RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2754
         (367 letters)



>d1ef1a2 b.55.1.5 (A:199-297) Moesin {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 99

 Score = 28.7 bits (64), Expect = 0.32
 Identities = 12/73 (16%), Positives = 21/73 (28%), Gaps = 9/73 (12%)

Query: 94  GITELYYNLK-HPKESFHNTSITLDCDQCTMVTHHGKPMLTKVCTEGRLILEFTFDDLMR 152
           G+     N +  PK  F  + I         ++ + K  + K   +      F    L  
Sbjct: 26  GLNIYEQNDRLTPKIGFPWSEIR-------NISFNDKKFVIKPIDKKAPDFVFYAPRLRI 78

Query: 153 IKS-WHFAVRQHR 164
            K      +  H 
Sbjct: 79  NKRILALCMGNHE 91


>d1q25a3 b.64.1.1 (A:281-432) Cation-independent mannose-6-phosphate
           receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}
          Length = 152

 Score = 28.7 bits (63), Expect = 0.69
 Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 3/68 (4%)

Query: 67  FCLEDGPKRYTIGRTLIPRYFRSIFDGGITELYYN-LKHPKESFHNTSITLDCDQCTMVT 125
               D  +    GR           DG +T +Y+   +        + I  +C+Q     
Sbjct: 69  VKKADSTQVKVAGRPQNLTLR--YSDGDLTLIYFGGEECSSGFQRMSVINFECNQTAGNN 126

Query: 126 HHGKPMLT 133
             G P+ T
Sbjct: 127 GRGAPVFT 134


>d2yvxa2 d.37.1.1 (A:132-275) Magnesium transporter MgtE {Thermus
           thermophilus [TaxId: 274]}
          Length = 144

 Score = 27.9 bits (61), Expect = 1.1
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 87  FRSIFDGGITELYYNLKHPKESFHNTSITLDCDQCTMVTHHGKPMLTKVCTEGRLILEFT 146
            R +           + +PK  +  T    +     M   +   +L  V  EGRL+   T
Sbjct: 55  LRDLIVADPRTRVAEIMNPKVVYVRTDTDQEEVARLM-ADYDFTVLPVVDEEGRLVGIVT 113

Query: 147 FDDLMRI 153
            DD++ +
Sbjct: 114 VDDVLDV 120


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.135    0.423 

Gapped
Lambda     K      H
   0.267   0.0484    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,401,243
Number of extensions: 64715
Number of successful extensions: 139
Number of sequences better than 10.0: 1
Number of HSP's gapped: 139
Number of HSP's successfully gapped: 3
Length of query: 367
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 280
Effective length of database: 1,213,086
Effective search space: 339664080
Effective search space used: 339664080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.8 bits)