCRNTI-FL-CGHGTCDVCAK-----TLKFCHMCRKLIEQRINISR--AFVSP 530 (644)
Q Consensus 480 ~C~iC~~~~~~~~-~~-CgH~~C~~C~~-----~~~~Cp~Cr~~i~~~~~~~~--~~~~~ 530 (644)
.|.+|--...... .. |+|++|.+|+. .-+.||+||.+|.+.-+..+ .|+-.
T Consensus 3 fC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe~~~~~~if~C~ 62 (101)
T 3vk6_A 3 FCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCS 62 (101)
T ss_dssp BCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEEEEEGGGCCCCC
T ss_pred ecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeEEeccCCEEECC
Confidence 5777866655543 44 99999999995 45789999999997665433 44444
No 186
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=96.55 E-value=0.0014 Score=50.32 Aligned_cols=46 Identities=33% Similarity=0.646 Sum_probs=37.0
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh----hhhhccccceeeeee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRVT 445 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~~ 445 (644)
..|.||.+.....+...||||. .|..|.... ..||.||..+...+.
T Consensus 6 ~~C~IC~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 55 (68)
T 1chc_A 6 ERCPICLEDPSNYSMALPCLHA-FCYVCITRWIRQNPTCPLCKVPVESVVH 55 (68)
T ss_dssp CCCSSCCSCCCSCEEETTTTEE-ESTTHHHHHHHHSCSTTTTCCCCCCEEC
T ss_pred CCCeeCCccccCCcEecCCCCe-eHHHHHHHHHhCcCcCcCCChhhHhhhh
Confidence 4699999986444567799999 799999764 379999999987654
No 187
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=96.52 E-value=0.0004 Score=59.68 Aligned_cols=40 Identities=20% Similarity=0.487 Sum_probs=0.0
Q ss_pred CcccccccCCcC------------------eEEe-cCcccchhhhhc----CCCCcccccccc
Q psy2733 479 NTCTICMERCRN------------------TIFL-CGHGTCDVCAKT----LKFCHMCRKLIE 518 (644)
Q Consensus 479 ~~C~iC~~~~~~------------------~~~~-CgH~~C~~C~~~----~~~Cp~Cr~~i~ 518 (644)
..|.||++...+ ++.. |||.|+..|+.. -..||+||.+..
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp ---------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeee
Confidence 479999887654 3445 999999999985 357999999853
No 188
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.49 E-value=0.001 Score=51.79 Aligned_cols=43 Identities=30% Similarity=0.723 Sum_probs=34.7
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh----hhhhccccceeee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMR 443 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~ 443 (644)
..|.||++.. ......||||. .|..|.... ..||+||..+...
T Consensus 16 ~~C~IC~~~~-~~~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 16 PECAICLQTC-VHPVSLPCKHV-FCYLCVKGASWLGKRCALCRQEIPED 62 (71)
T ss_dssp CBCSSSSSBC-SSEEEETTTEE-EEHHHHHHCTTCSSBCSSSCCBCCHH
T ss_pred CCCccCCccc-CCCEEccCCCH-HHHHHHHHHHHCCCcCcCcCchhCHh
Confidence 5699999987 44445599999 799999875 4799999998753
No 189
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=96.48 E-value=0.0012 Score=58.90 Aligned_cols=43 Identities=26% Similarity=0.675 Sum_probs=34.1
Q ss_pred ccccccccccceEEecCCCccccchhhHHHh----hhhhccccceeeee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRV 444 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~ 444 (644)
.|.||.+.. ......||||. .|..|.... ..||.||..+....
T Consensus 55 ~C~iC~~~~-~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 101 (138)
T 4ayc_A 55 QCIICSEYF-IEAVTLNCAHS-FCSYCINEWMKRKIECPICRKDIKSKT 101 (138)
T ss_dssp BCTTTCSBC-SSEEEETTSCE-EEHHHHHHHTTTCSBCTTTCCBCCCEE
T ss_pred CCcccCccc-CCceECCCCCC-ccHHHHHHHHHcCCcCCCCCCcCCCCC
Confidence 499999987 44455599995 799999765 37999999986543
No 190
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.45 E-value=0.0013 Score=51.39 Aligned_cols=42 Identities=29% Similarity=0.730 Sum_probs=33.9
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh-------hhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK-------KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-------~Cp~Cr~~i~~ 442 (644)
..|.||.+... .....||||. .|..|..... .||+||+.+..
T Consensus 21 ~~C~IC~~~~~-~~~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 21 VICPICLDILQ-KPVTIDCGHN-FCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CBCTTTCSBCS-SEEECTTCCE-EEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred CEeccCCcccC-CeEEcCCCCh-hhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 56999999874 4444599999 6999998764 69999998864
No 191
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.44 E-value=0.0008 Score=55.63 Aligned_cols=40 Identities=23% Similarity=0.536 Sum_probs=30.5
Q ss_pred hcCcccccccCCcCe---EEe-cCcccchhhhhc------------CCCCcc--cccc
Q psy2733 477 EMNTCTICMERCRNT---IFL-CGHGTCDVCAKT------------LKFCHM--CRKL 516 (644)
Q Consensus 477 ~~~~C~iC~~~~~~~---~~~-CgH~~C~~C~~~------------~~~Cp~--Cr~~ 516 (644)
+...|.||++..... .+. |||.||..|... ...||. ||..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 356799999886653 234 999999999761 137999 9988
No 192
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.15 E-value=0.0016 Score=50.41 Aligned_cols=43 Identities=26% Similarity=0.787 Sum_probs=34.9
Q ss_pred ccccccccccccceEEecCCCccccchhhHHHh----hhhhccccceeee
Q psy2733 398 PVECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMR 443 (644)
Q Consensus 398 ~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~ 443 (644)
...|.||++.... ...||||. .|..|.... ..||.||..+...
T Consensus 15 ~~~C~IC~~~~~~--~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 61 (70)
T 2ecn_A 15 EEECCICMDGRAD--LILPCAHS-FCQKCIDKWSDRHRNCPICRLQMTGA 61 (70)
T ss_dssp CCCCSSSCCSCCS--EEETTTEE-ECHHHHHHSSCCCSSCHHHHHCTTCC
T ss_pred CCCCeeCCcCccC--cccCCCCc-ccHHHHHHHHHCcCcCCCcCCcccCC
Confidence 3569999998744 55599999 799999875 4799999988754
No 193
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.12 E-value=0.0039 Score=48.50 Aligned_cols=45 Identities=20% Similarity=0.648 Sum_probs=35.6
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh----hhhhccccceeeee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRV 444 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~ 444 (644)
..|.||.+.....+.+.||||. .|..|.... ..||.||..+...-
T Consensus 16 ~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 16 ILCSICKGYLIDATTITECLHT-FCKSCIVRHFYYSNRCPKCNIVVHQTQ 64 (72)
T ss_dssp GSCTTTSSCCSSCEECSSSCCE-ECHHHHHHHHHHCSSCTTTCCCCCSSC
T ss_pred CCCCCCChHHHCcCEECCCCCH-HHHHHHHHHHHcCCcCCCcCcccCccc
Confidence 5699999987455555699997 599999665 37999999987643
No 194
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.10 E-value=0.0021 Score=49.34 Aligned_cols=44 Identities=23% Similarity=0.620 Sum_probs=33.3
Q ss_pred ccccccccccccc------eEEecCCCccccchhhHHHh----hhhhccccceee
Q psy2733 398 PVECAVCSELGVA------NVLLKPCNHAVACEECSSRM----KKCIMCKTFIEM 442 (644)
Q Consensus 398 ~~~C~iC~d~~~~------~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~ 442 (644)
...|.||++.... .+...||||. .|..|.... ..||+||..+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECSSSCE-EEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCcccCccccccccccCCeEeCCCCCh-hcHHHHHHHHHcCCCCCCCCCccCc
Confidence 3569999986422 1255699996 799999775 379999998865
No 195
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.07 E-value=0.0028 Score=48.21 Aligned_cols=42 Identities=24% Similarity=0.655 Sum_probs=31.9
Q ss_pred ccccccc-c---ccceEEecCCCccccchhhHHHh-----hhhhccccceee
Q psy2733 400 ECAVCSE-L---GVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d-~---~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~ 442 (644)
.|.||.+ . +...+...||||. .|.+|..+. ..||.||..+..
T Consensus 5 ~C~IC~~~~~~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 5 GCPRCKTTKYRNPSLKLMVNVCGHT-LCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp CCSTTTTHHHHCSSCCEEECTTCCC-EEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred cCCcCCCCccCCCccCeecCCCCCH-hHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 5999999 3 3222245699998 699999887 369999998865
No 196
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=96.04 E-value=0.0028 Score=46.25 Aligned_cols=42 Identities=24% Similarity=0.524 Sum_probs=32.7
Q ss_pred cccccccccccc---eEEecCCCccccchhhHHHh----hhhhcccccee
Q psy2733 399 VECAVCSELGVA---NVLLKPCNHAVACEECSSRM----KKCIMCKTFIE 441 (644)
Q Consensus 399 ~~C~iC~d~~~~---~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~ 441 (644)
..|.||++.... .+...||+|. .|..|.... ..||+||..+.
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHL-LHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCE-EETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CcCcccChhhcCCCcCeEecCCCCc-ccHHHHHHHHHcCCcCCCCCCcCC
Confidence 469999986422 3677799996 799999776 37999998764
No 197
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=96.01 E-value=0.0026 Score=65.92 Aligned_cols=46 Identities=26% Similarity=0.705 Sum_probs=37.8
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceeeeeec
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEMRVTT 446 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~~~~~ 446 (644)
..|.||.+.. ......||||.. |..|.... ..||.||+.+.....+
T Consensus 333 ~~C~ICle~~-~~pv~lpCGH~F-C~~Ci~~wl~~~~~~CP~CR~~i~~~~~i 383 (389)
T 2y1n_A 333 QLCKICAEND-KDVKIEPCGHLM-CTSCLTSWQESEGQGCPFCRCEIKGTEPI 383 (389)
T ss_dssp SBCTTTSSSB-CCEEEETTCCEE-CHHHHHHHHHHTCSBCTTTCCBCCEEEEC
T ss_pred CCCCccCcCC-CCeEEeCCCChh-hHHHHHHHHhcCCCCCCCCCCccCCceeE
Confidence 5799999987 556667999995 99999754 5799999999886644
No 198
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.96 E-value=0.0042 Score=49.57 Aligned_cols=43 Identities=26% Similarity=0.668 Sum_probs=33.9
Q ss_pred ccccccccccccceEEecCCCccccchhhHHHhh----hhhccccceee
Q psy2733 398 PVECAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMCKTFIEM 442 (644)
Q Consensus 398 ~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~ 442 (644)
...|.||.+.. ......||||. .|..|..... .||+||..+..
T Consensus 15 ~~~C~IC~~~~-~~p~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (81)
T 2csy_A 15 PFRCFICRQAF-QNPVVTKCRHY-FCESCALEHFRATPRCYICDQPTGG 61 (81)
T ss_dssp CSBCSSSCSBC-CSEEECTTSCE-EEHHHHHHHHHHCSBCSSSCCBCCS
T ss_pred CCCCcCCCchh-cCeeEccCCCH-hHHHHHHHHHHCCCcCCCcCccccc
Confidence 35699999987 44445699998 5999997764 69999999863
No 199
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=95.92 E-value=0.0066 Score=46.67 Aligned_cols=46 Identities=28% Similarity=0.630 Sum_probs=35.2
Q ss_pred ccccccccccc--ceEEecCCCccccchhhHHHh----hhhhccccceeeeee
Q psy2733 399 VECAVCSELGV--ANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRVT 445 (644)
Q Consensus 399 ~~C~iC~d~~~--~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~~ 445 (644)
..|.||++... ..+...||||. .|..|.... ..||+||..+....+
T Consensus 15 ~~C~IC~~~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (69)
T 2kiz_A 15 EKCTICLSILEEGEDVRRLPCMHL-FHQVCVDQWLITNKKCPICRVDIEAQLP 66 (69)
T ss_dssp CSBTTTTBCCCSSSCEEECTTSCE-EEHHHHHHHHHHCSBCTTTCSBSCSCCC
T ss_pred CCCeeCCccccCCCcEEEeCCCCH-HHHHHHHHHHHcCCCCcCcCccccCcCC
Confidence 56999987531 34566699998 699999765 379999999877653
No 200
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.91 E-value=0.0035 Score=50.74 Aligned_cols=43 Identities=26% Similarity=0.750 Sum_probs=33.2
Q ss_pred cccccccccccc---eEEecCCCccccchhhHHHh-------hhhhccccceee
Q psy2733 399 VECAVCSELGVA---NVLLKPCNHAVACEECSSRM-------KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~---~v~~~PC~h~~~C~~C~~~~-------~~Cp~Cr~~i~~ 442 (644)
..|.||.+.... .....||||. .|..|.... ..||.||..+..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 16 LECPICMESFTEEQLRPKLLHCGHT-ICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CBCTTTCCBCCTTSSCEEECSSSCE-EEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred CCCccCCccccccCCCeEECCCCCh-hhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 569999987533 1455599997 699999776 479999998754
No 201
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=95.86 E-value=0.0022 Score=50.86 Aligned_cols=45 Identities=27% Similarity=0.592 Sum_probs=34.3
Q ss_pred ccccccccccc-ceEEecC--CCccccchhhHHHhh-----hhhccccceeeee
Q psy2733 399 VECAVCSELGV-ANVLLKP--CNHAVACEECSSRMK-----KCIMCKTFIEMRV 444 (644)
Q Consensus 399 ~~C~iC~d~~~-~~v~~~P--C~h~~~C~~C~~~~~-----~Cp~Cr~~i~~~~ 444 (644)
..|.||++... ....+.| |||. .|..|...++ .||.||+.+....
T Consensus 12 ~~CpICle~~~~~d~~~~p~~CGH~-fC~~Cl~~~~~~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 12 VECPLCMEPLEIDDINFFPCTCGYQ-ICRFCWHRIRTDENGLCPACRKPYPEDP 64 (78)
T ss_dssp CBCTTTCCBCCTTTTTCCSSTTSCC-CCHHHHHHHTTSSCSBCTTTCCBCSSCS
T ss_pred CcCCccCccCccccccccccCCCCC-cCHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 45999999542 2234445 9998 6999998885 8999999998754
No 202
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.60 E-value=0.011 Score=46.02 Aligned_cols=49 Identities=27% Similarity=0.441 Sum_probs=36.0
Q ss_pred cccccccccccc--ceEEecCCCccccchhhHHHh----hhhhccccceeeeeecC
Q psy2733 398 PVECAVCSELGV--ANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRVTTD 447 (644)
Q Consensus 398 ~~~C~iC~d~~~--~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~~~~ 447 (644)
...|.||++... ..+...||+|. .|..|.... ..||+||..+....+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~-f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 69 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHA-FHRKCLIKWLEVRKVCPLCNMPVLQLAQLS 69 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEE-EEHHHHHHHHHHCSBCTTTCCBCSSCCSCC
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCE-ecHHHHHHHHHcCCcCCCcCcccccccccC
Confidence 356999998632 23344499998 799999764 37999999997765543
No 203
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=95.58 E-value=0.0059 Score=50.92 Aligned_cols=43 Identities=23% Similarity=0.593 Sum_probs=34.0
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~ 442 (644)
..|.||++....-+.+.||||. .|..|.... ..||.||..+..
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~-FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 23 FRCFICMEKLRDARLCPHCSKL-CCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp TBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCccCCccccCccccCCCCCh-hhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 3599999987455554799998 599999764 379999999853
No 204
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.44 E-value=0.0054 Score=49.13 Aligned_cols=42 Identities=31% Similarity=0.706 Sum_probs=33.0
Q ss_pred cccccccccccceEEecCCCccccchhhHHH----------hhhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSR----------MKKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~----------~~~Cp~Cr~~i~~ 442 (644)
..|.||.+.....+ ..||||. .|..|... ...||.||..+..
T Consensus 20 ~~C~IC~~~~~~p~-~~~CgH~-fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 20 VTCPICLELLKEPV-SADCNHS-FCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TSCTTTCSCCSSCE-ECTTSCC-BCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred CCCcCCChhhCcce-eCCCCCH-HHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 46999999863444 4599997 69999976 3479999998864
No 205
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=95.38 E-value=0.0077 Score=52.38 Aligned_cols=41 Identities=27% Similarity=0.703 Sum_probs=32.6
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhh-----hhhccccceee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~ 442 (644)
.|.||.+....- ...||||. .|..|..... .||.||..+..
T Consensus 54 ~C~IC~~~~~~p-~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 54 QCICCQELVFRP-ITTVCQHN-VCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp BCTTTSSBCSSE-EECTTSCE-EEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCcCChHHcCc-EEeeCCCc-ccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 499999987444 44599998 6999997653 89999998865
No 206
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=95.37 E-value=0.0087 Score=49.72 Aligned_cols=42 Identities=21% Similarity=0.631 Sum_probs=33.3
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhh----hhhccccceee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~ 442 (644)
.|.||.+.....+...||||. .|..|..... .||.||..+..
T Consensus 24 ~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 24 RCGICFEYFNIAMIIPQCSHN-YCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp BCTTTCSBCSSEEECTTTCCE-EEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CcccCChhhCCcCEECCCCCH-hhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 599999987444445599998 5999997753 79999998864
No 207
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=95.34 E-value=0.005 Score=47.55 Aligned_cols=43 Identities=23% Similarity=0.635 Sum_probs=32.9
Q ss_pred cccccccccccce------EEecCCCccccchhhHHHh----hhhhccccceee
Q psy2733 399 VECAVCSELGVAN------VLLKPCNHAVACEECSSRM----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~------v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~ 442 (644)
..|.||++..... +...||||. .|..|..+. ..||.||..+..
T Consensus 11 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 11 VSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp CBCTTTCCBHHHHHTTTCCEEECTTSCE-EEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCcccChhhhccccccCCeEeCCCCCh-HhHHHHHHHHHcCCCCCCCCCccCh
Confidence 4699999864222 256699997 699999765 389999998864
No 208
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=95.34 E-value=0.0095 Score=46.99 Aligned_cols=46 Identities=28% Similarity=0.577 Sum_probs=34.5
Q ss_pred cccccccccccc--ceEEecCCCccccchhhHHHh----hhhhccccceeeee
Q psy2733 398 PVECAVCSELGV--ANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMRV 444 (644)
Q Consensus 398 ~~~C~iC~d~~~--~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~~ 444 (644)
...|.||++... ..+...||+|. .|..|..+. ..||+||..+....
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLPCNHL-FHDSCIVPWLEQHDSCPVCRKSLTGQN 66 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECTTSCE-EETTTTHHHHTTTCSCTTTCCCCCCSC
T ss_pred CCCCeeCCccccCCCCEEEeCCCCe-ecHHHHHHHHHcCCcCcCcCCccCCcc
Confidence 357999987532 33455599997 799999765 37999999987643
No 209
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.31 E-value=0.0049 Score=46.99 Aligned_cols=43 Identities=26% Similarity=0.601 Sum_probs=33.2
Q ss_pred ccccccccccccceEEecCCCccccchhhHHHhh-----hhhccccceee
Q psy2733 398 PVECAVCSELGVANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEM 442 (644)
Q Consensus 398 ~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~ 442 (644)
...|.||.+.....+. .||||. .|..|..... .||.||+.+..
T Consensus 15 ~~~C~IC~~~~~~p~~-~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 15 KYKCEKCHLVLCSPKQ-TECGHR-FCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CEECTTTCCEESSCCC-CSSSCC-CCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred CCCCCCCChHhcCeeE-CCCCCH-HHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 3569999987633333 599998 6999998653 79999998754
No 210
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.28 E-value=0.011 Score=47.02 Aligned_cols=45 Identities=18% Similarity=0.527 Sum_probs=33.4
Q ss_pred hhcCcccccccCC--cCeEEe-cC-----cccchhhhhcC------CCCccccccccce
Q psy2733 476 EEMNTCTICMERC--RNTIFL-CG-----HGTCDVCAKTL------KFCHMCRKLIEQR 520 (644)
Q Consensus 476 ~~~~~C~iC~~~~--~~~~~~-Cg-----H~~C~~C~~~~------~~Cp~Cr~~i~~~ 520 (644)
.++..|.||++.. .+.+.+ |+ |.+...|..+. ..||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~ 71 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIME 71 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCC
T ss_pred CCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecC
Confidence 3446899999754 234556 96 99999999842 4899999988643
No 211
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=95.27 E-value=0.0087 Score=50.63 Aligned_cols=44 Identities=23% Similarity=0.632 Sum_probs=35.0
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh----hhhhccccceeee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEMR 443 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~ 443 (644)
..|.||.+....-+...||||. .|..|.... ..||.||..+...
T Consensus 16 ~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 16 LMCVLCGGYFIDATTIIECLHS-FCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp TBCTTTSSBCSSEEEETTTCCE-EEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CCCccCChHHhCcCEeCCCCCh-hhHHHHHHHHHhCCcCcCCCcccccc
Confidence 3599999987455555599997 599999776 4799999988753
No 212
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.22 E-value=0.0049 Score=49.42 Aligned_cols=42 Identities=29% Similarity=0.695 Sum_probs=33.0
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh----------hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM----------KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~----------~~Cp~Cr~~i~~ 442 (644)
..|.||.+.. ......||||. .|..|.... ..||.||..+..
T Consensus 20 ~~C~IC~~~~-~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 20 VTCPICLELL-TQPLSLDCGHS-FCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCTTTCSCC-SSCBCCSSSCC-BCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCccc-CCceeCCCCCH-HHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 5699999986 33344599997 699999763 379999999875
No 213
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=95.19 E-value=0.0085 Score=44.95 Aligned_cols=42 Identities=7% Similarity=-0.039 Sum_probs=36.9
Q ss_pred CcccccccCCcCeEEe--cCcccchhhhhcC----CCCccccccccce
Q psy2733 479 NTCTICMERCRNTIFL--CGHGTCDVCAKTL----KFCHMCRKLIEQR 520 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~--CgH~~C~~C~~~~----~~Cp~Cr~~i~~~ 520 (644)
..|+||++...+.|.. |||.++..|++.. ..||+++.+++..
T Consensus 4 ~~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~ 51 (61)
T 2bay_A 4 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIE 51 (61)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGG
T ss_pred EEecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChh
Confidence 5799999999999987 9999999999853 4799999998754
No 214
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=95.18 E-value=0.0081 Score=49.11 Aligned_cols=43 Identities=23% Similarity=0.518 Sum_probs=32.4
Q ss_pred ccccccccccc--ceEEecCCCccccchhhHHHh----hhhhccccceee
Q psy2733 399 VECAVCSELGV--ANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~--~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~ 442 (644)
..|.||++... ..+...||+|. .|..|.... ..||+||..+..
T Consensus 41 ~~C~IC~~~~~~~~~~~~l~C~H~-Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 41 MCCPICCSEYVKGDVATELPCHHY-FHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SEETTTTEECCTTCEEEEETTTEE-EEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCcccChhhcCCCcEEecCCCCh-HHHHHHHHHHHcCCcCcCcCccCCC
Confidence 46999997631 22555699996 799999774 379999988754
No 215
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.12 E-value=0.0086 Score=46.91 Aligned_cols=43 Identities=23% Similarity=0.489 Sum_probs=32.6
Q ss_pred ccccccccccc--ceEEecCCCccccchhhHHHh----hhhhccccceee
Q psy2733 399 VECAVCSELGV--ANVLLKPCNHAVACEECSSRM----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~--~~v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~ 442 (644)
..|.||++... ..+...||+|. .|..|.... ..||+||+.+..
T Consensus 24 ~~C~IC~~~~~~~~~~~~l~C~H~-fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 24 TLCVVCMCDFESRQLLRVLPCNHE-FHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp CEETTTTEECCBTCEEEEETTTEE-EETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCeECCcccCCCCeEEEECCCCH-hHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 56999997532 33456699998 799999765 379999988753
No 216
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=95.08 E-value=0.0053 Score=46.28 Aligned_cols=43 Identities=23% Similarity=0.611 Sum_probs=32.6
Q ss_pred cccccccccccc------eEEecCCCccccchhhHHHhh----hhhccccceee
Q psy2733 399 VECAVCSELGVA------NVLLKPCNHAVACEECSSRMK----KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~------~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~ 442 (644)
..|.||.+.... .+...||||. .|.+|..+.. .||.||+.+..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSCE-EEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCccChhhhCccccCCCEEeCCCCCc-hhHHHHHHHHHcCCCCCCCCccCCc
Confidence 359999986422 2355599999 6999997653 79999998864
No 217
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=95.07 E-value=0.0082 Score=43.74 Aligned_cols=41 Identities=32% Similarity=0.675 Sum_probs=30.7
Q ss_pred cccccccccccc--eEEecC-CCccccchhhHHHh----hhhhccccce
Q psy2733 399 VECAVCSELGVA--NVLLKP-CNHAVACEECSSRM----KKCIMCKTFI 440 (644)
Q Consensus 399 ~~C~iC~d~~~~--~v~~~P-C~h~~~C~~C~~~~----~~Cp~Cr~~i 440 (644)
.+|.||++.... .+...| |||. .|..|..+. ..||.||+.+
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~-f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHG-FHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCE-ECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CcCccCCccccCCCceEECCCCCCc-ccHHHHHHHHHcCCcCcCCCCEe
Confidence 469999986422 244456 9997 699999764 4899999876
No 218
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=95.00 E-value=0.013 Score=53.77 Aligned_cols=43 Identities=21% Similarity=0.590 Sum_probs=34.0
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh-----hhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~ 442 (644)
..|.||.+.....+...||||. .|..|..... .||.||..+..
T Consensus 55 ~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 55 LMCPICLDMLKNTMTTKECLHR-FCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HBCTTTSSBCSSEEEETTTCCE-EEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCcccChHhhCcCEeCCCCCh-hHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 3699999987555555699997 6999997752 59999999853
No 219
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=94.98 E-value=0.0038 Score=49.45 Aligned_cols=42 Identities=29% Similarity=0.670 Sum_probs=32.7
Q ss_pred cccccccccccceEEecCCCccccchhhHHH-----------hhhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSR-----------MKKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~-----------~~~Cp~Cr~~i~~ 442 (644)
..|.||.+.... ....||||. .|..|... ...||.||..+..
T Consensus 13 ~~C~IC~~~~~~-p~~l~CgH~-fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 13 VTCPICLELLTE-PLSLDCGHS-LCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CEETTTTEECSS-CCCCSSSCC-CCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred CCCcCCCcccCC-eeECCCCCH-HHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 469999997633 334599997 69999974 3479999998864
No 220
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=94.78 E-value=0.015 Score=52.44 Aligned_cols=42 Identities=29% Similarity=0.661 Sum_probs=33.3
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhh-----hhhccccceeee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEMR 443 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~~ 443 (644)
.|.||.+....-+ ..||||. .|..|..... .||.||..+...
T Consensus 80 ~C~IC~~~~~~pv-~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 80 MCVCCQELVYQPV-TTECFHN-VCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp BCTTTSSBCSSEE-ECTTSCE-EEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred EeecCChhhcCCE-EcCCCCc-hhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 5999999874444 4599997 6999997763 699999998654
No 221
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=94.69 E-value=0.011 Score=50.28 Aligned_cols=41 Identities=32% Similarity=0.749 Sum_probs=32.0
Q ss_pred ccccccccccceEEecCCCccccchhhHHHhh-------hhhccccceee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMK-------KCIMCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-------~Cp~Cr~~i~~ 442 (644)
.|.||.+.. ......||||. .|..|..... .||.||..+..
T Consensus 23 ~C~IC~~~~-~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 23 ECPICLELI-KEPVSTKCDHI-FCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp SCSSSCCCC-SSCCBCTTSCC-CCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCcccChhh-cCeEECCCCCH-HHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 599999976 33344599997 5999997753 69999998764
No 222
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=94.66 E-value=0.0035 Score=46.15 Aligned_cols=41 Identities=24% Similarity=0.628 Sum_probs=31.9
Q ss_pred ccccccccccceEEecCCCccccchhhHHHh-hhhhccccceee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRM-KKCIMCKTFIEM 442 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-~~Cp~Cr~~i~~ 442 (644)
.|.||.+.. ......||||. .|..|.... ..||.||+.+..
T Consensus 8 ~C~IC~~~~-~~p~~l~CgH~-fC~~Ci~~~~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 8 RCQQCQAEA-KCPKLLPCLHT-LCSGCLEASGMQCPICQAPWPL 49 (56)
T ss_dssp SCSSSCSSC-BCCSCSTTSCC-SBTTTCSSSSSSCSSCCSSSSC
T ss_pred CceEeCCcc-CCeEEcCCCCc-ccHHHHccCCCCCCcCCcEeec
Confidence 599999876 44455699997 699998654 489999988753
No 223
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=94.63 E-value=0.018 Score=44.92 Aligned_cols=40 Identities=25% Similarity=0.717 Sum_probs=31.3
Q ss_pred cccccccccccceEEecC-CCccccchhhHHHhh------hhhccccce
Q psy2733 399 VECAVCSELGVANVLLKP-CNHAVACEECSSRMK------KCIMCKTFI 440 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~P-C~h~~~C~~C~~~~~------~Cp~Cr~~i 440 (644)
..|.||.+....-+. .| |||. .|..|..... .||.||+.+
T Consensus 16 ~~C~IC~~~~~~p~~-~~~CgH~-fC~~Ci~~~~~~~~~~~CP~Cr~~~ 62 (74)
T 2yur_A 16 LLCLICKDIMTDAVV-IPCCGNS-YCDECIRTALLESDEHTCPTCHQND 62 (74)
T ss_dssp GSCSSSCCCCTTCEE-CSSSCCE-ECTTHHHHHHHHSSSSCCSSSCCSS
T ss_pred CCCcCCChHHhCCeE-cCCCCCH-HHHHHHHHHHHhcCCCcCCCCCCcC
Confidence 569999998744444 58 9997 6999997652 699999864
No 224
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=94.42 E-value=0.016 Score=47.37 Aligned_cols=40 Identities=25% Similarity=0.739 Sum_probs=31.4
Q ss_pred cccccccccccceEEecC-CCccccchhhHHHh------hhhhccccce
Q psy2733 399 VECAVCSELGVANVLLKP-CNHAVACEECSSRM------KKCIMCKTFI 440 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~P-C~h~~~C~~C~~~~------~~Cp~Cr~~i 440 (644)
..|.||.+....-+ ..| |||. .|..|.... ..||.||..+
T Consensus 14 ~~C~IC~~~~~~p~-~~~~CgH~-fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 14 LLCLICKDIMTDAV-VIPCCGNS-YCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp TEETTTTEECSSCE-ECTTTCCE-ECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred CCCCCCChhhcCce-ECCCCCCH-HHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 45999999864444 448 9998 699999765 2799999876
No 225
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=94.30 E-value=0.016 Score=47.25 Aligned_cols=46 Identities=24% Similarity=0.430 Sum_probs=35.6
Q ss_pred ccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceeeeeec
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEMRVTT 446 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~~~~~ 446 (644)
.|..|.-...-...+.||.| +.|.+|.... +.||.|+.+|.+.-+.
T Consensus 3 fC~~C~~Pi~iygRmIPCkH-vFCydCa~~~~~~~~k~Cp~C~~~V~rVe~~ 53 (101)
T 3vk6_A 3 FCDKCGLPIKVYGRMIPCKH-VFCYDCAILHEKKGDKMCPGCSDPVQRIEQC 53 (101)
T ss_dssp BCTTTCSBCSEEEEEETTCC-EEEHHHHHHHHHTTCCBCTTTCCBCSEEEEE
T ss_pred ecCccCCCeEEEeeeccccc-cHHHHHHHHHHhccCCCCcCcCCeeeeeEEe
Confidence 36777665545677889999 6899999664 4799999999886653
No 226
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=93.99 E-value=0.027 Score=48.00 Aligned_cols=44 Identities=30% Similarity=0.491 Sum_probs=33.2
Q ss_pred cccccccccccc-----------------eEEecCCCccccchhhHHHhh---------hhhccccceeee
Q psy2733 399 VECAVCSELGVA-----------------NVLLKPCNHAVACEECSSRMK---------KCIMCKTFIEMR 443 (644)
Q Consensus 399 ~~C~iC~d~~~~-----------------~v~~~PC~h~~~C~~C~~~~~---------~Cp~Cr~~i~~~ 443 (644)
..|.||++.... .+...||+|. .|..|..... .||+||..+..+
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~-Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHA-FHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCE-ECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCc-ccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 469999986311 3346699997 6999997643 799999988765
No 227
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=93.84 E-value=0.014 Score=49.87 Aligned_cols=42 Identities=33% Similarity=0.828 Sum_probs=33.2
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~ 442 (644)
..|.||.+....-+.+ ||||. .|..|.... ..||.||..+..
T Consensus 16 ~~C~iC~~~~~~p~~~-~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 16 CQCGICMEILVEPVTL-PCNHT-LCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HBCTTTCSBCSSCEEC-TTSCE-ECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCccCCcccCceeEc-CCCCH-HhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 4599999987444444 99998 699999654 389999999875
No 228
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=93.80 E-value=0.016 Score=49.82 Aligned_cols=41 Identities=29% Similarity=0.614 Sum_probs=32.3
Q ss_pred ccccccccccceEEecCCCccccchhhHHHh--hhhhcccccee
Q psy2733 400 ECAVCSELGVANVLLKPCNHAVACEECSSRM--KKCIMCKTFIE 441 (644)
Q Consensus 400 ~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~--~~Cp~Cr~~i~ 441 (644)
.|.||.+....-+...||||. .|..|.... ..||.||..+.
T Consensus 24 ~C~IC~~~~~~pv~~~~CgH~-fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 24 RCSRCTNILREPVCLGGCEHI-FCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp SCSSSCSCCSSCBCCCSSSCC-BCTTTGGGGTTTBCSSSCCBCS
T ss_pred CCCCCChHhhCccEeCCCCCH-HHHHHHHHHhcCCCcCCCCcCc
Confidence 499999987343444499998 599999877 47999999874
No 229
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=93.56 E-value=0.036 Score=43.55 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=32.5
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~ 442 (644)
..|.||.+....-+. .||||. .|..|.... ..||.||..+..
T Consensus 9 ~~C~IC~~~~~~Pv~-~~CgH~-fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 9 FRCPISLELMKDPVI-VSTGQT-YERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SSCTTTSCCCSSEEE-ETTTEE-EEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred CCCCCccccccCCEE-cCCCCe-ecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 459999997634444 499998 699999764 369999998854
No 230
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=93.48 E-value=0.039 Score=47.34 Aligned_cols=42 Identities=26% Similarity=0.589 Sum_probs=33.0
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~ 442 (644)
..|.||.+....-+. .||||. .|..|.... ..||.||..+..
T Consensus 19 ~~C~IC~~~~~~p~~-~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 19 YECPICLMALREAVQ-TPCGHR-FCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp GBCTTTCSBCSSEEE-CTTSCE-EEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCcCChhhcCeEE-CCcCCh-hhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 469999998744444 599998 699999664 289999988854
No 231
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.34 E-value=0.042 Score=41.15 Aligned_cols=36 Identities=31% Similarity=0.862 Sum_probs=28.2
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh-------hhhcc
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK-------KCIMC 436 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-------~Cp~C 436 (644)
..|.||.+.....+.. ||||. .|..|..+.. .||+|
T Consensus 21 ~~C~IC~~~~~~p~~~-~CgH~-fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 21 VICPICLDILQKPVTI-DCGHN-FCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CBCTTTCSBCSSCEEC-TTSSE-ECHHHHHHHHHHCSSCCCCSCC
T ss_pred CCCCcCCchhCCeEEe-CCCCc-chHHHHHHHHHcCCCCCcCcCC
Confidence 5699999987444444 99999 6999997753 58887
No 232
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.22 E-value=0.028 Score=41.19 Aligned_cols=36 Identities=31% Similarity=0.802 Sum_probs=27.9
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-------hhhhcc
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-------KKCIMC 436 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-------~~Cp~C 436 (644)
..|.||.+.. ......||||. .|..|.... ..||+|
T Consensus 16 ~~C~IC~~~~-~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 16 ASCSVCLEYL-KEPVIIECGHN-FCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CBCSSSCCBC-SSCCCCSSCCC-CCHHHHHHHTTSSCCSCCCSCC
T ss_pred CCCccCCccc-CccEeCCCCCc-cCHHHHHHHHHhcCCCCCCCCC
Confidence 5699999986 33344599998 699999876 368877
No 233
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=92.55 E-value=0.067 Score=45.64 Aligned_cols=42 Identities=24% Similarity=0.558 Sum_probs=32.8
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~ 442 (644)
..|.||.+.....+. .||||. .|..|.... ..||.||..+..
T Consensus 24 ~~C~IC~~~~~~p~~-~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 24 ISCQICEHILADPVE-TSCKHL-FCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp TBCTTTCSBCSSEEE-CTTSCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCcHhcCcEE-cCCCCc-ccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 359999998744444 599998 599999664 379999998864
No 234
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=91.98 E-value=0.047 Score=48.52 Aligned_cols=40 Identities=20% Similarity=0.517 Sum_probs=32.3
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccce
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFI 440 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i 440 (644)
..|.||.+....-+. .||||. .|..|.... ..||.||..+
T Consensus 32 ~~C~IC~~~~~~pv~-~~CgH~-FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 32 YLCSACRNVLRRPFQ-AQCGHR-YCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp GBCTTTCSBCSSEEE-CTTSCE-EEHHHHHHHGGGSCEECHHHHHTT
T ss_pred cCCCCCChhhcCcEE-CCCCCc-cCHHHHHHHHhcCCCCCCCCCCcc
Confidence 469999998644444 599998 699999886 3799999976
No 235
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.22 E-value=0.13 Score=39.94 Aligned_cols=43 Identities=21% Similarity=0.396 Sum_probs=33.2
Q ss_pred CcccccccCCcCeE-Ee-cCcccchhhhhc----C--CCCccccccccceE
Q psy2733 479 NTCTICMERCRNTI-FL-CGHGTCDVCAKT----L--KFCHMCRKLIEQRI 521 (644)
Q Consensus 479 ~~C~iC~~~~~~~~-~~-CgH~~C~~C~~~----~--~~Cp~Cr~~i~~~~ 521 (644)
..|.||++....-. .. |+|.+=..|+.+ . ..||+||.+....+
T Consensus 16 ~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~~ 66 (74)
T 2ct0_A 16 KICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEI 66 (74)
T ss_dssp CBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSCC
T ss_pred CcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCCC
Confidence 56999999887544 33 999999999872 2 68999998876543
No 236
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.93 E-value=0.21 Score=39.56 Aligned_cols=31 Identities=26% Similarity=0.558 Sum_probs=23.5
Q ss_pred EEecCCCccccchhhHHHh----hhhhccccceeee
Q psy2733 412 VLLKPCNHAVACEECSSRM----KKCIMCKTFIEMR 443 (644)
Q Consensus 412 v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i~~~ 443 (644)
+..-+|+|. .+..|..+- ..||+||+.+...
T Consensus 43 ~~~~~C~H~-FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 43 VVWGECNHS-FHNCCMSLWVKQNNRCPLCQQDWVVQ 77 (81)
T ss_dssp EEEETTSCE-EEHHHHHHHTTTCCBCTTTCCBCCEE
T ss_pred EEeCCCCCc-cChHHHHHHHHhCCCCCCcCCCcchh
Confidence 344369998 699999764 4799999987643
No 237
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=89.87 E-value=0.066 Score=53.96 Aligned_cols=45 Identities=22% Similarity=0.485 Sum_probs=32.6
Q ss_pred hcCcccccccCCcC------eEE--e-cCcccchhhhhc----C-----------CCCccccccccceE
Q psy2733 477 EMNTCTICMERCRN------TIF--L-CGHGTCDVCAKT----L-----------KFCHMCRKLIEQRI 521 (644)
Q Consensus 477 ~~~~C~iC~~~~~~------~~~--~-CgH~~C~~C~~~----~-----------~~Cp~Cr~~i~~~~ 521 (644)
....|.||++...+ .+. . |||.|-..|... . ..||+||.+|+...
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~sf 375 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTSF 375 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGGG
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCccH
Confidence 44689999976554 222 3 999999999752 1 36999999998543
No 238
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=89.45 E-value=0.18 Score=46.10 Aligned_cols=42 Identities=26% Similarity=0.589 Sum_probs=33.3
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh-----hhhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM-----KKCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~-----~~Cp~Cr~~i~~ 442 (644)
..|.||.+....-+. .||||. .|..|.... ..||.||..+..
T Consensus 19 ~~C~IC~~~~~~pv~-~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 19 YECPICLMALREAVQ-TPCGHR-FCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp GBCTTTCSBCSSEEE-CTTSCE-EEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCChhhcCcEE-CCCCCH-HHHHHHHHHHHhCCCCCCCCccCcch
Confidence 469999998744444 599998 599999775 289999988765
No 239
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=87.60 E-value=0.33 Score=38.78 Aligned_cols=42 Identities=7% Similarity=-0.014 Sum_probs=32.7
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh----hhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~ 442 (644)
..|.||.+.. ..-+..||||. .|..|..... .||+|+..+..
T Consensus 15 ~~CpI~~~~m-~dPV~~~cGht-f~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 15 FRDPLMDTLM-TDPVRLPSGTV-MDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp TBCTTTCSBC-SSEEECTTSCE-EEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred eECcccCchh-cCCeECCCCCE-ECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 3599999987 44455599997 7999987653 79999987754
No 240
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=87.16 E-value=0.3 Score=40.41 Aligned_cols=42 Identities=7% Similarity=-0.051 Sum_probs=32.8
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh----hhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~ 442 (644)
..|.||.+.. ..-+..||||. .|..|..... .||+|+.++..
T Consensus 30 ~~CpI~~~~m-~dPV~~~cGht-f~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 30 FRDPLMDTLM-TDPVRLPSGTI-MDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp TBCTTTCSBC-SSEEEETTTEE-EEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred hCCcCccCcc-cCCeECCCCCE-EchHHHHHHHHcCCCCCCCCCCCCh
Confidence 3599999987 44455599998 7999997763 79999988753
No 241
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=86.47 E-value=0.38 Score=39.62 Aligned_cols=42 Identities=12% Similarity=0.065 Sum_probs=32.5
Q ss_pred cccccccccccceEEecCCC-ccccchhhHHHhh----hhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCN-HAVACEECSSRMK----KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~-h~~~C~~C~~~~~----~Cp~Cr~~i~~ 442 (644)
..|.||.+.. ..-+..||| |. .|..|..... .||+|+..+..
T Consensus 23 ~~CpI~~~~m-~dPV~~~cG~ht-f~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 23 FLDPIMSTLM-CDPVVLPSSRVT-VDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp TBCTTTCSBC-SSEEECTTTCCE-EEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred cCCcCccccc-cCCeECCCCCeE-ECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 3599999987 444556999 75 6999997763 79999988753
No 242
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=86.34 E-value=0.3 Score=39.77 Aligned_cols=40 Identities=18% Similarity=0.413 Sum_probs=29.2
Q ss_pred cccccccccccc--eEEecCCCccccchhhHHHh------------hhhhc--cccc
Q psy2733 399 VECAVCSELGVA--NVLLKPCNHAVACEECSSRM------------KKCIM--CKTF 439 (644)
Q Consensus 399 ~~C~iC~d~~~~--~v~~~PC~h~~~C~~C~~~~------------~~Cp~--Cr~~ 439 (644)
..|.||++.... .+.+.||||. .|.+|.... .+||. |+..
T Consensus 6 ~~C~IC~~~~~~~~~~~l~~CgH~-FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 6 SGCKLCLGEYPVEQMTTIAQCQCI-FCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp CCCSSSCCCCBGGGEEEETTTTEE-EEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred cCCcccCcccccccceEcCCCCCc-ccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 359999986322 3344589998 699998553 26999 9977
No 243
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=84.77 E-value=0.39 Score=35.56 Aligned_cols=43 Identities=30% Similarity=0.652 Sum_probs=30.2
Q ss_pred hhcCcccccccCCcCeEEe-cC--c---ccchhhhhc------CCCCcccccccc
Q psy2733 476 EEMNTCTICMERCRNTIFL-CG--H---GTCDVCAKT------LKFCHMCRKLIE 518 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~-Cg--H---~~C~~C~~~------~~~Cp~Cr~~i~ 518 (644)
+++..|.||++...+..+. |. | .+=..|..+ -..||+|+.+..
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 4456899999876554445 65 4 457778773 358999998865
No 244
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=84.69 E-value=0.43 Score=47.22 Aligned_cols=42 Identities=7% Similarity=-0.067 Sum_probs=32.2
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh-----hhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~ 442 (644)
..|.||.+.. ..-+..||||. .|..|..... .||+|+.++..
T Consensus 209 ~~c~i~~~~~-~dPv~~~~gh~-f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 209 LCGKISFELM-REPCITPSGIT-YDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp TBCTTTCSBC-SSEEECSSCCE-EETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cCCcCcCCHh-cCCeECCCCCE-ECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 3599999987 44455699997 6999987642 39999988853
No 245
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=84.04 E-value=0.58 Score=39.11 Aligned_cols=28 Identities=32% Similarity=0.406 Sum_probs=22.6
Q ss_pred EEecCCCccccchhhHHHh----hhhhccccce
Q psy2733 412 VLLKPCNHAVACEECSSRM----KKCIMCKTFI 440 (644)
Q Consensus 412 v~~~PC~h~~~C~~C~~~~----~~Cp~Cr~~i 440 (644)
+...||+|. .+..|...- ..||+||+..
T Consensus 68 ~~~~~C~H~-FH~~Ci~~Wl~~~~~CP~Cr~~~ 99 (106)
T 3dpl_R 68 VAWGVCNHA-FHFHCISRWLKTRQVCPLDNREW 99 (106)
T ss_dssp EEEETTSCE-EEHHHHHHHHTTCSBCSSSCSBC
T ss_pred EeecccCcE-ECHHHHHHHHHcCCcCcCCCCcc
Confidence 455699998 699999773 3799999984
No 246
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=83.84 E-value=0.33 Score=38.83 Aligned_cols=47 Identities=19% Similarity=0.405 Sum_probs=37.8
Q ss_pred cCcccccccCCcCeEEecCcccchhhhhcC----CCCccccccccceEEEE
Q psy2733 478 MNTCTICMERCRNTIFLCGHGTCDVCAKTL----KFCHMCRKLIEQRINIS 524 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~CgH~~C~~C~~~~----~~Cp~Cr~~i~~~~~~~ 524 (644)
...|..|+-..++.|--.-|..|..|...| ..||+|..++-.++++-
T Consensus 28 ~~nCKsCWf~~k~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~~~ 78 (99)
T 2ko5_A 28 PQFCKSCWFENKGLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRPS 78 (99)
T ss_dssp CCCCCSSCSCCSSEEECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSCTT
T ss_pred cccChhhccccCCeeeecchhhHHHHHHHHHhhccCCcccCCcCCcceecC
Confidence 368999999888554435689999999965 58999999999888543
No 247
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=82.46 E-value=0.53 Score=36.25 Aligned_cols=28 Identities=43% Similarity=0.903 Sum_probs=25.4
Q ss_pred cCcccccccCCcCeEEe-c----Ccccchhhhh
Q psy2733 478 MNTCTICMERCRNTIFL-C----GHGTCDVCAK 505 (644)
Q Consensus 478 ~~~C~iC~~~~~~~~~~-C----gH~~C~~C~~ 505 (644)
...|.+|.++..+..|. | +|.||..|.+
T Consensus 15 ~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr 47 (93)
T 2cs3_A 15 PLCCTICHERLEDTHFVQCPSVPSHKFCFPCSR 47 (93)
T ss_dssp SCCCSSSCSCCSSTTSEECSSCSSCEECHHHHH
T ss_pred eeEeecchhhhccCceeeCCCccCCeeeccccH
Confidence 35799999999999999 9 5799999988
No 248
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=80.61 E-value=0.69 Score=41.33 Aligned_cols=57 Identities=23% Similarity=0.481 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHhhhhhh------------hcCcccccccC-----CcCeEEe-cCcccchhhhhc-----CCCCcccccc
Q psy2733 460 SKIERVNYLESKISEIE------------EMNTCTICMER-----CRNTIFL-CGHGTCDVCAKT-----LKFCHMCRKL 516 (644)
Q Consensus 460 ~~~~~~~~l~~~~~~~~------------~~~~C~iC~~~-----~~~~~~~-CgH~~C~~C~~~-----~~~Cp~Cr~~ 516 (644)
...+.+.+|.++++++. .+..|.+|... ....+.. |.|.+|..|... ...|-+|+..
T Consensus 38 ~EeeRi~kLk~~l~~~~~k~~~~~~~~~~~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 38 REEERLQGLKGKIQKESSKRELLSDTAHLNETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHPEEQGWLCDPCHLA 117 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTGGGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCSSSSSCEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccccCCCccchhhcCccccccCCCCcCCCCCchhhcccccccCCCCcEeeHHHHHH
Confidence 33466666766655541 45899999886 3455666 999999999953 3468888765
No 249
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=78.81 E-value=0.67 Score=38.14 Aligned_cols=29 Identities=24% Similarity=0.684 Sum_probs=22.6
Q ss_pred cCcccccccC-CcCeEE--e-cCcccchhhhhc
Q psy2733 478 MNTCTICMER-CRNTIF--L-CGHGTCDVCAKT 506 (644)
Q Consensus 478 ~~~C~iC~~~-~~~~~~--~-CgH~~C~~C~~~ 506 (644)
+..|.||.+. ....+. + |+|.+|..|...
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCCCcCCCCCCCCCceEECCcCChHHhHHHCHH
Confidence 4679999964 444444 6 999999999986
No 250
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=76.93 E-value=0.49 Score=40.27 Aligned_cols=26 Identities=31% Similarity=0.400 Sum_probs=0.0
Q ss_pred ecCCCccccchhhHHH----hhhhhccccce
Q psy2733 414 LKPCNHAVACEECSSR----MKKCIMCKTFI 440 (644)
Q Consensus 414 ~~PC~h~~~C~~C~~~----~~~Cp~Cr~~i 440 (644)
..||+|. .+..|... -..||+||+..
T Consensus 81 ~~~C~H~-FH~~CI~~Wl~~~~~CP~Cr~~~ 110 (117)
T 4a0k_B 81 WGVCNHA-FHFHCISRWLKTRQVCPLDNREW 110 (117)
T ss_dssp -------------------------------
T ss_pred cCCcCce-EcHHHHHHHHHcCCcCCCCCCee
Confidence 3489998 68999966 34899999874
No 251
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=76.69 E-value=0.62 Score=40.65 Aligned_cols=58 Identities=21% Similarity=0.579 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHhhhhhh------hcCcccccccCC-----cCeEEe-cCcccchhhhhcC--------CCCcccccc
Q psy2733 459 KSKIERVNYLESKISEIE------EMNTCTICMERC-----RNTIFL-CGHGTCDVCAKTL--------KFCHMCRKL 516 (644)
Q Consensus 459 ~~~~~~~~~l~~~~~~~~------~~~~C~iC~~~~-----~~~~~~-CgH~~C~~C~~~~--------~~Cp~Cr~~ 516 (644)
....+.+.+|.+++++++ .+..|.+|.... ...+.. |.|.+|..|.... ..|-+|++.
T Consensus 30 ~~E~~ri~kL~~~l~~~k~~~~~~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 30 TMEQERIGRLVDRLETMRKNVAGDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHhccCCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 344566677777766665 347899998877 234555 8898899998843 358888865
No 252
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=76.07 E-value=1.5 Score=40.29 Aligned_cols=42 Identities=7% Similarity=-0.078 Sum_probs=31.5
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh-----hhhccccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK-----KCIMCKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~-----~Cp~Cr~~i~~ 442 (644)
..|.||.+.. ..-+..||||. .|..|..... .||+|+.++..
T Consensus 107 f~CPI~~elm-~DPV~~~~Ght-fer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 107 LCGKISFELM-REPCITPSGIT-YDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp GBCTTTCSBC-SSEEECTTSCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred hcccCccccC-CCCeECCCCCE-ECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 3599999987 34444599996 6999986642 49999987754
No 253
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=73.49 E-value=1.8 Score=42.14 Aligned_cols=43 Identities=19% Similarity=0.438 Sum_probs=33.9
Q ss_pred cccccccccccceEEecCCCccccchhhHHHhh------hhhc--cccceee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRMK------KCIM--CKTFIEM 442 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~------~Cp~--Cr~~i~~ 442 (644)
..|.||.+....-|....|||. .|..|..... .||+ |+..+..
T Consensus 182 l~CPIcl~~f~DPVts~~CGHs-FcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 182 LTCPITCKPYEAPLISRKCNHV-FDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp SBCTTTSSBCSSEEEESSSCCE-EEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred eECcCccCcccCCeeeCCCCCc-ccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 4599999987455655699996 7999997763 6999 9987754
No 254
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.73 E-value=2.2 Score=34.53 Aligned_cols=39 Identities=23% Similarity=0.423 Sum_probs=28.7
Q ss_pred cccccccccccceEEecC-CCccccchhhHHHhh----------hhhc--cccc
Q psy2733 399 VECAVCSELGVANVLLKP-CNHAVACEECSSRMK----------KCIM--CKTF 439 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~P-C~h~~~C~~C~~~~~----------~Cp~--Cr~~ 439 (644)
..|.||.+.. ..-+..| |||. .|..|..... .||+ |+..
T Consensus 8 ~~CPI~~~~~-~dPV~~~~cGh~-f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 8 FTCPITKEEM-KKPVKNKVCGHT-YEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp CBCTTTCSBC-SSEEEESSSCCE-EEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred eECcCcCchh-cCCEEcCCCCCe-ecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 3599999987 4444445 9997 6999986542 7999 8855
No 255
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.65 E-value=6.4 Score=30.78 Aligned_cols=45 Identities=27% Similarity=0.605 Sum_probs=30.9
Q ss_pred ccccccccccc-ceEEecCCC-----ccccchhhHHHh------hhhhccccceeeee
Q psy2733 399 VECAVCSELGV-ANVLLKPCN-----HAVACEECSSRM------KKCIMCKTFIEMRV 444 (644)
Q Consensus 399 ~~C~iC~d~~~-~~v~~~PC~-----h~~~C~~C~~~~------~~Cp~Cr~~i~~~~ 444 (644)
..|.||++... ...+..||. |. +-..|..+= ..||+||..+.-..
T Consensus 16 ~~C~IC~~~~~~~~~l~~pC~C~Gs~h~-fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 16 DICRICHCEGDDESPLITPCHCTGSLHF-VHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp CCCSSSCCCCCSSSCEECSSSCCSSSCC-EETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCeEcCccccCCCeeEeccccCCcCCe-eCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 56999996421 223456996 77 478898653 27999999885433
No 256
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=55.11 E-value=11 Score=32.38 Aligned_cols=84 Identities=15% Similarity=0.386 Sum_probs=54.9
Q ss_pred cccccccccc----ceEEecCCCccccchhhHHHhhhhhccccceeeeeecCCCccCCCcccchhHHHHHHHHHHhhhhh
Q psy2733 400 ECAVCSELGV----ANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISEI 475 (644)
Q Consensus 400 ~C~iC~d~~~----~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~ 475 (644)
.|..|..... ..+..-|=-....|..|...+....+-+ .+-
T Consensus 10 ~Ct~Cg~~~~~~~~~~~~~HPll~v~~C~~C~~~y~~~~~~~-----------------------------------d~D 54 (129)
T 3ql9_A 10 SCTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISR-----------------------------------DSD 54 (129)
T ss_dssp BCTTTCCBCCCCBTTTEEECTTTCCEEEHHHHHHHHHSCCCB-----------------------------------CTT
T ss_pred EeccCCCCCcccCCCccccCCCcCceeCHhHHhhhhcccccc-----------------------------------CCC
Confidence 4888876541 3467778888889999997776665411 112
Q ss_pred hhcCcccccccCCcCeEEe-cCcccchhhhhc---------C------CCCcccccccc
Q psy2733 476 EEMNTCTICMERCRNTIFL-CGHGTCDVCAKT---------L------KFCHMCRKLIE 518 (644)
Q Consensus 476 ~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~---------~------~~Cp~Cr~~i~ 518 (644)
..+..|.||-+.-.-+--- |-..||..|..+ + ..|++|+.+.-
T Consensus 55 g~~~~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~pl 113 (129)
T 3ql9_A 55 GMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEPL 113 (129)
T ss_dssp SCBSSCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGGG
T ss_pred CCCCcCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHHH
Confidence 3335699999875422222 556789999873 1 47999986543
No 257
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.80 E-value=9.8 Score=29.26 Aligned_cols=45 Identities=16% Similarity=0.506 Sum_probs=32.5
Q ss_pred cccccccccccceEEecCCCccccchhhHHHh------hhhhccccceeeee
Q psy2733 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM------KKCIMCKTFIEMRV 444 (644)
Q Consensus 399 ~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~------~~Cp~Cr~~i~~~~ 444 (644)
.+|.||.+.......+..|+|..= ..|..+- ..||.|+......+
T Consensus 16 ~~C~IC~~~i~~g~~C~~C~h~fH-~~Ci~kWl~~~~~~~CP~Cr~~w~~~~ 66 (74)
T 2ct0_A 16 KICNICHSLLIQGQSCETCGIRMH-LPCVAKYFQSNAEPRCPHCNDYWPHEI 66 (74)
T ss_dssp CBCSSSCCBCSSSEECSSSCCEEC-HHHHHHHSTTCSSCCCTTTCSCCCSCC
T ss_pred CcCcchhhHcccCCccCCCCchhh-HHHHHHHHHhcCCCCCCCCcCcCCCCC
Confidence 579999988766667777887642 5677642 47999998876444
No 258
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=47.16 E-value=11 Score=27.62 Aligned_cols=35 Identities=23% Similarity=0.615 Sum_probs=27.0
Q ss_pred CcccccccCCcCeE-Ee---cCcccchhhhh----cCCCCccc
Q psy2733 479 NTCTICMERCRNTI-FL---CGHGTCDVCAK----TLKFCHMC 513 (644)
Q Consensus 479 ~~C~iC~~~~~~~~-~~---CgH~~C~~C~~----~~~~Cp~C 513 (644)
..|.-|.....+.. +. |++.+|.+|.. .+..||-|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 45999988875543 54 78899999987 56789988
No 259
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=45.60 E-value=13 Score=29.67 Aligned_cols=54 Identities=20% Similarity=0.460 Sum_probs=39.6
Q ss_pred CcccccccccccccceEEecCCCccccchhhHHHhh----hhhccccceeeeeecCCCccC
Q psy2733 396 NVPVECAVCSELGVANVLLKPCNHAVACEECSSRMK----KCIMCKTFIEMRVTTDGRMVP 452 (644)
Q Consensus 396 ~~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~----~Cp~Cr~~i~~~~~~~g~~~~ 452 (644)
.-+..|..|+-.. .. +. -|..--.|..|.+.+- .||+|+.++-.++.+..++++
T Consensus 26 ~G~~nCKsCWf~~-k~-LV-~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~~~~~PSA 83 (99)
T 2ko5_A 26 LGPQFCKSCWFEN-KG-LV-ECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRPSAAPTA 83 (99)
T ss_dssp SCCCCCCSSCSCC-SS-EE-ECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSCTTTSCCC
T ss_pred cCcccChhhcccc-CC-ee-eecchhhHHHHHHHHHhhccCCcccCCcCCcceecCcCCCC
Confidence 3356799999765 32 22 4554446999999883 899999999999988766543
No 260
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=45.58 E-value=26 Score=35.91 Aligned_cols=88 Identities=19% Similarity=0.389 Sum_probs=59.4
Q ss_pred CCCCcccccccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeecCCCccCCCcccchhHHHHHHHHHHhh
Q psy2733 393 SCQNVPVECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKI 472 (644)
Q Consensus 393 ~~~~~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 472 (644)
....+...|..|.... .+..-|=-....|..|...+..+.+=+
T Consensus 45 ~~~~~e~~C~~CG~~~--~~~~HPl~~v~lC~~Ck~~y~~~~f~~----------------------------------- 87 (386)
T 2pv0_B 45 NQRNIEDICICCGSLQ--VHTQHPLFEGGICAPCKDKFLDALFLY----------------------------------- 87 (386)
T ss_dssp SCCCGGGSBTTTCCSC--CCSBCSSBSSBCCHHHHHHHHTTTTCB-----------------------------------
T ss_pred ccCcccceeCCCCCcC--ccccCCCcCcchhhHHHHHHhccCccc-----------------------------------
Confidence 3344556799998763 345667777889999999988887722
Q ss_pred hhhhhcCcccccccCCcCeEEe---cCcccchhhhhcC--------------CCCccccccc
Q psy2733 473 SEIEEMNTCTICMERCRNTIFL---CGHGTCDVCAKTL--------------KFCHMCRKLI 517 (644)
Q Consensus 473 ~~~~~~~~C~iC~~~~~~~~~~---CgH~~C~~C~~~~--------------~~Cp~Cr~~i 517 (644)
.+-.-+..|.+|-+...-+..- |..++|..|+.+. ..|-+|....
T Consensus 88 D~DG~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 88 DDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp CSSSSBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CCCCCcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 1123345799999876322221 4456799998832 3799999775
No 261
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=45.52 E-value=20 Score=34.41 Aligned_cols=59 Identities=17% Similarity=0.364 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHhhhhhhhcCcccccccCCcCeEEe--cCcccchhhhhc------CCCCccccccccce
Q psy2733 460 SKIERVNYLESKISEIEEMNTCTICMERCRNTIFL--CGHGTCDVCAKT------LKFCHMCRKLIEQR 520 (644)
Q Consensus 460 ~~~~~~~~l~~~~~~~~~~~~C~iC~~~~~~~~~~--CgH~~C~~C~~~------~~~Cp~Cr~~i~~~ 520 (644)
...|....+.+...+ .-..|.||.+....-..- |+|.+=..|... -..||.|+.+....
T Consensus 164 ~l~El~~~l~~~~~~--~i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 164 AILEMEQYIRETYPD--AVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp HHHHHHHHHHHHCTT--TCCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSC
T ss_pred cHHHHHHHHHHhcCC--CCCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 344555666655442 346799999988865443 888777788763 24899999987653
No 262
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=42.36 E-value=35 Score=29.78 Aligned_cols=83 Identities=17% Similarity=0.408 Sum_probs=54.3
Q ss_pred ccccccccccc----ceEEecCCCccccchhhHHHhhhhhccccceeeeeecCCCccCCCcccchhHHHHHHHHHHhhhh
Q psy2733 399 VECAVCSELGV----ANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISE 474 (644)
Q Consensus 399 ~~C~iC~d~~~----~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ 474 (644)
..|..|..... ..+..-|=.+...|..|...+....+=+ .+
T Consensus 15 i~Ct~Cg~~~~~~q~~~~~~HPll~v~~C~~C~~~y~~~~~~~-----------------------------------d~ 59 (142)
T 2lbm_A 15 VSCTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISR-----------------------------------DS 59 (142)
T ss_dssp CBCTTTCSBSTTTCSSSEEEETTTTEEEEHHHHHHHHHSCCCB-----------------------------------CT
T ss_pred CEecCCCCccccccccchhcCCCccccccHHHHHHHhcCCcee-----------------------------------cC
Confidence 45888877541 2466778888889999997766554311 11
Q ss_pred hhhcCcccccccCCcCeEEe-cCcccchhhhhc---------------CCCCcccccc
Q psy2733 475 IEEMNTCTICMERCRNTIFL-CGHGTCDVCAKT---------------LKFCHMCRKL 516 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~-CgH~~C~~C~~~---------------~~~Cp~Cr~~ 516 (644)
-..+..|.+|.+.-.-+..- |-..||..|... -..||+|+..
T Consensus 60 Dg~~d~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 60 DGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TSCBCSCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCeecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 12345799999877533222 555789999871 1369999854
No 263
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=36.68 E-value=24 Score=27.90 Aligned_cols=42 Identities=21% Similarity=0.661 Sum_probs=30.2
Q ss_pred cCcccccccCCc----CeEEe-cCc---ccchhhhh-----cCCCCccccccccc
Q psy2733 478 MNTCTICMERCR----NTIFL-CGH---GTCDVCAK-----TLKFCHMCRKLIEQ 519 (644)
Q Consensus 478 ~~~C~iC~~~~~----~~~~~-CgH---~~C~~C~~-----~~~~Cp~Cr~~i~~ 519 (644)
...|.||=|..- --+|. |.. -+|..|.+ .-+.||-|..+-.+
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr 70 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcccc
Confidence 368999988732 22566 665 34999987 34689999988773
No 264
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=31.69 E-value=32 Score=31.02 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=21.1
Q ss_pred cCCcCeEEe-cCcccchhhhhcCCCCccccccccceE
Q psy2733 486 ERCRNTIFL-CGHGTCDVCAKTLKFCHMCRKLIEQRI 521 (644)
Q Consensus 486 ~~~~~~~~~-CgH~~C~~C~~~~~~Cp~Cr~~i~~~~ 521 (644)
+.....+.. |||++= ......||+|..+-....
T Consensus 134 ~~~~~~~C~~CG~i~~---~~~p~~CP~Cg~~~~~F~ 167 (170)
T 3pwf_A 134 EIKKVYICPICGYTAV---DEAPEYCPVCGAPKEKFV 167 (170)
T ss_dssp CCSCEEECTTTCCEEE---SCCCSBCTTTCCBGGGCE
T ss_pred CCCCeeEeCCCCCeeC---CCCCCCCCCCCCCHHHce
Confidence 334445566 999543 233459999998876544
No 265
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=30.08 E-value=16 Score=36.84 Aligned_cols=44 Identities=18% Similarity=0.492 Sum_probs=28.4
Q ss_pred cccccccccccc-----ceEEec--CCCccccchhhHHH----h-----------hhhhccccceee
Q psy2733 398 PVECAVCSELGV-----ANVLLK--PCNHAVACEECSSR----M-----------KKCIMCKTFIEM 442 (644)
Q Consensus 398 ~~~C~iC~d~~~-----~~v~~~--PC~h~~~C~~C~~~----~-----------~~Cp~Cr~~i~~ 442 (644)
..+|.||.+... ....|. +|+|. .=..|..+ . ..||+||++|+.
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~-FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLK-CHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCC-BCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred CccCcccceeecCCCCCccccccCCccCCc-cchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 357999997432 223343 68876 35677744 1 259999998864
No 266
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=27.74 E-value=60 Score=33.05 Aligned_cols=41 Identities=22% Similarity=0.297 Sum_probs=31.7
Q ss_pred CcccccccCCcCeEEe--cCcccchhhhh--------cCCCCccccccccc
Q psy2733 479 NTCTICMERCRNTIFL--CGHGTCDVCAK--------TLKFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~--CgH~~C~~C~~--------~~~~Cp~Cr~~i~~ 519 (644)
..|++=+.+....+=. |.|.-|.+-.. .-.+||+|.+.+.-
T Consensus 250 L~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~ 300 (371)
T 3i2d_A 250 LQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIAL 300 (371)
T ss_dssp SBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCG
T ss_pred ecCCCccccccccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCH
Confidence 7899999998887776 99976665433 45699999988753
No 267
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=26.64 E-value=1.3e+02 Score=26.70 Aligned_cols=84 Identities=25% Similarity=0.521 Sum_probs=58.9
Q ss_pred CCcccccccccccccceEEecCCCccccchhhHHHhhhhhccccceeeeeecCCCccCCCcccchhHHHHHHHHHHhhhh
Q psy2733 395 QNVPVECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISE 474 (644)
Q Consensus 395 ~~~~~~C~iC~d~~~~~v~~~PC~h~~~C~~C~~~~~~Cp~Cr~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ 474 (644)
..+...|..|.... .+..-|=.....|..|...+..+++=+ .+
T Consensus 33 ~~~e~~Ct~CG~~~--~~~~HPlf~v~lC~~Ck~~y~e~~f~~-----------------------------------De 75 (159)
T 3a1b_A 33 RNIEDICISCGSLN--VTLEHPLFVGGMCQNCKNCFLECAYQY-----------------------------------DD 75 (159)
T ss_dssp SCGGGSBTTTCCSC--CCEECSSBSSEECHHHHHHHHHHTTCB-----------------------------------CT
T ss_pred CCccCcccCCCCcC--ccccCCCccchhhHHHHHHHhhccccc-----------------------------------CC
Confidence 33456699998753 346668888889999998888887722 12
Q ss_pred hhhcCcccccccCCcCeEEecCc-----ccchhhhhcC--------------CCCccccccc
Q psy2733 475 IEEMNTCTICMERCRNTIFLCGH-----GTCDVCAKTL--------------KFCHMCRKLI 517 (644)
Q Consensus 475 ~~~~~~C~iC~~~~~~~~~~CgH-----~~C~~C~~~~--------------~~Cp~Cr~~i 517 (644)
-.-+..|.||-+.- .++.|++ .||..|..++ ..|-+|....
T Consensus 76 DG~~~yC~wC~~Gg--~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 76 DGYQSYCTICCGGR--EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp TSSBSSCTTTSCCS--EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCCcceeeEecCCC--eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 23346899999864 4444773 5699998832 2699998765
No 268
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=25.38 E-value=13 Score=29.07 Aligned_cols=41 Identities=20% Similarity=0.493 Sum_probs=28.5
Q ss_pred cccccccCCcCeEEe--cCc--ccchhhhhcCCCCccccccccce
Q psy2733 480 TCTICMERCRNTIFL--CGH--GTCDVCAKTLKFCHMCRKLIEQR 520 (644)
Q Consensus 480 ~C~iC~~~~~~~~~~--CgH--~~C~~C~~~~~~Cp~Cr~~i~~~ 520 (644)
.|.-|-.......|- ||. ..|..|...-.-|+.|..-|+++
T Consensus 20 ~C~~C~~~~~~~afCPeCgq~Le~lkACGA~~yFC~~C~~LiSkk 64 (81)
T 2jrp_A 20 HCETCAKDFSLQALCPDCRQPLQVLKACGAVDYFCQNGHGLISKK 64 (81)
T ss_dssp ECTTTCCEEEEEEECSSSCSCCCEEEETTEEEECCTTTTCCCCTT
T ss_pred ECccccccCCCcccCcchhhHHHHHHhcCCcCeeeccCCCEeecc
Confidence 477777776666665 777 33777766666788888888774
No 269
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=23.02 E-value=40 Score=30.54 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=31.4
Q ss_pred CcccccccCCcCeEEe-cCcccchhhhhcC--CCCccccccccc
Q psy2733 479 NTCTICMERCRNTIFL-CGHGTCDVCAKTL--KFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~-CgH~~C~~C~~~~--~~Cp~Cr~~i~~ 519 (644)
..|..|........|. =|..+|..|..+. .+|..|..+|..
T Consensus 88 F~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~~kC~~C~~~I~~ 131 (182)
T 2jtn_A 88 LKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPP 131 (182)
T ss_dssp TSCTTTCCCCSSCCEEETTEEECHHHHHHTTSCCCTTTCCCCCS
T ss_pred CccCCCCCccCCCceeECCEeeecCccccccccccccCCCccCC
Confidence 5677887776665566 5667799998864 699999999874
No 270
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=20.93 E-value=97 Score=31.42 Aligned_cols=41 Identities=22% Similarity=0.288 Sum_probs=32.0
Q ss_pred CcccccccCCcCeEEe--cCcccchhhhh--------cCCCCccccccccc
Q psy2733 479 NTCTICMERCRNTIFL--CGHGTCDVCAK--------TLKFCHMCRKLIEQ 519 (644)
Q Consensus 479 ~~C~iC~~~~~~~~~~--CgH~~C~~C~~--------~~~~Cp~Cr~~i~~ 519 (644)
..|++=+.+....+=. |.|.-|.+-.. .-.+||+|.+.+.-
T Consensus 216 L~CPlS~~ri~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~ 266 (360)
T 4fo9_A 216 LMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAY 266 (360)
T ss_dssp SBCTTTCSBCSSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCG
T ss_pred eeCCCccceeccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCH
Confidence 6799999998887776 99976665443 44699999998863
No 271
>3luu_A Uncharacterized protein; AFE_2189, PFAM DUF971 family, structural genomics, joint CEN structural genomics, JCSG; HET: MSE; 1.93A {Acidithiobacillus ferrooxidans}
Probab=20.79 E-value=23 Score=28.82 Aligned_cols=23 Identities=35% Similarity=0.573 Sum_probs=17.7
Q ss_pred EEEEEEeeCce-eehhHHHHhhhc
Q psy2733 544 IRIQILLSDGH-LGFVMQSYQRNH 566 (644)
Q Consensus 544 ~~~~~~~~~~~-~~~~~~~~~~~~ 566 (644)
--++|..+||| -|.---.|++.|
T Consensus 75 yal~i~wsDGH~~s~Y~~~~L~~~ 98 (101)
T 3luu_A 75 YAVQLHFSDGHNTGIFTWEYLRRL 98 (101)
T ss_dssp TEEEEEETTSCCCCEEEHHHHHHH
T ss_pred CeEEEEECCCCceeEECHHHHHHh
Confidence 46889999999 776666677765
Done!