Query psy2749
Match_columns 217
No_of_seqs 217 out of 1231
Neff 6.6
Searched_HMMs 29240
Date Sat Aug 17 00:13:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2749.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2749hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 99.9 1.9E-24 6.6E-29 217.0 11.2 148 2-182 52-203 (1034)
2 2zxe_A Na, K-ATPase alpha subu 99.9 2.5E-23 8.4E-28 209.0 11.3 148 2-182 47-198 (1028)
3 3ar4_A Sarcoplasmic/endoplasmi 99.9 7.6E-23 2.6E-27 204.7 10.7 146 1-182 2-154 (995)
4 3b8c_A ATPase 2, plasma membra 99.8 4.3E-21 1.5E-25 190.2 -2.6 139 3-182 14-156 (885)
5 1mhs_A Proton pump, plasma mem 99.8 2E-19 6.8E-24 178.8 5.1 125 11-182 76-204 (920)
6 3ixz_A Potassium-transporting 98.6 1.5E-08 5E-13 102.0 3.3 115 101-216 51-182 (1034)
7 2zxe_A Na, K-ATPase alpha subu 98.2 2.7E-07 9.3E-12 92.8 1.1 116 100-216 45-177 (1028)
8 3ar4_A Sarcoplasmic/endoplasmi 97.8 5.1E-06 1.8E-10 83.2 1.6 114 102-216 4-131 (995)
9 1bg5_A MAB, fusion protein of 97.6 2.8E-06 9.5E-11 71.4 -3.3 32 185-216 221-252 (254)
10 3b8c_A ATPase 2, plasma membra 97.0 1.6E-05 5.6E-10 78.9 -5.6 113 101-216 12-135 (885)
11 1mhs_A Proton pump, plasma mem 95.1 0.0048 1.6E-07 61.5 0.9 43 174-216 141-183 (920)
12 1bg5_A MAB, fusion protein of 94.7 0.00099 3.4E-08 55.6 -4.6 34 134-167 221-254 (254)
13 3rfu_A Copper efflux ATPase; a 94.1 0.047 1.6E-06 53.1 5.2 61 122-182 186-252 (736)
14 3j08_A COPA, copper-exporting 92.3 0.024 8.4E-07 54.1 0.0 58 125-182 98-159 (645)
15 3j09_A COPA, copper-exporting 92.1 0.035 1.2E-06 53.7 0.8 60 123-182 173-237 (723)
16 2kij_A Copper-transporting ATP 91.8 0.041 1.4E-06 41.7 0.6 39 144-182 2-50 (124)
17 2hc8_A PACS, cation-transporti 87.7 0.15 5.2E-06 37.9 0.9 33 150-182 2-38 (113)
18 2w84_A Peroxisomal membrane pr 51.0 12 0.00041 25.5 2.9 32 7-42 34-65 (70)
19 1irz_A ARR10-B; helix-turn-hel 36.9 35 0.0012 22.7 3.4 28 6-37 30-57 (64)
20 2wwb_A Protein transport prote 34.7 1.2E+02 0.0041 27.7 7.8 19 21-39 382-400 (476)
21 3rfu_A Copper efflux ATPase; a 25.9 11 0.00039 36.3 -0.7 38 178-215 192-229 (736)
22 1nkz_B Light-harvesting protei 21.6 55 0.0019 19.8 2.1 11 22-32 1-11 (41)
23 3j08_A COPA, copper-exporting 20.6 10 0.00035 35.9 -2.1 39 177-215 99-137 (645)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=99.91 E-value=1.9e-24 Score=217.03 Aligned_cols=148 Identities=43% Similarity=0.686 Sum_probs=129.1
Q ss_pred cccccCHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcc
Q psy2749 2 GLTHAKAKEVLERDGPNALTRGLTHAKAKEVLERDGPNALTPPKQTPEWIKFCKQLFGGFALLLWIGAILCFIAYTIQAS 81 (217)
Q Consensus 2 ~~~~~~~~~l~~~l~~t~~~~GLt~~e~~~r~~~~G~N~l~~~k~~s~~~~~~~~~~d~~~~iL~~~ails~~~~~~~~~ 81 (217)
.+|..+.+|++++|+ |++.+|||++||++|+++||+|++++++++|+|++|++||++||.++|+++|++|++++.+...
T Consensus 52 ~~~~~~~~~~~~~l~-~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~ 130 (1034)
T 3ixz_A 52 NDHQLSVAELEQKYQ-TSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQAS 130 (1034)
T ss_pred chhhCCHHHHHHHhC-CCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhc
Confidence 344469999999999 9988999999999999999999999999999999999999999999999999999988755421
Q ss_pred CCCCCCCCcccccccccccchhhhhhHHHHHHhhhcccCCchhHHHHHHHHHHHHhhcccccccchHHHHHHHhccCCce
Q psy2749 82 TVEEPADDNLTVCDITCCWLFRHAISLVKARAVLNTSKKGKLYLGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQF 161 (217)
Q Consensus 82 ~~~~~~~~n~~~~~~~~~~~~~h~~s~~~~~~~~~t~~~~~~~~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~ 161 (217)
.++.+ ....|+++++|++++++|++++++||+|+++++++|+++.+++
T Consensus 131 ~~~~~--------------------------------~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~ 178 (1034)
T 3ixz_A 131 EGDLT--------------------------------TDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQ 178 (1034)
T ss_pred cCCCc--------------------------------cccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 11110 0124889999999999999999999999999999999999999
Q ss_pred eEEeeecch----hhhhhhhhhhhh
Q psy2749 162 RVTQSHVLI----FDLLWLGIALTF 182 (217)
Q Consensus 162 ~~ViR~g~~----~~~l~lg~iL~~ 182 (217)
++|+|||.. .+++++|||+.+
T Consensus 179 a~ViRdG~~~~I~~~eLv~GDiV~l 203 (1034)
T 3ixz_A 179 ATVIRDGDKFQINADQLVVGDLVEM 203 (1034)
T ss_pred eEEEECCEEEEEEHHHCCCCcEEEE
Confidence 999999986 469999998766
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=99.89 E-value=2.5e-23 Score=208.97 Aligned_cols=148 Identities=59% Similarity=0.975 Sum_probs=128.8
Q ss_pred cccccCHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcc
Q psy2749 2 GLTHAKAKEVLERDGPNALTRGLTHAKAKEVLERDGPNALTPPKQTPEWIKFCKQLFGGFALLLWIGAILCFIAYTIQAS 81 (217)
Q Consensus 2 ~~~~~~~~~l~~~l~~t~~~~GLt~~e~~~r~~~~G~N~l~~~k~~s~~~~~~~~~~d~~~~iL~~~ails~~~~~~~~~ 81 (217)
.++..+.++++++|+ |+..+|||++||++|+++||+|++++++++|+|++|+++|++||+++|++++++|++++.+...
T Consensus 47 ~~~~~~~~~~~~~l~-t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~ 125 (1028)
T 2zxe_A 47 DDHKLSLDELHNKYG-TDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAA 125 (1028)
T ss_dssp CCSSSCHHHHHHHHT-CCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCHHHHHHHhC-cCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcc
Confidence 344459999999999 9988999999999999999999999999999999999999999999999999999998765421
Q ss_pred CCCCCCCCcccccccccccchhhhhhHHHHHHhhhcccCCchhHHHHHHHHHHHHhhcccccccchHHHHHHHhccCCce
Q psy2749 82 TVEEPADDNLTVCDITCCWLFRHAISLVKARAVLNTSKKGKLYLGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQF 161 (217)
Q Consensus 82 ~~~~~~~~n~~~~~~~~~~~~~h~~s~~~~~~~~~t~~~~~~~~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~ 161 (217)
..+++. ..+|+++++|+++++++++++++||+|+++++++|+++.++.
T Consensus 126 ~~~~~~--------------------------------~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~ 173 (1028)
T 2zxe_A 126 TEDEPA--------------------------------NDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQ 173 (1028)
T ss_dssp SSCCCC--------------------------------CHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSE
T ss_pred cccccc--------------------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 111110 124889999999999999999999999999999999999999
Q ss_pred eEEeeecch----hhhhhhhhhhhh
Q psy2749 162 RVTQSHVLI----FDLLWLGIALTF 182 (217)
Q Consensus 162 ~~ViR~g~~----~~~l~lg~iL~~ 182 (217)
++|+|||.. .+++++|||+.+
T Consensus 174 a~V~Rdg~~~~I~~~~Lv~GDiV~l 198 (1028)
T 2zxe_A 174 ALVIRDGEKSTINAEFVVAGDLVEV 198 (1028)
T ss_dssp EEEEETTEEEEEEGGGCCTTCEEEE
T ss_pred eEEEECCEEEEEEHHHCCcCCEEEE
Confidence 999999974 469999999766
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=99.88 E-value=7.6e-23 Score=204.70 Aligned_cols=146 Identities=20% Similarity=0.259 Sum_probs=129.1
Q ss_pred Cccccc-CHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhh
Q psy2749 1 MGLTHA-KAKEVLERDGPNALTRGLTHAKAKEVLERDGPNALTPPKQTPEWIKFCKQLFGGFALLLWIGAILCFIAYTIQ 79 (217)
Q Consensus 1 ~~~~~~-~~~~l~~~l~~t~~~~GLt~~e~~~r~~~~G~N~l~~~k~~s~~~~~~~~~~d~~~~iL~~~ails~~~~~~~ 79 (217)
|..||. +.++++++|+ |+..+|||++|+++|+++||+|++++++++++|+++++||.+|++++|++++++|++++++.
T Consensus 2 ~~~~~~~~~~~~~~~l~-~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~ 80 (995)
T 3ar4_A 2 MEAAHSKSTEECLAYFG-VSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFE 80 (995)
T ss_dssp CTTGGGSCHHHHHHHHT-CCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSC
T ss_pred cchhhhCCHHHHHHHhC-CCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 778886 9999999999 99889999999999999999999999999999999999999999999999999999987543
Q ss_pred ccCCCCCCCCcccccccccccchhhhhhHHHHHHhhhcccCCchhHHHHHHHHHHHHhhcccccccchHHHHHHHhccCC
Q psy2749 80 ASTVEEPADDNLTVCDITCCWLFRHAISLVKARAVLNTSKKGKLYLGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVP 159 (217)
Q Consensus 80 ~~~~~~~~~~n~~~~~~~~~~~~~h~~s~~~~~~~~~t~~~~~~~~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~ 159 (217)
.+. . ....|+++++|++++++++.++++||+|+++++++|+++.+
T Consensus 81 ~~~--~---------------------------------~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~ 125 (995)
T 3ar4_A 81 EGE--E---------------------------------TITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEP 125 (995)
T ss_dssp CSS--G---------------------------------GGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSC
T ss_pred ccc--c---------------------------------chhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 100 0 00248999999999999999999999999999999999999
Q ss_pred ceeEEeeecc--h----hhhhhhhhhhhh
Q psy2749 160 QFRVTQSHVL--I----FDLLWLGIALTF 182 (217)
Q Consensus 160 ~~~~ViR~g~--~----~~~l~lg~iL~~ 182 (217)
+.++|+|+|. . .+++++||++.+
T Consensus 126 ~~a~V~R~g~~~~~~I~~~~lv~GDiV~l 154 (995)
T 3ar4_A 126 EMGKVYRADRKSVQRIKARDIVPGDIVEV 154 (995)
T ss_dssp SEEEEEBTTCSSCEEEEGGGCCTTCEEEE
T ss_pred CeEEEEeCCCceEEEEEHHHCCCCCEEEE
Confidence 9999999875 2 369999998766
No 4
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=99.78 E-value=4.3e-21 Score=190.25 Aligned_cols=139 Identities=14% Similarity=0.188 Sum_probs=121.9
Q ss_pred ccccCHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccC
Q psy2749 3 LTHAKAKEVLERDGPNALTRGLTHAKAKEVLERDGPNALTPPKQTPEWIKFCKQLFGGFALLLWIGAILCFIAYTIQAST 82 (217)
Q Consensus 3 ~~~~~~~~l~~~l~~t~~~~GLt~~e~~~r~~~~G~N~l~~~k~~s~~~~~~~~~~d~~~~iL~~~ails~~~~~~~~~~ 82 (217)
+++.+.+|+++.|+ ++ .+|||++|+++|+++||+|++++++ +++|++|+++|++|+.++|++++++|++++....
T Consensus 14 ~~~~~~~~~~~~l~-~~-~~GLs~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~-- 88 (885)
T 3b8c_A 14 LEKIPIEEVFQQLK-CS-REGLTTQEGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDG-- 88 (885)
T ss_dssp CSSSSTTCCTTTSS-SC-SSCSTHHHHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTT--
T ss_pred hHhCCHHHHHHHhC-CC-CCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence 34459999999999 87 6899999999999999999999877 7889999999999999999999999988753211
Q ss_pred CCCCCCCcccccccccccchhhhhhHHHHHHhhhcccCCchhHHHHHHHHHHHHhhcccccccchHHHHHHHhccCCcee
Q psy2749 83 VEEPADDNLTVCDITCCWLFRHAISLVKARAVLNTSKKGKLYLGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQFR 162 (217)
Q Consensus 83 ~~~~~~~n~~~~~~~~~~~~~h~~s~~~~~~~~~t~~~~~~~~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~~ 162 (217)
...+|.++++|+.++++++.++++||+|+++++++|+++.++.+
T Consensus 89 ------------------------------------~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a 132 (885)
T 3b8c_A 89 ------------------------------------RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKT 132 (885)
T ss_dssp ------------------------------------SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCC
T ss_pred ------------------------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeE
Confidence 01258999999999999999999999999999999999999999
Q ss_pred EEeeecch----hhhhhhhhhhhh
Q psy2749 163 VTQSHVLI----FDLLWLGIALTF 182 (217)
Q Consensus 163 ~ViR~g~~----~~~l~lg~iL~~ 182 (217)
+|+|||.. .+++++||++.+
T Consensus 133 ~V~RdG~~~~I~~~~Lv~GDiV~l 156 (885)
T 3b8c_A 133 KVLRDGKWSEQEAAILVPGDIVSI 156 (885)
T ss_dssp CCCCSSCSCCCCTTTTCTTSBCCC
T ss_pred EEEECCEEEEEEHHHCCCCCEEEE
Confidence 99999975 469999999766
No 5
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=99.76 E-value=2e-19 Score=178.83 Aligned_cols=125 Identities=16% Similarity=0.142 Sum_probs=112.3
Q ss_pred HHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCc
Q psy2749 11 VLERDGPNALTRGLTHAKAKEVLERDGPNALTPPKQTPEWIKFCKQLFGGFALLLWIGAILCFIAYTIQASTVEEPADDN 90 (217)
Q Consensus 11 l~~~l~~t~~~~GLt~~e~~~r~~~~G~N~l~~~k~~s~~~~~~~~~~d~~~~iL~~~ails~~~~~~~~~~~~~~~~~n 90 (217)
+.+.|+ ++..+|||++|+++|+++||+|++++++ +++|..|+++|.+|+.++|+++++++++++
T Consensus 76 ~~~~l~-t~~~~GLs~~ea~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------------- 139 (920)
T 1mhs_A 76 PEDMLQ-TDTRVGLTSEEVVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------------- 139 (920)
T ss_dssp SSTTTT-TCCCCCCCSHHHHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS--------------
T ss_pred HHHHhC-CCcCCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 345688 8878999999999999999999999765 779999999999999999999999987652
Q ss_pred ccccccccccchhhhhhHHHHHHhhhcccCCchhHHHHHHHHHHHHhhcccccccchHHHHHHHhccCCceeEEeeecch
Q psy2749 91 LTVCDITCCWLFRHAISLVKARAVLNTSKKGKLYLGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQFRVTQSHVLI 170 (217)
Q Consensus 91 ~~~~~~~~~~~~~h~~s~~~~~~~~~t~~~~~~~~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~~~ViR~g~~ 170 (217)
+|.++.+|++++++++.++++||+|+++++++|+++.++.++|+|||..
T Consensus 140 -------------------------------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~ 188 (920)
T 1mhs_A 140 -------------------------------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTL 188 (920)
T ss_dssp -------------------------------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSE
T ss_pred -------------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEE
Confidence 4888888899999999999999999999999999999999999999975
Q ss_pred ----hhhhhhhhhhhh
Q psy2749 171 ----FDLLWLGIALTF 182 (217)
Q Consensus 171 ----~~~l~lg~iL~~ 182 (217)
.+++++||++.+
T Consensus 189 ~~I~~~eLv~GDiV~l 204 (920)
T 1mhs_A 189 KEIEAPEVVPGDILQV 204 (920)
T ss_dssp EECCTTTSCTTSEEEE
T ss_pred EEEEHHHcCCCCEEEe
Confidence 469999998765
No 6
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=98.60 E-value=1.5e-08 Score=102.03 Aligned_cols=115 Identities=27% Similarity=0.364 Sum_probs=92.4
Q ss_pred chhhhhhHHHHHHhhhcccCCchhHHHHHHHHHHHHhhcccccccchHHHHHHHhccCCceeEEe--eecch--------
Q psy2749 101 LFRHAISLVKARAVLNTSKKGKLYLGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQFRVTQ--SHVLI-------- 170 (217)
Q Consensus 101 ~~~h~~s~~~~~~~~~t~~~~~~~~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~~~Vi--R~g~~-------- 170 (217)
.+||.+|.+|+.++++|+...|+.+..+ ....-..|.+.+-.+.+...+...++++.++...++ ....+
T Consensus 51 ~~~~~~~~~~~~~~l~~~~~~GLs~~ea-~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~ 129 (1034)
T 3ixz_A 51 INDHQLSVAELEQKYQTSATKGLSASLA-AELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQA 129 (1034)
T ss_pred cchhhCCHHHHHHHhCCCcccCCCHHHH-HHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhh
Confidence 4689999999999999997666888887 778888999988766666666667777766543321 11111
Q ss_pred -------hhhhhhhhhhhhhhhhhchhhhhhhhhHHHHHHHHhhcCCCCCCCC
Q psy2749 171 -------FDLLWLGIALTFVNVITGLFSYYQENKSSRIMESFKNMVPQVSPGR 216 (217)
Q Consensus 171 -------~~~l~lg~iL~~Vv~~~~~~~~~Q~~~ae~~m~~~~~m~p~~~~~~ 216 (217)
.++++.+++|++|+++|++++||||+|++++++++++|.|++++|.
T Consensus 130 ~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~Vi 182 (1034)
T 3ixz_A 130 SEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVI 182 (1034)
T ss_pred ccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEE
Confidence 2367889999999999999999999999999999999999998874
No 7
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=98.19 E-value=2.7e-07 Score=92.80 Aligned_cols=116 Identities=33% Similarity=0.405 Sum_probs=92.9
Q ss_pred cchhhhhhHHHHHHhhhcccCCchhHHHHHHHHHHHHhhcccccccchHHHHHHHhccCCceeEEe--eecch-------
Q psy2749 100 WLFRHAISLVKARAVLNTSKKGKLYLGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQFRVTQ--SHVLI------- 170 (217)
Q Consensus 100 ~~~~h~~s~~~~~~~~~t~~~~~~~~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~~~Vi--R~g~~------- 170 (217)
..+||.+|.+++.++++|+...++.+..+ -...-..|.+.+-.+.+...+...++++.++...++ ....+
T Consensus 45 ~~~~~~~~~~~~~~~l~t~~~~GLs~~e~-~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~ 123 (1028)
T 2zxe_A 45 SMDDHKLSLDELHNKYGTDLTRGLTNARA-KEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQ 123 (1028)
T ss_dssp CCCCSSSCHHHHHHHHTCCSSSCBCHHHH-HHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhCCHHHHHHHhCcCccCCCCHHHH-HHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 45789999999999999986556887776 778888999988766566666677888877765432 11111
Q ss_pred --------hhhhhhhhhhhhhhhhhchhhhhhhhhHHHHHHHHhhcCCCCCCCC
Q psy2749 171 --------FDLLWLGIALTFVNVITGLFSYYQENKSSRIMESFKNMVPQVSPGR 216 (217)
Q Consensus 171 --------~~~l~lg~iL~~Vv~~~~~~~~~Q~~~ae~~m~~~~~m~p~~~~~~ 216 (217)
.++.+.+++|++|+++|++++|+|++|++++++++++|.|++++|.
T Consensus 124 ~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~ 177 (1028)
T 2zxe_A 124 AATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVI 177 (1028)
T ss_dssp HHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEE
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE
Confidence 1478899999999999999999999999999999999999988763
No 8
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=97.79 E-value=5.1e-06 Score=83.20 Aligned_cols=114 Identities=12% Similarity=0.076 Sum_probs=85.3
Q ss_pred hhhhhhHHHHHHhhhcccCCchhHHHHHHHHHHHHhhcccccccchHHHHHHHhccCCceeEEe--eecch---------
Q psy2749 102 FRHAISLVKARAVLNTSKKGKLYLGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQFRVTQ--SHVLI--------- 170 (217)
Q Consensus 102 ~~h~~s~~~~~~~~~t~~~~~~~~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~~~Vi--R~g~~--------- 170 (217)
.||.+|.++++++++|+...++.+..+ -...-..+.+..-.+.+..-....++++.++...++ ....+
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~-~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~ 82 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQV-KRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 82 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHH-HHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHH-HHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 579999999999999987656888777 677778888888665554555556667665543221 11111
Q ss_pred ---hhhhhhhhhhhhhhhhhchhhhhhhhhHHHHHHHHhhcCCCCCCCC
Q psy2749 171 ---FDLLWLGIALTFVNVITGLFSYYQENKSSRIMESFKNMVPQVSPGR 216 (217)
Q Consensus 171 ---~~~l~lg~iL~~Vv~~~~~~~~~Q~~~ae~~m~~~~~m~p~~~~~~ 216 (217)
....+.+.++++++++|+++++|||+|++++++++++|.|.+++|.
T Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~ 131 (995)
T 3ar4_A 83 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVY 131 (995)
T ss_dssp SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEE
T ss_pred ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEE
Confidence 1144567788889999999999999999999999999999988763
No 9
>1bg5_A MAB, fusion protein of alpha-Na,K-ATPase with glutathione S-transferase; ankyrin binding, carrier crystallization, ION transport; 2.60A {Rattus norvegicus} SCOP: a.45.1.1 c.47.1.5
Probab=97.59 E-value=2.8e-06 Score=71.39 Aligned_cols=32 Identities=59% Similarity=0.743 Sum_probs=30.8
Q ss_pred hhhchhhhhhhhhHHHHHHHHhhcCCCCCCCC
Q psy2749 185 VITGLFSYYQENKSSRIMESFKNMVPQVSPGR 216 (217)
Q Consensus 185 ~~~~~~~~~Q~~~ae~~m~~~~~m~p~~~~~~ 216 (217)
++++.|+||||+|++++|+||++|+|++|.|.
T Consensus 221 ~i~~~~~~~q~~~~~~~~~~~~~~~p~~~~v~ 252 (254)
T 1bg5_A 221 LVPRGSSYYQEAKSSKIMESFKNMVPQQALVN 252 (254)
T ss_dssp CCSCCCTTTTCSSSCSCCSSSCCCCCCCCCCS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhhCCCceEEe
Confidence 68999999999999999999999999999986
No 10
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=97.02 E-value=1.6e-05 Score=78.91 Aligned_cols=113 Identities=11% Similarity=0.034 Sum_probs=80.4
Q ss_pred chhhhhhHHHHHHhhhcccCCchhHHHHHHHHHHHHhhcccccccchHHHHHHHhccCCceeEEe--eecch--------
Q psy2749 101 LFRHAISLVKARAVLNTSKKGKLYLGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQFRVTQ--SHVLI-------- 170 (217)
Q Consensus 101 ~~~h~~s~~~~~~~~~t~~~~~~~~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~~~Vi--R~g~~-------- 170 (217)
.++|.+|.+|+.+++.++.. ++.+..+ -...-..+.+..-.+ +...+...++++.++...++ ....+
T Consensus 12 ~~~~~~~~~~~~~~l~~~~~-GLs~~e~-~~r~~~~G~N~l~~~-~~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~ 88 (885)
T 3b8c_A 12 VDLEKIPIEEVFQQLKCSRE-GLTTQEG-EDRIQIFGPNKLEEK-KESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDG 88 (885)
T ss_dssp CCCSSSSTTCCTTTSSSCSS-CSTHHHH-HHHSSSCCSCCTTTT-CCCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTT
T ss_pred hhhHhCCHHHHHHHhCCCCC-CCCHHHH-HHHHHhcCCCccCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 36789999999999998754 5887766 666767777776433 33333444556655554331 11111
Q ss_pred -hhhhhhhhhhhhhhhhhchhhhhhhhhHHHHHHHHhhcCCCCCCCC
Q psy2749 171 -FDLLWLGIALTFVNVITGLFSYYQENKSSRIMESFKNMVPQVSPGR 216 (217)
Q Consensus 171 -~~~l~lg~iL~~Vv~~~~~~~~~Q~~~ae~~m~~~~~m~p~~~~~~ 216 (217)
..+.+.+.+|++++++|++++|+|++|+++++++++++.|++++|.
T Consensus 89 ~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~ 135 (885)
T 3b8c_A 89 RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVL 135 (885)
T ss_dssp SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCC
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 1134556677888999999999999999999999999999999874
No 11
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=95.14 E-value=0.0048 Score=61.54 Aligned_cols=43 Identities=9% Similarity=0.029 Sum_probs=37.8
Q ss_pred hhhhhhhhhhhhhhchhhhhhhhhHHHHHHHHhhcCCCCCCCC
Q psy2749 174 LWLGIALTFVNVITGLFSYYQENKSSRIMESFKNMVPQVSPGR 216 (217)
Q Consensus 174 l~lg~iL~~Vv~~~~~~~~~Q~~~ae~~m~~~~~m~p~~~~~~ 216 (217)
.+.+.+|++++++|++++|+|+++++++++++++|.|.+++|.
T Consensus 141 ~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~ 183 (920)
T 1mhs_A 141 WVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVL 183 (920)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEE
Confidence 3445677888999999999999999999999999999998763
No 12
>1bg5_A MAB, fusion protein of alpha-Na,K-ATPase with glutathione S-transferase; ankyrin binding, carrier crystallization, ION transport; 2.60A {Rattus norvegicus} SCOP: a.45.1.1 c.47.1.5
Probab=94.71 E-value=0.00099 Score=55.60 Aligned_cols=34 Identities=56% Similarity=0.739 Sum_probs=32.2
Q ss_pred HHHhhcccccccchHHHHHHHhccCCceeEEeee
Q psy2749 134 IVTGIFSYYQESKSSAIMDSFKNLVPQFRVTQSH 167 (217)
Q Consensus 134 ~i~~~i~~~qe~ka~k~~~~L~~~~~~~~~ViR~ 167 (217)
++++.++|+||+++++.+++|++|++++|+|+|.
T Consensus 221 ~i~~~~~~~q~~~~~~~~~~~~~~~p~~~~v~~~ 254 (254)
T 1bg5_A 221 LVPRGSSYYQEAKSSKIMESFKNMVPQQALVNSS 254 (254)
T ss_dssp CCSCCCTTTTCSSSCSCCSSSCCCCCCCCCCSCC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhhCCCceEEecC
Confidence 4789999999999999999999999999999985
No 13
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=94.15 E-value=0.047 Score=53.11 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=51.0
Q ss_pred chhHHH-HHHHHHHHHhhcccccccchHHHHHHHhccCCceeEEee-ecch----hhhhhhhhhhhh
Q psy2749 122 KLYLGI-VLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQFRVTQS-HVLI----FDLLWLGIALTF 182 (217)
Q Consensus 122 ~~~~~i-~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~~~ViR-~g~~----~~~l~lg~iL~~ 182 (217)
.|.++. +|+..+.+.-.+..++++|+.+.+++|.++.+..++|+| ||.. .+++++||++.+
T Consensus 186 ~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v 252 (736)
T 3rfu_A 186 VYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRV 252 (736)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEE
Confidence 477766 555777888889999999999999999999999999987 8864 469999998765
No 14
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=92.35 E-value=0.024 Score=54.13 Aligned_cols=58 Identities=10% Similarity=0.119 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhhcccccccchHHHHHHHhccCCceeEEeeecch----hhhhhhhhhhhh
Q psy2749 125 LGIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQFRVTQSHVLI----FDLLWLGIALTF 182 (217)
Q Consensus 125 ~~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~~~ViR~g~~----~~~l~lg~iL~~ 182 (217)
.+.+++.++.+.-.+..++++|+.+.+++|.++.+..++|+|+|.. .+++++||++..
T Consensus 98 ~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v 159 (645)
T 3j08_A 98 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIV 159 (645)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEE
Confidence 3555566677777888888889999999999999999999999975 469999998765
No 15
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=92.11 E-value=0.035 Score=53.68 Aligned_cols=60 Identities=12% Similarity=0.161 Sum_probs=48.5
Q ss_pred hhH-HHHHHHHHHHHhhcccccccchHHHHHHHhccCCceeEEeeecch----hhhhhhhhhhhh
Q psy2749 123 LYL-GIVLTAVVIVTGIFSYYQESKSSAIMDSFKNLVPQFRVTQSHVLI----FDLLWLGIALTF 182 (217)
Q Consensus 123 ~~~-~i~I~~vv~i~~~i~~~qe~ka~k~~~~L~~~~~~~~~ViR~g~~----~~~l~lg~iL~~ 182 (217)
|++ +.+++.++.+.-.+..++++|+.+.+++|.++.+..++|+|+|.. .+++++||++.+
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v 237 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIV 237 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEE
Confidence 444 455566666777788888888899999999999999999999975 469999998765
No 16
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=91.75 E-value=0.041 Score=41.73 Aligned_cols=39 Identities=10% Similarity=-0.026 Sum_probs=29.5
Q ss_pred ccchHHHHHHHhccCCceeEEeeecch----------hhhhhhhhhhhh
Q psy2749 144 ESKSSAIMDSFKNLVPQFRVTQSHVLI----------FDLLWLGIALTF 182 (217)
Q Consensus 144 e~ka~k~~~~L~~~~~~~~~ViR~g~~----------~~~l~lg~iL~~ 182 (217)
++|+.+++++|.++.+..++|+|+|.. .+++++||++.+
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v 50 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKV 50 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEEC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEE
Confidence 578899999999999999999997641 348999998765
No 17
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=87.68 E-value=0.15 Score=37.89 Aligned_cols=33 Identities=9% Similarity=0.017 Sum_probs=28.1
Q ss_pred HHHHHhccCCceeEEeeecch----hhhhhhhhhhhh
Q psy2749 150 IMDSFKNLVPQFRVTQSHVLI----FDLLWLGIALTF 182 (217)
Q Consensus 150 ~~~~L~~~~~~~~~ViR~g~~----~~~l~lg~iL~~ 182 (217)
++++|.++.+..++|+|+|.. .+++++||++.+
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v 38 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIV 38 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEE
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEE
Confidence 578899999999999999964 469999998765
No 18
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=50.95 E-value=12 Score=25.53 Aligned_cols=32 Identities=16% Similarity=0.116 Sum_probs=22.9
Q ss_pred CHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCC
Q psy2749 7 KAKEVLERDGPNALTRGLTHAKAKEVLERDGPNALT 42 (217)
Q Consensus 7 ~~~~l~~~l~~t~~~~GLt~~e~~~r~~~~G~N~l~ 42 (217)
+.+.=.+-|. .+|||.+|+++-+++-|.+.-.
T Consensus 34 p~~~K~~FL~----sKGLt~eEI~~Al~ra~~~~~~ 65 (70)
T 2w84_A 34 PLATRRAFLK----KKGLTDEEIDMAFQQSGTAADE 65 (70)
T ss_dssp CHHHHHHHHH----HTTCCHHHHHHHHHHHTCCCCC
T ss_pred CHHHHHHHHH----HcCCCHHHHHHHHHHccCCCCC
Confidence 3444444555 4899999999999998876544
No 19
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=36.85 E-value=35 Score=22.69 Aligned_cols=28 Identities=21% Similarity=0.186 Sum_probs=22.6
Q ss_pred cCHHHHHHHcCCCCCCCCCCHHHHHHHHHhcC
Q psy2749 6 AKAKEVLERDGPNALTRGLTHAKAKEVLERDG 37 (217)
Q Consensus 6 ~~~~~l~~~l~~t~~~~GLt~~e~~~r~~~~G 37 (217)
+++..+++.++ + .|||.++++..+++|-
T Consensus 30 AtPk~Il~~M~-v---~gLT~~~VkSHLQKYR 57 (64)
T 1irz_A 30 AVPKKILDLMN-V---DKLTRENVASHLQKFR 57 (64)
T ss_dssp CCHHHHHHHHC-C---TTCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHcC-C---CCCCHHHHHHHHHHHH
Confidence 45677777777 3 5999999999999883
No 20
>2wwb_A Protein transport protein SEC61 subunit alpha ISO; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=34.73 E-value=1.2e+02 Score=27.72 Aligned_cols=19 Identities=11% Similarity=0.097 Sum_probs=16.2
Q ss_pred CCCCCHHHHHHHHHhcCCC
Q psy2749 21 TRGLTHAKAKEVLERDGPN 39 (217)
Q Consensus 21 ~~GLt~~e~~~r~~~~G~N 39 (217)
-.|.+++|+++.+++.|-=
T Consensus 382 i~g~np~dvA~~Lkk~G~~ 400 (476)
T 2wwb_A 382 VSGSSAKDVAKQLKEQQMV 400 (476)
T ss_dssp TSSCCHHHHHHHHHHHCTT
T ss_pred HhCCCHHHHHHHHHHcCCc
Confidence 3589999999999999954
No 21
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=25.93 E-value=11 Score=36.31 Aligned_cols=38 Identities=8% Similarity=0.248 Sum_probs=33.3
Q ss_pred hhhhhhhhhhchhhhhhhhhHHHHHHHHhhcCCCCCCC
Q psy2749 178 IALTFVNVITGLFSYYQENKSSRIMESFKNMVPQVSPG 215 (217)
Q Consensus 178 ~iL~~Vv~~~~~~~~~Q~~~ae~~m~~~~~m~p~~~~~ 215 (217)
.+|++++++...+..++.+|+++.++++.++.|+.+.+
T Consensus 192 ~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~v 229 (736)
T 3rfu_A 192 AVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHR 229 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 35667888899999999999999999999999998753
No 22
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=21.58 E-value=55 Score=19.83 Aligned_cols=11 Identities=27% Similarity=0.401 Sum_probs=8.6
Q ss_pred CCCCHHHHHHH
Q psy2749 22 RGLTHAKAKEV 32 (217)
Q Consensus 22 ~GLt~~e~~~r 32 (217)
.|||++|+++-
T Consensus 1 ~gLT~~EA~Ef 11 (41)
T 1nkz_B 1 ATLTAEQSEEL 11 (41)
T ss_dssp CCCCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 48999988773
No 23
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=20.64 E-value=10 Score=35.87 Aligned_cols=39 Identities=3% Similarity=0.078 Sum_probs=32.1
Q ss_pred hhhhhhhhhhhchhhhhhhhhHHHHHHHHhhcCCCCCCC
Q psy2749 177 GIALTFVNVITGLFSYYQENKSSRIMESFKNMVPQVSPG 215 (217)
Q Consensus 177 g~iL~~Vv~~~~~~~~~Q~~~ae~~m~~~~~m~p~~~~~ 215 (217)
+.++++++++...+..++.+|+++.+++++++.|+.+.|
T Consensus 99 ~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v 137 (645)
T 3j08_A 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVV 137 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 345666677788888888889999999999999998765
Done!