RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy274
(187 letters)
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 118 bits (295), Expect = 4e-34
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
+EGQ+ + G L+ S+ +L++C K C G + GLE+E DY Y
Sbjct: 33 NVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSY--- 89
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
G C + K K++ + + L K GP+SV +N + FY +
Sbjct: 90 QGHMQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRP 149
Query: 121 NDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIETIAG 180
+CSP I HAVLLVGYG++ D+P+W +NSWG ++G++ + RG+ ACG+ T+A
Sbjct: 150 LRPLCSPWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMAS 209
Query: 181 YATID 185
A +D
Sbjct: 210 SAVVD 214
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 110 bits (276), Expect = 2e-31
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
LEGQ KTGKL+ S LV+C + GCGG G++SE YPY
Sbjct: 33 ALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQ 92
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
+ K G + + +K+ + + GP+SV ++ L F +
Sbjct: 93 E--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 150
Query: 121 NDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIETIA 179
DE C+ + + HAVL VGYG Q +W+ +NSWG ++G+ + R NNACGI +A
Sbjct: 151 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 210
Query: 180 GYATI 184
+ +
Sbjct: 211 SFPKM 215
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 102 bits (254), Expect = 8e-28
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGLEQPIEYTHQAGLESEKDYPYR 58
LE AI TGK++ ++ QLV+CA+ + GC G + + G+ E YPY+
Sbjct: 42 ALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK 101
Query: 59 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN-GHLIHFYNGTP 117
+ + + N E M + + Y P+S + Y
Sbjct: 102 GQDDHCKFQPDKA--IAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGI 159
Query: 118 IKKNDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIET 177
+P+ + HAVL VGYG+++ IPYW+ +NSWGP G+F IERG N CG+
Sbjct: 160 YSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAA 219
Query: 178 IAGY 181
A Y
Sbjct: 220 CASY 223
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 101 bits (252), Expect = 1e-27
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 6/186 (3%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCGGCDGLEQPIEYTHQAGLESEKDYPYR 58
+E Q+ + L S+ LV C K G + + I + + +E YPY
Sbjct: 33 NVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYA 92
Query: 59 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPI 118
+G G C V + L GP++V ++ Y G +
Sbjct: 93 SGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVM 152
Query: 119 KKNDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIETI 178
C + H VLLVGY +PYW+ +NSW +EG+ +I +G+N C ++
Sbjct: 153 TS----CVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEE 208
Query: 179 AGYATI 184
A A +
Sbjct: 209 ASSAVV 214
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 101 bits (252), Expect = 1e-27
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP---IEYTHQAGLESEKDYPY 57
LE Q +KTGKLV S LV+C+ + G GC+G G++S+ YPY
Sbjct: 33 ALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPY 92
Query: 58 RNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTP 117
+ + + K + + L + + +K+ + GP+SVG++ F+
Sbjct: 93 KAMD--QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRS 150
Query: 118 IKKNDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIE 176
+ C+ N + H VL+VGYG + YWL +NSWG +EG+ ++ R N CGI
Sbjct: 151 GVYYEPSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIA 209
Query: 177 TIAGYATI 184
+ Y I
Sbjct: 210 SFPSYPEI 217
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 102 bits (254), Expect = 3e-27
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGLEQPIEYTHQAGLESEKDYPYR 58
LEGQ KTG+L+ S+ LV+C+ GC G GL+SE+ YPY
Sbjct: 129 ALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPY- 187
Query: 59 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPI 118
+ C Y+ + + K + GP+SV ++ F
Sbjct: 188 --EATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEG 245
Query: 119 KKNDEICSPNAIGHAVLLVGYG----KQDDIPYWLARNSWGPIGPDEGFFKIERG-NNAC 173
+ CS + H VL+VGYG + D+ YWL +NSWG G+ K+ + N C
Sbjct: 246 IYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHC 305
Query: 174 GIETIAGYATI 184
GI + A Y T+
Sbjct: 306 GIASAASYPTV 316
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 98.9 bits (245), Expect = 2e-26
Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 10/193 (5%)
Query: 1 MLEGQYAIKTG--KLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPY- 57
MLE + I T + S ++V C++ GC G +Y GL E +PY
Sbjct: 36 MLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYT 95
Query: 58 -RNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGT 116
+ + + + + F MK L +GP++V + +
Sbjct: 96 GTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKK 155
Query: 117 PIKKNDEI----CSPNAIGHAVLLVGYG--KQDDIPYWLARNSWGPIGPDEGFFKIERGN 170
I + + HAVLLVGYG + YW+ +NSWG + G+F+I RG
Sbjct: 156 GIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT 215
Query: 171 NACGIETIAGYAT 183
+ C IE+IA AT
Sbjct: 216 DECAIESIAVAAT 228
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 97.8 bits (242), Expect = 2e-25
Identities = 33/184 (17%), Positives = 57/184 (30%), Gaps = 3/184 (1%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
E Y + ++ ++ +LV+CA Q G + IEY G+ E Y Y
Sbjct: 119 ATESAYLAYRDQSLDLAEQELVDCASQHGCHGDTI--PRGIEYIQHNGVVQESYYRYVAR 176
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
+ + + + N + + +G+ +
Sbjct: 177 EQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYD-GRTI 235
Query: 121 NDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIETIAG 180
HAV +VGY + YW+ RNSW D G+ + IE
Sbjct: 236 IQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPY 295
Query: 181 YATI 184
+
Sbjct: 296 VVIL 299
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 95.4 bits (236), Expect = 4e-25
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 21/199 (10%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
+E QYAI+ KL+ S+ +LV+C+ + GC G + G+ + DYPY +
Sbjct: 50 SVESQYAIRKNKLITLSEQELVDCSFKNYGCNGGLINNAFEDMIELGGICPDGDYPYVSD 109
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
K + +K+ L GP+S+ + + I
Sbjct: 110 APNLCNIDRCTEKYGIKNYLSVPD----NKLKEALRFLGPISISVAVSDDFAFYKEGIFD 165
Query: 121 NDEICSPNAIGHAVLLVGYG----------KQDDIPYWLARNSWGPIGPDEGFFKIERGN 170
+ + HAV+LVG+G K + Y++ +NSWG + GF IE
Sbjct: 166 G---ECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDE 222
Query: 171 NA----CGIETIAGYATID 185
+ CG+ T A I+
Sbjct: 223 SGLMRKCGLGTDAFIPLIE 241
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 93.5 bits (231), Expect = 1e-24
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 9/187 (4%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
+EG I TG L+ S+ QLV+C GC G + G+ SE+ YPYR
Sbjct: 33 AVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYR-- 90
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
G+ C + + + +E + P+SV ++ F
Sbjct: 91 -GQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIF 149
Query: 121 NDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG----NNACGIE 176
+ HA+ +VGYG ++D +W+ +NSWG + G+ + ER + CGI
Sbjct: 150 TG--SCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGIT 207
Query: 177 TIAGYAT 183
A Y
Sbjct: 208 RFASYPV 214
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 93.1 bits (230), Expect = 4e-24
Identities = 48/216 (22%), Positives = 74/216 (34%), Gaps = 35/216 (16%)
Query: 1 MLEGQYAIKTGKLV--EFSKSQLVECAKQCSGCGGCDGL-EQPIEYTHQAGLESEKDYPY 57
+ + I T V E S L+ C G G G + + + GL S Y
Sbjct: 38 AISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYES 97
Query: 58 RNG-------------NGEKFKCAYDK-----------------SKVKLFTGKDFLYFNG 87
G NG + C + + K + + N
Sbjct: 98 HVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNS 157
Query: 88 SETMKKILYKYGPLSVGLNGHLIHFYNGTPIKKNDEICSPNAIGHAVLLVGYGKQDDIPY 147
+ + +YK GP+ + + + GHA+ ++G+G ++ PY
Sbjct: 158 EKDIMAEIYKNGPVEGAFSVYSDFLLYK--SGVYQHVTGEMMGGHAIRILGWGVENGTPY 215
Query: 148 WLARNSWGPIGPDEGFFKIERGNNACGIETIAGYAT 183
WL NSW D GFFKI RG + CGIE+
Sbjct: 216 WLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGI 251
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 90.1 bits (222), Expect = 2e-23
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSG--CGGCDGLEQPIEYTHQAGLESEKDYPYR 58
+EG I TG L+ S+ +L++C + + C G + + G+ +E++YPY
Sbjct: 33 TVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYT 92
Query: 59 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPI 118
+GE ++ V + T ++ Y +E + Y P+SV L+ F +
Sbjct: 93 AQDGECNVDLQNEKYVTIDTYENVPY--NNEWALQTAVTYQPVSVALDAAGDAFKQYSSG 150
Query: 119 KKNDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER---GNNACGI 175
AI HAV +VGYG + I YW+ +NSW +EG+ +I R G CGI
Sbjct: 151 IFTGPCG--TAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGI 208
Query: 176 ETIAGYAT 183
T+ Y
Sbjct: 209 ATMPSYPV 216
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 90.1 bits (222), Expect = 8e-23
Identities = 40/202 (19%), Positives = 68/202 (33%), Gaps = 22/202 (10%)
Query: 1 MLEGQYAIKTGKL---VEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPY 57
+ + IK S +++C S GG D + H E+ +Y
Sbjct: 72 AMADRINIKRKGAWPSTLLSVQNVIDCGNAGSCEGGNDLSVWDYAHQHGIPDETCNNYQA 131
Query: 58 RNGNGE---------KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGH 108
++ + +FK + L+ D+ +G E M +Y GP+S G+
Sbjct: 132 KDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMAT 191
Query: 109 LIHFYNGTPIKKNDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 168
I + + H V + G+G D YW+ RNSWG + G+ +I
Sbjct: 192 ERLANYTGGIYAEYQDTTYI--NHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVT 249
Query: 169 G--------NNACGIETIAGYA 182
IE +
Sbjct: 250 STYKDGKGARYNLAIEEHCTFG 271
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 88.5 bits (218), Expect = 1e-22
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
+EG I TG L+E S+ +LV+C K GC ++Y G+ + K YPY+
Sbjct: 33 TVEGINKIVTGNLLELSEQELVDCDKHSYGCK-GGYQTTSLQYVANNGVHTSKVYPYQAK 91
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
+ KVK+ K + ET PLSV + F
Sbjct: 92 QYKCRATDKPGPKVKITGYKR--VPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVF 149
Query: 121 NDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG----NNACGIE 176
+ + HAV VGYG D Y + +NSWGP ++G+ +++R CG+
Sbjct: 150 DGPCG--TKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVY 207
Query: 177 TIAGY 181
+ Y
Sbjct: 208 KSSYY 212
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 87.4 bits (215), Expect = 3e-22
Identities = 48/189 (25%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
+EG I+TGKLVE S+ +LV+C ++ S +EY + G+ YPY+
Sbjct: 33 TVEGINKIRTGKLVELSEQELVDC-ERRSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAK 91
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
A + T +E P+SV + F
Sbjct: 92 Q--GTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIF 149
Query: 121 NDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG----NNACGIE 176
+ HAV VGYGK Y L +NSWG ++G+ +I+R CG+
Sbjct: 150 EGPCG--TKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLY 207
Query: 177 TIAGYATID 185
+ Y T +
Sbjct: 208 KSSYYPTKN 216
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 87.0 bits (214), Expect = 4e-22
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 13/185 (7%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
+E I+TG L+ S+ +LV+C K+ GC G + + G++++ +YPY+
Sbjct: 33 TVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYIINNGGIDTQANYPYKAV 92
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
G C KV G + + F +K+ + + I
Sbjct: 93 QG---PCQAAS-KVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFS 148
Query: 121 NDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER--GNNACGIETI 178
N H V +VGY YW+ RNSWG ++G+ ++ R G CGI +
Sbjct: 149 GPCGTKLN---HGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARL 201
Query: 179 AGYAT 183
Y T
Sbjct: 202 PYYPT 206
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 86.2 bits (212), Expect = 7e-22
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 10/187 (5%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
+E I+TG+L+ S+ +LV+C GC G G++++++YPY
Sbjct: 33 AVESINKIRTGQLISLSEQELVDCDTASHGCNGGWMNNAFQYIITNGGIDTQQNYPY--- 89
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
+ + C + +V G + N ++ + + + I
Sbjct: 90 SAVQGSCKPYRLRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFT 149
Query: 121 NDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG----NNACGIE 176
+ N H V++VGYG Q YW+ RNSWG ++G+ +ER CGI
Sbjct: 150 GPCGTAQN---HGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIA 206
Query: 177 TIAGYAT 183
+ Y T
Sbjct: 207 QLPSYPT 213
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 85.1 bits (209), Expect = 2e-21
Identities = 54/189 (28%), Positives = 80/189 (42%), Gaps = 5/189 (2%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
LEGQ KTGKLV S+ LV+C++ G G + + + Y
Sbjct: 33 ALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYV 92
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
++ ++ V TG + + + K + GP+SV ++ F
Sbjct: 93 AVDEICKYRPENSVAQDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIY 152
Query: 121 NDEICSPNAIGHAVLLVGY----GKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGI 175
+ CS + H VL+VGY D+ YWL +NSWGP G+ KI + NN CGI
Sbjct: 153 FEPDCSSKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGI 212
Query: 176 ETIAGYATI 184
T A Y +
Sbjct: 213 ATAASYPNV 221
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 80.4 bits (197), Expect = 2e-19
Identities = 42/188 (22%), Positives = 69/188 (36%), Gaps = 8/188 (4%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
+EG IKT KLV S+ +LV+C + ++ E+ Q G + +
Sbjct: 34 AVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEA 93
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
+ + + G + + N + K + G + +
Sbjct: 94 YDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFT 153
Query: 121 NDEICSPNAIGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGFFKIERG----NNACGI 175
+ H V +VGYG D YW +NSWGP ++G+ ++ERG CGI
Sbjct: 154 G---SCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGI 210
Query: 176 ETIAGYAT 183
A Y
Sbjct: 211 AMEASYPI 218
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 80.1 bits (196), Expect = 2e-19
Identities = 45/189 (23%), Positives = 70/189 (37%), Gaps = 13/189 (6%)
Query: 1 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 60
+EG I+TG L E+S+ +L++C ++ GC ++ Q G+ YPY
Sbjct: 33 TIEGIIKIRTGNLNEYSEQELLDCDRRSYGCN-GGYPWSALQLVAQYGIHYRNTYPYEGV 91
Query: 61 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNGHLIHFYNGTPIKK 120
K + +N + P+SV L F
Sbjct: 92 QRYCRSREKGPYAAKTDGVRQVQPYNEGALLY--SIANQPVSVVLEAAGKDFQLYRGGIF 149
Query: 121 NDEICSPNAIGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA----CGIE 176
+ HAV VGYG Y L +NSWG + G+ +I+RG CG+
Sbjct: 150 VGPCGNKV--DHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLY 203
Query: 177 TIAGYATID 185
T + Y +
Sbjct: 204 TSSFYPVKN 212
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 40.3 bits (94), Expect = 5e-05
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 132 HAVLLVGYGKQDD---IPYWLARNSWGPIGPDEGFFKI 166
HA+L+ G + + NSWG +G + +
Sbjct: 374 HAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVM 411
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 38.3 bits (89), Expect = 3e-04
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Query: 132 HAVLLVGYGKQDD----IPYWLARNSWGPIGPDEGFF 164
HA+ ++DD W NSWG +G+
Sbjct: 371 HAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYL 407
>d1k4ta2 d.163.1.2 (A:431-640,A:713-765) Eukaryotic DNA
topoisomerase I, catalytic core {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 27.9 bits (62), Expect = 0.69
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 67 CAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGP 100
+ + ++ T K F +N S T+++ L +
Sbjct: 144 NKHLQDLMEGLTAKVFRTYNASITLQQQLKELTA 177
>d1u89a1 a.216.1.1 (A:752-889) Talin 1 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 138
Score = 26.4 bits (58), Expect = 1.4
Identities = 5/23 (21%), Positives = 13/23 (56%)
Query: 8 IKTGKLVEFSKSQLVECAKQCSG 30
+ K++ + +++VE AK +
Sbjct: 106 LSAAKILADATAKMVEAAKGAAA 128
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.140 0.440
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 749,232
Number of extensions: 35896
Number of successful extensions: 133
Number of sequences better than 10.0: 1
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 27
Length of query: 187
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 107
Effective length of database: 1,309,196
Effective search space: 140083972
Effective search space used: 140083972
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.8 bits)