RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2733
(644 letters)
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 114 bits (286), Expect = 5e-29
Identities = 57/278 (20%), Positives = 100/278 (35%), Gaps = 6/278 (2%)
Query: 2 TLLHILAYQGCVEELNILLARGACVYYPDD-AGDTALHYAAFGNKPDAIQINSHVSGANR 60
LL V+ + LL GA V + ++ G T LH A ++ D +++
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66
Query: 61 SRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIK 120
RK + L + + + + L K
Sbjct: 67 LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126
Query: 121 QDF---VLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNIL 177
+ + + + T + DA KG E+ +LL ++ ++ G N L
Sbjct: 127 RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 186
Query: 178 NYAVLRGNMKVTEKIL-ALNRNLATV-PKTSDGFTPLHVACFNDHIEIVELLVEKYKVNI 235
+A+L + E I L + A V + G TPL +A H+ +V+ L+E+ + I
Sbjct: 187 IHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI 246
Query: 236 NALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDI 273
N D +T L+ AV + L R + D D+
Sbjct: 247 NDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284
Score = 64.6 bits (156), Expect = 6e-12
Identities = 45/266 (16%), Positives = 85/266 (31%), Gaps = 75/266 (28%)
Query: 125 LLRNGCNVNIQDN-NQDTPMHDAVAKGFEEIQLLLLSHPEVN------------------ 165
LL G NVN Q+ TP+H+AV E+I LLL H
Sbjct: 24 LLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83
Query: 166 --------------LYLENSKGFNILNYAVLRGNMKVTEKILALNRNL--------ATVP 203
+ + GF A + G +K + + N+
Sbjct: 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143
Query: 204 KTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLM----AAVGQGQTSVIN 259
G T L A H+E++++L+++ ++NA D R L+ ++ ++ +
Sbjct: 144 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITH 203
Query: 260 YLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILL 319
L+ ++++ G L + E L
Sbjct: 204 LLLDHGADVNVRGERGKTPLIL------------------------------AVEKKHLG 233
Query: 320 AVFLFLVKHGAPLSLENNNRQKPLDL 345
V L + ++ +++ + L L
Sbjct: 234 LVQRLLEQEHIEINDTDSDGKTALLL 259
Score = 47.7 bits (112), Expect = 2e-06
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 207 DGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK-KRTPLMAAVGQGQTSVINYLM 262
+ L A N+ +++V+ L+E N+N + + TPL AV + ++ L+
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLL 59
Score = 40.3 bits (93), Expect = 5e-04
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 1 KTLLHILAYQGCVEELNILLAR-GACVYYPDDAGDTALHYAAFGNKPDAIQI 51
KT L + + + + LL + + D G TAL A ++
Sbjct: 220 KTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271
Score = 26.9 bits (58), Expect = 7.5
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 240 LKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDID-GNGLLHF 281
++ L+ AV ++ L+ ++ Q+ + G LH
Sbjct: 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHN 45
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 100 bits (250), Expect = 2e-23
Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 18/279 (6%)
Query: 4 LHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRK 63
LH+ A G V +LL R A G T LH A N D +++ G +
Sbjct: 136 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLP-RGGSPHSP 194
Query: 64 HIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTP---SAECSGILIK 120
+ + +VE +L TP +A+ +
Sbjct: 195 AWNGYTP-------LHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV 247
Query: 121 QDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYA 180
+ N N+ + + TP+H +G + +L+ H V + G+ L+ A
Sbjct: 248 ALLL--SKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPLHVA 304
Query: 181 VLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDL 240
GN+K+ + L KT G++PLH A H +IV LL++ + N +
Sbjct: 305 SHYGNIKLVK--FLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK-NGASPNEVSS 361
Query: 241 KKRTPLMAAVGQGQTSVINYL-MLRDVALDIQDIDGNGL 278
TPL A G SV + L ++ D + D + +
Sbjct: 362 DGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRM 400
Score = 100 bits (249), Expect = 3e-23
Identities = 67/375 (17%), Positives = 125/375 (33%), Gaps = 38/375 (10%)
Query: 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQI----NSHVSG 57
T LH+ ++ G + + LL RGA + +T LH AA + + + V+
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61
Query: 58 ANRSRK----HIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAE 113
+ + + H + ++ +N + + + +
Sbjct: 62 KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121
Query: 114 CSGILIKQDF------------------VLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQ 155
+ +LL + N N TP+H AV +I
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 181
Query: 156 LLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVA 215
LLL + + G+ L+ A + ++V + L + ++ G TPLH+A
Sbjct: 182 KLLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSL--LQYGGSANAESVQGVTPLHLA 238
Query: 216 CFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDG 275
H E+V L+ + N N + TPL +G V + L+ V +D G
Sbjct: 239 AQEGHAEMVA-LLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMG 297
Query: 276 NGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGP-----SNEHGILLAVFLFLVKHGA 330
LH N + + + P H + L+K+GA
Sbjct: 298 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGH---TDIVTLLLKNGA 354
Query: 331 PLSLENNNRQKPLDL 345
+ +++ PL +
Sbjct: 355 SPNEVSSDGTTPLAI 369
Score = 51.9 bits (123), Expect = 1e-07
Identities = 32/203 (15%), Positives = 57/203 (28%), Gaps = 28/203 (13%)
Query: 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRS 61
T LHI A Q VE LL G G T LH AA + + +
Sbjct: 200 TPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL 259
Query: 62 RK-------HIYKERHRTVTTE---KVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPS 111
H+ + + K + TP+ +
Sbjct: 260 GNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH 319
Query: 112 AECSGILIKQDF----------------VLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQ 155
K + +LL+NG + N ++ TP+ A G+ +
Sbjct: 320 QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVT 379
Query: 156 --LLLLSHPEVNLYLENSKGFNI 176
L +++ + + + +
Sbjct: 380 DVLKVVTDETSFVLVSDKHRMSF 402
Score = 46.5 bits (109), Expect = 6e-06
Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANR 60
+ LH A QG + + +LL GA G T L A + V+ +
Sbjct: 331 YSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT--DE 388
Query: 61 SRKHIYKERHRTVTTEKVQ 79
+ + ++HR E V
Sbjct: 389 TSFVLVSDKHRMSFPETVD 407
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 82.7 bits (203), Expect = 1e-18
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 46/261 (17%)
Query: 2 TLLHILAYQGCVEEL-NILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANR 60
++ LAY G +EEL +LA + D TALH+A + ++ +
Sbjct: 5 LMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN 64
Query: 61 SRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIK 120
+ L++ +E +
Sbjct: 65 DKDDAGW------------------------SPLHIAASAGRDEIV-------------- 86
Query: 121 QDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYA 180
LL G VN + N TP+H A +K EI ++LL N ++ ++ A
Sbjct: 87 --KALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG-GANPDAKDHYEATAMHRA 143
Query: 181 VLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDL 240
+GN+K+ +L + + ++G TPLH+AC + +E +LLV +I +
Sbjct: 144 AAKGNLKMIHILLYYKASTNI--QDTEGNTPLHLACDEERVEEAKLLVS-QGASIYIENK 200
Query: 241 KKRTPLMAAVGQGQTSVINYL 261
+++TPL A G G ++ +
Sbjct: 201 EEKTPLQVAKG-GLGLILKRM 220
Score = 56.9 bits (136), Expect = 1e-09
Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 7/209 (3%)
Query: 140 DTPMHDAVAKG-FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRN 198
+ + + G EE++ +L+ + L++A G+ ++ E +L L
Sbjct: 4 NLMVCNLAYSGKLEELKESILADK-SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 62
Query: 199 LATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVI 258
K G++PLH+A EIV+ L+ +NA++ TPL A + + +
Sbjct: 63 --VNDKDDAGWSPLHIAASAGRDEIVKALL-GKGAQVNAVNQNGCTPLHYAASKNRHEIA 119
Query: 259 NYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTP--ITREKSVPIYEEYLSVGGPSNEHG 316
L+ D +D +H K N + + S I + +
Sbjct: 120 VMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDE 179
Query: 317 ILLAVFLFLVKHGAPLSLENNNRQKPLDL 345
+ LV GA + +EN + PL +
Sbjct: 180 ERVEEAKLLVSQGASIYIENKEEKTPLQV 208
Score = 48.0 bits (113), Expect = 8e-07
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 9/156 (5%)
Query: 4 LHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQ-INSHVSGANRSR 62
LHI A G E + LL +GA V + G T LHYAA N+ + + + +
Sbjct: 74 LHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD 133
Query: 63 KHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQD 122
+ HR ++ L + T + + L E K
Sbjct: 134 HYEATAMHRAAAKGNLKMIHILLYYKASTNIQD-----TEGNTPLHLACDEERVEEAK-- 186
Query: 123 FVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLL 158
+L+ G ++ I++ + TP+ A ++ ++
Sbjct: 187 -LLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMV 221
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 78.2 bits (191), Expect = 1e-16
Identities = 43/240 (17%), Positives = 70/240 (29%), Gaps = 12/240 (5%)
Query: 1 KTLLHILAYQGCVEELNILLARGA---CVYYPDDAGDTALHYAAFGNKPDAIQINSHVSG 57
T LH+ L+ LL A + +D G TALH AA + ++
Sbjct: 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69
Query: 58 ANRSRKHIYKERHRTVTTEKVQRP-----SNLPKVEPETPMLNMKFIPRMNEDMLDTPSA 112
+ + P + + D P+A
Sbjct: 70 GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129
Query: 113 ECSGILIKQDFV--LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLEN 170
S + + + ++ + TP+H AV E+ LL E
Sbjct: 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189
Query: 171 SKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEK 230
+ G L+ AV V E +L + + G TPL A + + LL
Sbjct: 190 TCGRTPLHLAVEAQAASVLELLLKAGADPTA--RMYGGRTPLGSALLRPNPILARLLRAH 247
Score = 55.5 bits (132), Expect = 4e-09
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 204 KTSDGFTPLHVACFNDHIEIVELLVEK--YKVNINALDLKKRTPLMAAVGQGQTSVINYL 261
T DG T LH+A + H ++ L+ ++ + +T L A G+ S + L
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Query: 262 M 262
Sbjct: 65 Y 65
Score = 53.6 bits (127), Expect = 2e-08
Identities = 40/228 (17%), Positives = 66/228 (28%), Gaps = 20/228 (8%)
Query: 136 DNNQDTPMHDAVAKGFEEIQLLLLSH--PEVNLYLENSKGFNILNYAVLRGNMKVTEKIL 193
+ DT +H AV E LL L L+N G L+ A + G EK+
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 194 ALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNIN---------ALDLKKRT 244
A + G T LH+AC +L++ + + D T
Sbjct: 66 AAGAG--VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123
Query: 245 PLMAAVGQGQTSVIN--YLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIY 302
A Q + N D L ++ + +G + + +
Sbjct: 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD 183
Query: 303 EEYLSVGGPSNEHGIL-----LAVFLFLVKHGAPLSLENNNRQKPLDL 345
+ +V L+K GA + + PL
Sbjct: 184 LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGS 231
Score = 43.9 bits (102), Expect = 3e-05
Identities = 43/255 (16%), Positives = 67/255 (26%), Gaps = 28/255 (10%)
Query: 28 YPDDAGDTALHYAAFGNKPDAIQ-INSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPK 86
Y + GDTALH A + + A + + +T
Sbjct: 4 YVTEDGDTALHLAVIHQHEPFLDFLLGF--SAGHEYLDLQNDLGQTALHLAAILGEASTV 61
Query: 87 VEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDA 146
+ + R L + VLL+ + ++
Sbjct: 62 EKLYAAGAGVLVAERGGHTALHLACRVRAHTCAC---VLLQPRPSHPRDASDTYLTQSQD 118
Query: 147 VAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTS 206
+ S P N + E+ + L +
Sbjct: 119 CTPDTSHAPAAVDSQP----------------------NPENEEEPRDEDWRLQLEAENY 156
Query: 207 DGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDV 266
DG TPLHVA + E+V LL + RTPL AV SV+ L+
Sbjct: 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA 216
Query: 267 ALDIQDIDGNGLLHF 281
+ G L
Sbjct: 217 DPTARMYGGRTPLGS 231
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 76.3 bits (186), Expect = 7e-16
Identities = 41/248 (16%), Positives = 79/248 (31%), Gaps = 17/248 (6%)
Query: 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRS 61
+ G EE+ LL RGA + Y + G TALH A + +V
Sbjct: 42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDD---------NVDMVKFL 92
Query: 62 RKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ 121
++ + L + + + ++
Sbjct: 93 VENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDI----AEE 148
Query: 122 DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAV 181
+ + VN Q + + + + + L S ++ G L+ A
Sbjct: 149 EAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV-RHAKSGGTALHVAA 207
Query: 182 LRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK 241
+G +V + ++ ++ DG+TPLH A E +LVE ++ A++
Sbjct: 208 AKGYTEVLKLLIQARYDVNIKDY--DGWTPLHAAAHWGKEEACRILVE-NLCDMEAVNKV 264
Query: 242 KRTPLMAA 249
+T A
Sbjct: 265 GQTAFDVA 272
Score = 46.6 bits (109), Expect = 4e-06
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 207 DGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLM 262
D AC + E V L+E+ +IN ++ T L A ++ +L+
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLV 93
Score = 44.7 bits (104), Expect = 2e-05
Identities = 35/240 (14%), Positives = 69/240 (28%), Gaps = 19/240 (7%)
Query: 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRG 184
LL G ++N + + T +H A ++ L+ + +N +
Sbjct: 59 LLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAA---AS 115
Query: 185 NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRT 244
+ +++ S+G TPL +A E+++ V + V+I A
Sbjct: 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAAR----- 170
Query: 245 PLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEE 304
+L + G LH K + + + +
Sbjct: 171 --KEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK 228
Query: 305 YLSVGGP-----SNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILED-TSLLNEIME 358
P LV++ + N Q D+ ED L E+ +
Sbjct: 229 DYDGWTPLHAAAHWGK---EEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQK 285
Score = 40.9 bits (94), Expect = 3e-04
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAA 41
T LH A+ G E IL+ + + G TA A
Sbjct: 234 TPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273
Score = 30.5 bits (67), Expect = 0.60
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 244 TPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFY 289
+AA G T + L+ R ++ ++DG LH I N
Sbjct: 42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVD 87
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 74.3 bits (181), Expect = 3e-15
Identities = 26/236 (11%), Positives = 63/236 (26%), Gaps = 52/236 (22%)
Query: 30 DDAGDTALHYAAFGNKPDAIQI-NSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVE 88
D+ G+T LH+ + ++ H S + V + +
Sbjct: 104 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL- 162
Query: 89 PETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVA 148
L + ++D+ T +H +
Sbjct: 163 ------------------------------------LDYLYPCLILEDSMNRTILHHIII 186
Query: 149 KG------------FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALN 196
+ + ++ + ++ + N + E +
Sbjct: 187 TSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW 246
Query: 197 RNLATV-PKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVG 251
+ + S+G T L++A +I IV+ L++ Y + + P+ G
Sbjct: 247 IIANMLNAQDSNGDTCLNIAARLGNISIVDALLD-YGADPFIANKSGLRPVDFGAG 301
Score = 68.2 bits (165), Expect = 4e-13
Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 16/173 (9%)
Query: 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLL---LSHPEVNLYLENSKGFNILNYAV 181
L+++G N DN ++ + AV L + L LE+S IL++ +
Sbjct: 126 LVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHII 185
Query: 182 LRGNMK-----------VTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEK 230
+ M + + +N T++ + + I+E L K
Sbjct: 186 ITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLK 245
Query: 231 YKV--NINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHF 281
+ + +NA D T L A G S+++ L+ I + G + F
Sbjct: 246 WIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDF 298
Score = 61.2 bits (147), Expect = 9e-11
Identities = 55/325 (16%), Positives = 105/325 (32%), Gaps = 59/325 (18%)
Query: 40 AAFGNKPDAIQ--INSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMK 97
+ F + P I + S V N + + R + E + P++L
Sbjct: 12 SDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGS 71
Query: 98 FIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQ-DNNQDTPMHDAVAKGFEEIQL 156
+ D+ E + N+NI D + +TP+H + E+
Sbjct: 72 SNQQQQHVSFDSLLQEVNDAFPNTQL-------NLNIPVDEHGNTPLHWLTSIANLELVK 124
Query: 157 LLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGF--TPLHV 214
L+ H N ++ G + L AV N + AL L D T LH
Sbjct: 125 HLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 183
Query: 215 ACFNDHIE------------IVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLM 262
+ ++ +V+K I + +K + G+ + S++ L
Sbjct: 184 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 243
Query: 263 LRDVA---LDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILL 319
L+ + L+ QD +G+ L+ N +
Sbjct: 244 LKWIIANMLNAQDSNGDTCLNIAARLGN-------------------------------I 272
Query: 320 AVFLFLVKHGAPLSLENNNRQKPLD 344
++ L+ +GA + N + +P+D
Sbjct: 273 SIVDALLDYGADPFIANKSGLRPVD 297
Score = 44.3 bits (103), Expect = 3e-05
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAA 41
T L+I A G + ++ LL GA + + +G + + A
Sbjct: 260 DTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 71.0 bits (172), Expect = 2e-14
Identities = 42/261 (16%), Positives = 76/261 (29%), Gaps = 43/261 (16%)
Query: 4 LHILAYQGCVEELNILL-ARGACVYYPDDAGDTALHYAA-FGNKPDAIQINSHVSGANRS 61
LH + ++ LL ++ + + D G LH++ F + S + N
Sbjct: 4 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63
Query: 62 RKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ 121
V + + ++ I L + +
Sbjct: 64 DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW---FEV 120
Query: 122 DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAV 181
L+ NG +V I+D P+H A + G ++ LL + +
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN-------------- 166
Query: 182 LRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK 241
+ G+TPL A H + LLVEKY + +D K
Sbjct: 167 ---------------------WQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNK 205
Query: 242 KRTPLMAAVGQGQTSVINYLM 262
A+ V + +
Sbjct: 206 GAKAEDVAL---NEQVKKFFL 223
Score = 52.9 bits (125), Expect = 2e-08
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 210 TPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLM 262
PLH AC + V+ L+ + D R PL +V + ++L+
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLL 54
Score = 45.2 bits (105), Expect = 8e-06
Identities = 42/213 (19%), Positives = 76/213 (35%), Gaps = 8/213 (3%)
Query: 140 DTPMHDAVAKG-FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRN 198
+ P+H A + F ++Q LL S P L ++ G L+++V ++T +L+ N
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKP-SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 59
Query: 199 LATVPKTSDGFTPLHVACFNDHIEIVELLV--EKYKVNINALDLKKRTPLMAAVGQGQTS 256
+ D + V + K ++N + + T L AVG+
Sbjct: 60 VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 119
Query: 257 VINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGG----PS 312
V +L+ ++ I+D LH + + G +
Sbjct: 120 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHA 179
Query: 313 NEHGILLAVFLFLVKHGAPLSLENNNRQKPLDL 345
G A L + K+GA L +N K D+
Sbjct: 180 LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDV 212
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 71.7 bits (174), Expect = 2e-14
Identities = 33/247 (13%), Positives = 70/247 (28%), Gaps = 18/247 (7%)
Query: 1 KTLLHILAYQGCVEELNILL--------ARGACVYYPDDAGDTALHYAAFGNKPDAIQIN 52
+T+LH +A E+ L+ A GA V D +T L A + +
Sbjct: 34 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYL 93
Query: 53 SHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSA 112
+ + + + ++
Sbjct: 94 MKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHN 153
Query: 113 E-------CSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVN 165
E ++ K V + + T +H A I L+ N
Sbjct: 154 EGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 213
Query: 166 LYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVE 225
++ G + A G ++V ++ ++ + T +A N+H IV+
Sbjct: 214 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA--VDATDHTARQLAQANNHHNIVD 271
Query: 226 LLVEKYK 232
+ ++ +
Sbjct: 272 IF-DRCR 277
Score = 70.9 bits (172), Expect = 4e-14
Identities = 35/275 (12%), Positives = 79/275 (28%), Gaps = 16/275 (5%)
Query: 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQ-INSHVSGAN 59
++ + + + + R + T LH+ A + + + + H +
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60
Query: 60 RSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILI 119
+ T + + M N+ +
Sbjct: 61 IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120
Query: 120 KQDFVLLRNGCNVNIQDNNQDTPMHD----AVAKGFEEIQLLLL---------SHPEVNL 166
+L + + M A +G +++ L
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180
Query: 167 YLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVEL 226
E KG L+YA NM + + + + + DG TP+ +A IE+V
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYL-VGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMY 239
Query: 227 LVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYL 261
L+++ ++ A+D T A ++++
Sbjct: 240 LIQQ-GASVEAVDATDHTARQLAQANNHHNIVDIF 273
Score = 41.3 bits (95), Expect = 2e-04
Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 13/82 (15%)
Query: 210 TPLHVACF-NDHIEIVELLVEKYKVNINALDLK-KRTPLMAAVGQGQTSVINYLMLRDVA 267
+P+ + I E + + ++N +D + RT L L++ +
Sbjct: 2 SPIKLHTEAAGSYAITEPITRE---SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAK 58
Query: 268 LDI--------QDIDGNGLLHF 281
I D D N L
Sbjct: 59 ECIAAGADVNAMDCDENTPLML 80
Score = 37.0 bits (84), Expect = 0.005
Identities = 34/243 (13%), Positives = 66/243 (27%), Gaps = 24/243 (9%)
Query: 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPE-------VNLYLENSKGFNIL 177
+ R N+ + T +H + E L+ H ++ + L
Sbjct: 20 ITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPL 78
Query: 178 NYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINA 237
AVL ++ ++ + K+ A + + + L K K +I
Sbjct: 79 MLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE 138
Query: 238 LDLKKRTPLMAAVGQGQTSVINYLMLRDVA-----------LDIQDIDGNGLLHFLFIKK 286
LD T LM + L D + G LH+
Sbjct: 139 LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS 198
Query: 287 NFYKTPITREKSVPIYEEYLSVGGPSNEHGIL----LAVFLFLVKHGAPLSLENNNRQKP 342
N ++ G + + V ++L++ GA + +
Sbjct: 199 NMPIV-KYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTA 257
Query: 343 LDL 345
L
Sbjct: 258 RQL 260
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 69.0 bits (167), Expect = 5e-14
Identities = 41/215 (19%), Positives = 72/215 (33%), Gaps = 10/215 (4%)
Query: 14 EELNILLARGACV-YYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRT 72
+ ++ LLA+GA + D G+T+LH AA + DA + S+ + +
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62
Query: 73 VTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNV 132
+ T + + + E L+ ++
Sbjct: 63 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEG------MVEDLITADADI 116
Query: 133 NIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKI 192
N DN+ T +H A A + +L N ++ K L A G+ + ++ +
Sbjct: 117 NAADNSGKTALHWAAAVNNT-EAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKAL 175
Query: 193 LALNRNLATVPKTSDGFTPLHVACFNDHIEIVELL 227
L N P VA H +IV LL
Sbjct: 176 LDNFANREI--TDHMDRLPRDVASERLHHDIVRLL 208
Score = 44.0 bits (102), Expect = 2e-05
Identities = 41/222 (18%), Positives = 65/222 (29%), Gaps = 35/222 (15%)
Query: 125 LLRNGCNVNI-QDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLR 183
LL G +N D +T +H A + L +A +
Sbjct: 8 LLAQGAELNATMDKTGETSLHLAARFARADAAKRL--LDAGADANSQDNTGRTPLHAAVA 65
Query: 184 GNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKR 243
+ +IL NR + DG TPL +A +VE L+ +INA D +
Sbjct: 66 ADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITAD-ADINAADNSGK 124
Query: 244 TPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYE 303
T L A T +N L++ D QD L
Sbjct: 125 TALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFL---------------------- 162
Query: 304 EYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDL 345
L+ + A + ++ + P D+
Sbjct: 163 ---------AAREGSYEASKALLDNFANREITDHMDRLPRDV 195
Score = 39.8 bits (91), Expect = 5e-04
Identities = 11/51 (21%), Positives = 18/51 (35%)
Query: 1 KTLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQI 51
+T L + A +G E LL A D A+ D +++
Sbjct: 157 ETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRL 207
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 67.6 bits (163), Expect = 3e-13
Identities = 37/228 (16%), Positives = 70/228 (30%), Gaps = 9/228 (3%)
Query: 1 KTLLHILAYQG---CVEEL-NILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVS 56
T LHI QG V L N+ G + ++ T LH A P +++
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63
Query: 57 GANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSG 116
+ + + + L+++ L
Sbjct: 64 ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC- 122
Query: 117 ILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNI 176
+ +LL G +++ D + + LL N+ + G +
Sbjct: 123 --QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSA 180
Query: 177 LNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIV 224
L+ A RG + + ++ + + K TPL VA I+I+
Sbjct: 181 LHSASGRGLLPLVRTLVRSGADSSL--KNCHNDTPLMVARSRRVIDIL 226
Score = 61.0 bits (146), Expect = 5e-11
Identities = 41/229 (17%), Positives = 75/229 (32%), Gaps = 4/229 (1%)
Query: 31 DAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPE 90
+ GDT LH A A+ ++ IY +T V
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60
Query: 91 TPMLNMKFIPRMNEDMLDTPSAECS-GILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAK 149
T + + R + S L ++ ++ + T +H AV
Sbjct: 61 TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 120
Query: 150 GFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGF 209
+E LLL ++ G + L +AV ++ + + +L N + G
Sbjct: 121 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN--VNAQMYSGS 178
Query: 210 TPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVI 258
+ LH A + +V LV + + + TPLM A + ++
Sbjct: 179 SALHSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSRRVIDIL 226
Score = 40.2 bits (92), Expect = 3e-04
Identities = 46/223 (20%), Positives = 78/223 (34%), Gaps = 32/223 (14%)
Query: 124 VLLRNGCNVNIQDNNQDTPMHDAVAKGF-EEIQLLLLSHPEVNLYLENSKGFNILNYAVL 182
+ + G ++I +N + TP+H AV ++LL+ + + + L
Sbjct: 25 LFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHR 84
Query: 183 RGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKK 242
A L + DG T LHVA + E V+LL+E+
Sbjct: 85 SPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSG 144
Query: 243 RTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVPIY 302
R+PL+ AV S++ L+ ++ Q G+ LH +
Sbjct: 145 RSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGL--------------- 189
Query: 303 EEYLSVGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDL 345
L + LV+ GA SL+N + PL +
Sbjct: 190 ----------------LPLVRTLVRSGADSSLKNCHNDTPLMV 216
Score = 39.8 bits (91), Expect = 5e-04
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 4 LHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQ 50
LH + +G + + L+ GA + DT L A D ++
Sbjct: 181 LHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 31.4 bits (69), Expect = 0.24
Identities = 14/51 (27%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Query: 243 RTPLMAAVGQGQTSVINYLM----LRDVALDIQDIDGNGLLHFLFIKKNFY 289
TPL AV QG ++ L+ LDI + LH I
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPS 54
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 68.8 bits (167), Expect = 4e-13
Identities = 28/281 (9%), Positives = 54/281 (19%), Gaps = 37/281 (13%)
Query: 1 KTLLHILAYQGCVEELNI---LLARGACVYYPDDAGDTALHYAAFGNKPDAIQI-NSHVS 56
+ + + A GC L+ LL V A AA +
Sbjct: 91 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 150
Query: 57 GANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSG 116
+ + E E
Sbjct: 151 TEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH 210
Query: 117 ILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNI 176
+I LL + + ++ V +
Sbjct: 211 NVIN---FLLDCPVMLAYAEIHEFEYGEKYVNPF----------------IARHVNRLKE 251
Query: 177 LNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVE----KYK 232
++ A N ++ + L + L ++ + L+ K
Sbjct: 252 MHDAFKLSNPDGVFDLVTKSECL----QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKAL 307
Query: 233 VNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALDIQDI 273
+ L A+ G L L I +
Sbjct: 308 APTATIPGDANELLRLALRLGNQGACALL------LSIPSV 342
Score = 62.6 bits (151), Expect = 4e-11
Identities = 27/183 (14%), Positives = 56/183 (30%), Gaps = 4/183 (2%)
Query: 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEI--QLLLLSHPEVNLYLENSKGFNILNYAVL 182
+ + + + + A G L LL + + + ++ + A
Sbjct: 76 AKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE 135
Query: 183 RGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEK--YKVNINALDL 240
G++ V ++ L ++ + +A N H+ ++ L E +
Sbjct: 136 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAE 195
Query: 241 KKRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHFLFIKKNFYKTPITREKSVP 300
AAVG+G +VIN+L+ V L +I +E
Sbjct: 196 NYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDA 255
Query: 301 IYE 303
Sbjct: 256 FKL 258
Score = 41.8 bits (97), Expect = 2e-04
Identities = 21/164 (12%), Positives = 44/164 (26%), Gaps = 19/164 (11%)
Query: 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRS 61
+G +N LL + A + + + +
Sbjct: 199 AFRWAAVGRGHHNVINFLLDCPVML-------AYAEIHEFEYGEKYVNPFIARHVNRLKE 251
Query: 62 RKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ 121
+K + + V + L ++ R +E +LD L+
Sbjct: 252 MHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIR-----RNDEVLLDDIR-----FLLSI 301
Query: 122 DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVN 165
++ + + + A+ G + LLLS P V
Sbjct: 302 P--GIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVL 343
Score = 28.3 bits (62), Expect = 3.0
Identities = 10/134 (7%), Positives = 31/134 (23%), Gaps = 17/134 (12%)
Query: 210 TPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYLMLRDVALD 269
L + + + + + ++++ L K+ + + V L L +
Sbjct: 14 PQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYN 73
Query: 270 IQDIDGNGLLHFLFIKKNFYKTPITREKSVPIYEEYLSVGGPSNEHGILLAVFLFLVKHG 329
H K + +++ L L+
Sbjct: 74 RNAKQLWSDAH---KKGIKSEVIC-----------FVAA---ITGCSSALDTLCLLLTSD 116
Query: 330 APLSLENNNRQKPL 343
+ + +
Sbjct: 117 EIVKVIQAENYQAF 130
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 59.5 bits (142), Expect = 1e-10
Identities = 32/243 (13%), Positives = 62/243 (25%), Gaps = 40/243 (16%)
Query: 1 KTLLHILAYQGCVEE----LNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVS 56
+ LH+ + + A + + ++ T LH A N+P+ +
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62
Query: 57 GANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSG 116
R + + TP L+ A G
Sbjct: 63 CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG 122
Query: 117 ILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNI 176
L + ++ + N T +H AV ++ V+L L+ N
Sbjct: 123 YLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL---------VSLLLKCGADVNR 173
Query: 177 LNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNIN 236
+ Y G++P + I + L + N+
Sbjct: 174 VTY---------------------------QGYSPYQLTWGRPSTRIQQQLGQLTLENLQ 206
Query: 237 ALD 239
L
Sbjct: 207 MLP 209
Score = 48.7 bits (114), Expect = 6e-07
Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 207 DGFTPLHVACFNDHIEIVELLVEK---YKVNINALDLKKRTPLMAA 249
DG + LH+A ++ + ++ + +N + ++TPL A
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46
Score = 42.2 bits (97), Expect = 7e-05
Identities = 33/160 (20%), Positives = 55/160 (34%), Gaps = 3/160 (1%)
Query: 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAV--- 181
+ + +N Q+N Q TP+H AV EI LL + +
Sbjct: 25 VKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGC 84
Query: 182 LRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLK 241
L +T+ + + +G T LH+A + ++ IVELLV
Sbjct: 85 LASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCN 144
Query: 242 KRTPLMAAVGQGQTSVINYLMLRDVALDIQDIDGNGLLHF 281
RT L AV +++ L+ ++ G
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 184
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 52.6 bits (124), Expect = 1e-08
Identities = 28/158 (17%), Positives = 57/158 (36%), Gaps = 7/158 (4%)
Query: 4 LHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRK 63
L A +G +E+L LL V + G TAL GN A ++ + + +
Sbjct: 5 LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDR 64
Query: 64 HIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQDF 123
+ H + L + + + + + + ++ G L +F
Sbjct: 65 TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA-------KEGHLRVVEF 117
Query: 124 VLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161
++ NV +++ DT A G E+ L+ ++
Sbjct: 118 LVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 41.4 bits (95), Expect = 7e-05
Identities = 6/27 (22%), Positives = 10/27 (37%)
Query: 204 KTSDGFTPLHVACFNDHIEIVELLVEK 230
+ G T +A E+V L+
Sbjct: 129 RNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 36.0 bits (81), Expect = 0.005
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 210 TPLHVACFNDHIEIVELLVEKYKVNINALD 239
L A +E + L++ VN+NA +
Sbjct: 3 NELASAAARGDLEQLTSLLQN-NVNVNAQN 31
Score = 34.9 bits (78), Expect = 0.012
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Query: 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRG 184
LL+N NVN Q+ T + E + L N L++ GF +++ A G
Sbjct: 20 LLQNNVNVNAQNGFGRTALQVMKLGNPEIARRL--LLRGANPDLKDRTGFAVIHDAARAG 77
Query: 185 NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRT 244
+ + +L + ++G PLH+A H+ +VE LV+ N+ + K T
Sbjct: 78 FLDTLQTLL--EFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT 135
Query: 245 PLMAAVGQGQTSVINYLM 262
A G+ V++ +
Sbjct: 136 ACDLARLYGRNEVVSLMQ 153
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 44.0 bits (102), Expect = 9e-06
Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 10/159 (6%)
Query: 4 LHILAYQGCVEELNILLAR-GACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSR 62
L A +G V+E+ LL R + G TAL FG+ A+++ + N
Sbjct: 6 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 65
Query: 63 KHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQD 122
H T + L + + + + ++
Sbjct: 66 TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHL---------AVQEGHTAV 116
Query: 123 FVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161
L +++ +D TP+ A+ +G +++ +L H
Sbjct: 117 VSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 40.6 bits (93), Expect = 1e-04
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 204 KTSDGFTPLHVACFNDHIEIVELLVE 229
+ + G TPL +A ++V++L
Sbjct: 129 RDARGLTPLELALQRGAQDLVDILQG 154
Score = 37.9 bits (86), Expect = 0.001
Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 6/137 (4%)
Query: 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRG 184
L R + + + T + + +
Sbjct: 22 LHRELVHPDALNRFGKTALQVMMFGSTAIAL----ELLKQGASPNVQDTSGTSPVHDAAR 77
Query: 185 NMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRT 244
+ + + G P+H+A H +V + +++ D + T
Sbjct: 78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS--FLAAESDLHRRDARGLT 135
Query: 245 PLMAAVGQGQTSVINYL 261
PL A+ +G +++ L
Sbjct: 136 PLELALQRGAQDLVDIL 152
Score = 35.9 bits (81), Expect = 0.005
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 208 GFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLM 247
L A ++ V L+ + V+ +AL+ +T L
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQ 41
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 43.8 bits (102), Expect = 1e-05
Identities = 19/121 (15%), Positives = 34/121 (28%), Gaps = 6/121 (4%)
Query: 125 LLRNGCNVNIQ------DNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILN 178
+G ++ + +T +H AV ++ + + L+ G
Sbjct: 25 AYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTA 84
Query: 179 YAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINAL 238
L L + G TPL +A H ELL + N+
Sbjct: 85 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSH 144
Query: 239 D 239
Sbjct: 145 V 145
Score = 37.6 bits (86), Expect = 0.001
Identities = 21/172 (12%), Positives = 37/172 (21%), Gaps = 50/172 (29%)
Query: 1 KTLLHIL---AYQGCVEELNILLARGACVYYP------DDAGDTALHYAAFGNKPDAIQI 51
LH L + L A G + + +TALH A ++ I
Sbjct: 4 AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI 63
Query: 52 NS--HVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDT 109
+ N ++ L
Sbjct: 64 VDFLVQNSGNLDKQTGKGSTALH------------------YCCLTDNAECLKLLLR--- 102
Query: 110 PSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSH 161
++ I + + +TP+ A E + LL
Sbjct: 103 ------------------GKASIEIANESGETPLDIAKRLKHEHCEELLTQA 136
Score = 31.1 bits (69), Expect = 0.20
Identities = 8/46 (17%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 23 GACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKE 68
A + +++G+T L A ++ + + + R H++ E
Sbjct: 104 KASIEIANESGETPLDIAKRLKHEHCEELLTQ-ALSGRFNSHVHVE 148
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 43.3 bits (100), Expect = 2e-05
Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 8/157 (5%)
Query: 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRS 61
L A G +E+ IL+A GA G + LH AA ++
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWL-GTSPLHLAAQYGHFSTTEVLLR----AGV 58
Query: 62 RKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ 121
+ + RT ++ + L + +++
Sbjct: 59 SRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL 118
Query: 122 DFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLL 158
+ G +V+ Q T ++ G E++ +L
Sbjct: 119 LI---KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 39.8 bits (91), Expect = 3e-04
Identities = 9/67 (13%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 161 HPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLATVPKTSDGFTPLHVACFNDH 220
++ ++ L++A + +V E ++ ++ T ++ T ++ N +
Sbjct: 88 KHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT--QSKFCKTAFDISIDNGN 145
Query: 221 IEIVELL 227
++ E+L
Sbjct: 146 EDLAEIL 152
Score = 36.8 bits (83), Expect = 0.002
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 208 GFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINYL 261
T LH A ++H E+VEL + KY +++ +T ++ G + L
Sbjct: 100 KMTALHWATEHNHQEVVEL-LIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 33.3 bits (74), Expect = 0.041
Identities = 5/24 (20%), Positives = 8/24 (33%)
Query: 207 DGFTPLHVACFNDHIEIVELLVEK 230
D L A + V +L+
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMAN 24
Score = 27.5 bits (59), Expect = 3.3
Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 9/156 (5%)
Query: 35 TALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETPML 94
L AA + D ++I +GA + + + E +
Sbjct: 4 KKLLEAARAGQDDEVRILMA-NGAPFTTDWLGT-------SPLHLAAQYGHFSTTEVLLR 55
Query: 95 NMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFEEI 154
+ S VLL++G +VN +D + T +H A +E+
Sbjct: 56 AGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV 115
Query: 155 QLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTE 190
+ LL +++ ++ + ++ GN + E
Sbjct: 116 -VELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAE 150
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId:
9606]}
Length = 79
Score = 40.8 bits (95), Expect = 2e-05
Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 10/75 (13%)
Query: 460 SKIERVNYLESKISEIEEMNT----CTICMERCRNTIFL-CGHGTCDVCAKTL-----KF 509
+ + + + + EM + C IC E ++ CGH C C + +
Sbjct: 1 TPQDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQG 60
Query: 510 CHMCRKLIEQRINIS 524
C CR I+ I
Sbjct: 61 CPFCRCEIKGTEPIV 75
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia
proto-oncoprotein PML {Human (Homo sapiens) [TaxId:
9606]}
Length = 56
Score = 37.9 bits (88), Expect = 1e-04
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 474 EIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTLKF-CHMCRK 515
E + C C + L C H C C + C +C+
Sbjct: 2 EEFQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQA 45
Score = 30.2 bits (68), Expect = 0.063
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 400 ECAVCSELGVANVLLKPCNHAVACEECSSRMKKCIMCKT 438
C C LL PC H + + +C +C+
Sbjct: 8 RCQQCQAEAKCPKLL-PCLHTLCSGCLEASGMQCPICQA 45
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 38.1 bits (88), Expect = 4e-04
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 464 RVNYLESKISEIEEMNTCTICMERCRNTIFL-CGHGTCDVC-------AKTLKFCHMCRK 515
RV +++ I+ ++++ C IC+E + + C H C C K C +C+
Sbjct: 7 RVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKN 66
Query: 516 LIEQR 520
I +R
Sbjct: 67 DITKR 71
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 97
Score = 36.3 bits (83), Expect = 0.002
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Query: 469 ESKISEIEEMNTCTICME--RCRNTIFLCGHGTCDVCAKTL--KFCHMCRKLIEQR 520
+ + +E++ C+ C R + C H C C C +C +
Sbjct: 13 RAALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQ 68
Score = 27.4 bits (60), Expect = 1.8
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query: 399 VECAVCSELGVANVLLKPCNHAVACEECSSRM--KKCIMCKTFIEMRVTTDGRMVPGIER 456
+ C+ C+ + V L C H + C C S C +C T ++ R + +
Sbjct: 23 LRCSRCTNILREPVCLGGCEH-IFCSNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSM-- 79
Query: 457 CDKSKIERVNYLESKISE 474
R ++++S+
Sbjct: 80 IQLCSKLRNLLHDNELSD 97
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine
herpesvirus 1 [TaxId: 10326]}
Length = 68
Score = 34.9 bits (80), Expect = 0.002
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Query: 481 CTICMERCRNTIFL--CGHGTCDVC----AKTLKFCHMCRKLIEQRINISRA 526
C IC+E N C H C VC + C +C+ +E ++ +
Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESVVHTIES 59
Score = 31.5 bits (71), Expect = 0.038
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 400 ECAVCSELGVANVLLKPCNHAVACEEC----SSRMKKCIMCKTFIE 441
C +C E + PC H C C + C +CK +E
Sbjct: 7 RCPICLEDPSNYSMALPCLH-AFCYVCITRWIRQNPTCPLCKVPVE 51
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 36.1 bits (81), Expect = 0.003
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 203 PKTSDGFTPLHVACFNDHIEIVELL 227
+ + G P+ +A H ++ L
Sbjct: 97 VRDAWGRLPVDLAEELGHRDVARYL 121
Score = 33.4 bits (74), Expect = 0.023
Identities = 17/130 (13%), Positives = 39/130 (30%), Gaps = 7/130 (5%)
Query: 31 DAGDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPE 90
+ L AA + + ++ GAN + + Y R V R + L +
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMMMGSARVAELLLLHGA 59
Query: 91 TPMLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKG 150
P + +++ + ++++D P+ A G
Sbjct: 60 EPNCADPATLTRPVHDAAREGFLDTLVVLHRAG------ARLDVRDAWGRLPVDLAEELG 113
Query: 151 FEEIQLLLLS 160
++ L +
Sbjct: 114 HRDVARYLRA 123
Score = 30.3 bits (66), Expect = 0.25
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 210 TPLHVACFNDHIEIVELLVE 229
L A +E V L+E
Sbjct: 5 DWLATAAARGRVEEVRALLE 24
Score = 27.2 bits (58), Expect = 3.3
Identities = 18/121 (14%), Positives = 30/121 (24%), Gaps = 4/121 (3%)
Query: 141 TPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNLA 200
+ A A+G E LL N+ + L L
Sbjct: 5 DWLATAAARGRVEEVRALLEAGANP----NAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 201 TVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINALDLKKRTPLMAAVGQGQTSVINY 260
T + +++ + ++ D R P+ A G V Y
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120
Query: 261 L 261
L
Sbjct: 121 L 121
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1
(RAG1), dimerization domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 86
Score = 33.0 bits (75), Expect = 0.014
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 10/62 (16%)
Query: 460 SKIERVNYLESKISEIEEMNTCTICMERCRNTIFL-CGHGTCDVCAKTL-----KFCHMC 513
+K+ V++ + I +C IC + + C H C +C +C C
Sbjct: 9 TKLLAVDFPAHFVKSI----SCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSC 64
Query: 514 RK 515
R
Sbjct: 65 RY 66
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 32.0 bits (71), Expect = 0.085
Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
Query: 125 LLRNGCNVNIQDNNQDTPMHDAVAKGFEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRG 184
++ + ++ ++ T +H+AV G EI L+ +S G+ L+ A
Sbjct: 20 IIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCN 78
Query: 185 NMKVTEKILALNRNLATVPKTSDGFTP--LHVACFNDHIEIVELLVEK 230
N++V + ++ + + SD T + + + L
Sbjct: 79 NVQVCKFLVESGAAVFAM-TYSDMQTAADKCEEMEEGYTQCSQFLYGV 125
Score = 31.6 bits (70), Expect = 0.099
Identities = 13/163 (7%), Positives = 35/163 (21%), Gaps = 43/163 (26%)
Query: 2 TLLHILAYQGCVEELNILLARGACVYYPDDAGDTALHYAAFGNKPDAIQINSHVSGANRS 61
LL + +G + + ++ + +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDP-------------------------SLPNDEGITA 37
Query: 62 RKHIYKERHRTVTTEKVQRPSNLPKVEPETPMLNMKFIPRMNEDMLDTPSAECSGILIKQ 121
+ H + VQ N+ + + N +
Sbjct: 38 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKF------------ 85
Query: 122 DFVLLRNGCNVNIQDNNQD---TPMHDAVAKGFEEIQLLLLSH 161
L+ +G V + + + +G+ + L
Sbjct: 86 ---LVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 125
Score = 31.6 bits (70), Expect = 0.11
Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 9/126 (7%)
Query: 141 TPMHDAVAKG-FEEIQLLLLSHPEVNLYLENSKGFNILNYAVLRGNMKVTEKILALNRNL 199
+ D+ +G F+ +Q ++ + +L + + +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV----QFGV 58
Query: 200 ATVPKTSDGFTPLHVACFNDHIEIVELLVEKYKVNINAL---DLKKRTPLMAAVGQGQTS 256
SDG+TPLH A +++++ + LVE + A+ D++ + +G T
Sbjct: 59 NVNAADSDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDMQTAADKCEEMEEGYTQ 117
Query: 257 VINYLM 262
+L
Sbjct: 118 CSQFLY 123
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 30.6 bits (67), Expect = 0.19
Identities = 5/22 (22%), Positives = 8/22 (36%)
Query: 210 TPLHVACFNDHIEIVELLVEKY 231
A N ++ V+ V K
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKG 25
Score = 27.6 bits (59), Expect = 2.6
Identities = 13/126 (10%), Positives = 32/126 (25%), Gaps = 10/126 (7%)
Query: 33 GDTALHYAAFGNKPDAIQINSHVSGANRSRKHIYKERHRTVTTEKVQRPSNLPKVEPETP 92
D +A D ++ ++ E
Sbjct: 2 CDKEFMWALKNGDLDEVKD-------YVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFL 54
Query: 93 MLNMKFIPRMNEDMLDTPSAECSGILIKQDFVLLRNGCNVNIQDNNQDTPMHDAVAKGFE 152
+L I ++ + + + +LL G + ++ + T + +
Sbjct: 55 LLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN---Q 111
Query: 153 EIQLLL 158
I+ LL
Sbjct: 112 AIKALL 117
Score = 26.0 bits (55), Expect = 7.0
Identities = 5/22 (22%), Positives = 8/22 (36%)
Query: 204 KTSDGFTPLHVACFNDHIEIVE 225
K DG T L +++
Sbjct: 97 KGPDGLTALEATDNQAIKALLQ 118
>d2zdra2 c.1.10.6 (A:2-281) Capsule biosynthesis protein SiaC,
N-terminal domain {Neisseria meningitidis [TaxId: 487]}
Length = 280
Score = 31.5 bits (70), Expect = 0.25
Identities = 13/116 (11%), Positives = 30/116 (25%), Gaps = 2/116 (1%)
Query: 417 CNHAVACEECSSRMKKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISEIE 476
CN+ + +S K I+ + + + + N + ++
Sbjct: 134 CNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVR 193
Query: 477 EMNTCTICMERCRNTIFLCGHGTCDVCAKTLKFCHMCRKLIEQRINISRAFVSPDQ 532
+ I L H + L + ++E+ PD
Sbjct: 194 LGGMNDLSEAFPDAIIGLSDHTLDNYAC--LGAVALGGSILERHFTDRMDRPGPDI 247
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens)
[TaxId: 9606]}
Length = 65
Score = 29.0 bits (64), Expect = 0.31
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 11/59 (18%)
Query: 480 TCTICME------RCRNTIFLCGHGTCDVCAKTL-----KFCHMCRKLIEQRINISRAF 527
C C + + +CGH C+ C L C C + + + F
Sbjct: 5 GCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLF 63
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa)
[TaxId: 4530]}
Length = 55
Score = 28.3 bits (63), Expect = 0.39
Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 9/52 (17%)
Query: 475 IEEMNTCTICMERCRN-----TIFLCGHGTCDVCA----KTLKFCHMCRKLI 517
+++ C +C+ + + CGHG C + C +CR +
Sbjct: 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53
>d1rw0a_ d.194.1.2 (A:) Hypothetical protein yfiH {Salmonella typhi
[TaxId: 90370]}
Length = 243
Score = 30.6 bits (68), Expect = 0.43
Identities = 11/97 (11%), Positives = 20/97 (20%), Gaps = 7/97 (7%)
Query: 391 RSSCQNVPVECAVCSELGVAN---VLLKPCNHAVACEECSSRMKKCIMCKTFIEMRVTTD 447
+E V L P A E + +
Sbjct: 127 WRGLCEGVLEETVTCFADKPENIIAWLGPAIGPAAFEVGPEVRDAFLAKDAQADSAFLPH 186
Query: 448 GRMVPGIERCDKSKIERVNYLESKISEIEEMNTCTIC 484
G D ++ R + + + + CT
Sbjct: 187 GEKF----LADIYQLARQRLANTGVEHVYGGDRCTFS 219
>d1vq2a_ c.97.1.2 (A:) Deoxycytidylate deaminase {Bacteriophage T4
[TaxId: 10665]}
Length = 193
Score = 29.5 bits (65), Expect = 0.92
Identities = 14/136 (10%), Positives = 35/136 (25%), Gaps = 7/136 (5%)
Query: 386 KLLARRSSCQNVPVECAVCSELGV-------ANVLLKPCNHAVACEECSSRMKKCIMCKT 438
L+++ S C + V + + + C A + K + +
Sbjct: 11 YLVSQESKCCSWKVGAVIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKHAIIQG 70
Query: 439 FIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISEIEEMNTCTICMERCRNTIFLCGHG 498
V+ + + +S + +E+ +
Sbjct: 71 HKPECVSFGSTDRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAENGSSIEGATMYVTLS 130
Query: 499 TCDVCAKTLKFCHMCR 514
C CAK + + +
Sbjct: 131 PCPDCAKAIAQSGIKK 146
>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium
tuberculosis, TB, gene InhA [TaxId: 1773]}
Length = 268
Score = 29.3 bits (64), Expect = 1.4
Identities = 27/230 (11%), Positives = 62/230 (26%), Gaps = 1/230 (0%)
Query: 308 VGGPSNEHGILLAVFLFLVKHGAPLSLENNNRQKPLDLILEDTSLLNEIMEHAREYVTDL 367
V G + I + + GA L L +R + + I + ++E + L
Sbjct: 11 VSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHL 70
Query: 368 TNENNKVVTAISQLALDEKLLARRSSCQNVPVECAVCSELGVANVLLKPCNHAVACEECS 427
+ +V AI + ++ + + A+V A + +
Sbjct: 71 ASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMA 130
Query: 428 SRMKKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISEIEEMNTCTICME- 486
+ + I R +P +K + E + + +
Sbjct: 131 KALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAA 190
Query: 487 RCRNTIFLCGHGTCDVCAKTLKFCHMCRKLIEQRINISRAFVSPDQNGNT 536
T+ + + + + + +QR I T
Sbjct: 191 GPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKT 240
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 80
Score = 27.1 bits (59), Expect = 1.7
Identities = 6/39 (15%), Positives = 9/39 (23%), Gaps = 1/39 (2%)
Query: 474 EIEEMNTCTICMERCRNT-IFLCGHGTCDVCAKTLKFCH 511
+I + I E R I G +
Sbjct: 3 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV 41
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 56
Score = 26.3 bits (57), Expect = 1.9
Identities = 4/47 (8%), Positives = 10/47 (21%), Gaps = 2/47 (4%)
Query: 480 TCTICME--RCRNTIFLCGHGTCDVCAKTLKFCHMCRKLIEQRINIS 524
C I + R + + + ++I
Sbjct: 2 LCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIE 48
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain
{Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8
[TaxId: 37296]}
Length = 60
Score = 26.0 bits (56), Expect = 2.5
Identities = 12/57 (21%), Positives = 16/57 (28%), Gaps = 12/57 (21%)
Query: 476 EEMNTCTICMERCRNTIFL------CGHGTCDVCAKT------LKFCHMCRKLIEQR 520
E++ C IC E N F C T C +C + R
Sbjct: 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNTR 60
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 52
Score = 25.8 bits (56), Expect = 2.6
Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 7/47 (14%)
Query: 399 VECAVCSE---LGVANVLLKPCNHAVACEECSS----RMKKCIMCKT 438
VEC +C E + N C + + C C+
Sbjct: 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRK 47
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 78
Score = 26.2 bits (57), Expect = 3.3
Identities = 6/31 (19%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 474 EIEEMNTCTICMERCRNTIFL-CGHGTCDVC 503
E E C I +E ++ + + G
Sbjct: 4 EFPEYFRCPISLELMKDPVIVSTGQTYERSS 34
>d2b3za2 c.97.1.2 (A:1-145) Riboflavin biosynthesis protein RibD
{Bacillus subtilis [TaxId: 1423]}
Length = 145
Score = 26.8 bits (58), Expect = 5.1
Identities = 16/91 (17%), Positives = 25/91 (27%), Gaps = 3/91 (3%)
Query: 380 QLALDEKLLARRSSCQNVPVECAVCSELGVANVLLKPC---NHAVACEECSSRMKKCIMC 436
+LALD + N V V + + + HA +
Sbjct: 7 KLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGAD 66
Query: 437 KTFIEMRVTTDGRMVPGIERCDKSKIERVNY 467
+ G+ P E S I+RV
Sbjct: 67 IYVTLEPCSHYGKTPPCAELIINSGIKRVFV 97
>d2fug91 d.58.1.5 (9:26-179) NADH-quinone oxidoreductase chain 9,
Nqo9 {Thermus thermophilus [TaxId: 274]}
Length = 154
Score = 26.0 bits (56), Expect = 9.1
Identities = 10/59 (16%), Positives = 17/59 (28%)
Query: 430 MKKCIMCKTFIEMRVTTDGRMVPGIERCDKSKIERVNYLESKISEIEEMNTCTICMERC 488
++KCI C + P + Y + + C +C E C
Sbjct: 25 LEKCIGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEAC 83
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.401
Gapped
Lambda K H
0.267 0.0510 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,337,045
Number of extensions: 114082
Number of successful extensions: 688
Number of sequences better than 10.0: 1
Number of HSP's gapped: 519
Number of HSP's successfully gapped: 141
Length of query: 644
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 553
Effective length of database: 1,158,166
Effective search space: 640465798
Effective search space used: 640465798
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.9 bits)