BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2757
(61 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91077994|ref|XP_969024.1| PREDICTED: similar to lim domain binding protein [Tribolium
castaneum]
Length = 575
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/32 (84%), Positives = 29/32 (90%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPYFGQPDYR+YELNKRLQQRTE +LW
Sbjct: 212 RRHTPYFGQPDYRIYELNKRLQQRTEESDNLW 243
>gi|270001422|gb|EEZ97869.1| hypothetical protein TcasGA2_TC000244 [Tribolium castaneum]
Length = 708
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPYFGQPDYR+YELNKRLQQRTE +LW
Sbjct: 348 RRHTPYFGQPDYRIYELNKRLQQRTEESDNLW 379
>gi|328776943|ref|XP_394712.4| PREDICTED: hypothetical protein LOC411238 [Apis mellifera]
Length = 822
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPYFGQPDYR+YELNKRLQQRTE +LW
Sbjct: 293 RRHTPYFGQPDYRLYELNKRLQQRTEESDNLW 324
>gi|340717783|ref|XP_003397355.1| PREDICTED: LIM domain-binding protein 2-like [Bombus terrestris]
Length = 617
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPYFGQPDYR+YELNKRLQQRTE +LW
Sbjct: 232 RRHTPYFGQPDYRLYELNKRLQQRTEESDNLW 263
>gi|242014824|ref|XP_002428085.1| LIM domain-binding protein, putative [Pediculus humanus corporis]
gi|212512604|gb|EEB15347.1| LIM domain-binding protein, putative [Pediculus humanus corporis]
Length = 382
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPYFGQPDYR+YELNKRLQQRTE +LW
Sbjct: 25 RRHTPYFGQPDYRIYELNKRLQQRTEESDNLW 56
>gi|383856253|ref|XP_003703624.1| PREDICTED: uncharacterized protein LOC100880826 [Megachile
rotundata]
Length = 697
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPYFGQPDYR+YELNKRLQQRTE +LW
Sbjct: 169 RRHTPYFGQPDYRLYELNKRLQQRTEESDNLW 200
>gi|380028812|ref|XP_003698080.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain-binding protein 2-like,
partial [Apis florea]
Length = 601
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPYFGQPDYR+YELNKRLQQRTE +LW
Sbjct: 75 RRHTPYFGQPDYRLYELNKRLQQRTEESDNLW 106
>gi|427792649|gb|JAA61776.1| Putative lim domain binding protein ldb1/nli/clim, partial
[Rhipicephalus pulchellus]
Length = 449
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPYFGQPDYR+YE+NKRLQQRTE +LW
Sbjct: 41 RRHTPYFGQPDYRIYEMNKRLQQRTEESDNLW 72
>gi|241709461|ref|XP_002403406.1| Lim domain-binding protein, putative [Ixodes scapularis]
gi|215505066|gb|EEC14560.1| Lim domain-binding protein, putative [Ixodes scapularis]
Length = 405
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPYFGQPDYR+YE+NKRLQQRTE +LW
Sbjct: 50 RRHTPYFGQPDYRIYEMNKRLQQRTEESDNLW 81
>gi|357614323|gb|EHJ69020.1| hypothetical protein KGM_07291 [Danaus plexippus]
Length = 367
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 28/33 (84%), Gaps = 3/33 (9%)
Query: 4 VRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH PYFGQPDYRVYELNKRLQQRTE +LW
Sbjct: 49 FRRHAPYFGQPDYRVYELNKRLQQRTEDSDNLW 81
>gi|443726786|gb|ELU13845.1| hypothetical protein CAPTEDRAFT_222123 [Capitella teleta]
Length = 362
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY GQPDYR+YELNKRLQQR+E +LW
Sbjct: 17 RRHTPYMGQPDYRIYELNKRLQQRSEESDNLW 48
>gi|405965806|gb|EKC31160.1| LIM domain-binding protein 2 [Crassostrea gigas]
Length = 372
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G RHTPY GQPDYR++ELNKRLQQR+E +LW
Sbjct: 7 GGMRHTPYMGQPDYRIHELNKRLQQRSEESDNLW 40
>gi|158298072|ref|XP_318175.4| AGAP004691-PA [Anopheles gambiae str. PEST]
gi|157014632|gb|EAA13295.5| AGAP004691-PA [Anopheles gambiae str. PEST]
Length = 618
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/26 (88%), Positives = 24/26 (92%), Gaps = 1/26 (3%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE 30
RRH YFGQPDYR+YELNKRLQQRTE
Sbjct: 243 RRHA-YFGQPDYRIYELNKRLQQRTE 267
>gi|390367269|ref|XP_782747.2| PREDICTED: LIM domain-binding protein 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 393
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%), Gaps = 3/33 (9%)
Query: 4 VRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
V RHTP+ QPDYR+Y+LNKRLQQRTE +LW
Sbjct: 18 VPRHTPFISQPDYRIYDLNKRLQQRTEESDNLW 50
>gi|390367267|ref|XP_003731215.1| PREDICTED: LIM domain-binding protein 2-like isoform 1
[Strongylocentrotus purpuratus]
Length = 419
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%), Gaps = 3/33 (9%)
Query: 4 VRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
V RHTP+ QPDYR+Y+LNKRLQQRTE +LW
Sbjct: 18 VPRHTPFISQPDYRIYDLNKRLQQRTEESDNLW 50
>gi|157128172|ref|XP_001661340.1| lim domain binding protein [Aedes aegypti]
gi|108872666|gb|EAT36891.1| AAEL011058-PA, partial [Aedes aegypti]
Length = 576
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 24/26 (92%), Gaps = 1/26 (3%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE 30
RRH YFGQPDYR+YELNKRLQQRTE
Sbjct: 206 RRHA-YFGQPDYRIYELNKRLQQRTE 230
>gi|157134433|ref|XP_001663300.1| lim domain binding protein [Aedes aegypti]
gi|108870464|gb|EAT34689.1| AAEL013094-PA, partial [Aedes aegypti]
Length = 576
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 24/26 (92%), Gaps = 1/26 (3%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE 30
RRH YFGQPDYR+YELNKRLQQRTE
Sbjct: 206 RRHA-YFGQPDYRIYELNKRLQQRTE 230
>gi|335293255|ref|XP_003356915.1| PREDICTED: LIM domain-binding protein 2-like [Sus scrofa]
Length = 68
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTESLWSSSPETK 40
RRHTPY QP+YRVYE+NKRLQ RTE + SP +
Sbjct: 19 RRHTPYMVQPEYRVYEMNKRLQSRTEPKAAVSPPSN 54
>gi|291224136|ref|XP_002732065.1| PREDICTED: LIM homeobox protein cofactor [Saccoglossus
kowalevskii]
Length = 426
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%), Gaps = 5/33 (15%)
Query: 6 RHTPYFGQPDYRVYELNKRLQQRTE-----SLW 33
RHTP+ QPDYR+YELNKRLQQRTE +LW
Sbjct: 35 RHTPFVSQPDYRIYELNKRLQQRTEVQESDNLW 67
>gi|351700766|gb|EHB03685.1| LIM domain-binding protein 2 [Heterocephalus glaber]
Length = 464
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTESLW 33
RRHTPY QP+YR+YE+NKRLQ RTE L+
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEKLF 47
>gi|321477045|gb|EFX88004.1| hypothetical protein DAPPUDRAFT_42148 [Daphnia pulex]
Length = 430
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%), Gaps = 4/33 (12%)
Query: 5 RRH-TPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH PYF QPDYR+YELNKRLQQRTE +LW
Sbjct: 20 RRHPGPYFNQPDYRIYELNKRLQQRTEESDNLW 52
>gi|156338691|ref|XP_001620010.1| hypothetical protein NEMVEDRAFT_v1g149517 [Nematostella
vectensis]
gi|156204224|gb|EDO27910.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDE 43
RRHTPY+ PD R+YELN+RLQQRTE +LW S T+ E
Sbjct: 7 RRHTPYYTHPDVRIYELNRRLQQRTEESDNLWWDSFVTEFFE 48
>gi|283464029|gb|ADB22598.1| LIM homeobox protein cofactor [Saccoglossus kowalevskii]
Length = 285
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 6 RHTPYFGQPDYRVYELNKRLQQRTE 30
RHTP+ QPDYR+YELNKRLQQRTE
Sbjct: 35 RHTPFVSQPDYRIYELNKRLQQRTE 59
>gi|156385355|ref|XP_001633596.1| predicted protein [Nematostella vectensis]
gi|156220668|gb|EDO41533.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY+ PD R+YELN+RLQQRTE +LW
Sbjct: 7 RRHTPYYTHPDVRIYELNRRLQQRTEESDNLW 38
>gi|444705566|gb|ELW46979.1| LIM domain-binding protein 2 [Tupaia chinensis]
Length = 361
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|426232065|ref|XP_004010056.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Ovis aries]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|224050077|ref|XP_002193978.1| PREDICTED: LIM domain-binding protein 2 [Taeniopygia guttata]
Length = 371
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|116642898|ref|NP_034828.3| LIM domain-binding protein 2 isoform 1 [Mus musculus]
gi|158515399|sp|O55203.2|LDB2_MOUSE RecName: Full=LIM domain-binding protein 2; Short=LDB-2; AltName:
Full=Carboxyl-terminal LIM domain-binding protein 1;
Short=CLIM-1; AltName: Full=LIM domain-binding factor
CLIM1
gi|50925359|gb|AAH79611.1| LIM domain binding 2 [Mus musculus]
gi|148705665|gb|EDL37612.1| LIM domain binding 2 [Mus musculus]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|126331870|ref|XP_001363147.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Monodelphis
domestica]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|449273513|gb|EMC83007.1| LIM domain-binding protein 2 [Columba livia]
Length = 371
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|301761760|ref|XP_002916295.1| PREDICTED: LIM domain-binding protein 2-like isoform 1
[Ailuropoda melanoleuca]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|157822259|ref|NP_001099479.1| LIM domain-binding protein 2 [Rattus norvegicus]
gi|149047267|gb|EDL99936.1| LIM domain binding 2 (predicted) [Rattus norvegicus]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|197246018|gb|AAI68881.1| Ldb2 protein [Rattus norvegicus]
Length = 371
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|410303886|gb|JAA30543.1| LIM domain binding 2 [Pan troglodytes]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|296196838|ref|XP_002746005.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Callithrix
jacchus]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|344279098|ref|XP_003411328.1| PREDICTED: LIM domain-binding protein 2 [Loxodonta africana]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|164420735|ref|NP_001040076.2| LIM domain binding 2 [Bos taurus]
gi|296486278|tpg|DAA28391.1| TPA: LIM domain binding 2 [Bos taurus]
Length = 370
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|338723732|ref|XP_001500416.2| PREDICTED: LIM domain-binding protein 2 isoform 2 [Equus
caballus]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|149410652|ref|XP_001505683.1| PREDICTED: LIM domain-binding protein 2 isoform 1
[Ornithorhynchus anatinus]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|114593280|ref|XP_001161726.1| PREDICTED: LIM domain-binding protein 2 isoform 2 [Pan
troglodytes]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|86820695|gb|AAI05322.1| LIM domain binding 2 [Bos taurus]
Length = 324
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|4504971|ref|NP_001281.1| LIM domain-binding protein 2 isoform a [Homo sapiens]
gi|388454025|ref|NP_001252815.1| LIM domain-binding protein 2 [Macaca mulatta]
gi|297673209|ref|XP_002814665.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Pongo abelii]
gi|332218827|ref|XP_003258560.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|397513080|ref|XP_003826854.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Pan paniscus]
gi|403271166|ref|XP_003927508.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|68565371|sp|O43679.1|LDB2_HUMAN RecName: Full=LIM domain-binding protein 2; Short=LDB-2; AltName:
Full=Carboxyl-terminal LIM domain-binding protein 1;
Short=CLIM-1; AltName: Full=LIM domain-binding factor
CLIM1
gi|2896172|gb|AAC83552.1| LIM homeobox protein cofactor [Homo sapiens]
gi|3372810|gb|AAC28342.1| LIM homeobox protein cofactor [Homo sapiens]
gi|3746646|gb|AAC77817.1| LIM-domain binding factor CLIM1 [Homo sapiens]
gi|21706450|gb|AAH34019.1| LIM domain binding 2 [Homo sapiens]
gi|67970922|dbj|BAE01803.1| unnamed protein product [Macaca fascicularis]
gi|119613173|gb|EAW92767.1| LIM domain binding 2, isoform CRA_c [Homo sapiens]
gi|123982183|gb|ABM82907.1| LIM domain binding 2 [synthetic construct]
gi|123996991|gb|ABM86097.1| LIM domain binding 2 [synthetic construct]
gi|355687184|gb|EHH25768.1| LIM domain-binding protein 2 [Macaca mulatta]
gi|355749182|gb|EHH53581.1| LIM domain-binding protein 2 [Macaca fascicularis]
gi|380785027|gb|AFE64389.1| LIM domain-binding protein 2 isoform a [Macaca mulatta]
gi|410217800|gb|JAA06119.1| LIM domain binding 2 [Pan troglodytes]
gi|410253182|gb|JAA14558.1| LIM domain binding 2 [Pan troglodytes]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|2738114|gb|AAB96884.1| LIM homeobox protein cofactor CLIM-1a [Mus musculus]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|119613172|gb|EAW92766.1| LIM domain binding 2, isoform CRA_b [Homo sapiens]
gi|380817786|gb|AFE80767.1| LIM domain-binding protein 2 isoform a [Macaca mulatta]
Length = 371
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|348558553|ref|XP_003465082.1| PREDICTED: LIM domain-binding protein 2-like isoform 1 [Cavia
porcellus]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|291385569|ref|XP_002709579.1| PREDICTED: LIM domain binding 2, partial [Oryctolagus cuniculus]
Length = 359
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 5 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 36
>gi|410957937|ref|XP_003985580.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Felis catus]
Length = 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQARTEDSDNLW 50
>gi|426232067|ref|XP_004010057.1| PREDICTED: LIM domain-binding protein 2 isoform 2 [Ovis aries]
Length = 331
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|345306406|ref|XP_001505760.2| PREDICTED: LIM domain-binding protein 2 isoform 2
[Ornithorhynchus anatinus]
Length = 331
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|345306408|ref|XP_003428463.1| PREDICTED: LIM domain-binding protein 2 [Ornithorhynchus
anatinus]
Length = 298
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|208966666|dbj|BAG73347.1| LIM domain binding 2 [synthetic construct]
Length = 345
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|410957941|ref|XP_003985582.1| PREDICTED: LIM domain-binding protein 2 isoform 3 [Felis catus]
Length = 313
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQARTEDSDNLW 50
>gi|390460999|ref|XP_003732575.1| PREDICTED: LIM domain-binding protein 2 [Callithrix jacchus]
Length = 331
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|116642891|ref|NP_001070866.1| LIM domain-binding protein 2 isoform 2 [Mus musculus]
gi|74147160|dbj|BAE27488.1| unnamed protein product [Mus musculus]
gi|74151210|dbj|BAE27725.1| unnamed protein product [Mus musculus]
Length = 329
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|345489287|ref|XP_001599552.2| PREDICTED: LIM domain-binding protein 2-like isoform 1 [Nasonia
vitripennis]
Length = 669
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RR PY+ QPDYR YELNKRLQQRTE +LW
Sbjct: 282 RRQPPYYQQPDYRFYELNKRLQQRTEESDNLW 313
>gi|301761762|ref|XP_002916296.1| PREDICTED: LIM domain-binding protein 2-like isoform 2
[Ailuropoda melanoleuca]
Length = 331
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|195546926|ref|NP_001124306.1| LIM domain-binding protein 2 isoform b [Homo sapiens]
gi|332218829|ref|XP_003258561.1| PREDICTED: LIM domain-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|395734798|ref|XP_003776479.1| PREDICTED: LIM domain-binding protein 2 [Pongo abelii]
gi|397513082|ref|XP_003826855.1| PREDICTED: LIM domain-binding protein 2 isoform 2 [Pan paniscus]
gi|403271168|ref|XP_003927509.1| PREDICTED: LIM domain-binding protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
gi|3372813|gb|AAC28343.1| LIM homeobox protein cofactor [Homo sapiens]
gi|119613171|gb|EAW92765.1| LIM domain binding 2, isoform CRA_a [Homo sapiens]
gi|410217802|gb|JAA06120.1| LIM domain binding 2 [Pan troglodytes]
gi|410253184|gb|JAA14559.1| LIM domain binding 2 [Pan troglodytes]
gi|410303888|gb|JAA30544.1| LIM domain binding 2 [Pan troglodytes]
gi|410339083|gb|JAA38488.1| LIM domain binding 2 [Pan troglodytes]
Length = 331
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|332819113|ref|XP_003310299.1| PREDICTED: LIM domain-binding protein 2 [Pan troglodytes]
Length = 331
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|348511723|ref|XP_003443393.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Oreochromis
niloticus]
Length = 368
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH+PY QP+YR+YE+NKRLQ RTE SLW
Sbjct: 19 RRHSPYMVQPEYRIYEMNKRLQARTEESDSLW 50
>gi|338723734|ref|XP_003364784.1| PREDICTED: LIM domain-binding protein 2 [Equus caballus]
gi|345798407|ref|XP_536231.3| PREDICTED: LIM domain-binding protein 2 isoform 2 [Canis lupus
familiaris]
Length = 331
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|348511725|ref|XP_003443394.1| PREDICTED: LIM domain-binding protein 2 isoform 2 [Oreochromis
niloticus]
Length = 384
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH+PY QP+YR+YE+NKRLQ RTE SLW
Sbjct: 19 RRHSPYMVQPEYRIYEMNKRLQARTEESDSLW 50
>gi|345489285|ref|XP_003426091.1| PREDICTED: LIM domain-binding protein 2-like isoform 2 [Nasonia
vitripennis]
Length = 662
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RR PY+ QPDYR YELNKRLQQRTE +LW
Sbjct: 275 RRQPPYYQQPDYRFYELNKRLQQRTEESDNLW 306
>gi|410914455|ref|XP_003970703.1| PREDICTED: LIM domain-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 384
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH+PY QP+YR+YE+NKRLQ RTE SLW
Sbjct: 19 RRHSPYMVQPEYRIYEMNKRLQARTEESDSLW 50
>gi|348558555|ref|XP_003465083.1| PREDICTED: LIM domain-binding protein 2-like isoform 2 [Cavia
porcellus]
Length = 329
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|18858953|ref|NP_571389.1| LIM domain-binding protein 2 [Danio rerio]
gi|3078001|gb|AAC15796.1| LIM-domain binding factor 2 [Danio rerio]
Length = 385
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH+PY QP+YR+YE+NKRLQ RTE SLW
Sbjct: 19 RRHSPYMVQPEYRIYEMNKRLQSRTEESDSLW 50
>gi|2738118|gb|AAB96886.1| LIM homeobox protein cofactor CLIM-1b [Mus musculus]
Length = 331
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLW 50
>gi|410957939|ref|XP_003985581.1| PREDICTED: LIM domain-binding protein 2 isoform 2 [Felis catus]
Length = 331
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQARTEDSDNLW 50
>gi|410914453|ref|XP_003970702.1| PREDICTED: LIM domain-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 366
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH+PY QP+YR+YE+NKRLQ RTE SLW
Sbjct: 19 RRHSPYMVQPEYRIYEMNKRLQARTEESDSLW 50
>gi|432961080|ref|XP_004086564.1| PREDICTED: LIM domain-binding protein 2-like [Oryzias latipes]
Length = 409
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH+PY QP+YR+YE+NKRLQ RTE SLW
Sbjct: 19 RRHSPYMVQPEYRIYEMNKRLQARTEESDSLW 50
>gi|49900559|gb|AAH76070.1| Ldb2a protein [Danio rerio]
Length = 267
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDE 43
RRH+PY QP+YR+YE+NKRLQ RTE SLW + T+ E
Sbjct: 19 RRHSPYMVQPEYRIYEMNKRLQSRTEESDSLWWDAFATEFFE 60
>gi|326919388|ref|XP_003205963.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain-binding protein 2-like
[Meleagris gallopavo]
Length = 371
Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ R+E +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQARSEDSDNLW 50
>gi|45382267|ref|NP_990160.1| LIM domain-binding protein 2 [Gallus gallus]
gi|82177713|sp|Q9W676.1|LDB2_CHICK RecName: Full=LIM domain-binding protein 2; Short=LDB-2; AltName:
Full=Carboxyl-terminal LIM domain-binding protein 1;
Short=CLIM-1; AltName: Full=LIM domain-binding factor
CLIM1; Short=cLdb2
gi|4959040|gb|AAD34207.1|AF069990_1 LIM domain binding protein CLIM-1 [Gallus gallus]
Length = 371
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ R+E +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQARSEDSDNLW 50
>gi|108743256|dbj|BAE95404.1| LIM-domain-binding protein 2b [Gallus gallus]
Length = 330
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ R+E +LW
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQARSEDSDNLW 50
>gi|395841428|ref|XP_003793539.1| PREDICTED: LIM domain-binding protein 2 isoform 1 [Otolemur
garnettii]
Length = 373
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ R+E +LW
Sbjct: 19 RRHTPYVVQPEYRIYEMNKRLQSRSEDSDNLW 50
>gi|301618568|ref|XP_002938683.1| PREDICTED: LIM domain-binding protein 2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 373
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH+PY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHSPYMVQPEYRIYEMNKRLQTRTEDSDNLW 50
>gi|63990568|gb|AAY40912.1| unknown [Homo sapiens]
Length = 44
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE 30
RRHTPY QP+YR+YE+NKRLQ RTE
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTE 44
>gi|301618566|ref|XP_002938682.1| PREDICTED: LIM domain-binding protein 2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 397
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH+PY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHSPYMVQPEYRIYEMNKRLQTRTEDSDNLW 50
>gi|395841430|ref|XP_003793540.1| PREDICTED: LIM domain-binding protein 2 isoform 2 [Otolemur
garnettii]
Length = 331
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRHTPY QP+YR+YE+NKRLQ R+E +LW
Sbjct: 19 RRHTPYVVQPEYRIYEMNKRLQSRSEDSDNLW 50
>gi|229619783|dbj|BAH58090.1| LIM domain binding protein isoform 3 [Nematostella vectensis]
Length = 335
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 3/31 (9%)
Query: 6 RHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RHTPY+ PD R+YELN+RLQQRTE +LW
Sbjct: 15 RHTPYYTHPDVRIYELNRRLQQRTEESDNLW 45
>gi|229619781|dbj|BAH58089.1| LIM domain binding protein isoform 2 [Nematostella vectensis]
Length = 392
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 3/31 (9%)
Query: 6 RHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RHTPY+ PD R+YELN+RLQQRTE +LW
Sbjct: 15 RHTPYYTHPDVRIYELNRRLQQRTEESDNLW 45
>gi|229619779|dbj|BAH58088.1| LIM domain binding protein isoform 1 [Nematostella vectensis]
Length = 379
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 3/31 (9%)
Query: 6 RHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RHTPY+ PD R+YELN+RLQQRTE +LW
Sbjct: 15 RHTPYYTHPDVRIYELNRRLQQRTEESDNLW 45
>gi|229619785|dbj|BAH58091.1| LIM domain binding protein isoform 4 [Nematostella vectensis]
Length = 398
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 3/31 (9%)
Query: 6 RHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RHTPY+ PD R+YELN+RLQQRTE +LW
Sbjct: 15 RHTPYYTHPDVRIYELNRRLQQRTEESDNLW 45
>gi|108743262|dbj|BAE95407.1| LIM-domain-binding protein 2a [Xenopus laevis]
Length = 373
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH PY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHAPYMVQPEYRIYEMNKRLQTRTEDSDNLW 50
>gi|281352296|gb|EFB27880.1| hypothetical protein PANDA_004364 [Ailuropoda melanoleuca]
Length = 29
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE 30
RRHTPY QP+YR+YE+NKRLQ RTE
Sbjct: 4 RRHTPYMVQPEYRIYEMNKRLQSRTE 29
>gi|147900692|ref|NP_001089184.1| LIM domain-binding protein 2 [Xenopus laevis]
gi|123886630|sp|Q1EQW7.1|LDB2_XENLA RecName: Full=LIM domain-binding protein 2; Short=LDB-2;
Short=xLdb2
gi|108743260|dbj|BAE95406.1| LIM-domain-binding protein 2b [Xenopus laevis]
Length = 398
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH PY QP+YR+YE+NKRLQ RTE +LW
Sbjct: 19 RRHAPYMVQPEYRIYEMNKRLQTRTEDSDNLW 50
>gi|348532652|ref|XP_003453820.1| PREDICTED: LIM domain-binding protein 1-like [Oreochromis
niloticus]
Length = 414
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 59 GIGRHTPYGNQTDYRIYELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 107
>gi|4959042|gb|AAD34208.1|AF069991_1 CLIM-2 [Gallus gallus]
Length = 373
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|297490906|ref|XP_002698495.1| PREDICTED: LIM domain-binding protein 1 [Bos taurus]
gi|296472790|tpg|DAA14905.1| TPA: LIM domain binding 1-like [Bos taurus]
Length = 365
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 10 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 58
>gi|118403778|ref|NP_001072153.1| CLIM2 [Sus scrofa]
gi|115635848|dbj|BAF34370.1| CLIM2 [Sus scrofa]
Length = 373
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|47498004|ref|NP_998843.1| LIM domain-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|82185665|sp|Q6NVL6.1|LDB1_XENTR RecName: Full=LIM domain-binding protein 1; Short=LDB-1
gi|45709733|gb|AAH67989.1| LIM domain binding 1 [Xenopus (Silurana) tropicalis]
Length = 373
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|30584403|gb|AAP36453.1| Homo sapiens LIM domain binding 1 [synthetic construct]
gi|61369292|gb|AAX43312.1| LIM domain binding 1 [synthetic construct]
Length = 376
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|6754520|ref|NP_034827.1| LIM domain-binding protein 1 isoform 3 [Mus musculus]
gi|157820427|ref|NP_001101071.1| LIM domain-binding protein 1 [Rattus norvegicus]
gi|149689726|ref|XP_001499283.1| PREDICTED: LIM domain-binding protein 1-like isoform 1 [Equus
caballus]
gi|345792719|ref|XP_003433661.1| PREDICTED: LIM domain-binding protein 1 [Canis lupus familiaris]
gi|354491895|ref|XP_003508089.1| PREDICTED: LIM domain-binding protein 1 [Cricetulus griseus]
gi|395828209|ref|XP_003787278.1| PREDICTED: LIM domain-binding protein 1 isoform 2 [Otolemur
garnettii]
gi|410975974|ref|XP_003994402.1| PREDICTED: LIM domain-binding protein 1 [Felis catus]
gi|426252993|ref|XP_004020186.1| PREDICTED: LIM domain-binding protein 1 [Ovis aries]
gi|7513212|pir||JC6169 nuclear LIM interactor - human
gi|1568630|gb|AAC52887.1| nuclear LIM interactor [Mus musculus]
gi|1655971|gb|AAC52933.1| LIM domain binding protein 1 [Mus musculus]
gi|2827901|gb|AAC40064.1| LIM domain binding protein 1 [Mus musculus]
gi|15489011|gb|AAH13624.1| LIM domain binding 1 [Mus musculus]
gi|148710028|gb|EDL41974.1| LIM domain binding 1 [Mus musculus]
gi|149040292|gb|EDL94330.1| LIM domain binding 1 (predicted) [Rattus norvegicus]
gi|281352059|gb|EFB27643.1| hypothetical protein PANDA_001766 [Ailuropoda melanoleuca]
gi|344242142|gb|EGV98245.1| LIM domain-binding protein 1 [Cricetulus griseus]
gi|444517536|gb|ELV11639.1| LIM domain-binding protein 1 [Tupaia chinensis]
Length = 375
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|3077999|gb|AAC15795.1| LIM-domain binding factor 1 [Danio rerio]
Length = 374
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|3372807|gb|AAC28341.1| LIM homeobox protein cofactor [Homo sapiens]
Length = 375
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|327279061|ref|XP_003224277.1| PREDICTED: LIM domain-binding protein 1-like [Anolis
carolinensis]
Length = 373
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|332212656|ref|XP_003255435.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain-binding protein 1
[Nomascus leucogenys]
Length = 373
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|50417042|gb|AAH78225.1| Ldb1b protein [Danio rerio]
Length = 290
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|148236589|ref|NP_001090450.1| LIM domain-binding protein 1 [Xenopus laevis]
gi|1707005|gb|AAC60054.1| LIM domain binding protein 1 [Xenopus laevis]
gi|163916147|gb|AAI57503.1| LIM domain binding protein 1 [Xenopus laevis]
Length = 375
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|4504969|ref|NP_003884.1| LIM domain-binding protein 1 isoform 3 [Homo sapiens]
gi|114632517|ref|XP_001170821.1| PREDICTED: LIM domain-binding protein 1 isoform 2 [Pan
troglodytes]
gi|332834901|ref|XP_507999.3| PREDICTED: LIM domain-binding protein 1 isoform 3 [Pan
troglodytes]
gi|390473107|ref|XP_003734560.1| PREDICTED: LIM domain-binding protein 1 isoform 2 [Callithrix
jacchus]
gi|402881315|ref|XP_003904219.1| PREDICTED: LIM domain-binding protein 1 isoform 2 [Papio anubis]
gi|403259649|ref|XP_003922317.1| PREDICTED: LIM domain-binding protein 1 [Saimiri boliviensis
boliviensis]
gi|426366001|ref|XP_004050054.1| PREDICTED: LIM domain-binding protein 1 [Gorilla gorilla gorilla]
gi|426366010|ref|XP_004050058.1| PREDICTED: LIM domain-binding protein 1-like [Gorilla gorilla
gorilla]
gi|3357907|dbj|BAA31991.1| LIM homeobox protein cofactor (CLIM-2) [Homo sapiens]
gi|3746648|gb|AAC77818.1| LIM-domain binding factor CLIM2 [Homo sapiens]
gi|12653423|gb|AAH00482.1| LIM domain binding 1 [Homo sapiens]
gi|14328068|gb|AAH09246.1| LIM domain binding 1 [Homo sapiens]
gi|30582947|gb|AAP35703.1| LIM domain binding 1 [Homo sapiens]
gi|61359129|gb|AAX41672.1| LIM domain binding 1 [synthetic construct]
gi|119570107|gb|EAW49722.1| LIM domain binding 1, isoform CRA_a [Homo sapiens]
gi|123979738|gb|ABM81698.1| LIM domain binding 1 [synthetic construct]
gi|123994515|gb|ABM84859.1| LIM domain binding 1 [synthetic construct]
gi|261858234|dbj|BAI45639.1| LIM domain binding 1 [synthetic construct]
gi|355562730|gb|EHH19324.1| hypothetical protein EGK_20007 [Macaca mulatta]
gi|355783051|gb|EHH64972.1| hypothetical protein EGM_18307 [Macaca fascicularis]
Length = 375
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|147906280|ref|NP_001080549.1| LIM domain binding 1 [Xenopus laevis]
gi|158518421|sp|P70060.2|LDB1_XENLA RecName: Full=LIM domain-binding protein 1; Short=LDB-1;
Short=xLdb1
gi|27694848|gb|AAH44043.1| Chi-prov protein [Xenopus laevis]
Length = 375
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|2582524|gb|AAB82582.1| neural src interacting protein, short form [Gallus gallus]
Length = 375
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|62205315|gb|AAH93137.1| Ldb1b protein [Danio rerio]
Length = 286
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|348578447|ref|XP_003474994.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain-binding protein 1-like
[Cavia porcellus]
Length = 452
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 97 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 145
>gi|345307651|ref|XP_001511124.2| PREDICTED: LIM domain-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 410
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 57 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 105
>gi|2738116|gb|AAB96885.1| LIM homeobox protein cofactor CLIM-2 [Mus musculus]
Length = 375
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|122891685|dbj|BAE95405.2| LIM-domain-binding protein 1b [Xenopus laevis]
Length = 304
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|108743252|dbj|BAE95402.1| LIM-domain-binding protein 1b [Homo sapiens]
gi|194373947|dbj|BAG62286.1| unnamed protein product [Homo sapiens]
Length = 316
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|395502273|ref|XP_003755506.1| PREDICTED: LIM domain-binding protein 1 [Sarcophilus harrisii]
Length = 418
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 63 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 111
>gi|108743250|dbj|BAE95401.1| LIM-domain-binding protein 1b [Mus musculus]
Length = 319
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|387016716|gb|AFJ50477.1| LIM domain-binding protein 1 [Crotalus adamanteus]
Length = 411
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 56 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 89
>gi|194678997|ref|XP_604843.4| PREDICTED: LIM domain-binding protein 1 [Bos taurus]
Length = 400
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 45 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 93
>gi|440912413|gb|ELR61983.1| LIM domain-binding protein 1, partial [Bos grunniens mutus]
Length = 403
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 48 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 96
>gi|338716632|ref|XP_003363479.1| PREDICTED: LIM domain-binding protein 1-like isoform 2 [Equus
caballus]
Length = 435
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 80 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 113
>gi|351715608|gb|EHB18527.1| LIM domain-binding protein 1 [Heterocephalus glaber]
Length = 424
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 52 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 100
>gi|5123791|emb|CAB45409.1| Nuclear LIM interactor [Homo sapiens]
Length = 402
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 47 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 95
>gi|326923786|ref|XP_003208115.1| PREDICTED: LIM domain-binding protein 1-like [Meleagris
gallopavo]
Length = 323
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|291404706|ref|XP_002718724.1| PREDICTED: LIM domain binding 2 [Oryctolagus cuniculus]
Length = 416
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 61 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 94
>gi|119570109|gb|EAW49724.1| LIM domain binding 1, isoform CRA_c [Homo sapiens]
gi|380817618|gb|AFE80683.1| LIM domain-binding protein 1 isoform 1 [Macaca mulatta]
gi|383422513|gb|AFH34470.1| LIM domain-binding protein 1 isoform 1 [Macaca mulatta]
gi|384950120|gb|AFI38665.1| LIM domain-binding protein 1 isoform 1 [Macaca mulatta]
Length = 409
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 56 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 104
>gi|108743254|dbj|BAE95403.1| LIM-domain-binding protein 1b [Gallus gallus]
Length = 323
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 68
>gi|334314224|ref|XP_001369415.2| PREDICTED: LIM domain-binding protein 1-like [Monodelphis
domestica]
Length = 411
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 56 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 104
>gi|108743246|dbj|BAE95399.1| LIM-domain-binding protein 4b [Anguilla japonica]
Length = 352
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 56 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 104
>gi|164663818|ref|NP_001106879.1| LIM domain-binding protein 1 isoform 1 [Mus musculus]
gi|301756168|ref|XP_002913924.1| PREDICTED: LIM domain-binding protein 1-like [Ailuropoda
melanoleuca]
gi|344274807|ref|XP_003409206.1| PREDICTED: LIM domain-binding protein 1-like [Loxodonta africana]
gi|345792721|ref|XP_850926.2| PREDICTED: LIM domain-binding protein 1 isoform 2 [Canis lupus
familiaris]
gi|395828207|ref|XP_003787277.1| PREDICTED: LIM domain-binding protein 1 isoform 1 [Otolemur
garnettii]
gi|158518422|sp|P70662.2|LDB1_MOUSE RecName: Full=LIM domain-binding protein 1; Short=LDB-1; AltName:
Full=Carboxyl-terminal LIM domain-binding protein 2;
Short=CLIM-2; AltName: Full=LIM domain-binding factor
CLIM2; Short=mLdb1; AltName: Full=Nuclear LIM
interactor
gi|2736284|gb|AAB94131.1| Ldb1a [Mus musculus]
Length = 411
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 56 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 89
>gi|432847932|ref|XP_004066221.1| PREDICTED: LIM domain-binding protein 1-like [Oryzias latipes]
Length = 412
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 57 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 90
>gi|164663816|ref|NP_001106878.1| LIM domain-binding protein 1 isoform 1 [Homo sapiens]
gi|388454260|ref|NP_001253346.1| LIM domain-binding protein 1 [Macaca mulatta]
gi|296221078|ref|XP_002756595.1| PREDICTED: LIM domain-binding protein 1 isoform 1 [Callithrix
jacchus]
gi|297687258|ref|XP_002821133.1| PREDICTED: LIM domain-binding protein 1 [Pongo abelii]
gi|402881313|ref|XP_003904218.1| PREDICTED: LIM domain-binding protein 1 isoform 1 [Papio anubis]
gi|158518615|sp|Q86U70.2|LDB1_HUMAN RecName: Full=LIM domain-binding protein 1; Short=LDB-1; AltName:
Full=Carboxyl-terminal LIM domain-binding protein 2;
Short=CLIM-2; AltName: Full=LIM domain-binding factor
CLIM2; Short=hLdb1; AltName: Full=Nuclear LIM
interactor
gi|119570108|gb|EAW49723.1| LIM domain binding 1, isoform CRA_b [Homo sapiens]
gi|380817616|gb|AFE80682.1| LIM domain-binding protein 1 isoform 1 [Macaca mulatta]
gi|383422515|gb|AFH34471.1| LIM domain-binding protein 1 isoform 1 [Macaca mulatta]
gi|384950122|gb|AFI38666.1| LIM domain-binding protein 1 isoform 1 [Macaca mulatta]
gi|410206908|gb|JAA00673.1| LIM domain binding 1 [Pan troglodytes]
gi|410256082|gb|JAA16008.1| LIM domain binding 1 [Pan troglodytes]
gi|410307150|gb|JAA32175.1| LIM domain binding 1 [Pan troglodytes]
gi|410335897|gb|JAA36895.1| LIM domain binding 1 [Pan troglodytes]
Length = 411
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 56 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 89
>gi|46048789|ref|NP_990401.1| LIM domain-binding protein 1 [Gallus gallus]
gi|82069404|sp|O42252.1|LDB1_CHICK RecName: Full=LIM domain-binding protein 1; Short=LDB-1; AltName:
Full=Carboxyl-terminal LIM domain-binding protein 2;
Short=CLIM-2; AltName: Full=LIM domain-binding factor
CLIM2; Short=cLdb1; AltName: Full=Neural
Src-interacting protein; AltName: Full=Nuclear LIM
interactor
gi|2582522|gb|AAB82581.1| neural src interacting protein, long form [Gallus gallus]
Length = 411
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 56 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 89
>gi|18858957|ref|NP_571391.1| LIM domain-binding protein 1-A [Danio rerio]
gi|82070357|sp|O73715.1|LDB1A_DANRE RecName: Full=LIM domain-binding protein 1-A; Short=LDB-1-A;
AltName: Full=LIM domain-binding protein 4;
Short=LDB-4; Short=zLdb4
gi|3078005|gb|AAC15798.1| LIM-domain binding factor 4 [Danio rerio]
Length = 374
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE----SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEQDCDNLWWDAFTTEFFED--DAML 69
>gi|417410636|gb|JAA51786.1| Putative lim domain binding protein ldb1/nli/clim, partial
[Desmodus rotundus]
Length = 430
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 75 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 108
>gi|355699144|gb|AES01033.1| LIM domain binding 1 [Mustela putorius furo]
Length = 327
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 49 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 97
>gi|431895496|gb|ELK05012.1| LIM domain-binding protein 1, partial [Pteropus alecto]
Length = 453
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 100 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 133
>gi|397510720|ref|XP_003825739.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain-binding protein 1,
partial [Pan paniscus]
Length = 408
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 53 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 86
>gi|187469679|gb|AAI66757.1| Ldb1 protein [Rattus norvegicus]
Length = 467
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
G+ RHTPY Q DYR++ELNKRLQ TE +LW
Sbjct: 114 GIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLW 147
>gi|108743248|dbj|BAE95400.1| LIM-domain-binding protein 4b [Danio rerio]
Length = 315
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE----SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTEQDCDNLWWDAFTTEFFED--DAML 69
>gi|54038373|gb|AAH84686.1| Ldb1a protein [Danio rerio]
Length = 352
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 56 GIGRHTPYGNQTDYRIFELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 104
>gi|327284918|ref|XP_003227182.1| PREDICTED: LIM domain-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 377
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH PY QP+YR+YE+NKRLQ R+E +LW
Sbjct: 19 RRHAPYMVQPEYRLYEMNKRLQARSEDSDNLW 50
>gi|66910434|gb|AAH97093.1| Ldb1a protein [Danio rerio]
gi|197247187|gb|AAI64854.1| Ldb1a protein [Danio rerio]
Length = 359
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE----SLWSSSPETKVDESMYDCML 50
G+ RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 64 GIGRHTPYGNQTDYRIFELNKRLQNWTEQDCDNLWWDAFTTEFFED--DAML 113
>gi|2245693|gb|AAB62577.1| short form of CHIP [Drosophila melanogaster]
Length = 365
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTES----LWSSSPETKVDESMYDCMLLCDE 54
G RRH YF ++RV+ELNKRLQQR E W S ++ +L C E
Sbjct: 205 GFRRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLE 260
>gi|327284920|ref|XP_003227183.1| PREDICTED: LIM domain-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 335
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLW 33
RRH PY QP+YR+YE+NKRLQ R+E +LW
Sbjct: 19 RRHAPYMVQPEYRLYEMNKRLQARSEDSDNLW 50
>gi|194754377|ref|XP_001959472.1| GF12038 [Drosophila ananassae]
gi|190620770|gb|EDV36294.1| GF12038 [Drosophila ananassae]
Length = 577
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTES----LWSSSPETKVDESMYDCMLLCDE 54
G RRH YF ++RV+ELNKRLQQR E W S ++ +L C E
Sbjct: 205 GFRRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLE 260
>gi|83165282|ref|NP_571388.2| LIM domain-binding protein 1 [Danio rerio]
gi|82414852|gb|AAI10114.1| LIM-domain binding factor 1b [Danio rerio]
Length = 374
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G+ RHTPY Q DYR++ELNKRLQ TE
Sbjct: 20 GIGRHTPYGNQTDYRIFELNKRLQNWTE 47
>gi|195151267|ref|XP_002016569.1| GL10430 [Drosophila persimilis]
gi|194110416|gb|EDW32459.1| GL10430 [Drosophila persimilis]
Length = 567
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 194 GFRRHNSYFSHTEHRVFELNKRLQQRNE 221
>gi|198458034|ref|XP_001360884.2| GA17778 [Drosophila pseudoobscura pseudoobscura]
gi|198136197|gb|EAL25459.2| GA17778 [Drosophila pseudoobscura pseudoobscura]
Length = 567
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 194 GFRRHNSYFSHTEHRVFELNKRLQQRNE 221
>gi|195382547|ref|XP_002049991.1| GJ20439 [Drosophila virilis]
gi|194144788|gb|EDW61184.1| GJ20439 [Drosophila virilis]
Length = 579
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 207 GFRRHNSYFSHTEHRVFELNKRLQQRNE 234
>gi|195028420|ref|XP_001987074.1| GH21714 [Drosophila grimshawi]
gi|193903074|gb|EDW01941.1| GH21714 [Drosophila grimshawi]
Length = 579
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 207 GFRRHNSYFSHTEHRVFELNKRLQQRNE 234
>gi|17137074|ref|NP_477082.1| chip, isoform A [Drosophila melanogaster]
gi|2245687|gb|AAB62574.1| CHIP [Drosophila melanogaster]
gi|7291720|gb|AAF47142.1| chip, isoform A [Drosophila melanogaster]
gi|16198019|gb|AAL13790.1| LD25129p [Drosophila melanogaster]
gi|220945870|gb|ACL85478.1| Chi-PA [synthetic construct]
Length = 577
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 205 GFRRHNSYFSHTEHRVFELNKRLQQRNE 232
>gi|194886013|ref|XP_001976531.1| GG19962 [Drosophila erecta]
gi|195489464|ref|XP_002092749.1| GE11494 [Drosophila yakuba]
gi|190659718|gb|EDV56931.1| GG19962 [Drosophila erecta]
gi|194178850|gb|EDW92461.1| GE11494 [Drosophila yakuba]
Length = 596
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 224 GFRRHNSYFSHTEHRVFELNKRLQQRNE 251
>gi|195586277|ref|XP_002082904.1| GD24979 [Drosophila simulans]
gi|194194913|gb|EDX08489.1| GD24979 [Drosophila simulans]
Length = 596
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 224 GFRRHNSYFSHTEHRVFELNKRLQQRNE 251
>gi|195122710|ref|XP_002005854.1| GI18855 [Drosophila mojavensis]
gi|193910922|gb|EDW09789.1| GI18855 [Drosophila mojavensis]
Length = 548
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 176 GFRRHNSYFSHTEHRVFELNKRLQQRNE 203
>gi|195341794|ref|XP_002037490.1| GM18282 [Drosophila sechellia]
gi|194132340|gb|EDW53908.1| GM18282 [Drosophila sechellia]
Length = 596
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 224 GFRRHNSYFSHTEHRVFELNKRLQQRNE 251
>gi|45551162|ref|NP_726403.2| chip, isoform B [Drosophila melanogaster]
gi|45445394|gb|AAM68293.2| chip, isoform B [Drosophila melanogaster]
gi|297591868|gb|ADI46811.1| RE67266p [Drosophila melanogaster]
Length = 596
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE 30
G RRH YF ++RV+ELNKRLQQR E
Sbjct: 224 GFRRHNSYFSHTEHRVFELNKRLQQRNE 251
>gi|194769675|ref|XP_001966927.1| GF19017 [Drosophila ananassae]
gi|190618026|gb|EDV33550.1| GF19017 [Drosophila ananassae]
Length = 218
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDE 43
G RRH YF ++RV+ELNKRLQQR E + W S T++ E
Sbjct: 86 GFRRHNSYFSHIEHRVFELNKRLQQRKEESDNCWWDSFTTEIFE 129
>gi|195430878|ref|XP_002063475.1| GK21383 [Drosophila willistoni]
gi|194159560|gb|EDW74461.1| GK21383 [Drosophila willistoni]
Length = 584
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQR---TESLWSSSPETKVDE 43
G RRH YF ++RV+ELNKRLQQR +++ W S T+ E
Sbjct: 212 GFRRHNSYFSHTEHRVFELNKRLQQRNDESDNCWWDSFTTEFFE 255
>gi|443726789|gb|ELU13848.1| hypothetical protein CAPTEDRAFT_153625 [Capitella teleta]
Length = 381
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 22/26 (84%), Gaps = 3/26 (11%)
Query: 11 FGQPDYRVYELNKRLQQRTE---SLW 33
GQPDYR+YELNKRLQQR+E +LW
Sbjct: 1 MGQPDYRIYELNKRLQQRSEESDNLW 26
>gi|47211919|emb|CAF93052.1| unnamed protein product [Tetraodon nigroviridis]
Length = 388
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 6 RHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
RHTPY Q DYR++ELNKRLQ TE +LW + T+ E D ML
Sbjct: 1 RHTPYGNQSDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED--DAML 46
>gi|432905306|ref|XP_004077440.1| PREDICTED: LIM domain-binding protein 1-like [Oryzias latipes]
Length = 364
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ R TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 15 GMGRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 63
>gi|120564934|tpd|FAA00305.1| TPA: LIM-domain-binding protein 4a [Gasterosteus aculeatus]
Length = 371
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ R TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GMGRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 68
>gi|120564943|tpd|FAA00311.1| TPA: LIM-domain-binding protein 4a [Oryzias latipes]
Length = 364
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ R TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 13 GMGRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 61
>gi|120564937|tpd|FAA00307.1| TPA: LIM-domain-binding protein 4a [Tetraodon nigroviridis]
Length = 371
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ R TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GMGRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 68
>gi|391329647|ref|XP_003739281.1| PREDICTED: LIM domain-binding protein 2-like [Metaseiulus
occidentalis]
Length = 385
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 3/30 (10%)
Query: 7 HTPYFGQPDYRVYELNKRLQQRTE---SLW 33
H +FGQ +YR+YE+NKRL QRTE +LW
Sbjct: 33 HAQFFGQTEYRIYEMNKRLSQRTEDSDNLW 62
>gi|120564936|tpd|FAA00306.1| TPA: LIM-domain-binding protein 4b [Tetraodon nigroviridis]
Length = 314
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ R TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GMGRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 68
>gi|120564933|tpd|FAA00304.1| TPA: LIM-domain-binding protein 4b [Gasterosteus aculeatus]
Length = 314
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ R TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 20 GMGRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 68
>gi|410901284|ref|XP_003964126.1| PREDICTED: LIM domain-binding protein 1-like [Takifugu rubripes]
Length = 409
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ R TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 57 GMGRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 105
>gi|120564942|tpd|FAA00310.1| TPA: LIM-domain-binding protein 4b [Oryzias latipes]
Length = 307
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ R TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 13 GMGRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 61
>gi|348506998|ref|XP_003441044.1| PREDICTED: LIM domain-binding protein 1-like [Oreochromis
niloticus]
Length = 412
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 3 GVRRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
G+ R TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 57 GMGRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 105
>gi|47209586|emb|CAF91649.1| unnamed protein product [Tetraodon nigroviridis]
Length = 466
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTE---SLWSSSPETKVDESMYDCML 50
RR TPY Q DYR+YELNKRLQ TE +LW + T+ E D ML
Sbjct: 81 RRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFED--DAML 127
>gi|18858955|ref|NP_571390.1| LIM-domain binding factor 2b [Danio rerio]
gi|3078003|gb|AAC15797.1| LIM-domain binding factor 3 [Danio rerio]
gi|58475729|gb|AAH90063.1| LIM-domain binding factor 2b [Danio rerio]
gi|182891418|gb|AAI64481.1| Ldb2b protein [Danio rerio]
Length = 384
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 5 RRHTPYFGQPDYRVYELNKRLQQRTES---LW 33
RRH PY QP+YR++ELNKRLQ R E LW
Sbjct: 19 RRHAPYPVQPEYRMHELNKRLQSRPEDCDILW 50
>gi|256080106|ref|XP_002576324.1| lim domain binding protein [Schistosoma mansoni]
gi|350646010|emb|CCD59287.1| lim domain binding protein, putative [Schistosoma mansoni]
Length = 1419
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 12 GQPDYRVYELNKRLQQRT---ESLWSSSPETKV--DESMYDCMLLCDELP 56
GQP+ R++E+NKRLQQR+ +SLW S T D++ L +E P
Sbjct: 188 GQPELRIFEMNKRLQQRSDDCDSLWWESFATDFFEDDATLTLAFLTEEGP 237
>gi|198430509|ref|XP_002127584.1| PREDICTED: similar to LIM domain binding protein CLIM-1 [Ciona
intestinalis]
Length = 371
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 21/26 (80%)
Query: 6 RHTPYFGQPDYRVYELNKRLQQRTES 31
RH P PDY++Y++NKRLQ+RT++
Sbjct: 14 RHPPIMLPPDYKIYQMNKRLQERTDN 39
>gi|426343914|ref|XP_004065316.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain-binding protein 2,
partial [Gorilla gorilla gorilla]
Length = 212
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 13 QPDYRVYELNKRLQQRTE---SLWSSSPETKVDE 43
QP+YR+YE+NKRLQ RTE +LW + T+ E
Sbjct: 3 QPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFE 36
>gi|402869005|ref|XP_003919491.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain-binding protein 2,
partial [Papio anubis]
Length = 202
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 13 QPDYRVYELNKRLQQRTE---SLWSSSPETKVDE 43
QP+YR+YE+NKRLQ RTE +LW + T+ E
Sbjct: 3 QPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFE 36
>gi|3044066|gb|AAC13274.1| LIM domain binding protein [Homo sapiens]
Length = 347
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%), Gaps = 3/24 (12%)
Query: 13 QPDYRVYELNKRLQQRTE---SLW 33
QP+YR+YE+NKRLQ RTE +LW
Sbjct: 3 QPEYRIYEMNKRLQSRTEDSDNLW 26
>gi|328715247|ref|XP_001946705.2| PREDICTED: hypothetical protein LOC100160089 [Acyrthosiphon pisum]
Length = 1131
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 13 QPDYRVYELNKRLQQRTE 30
QPDYR++ELNKRLQ R E
Sbjct: 472 QPDYRIFELNKRLQNRNE 489
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,114,290,308
Number of Sequences: 23463169
Number of extensions: 32514572
Number of successful extensions: 66814
Number of sequences better than 100.0: 171
Number of HSP's better than 100.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 66644
Number of HSP's gapped (non-prelim): 171
length of query: 61
length of database: 8,064,228,071
effective HSP length: 33
effective length of query: 28
effective length of database: 7,289,943,494
effective search space: 204118417832
effective search space used: 204118417832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)