Query psy2747
Match_columns 557
No_of_seqs 456 out of 1956
Neff 6.9
Searched_HMMs 29240
Date Sat Aug 17 00:09:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2747.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2747hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t6p_A Baculoviral IAP repeat- 100.0 5.4E-38 1.9E-42 326.7 4.2 312 223-557 2-345 (345)
2 2i3h_A Baculoviral IAP repeat- 99.9 4.2E-28 1.5E-32 216.6 6.9 96 384-479 36-131 (133)
3 3hl5_A Baculoviral IAP repeat- 99.9 5.9E-28 2E-32 205.5 7.4 91 385-477 3-93 (95)
4 1jd5_A DIAP1, apoptosis 1 inhi 99.9 7E-28 2.4E-32 213.4 7.5 94 384-477 14-107 (124)
5 2vm5_A Baculoviral IAP repeat- 99.9 1.1E-27 3.9E-32 207.3 5.4 94 385-478 10-104 (106)
6 2poi_A Baculoviral IAP repeat- 99.9 3.5E-27 1.2E-31 199.9 7.5 74 1-74 18-91 (94)
7 3mup_A Baculoviral IAP repeat- 99.9 2.6E-27 8.9E-32 209.6 6.6 96 386-481 10-105 (122)
8 3d9t_A Baculoviral IAP repeat- 99.9 3.9E-27 1.3E-31 201.3 6.9 91 388-478 6-96 (97)
9 1g73_C Inhibitors of apoptosis 99.9 7.4E-27 2.5E-31 206.6 6.8 94 385-480 17-110 (121)
10 2qra_D XIAP, baculoviral IAP r 99.9 1.2E-26 4.1E-31 201.4 7.4 74 1-74 35-108 (111)
11 3m1d_A Baculoviral IAP repeat- 99.9 4.8E-27 1.6E-31 195.7 3.9 73 1-73 9-81 (85)
12 3siq_A Apoptosis 1 inhibitor; 99.9 2E-26 6.7E-31 205.9 7.9 82 1-84 34-115 (136)
13 2qfa_A Baculoviral IAP repeat- 99.9 1.9E-27 6.6E-32 217.0 1.2 75 1-75 12-91 (142)
14 3hl5_A Baculoviral IAP repeat- 99.9 2.9E-26 1E-30 195.0 7.5 86 221-308 8-93 (95)
15 1se0_A Apoptosis 1 inhibitor; 99.9 3.6E-26 1.2E-30 200.7 8.0 83 1-85 12-94 (116)
16 2i3h_A Baculoviral IAP repeat- 99.9 4.8E-26 1.6E-30 203.4 6.8 89 220-308 41-129 (133)
17 2qfa_A Baculoviral IAP repeat- 99.9 8E-27 2.7E-31 212.9 1.2 120 131-250 6-140 (142)
18 3d9t_A Baculoviral IAP repeat- 99.9 5.2E-26 1.8E-30 194.3 6.0 87 221-307 8-94 (97)
19 1jd5_A DIAP1, apoptosis 1 inhi 99.9 8.5E-26 2.9E-30 200.1 6.3 88 220-307 19-106 (124)
20 2poi_A Baculoviral IAP repeat- 99.9 1.4E-25 4.7E-30 190.2 7.2 75 135-209 16-90 (94)
21 1i4o_C X-linked IAP, baculovir 99.9 9E-26 3.1E-30 204.2 6.2 81 1-83 41-121 (141)
22 3m1d_A Baculoviral IAP repeat- 99.9 9.2E-26 3.1E-30 188.0 5.0 77 219-295 4-80 (85)
23 3mup_A Baculoviral IAP repeat- 99.9 1.6E-25 5.3E-30 198.2 6.6 88 221-308 14-101 (122)
24 2vm5_A Baculoviral IAP repeat- 99.9 4.8E-26 1.6E-30 197.2 3.2 83 220-302 14-97 (106)
25 1i4o_C X-linked IAP, baculovir 99.9 3.1E-25 1.1E-29 200.7 8.0 104 189-295 9-112 (141)
26 1g73_C Inhibitors of apoptosis 99.9 2.4E-25 8.2E-30 196.9 6.9 86 221-308 22-107 (121)
27 2qra_D XIAP, baculoviral IAP r 99.9 4.5E-25 1.5E-29 191.6 7.1 75 135-209 33-107 (111)
28 3siq_A Apoptosis 1 inhibitor; 99.9 7.5E-25 2.6E-29 195.7 8.3 74 221-295 31-104 (136)
29 1se0_A Apoptosis 1 inhibitor; 99.9 1.4E-24 4.6E-29 190.7 8.5 73 222-295 10-82 (116)
30 3t6p_A Baculoviral IAP repeat- 99.9 9E-23 3.1E-27 212.2 7.2 89 392-480 2-90 (345)
31 2yho_A E3 ubiquitin-protein li 99.5 5E-14 1.7E-18 115.8 6.1 64 494-557 5-68 (79)
32 4ic3_A E3 ubiquitin-protein li 99.4 1.1E-13 3.8E-18 112.2 6.1 65 493-557 10-74 (74)
33 2vje_B MDM4 protein; proto-onc 99.3 2.4E-13 8.2E-18 106.8 2.7 52 506-557 6-63 (63)
34 2ecg_A Baculoviral IAP repeat- 99.3 2.9E-13 9.8E-18 110.0 2.6 63 495-557 13-75 (75)
35 2ea5_A Cell growth regulator w 99.3 3.6E-13 1.2E-17 107.4 2.6 52 506-557 14-65 (68)
36 2vje_A E3 ubiquitin-protein li 99.3 4.8E-13 1.7E-17 105.4 2.0 52 506-557 7-64 (64)
37 4ayc_A E3 ubiquitin-protein li 98.3 5.6E-07 1.9E-11 81.2 4.7 49 503-552 49-101 (138)
38 2d8t_A Dactylidin, ring finger 98.2 5.6E-07 1.9E-11 71.5 3.1 44 506-550 14-61 (71)
39 2xeu_A Ring finger protein 4; 98.2 3.5E-07 1.2E-11 70.7 1.7 49 507-556 3-64 (64)
40 1chc_A Equine herpes virus-1 r 98.2 3.5E-07 1.2E-11 71.8 1.6 49 506-555 4-57 (68)
41 2ecn_A Ring finger protein 141 98.2 1.3E-07 4.5E-12 74.9 -1.3 50 505-556 13-66 (70)
42 2ysl_A Tripartite motif-contai 98.1 8.6E-07 2.9E-11 70.6 2.1 45 505-550 18-69 (73)
43 3ng2_A RNF4, snurf, ring finge 98.1 4.3E-07 1.5E-11 71.9 -0.0 50 506-556 9-71 (71)
44 2ecm_A Ring finger and CHY zin 98.0 1.5E-06 5.1E-11 65.2 2.3 44 506-550 4-55 (55)
45 3fl2_A E3 ubiquitin-protein li 98.0 2.8E-06 9.6E-11 75.0 3.8 54 496-550 41-99 (124)
46 2y1n_A E3 ubiquitin-protein li 98.0 4.4E-06 1.5E-10 87.5 5.5 49 507-556 332-385 (389)
47 2ea6_A Ring finger protein 4; 98.0 1.2E-06 4.1E-11 68.7 0.9 45 505-550 13-68 (69)
48 2csy_A Zinc finger protein 183 98.0 2.3E-06 7.8E-11 69.7 2.5 45 506-551 14-62 (81)
49 1iym_A EL5; ring-H2 finger, ub 98.0 2.5E-06 8.5E-11 64.0 2.1 43 506-549 4-54 (55)
50 1bor_A Transcription factor PM 98.0 2.1E-06 7.1E-11 65.2 1.6 44 506-550 5-49 (56)
51 2djb_A Polycomb group ring fin 97.9 2.4E-06 8.2E-11 68.0 1.9 46 505-551 13-63 (72)
52 2egp_A Tripartite motif-contai 97.9 2.4E-06 8.3E-11 68.9 1.7 45 505-550 10-65 (79)
53 1jm7_A BRCA1, breast cancer ty 97.9 3.5E-06 1.2E-10 72.7 2.5 53 497-550 11-70 (112)
54 2ct2_A Tripartite motif protei 97.9 3.2E-06 1.1E-10 69.6 1.8 45 505-550 13-68 (88)
55 3lrq_A E3 ubiquitin-protein li 97.9 5.7E-06 1.9E-10 70.4 3.1 51 499-550 14-70 (100)
56 2kiz_A E3 ubiquitin-protein li 97.9 3.9E-06 1.3E-10 66.1 1.9 46 506-552 13-65 (69)
57 2ecw_A Tripartite motif-contai 97.9 4.7E-06 1.6E-10 67.9 2.4 45 505-550 17-71 (85)
58 1g25_A CDK-activating kinase a 97.9 3.3E-06 1.1E-10 65.7 1.3 43 507-550 3-55 (65)
59 2ecy_A TNF receptor-associated 97.8 2.3E-06 7.9E-11 66.9 0.2 45 505-550 13-62 (66)
60 2ep4_A Ring finger protein 24; 97.8 2.4E-06 8.3E-11 68.2 0.2 48 505-553 13-67 (74)
61 2y43_A E3 ubiquitin-protein li 97.8 6.5E-06 2.2E-10 69.6 2.7 49 501-550 16-69 (99)
62 2ckl_A Polycomb group ring fin 97.8 9.2E-06 3.1E-10 69.9 3.6 49 501-550 9-62 (108)
63 2ect_A Ring finger protein 126 97.8 4.2E-06 1.4E-10 67.5 1.3 44 506-550 14-64 (78)
64 2ecv_A Tripartite motif-contai 97.8 4.2E-06 1.4E-10 68.1 1.3 45 505-550 17-71 (85)
65 1z6u_A NP95-like ring finger p 97.8 8E-06 2.7E-10 74.8 3.1 49 501-550 72-125 (150)
66 2l0b_A E3 ubiquitin-protein li 97.8 5.2E-06 1.8E-10 69.4 1.3 44 506-550 39-89 (91)
67 1x4j_A Ring finger protein 38; 97.8 5.3E-06 1.8E-10 66.5 1.2 44 506-550 22-72 (75)
68 2yur_A Retinoblastoma-binding 97.8 7.2E-06 2.5E-10 65.7 1.7 44 505-549 13-63 (74)
69 1jm7_B BARD1, BRCA1-associated 97.7 1.3E-05 4.4E-10 70.1 3.1 51 498-549 13-66 (117)
70 1e4u_A Transcriptional repress 97.7 4.2E-06 1.4E-10 68.1 -0.1 47 505-552 9-64 (78)
71 3l11_A E3 ubiquitin-protein li 97.7 1.3E-05 4.3E-10 69.8 3.0 44 506-550 14-62 (115)
72 3ztg_A E3 ubiquitin-protein li 97.6 1.3E-05 4.4E-10 66.7 1.3 43 505-548 11-60 (92)
73 1t1h_A Gspef-atpub14, armadill 97.6 1.6E-05 5.3E-10 64.1 1.5 45 505-550 6-55 (78)
74 1rmd_A RAG1; V(D)J recombinati 97.6 2.9E-05 1E-09 67.5 2.9 46 504-550 20-70 (116)
75 2ckl_B Ubiquitin ligase protei 97.5 2E-05 7E-10 72.9 1.6 46 504-550 51-102 (165)
76 2ecj_A Tripartite motif-contai 97.5 1.8E-05 6E-10 59.8 0.5 39 505-544 13-58 (58)
77 2ysj_A Tripartite motif-contai 97.5 2.6E-05 8.9E-10 60.1 1.5 39 505-544 18-63 (63)
78 3hct_A TNF receptor-associated 97.5 3E-05 1E-09 67.8 1.9 45 505-550 16-65 (118)
79 4ap4_A E3 ubiquitin ligase RNF 97.3 5.6E-05 1.9E-09 66.6 1.9 50 506-556 71-133 (133)
80 4ap4_A E3 ubiquitin ligase RNF 97.3 6E-05 2E-09 66.4 1.9 44 506-550 6-60 (133)
81 2ecl_A Ring-box protein 2; RNF 97.3 8.3E-05 2.8E-09 60.6 2.2 43 507-550 15-76 (81)
82 1v87_A Deltex protein 2; ring- 97.3 6.4E-05 2.2E-09 65.0 1.2 43 507-550 25-94 (114)
83 3knv_A TNF receptor-associated 97.0 5.9E-05 2E-09 68.3 -1.9 45 503-548 27-76 (141)
84 3hcs_A TNF receptor-associated 96.8 0.00035 1.2E-08 64.8 1.9 45 505-550 16-65 (170)
85 3dpl_R Ring-box protein 1; ubi 96.7 0.00063 2.2E-08 58.5 2.3 29 520-549 68-100 (106)
86 2kr4_A Ubiquitin conjugation f 96.7 0.0007 2.4E-08 55.6 2.4 45 505-550 12-60 (85)
87 2kre_A Ubiquitin conjugation f 96.6 0.00079 2.7E-08 57.2 2.4 45 505-550 27-75 (100)
88 3vk6_A E3 ubiquitin-protein li 96.6 0.0014 4.6E-08 55.2 3.5 44 510-555 4-54 (101)
89 1wgm_A Ubiquitin conjugation f 96.6 0.00091 3.1E-08 56.6 2.5 45 505-550 20-69 (98)
90 2c2l_A CHIP, carboxy terminus 96.2 0.0016 5.3E-08 64.6 2.3 44 506-550 207-255 (281)
91 4a0k_B E3 ubiquitin-protein li 96.1 0.001 3.5E-08 58.2 -0.0 29 520-549 79-111 (117)
92 2f42_A STIP1 homology and U-bo 95.3 0.0065 2.2E-07 57.0 2.5 44 506-550 105-153 (179)
93 2d8s_A Cellular modulator of i 95.2 0.0072 2.5E-07 49.1 1.9 44 506-550 14-70 (80)
94 2yu4_A E3 SUMO-protein ligase 95.1 0.012 4E-07 49.1 3.0 41 506-547 6-59 (94)
95 1wim_A KIAA0161 protein; ring 94.9 0.0052 1.8E-07 51.1 0.3 40 507-547 5-61 (94)
96 3htk_C E3 SUMO-protein ligase 92.4 0.039 1.3E-06 54.6 1.5 45 505-550 179-232 (267)
97 2bay_A PRE-mRNA splicing facto 89.0 0.2 6.7E-06 38.2 2.3 43 507-550 3-50 (61)
98 1vyx_A ORF K3, K3RING; zinc-bi 81.4 0.29 1E-05 37.1 0.0 44 506-549 5-58 (60)
99 2ko5_A Ring finger protein Z; 71.3 0.85 2.9E-05 37.7 0.1 46 507-554 28-77 (99)
100 2jun_A Midline-1; B-BOX, TRIM, 58.3 3.1 0.00011 34.2 1.1 31 506-537 2-35 (101)
101 3k1l_B Fancl; UBC, ring, RWD, 55.5 1.9 6.5E-05 44.2 -0.8 44 506-550 307-373 (381)
102 1ef4_A Subunit N, DNA-directed 50.6 2.2 7.7E-05 31.7 -0.9 12 39-50 4-15 (55)
103 2ct0_A Non-SMC element 1 homol 50.2 13 0.00043 29.3 3.4 43 507-550 15-64 (74)
104 4ayb_N DNA-directed RNA polyme 47.3 2.8 9.7E-05 32.4 -0.8 12 39-50 5-16 (66)
105 1twf_J DNA-directed RNA polyme 46.9 4.1 0.00014 31.9 -0.0 12 39-50 5-16 (70)
106 2cs3_A Protein C14ORF4, MY039 25.3 14 0.00049 29.5 -0.1 30 507-537 15-48 (93)
107 1a6b_B Momulv, zinc finger pro 24.6 17 0.00059 25.1 0.2 14 34-47 6-19 (40)
No 1
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=100.00 E-value=5.4e-38 Score=326.73 Aligned_cols=312 Identities=29% Similarity=0.447 Sum_probs=196.6
Q ss_pred ccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCccccccchhhh
Q psy2747 223 VYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLARDNQATQ 302 (557)
Q Consensus 223 ~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~~~~~~~~ 302 (557)
.|.++++||+||.+||+...++|++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|+|+|++..||+.+
T Consensus 2 ~m~~~~~Rl~tF~~WP~~~~~~~~~lA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~f~~~~kg~~~ 81 (345)
T 3t6p_A 2 SMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFSCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEF 81 (345)
T ss_dssp TTSSHHHHHHHGGGSCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHHHCHHH
T ss_pred CCccHHHHHHHHhhCCCcccCCHHHHHhCCCeecCCCCeEEecCCCCCccCCCCCCCHHHHHHHhCCCCccHHHhccHHH
Confidence 58899999999999998877799999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhhc--ccCCCCCC-CccCCCCCCCCcccchhhhhhhhcCccccccC------CCcccccchhhhhcccccccccC
Q psy2747 303 ANMINLRA--LDAKDPGC-PFVKNPEASGNVSIENEEVYKLESGRLATFNN------WPVSFIVTPEALAKTGFYYLKQG 373 (557)
Q Consensus 303 ~~~~~~~~--~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 373 (557)
.+.|.... +..+.+.. ++++.. .|....... ..+.++.|..+. ..+ +.++..++..+|..|..
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~v~~~l~mGf~~~~v-~~~~~~~~~~~g~~~~~-- 153 (345)
T 3t6p_A 82 VDEIQGRYPHLLEQLLSTPPIIHYG--PGESSSEDA---VMMNTPVVKSALEMGFNRDLV-KQTVQSKILTTGENYKT-- 153 (345)
T ss_dssp HHHHHHHSTTHHHHHHHC---------------CCC---GGGCSHHHHHHHHTTCCHHHH-HHHHHHHHHHHSSCCCS--
T ss_pred HHHHHHhCcccccccccCccccccC--Cccchhhhh---hhhcCHHHHHHHHhcccHHHH-HHHHHHHHHhcCCCcCC--
Confidence 88776541 11000000 111100 010000000 011111111000 000 11223333333311100
Q ss_pred CccccccccccCCCCCCCCCcChHhHhhhccCCCCCCCCChhHhhhcCccccCCCCeEEEEecCCceeeccCCCCcHHHH
Q psy2747 374 DKDMRDLGVQNHRVPKHPNLSTLDSRVLTFTTWPRDSPLGPQSLAVAGFFYDGQGDWVRCFHCDGGLRKWTAMDEPWSEH 453 (557)
Q Consensus 374 ~~~~~~~~~~~~~~p~~p~~~~~~~Rl~Sf~~wp~~~~~~~~~LA~AGFfy~g~~D~v~Cf~Cg~~l~~w~~~Ddpw~eH 453 (557)
++++-. .+ ....+=...+.+-..+..+-. ..++...+.+|+||.. +.|...|.+|...+.+|.++
T Consensus 154 ---~~~lv~-~~--l~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~ra~l~~~--------~~~v~pild~lle~~vis~~ 218 (345)
T 3t6p_A 154 ---VNDIVS-AL--LNAEDEKREEEKEKQAEEMAS-DDLSLIRKNRMALFQQ--------LTCVLPILDNLLKANVINKQ 218 (345)
T ss_dssp ---HHHHHH-HH--HHHHHHHHHHHHHHHHSCCCC-HHHHHHHHTHHHHHHH--------CCCCHHHHHHHHHTTSSCHH
T ss_pred ---HHHHHH-HH--Hhcccccchhhhhhhhccccc-ccchHHHHHHHHHhhc--------cccccccccccccccccchh
Confidence 000000 00 000000000000111222211 1224567888998876 45778889999999999999
Q ss_pred hhhcCCcchhhhhhhhhHHHhhhhcC---------------CCC--------CCCccCCCcccccChHHHHHHHHhcccc
Q psy2747 454 ARWFPECHFVMLVKGEQFIEDTIKAN---------------PPI--------TDEVFFTPKFFVKSLEEEVRRLREARLC 510 (557)
Q Consensus 454 ~~~~p~C~fv~~~kG~~fv~~v~~~~---------------~~~--------~~e~~~~~~~~~~~~~~~~~~~~~~~~C 510 (557)
.++.....+.....+.+.+..++... +.+ +....+.......+++++++.+.+...|
T Consensus 219 e~dv~~~~~~~~~~~r~li~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~C 298 (345)
T 3t6p_A 219 EHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNSLKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTC 298 (345)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHTSCCCCCCCSSCGGGSCHHHHHHHHHTTCBC
T ss_pred hhhhhhhHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHhccchhhhhhhccccccccCCccccccccHHHHHHhCcCCCCC
Confidence 99988887766665554444332221 000 0000011123356788999999999999
Q ss_pred ccccccccceEEecCCccccchhhhcCCCCCCCCccccccEEEEeeC
Q psy2747 511 KICMDKEVGVVLLPCGHLVTCVLCASSLPRCPVCRENIKATVRTFLS 557 (557)
Q Consensus 511 ~IC~~~~~~~~~~PCgH~~~C~~Ca~~~~~CP~CR~~i~~~i~i~~s 557 (557)
.||++...+.+++||||.++|..|+..+..||+||.+|...++||+|
T Consensus 299 ~IC~~~~~~~v~lpCgH~~fC~~C~~~~~~CP~CR~~i~~~~~i~~s 345 (345)
T 3t6p_A 299 KVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTFLS 345 (345)
T ss_dssp TTTSSSBCCEEEETTCCEEECTTTGGGCSBCTTTCCBCCEEEECC--
T ss_pred CccCCcCCceEEcCCCChhHhHHHHhcCCcCCCCCCCccCeEEeecC
Confidence 99999999999999999999999999999999999999999999987
No 2
>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3uw5_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A*
Probab=99.94 E-value=4.2e-28 Score=216.60 Aligned_cols=96 Identities=41% Similarity=0.942 Sum_probs=87.4
Q ss_pred cCCCCCCCCCcChHhHhhhccCCCCCCCCChhHhhhcCccccCCCCeEEEEecCCceeeccCCCCcHHHHhhhcCCcchh
Q psy2747 384 NHRVPKHPNLSTLDSRVLTFTTWPRDSPLGPQSLAVAGFFYDGQGDWVRCFHCDGGLRKWTAMDEPWSEHARWFPECHFV 463 (557)
Q Consensus 384 ~~~~p~~p~~~~~~~Rl~Sf~~wp~~~~~~~~~LA~AGFfy~g~~D~v~Cf~Cg~~l~~w~~~Ddpw~eH~~~~p~C~fv 463 (557)
....|.+|+|.++++||+||.+||....+++++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|.|.|+
T Consensus 36 ~~~~~~~~~m~~e~~RL~SF~~WP~~~~~~pe~LA~AGFYYtg~~D~V~Cf~C~~~L~~We~~DDP~~EH~r~~P~C~Fv 115 (133)
T 2i3h_A 36 LSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPGCQFL 115 (133)
T ss_dssp ---CCSCGGGCCHHHHHHTTTTCSCTTTSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCHHH
T ss_pred cCCCCCchhhhCHHHHHHHHhcCCCCcCCCHHHHHHcCCCCcCCCCEEEecccCCEeCCCCCCCCHHHHHHHHCcCCcee
Confidence 34568999999999999999999987778899999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhhcC
Q psy2747 464 MLVKGEQFIEDTIKAN 479 (557)
Q Consensus 464 ~~~kG~~fv~~v~~~~ 479 (557)
++.||.+||++++...
T Consensus 116 ~~~Kg~~fv~~v~~~~ 131 (133)
T 2i3h_A 116 LRSKGQEYINNIHLTH 131 (133)
T ss_dssp HHHHCHHHHHHHC---
T ss_pred hhcccHHHHHHHhhhC
Confidence 9999999999997654
No 3
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=99.94 E-value=5.9e-28 Score=205.52 Aligned_cols=91 Identities=38% Similarity=1.028 Sum_probs=86.4
Q ss_pred CCCCCCCCCcChHhHhhhccCCCCCCCCChhHhhhcCccccCCCCeEEEEecCCceeeccCCCCcHHHHhhhcCCcchhh
Q psy2747 385 HRVPKHPNLSTLDSRVLTFTTWPRDSPLGPQSLAVAGFFYDGQGDWVRCFHCDGGLRKWTAMDEPWSEHARWFPECHFVM 464 (557)
Q Consensus 385 ~~~p~~p~~~~~~~Rl~Sf~~wp~~~~~~~~~LA~AGFfy~g~~D~v~Cf~Cg~~l~~w~~~Ddpw~eH~~~~p~C~fv~ 464 (557)
+..|.+|.|.++++||+||.+||.. ++++.||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|.|.|++
T Consensus 3 ~~~p~~~~m~~~~~Rl~TF~~Wp~~--~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~r~~p~C~f~~ 80 (95)
T 3hl5_A 3 HMLPRNPSMADYEARIFTFGTWIYS--VNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLL 80 (95)
T ss_dssp CSSCSCGGGCSHHHHHHTTTTCCSS--SCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHH
T ss_pred cCCCCCccccCHHHHHHHHcCCCCC--CCHHHHHhCCCeEcCCCCeEEecCCCCCccCcCCCCCHHHHHHHHCcCCcchH
Confidence 3468899999999999999999964 78999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhhh
Q psy2747 465 LVKGEQFIEDTIK 477 (557)
Q Consensus 465 ~~kG~~fv~~v~~ 477 (557)
+.||.+||++|+.
T Consensus 81 ~~kg~~fv~~i~~ 93 (95)
T 3hl5_A 81 EQKGQEYINNIHL 93 (95)
T ss_dssp HHTCHHHHHHHTT
T ss_pred hhccHHHHHHHHc
Confidence 9999999999865
No 4
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=99.94 E-value=7e-28 Score=213.39 Aligned_cols=94 Identities=45% Similarity=0.995 Sum_probs=89.4
Q ss_pred cCCCCCCCCCcChHhHhhhccCCCCCCCCChhHhhhcCccccCCCCeEEEEecCCceeeccCCCCcHHHHhhhcCCcchh
Q psy2747 384 NHRVPKHPNLSTLDSRVLTFTTWPRDSPLGPQSLAVAGFFYDGQGDWVRCFHCDGGLRKWTAMDEPWSEHARWFPECHFV 463 (557)
Q Consensus 384 ~~~~p~~p~~~~~~~Rl~Sf~~wp~~~~~~~~~LA~AGFfy~g~~D~v~Cf~Cg~~l~~w~~~Ddpw~eH~~~~p~C~fv 463 (557)
....|.+|.|.++++||+||.+||...+++++.||+|||||+|.+|.|+||+||++|.+|+.+||||.||++|+|.|.|+
T Consensus 14 ~~~~p~~p~~~~e~~Rl~TF~~WP~~~~~~p~~LA~AGFyYtg~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv 93 (124)
T 1jd5_A 14 GNYFPQYPEYAIETARLRTFEAWPRNLKQKPHQLAEAGFFYTGVGDRVRCFSCGGGLMDWNDNDEPWEQHALWLSQCRFV 93 (124)
T ss_dssp CCCCCSCGGGCSHHHHHHHGGGCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCHHH
T ss_pred CCCCCCChhhhCHHHHHHHHhhCCCCccCCHHHHHHcCCCCcCCCCEEEecCCCCEecCCCCCCCHHHHHHHHCcCCcee
Confidence 45668999999999999999999988778899999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhh
Q psy2747 464 MLVKGEQFIEDTIK 477 (557)
Q Consensus 464 ~~~kG~~fv~~v~~ 477 (557)
++.||.+||++++.
T Consensus 94 ~~~kg~~fv~~v~~ 107 (124)
T 1jd5_A 94 KLMKGQLYIDTVAA 107 (124)
T ss_dssp HHHHCHHHHHHHHH
T ss_pred ecccchHHHHHHHh
Confidence 99999999999865
No 5
>2vm5_A Baculoviral IAP repeat-containing protein 1; apoptosis; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.1e-27 Score=207.31 Aligned_cols=94 Identities=34% Similarity=0.767 Sum_probs=84.8
Q ss_pred CCCCCCCCCcChHhHhhhccCCCCCCC-CChhHhhhcCccccCCCCeEEEEecCCceeeccCCCCcHHHHhhhcCCcchh
Q psy2747 385 HRVPKHPNLSTLDSRVLTFTTWPRDSP-LGPQSLAVAGFFYDGQGDWVRCFHCDGGLRKWTAMDEPWSEHARWFPECHFV 463 (557)
Q Consensus 385 ~~~p~~p~~~~~~~Rl~Sf~~wp~~~~-~~~~~LA~AGFfy~g~~D~v~Cf~Cg~~l~~w~~~Ddpw~eH~~~~p~C~fv 463 (557)
...|.++.|.++++||+||.+||.... +++++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|.|.|+
T Consensus 10 ~~~~~~~~~~~~~~Rl~TF~~WP~~~~~~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~Fv 89 (106)
T 2vm5_A 10 RLRGGKMRYQEEEARLASFRNWPFYVQGISPCVLSEAGFVFTGKQDTVQCFSCGGCLGNWEEGDDPWKEHAKWFPKCEFL 89 (106)
T ss_dssp CCC---CTTSSHHHHHHGGGGCCGGGTTSCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCHHH
T ss_pred CCCCCchhhcCHHHHHHHHhcCCCCcccCCHHHHHHcCCCCcCCCCEEEccccCCEecCCCCCCCHHHHHHHHCcCCcch
Confidence 345889999999999999999997654 7899999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhhc
Q psy2747 464 MLVKGEQFIEDTIKA 478 (557)
Q Consensus 464 ~~~kG~~fv~~v~~~ 478 (557)
+..||.+||.+++..
T Consensus 90 ~~~Kg~~~i~~~~~~ 104 (106)
T 2vm5_A 90 RSKKSSEEITQYIQS 104 (106)
T ss_dssp HHHHCCTTSCCCCCC
T ss_pred hhccCHHHHHHHHHh
Confidence 999999999887553
No 6
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=99.94 E-value=3.5e-27 Score=199.91 Aligned_cols=74 Identities=42% Similarity=0.894 Sum_probs=71.2
Q ss_pred CcchHHHHhhccCCCCCCCCCHHHHHHcCceeecCCCceeeeeecceecCCccCCchHHhhhcCCCCCCCCcCC
Q psy2747 1 MNFERSRLRTFQSWPSNSPVSSKRIAKAGFFYTGHQHEVQCFACGVKISNWTYNDSVMAKHRAKDPGCPFVKNP 74 (557)
Q Consensus 1 M~~e~~Rl~TF~~wp~~~~~~~~~LA~aGFyytg~~d~V~Cf~Cg~~l~~w~~~d~~~~~H~~~~p~C~f~~~~ 74 (557)
|..|++||+||.+||...++++++||+|||||||.+|+|+||+||++|++|+++||||++|++++|+|+|++..
T Consensus 18 ~~~e~~Rl~TF~~WP~~~~~~p~~LA~AGFyytg~~D~V~Cf~C~~~l~~We~~DdP~~eH~r~~P~C~Fv~~~ 91 (94)
T 2poi_A 18 FVEEFNRLKTFANFPSGSPVSASTLARAGFLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGF 91 (94)
T ss_dssp TTSHHHHHGGGTTCCTTSSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTTTTTT
T ss_pred hhCHHHHHHHHhcCCCCccCCHHHHHHcCCCCcCCCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCcccccc
Confidence 88999999999999998789999999999999999999999999999999999999999999999999999753
No 7
>3mup_A Baculoviral IAP repeat-containing protein 2; zinc-finger motif, apoptosis inhibitor; HET: SMK; 2.60A {Homo sapiens} SCOP: g.52.1.1 PDB: 3oz1_A* 4eb9_A*
Probab=99.94 E-value=2.6e-27 Score=209.59 Aligned_cols=96 Identities=43% Similarity=0.977 Sum_probs=90.4
Q ss_pred CCCCCCCCcChHhHhhhccCCCCCCCCChhHhhhcCccccCCCCeEEEEecCCceeeccCCCCcHHHHhhhcCCcchhhh
Q psy2747 386 RVPKHPNLSTLDSRVLTFTTWPRDSPLGPQSLAVAGFFYDGQGDWVRCFHCDGGLRKWTAMDEPWSEHARWFPECHFVML 465 (557)
Q Consensus 386 ~~p~~p~~~~~~~Rl~Sf~~wp~~~~~~~~~LA~AGFfy~g~~D~v~Cf~Cg~~l~~w~~~Ddpw~eH~~~~p~C~fv~~ 465 (557)
..+.++.|.++++|++||.+||....+++++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|.|.|+++
T Consensus 10 ~~~~~~~m~s~~~Rl~TF~~WP~~~~~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv~~ 89 (122)
T 3mup_A 10 FSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIR 89 (122)
T ss_dssp -CCSCGGGCSHHHHHHGGGGCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHH
T ss_pred cCcCCccccCHHHHHHHHhcCCCcccCCHHHHHHCCCeEeCCCCeEEecCcCCEecCCCCCCCHHHHHHHHCcCCcchhh
Confidence 35778899999999999999998877899999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHhhhhcCCC
Q psy2747 466 VKGEQFIEDTIKANPP 481 (557)
Q Consensus 466 ~kG~~fv~~v~~~~~~ 481 (557)
.||.+||++|+...+.
T Consensus 90 ~kg~~fi~~i~~~~~~ 105 (122)
T 3mup_A 90 MKGQEFVDEIQGRYPH 105 (122)
T ss_dssp HHCHHHHHHHHHHCTT
T ss_pred cCcHHHHHHHHHhchh
Confidence 9999999999887765
No 8
>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} SCOP: g.52.1.1 PDB: 3d9u_A 3uw4_A* 2uvl_A
Probab=99.93 E-value=3.9e-27 Score=201.32 Aligned_cols=91 Identities=44% Similarity=1.027 Sum_probs=84.6
Q ss_pred CCCCCCcChHhHhhhccCCCCCCCCChhHhhhcCccccCCCCeEEEEecCCceeeccCCCCcHHHHhhhcCCcchhhhhh
Q psy2747 388 PKHPNLSTLDSRVLTFTTWPRDSPLGPQSLAVAGFFYDGQGDWVRCFHCDGGLRKWTAMDEPWSEHARWFPECHFVMLVK 467 (557)
Q Consensus 388 p~~p~~~~~~~Rl~Sf~~wp~~~~~~~~~LA~AGFfy~g~~D~v~Cf~Cg~~l~~w~~~Ddpw~eH~~~~p~C~fv~~~k 467 (557)
..+..|.++++||+||.+||...++++++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|.|.|+++.|
T Consensus 6 ~~~~~m~~~~~Rl~TF~~Wp~~~~~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~Ddp~~eH~r~~p~C~f~~~~k 85 (97)
T 3d9t_A 6 ISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMK 85 (97)
T ss_dssp --CGGGCSHHHHHHGGGGCCTTSSSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTBHHHHHHH
T ss_pred ccchhhhCHHHHHHHHhcCCCcccCCHHHHHHcCCCCcCCCCEEEecCcCCEecCCCCCCCHHHHHHHhCccChhhHhhc
Confidence 34667899999999999999877788999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHhhhhc
Q psy2747 468 GEQFIEDTIKA 478 (557)
Q Consensus 468 G~~fv~~v~~~ 478 (557)
|++||++++..
T Consensus 86 g~~~v~~~~~~ 96 (97)
T 3d9t_A 86 GQEFVDEIQGR 96 (97)
T ss_dssp CHHHHHHHTTC
T ss_pred cHHHHHHHHhc
Confidence 99999998653
No 9
>1g73_C Inhibitors of apoptosis-like protein ILP; helix bundle, zinc-binding domain, apoptosis/apoptosis inhibitor complex; 2.00A {Homo sapiens} SCOP: g.52.1.1 PDB: 3cm2_D* 3clx_D* 3cm7_C* 1f9x_A 1g3f_A 1tfq_A* 1tft_A* 3eyl_A* 3g76_A* 2jk7_A* 2opz_A 2opy_A* 1xb0_A 1xb1_A
Probab=99.93 E-value=7.4e-27 Score=206.60 Aligned_cols=94 Identities=36% Similarity=0.988 Sum_probs=85.9
Q ss_pred CCCCCCCCCcChHhHhhhccCCCCCCCCChhHhhhcCccccCCCCeEEEEecCCceeeccCCCCcHHHHhhhcCCcchhh
Q psy2747 385 HRVPKHPNLSTLDSRVLTFTTWPRDSPLGPQSLAVAGFFYDGQGDWVRCFHCDGGLRKWTAMDEPWSEHARWFPECHFVM 464 (557)
Q Consensus 385 ~~~p~~p~~~~~~~Rl~Sf~~wp~~~~~~~~~LA~AGFfy~g~~D~v~Cf~Cg~~l~~w~~~Ddpw~eH~~~~p~C~fv~ 464 (557)
...|.+|.|.++++||+||.+||.. +++++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|.|.|++
T Consensus 17 ~~~p~~~~m~~~~~Rl~TF~~Wp~~--~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~P~C~Fv~ 94 (121)
T 1g73_C 17 TNLPRNPSMADYEARIFTFGTWIYS--VNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLL 94 (121)
T ss_dssp --CCSCGGGCSHHHHHHTTTTCCSS--SCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCHHHH
T ss_pred CCCCCChhhhCHHHHHHHHccCCCC--CCHHHHHHcCCCCcCCCCEEEcCcCCCCcCCCCCCCCHHHHHHHHCcCCcchh
Confidence 3568999999999999999999975 78999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhhhcCC
Q psy2747 465 LVKGEQFIEDTIKANP 480 (557)
Q Consensus 465 ~~kG~~fv~~v~~~~~ 480 (557)
..||.+||++++...|
T Consensus 95 ~~kg~~~v~~v~~~~p 110 (121)
T 1g73_C 95 EQKGQEYINNIHLTHS 110 (121)
T ss_dssp HHHHHHHHHHHTC---
T ss_pred hccchhhhccccccCC
Confidence 9999999999976554
No 10
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.2e-26 Score=201.44 Aligned_cols=74 Identities=42% Similarity=0.894 Sum_probs=71.2
Q ss_pred CcchHHHHhhccCCCCCCCCCHHHHHHcCceeecCCCceeeeeecceecCCccCCchHHhhhcCCCCCCCCcCC
Q psy2747 1 MNFERSRLRTFQSWPSNSPVSSKRIAKAGFFYTGHQHEVQCFACGVKISNWTYNDSVMAKHRAKDPGCPFVKNP 74 (557)
Q Consensus 1 M~~e~~Rl~TF~~wp~~~~~~~~~LA~aGFyytg~~d~V~Cf~Cg~~l~~w~~~d~~~~~H~~~~p~C~f~~~~ 74 (557)
|..|++||+||.+||...++++++||+|||||||.+|+|+||+||++|++|+++||||+||++++|+|+|++..
T Consensus 35 m~~e~~RL~TF~~WP~~~~~~p~~LA~AGFyYtg~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~sP~C~Fv~~~ 108 (111)
T 2qra_D 35 FVEEFNRLKTFANFPSGSPVSASTLARAGFLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGF 108 (111)
T ss_dssp TTSHHHHHHTTTTCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTTTTTT
T ss_pred hhCHHHHHHHHhcCCCCccCCHHHHHHcCCCCcCCCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCcchhhc
Confidence 78999999999999998789999999999999999999999999999999999999999999999999999753
No 11
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=99.93 E-value=4.8e-27 Score=195.71 Aligned_cols=73 Identities=40% Similarity=0.937 Sum_probs=70.4
Q ss_pred CcchHHHHhhccCCCCCCCCCHHHHHHcCceeecCCCceeeeeecceecCCccCCchHHhhhcCCCCCCCCcC
Q psy2747 1 MNFERSRLRTFQSWPSNSPVSSKRIAKAGFFYTGHQHEVQCFACGVKISNWTYNDSVMAKHRAKDPGCPFVKN 73 (557)
Q Consensus 1 M~~e~~Rl~TF~~wp~~~~~~~~~LA~aGFyytg~~d~V~Cf~Cg~~l~~w~~~d~~~~~H~~~~p~C~f~~~ 73 (557)
|..|++||+||.+||...+++++.||+|||||||.+|+|+||+|+++|++|+++|||+++|++++|+|+|+++
T Consensus 9 ~~~e~~Rl~TF~~WP~~~~~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~F~~~ 81 (85)
T 3m1d_A 9 FSCELYRMSTYSTFPAGVPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQN 81 (85)
T ss_dssp HHHHHHHHHGGGGCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECSCCTTCCHHHHHHHHCTTCHHHHH
T ss_pred hHhHHHHHHHHhcCCCCCcCCHHHHHHCCCeEeCCCCEEEeCCcCCEecCCCCCCCHHHHHHHHCccCcchhc
Confidence 6789999999999999888999999999999999999999999999999999999999999999999999864
No 12
>3siq_A Apoptosis 1 inhibitor; DIAP1-BIR1 domain, ligase; 2.40A {Drosophila melanogaster}
Probab=99.93 E-value=2e-26 Score=205.86 Aligned_cols=82 Identities=33% Similarity=0.815 Sum_probs=76.7
Q ss_pred CcchHHHHhhccCCCCCCCCCHHHHHHcCceeecCCCceeeeeecceecCCccCCchHHhhhcCCCCCCCCcCCCCCCCc
Q psy2747 1 MNFERSRLRTFQSWPSNSPVSSKRIAKAGFFYTGHQHEVQCFACGVKISNWTYNDSVMAKHRAKDPGCPFVKNPEASGNV 80 (557)
Q Consensus 1 M~~e~~Rl~TF~~wp~~~~~~~~~LA~aGFyytg~~d~V~Cf~Cg~~l~~w~~~d~~~~~H~~~~p~C~f~~~~~~~~n~ 80 (557)
|..|++||+||.+||.. .+++++||+|||||||.+|+|+||+||++|.+|+++||||+||++++|+|+|++.. .++||
T Consensus 34 y~~e~~RL~TF~~WP~~-~~~p~~LA~AGFYYtG~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~-~~~Nv 111 (136)
T 3siq_A 34 LNREETRLKTFTDWPLD-WLDKRQLAQTGMYFTHAGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPLLRRR-TTNNV 111 (136)
T ss_dssp TTBHHHHHHTTTTCCCT-TSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCTTTTTC-CCCCB
T ss_pred hhCHHHHHHHHccCCCC-cCCHHHHHHCCCeEcCCCCeEEEeccCCEecCCCCCCCHHHHHHHHCcCCcceecc-cCCCc
Confidence 78899999999999986 48999999999999999999999999999999999999999999999999999876 46899
Q ss_pred cccc
Q psy2747 81 SIEN 84 (557)
Q Consensus 81 ~~~~ 84 (557)
++..
T Consensus 112 pi~~ 115 (136)
T 3siq_A 112 PINA 115 (136)
T ss_dssp CSCH
T ss_pred cCCc
Confidence 8854
No 13
>2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 4a0i_A 4a0j_A* 4a0n_A* 2raw_A 3uec_A* 3ued_A* 3uef_A 3uig_A* 3uih_A 3uii_A 1f3h_A 3uee_A 3ueg_A* 3uei_A 3ueh_A* 3uik_A 3uij_A 1m4m_A 2rax_A ...
Probab=99.93 E-value=1.9e-27 Score=217.01 Aligned_cols=75 Identities=27% Similarity=0.634 Sum_probs=70.2
Q ss_pred CcchHHHHhhccCCCCCC--CCCHHHHHHcCceeecCC---CceeeeeecceecCCccCCchHHhhhcCCCCCCCCcCCC
Q psy2747 1 MNFERSRLRTFQSWPSNS--PVSSKRIAKAGFFYTGHQ---HEVQCFACGVKISNWTYNDSVMAKHRAKDPGCPFVKNPE 75 (557)
Q Consensus 1 M~~e~~Rl~TF~~wp~~~--~~~~~~LA~aGFyytg~~---d~V~Cf~Cg~~l~~w~~~d~~~~~H~~~~p~C~f~~~~~ 75 (557)
|..|++||+||.+||... .++++.||+|||||||.+ |.|+||+||++|.+|+++||||+||++|+|+|+|++...
T Consensus 12 ~~~~~~Rl~TF~~WP~~~~~~~~p~~LA~AGFyy~g~~~~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~p~C~F~~~~k 91 (142)
T 2qfa_A 12 PFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKK 91 (142)
T ss_dssp GGSHHHHHHTCCSCSCCSSCSSCHHHHHHTTEEECCBTTBTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCGGGGCCS
T ss_pred ccCHHHHHHHHhcCCccCCcCCCHHHHHHcCCCcCCCCCCCCEEEcCCCCCEecccCCCCCHHHHHHHHCcCCcceeccc
Confidence 788999999999999863 589999999999999986 999999999999999999999999999999999998643
No 14
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=99.93 E-value=2.9e-26 Score=195.05 Aligned_cols=86 Identities=33% Similarity=0.593 Sum_probs=80.8
Q ss_pred ccccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCccccccchh
Q psy2747 221 EEVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLARDNQA 300 (557)
Q Consensus 221 ~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~~~~~~ 300 (557)
.+.|.++++||+||.+||+. +++++||+|||||+|.+|+|+||+|+++|.+|+++||||.||++|+|+|+|++..||+
T Consensus 8 ~~~m~~~~~Rl~TF~~Wp~~--~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~r~~p~C~f~~~~kg~ 85 (95)
T 3hl5_A 8 NPSMADYEARIFTFGTWIYS--VNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQ 85 (95)
T ss_dssp CGGGCSHHHHHHTTTTCCSS--SCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHHTCH
T ss_pred CccccCHHHHHHHHcCCCCC--CCHHHHHhCCCeEcCCCCeEEecCCCCCccCcCCCCCHHHHHHHHCcCCcchHhhccH
Confidence 56899999999999999986 5999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhh
Q psy2747 301 TQANMINL 308 (557)
Q Consensus 301 ~~~~~~~~ 308 (557)
.+++.|.+
T Consensus 86 ~fv~~i~~ 93 (95)
T 3hl5_A 86 EYINNIHL 93 (95)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHc
Confidence 88877654
No 15
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A 3sip_E
Probab=99.93 E-value=3.6e-26 Score=200.71 Aligned_cols=83 Identities=34% Similarity=0.820 Sum_probs=77.0
Q ss_pred CcchHHHHhhccCCCCCCCCCHHHHHHcCceeecCCCceeeeeecceecCCccCCchHHhhhcCCCCCCCCcCCCCCCCc
Q psy2747 1 MNFERSRLRTFQSWPSNSPVSSKRIAKAGFFYTGHQHEVQCFACGVKISNWTYNDSVMAKHRAKDPGCPFVKNPEASGNV 80 (557)
Q Consensus 1 M~~e~~Rl~TF~~wp~~~~~~~~~LA~aGFyytg~~d~V~Cf~Cg~~l~~w~~~d~~~~~H~~~~p~C~f~~~~~~~~n~ 80 (557)
|..|++||+||.+||.. .+++++||+|||||||.+|+|+||+||++|.+|+++||||+||++|+|+|+|++.. ..+|+
T Consensus 12 ~~~e~~Rl~TF~~WP~~-~~~~~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~Fv~~~-~~~nv 89 (116)
T 1se0_A 12 LNREETRLKTFTDWPLD-WLDKRQLAQTGMYFTHAGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPLLRRR-TTNNV 89 (116)
T ss_dssp TTBHHHHHTTCTTCCCT-TSCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCTTTTTC-CCCCB
T ss_pred hcCHHHHHHHHhhCCCC-cCCHHHHHHcCCcCcCCCCEEEecCcCCEecCCCCCCCHHHHHHHHCccCcceeee-ccCcc
Confidence 78899999999999984 68999999999999999999999999999999999999999999999999999875 57888
Q ss_pred cccch
Q psy2747 81 SIENE 85 (557)
Q Consensus 81 ~~~~~ 85 (557)
++...
T Consensus 90 p~~~~ 94 (116)
T 1se0_A 90 PINAE 94 (116)
T ss_dssp CSCHH
T ss_pred ccCCC
Confidence 87543
No 16
>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3uw5_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A*
Probab=99.92 E-value=4.8e-26 Score=203.35 Aligned_cols=89 Identities=36% Similarity=0.641 Sum_probs=81.9
Q ss_pred CccccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCccccccch
Q psy2747 220 NEEVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLARDNQ 299 (557)
Q Consensus 220 ~~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~~~~~ 299 (557)
..+.|.++++||+||.+||....++|++||+|||||+|.+|+|+||+|+++|.+|+++||||.||+||+|+|+|++..||
T Consensus 41 ~~~~m~~e~~RL~SF~~WP~~~~~~pe~LA~AGFYYtg~~D~V~Cf~C~~~L~~We~~DDP~~EH~r~~P~C~Fv~~~Kg 120 (133)
T 2i3h_A 41 AFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPGCQFLLRSKG 120 (133)
T ss_dssp SCGGGCCHHHHHHTTTTCSCTTTSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCHHHHHHHC
T ss_pred CchhhhCHHHHHHHHhcCCCCcCCCHHHHHHcCCCCcCCCCEEEecccCCEeCCCCCCCCHHHHHHHHCcCCceehhccc
Confidence 35689999999999999998766799999999999999999999999999999999999999999999999999998889
Q ss_pred hhhhhhhhh
Q psy2747 300 ATQANMINL 308 (557)
Q Consensus 300 ~~~~~~~~~ 308 (557)
+.+++.+..
T Consensus 121 ~~fv~~v~~ 129 (133)
T 2i3h_A 121 QEYINNIHL 129 (133)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhh
Confidence 888776643
No 17
>2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 4a0i_A 4a0j_A* 4a0n_A* 2raw_A 3uec_A* 3ued_A* 3uef_A 3uig_A* 3uih_A 3uii_A 1f3h_A 3uee_A 3ueg_A* 3uei_A 3ueh_A* 3uik_A 3uij_A 1m4m_A 2rax_A ...
Probab=99.92 E-value=8e-27 Score=212.92 Aligned_cols=120 Identities=21% Similarity=0.418 Sum_probs=95.8
Q ss_pred ccccccchhHHHHHhhccCCCCCC--ccCHHHHHHcCceecCCC---CceeccccccccccccCCCChHHHhhcCCCCCC
Q psy2747 131 SFRSITMNFERSRLRTFQSWPSNS--PVSSKRIAKAGFFYTGHQ---HEVQCFACGVKISNWTYNDSVMAKHRAKDPGCP 205 (557)
Q Consensus 131 ~~~~~~~~~e~~Rl~TF~~wp~~~--~~~~~~LA~aGFyy~g~~---D~v~C~~C~~~l~~w~~~D~p~~eH~~~~p~C~ 205 (557)
.+.+..|.++++||+||.+||+.. .+++++||+|||||+|.. |.|+||+|++.|++|+++||||.||++++|.|+
T Consensus 6 ~p~~~~~~~~~~Rl~TF~~WP~~~~~~~~p~~LA~AGFyy~g~~~~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~p~C~ 85 (142)
T 2qfa_A 6 LPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCA 85 (142)
T ss_dssp CCTTTGGGSHHHHHHTCCSCSCCSSCSSCHHHHHHTTEEECCBTTBTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCG
T ss_pred CCCcccccCHHHHHHHHhcCCccCCcCCCHHHHHHcCCCcCCCCCCCCEEEcCCCCCEecccCCCCCHHHHHHHHCcCCc
Confidence 355678999999999999999875 478999999999999976 999999999999999999999999999999999
Q ss_pred CccCCCCCCCcccCC----------ccccccHHHHHccCCCCCCCCCCCHHHHHh
Q psy2747 206 FVKNPEASGNVSIEN----------EEVYKLESGRLATFNNWPVSFIVTPEALAK 250 (557)
Q Consensus 206 f~~~~~~~~~~~~~~----------~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~ 250 (557)
|+.......++.+.+ .......++|++||.+||......+.+||.
T Consensus 86 F~~~~k~~~~~t~~~~l~l~~~~~~~~~~~~~~~r~~~F~~~p~~~~~~~~~la~ 140 (142)
T 2qfa_A 86 FLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAA 140 (142)
T ss_dssp GGGCCSCGGGCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceecccccchhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 997543222222110 011233489999999999764446777875
No 18
>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} SCOP: g.52.1.1 PDB: 3d9u_A 3uw4_A* 2uvl_A
Probab=99.92 E-value=5.2e-26 Score=194.34 Aligned_cols=87 Identities=37% Similarity=0.673 Sum_probs=80.7
Q ss_pred ccccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCccccccchh
Q psy2747 221 EEVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLARDNQA 300 (557)
Q Consensus 221 ~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~~~~~~ 300 (557)
...|.++++||+||.+||....++|++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|+|+|++..||+
T Consensus 8 ~~~m~~~~~Rl~TF~~Wp~~~~~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~Ddp~~eH~r~~p~C~f~~~~kg~ 87 (97)
T 3d9t_A 8 NLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQ 87 (97)
T ss_dssp CGGGCSHHHHHHGGGGCCTTSSSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTBHHHHHHHCH
T ss_pred chhhhCHHHHHHHHhcCCCcccCCHHHHHHcCCCCcCCCCEEEecCcCCEecCCCCCCCHHHHHHHhCccChhhHhhccH
Confidence 45799999999999999987667999999999999999999999999999999999999999999999999999988888
Q ss_pred hhhhhhh
Q psy2747 301 TQANMIN 307 (557)
Q Consensus 301 ~~~~~~~ 307 (557)
.+++.+.
T Consensus 88 ~~v~~~~ 94 (97)
T 3d9t_A 88 EFVDEIQ 94 (97)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8777654
No 19
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=99.92 E-value=8.5e-26 Score=200.06 Aligned_cols=88 Identities=27% Similarity=0.574 Sum_probs=81.0
Q ss_pred CccccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCccccccch
Q psy2747 220 NEEVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLARDNQ 299 (557)
Q Consensus 220 ~~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~~~~~ 299 (557)
..+.|.++++||+||.+||....+++++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|+|+|++..||
T Consensus 19 ~~p~~~~e~~Rl~TF~~WP~~~~~~p~~LA~AGFyYtg~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv~~~kg 98 (124)
T 1jd5_A 19 QYPEYAIETARLRTFEAWPRNLKQKPHQLAEAGFFYTGVGDRVRCFSCGGGLMDWNDNDEPWEQHALWLSQCRFVKLMKG 98 (124)
T ss_dssp SCGGGCSHHHHHHHGGGCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCHHHHHHHC
T ss_pred CChhhhCHHHHHHHHhhCCCCccCCHHHHHHcCCCCcCCCCEEEecCCCCEecCCCCCCCHHHHHHHHCcCCceeecccc
Confidence 35689999999999999998876799999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhhhhh
Q psy2747 300 ATQANMIN 307 (557)
Q Consensus 300 ~~~~~~~~ 307 (557)
..+++.+.
T Consensus 99 ~~fv~~v~ 106 (124)
T 1jd5_A 99 QLYIDTVA 106 (124)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 77666554
No 20
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=99.92 E-value=1.4e-25 Score=190.16 Aligned_cols=75 Identities=41% Similarity=0.887 Sum_probs=71.5
Q ss_pred ccchhHHHHHhhccCCCCCCccCHHHHHHcCceecCCCCceeccccccccccccCCCChHHHhhcCCCCCCCccC
Q psy2747 135 ITMNFERSRLRTFQSWPSNSPVSSKRIAKAGFFYTGHQHEVQCFACGVKISNWTYNDSVMAKHRAKDPGCPFVKN 209 (557)
Q Consensus 135 ~~~~~e~~Rl~TF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~w~~~D~p~~eH~~~~p~C~f~~~ 209 (557)
..|.+|++||+||.+||...++++++||+|||||+|.+|+|+||+|++.|++|+++|||++||++++|+|+|++.
T Consensus 16 ~~~~~e~~Rl~TF~~WP~~~~~~p~~LA~AGFyytg~~D~V~Cf~C~~~l~~We~~DdP~~eH~r~~P~C~Fv~~ 90 (94)
T 2poi_A 16 EEFVEEFNRLKTFANFPSGSPVSASTLARAGFLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFING 90 (94)
T ss_dssp -CTTSHHHHHGGGTTCCTTSSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTTTTT
T ss_pred hhhhCHHHHHHHHhcCCCCccCCHHHHHHcCCCCcCCCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCccccc
Confidence 579999999999999999877899999999999999999999999999999999999999999999999999975
No 21
>1i4o_C X-linked IAP, baculoviral IAP repeat-containing protein 4; protease-inhibitor, apoptosis-hydrolase complex; 2.40A {Homo sapiens} PDB: 1kmc_C 1i51_E 1i3o_E 1c9q_A
Probab=99.92 E-value=9e-26 Score=204.18 Aligned_cols=81 Identities=40% Similarity=0.804 Sum_probs=76.1
Q ss_pred CcchHHHHhhccCCCCCCCCCHHHHHHcCceeecCCCceeeeeecceecCCccCCchHHhhhcCCCCCCCCcCCCCCCCc
Q psy2747 1 MNFERSRLRTFQSWPSNSPVSSKRIAKAGFFYTGHQHEVQCFACGVKISNWTYNDSVMAKHRAKDPGCPFVKNPEASGNV 80 (557)
Q Consensus 1 M~~e~~Rl~TF~~wp~~~~~~~~~LA~aGFyytg~~d~V~Cf~Cg~~l~~w~~~d~~~~~H~~~~p~C~f~~~~~~~~n~ 80 (557)
|..|++||+||.+||....+++++||+|||||||.+|+|+||+||++|.+|+++||||+||++|+|+|+|++... + |+
T Consensus 41 m~~e~~Rl~TF~~WP~~~~~~p~~LA~AGFyY~g~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv~~~~-~-nv 118 (141)
T 1i4o_C 41 MYSEEARLKSFQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRN-L-NI 118 (141)
T ss_pred hhCHHHHHHHHhcCCCCccCCHHHHHHcCCcCcCCCCEEEeccCCCEecCCCCCCCHHHHHHHHCcCCcccCccc-c-CC
Confidence 788999999999999877789999999999999999999999999999999999999999999999999998764 4 88
Q ss_pred ccc
Q psy2747 81 SIE 83 (557)
Q Consensus 81 ~~~ 83 (557)
++.
T Consensus 119 p~~ 121 (141)
T 1i4o_C 119 RSE 121 (141)
T ss_pred Ccc
Confidence 774
No 22
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=99.91 E-value=9.2e-26 Score=187.98 Aligned_cols=77 Identities=32% Similarity=0.735 Sum_probs=71.5
Q ss_pred CCccccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCcccc
Q psy2747 219 ENEEVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLA 295 (557)
Q Consensus 219 ~~~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~ 295 (557)
.+..+|.+++.||+||.+||+...+++++||+|||||+|.+|+|+||+|+++|.+|+++||||+||++|+|+|+|++
T Consensus 4 ~~~~~~~~e~~Rl~TF~~WP~~~~~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~F~~ 80 (85)
T 3m1d_A 4 GSKYDFSCELYRMSTYSTFPAGVPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQ 80 (85)
T ss_dssp ---CCHHHHHHHHHGGGGCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECSCCTTCCHHHHHHHHCTTCHHHH
T ss_pred ccHHHhHhHHHHHHHHhcCCCCCcCCHHHHHHCCCeEeCCCCEEEeCCcCCEecCCCCCCCHHHHHHHHCccCcchh
Confidence 34558999999999999999987679999999999999999999999999999999999999999999999999997
No 23
>3mup_A Baculoviral IAP repeat-containing protein 2; zinc-finger motif, apoptosis inhibitor; HET: SMK; 2.60A {Homo sapiens} SCOP: g.52.1.1 PDB: 3oz1_A* 4eb9_A*
Probab=99.91 E-value=1.6e-25 Score=198.21 Aligned_cols=88 Identities=36% Similarity=0.649 Sum_probs=82.3
Q ss_pred ccccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCccccccchh
Q psy2747 221 EEVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLARDNQA 300 (557)
Q Consensus 221 ~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~~~~~~ 300 (557)
...|.++++||+||.+||....++|++||+|||||+|.+|+|+||+|+++|.+|+++||||.||++|+|+|+|++..||+
T Consensus 14 ~~~m~s~~~Rl~TF~~WP~~~~~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv~~~kg~ 93 (122)
T 3mup_A 14 NLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQ 93 (122)
T ss_dssp CGGGCSHHHHHHGGGGCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHHHCH
T ss_pred CccccCHHHHHHHHhcCCCcccCCHHHHHHCCCeEeCCCCeEEecCcCCEecCCCCCCCHHHHHHHHCcCCcchhhcCcH
Confidence 45899999999999999988667999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhh
Q psy2747 301 TQANMINL 308 (557)
Q Consensus 301 ~~~~~~~~ 308 (557)
.+++.|..
T Consensus 94 ~fi~~i~~ 101 (122)
T 3mup_A 94 EFVDEIQG 101 (122)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777654
No 24
>2vm5_A Baculoviral IAP repeat-containing protein 1; apoptosis; 1.80A {Homo sapiens}
Probab=99.91 E-value=4.8e-26 Score=197.16 Aligned_cols=83 Identities=34% Similarity=0.746 Sum_probs=74.9
Q ss_pred CccccccHHHHHccCCCCCCCCC-CCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCccccccc
Q psy2747 220 NEEVYKLESGRLATFNNWPVSFI-VTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLARDN 298 (557)
Q Consensus 220 ~~~~~~~~~~Rl~SF~~wp~~~~-~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~~~~ 298 (557)
+.+.|.++++||+||.+||+... ++|++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|+|+|++..|
T Consensus 14 ~~~~~~~~~~Rl~TF~~WP~~~~~~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~Fv~~~K 93 (106)
T 2vm5_A 14 GKMRYQEEEARLASFRNWPFYVQGISPCVLSEAGFVFTGKQDTVQCFSCGGCLGNWEEGDDPWKEHAKWFPKCEFLRSKK 93 (106)
T ss_dssp --CTTSSHHHHHHGGGGCCGGGTTSCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCHHHHHHH
T ss_pred CchhhcCHHHHHHHHhcCCCCcccCCHHHHHHcCCCCcCCCCEEEccccCCEecCCCCCCCHHHHHHHHCcCCcchhhcc
Confidence 45689999999999999998754 68999999999999999999999999999999999999999999999999999666
Q ss_pred hhhh
Q psy2747 299 QATQ 302 (557)
Q Consensus 299 ~~~~ 302 (557)
|..+
T Consensus 94 g~~~ 97 (106)
T 2vm5_A 94 SSEE 97 (106)
T ss_dssp CCTT
T ss_pred CHHH
Confidence 6443
No 25
>1i4o_C X-linked IAP, baculoviral IAP repeat-containing protein 4; protease-inhibitor, apoptosis-hydrolase complex; 2.40A {Homo sapiens} PDB: 1kmc_C 1i51_E 1i3o_E 1c9q_A
Probab=99.91 E-value=3.1e-25 Score=200.67 Aligned_cols=104 Identities=33% Similarity=0.513 Sum_probs=89.1
Q ss_pred CCCChHHHhhcCCCCCCCccCCCCCCCcccCCccccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeecc
Q psy2747 189 YNDSVMAKHRAKDPGCPFVKNPEASGNVSIENEEVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCS 268 (557)
Q Consensus 189 ~~D~p~~eH~~~~p~C~f~~~~~~~~~~~~~~~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~ 268 (557)
.+|+|.++|......|.-+... ........+.|.++++||+||.+||+...+++++||+|||||+|.+|+|+||+|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~m~~e~~Rl~TF~~WP~~~~~~p~~LA~AGFyY~g~~D~V~Cf~C~ 85 (141)
T 1i4o_C 9 ALDRPSETHADYLLRTGQVVDI---SDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCG 85 (141)
T ss_pred ccCCchhhcccccccccccccc---ccccCCCChhhhCHHHHHHHHhcCCCCccCCHHHHHHcCCcCcCCCCEEEeccCC
Confidence 4688999998877777544321 1112233458999999999999999887679999999999999999999999999
Q ss_pred CcccccCCCCChHHHhhhcCCCCcccc
Q psy2747 269 VIIGRWEQGDNAESEHKRQSPNCPFLA 295 (557)
Q Consensus 269 ~~l~~W~~~Ddp~~eH~~~~p~C~f~~ 295 (557)
++|.+|+++||||.||++|+|+|+|++
T Consensus 86 ~~L~~We~~DdP~~EH~r~~P~C~Fv~ 112 (141)
T 1i4o_C 86 GKLKNWEPCDRAWSEHRRHFPNCFFVL 112 (141)
T ss_pred CEecCCCCCCCHHHHHHHHCcCCcccC
Confidence 999999999999999999999999998
No 26
>1g73_C Inhibitors of apoptosis-like protein ILP; helix bundle, zinc-binding domain, apoptosis/apoptosis inhibitor complex; 2.00A {Homo sapiens} SCOP: g.52.1.1 PDB: 3cm2_D* 3clx_D* 3cm7_C* 1f9x_A 1g3f_A 1tfq_A* 1tft_A* 3eyl_A* 3g76_A* 2jk7_A* 2opz_A 2opy_A* 1xb0_A 1xb1_A
Probab=99.91 E-value=2.4e-25 Score=196.92 Aligned_cols=86 Identities=33% Similarity=0.593 Sum_probs=80.2
Q ss_pred ccccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCccccccchh
Q psy2747 221 EEVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLARDNQA 300 (557)
Q Consensus 221 ~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~~~~~~ 300 (557)
.+.|.++++||+||.+||+. +++++||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|+|+|++..||.
T Consensus 22 ~~~m~~~~~Rl~TF~~Wp~~--~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~P~C~Fv~~~kg~ 99 (121)
T 1g73_C 22 NPSMADYEARIFTFGTWIYS--VNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQ 99 (121)
T ss_dssp CGGGCSHHHHHHTTTTCCSS--SCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCHHHHHHHHH
T ss_pred ChhhhCHHHHHHHHccCCCC--CCHHHHHHcCCCCcCCCCEEEcCcCCCCcCCCCCCCCHHHHHHHHCcCCcchhhccch
Confidence 56899999999999999987 5899999999999999999999999999999999999999999999999999988888
Q ss_pred hhhhhhhh
Q psy2747 301 TQANMINL 308 (557)
Q Consensus 301 ~~~~~~~~ 308 (557)
.+.+.+.+
T Consensus 100 ~~v~~v~~ 107 (121)
T 1g73_C 100 EYINNIHL 107 (121)
T ss_dssp HHHHHHTC
T ss_pred hhhccccc
Confidence 87776654
No 27
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=99.91 E-value=4.5e-25 Score=191.56 Aligned_cols=75 Identities=41% Similarity=0.887 Sum_probs=71.5
Q ss_pred ccchhHHHHHhhccCCCCCCccCHHHHHHcCceecCCCCceeccccccccccccCCCChHHHhhcCCCCCCCccC
Q psy2747 135 ITMNFERSRLRTFQSWPSNSPVSSKRIAKAGFFYTGHQHEVQCFACGVKISNWTYNDSVMAKHRAKDPGCPFVKN 209 (557)
Q Consensus 135 ~~~~~e~~Rl~TF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~w~~~D~p~~eH~~~~p~C~f~~~ 209 (557)
..|.+|++||+||.+||...++++++||+|||||+|.+|+|+||+|++.|++|+++|||++||++++|+|+|++.
T Consensus 33 ~~m~~e~~RL~TF~~WP~~~~~~p~~LA~AGFyYtg~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~sP~C~Fv~~ 107 (111)
T 2qra_D 33 EEFVEEFNRLKTFANFPSGSPVSASTLARAGFLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFING 107 (111)
T ss_dssp -CTTSHHHHHHTTTTCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTTTTT
T ss_pred hhhhCHHHHHHHHhcCCCCccCCHHHHHHcCCCCcCCCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCcchhh
Confidence 579999999999999999877899999999999999999999999999999999999999999999999999975
No 28
>3siq_A Apoptosis 1 inhibitor; DIAP1-BIR1 domain, ligase; 2.40A {Drosophila melanogaster}
Probab=99.91 E-value=7.5e-25 Score=195.66 Aligned_cols=74 Identities=47% Similarity=0.950 Sum_probs=70.7
Q ss_pred ccccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCcccc
Q psy2747 221 EEVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLA 295 (557)
Q Consensus 221 ~~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~ 295 (557)
.++|.++++||+||.+||+.. +++++||+|||||+|.+|+|+||+|+++|.+|+++||||+||+||+|.|+|++
T Consensus 31 ~~dy~~e~~RL~TF~~WP~~~-~~p~~LA~AGFYYtG~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~ 104 (136)
T 3siq_A 31 MNDLNREETRLKTFTDWPLDW-LDKRQLAQTGMYFTHAGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPLLR 104 (136)
T ss_dssp CCCTTBHHHHHHTTTTCCCTT-SCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCTTTT
T ss_pred HHhhhCHHHHHHHHccCCCCc-CCHHHHHHCCCeEcCCCCeEEEeccCCEecCCCCCCCHHHHHHHHCcCCccee
Confidence 347999999999999999976 59999999999999999999999999999999999999999999999999998
No 29
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A 3sip_E
Probab=99.90 E-value=1.4e-24 Score=190.72 Aligned_cols=73 Identities=48% Similarity=0.972 Sum_probs=70.0
Q ss_pred cccccHHHHHccCCCCCCCCCCCHHHHHhcCceeccCCCeEEeeeccCcccccCCCCChHHHhhhcCCCCcccc
Q psy2747 222 EVYKLESGRLATFNNWPVSFIVTPEALAKTGFYYLKQGDKVKCAYCSVIIGRWEQGDNAESEHKRQSPNCPFLA 295 (557)
Q Consensus 222 ~~~~~~~~Rl~SF~~wp~~~~~~~~~LA~aGFyy~g~~D~v~C~~C~~~l~~W~~~Ddp~~eH~~~~p~C~f~~ 295 (557)
++|.++++||+||.+||+.. +++++||+|||||+|.+|+|+||+|+++|.+|+++||||.||++|+|+|+|++
T Consensus 10 ~~~~~e~~Rl~TF~~WP~~~-~~~~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~Fv~ 82 (116)
T 1se0_A 10 NDLNREETRLKTFTDWPLDW-LDKRQLAQTGMYFTHAGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPLLR 82 (116)
T ss_dssp CCTTBHHHHHTTCTTCCCTT-SCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCTTTT
T ss_pred hhhcCHHHHHHHHhhCCCCc-CCHHHHHHcCCcCcCCCCEEEecCcCCEecCCCCCCCHHHHHHHHCccCccee
Confidence 47999999999999999865 59999999999999999999999999999999999999999999999999998
No 30
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=99.86 E-value=9e-23 Score=212.25 Aligned_cols=89 Identities=46% Similarity=1.091 Sum_probs=84.3
Q ss_pred CCcChHhHhhhccCCCCCCCCChhHhhhcCccccCCCCeEEEEecCCceeeccCCCCcHHHHhhhcCCcchhhhhhhhhH
Q psy2747 392 NLSTLDSRVLTFTTWPRDSPLGPQSLAVAGFFYDGQGDWVRCFHCDGGLRKWTAMDEPWSEHARWFPECHFVMLVKGEQF 471 (557)
Q Consensus 392 ~~~~~~~Rl~Sf~~wp~~~~~~~~~LA~AGFfy~g~~D~v~Cf~Cg~~l~~w~~~Ddpw~eH~~~~p~C~fv~~~kG~~f 471 (557)
.|.++++|++||.+||...+++++.||+|||||+|.+|.|+||+|+++|.+|+++||||.||++|+|.|.|++..||.+|
T Consensus 2 ~m~~~~~Rl~tF~~WP~~~~~~~~~lA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~f~~~~kg~~~ 81 (345)
T 3t6p_A 2 SMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFSCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEF 81 (345)
T ss_dssp TTSSHHHHHHHGGGSCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHHHCHHH
T ss_pred CCccHHHHHHHHhhCCCcccCCHHHHHhCCCeecCCCCeEEecCCCCCccCCCCCCCHHHHHHHhCCCCccHHHhccHHH
Confidence 47789999999999998878899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCC
Q psy2747 472 IEDTIKANP 480 (557)
Q Consensus 472 v~~v~~~~~ 480 (557)
|++++...+
T Consensus 82 i~~~~~~~~ 90 (345)
T 3t6p_A 82 VDEIQGRYP 90 (345)
T ss_dssp HHHHHHHST
T ss_pred HHHHHHhCc
Confidence 999886544
No 31
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=99.46 E-value=5e-14 Score=115.80 Aligned_cols=64 Identities=39% Similarity=0.945 Sum_probs=60.0
Q ss_pred ccChHHHHHHHHhccccccccccccceEEecCCccccchhhhcCCCCCCCCccccccEEEEeeC
Q psy2747 494 VKSLEEEVRRLREARLCKICMDKEVGVVLLPCGHLVTCVLCASSLPRCPVCRENIKATVRTFLS 557 (557)
Q Consensus 494 ~~~~~~~~~~~~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~~~CP~CR~~i~~~i~i~~s 557 (557)
..+++++++.+.+...|+||++..++++++||||.++|..|+..+..||+||++|...+++|++
T Consensus 5 ~~~l~~~~~~l~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~~p 68 (79)
T 2yho_A 5 TRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYLP 68 (79)
T ss_dssp -CTHHHHHHHHHHHTBCTTTSSSBCCEEEETTCBCCBCHHHHTTCSBCTTTCCBCCEEEECBCT
T ss_pred HHHHHHHHHcCCCCCEeEEeCcccCcEEEECCCCHHHHHHHHHhcCcCCCCCchhhCeEEEEeC
Confidence 3568899999999999999999999999999999999999999999999999999999999974
No 32
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.43 E-value=1.1e-13 Score=112.22 Aligned_cols=65 Identities=46% Similarity=0.987 Sum_probs=59.6
Q ss_pred cccChHHHHHHHHhccccccccccccceEEecCCccccchhhhcCCCCCCCCccccccEEEEeeC
Q psy2747 493 FVKSLEEEVRRLREARLCKICMDKEVGVVLLPCGHLVTCVLCASSLPRCPVCRENIKATVRTFLS 557 (557)
Q Consensus 493 ~~~~~~~~~~~~~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~~~CP~CR~~i~~~i~i~~s 557 (557)
...+++++++.+.+...|.||++...+.+++||||.++|..|+..+..||+||++|...++||+|
T Consensus 10 ~~~~~~~~~~~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~~S 74 (74)
T 4ic3_A 10 KEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKILMS 74 (74)
T ss_dssp -CCCHHHHHHHHHHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTCSBCTTTCCBCSEEEECBC-
T ss_pred ccccHHHHHhcCccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcCccCCCcCcCccCcEEEeeC
Confidence 34567788888999999999999999999999999999999999999999999999999999987
No 33
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=99.34 E-value=2.4e-13 Score=106.80 Aligned_cols=52 Identities=31% Similarity=0.821 Sum_probs=48.3
Q ss_pred hccccccccccccceEEe--cCCccccchhhhcCCC----CCCCCccccccEEEEeeC
Q psy2747 506 EARLCKICMDKEVGVVLL--PCGHLVTCVLCASSLP----RCPVCRENIKATVRTFLS 557 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~--PCgH~~~C~~Ca~~~~----~CP~CR~~i~~~i~i~~s 557 (557)
....|+||+++.++++++ ||||+++|..|+..+. +||+||++|..+++||+|
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~s 63 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA 63 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEEEEEEC
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceEEEecC
Confidence 467899999999998888 9999999999999885 999999999999999987
No 34
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=2.9e-13 Score=109.98 Aligned_cols=63 Identities=49% Similarity=1.072 Sum_probs=58.8
Q ss_pred cChHHHHHHHHhccccccccccccceEEecCCccccchhhhcCCCCCCCCccccccEEEEeeC
Q psy2747 495 KSLEEEVRRLREARLCKICMDKEVGVVLLPCGHLVTCVLCASSLPRCPVCRENIKATVRTFLS 557 (557)
Q Consensus 495 ~~~~~~~~~~~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~~~CP~CR~~i~~~i~i~~s 557 (557)
...+++++++.+...|.||++..++.+++||||.++|..|+..+..||+||.+|...++||+|
T Consensus 13 ~~~~~~~~~~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~~S 75 (75)
T 2ecg_A 13 ISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS 75 (75)
T ss_dssp CCHHHHHHHHHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHHHHCSBCTTTCCBCCCCCBCCCC
T ss_pred cChHHHHHcCCCCCCCCcCCCCCCCEEEecCCCHHHHHHHhhCCCCCccCCceecCcEEEecC
Confidence 456778888888899999999999999999999999999999999999999999999999987
No 35
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=3.6e-13 Score=107.44 Aligned_cols=52 Identities=29% Similarity=0.702 Sum_probs=49.1
Q ss_pred hccccccccccccceEEecCCccccchhhhcCCCCCCCCccccccEEEEeeC
Q psy2747 506 EARLCKICMDKEVGVVLLPCGHLVTCVLCASSLPRCPVCRENIKATVRTFLS 557 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~~~CP~CR~~i~~~i~i~~s 557 (557)
+...|+||+++.++++|+||||+++|..|+..+..||+||++|..+++||.+
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~CR~~i~~~~~i~~~ 65 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALSGP 65 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHHHCSSCTTTCCCCCCEECCCSS
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHhcCCCCCCCCcchhceEEeecC
Confidence 4678999999999999999999999999999999999999999999999863
No 36
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=99.30 E-value=4.8e-13 Score=105.39 Aligned_cols=52 Identities=35% Similarity=0.791 Sum_probs=48.2
Q ss_pred hccccccccccccceEEe--cCCccccchhhhcCC----CCCCCCccccccEEEEeeC
Q psy2747 506 EARLCKICMDKEVGVVLL--PCGHLVTCVLCASSL----PRCPVCRENIKATVRTFLS 557 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~--PCgH~~~C~~Ca~~~----~~CP~CR~~i~~~i~i~~s 557 (557)
+...|+||+++.++++|+ ||||+++|..|+..+ ..||+||++|..++++|+|
T Consensus 7 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~~ 64 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP 64 (64)
T ss_dssp GGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEEEEECC
T ss_pred CcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceEeeecC
Confidence 567899999999999998 999999999999877 3699999999999999986
No 37
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.26 E-value=5.6e-07 Score=81.24 Aligned_cols=49 Identities=33% Similarity=0.752 Sum_probs=41.6
Q ss_pred HHHhccccccccccccceEEecCCccccchhhhcCC----CCCCCCccccccEE
Q psy2747 503 RLREARLCKICMDKEVGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKATV 552 (557)
Q Consensus 503 ~~~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~~i 552 (557)
.+.++..|.||++.-.+.+++||||. +|..|.... ..||+||.+|....
T Consensus 49 ~~~~~~~C~iC~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 101 (138)
T 4ayc_A 49 VLENELQCIICSEYFIEAVTLNCAHS-FCSYCINEWMKRKIECPICRKDIKSKT 101 (138)
T ss_dssp HHHHHSBCTTTCSBCSSEEEETTSCE-EEHHHHHHHTTTCSBCTTTCCBCCCEE
T ss_pred hccccCCCcccCcccCCceECCCCCC-ccHHHHHHHHHcCCcCCCCCCcCCCCC
Confidence 34456789999999999999999996 899998753 68999999997654
No 38
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=5.6e-07 Score=71.53 Aligned_cols=44 Identities=39% Similarity=0.893 Sum_probs=39.1
Q ss_pred hccccccccccccceEEecCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 506 EARLCKICMDKEVGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
+...|.||++...+.+++||||. +|..|.... ..||+||..|..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSLPCKHV-FCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SCCBCSSSSSBCSSEEEETTTEE-EEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCccCCcccCCCEEccCCCH-HHHHHHHHHHHCCCcCcCcCchhCH
Confidence 45689999999999999999999 899999865 689999999864
No 39
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.20 E-value=3.5e-07 Score=70.65 Aligned_cols=49 Identities=33% Similarity=0.759 Sum_probs=40.3
Q ss_pred ccccccccccccce-------EEecCCccccchhhhcCC----CCCCCCccccc--cEEEEee
Q psy2747 507 ARLCKICMDKEVGV-------VLLPCGHLVTCVLCASSL----PRCPVCRENIK--ATVRTFL 556 (557)
Q Consensus 507 ~~~C~IC~~~~~~~-------~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~--~~i~i~~ 556 (557)
...|.||++.-.+. +++||||. +|..|.... ..||+||+++. .+.++|+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~l 64 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 64 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCE-EEHHHHHHHHHHCSBCTTTCCBCTTTCEEECCC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCc-hhHHHHHHHHHcCCCCCCCCccCCccceeeeeC
Confidence 56899999876553 88899999 899999754 68999999988 5677775
No 40
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.20 E-value=3.5e-07 Score=71.84 Aligned_cols=49 Identities=33% Similarity=0.862 Sum_probs=41.7
Q ss_pred hccccccccccccc-eEEecCCccccchhhhcCC----CCCCCCccccccEEEEe
Q psy2747 506 EARLCKICMDKEVG-VVLLPCGHLVTCVLCASSL----PRCPVCRENIKATVRTF 555 (557)
Q Consensus 506 ~~~~C~IC~~~~~~-~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~~i~i~ 555 (557)
+...|.||++...+ ++++||||. +|..|.... ..||+||+++...++.+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 57 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHA-FCYVCITRWIRQNPTCPLCKVPVESVVHTI 57 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEE-ESTTHHHHHHHHSCSTTTTCCCCCCEECCC
T ss_pred CCCCCeeCCccccCCcEecCCCCe-eHHHHHHHHHhCcCcCcCCChhhHhhhhcc
Confidence 35689999999888 588999999 899999753 78999999999877654
No 41
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.17 E-value=1.3e-07 Score=74.87 Aligned_cols=50 Identities=30% Similarity=0.754 Sum_probs=42.5
Q ss_pred HhccccccccccccceEEecCCccccchhhhcCC----CCCCCCccccccEEEEee
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKATVRTFL 556 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~~i~i~~ 556 (557)
.+...|.||++...+ +++||||. +|..|.... ..||+||.++.....+|.
T Consensus 13 ~~~~~C~IC~~~~~~-~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 66 (70)
T 2ecn_A 13 TDEEECCICMDGRAD-LILPCAHS-FCQKCIDKWSDRHRNCPICRLQMTGANESSG 66 (70)
T ss_dssp CCCCCCSSSCCSCCS-EEETTTEE-ECHHHHHHSSCCCSSCHHHHHCTTCCCCCCC
T ss_pred CCCCCCeeCCcCccC-cccCCCCc-ccHHHHHHHHHCcCcCCCcCCcccCCCcccc
Confidence 356789999999988 88999999 899999864 689999999987765553
No 42
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=8.6e-07 Score=70.55 Aligned_cols=45 Identities=31% Similarity=0.890 Sum_probs=39.2
Q ss_pred HhccccccccccccceEEecCCccccchhhhcCC-------CCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-------PRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-------~~CP~CR~~i~~ 550 (557)
.+...|.||++...+.+++||||. +|..|.... ..||+||+++..
T Consensus 18 ~~~~~C~IC~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTIDCGHN-FCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCBCTTTCSBCSSEEECTTCCE-EEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred ccCCEeccCCcccCCeEEcCCCCh-hhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 456789999999999999999999 899999754 379999998864
No 43
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.09 E-value=4.3e-07 Score=71.87 Aligned_cols=50 Identities=32% Similarity=0.746 Sum_probs=39.7
Q ss_pred hccccccccccccce-------EEecCCccccchhhhcCC----CCCCCCcccccc--EEEEee
Q psy2747 506 EARLCKICMDKEVGV-------VLLPCGHLVTCVLCASSL----PRCPVCRENIKA--TVRTFL 556 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~-------~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~--~i~i~~ 556 (557)
+...|.||++.-.+. +++||||. +|..|.... ..||+||+++.. +.++|+
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~l 71 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 71 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCE-EEHHHHHHHHHHCSBCTTTCCBCCCCSCCCCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCCh-HhHHHHHHHHHcCCCCCCCCCccChhheeeccC
Confidence 467899999876554 88999998 899999754 699999999874 455553
No 44
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.05 E-value=1.5e-06 Score=65.15 Aligned_cols=44 Identities=32% Similarity=0.753 Sum_probs=36.7
Q ss_pred hccccccccccccc----eEEecCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 506 EARLCKICMDKEVG----VVLLPCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~~~----~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
+...|.||++.-.+ ++++||||. +|..|.... ..||+||++|.+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~g 55 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHL-LHRTCYEEMLKEGYRCPLCSGPSSG 55 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCE-EETTHHHHHHHHTCCCTTSCCSSCC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCc-ccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 35689999987644 889999997 899999765 789999998863
No 45
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.01 E-value=2.8e-06 Score=75.02 Aligned_cols=54 Identities=20% Similarity=0.474 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhccccccccccccceEEecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 496 SLEEEVRRLREARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 496 ~~~~~~~~~~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
.++..+..+.+...|.||++.-.+.+.+||||. +|..|.... ..||+||.++..
T Consensus 41 ~~~~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 41 PFQLFLSKVEETFQCICCQELVFRPITTVCQHN-VCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHHHHHHHHHHTBCTTTSSBCSSEEECTTSCE-EEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred hHHHHHHhCccCCCCCcCChHHcCcEEeeCCCc-ccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 344556667778899999999999999999999 899999643 489999999865
No 46
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.00 E-value=4.4e-06 Score=87.54 Aligned_cols=49 Identities=41% Similarity=0.897 Sum_probs=43.2
Q ss_pred ccccccccccccceEEecCCccccchhhhc-----CCCCCCCCccccccEEEEee
Q psy2747 507 ARLCKICMDKEVGVVLLPCGHLVTCVLCAS-----SLPRCPVCRENIKATVRTFL 556 (557)
Q Consensus 507 ~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~-----~~~~CP~CR~~i~~~i~i~~ 556 (557)
...|.||++...+.+++||||. +|..|.. ....||+||++|.....|.+
T Consensus 332 ~~~C~ICle~~~~pv~lpCGH~-FC~~Ci~~wl~~~~~~CP~CR~~i~~~~~i~v 385 (389)
T 2y1n_A 332 FQLCKICAENDKDVKIEPCGHL-MCTSCLTSWQESEGQGCPFCRCEIKGTEPIVV 385 (389)
T ss_dssp SSBCTTTSSSBCCEEEETTCCE-ECHHHHHHHHHHTCSBCTTTCCBCCEEEECSC
T ss_pred CCCCCccCcCCCCeEEeCCCCh-hhHHHHHHHHhcCCCCCCCCCCccCCceeEec
Confidence 3689999999999999999999 6999997 35799999999999877654
No 47
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.99 E-value=1.2e-06 Score=68.66 Aligned_cols=45 Identities=36% Similarity=0.809 Sum_probs=37.4
Q ss_pred Hhccccccccccccce-------EEecCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGV-------VLLPCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~-------~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
.+...|.||++...+. +++||||. +|..|.... ..||+||.+|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCE-EEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCCh-hcHHHHHHHHHcCCCCCCCCCccCc
Confidence 3567899999876654 88999997 899999764 689999999864
No 48
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.98 E-value=2.3e-06 Score=69.74 Aligned_cols=45 Identities=29% Similarity=0.572 Sum_probs=39.1
Q ss_pred hccccccccccccceEEecCCccccchhhhcCC----CCCCCCccccccE
Q psy2747 506 EARLCKICMDKEVGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKAT 551 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~~ 551 (557)
+...|.||++...+.+++||||. +|..|.... ..||+||.++...
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVVTKCRHY-FCESCALEHFRATPRCYICDQPTGGI 62 (81)
T ss_dssp CCSBCSSSCSBCCSEEECTTSCE-EEHHHHHHHHHHCSBCSSSCCBCCSC
T ss_pred CCCCCcCCCchhcCeeEccCCCH-hHHHHHHHHHHCCCcCCCcCcccccc
Confidence 35689999999999999999998 799999764 6899999998743
No 49
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=97.96 E-value=2.5e-06 Score=63.96 Aligned_cols=43 Identities=28% Similarity=0.735 Sum_probs=35.8
Q ss_pred hccccccccccccc---eEEec-CCccccchhhhcCC----CCCCCCccccc
Q psy2747 506 EARLCKICMDKEVG---VVLLP-CGHLVTCVLCASSL----PRCPVCRENIK 549 (557)
Q Consensus 506 ~~~~C~IC~~~~~~---~~~~P-CgH~~~C~~Ca~~~----~~CP~CR~~i~ 549 (557)
+...|.||++.-.+ ++.+| |||. +|..|.... ..||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~-f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHG-FHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCE-ECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCc-ccHHHHHHHHHcCCcCcCCCCEeE
Confidence 45689999987665 77787 9998 899999764 68999999874
No 50
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.95 E-value=2.1e-06 Score=65.17 Aligned_cols=44 Identities=27% Similarity=0.620 Sum_probs=38.3
Q ss_pred hccccccccccccceEEecCCccccchhhhcCC-CCCCCCcccccc
Q psy2747 506 EARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-~~CP~CR~~i~~ 550 (557)
+...|.||++.-.+.+++||||. +|..|.... ..||+||+.+..
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~-fC~~Ci~~~~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHT-LCSGCLEASGMQCPICQAPWPL 49 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCC-SBTTTCSSSSSSCSSCCSSSSC
T ss_pred cCCCceEeCCccCCeEEcCCCCc-ccHHHHccCCCCCCcCCcEeec
Confidence 45689999999999999999998 899998765 589999998763
No 51
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.94 E-value=2.4e-06 Score=68.02 Aligned_cols=46 Identities=28% Similarity=0.601 Sum_probs=39.0
Q ss_pred HhccccccccccccceEEe-cCCccccchhhhcCC----CCCCCCccccccE
Q psy2747 505 REARLCKICMDKEVGVVLL-PCGHLVTCVLCASSL----PRCPVCRENIKAT 551 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~-PCgH~~~C~~Ca~~~----~~CP~CR~~i~~~ 551 (557)
.+...|.||++...+.+.+ ||||. +|..|.... ..||+||.++...
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (72)
T 2djb_A 13 TPYILCSICKGYLIDATTITECLHT-FCKSCIVRHFYYSNRCPKCNIVVHQT 63 (72)
T ss_dssp CGGGSCTTTSSCCSSCEECSSSCCE-ECHHHHHHHHHHCSSCTTTCCCCCSS
T ss_pred CCCCCCCCCChHHHCcCEECCCCCH-HHHHHHHHHHHcCCcCCCcCcccCcc
Confidence 4567899999999888876 99999 799999653 6999999998753
No 52
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=97.93 E-value=2.4e-06 Score=68.90 Aligned_cols=45 Identities=31% Similarity=0.710 Sum_probs=38.5
Q ss_pred HhccccccccccccceEEecCCccccchhhhcC-----------CCCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASS-----------LPRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~-----------~~~CP~CR~~i~~ 550 (557)
.+...|.||++...+.+.+||||. +|..|... ...||+||.++..
T Consensus 10 ~~~~~C~IC~~~~~~p~~l~CgH~-fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 10 QEEVTCPICLELLTEPLSLDCGHS-LCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCEETTTTEECSSCCCCSSSCC-CCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred ccCCCCcCCCcccCCeeECCCCCH-HHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 356789999999988888999998 89999985 3589999998853
No 53
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.91 E-value=3.5e-06 Score=72.68 Aligned_cols=53 Identities=25% Similarity=0.716 Sum_probs=43.2
Q ss_pred hHHHHHHHHhccccccccccccceEEecCCccccchhhhcCC-------CCCCCCcccccc
Q psy2747 497 LEEEVRRLREARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-------PRCPVCRENIKA 550 (557)
Q Consensus 497 ~~~~~~~~~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-------~~CP~CR~~i~~ 550 (557)
+++.+..+.+...|.||++...+.+.+||||. +|..|.... ..||+||.++..
T Consensus 11 ~~~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 11 VQNVINAMQKILECPICLELIKEPVSTKCDHI-FCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHHHHHHHHHHTSCSSSCCCCSSCCBCTTSCC-CCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred HHHHHHhccCCCCCcccChhhcCeEECCCCCH-HHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 34445566678899999999999888999998 899998753 279999998864
No 54
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.89 E-value=3.2e-06 Score=69.61 Aligned_cols=45 Identities=40% Similarity=0.840 Sum_probs=38.0
Q ss_pred Hhccccccccccccc----eEEecCCccccchhhhcCC-------CCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVG----VVLLPCGHLVTCVLCASSL-------PRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~----~~~~PCgH~~~C~~Ca~~~-------~~CP~CR~~i~~ 550 (557)
.+...|.||++.-.+ .+++||||. +|..|...+ ..||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHT-ICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCE-EEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred cCCCCCccCCccccccCCCeEECCCCCh-hhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 356789999998887 888999998 899999754 589999997653
No 55
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=97.87 E-value=5.7e-06 Score=70.38 Aligned_cols=51 Identities=31% Similarity=0.695 Sum_probs=43.5
Q ss_pred HHHHHHHhccccccccccccceEE-ecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 499 EEVRRLREARLCKICMDKEVGVVL-LPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 499 ~~~~~~~~~~~C~IC~~~~~~~~~-~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
.....+.+...|.||++...+.+. +||||. +|..|.... ..||+||.++..
T Consensus 14 ~~~~~l~~~~~C~IC~~~~~~p~~~~~CgH~-FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 14 QSVESIAEVFRCFICMEKLRDARLCPHCSKL-CCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHHHHHHHHTBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cccccCCCCCCCccCCccccCccccCCCCCh-hhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 445667788899999999999999 999999 899999753 589999998753
No 56
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=97.87 E-value=3.9e-06 Score=66.05 Aligned_cols=46 Identities=35% Similarity=0.806 Sum_probs=37.2
Q ss_pred hcccccccccc---ccceEEecCCccccchhhhcCC----CCCCCCccccccEE
Q psy2747 506 EARLCKICMDK---EVGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKATV 552 (557)
Q Consensus 506 ~~~~C~IC~~~---~~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~~i 552 (557)
+...|.||++. ...++.+||||. +|..|.... ..||+||.+|...+
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHL-FHQVCVDQWLITNKKCPICRVDIEAQL 65 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCE-EEHHHHHHHHHHCSBCTTTCSBSCSCC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCH-HHHHHHHHHHHcCCCCcCcCccccCcC
Confidence 45689999764 356788999999 899999754 68999999987643
No 57
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.87 E-value=4.7e-06 Score=67.87 Aligned_cols=45 Identities=31% Similarity=0.637 Sum_probs=39.0
Q ss_pred HhccccccccccccceEEecCCccccchhhhcC----------CCCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASS----------LPRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~----------~~~CP~CR~~i~~ 550 (557)
.+...|.||++...+.+++||||. +|..|... ...||+||.++..
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVSADCNHS-FCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CTTTSCTTTCSCCSSCEECTTSCC-BCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred ccCCCCcCCChhhCcceeCCCCCH-HHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 346789999999999899999998 89999975 4689999998864
No 58
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.86 E-value=3.3e-06 Score=65.73 Aligned_cols=43 Identities=28% Similarity=0.684 Sum_probs=33.8
Q ss_pred ccccccccc-cccc----eEEecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 507 ARLCKICMD-KEVG----VVLLPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 507 ~~~C~IC~~-~~~~----~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
+..|.||++ .-.+ .+++||||. +|..|..++ ..||+||.++..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHT-LCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCC-EEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCH-hHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 467999999 2222 256799999 899998765 579999999864
No 59
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.85 E-value=2.3e-06 Score=66.87 Aligned_cols=45 Identities=29% Similarity=0.668 Sum_probs=38.5
Q ss_pred HhccccccccccccceEEecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
.+...|.||++...+.+.+||||. +|..|.... ..||+||+++..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQTECGHR-FCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CCCEECTTTCCEESSCCCCSSSCC-CCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred CcCCCCCCCChHhcCeeECCCCCH-HHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 346789999999888888999999 899999743 589999999864
No 60
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.84 E-value=2.4e-06 Score=68.20 Aligned_cols=48 Identities=21% Similarity=0.531 Sum_probs=38.2
Q ss_pred Hhccccccccccc---cceEEecCCccccchhhhcCC----CCCCCCccccccEEE
Q psy2747 505 REARLCKICMDKE---VGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKATVR 553 (557)
Q Consensus 505 ~~~~~C~IC~~~~---~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~~i~ 553 (557)
.+...|.||++.- ..++.+||||. +|..|.... ..||+||.+|....+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~-f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 67 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHA-FHRKCLIKWLEVRKVCPLCNMPVLQLAQ 67 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEE-EEHHHHHHHHHHCSBCTTTCCBCSSCCS
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCE-ecHHHHHHHHHcCCcCCCcCcccccccc
Confidence 3467899999763 45667799999 899999754 689999999987543
No 61
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=97.83 E-value=6.5e-06 Score=69.63 Aligned_cols=49 Identities=22% Similarity=0.682 Sum_probs=40.9
Q ss_pred HHHHHhccccccccccccceEEe-cCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 501 VRRLREARLCKICMDKEVGVVLL-PCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 501 ~~~~~~~~~C~IC~~~~~~~~~~-PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
++.+.+...|.||++.-.+.+.+ ||||. +|..|.... ..||+||.++..
T Consensus 16 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 16 MKTIDDLLRCGICFEYFNIAMIIPQCSHN-YCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp GHHHHHHTBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred HHhCCCCCCcccCChhhCCcCEECCCCCH-hhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 34455678999999998888888 99999 899998653 689999998874
No 62
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.82 E-value=9.2e-06 Score=69.88 Aligned_cols=49 Identities=20% Similarity=0.584 Sum_probs=41.9
Q ss_pred HHHHHhccccccccccccceEEe-cCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 501 VRRLREARLCKICMDKEVGVVLL-PCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 501 ~~~~~~~~~C~IC~~~~~~~~~~-PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
+..+.+...|.||++.-.+.+.+ ||||. +|..|.... ..||+||..+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 9 ITELNPHLMCVLCGGYFIDATTIIECLHS-FCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp HHHHGGGTBCTTTSSBCSSEEEETTTCCE-EEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred hhccCCcCCCccCChHHhCcCEeCCCCCh-hhHHHHHHHHHhCCcCcCCCccccc
Confidence 34566788999999999999888 99999 899999754 689999999874
No 63
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.82 E-value=4.2e-06 Score=67.48 Aligned_cols=44 Identities=32% Similarity=0.744 Sum_probs=35.7
Q ss_pred hcccccccccc---ccceEEecCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 506 EARLCKICMDK---EVGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~---~~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
+...|.||++. ...++.+||||. +|..|.... ..||+||+++..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHL-FHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCE-EETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCe-ecHHHHHHHHHcCCcCcCcCCccCC
Confidence 46789999654 455677899998 899999753 689999999875
No 64
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.82 E-value=4.2e-06 Score=68.14 Aligned_cols=45 Identities=33% Similarity=0.793 Sum_probs=38.9
Q ss_pred HhccccccccccccceEEecCCccccchhhhcC----------CCCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASS----------LPRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~----------~~~CP~CR~~i~~ 550 (557)
.+...|.||++...+.+.+||||. +|..|... ...||+||..+..
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSLDCGHS-FCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCCSSSCC-BCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred cCCCCCCCCCcccCCceeCCCCCH-HHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 356789999999999888999998 89999975 4689999998874
No 65
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=97.81 E-value=8e-06 Score=74.84 Aligned_cols=49 Identities=24% Similarity=0.593 Sum_probs=41.4
Q ss_pred HHHHHhccccccccccccceEEecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 501 VRRLREARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 501 ~~~~~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
+..+.+...|.||++...+.+.+||||. +|..|.... ..||+||.++..
T Consensus 72 ~~~l~~~~~C~IC~~~~~~pv~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 72 LKKLEQSFMCVCCQELVYQPVTTECFHN-VCKDCLQRSFKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHHHHHHTBCTTTSSBCSSEEECTTSCE-EEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred HHhCccCCEeecCChhhcCCEEcCCCCc-hhHHHHHHHHHhCCCcCCCCCccCCC
Confidence 3445567899999999999999999998 899999754 379999999875
No 66
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=97.78 E-value=5.2e-06 Score=69.37 Aligned_cols=44 Identities=34% Similarity=0.656 Sum_probs=36.3
Q ss_pred hccccccccccccc---eEEecCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 506 EARLCKICMDKEVG---VVLLPCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~~~---~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
+...|.||++.-.. ++.+||||. +|..|.... ..||+||..+..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~-Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHY-FHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEE-EEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCCCcccChhhcCCCcEEecCCCCh-HHHHHHHHHHHcCCcCcCcCccCCC
Confidence 45689999976555 788999997 899998753 689999998864
No 67
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.77 E-value=5.3e-06 Score=66.46 Aligned_cols=44 Identities=32% Similarity=0.717 Sum_probs=35.7
Q ss_pred hccccccccccc---cceEEecCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 506 EARLCKICMDKE---VGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~---~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
+...|.||++.- ..++.+||||. +|..|.... ..||+||+++..
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~-fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHE-FHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEE-EETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCH-hHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 456899999653 34578899998 899999764 689999998864
No 68
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=97.76 E-value=7.2e-06 Score=65.65 Aligned_cols=44 Identities=34% Similarity=0.798 Sum_probs=38.1
Q ss_pred HhccccccccccccceEEec-CCccccchhhhcCC------CCCCCCccccc
Q psy2747 505 REARLCKICMDKEVGVVLLP-CGHLVTCVLCASSL------PRCPVCRENIK 549 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~P-CgH~~~C~~Ca~~~------~~CP~CR~~i~ 549 (557)
.+...|.||++.-.+.+.+| |||. +|..|.... ..||+||+++.
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 13 PDELLCLICKDIMTDAVVIPCCGNS-YCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp CGGGSCSSSCCCCTTCEECSSSCCE-ECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCCcCCChHHhCCeEcCCCCCH-HHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 45678999999999999999 9998 899999654 48999999754
No 69
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.74 E-value=1.3e-05 Score=70.07 Aligned_cols=51 Identities=29% Similarity=0.571 Sum_probs=44.1
Q ss_pred HHHHHHHHhccccccccccccceEEe-cCCccccchhhhcCC--CCCCCCccccc
Q psy2747 498 EEEVRRLREARLCKICMDKEVGVVLL-PCGHLVTCVLCASSL--PRCPVCRENIK 549 (557)
Q Consensus 498 ~~~~~~~~~~~~C~IC~~~~~~~~~~-PCgH~~~C~~Ca~~~--~~CP~CR~~i~ 549 (557)
.+.+..+.+...|.||++.-.+.+.+ ||||. +|..|.... ..||+||.++.
T Consensus 13 ~~~~~~l~~~~~C~IC~~~~~~pv~~~~CgH~-fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 13 RAALDRLEKLLRCSRCTNILREPVCLGGCEHI-FCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HHHHHHHHHTTSCSSSCSCCSSCBCCCSSSCC-BCTTTGGGGTTTBCSSSCCBCS
T ss_pred HHHHHhchhCCCCCCCChHhhCccEeCCCCCH-HHHHHHHHHhcCCCcCCCCcCc
Confidence 34566677889999999999999998 99999 899999876 57999999885
No 70
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.73 E-value=4.2e-06 Score=68.13 Aligned_cols=47 Identities=26% Similarity=0.719 Sum_probs=37.5
Q ss_pred Hhccccccccccc--cceEEec--CCccccchhhhcCC-----CCCCCCccccccEE
Q psy2747 505 REARLCKICMDKE--VGVVLLP--CGHLVTCVLCASSL-----PRCPVCRENIKATV 552 (557)
Q Consensus 505 ~~~~~C~IC~~~~--~~~~~~P--CgH~~~C~~Ca~~~-----~~CP~CR~~i~~~i 552 (557)
.++..|.||++.. .+.+++| |||. +|..|...+ ..||+||+++....
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~-fC~~Cl~~~~~~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQ-ICRFCWHRIRTDENGLCPACRKPYPEDP 64 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCC-CCHHHHHHHTTSSCSBCTTTCCBCSSCS
T ss_pred ccCCcCCccCccCccccccccccCCCCC-cCHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 4567899999965 3566777 9998 899998765 48999999987643
No 71
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.73 E-value=1.3e-05 Score=69.78 Aligned_cols=44 Identities=39% Similarity=0.817 Sum_probs=38.2
Q ss_pred hccccccccccccceEEecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 506 EARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
+...|.||++.-.+.+.+||||. +|..|.... ..||+||..+..
T Consensus 14 ~~~~C~iC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 14 SECQCGICMEILVEPVTLPCNHT-LCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHBCTTTCSBCSSCEECTTSCE-ECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCccCCcccCceeEcCCCCH-HhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 35679999999999999999999 899999765 489999998753
No 72
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=97.62 E-value=1.3e-05 Score=66.73 Aligned_cols=43 Identities=35% Similarity=0.829 Sum_probs=37.6
Q ss_pred HhccccccccccccceEEec-CCccccchhhhcCC------CCCCCCcccc
Q psy2747 505 REARLCKICMDKEVGVVLLP-CGHLVTCVLCASSL------PRCPVCRENI 548 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~P-CgH~~~C~~Ca~~~------~~CP~CR~~i 548 (557)
.+...|.||++.-.+.+.+| |||. +|..|.... ..||+||.++
T Consensus 11 ~~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVIPCCGNS-YCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CTTTEETTTTEECSSCEECTTTCCE-ECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred CcCCCCCCCChhhcCceECCCCCCH-HHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 35678999999999999999 9999 899998643 5899999986
No 73
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=97.60 E-value=1.6e-05 Score=64.08 Aligned_cols=45 Identities=18% Similarity=0.249 Sum_probs=38.6
Q ss_pred HhccccccccccccceEEecCCccccchhhhcC-----CCCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASS-----LPRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~-----~~~CP~CR~~i~~ 550 (557)
.+...|.||++--.+.+.+||||. +|..|... ...||+||.++..
T Consensus 6 ~~~~~C~IC~~~~~~Pv~~~CgH~-fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 6 PEYFRCPISLELMKDPVIVSTGQT-YERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SSSSSCTTTSCCCSSEEEETTTEE-EEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred cccCCCCCccccccCCEEcCCCCe-ecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 346789999999999999999999 89999864 3579999999864
No 74
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.56 E-value=2.9e-05 Score=67.50 Aligned_cols=46 Identities=28% Similarity=0.563 Sum_probs=39.6
Q ss_pred HHhccccccccccccceEEecCCccccchhhhcC-----CCCCCCCcccccc
Q psy2747 504 LREARLCKICMDKEVGVVLLPCGHLVTCVLCASS-----LPRCPVCRENIKA 550 (557)
Q Consensus 504 ~~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~-----~~~CP~CR~~i~~ 550 (557)
+.+...|.||++...+.+.+||||. +|..|... -..||+||.++..
T Consensus 20 ~~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 20 FVKSISCQICEHILADPVETSCKHL-FCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred ccCCCCCCCCCcHhcCcEEcCCCCc-ccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 3456789999999999999999999 89999864 3589999999864
No 75
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.54 E-value=2e-05 Score=72.95 Aligned_cols=46 Identities=28% Similarity=0.704 Sum_probs=38.6
Q ss_pred HHhccccccccccccceEEe-cCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 504 LREARLCKICMDKEVGVVLL-PCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 504 ~~~~~~C~IC~~~~~~~~~~-PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
+.+...|.||++.-.+.+.+ ||||. +|..|.... ..||+||.++..
T Consensus 51 ~~~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 51 LHSELMCPICLDMLKNTMTTKECLHR-FCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp CHHHHBCTTTSSBCSSEEEETTTCCE-EEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCCCCcccChHhhCcCEeCCCCCh-hHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 34567899999999998887 99998 899999753 579999999853
No 76
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.50 E-value=1.8e-05 Score=59.78 Aligned_cols=39 Identities=31% Similarity=0.820 Sum_probs=33.7
Q ss_pred HhccccccccccccceEEecCCccccchhhhcCC-------CCCCCC
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-------PRCPVC 544 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-------~~CP~C 544 (557)
.+...|.||++...+.+++||||. +|..|.... ..||+|
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEPVIIECGHN-FCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSSCCCCSSCCC-CCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCccEeCCCCCc-cCHHHHHHHHHhcCCCCCCCCC
Confidence 356789999999999999999999 899998643 689998
No 77
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.50 E-value=2.6e-05 Score=60.11 Aligned_cols=39 Identities=36% Similarity=0.950 Sum_probs=33.9
Q ss_pred HhccccccccccccceEEecCCccccchhhhcCC-------CCCCCC
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-------PRCPVC 544 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-------~~CP~C 544 (557)
.+...|.||++...+.+.+||||. +|..|.... ..||+|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTIDCGHN-FCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEECTTSSE-ECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEeCCCCc-chHHHHHHHHHcCCCCCcCcCC
Confidence 456789999999999999999999 899998653 479998
No 78
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.49 E-value=3e-05 Score=67.81 Aligned_cols=45 Identities=31% Similarity=0.607 Sum_probs=39.3
Q ss_pred HhccccccccccccceEEecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
.+...|.||++.-.+.+.+||||. +|..|.... ..||+||.++..
T Consensus 16 ~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 16 ESKYECPICLMALREAVQTPCGHR-FCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp CGGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCcCChhhcCeEECCcCCh-hhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 456789999999999999999999 899999764 499999999875
No 79
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.34 E-value=5.6e-05 Score=66.59 Aligned_cols=50 Identities=32% Similarity=0.753 Sum_probs=40.5
Q ss_pred hccccccccccccce-------EEecCCccccchhhhcC----CCCCCCCccccc--cEEEEee
Q psy2747 506 EARLCKICMDKEVGV-------VLLPCGHLVTCVLCASS----LPRCPVCRENIK--ATVRTFL 556 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~-------~~~PCgH~~~C~~Ca~~----~~~CP~CR~~i~--~~i~i~~ 556 (557)
+...|.||++.-... +..||||. +|..|... .+.||+||+++. .++++|+
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~ 133 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 133 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTSBE-EEHHHHHHHHHHCSBCTTTCCBCCGGGEEEECC
T ss_pred CCCCCCCCCCccccccccCcceEeCCCCCh-hhHHHHHHHHHcCCCCCCCCCcCChhcceeeeC
Confidence 356799999876553 88899999 89999975 379999999987 4677775
No 80
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.33 E-value=6e-05 Score=66.42 Aligned_cols=44 Identities=36% Similarity=0.828 Sum_probs=36.7
Q ss_pred hccccccccccccce-------EEecCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 506 EARLCKICMDKEVGV-------VLLPCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~-------~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
+...|.||++.-.+. +.+||||. +|..|.... ..||+||+.+..
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 60 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCE-EEHHHHHHHHTTCSBCTTTCCBCTT
T ss_pred CCCCCcccChhhhCccccccCeEecCCCCh-hhHHHHHHHHHhCCCCCCCCCcCcc
Confidence 456899999876654 88999997 899999653 689999998874
No 81
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.30 E-value=8.3e-05 Score=60.63 Aligned_cols=43 Identities=30% Similarity=0.672 Sum_probs=30.8
Q ss_pred ccccccccccccc--------------eEEe-cCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 507 ARLCKICMDKEVG--------------VVLL-PCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 507 ~~~C~IC~~~~~~--------------~~~~-PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
...|.||++.-.+ ++.+ +|||. ++..|.... ..||+||+++..
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~-FH~~Ci~~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHS-FHNCCMSLWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCE-EEHHHHHHHTTTCCBCTTTCCBCCE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCc-cChHHHHHHHHhCCCCCCcCCCcch
Confidence 3457777664432 4444 59999 899999753 689999998754
No 82
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=97.26 E-value=6.4e-05 Score=65.01 Aligned_cols=43 Identities=30% Similarity=0.584 Sum_probs=33.4
Q ss_pred cccccccccccc------------------ceEEecCCccccchhhhcC---------CCCCCCCcccccc
Q psy2747 507 ARLCKICMDKEV------------------GVVLLPCGHLVTCVLCASS---------LPRCPVCRENIKA 550 (557)
Q Consensus 507 ~~~C~IC~~~~~------------------~~~~~PCgH~~~C~~Ca~~---------~~~CP~CR~~i~~ 550 (557)
...|.||++.-. .+.++||||. +|..|... -..||+||+.+..
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~-Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHA-FHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCE-ECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCc-ccHHHHHHHHHcccCCCCCcCCCCCCccCC
Confidence 357999998742 3448899998 89999854 2489999998754
No 83
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=96.98 E-value=5.9e-05 Score=68.29 Aligned_cols=45 Identities=27% Similarity=0.643 Sum_probs=38.8
Q ss_pred HHHhccccccccccccceEEecCCccccchhhhcCC-----CCCCCCcccc
Q psy2747 503 RLREARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-----PRCPVCRENI 548 (557)
Q Consensus 503 ~~~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i 548 (557)
.+.+...|.||++--.+.+..||||. +|..|.... ..||+||.+|
T Consensus 27 ~l~~~~~C~IC~~~~~~pv~~~CgH~-FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 27 KLEAKYLCSACRNVLRRPFQAQCGHR-YCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp GCCGGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHGGGSCEECHHHHHTT
T ss_pred cCCcCcCCCCCChhhcCcEECCCCCc-cCHHHHHHHHhcCCCCCCCCCCcc
Confidence 34567789999999988899999999 899999764 4899999976
No 84
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=96.82 E-value=0.00035 Score=64.80 Aligned_cols=45 Identities=31% Similarity=0.607 Sum_probs=39.5
Q ss_pred HhccccccccccccceEEecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
.+...|.||++.-.+.+..||||. +|..|.... ..||+||.++..
T Consensus 16 ~~~~~C~IC~~~~~~pv~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 16 ESKYECPICLMALREAVQTPCGHR-FCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp CGGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCChhhcCcEECCCCCH-HHHHHHHHHHHhCCCCCCCCccCcch
Confidence 456789999999999999999999 899999764 499999998875
No 85
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=96.67 E-value=0.00063 Score=58.46 Aligned_cols=29 Identities=24% Similarity=0.421 Sum_probs=24.7
Q ss_pred eEEecCCccccchhhhcCC----CCCCCCccccc
Q psy2747 520 VVLLPCGHLVTCVLCASSL----PRCPVCRENIK 549 (557)
Q Consensus 520 ~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~ 549 (557)
++++||||. ++..|.... ..||+||+.+.
T Consensus 68 ~~~~~C~H~-FH~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 68 VAWGVCNHA-FHFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp EEEETTSCE-EEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred EeecccCcE-ECHHHHHHHHHcCCcCcCCCCcce
Confidence 677899999 899999763 68999999853
No 86
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=96.66 E-value=0.0007 Score=55.64 Aligned_cols=45 Identities=16% Similarity=0.076 Sum_probs=39.4
Q ss_pred HhccccccccccccceEEecCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
.+...|.||++--.+-|.+||||. +|..|.... ..||+||.++..
T Consensus 12 p~~~~CpI~~~~m~dPV~~~cGht-f~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDPVRLPSGTV-MDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp CTTTBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred chheECcccCchhcCCeECCCCCE-ECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 457789999999999999999999 899998653 699999998764
No 87
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=96.61 E-value=0.00079 Score=57.17 Aligned_cols=45 Identities=16% Similarity=0.103 Sum_probs=39.3
Q ss_pred HhccccccccccccceEEecCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
.+...|.||++--.+-|.+||||. +|..|.... ..||+||.++..
T Consensus 27 p~~~~CpI~~~~m~dPV~~~cGht-f~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDPVRLPSGTI-MDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp STTTBCTTTCSBCSSEEEETTTEE-EEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred cHhhCCcCccCcccCCeECCCCCE-EchHHHHHHHHcCCCCCCCCCCCCh
Confidence 457799999999999999999999 899998643 689999998764
No 88
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=96.57 E-value=0.0014 Score=55.22 Aligned_cols=44 Identities=25% Similarity=0.629 Sum_probs=32.3
Q ss_pred cccccccccc--eEEecCCccccchhhhc-----CCCCCCCCccccccEEEEe
Q psy2747 510 CKICMDKEVG--VVLLPCGHLVTCVLCAS-----SLPRCPVCRENIKATVRTF 555 (557)
Q Consensus 510 C~IC~~~~~~--~~~~PCgH~~~C~~Ca~-----~~~~CP~CR~~i~~~i~i~ 555 (557)
|.+|- .+.. .-++||.|+ +|.+|+. ..+.||+|+.+|..+-++.
T Consensus 4 C~~C~-~Pi~iygRmIPCkHv-FCydCa~~~~~~~~k~Cp~C~~~V~rVe~~~ 54 (101)
T 3vk6_A 4 CDKCG-LPIKVYGRMIPCKHV-FCYDCAILHEKKGDKMCPGCSDPVQRIEQCT 54 (101)
T ss_dssp CTTTC-SBCSEEEEEETTCCE-EEHHHHHHHHHTTCCBCTTTCCBCSEEEEEE
T ss_pred cCccC-CCeEEEeeecccccc-HHHHHHHHHHhccCCCCcCcCCeeeeeEEec
Confidence 55553 2333 346899995 9999994 4579999999999887653
No 89
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=96.56 E-value=0.00091 Score=56.58 Aligned_cols=45 Identities=16% Similarity=0.049 Sum_probs=39.1
Q ss_pred HhccccccccccccceEEecCC-ccccchhhhcCC----CCCCCCcccccc
Q psy2747 505 REARLCKICMDKEVGVVLLPCG-HLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~PCg-H~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
.++..|.||++--.+-|.+||| |. +|..|.... ..||+||.++..
T Consensus 20 p~~~~CpI~~~~m~dPV~~~cG~ht-f~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCDPVVLPSSRVT-VDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp CTTTBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred cHhcCCcCccccccCCeECCCCCeE-ECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 4577999999999999999999 98 899998643 689999998764
No 90
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.21 E-value=0.0016 Score=64.62 Aligned_cols=44 Identities=16% Similarity=0.051 Sum_probs=37.7
Q ss_pred hccccccccccccceEEecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 506 EARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
+...|.||++--.+-|.+||||. +|..|.... ..||+||.++..
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~-f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGIT-YDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCE-EETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cccCCcCcCCHhcCCeECCCCCE-ECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 35689999999999999999999 899998643 349999998864
No 91
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=96.05 E-value=0.001 Score=58.19 Aligned_cols=29 Identities=24% Similarity=0.421 Sum_probs=0.0
Q ss_pred eEEecCCccccchhhhcCC----CCCCCCccccc
Q psy2747 520 VVLLPCGHLVTCVLCASSL----PRCPVCRENIK 549 (557)
Q Consensus 520 ~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~ 549 (557)
++++||+|. ++..|.... ..||+||+++.
T Consensus 79 v~~~~C~H~-FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 79 VAWGVCNHA-FHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp ----------------------------------
T ss_pred cccCCcCce-EcHHHHHHHHHcCCcCCCCCCeee
Confidence 445699999 899999874 68999999853
No 92
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=95.34 E-value=0.0065 Score=57.01 Aligned_cols=44 Identities=16% Similarity=0.040 Sum_probs=37.7
Q ss_pred hccccccccccccceEEecCCccccchhhhcCC-----CCCCCCcccccc
Q psy2747 506 EARLCKICMDKEVGVVLLPCGHLVTCVLCASSL-----PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~CP~CR~~i~~ 550 (557)
+...|.||++--.+-|.+||||. +|..|.... ..||+||.++..
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ght-fer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGIT-YDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred HhhcccCccccCCCCeECCCCCE-ECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 46789999999999999999998 899997643 369999998764
No 93
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.15 E-value=0.0072 Score=49.07 Aligned_cols=44 Identities=20% Similarity=0.607 Sum_probs=33.9
Q ss_pred hccccccccccc--cceEEecCC-----ccccchhhhcCC------CCCCCCcccccc
Q psy2747 506 EARLCKICMDKE--VGVVLLPCG-----HLVTCVLCASSL------PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~--~~~~~~PCg-----H~~~C~~Ca~~~------~~CP~CR~~i~~ 550 (557)
+...|.||++.. .+.+++||+ |. +-..|.... ..||+||..+..
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~-fH~~Cl~~Wl~~~~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHF-VHQACLQQWIKSSDTRCCELCKYEFIM 70 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCC-EETTHHHHHHHHHCCSBCSSSCCBCCC
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCe-eCHHHHHHHHhhCCCCCCCCCCCeeec
Confidence 356899999642 345678996 98 799999764 489999998764
No 94
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.09 E-value=0.012 Score=49.12 Aligned_cols=41 Identities=22% Similarity=0.374 Sum_probs=35.0
Q ss_pred hccccccccccccceEEec-CCccccchhhhcCC----------CCCCC--Cccc
Q psy2747 506 EARLCKICMDKEVGVVLLP-CGHLVTCVLCASSL----------PRCPV--CREN 547 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~P-CgH~~~C~~Ca~~~----------~~CP~--CR~~ 547 (557)
+...|.||++--.+-|.+| |||. +|..|.... ..||+ |+..
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~-f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHT-YEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCE-EEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred cEeECcCcCchhcCCEEcCCCCCe-ecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 4678999999999999997 9999 899997643 38999 9855
No 95
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=94.88 E-value=0.0052 Score=51.11 Aligned_cols=40 Identities=25% Similarity=0.722 Sum_probs=29.8
Q ss_pred ccccccccccccc--eE-EecCCccccchhhhcCC------------CCCCC--Cccc
Q psy2747 507 ARLCKICMDKEVG--VV-LLPCGHLVTCVLCASSL------------PRCPV--CREN 547 (557)
Q Consensus 507 ~~~C~IC~~~~~~--~~-~~PCgH~~~C~~Ca~~~------------~~CP~--CR~~ 547 (557)
...|.||++.... ++ +.||||. +|..|.... -.||. |+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~-FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCI-FCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEE-EEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccccceEcCCCCCc-ccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 5679999986443 22 3489999 899996431 37999 9987
No 96
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=92.38 E-value=0.039 Score=54.56 Aligned_cols=45 Identities=16% Similarity=0.314 Sum_probs=37.5
Q ss_pred HhccccccccccccceEEe-cCCccccchhhhcCC------CCCCC--Ccccccc
Q psy2747 505 REARLCKICMDKEVGVVLL-PCGHLVTCVLCASSL------PRCPV--CRENIKA 550 (557)
Q Consensus 505 ~~~~~C~IC~~~~~~~~~~-PCgH~~~C~~Ca~~~------~~CP~--CR~~i~~ 550 (557)
.....|.||++.-.+-|.. .|||. +|..|.... ..||+ ||..+..
T Consensus 179 ~~el~CPIcl~~f~DPVts~~CGHs-FcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 179 KIELTCPITCKPYEAPLISRKCNHV-FDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp BCCSBCTTTSSBCSSEEEESSSCCE-EEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred ceeeECcCccCcccCCeeeCCCCCc-ccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 4567899999999999975 99998 899999754 36999 9997653
No 97
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=88.97 E-value=0.2 Score=38.24 Aligned_cols=43 Identities=16% Similarity=0.099 Sum_probs=36.9
Q ss_pred ccccccccccccceEEe-cCCccccchhhhcCC----CCCCCCcccccc
Q psy2747 507 ARLCKICMDKEVGVVLL-PCGHLVTCVLCASSL----PRCPVCRENIKA 550 (557)
Q Consensus 507 ~~~C~IC~~~~~~~~~~-PCgH~~~C~~Ca~~~----~~CP~CR~~i~~ 550 (557)
...|.||.+-..+-|+. +|||. ++..|..+. .+||+++.++..
T Consensus 3 ~~~CpIs~~~m~dPV~~~~sG~~-yer~~I~~~l~~~~~cP~t~~~L~~ 50 (61)
T 2bay_A 3 HMLCAISGKVPRRPVLSPKSRTI-FEKSLLEQYVKDTGNDPITNEPLSI 50 (61)
T ss_dssp -CCCTTTCSCCSSEEEETTTTEE-EEHHHHHHHHHHHSBCTTTCCBCCG
T ss_pred eEEecCCCCCCCCCEEeCCCCcE-EcHHHHHHHHHhCCCCcCCcCCCCh
Confidence 35799999999999999 99999 899999865 679999998754
No 98
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=81.44 E-value=0.29 Score=37.15 Aligned_cols=44 Identities=20% Similarity=0.437 Sum_probs=30.2
Q ss_pred hccccccccccccceEEecCCccc----cchhhhcC------CCCCCCCccccc
Q psy2747 506 EARLCKICMDKEVGVVLLPCGHLV----TCVLCASS------LPRCPVCRENIK 549 (557)
Q Consensus 506 ~~~~C~IC~~~~~~~~~~PCgH~~----~C~~Ca~~------~~~CP~CR~~i~ 549 (557)
+...|.||++...+-++.||.+.. +=..|..+ -..||+|+..+.
T Consensus 5 ~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 456899999876666678976421 23345543 268999999764
No 99
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=71.34 E-value=0.85 Score=37.72 Aligned_cols=46 Identities=30% Similarity=0.826 Sum_probs=36.9
Q ss_pred ccccccccccccceEEecCCccccchhhhcCC----CCCCCCccccccEEEE
Q psy2747 507 ARLCKICMDKEVGVVLLPCGHLVTCVLCASSL----PRCPVCRENIKATVRT 554 (557)
Q Consensus 507 ~~~C~IC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~CP~CR~~i~~~i~i 554 (557)
..-|+.|.-+.++.| -|.-..+|..|...| ..||||..++...+++
T Consensus 28 ~~nCKsCWf~~k~LV--~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~~ 77 (99)
T 2ko5_A 28 PQFCKSCWFENKGLV--ECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRP 77 (99)
T ss_dssp CCCCCSSCSCCSSEE--ECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSCT
T ss_pred cccChhhccccCCee--eecchhhHHHHHHHHHhhccCCcccCCcCCcceec
Confidence 457999998888765 476556999999987 7999999988776553
No 100
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=58.27 E-value=3.1 Score=34.23 Aligned_cols=31 Identities=26% Similarity=0.570 Sum_probs=23.7
Q ss_pred hcccccccccc-ccceEE--ecCCccccchhhhcC
Q psy2747 506 EARLCKICMDK-EVGVVL--LPCGHLVTCVLCASS 537 (557)
Q Consensus 506 ~~~~C~IC~~~-~~~~~~--~PCgH~~~C~~Ca~~ 537 (557)
++..|.||.+. ....+. ++|+|. +|..|...
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~-~C~~Cl~~ 35 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVS-YCDECLKA 35 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEE-ECHHHHHH
T ss_pred CCCCCcCCCCCCCCCceEECCcCChH-HhHHHCHH
Confidence 35689999964 444444 899999 89999875
No 101
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=55.49 E-value=1.9 Score=44.20 Aligned_cols=44 Identities=20% Similarity=0.541 Sum_probs=30.8
Q ss_pred hccccccccccccc-e-----E--EecCCccccchhhhcCC---------------CCCCCCcccccc
Q psy2747 506 EARLCKICMDKEVG-V-----V--LLPCGHLVTCVLCASSL---------------PRCPVCRENIKA 550 (557)
Q Consensus 506 ~~~~C~IC~~~~~~-~-----~--~~PCgH~~~C~~Ca~~~---------------~~CP~CR~~i~~ 550 (557)
....|.||++...+ . + -.+|||. +=..|..+. ..||+||++|..
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~-FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLK-CHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCC-BCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred CCccCcccceeecCCCCCccccccCCccCCc-cchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 45689999975444 1 1 1369998 677787431 479999999864
No 102
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=50.58 E-value=2.2 Score=31.74 Aligned_cols=12 Identities=42% Similarity=1.118 Sum_probs=10.5
Q ss_pred eeeeeecceecC
Q psy2747 39 VQCFACGVKISN 50 (557)
Q Consensus 39 V~Cf~Cg~~l~~ 50 (557)
|+||.||+.|.+
T Consensus 4 VRCFTCGkvi~~ 15 (55)
T 1ef4_A 4 VRCLSCGKPVSA 15 (55)
T ss_dssp SSCSCTTSCCHH
T ss_pred eecCCCCCChhH
Confidence 899999999854
No 103
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.17 E-value=13 Score=29.34 Aligned_cols=43 Identities=26% Similarity=0.627 Sum_probs=29.0
Q ss_pred ccccccccccccceEE-ecCCccccchhhhcC------CCCCCCCcccccc
Q psy2747 507 ARLCKICMDKEVGVVL-LPCGHLVTCVLCASS------LPRCPVCRENIKA 550 (557)
Q Consensus 507 ~~~C~IC~~~~~~~~~-~PCgH~~~C~~Ca~~------~~~CP~CR~~i~~ 550 (557)
...|.||++.-....- .-|+|. +=..|..+ -.+||+||+....
T Consensus 15 i~~C~IC~~~i~~g~~C~~C~h~-fH~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 15 VKICNICHSLLIQGQSCETCGIR-MHLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp SCBCSSSCCBCSSSEECSSSCCE-ECHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred CCcCcchhhHcccCCccCCCCch-hhHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 4679999876543332 267777 55667752 2689999998764
No 104
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=47.35 E-value=2.8 Score=32.36 Aligned_cols=12 Identities=42% Similarity=1.276 Sum_probs=10.4
Q ss_pred eeeeeecceecC
Q psy2747 39 VQCFACGVKISN 50 (557)
Q Consensus 39 V~Cf~Cg~~l~~ 50 (557)
|+||.||+.|.+
T Consensus 5 VRCFTCGkvi~~ 16 (66)
T 4ayb_N 5 IRCFTCGSLIAD 16 (66)
T ss_dssp SBCTTTCCBCHH
T ss_pred cccCCCcHhHHH
Confidence 899999999853
No 105
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=46.86 E-value=4.1 Score=31.86 Aligned_cols=12 Identities=42% Similarity=1.245 Sum_probs=10.9
Q ss_pred eeeeeecceecC
Q psy2747 39 VQCFACGVKISN 50 (557)
Q Consensus 39 V~Cf~Cg~~l~~ 50 (557)
|+||.||+.|.+
T Consensus 5 VRCFTCGkvi~~ 16 (70)
T 1twf_J 5 VRCFSCGKVVGD 16 (70)
T ss_dssp SBCTTTCCBCTT
T ss_pred eecCCCCCChHH
Confidence 899999999965
No 106
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=25.33 E-value=14 Score=29.54 Aligned_cols=30 Identities=23% Similarity=0.670 Sum_probs=25.1
Q ss_pred ccccccccccccceEEecC----CccccchhhhcC
Q psy2747 507 ARLCKICMDKEVGVVLLPC----GHLVTCVLCASS 537 (557)
Q Consensus 507 ~~~C~IC~~~~~~~~~~PC----gH~~~C~~Ca~~ 537 (557)
...|.+|.++--+.-|+-| +|. +|..|+..
T Consensus 15 ~l~CtlC~erLEdtHFVQCPsv~~Hk-FCFpCsr~ 48 (93)
T 2cs3_A 15 PLCCTICHERLEDTHFVQCPSVPSHK-FCFPCSRE 48 (93)
T ss_dssp SCCCSSSCSCCSSTTSEECSSCSSCE-ECHHHHHH
T ss_pred eeEeecchhhhccCceeeCCCccCCe-eeccccHH
Confidence 4689999999999999888 355 89999864
No 107
>1a6b_B Momulv, zinc finger protein NCP10; nucleocapsid protein, intercalation, nucleic acid, retrovirus, viral protein/DNA complex; HET: DNA; NMR {Synthetic} SCOP: g.40.1.1
Probab=24.57 E-value=17 Score=25.12 Aligned_cols=14 Identities=29% Similarity=0.460 Sum_probs=11.2
Q ss_pred cCCCceeeeeecce
Q psy2747 34 GHQHEVQCFACGVK 47 (557)
Q Consensus 34 g~~d~V~Cf~Cg~~ 47 (557)
+..+.++||.||+.
T Consensus 6 ~~~~~~~C~~Cgk~ 19 (40)
T 1a6b_B 6 SQLDRDQCAYCKEK 19 (40)
T ss_dssp CSCCSSSCSSSCCT
T ss_pred CCCCCCeeeECCCC
Confidence 34678999999975
Done!