Query psy2758
Match_columns 72
No_of_seqs 114 out of 134
Neff 4.2
Searched_HMMs 29240
Date Sat Aug 17 00:26:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2758.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2758hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bm4_A Protein (moloney murine 67.5 2.1 7.2E-05 22.5 1.1 19 42-60 7-25 (32)
2 1jwq_A N-acetylmuramoyl-L-alan 59.6 8.6 0.0003 25.5 3.3 31 32-69 90-120 (179)
3 3q6m_A Heat shock protein HSP 48.5 12 0.00041 29.1 2.8 21 48-68 389-409 (448)
4 1f80_D Acyl carrier protein; t 48.1 17 0.00058 19.9 2.8 17 52-68 7-23 (81)
5 3czx_A Putative N-acetylmuramo 48.0 15 0.0005 24.3 2.9 29 33-69 89-117 (182)
6 2hhj_A Bisphosphoglycerate mut 47.4 12 0.0004 25.4 2.4 25 39-63 147-171 (267)
7 2z3x_A SAsp, small, acid-solub 46.3 14 0.00049 21.7 2.4 20 50-69 8-27 (63)
8 1sf8_A Chaperone protein HTPG; 45.0 16 0.00056 23.4 2.7 17 46-62 109-125 (126)
9 3fwu_A Macrophage migration in 44.2 26 0.00088 22.1 3.5 37 30-69 77-113 (133)
10 2aje_A Telomere repeat-binding 42.0 15 0.00052 23.1 2.2 25 39-63 68-92 (105)
11 3abf_A 4-oxalocrotonate tautom 40.9 29 0.00099 18.1 3.0 32 34-68 4-35 (64)
12 2xcz_A Possible ATLS1-like lig 40.2 44 0.0015 19.7 4.0 38 29-69 55-92 (115)
13 1rbl_M Ribulose 1,5 bisphospha 40.0 18 0.00061 23.2 2.2 21 37-63 15-35 (109)
14 3hjc_A Heat shock protein 83-1 38.6 20 0.00068 27.7 2.7 24 46-69 403-426 (444)
15 1svd_M Ribulose bisphosphate c 37.3 20 0.00067 23.0 2.1 21 37-63 17-37 (110)
16 1xov_A PLY protein, plypsa; al 36.2 24 0.00083 25.9 2.7 31 34-69 100-130 (326)
17 3zxw_B Ribulose bisphosphate c 35.8 25 0.00087 22.8 2.5 21 37-63 14-34 (118)
18 3t5s_A Gilaa.00834.A, macropha 35.2 40 0.0014 21.2 3.4 37 30-69 77-113 (135)
19 3b64_A Macrophage migration in 34.8 48 0.0016 19.5 3.5 37 30-69 56-92 (112)
20 2cge_A ATP-dependent molecular 34.2 26 0.00089 26.5 2.7 21 46-66 385-405 (405)
21 2z5b_A Protein YPL144W, DMP1; 34.1 16 0.00056 24.9 1.4 23 46-68 92-114 (151)
22 1e4v_A Adenylate kinase; trans 34.1 32 0.0011 21.9 2.8 39 23-61 117-172 (214)
23 2ckx_A NGTRF1, telomere bindin 33.9 34 0.0012 20.4 2.7 25 39-63 55-79 (83)
24 2o1u_A Endoplasmin; GRP94, HSP 33.7 28 0.00096 28.1 2.9 23 46-68 640-662 (666)
25 2wkb_A Macrophage migration in 33.3 61 0.0021 19.6 3.9 37 30-69 56-92 (125)
26 3oga_A Nucleoside triphosphata 33.2 47 0.0016 20.1 3.4 31 35-68 55-85 (165)
27 1v37_A Phosphoglycerate mutase 31.9 37 0.0013 21.5 2.8 19 46-64 106-124 (177)
28 1rya_A GDP-mannose mannosyl hy 31.6 44 0.0015 19.8 3.0 30 36-68 45-74 (160)
29 1hfo_A Migration inhibitory fa 31.5 37 0.0013 20.0 2.6 37 30-69 55-91 (113)
30 3d4i_A STS-2 protein; PGM, 2H- 31.4 42 0.0014 22.4 3.1 19 45-63 167-185 (273)
31 3hjg_A Putative alpha-ribazole 31.4 38 0.0013 22.0 2.9 19 45-63 117-135 (213)
32 3mbk_A Ubiquitin-associated an 31.2 48 0.0016 22.0 3.4 19 45-63 158-176 (264)
33 3c7t_A Ecdysteroid-phosphate p 31.1 38 0.0013 22.6 2.8 18 46-63 158-175 (263)
34 1aky_A Adenylate kinase; ATP:A 30.9 40 0.0014 21.5 2.9 32 32-63 140-183 (220)
35 3gp3_A 2,3-bisphosphoglycerate 30.9 48 0.0017 21.9 3.4 19 45-63 155-173 (257)
36 2opa_A Probable tautomerase YW 30.5 44 0.0015 17.2 2.6 33 34-69 3-35 (61)
37 3f3k_A Uncharacterized protein 30.5 38 0.0013 22.7 2.8 19 45-63 136-154 (265)
38 2o1c_A DATP pyrophosphohydrola 29.9 41 0.0014 19.5 2.6 30 36-68 35-64 (150)
39 1uiz_A MIF, macrophage migrati 29.7 40 0.0014 19.9 2.6 38 29-69 55-92 (115)
40 1qhf_A Protein (phosphoglycera 29.7 53 0.0018 21.4 3.4 19 45-63 146-164 (240)
41 1bxn_I Rubisco, protein (ribul 29.6 32 0.0011 22.9 2.2 21 37-63 9-29 (139)
42 1e58_A Phosphoglycerate mutase 29.6 56 0.0019 21.4 3.5 19 45-63 148-166 (249)
43 2a6p_A Possible phosphoglycera 29.5 42 0.0014 21.7 2.8 19 45-63 119-137 (208)
44 2azw_A MUTT/nudix family prote 29.4 39 0.0013 19.7 2.5 31 35-68 41-71 (148)
45 3grn_A MUTT related protein; s 29.3 52 0.0018 19.6 3.1 30 36-68 37-66 (153)
46 1h2e_A Phosphatase, YHFR; hydr 29.1 41 0.0014 21.7 2.7 18 46-63 118-135 (207)
47 3ees_A Probable pyrophosphohyd 29.0 48 0.0017 19.3 2.8 30 36-68 49-78 (153)
48 2l9f_A CALE8, meacp; transfera 28.9 32 0.0011 21.7 2.0 19 51-69 13-31 (102)
49 1bwv_S Rubisco, protein (ribul 28.8 32 0.0011 22.9 2.1 20 38-63 10-29 (138)
50 1vcd_A NDX1; nudix protein, di 28.6 54 0.0019 18.5 3.0 31 35-68 24-54 (126)
51 3fwt_A Macrophage migration in 28.6 51 0.0017 20.6 3.0 37 30-69 77-113 (133)
52 3r7a_A Phosphoglycerate mutase 28.5 45 0.0015 21.7 2.8 19 45-63 146-164 (237)
53 2os5_A Acemif; macrophage migr 28.1 44 0.0015 19.9 2.6 37 30-69 56-92 (119)
54 2i9o_A MHB8A peptide; beta-hai 28.0 46 0.0016 17.6 2.3 17 47-63 20-36 (37)
55 1fzt_A Phosphoglycerate mutase 27.9 48 0.0016 21.3 2.9 18 46-63 129-146 (211)
56 4f0h_B Ribulose bisphosphate c 27.5 35 0.0012 22.8 2.1 20 38-63 10-29 (138)
57 3i24_A HIT family hydrolase; s 27.4 13 0.00045 24.1 0.0 25 46-70 118-142 (149)
58 3shd_A Phosphatase NUDJ; nudix 27.2 76 0.0026 18.7 3.5 31 35-68 29-59 (153)
59 1otf_A 4-oxalocrotonate tautom 27.1 54 0.0018 16.8 2.5 24 46-69 12-35 (62)
60 1sjy_A MUTT/nudix family prote 27.1 58 0.002 19.3 3.0 31 35-68 43-73 (159)
61 4emb_A 2,3-bisphosphoglycerate 26.2 65 0.0022 21.6 3.4 20 44-63 172-191 (274)
62 2x4k_A 4-oxalocrotonate tautom 26.1 59 0.002 16.5 2.6 23 46-68 15-37 (63)
63 3tlx_A Adenylate kinase 2; str 26.0 26 0.00088 23.3 1.3 41 23-63 150-207 (243)
64 3kkk_A Phosphoglycerate mutase 25.5 70 0.0024 21.0 3.4 19 45-63 157-175 (258)
65 2qni_A AGR_C_517P, uncharacter 25.4 52 0.0018 21.8 2.7 18 46-63 130-147 (219)
66 4dh4_A MIF; trimer, isomerase; 25.4 60 0.0021 19.2 2.8 37 30-69 56-92 (114)
67 1gk8_I Ribulose bisphosphate c 25.1 41 0.0014 22.5 2.2 20 38-63 17-36 (140)
68 2i9n_A MHB4A peptide; beta-hai 25.1 40 0.0014 17.4 1.6 17 47-63 16-32 (33)
69 2pqv_A MUTT/nudix family prote 25.0 50 0.0017 19.6 2.4 31 35-68 39-69 (154)
70 1wdd_S Ribulose bisphosphate c 24.9 42 0.0015 22.0 2.2 20 38-63 17-36 (128)
71 3bho_A Cleavage and polyadenyl 24.3 65 0.0022 22.6 3.2 29 36-67 84-112 (208)
72 3gwy_A Putative CTP pyrophosph 24.2 75 0.0025 18.6 3.1 30 36-68 35-64 (140)
73 4esw_A Pyrimidine biosynthesis 24.2 94 0.0032 21.1 3.9 35 37-71 303-340 (342)
74 3d8h_A Glycolytic phosphoglyce 24.1 76 0.0026 21.3 3.4 19 45-63 166-184 (267)
75 2rrk_A ORF135, CTP pyrophospho 24.0 72 0.0025 18.3 2.9 30 36-68 36-65 (140)
76 3lfh_A Manxa, phosphotransfera 24.0 63 0.0021 20.6 2.8 20 45-64 38-57 (144)
77 2lol_A ACP, acyl carrier prote 23.8 82 0.0028 16.9 3.0 19 50-68 4-22 (81)
78 3id9_A MUTT/nudix family prote 23.6 74 0.0025 19.2 3.0 30 36-68 47-76 (171)
79 1pdo_A Mannose permease; phosp 23.4 56 0.0019 20.2 2.5 19 45-63 36-54 (135)
80 3son_A Hypothetical nudix hydr 23.1 65 0.0022 19.0 2.6 31 35-68 31-61 (149)
81 2qnw_A Acyl carrier protein; m 22.9 57 0.002 17.8 2.2 20 49-68 4-23 (82)
82 1yfk_A Phosphoglycerate mutase 22.4 88 0.003 20.9 3.5 19 45-63 151-169 (262)
83 2hzm_A RNA polymerase II media 22.3 92 0.0032 22.1 3.6 27 31-63 152-178 (212)
84 1mut_A MUTT, nucleoside tripho 22.3 83 0.0028 17.7 2.9 30 36-68 32-61 (129)
85 1im4_A DBH; DNA polymerase PAL 22.1 42 0.0014 22.7 1.8 32 37-68 112-145 (221)
86 3e9c_A ZGC:56074; histidine ph 21.9 62 0.0021 21.7 2.6 18 46-63 121-138 (265)
87 3gzm_A Acyl carrier protein; h 21.7 73 0.0025 17.4 2.5 19 50-68 3-21 (81)
88 2peb_A Putative dioxygenase; s 21.7 99 0.0034 20.0 3.4 26 34-67 14-39 (122)
89 3u53_A BIS(5'-nucleosyl)-tetra 21.7 85 0.0029 18.8 3.0 30 37-69 38-67 (155)
90 2kdv_A RNA pyrophosphohydrolas 21.6 84 0.0029 19.3 3.0 31 35-68 31-61 (164)
91 2jvb_A Protein PSU1, mRNA-deca 21.5 78 0.0027 18.5 2.8 31 36-69 29-59 (146)
92 2kwl_A ACP, acyl carrier prote 21.5 74 0.0025 17.4 2.5 20 49-68 6-25 (84)
93 2pbt_A AP4A hydrolase; nudix p 21.4 69 0.0023 18.2 2.4 31 35-68 25-55 (134)
94 3r03_A Nudix hydrolase; struct 21.2 94 0.0032 17.9 3.1 30 36-68 36-65 (144)
95 3gqc_A DNA repair protein REV1 20.9 63 0.0022 24.9 2.7 33 36-68 242-276 (504)
96 1f3y_A Diadenosine 5',5'''-P1, 20.9 1.2E+02 0.004 17.8 3.5 31 35-68 38-68 (165)
97 2v0o_A FCHO2, FCH domain only 20.7 37 0.0013 22.6 1.2 17 4-20 5-21 (276)
98 3hvz_A Uncharacterized protein 20.5 50 0.0017 19.3 1.7 20 45-64 21-40 (78)
99 3djh_A Macrophage migration in 20.5 76 0.0026 18.9 2.6 36 31-69 56-91 (114)
100 3gg6_A Nudix motif 18, nucleos 20.3 75 0.0026 18.9 2.5 30 36-68 47-76 (156)
101 4dez_A POL IV 1, DNA polymeras 20.2 83 0.0028 22.3 3.1 33 35-68 107-139 (356)
102 2yyh_A MUTT domain, 8-OXO-DGTP 20.1 1E+02 0.0034 17.9 3.0 29 37-68 39-67 (139)
103 3f13_A Putative nudix hydrolas 20.1 72 0.0025 19.9 2.5 32 35-69 37-68 (163)
104 1s2x_A CAG-Z; CAG pathogenicit 20.0 57 0.002 22.6 2.1 18 43-60 45-62 (206)
No 1
>1bm4_A Protein (moloney murine leukemia virus capsid); moloney murine leukemia virus capsid protein, momlv, MU-MLV, MHR, major homology region; NMR {Synthetic} SCOP: j.47.1.1
Probab=67.55 E-value=2.1 Score=22.52 Aligned_cols=19 Identities=37% Similarity=0.564 Sum_probs=16.0
Q ss_pred ccCCCCCCHHHHHHHHHHH
Q psy2758 42 MFQGQGENAVEFASRVKRA 60 (72)
Q Consensus 42 ~~r~~~E~~~eFA~RVk~~ 60 (72)
+.+.++|+|.+|-+|.+++
T Consensus 7 V~Qg~~EsPs~FlerL~ea 25 (32)
T 1bm4_A 7 ITQGPNESPSAFLERLKEA 25 (32)
T ss_dssp TTTTGGGHHHHHHHHHHHH
T ss_pred HHhCCCCChHHHHHHHHHH
Confidence 3567899999999999875
No 2
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=59.62 E-value=8.6 Score=25.48 Aligned_cols=31 Identities=19% Similarity=0.352 Sum_probs=24.8
Q ss_pred eEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 32 IVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 32 ~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
.=++|+|.+. .+..||+.|++.+.+.+|+.+
T Consensus 90 ~G~ev~~~~~-------~s~~lA~~i~~~l~~~~g~~~ 120 (179)
T 1jwq_A 90 NGTETYYQRS-------ASKAFANVMHKYFAPATGLTD 120 (179)
T ss_dssp CCEEEEECSG-------GGHHHHHHHHHHHHHHHCSCE
T ss_pred CeEEEEEECh-------HHHHHHHHHHHHHHHHcCCCC
Confidence 3467888876 578999999999998887654
No 3
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A
Probab=48.47 E-value=12 Score=29.11 Aligned_cols=21 Identities=29% Similarity=0.327 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHHHHHhhCCCc
Q psy2758 48 ENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 48 E~~~eFA~RVk~~IA~~~gl~ 68 (72)
|+|..||+|+-.+|...+|+.
T Consensus 389 ~DP~~f~~ri~~ll~~~L~id 409 (448)
T 3q6m_A 389 EDPQTHANRIYRMIKLGLGID 409 (448)
T ss_dssp SCHHHHHHHHHHHHHHTTC--
T ss_pred CCHHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999875
No 4
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=48.10 E-value=17 Score=19.89 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHhhCCCc
Q psy2758 52 EFASRVKRAISKQGGLV 68 (72)
Q Consensus 52 eFA~RVk~~IA~~~gl~ 68 (72)
+-.++|+++||+.+|+.
T Consensus 7 ~i~~~l~~~l~~~l~~~ 23 (81)
T 1f80_D 7 DTLERVTKIIVDRLGVD 23 (81)
T ss_dssp HHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHHCCC
Confidence 46788999999988874
No 5
>3czx_A Putative N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI, MCSG, protein structure initiative; 1.60A {Neisseria meningitidis MC58}
Probab=48.00 E-value=15 Score=24.33 Aligned_cols=29 Identities=14% Similarity=0.189 Sum_probs=22.7
Q ss_pred EEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 33 VADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 33 V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
=++|+|.|. +..+|+.|++.+.+.+|+.+
T Consensus 89 G~ev~~~~~--------s~~lA~~i~~~l~~~~g~~~ 117 (182)
T 3czx_A 89 GIEALSTPK--------NKRWCQVLGKAVAKKTGWKL 117 (182)
T ss_dssp CBEEEECGG--------GHHHHHHHHHHHHHHHCCCB
T ss_pred EEEEEEeCC--------cHHHHHHHHHHHHHHcCCCc
Confidence 356778752 68999999999988877654
No 6
>2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A {Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A* 2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A
Probab=47.41 E-value=12 Score=25.38 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=19.1
Q ss_pred eCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 39 LPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 39 Lpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
+++.....+|+..+|..||++.+.+
T Consensus 147 ~~~~~~p~gEs~~~~~~Rv~~~l~~ 171 (267)
T 2hhj_A 147 VPLDQLPRSESLKDVLERLLPYWNE 171 (267)
T ss_dssp SCGGGSCSSCCHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHH
Confidence 4444445699999999999997655
No 7
>2z3x_A SAsp, small, acid-soluble spore protein C; alpha/beta-type SAsp, bacillus subtils spore; 2.10A {Bacillus subtilis}
Probab=46.33 E-value=14 Score=21.67 Aligned_cols=20 Identities=20% Similarity=0.144 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhhCCCcc
Q psy2758 50 AVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 50 ~~eFA~RVk~~IA~~~gl~~ 69 (72)
+.+--++.|-+||+++|+.+
T Consensus 8 A~~ald~lK~EiA~ElGv~~ 27 (63)
T 2z3x_A 8 AASAIEQMKLEIASEFGVQL 27 (63)
T ss_dssp GHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHcCCcc
Confidence 34556889999999999975
No 8
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1
Probab=44.96 E-value=16 Score=23.40 Aligned_cols=17 Identities=18% Similarity=0.235 Sum_probs=14.7
Q ss_pred CCCCHHHHHHHHHHHHH
Q psy2758 46 QGENAVEFASRVKRAIS 62 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA 62 (72)
.-|+|.+|++|+-++|.
T Consensus 109 ~leDp~~F~~Ri~~ll~ 125 (126)
T 1sf8_A 109 TLEDPNLFIRRMNQLLV 125 (126)
T ss_dssp CCSSHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHh
Confidence 46899999999998875
No 9
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=44.15 E-value=26 Score=22.08 Aligned_cols=37 Identities=24% Similarity=0.112 Sum_probs=29.7
Q ss_pred ceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 30 WAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 30 W~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
=+..++|.-+.... .|...+|+.++.+.+.+++|+..
T Consensus 77 P~a~v~i~sig~~~---~e~n~~~s~~i~~~l~~~LgI~~ 113 (133)
T 3fwu_A 77 PVACVRVEALGGYG---PSEPEKVTSIVTAAITKECGIVA 113 (133)
T ss_dssp SCEEEEEECTTCCC---TTHHHHHHHHHHHHHHHHHCCCG
T ss_pred CEEEEEEEEcCCCC---HHHHHHHHHHHHHHHHHHhCcCh
Confidence 35677777777644 37889999999999999999864
No 10
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=42.03 E-value=15 Score=23.11 Aligned_cols=25 Identities=20% Similarity=0.163 Sum_probs=22.4
Q ss_pred eCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 39 LPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 39 Lpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
++|..++.++.|.+|..||.++=|.
T Consensus 68 ~~p~~~rg~~~P~~~l~rv~~~~~~ 92 (105)
T 2aje_A 68 ISPQQRRGEPVPQELLNRVLNAHGY 92 (105)
T ss_dssp CCTTTTTCCSCCCHHHHHHHHHHHH
T ss_pred CCcccccCCCCCHHHHHHHHHHHHH
Confidence 6899999999999999999997765
No 11
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=40.90 E-value=29 Score=18.11 Aligned_cols=32 Identities=22% Similarity=0.129 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 34 ADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 34 ~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
++|.-.++ +..|...+|+.++-+++++.+|+.
T Consensus 4 i~i~~~~g---~s~eqk~~l~~~lt~~l~~~lg~~ 35 (64)
T 3abf_A 4 LKVTLLEG---RPPEKKRELVRRLTEMASRLLGEP 35 (64)
T ss_dssp EEEEEETT---CCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEEECCC---CCHHHHHHHHHHHHHHHHHHhCCC
Confidence 45555543 345667889999999999999975
No 12
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=40.22 E-value=44 Score=19.74 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=29.4
Q ss_pred cceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 29 SWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 29 sW~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
.=+.+++|.-++- +..|.-.+|+.++-+.+++.+|+..
T Consensus 55 ~~~~~v~i~~~~g---~t~eqk~~l~~~i~~~l~~~lgi~~ 92 (115)
T 2xcz_A 55 EPTCYVEVKSIGA---LDGSRTQEVSELVCGHIEQNLGIPA 92 (115)
T ss_dssp SSCEEEEEEESSC---CCTTHHHHHHHHHHHHHHHHHCCCG
T ss_pred CcEEEEEEEEecC---CCHHHHHHHHHHHHHHHHHHhCcCc
Confidence 3466778886552 3467788999999999999999864
No 13
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=40.01 E-value=18 Score=23.16 Aligned_cols=21 Identities=29% Similarity=0.581 Sum_probs=17.5
Q ss_pred EEeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 37 WYLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 37 ~yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
-||||++ ..|-++-|+.+|++
T Consensus 15 SyLP~lt------~eqI~kQI~Yll~q 35 (109)
T 1rbl_M 15 SYLPPLS------DRQIAAQIEYMIEQ 35 (109)
T ss_dssp TTSSCCC------HHHHHHHHHHHHHH
T ss_pred ccCCCCC------HHHHHHHHHHHHHC
Confidence 3899886 67889999999987
No 14
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major}
Probab=38.56 E-value=20 Score=27.71 Aligned_cols=24 Identities=29% Similarity=0.344 Sum_probs=19.3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 46 QGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
.-|+|..|++|+-.+|...+|+..
T Consensus 403 ~ledp~~f~~ri~~ll~~~l~~~~ 426 (444)
T 3hjc_A 403 QLEDPTGYAERINRMIKLGLSLDE 426 (444)
T ss_dssp CCSCHHHHHHHHHHHHHHHHC---
T ss_pred CcccHHHHHHHHHHHHHHhcCCCc
Confidence 468999999999999999998753
No 15
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=37.35 E-value=20 Score=22.97 Aligned_cols=21 Identities=43% Similarity=0.672 Sum_probs=17.5
Q ss_pred EEeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 37 WYLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 37 ~yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
-||||++ ..|-++-|+.+|++
T Consensus 17 SyLP~lt------~eqI~kQV~Yll~q 37 (110)
T 1svd_M 17 SYLPPMN------AERIRAQIKYAIAQ 37 (110)
T ss_dssp TTSCCCC------HHHHHHHHHHHHHT
T ss_pred ccCCCCC------HHHHHHHHHHHHHC
Confidence 3789886 67889999999987
No 16
>1xov_A PLY protein, plypsa; alpha/beta hydrolase, multi-domain, hydrolase; 1.80A {Listeria phage psa} SCOP: b.34.11.4 c.56.5.6
Probab=36.20 E-value=24 Score=25.87 Aligned_cols=31 Identities=26% Similarity=0.542 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 34 ADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 34 ~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
++|+|.+. ++.+.++|+.|++.|.+.+|+.+
T Consensus 100 ~evyy~~~-----~~~s~~LA~~I~~~l~~~~g~~~ 130 (326)
T 1xov_A 100 VEVWYYAG-----DEKGRKLAVEISAKMAKALGLPN 130 (326)
T ss_dssp EEEEEETT-----CHHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEEEeCC-----CHHHHHHHHHHHHHHHHHcCCCC
Confidence 56788763 35678999999999998887754
No 17
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=35.84 E-value=25 Score=22.78 Aligned_cols=21 Identities=33% Similarity=0.653 Sum_probs=18.1
Q ss_pred EEeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 37 WYLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 37 ~yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
-||||++ .+|-++-|+.+|++
T Consensus 14 SyLP~Lt------~eqI~kQV~yll~q 34 (118)
T 3zxw_B 14 SYLPPLS------DAQIARQIQYAIDQ 34 (118)
T ss_dssp CCSCCCC------HHHHHHHHHHHHHH
T ss_pred ccCCCCC------HHHHHHHHHHHHhC
Confidence 5899987 77899999999987
No 18
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=35.22 E-value=40 Score=21.21 Aligned_cols=37 Identities=3% Similarity=0.117 Sum_probs=26.7
Q ss_pred ceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 30 WAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 30 W~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
=+..++|.-+... ..|...+++.++-+.+++++|+..
T Consensus 77 p~a~v~i~sig~~---t~e~n~~~s~~i~~~l~~~Lgi~~ 113 (135)
T 3t5s_A 77 LCCFVDFYCIGVI---SQAKNPSISAAITGCLTQHFKVKP 113 (135)
T ss_dssp SCEEEEEECCC--------CCHHHHHHHHHHHHHHHCCCG
T ss_pred eEEEEEEEEEEEE---eccCCchHHHHHHHHHHHhcccCc
Confidence 3567778777764 356778999999999999999864
No 19
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=34.81 E-value=48 Score=19.53 Aligned_cols=37 Identities=24% Similarity=0.150 Sum_probs=28.5
Q ss_pred ceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 30 WAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 30 W~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
=+.+++|.-.+.. ..|...+|+.++-+.+++.+|+..
T Consensus 56 ~~~~i~i~~~~g~---~~eqk~~l~~~i~~~l~~~lgi~~ 92 (112)
T 3b64_A 56 PVACVRVEALGGY---GPSEPEKVTSIVTAAITKECGIVA 92 (112)
T ss_dssp SCEEEEEECTTCC---CTTHHHHHHHHHHHHHHHHHCCCG
T ss_pred CEEEEEEEEcCCC---CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 3567778755532 367788999999999999999864
No 20
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae}
Probab=34.16 E-value=26 Score=26.50 Aligned_cols=21 Identities=33% Similarity=0.362 Sum_probs=17.7
Q ss_pred CCCCHHHHHHHHHHHHHhhCC
Q psy2758 46 QGENAVEFASRVKRAISKQGG 66 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~~~g 66 (72)
.-|+|.+|++|+-.+|...+|
T Consensus 385 ~~~dp~~f~~r~~~ll~~~l~ 405 (405)
T 2cge_A 385 SLDEPTSFASRINRLISLGLN 405 (405)
T ss_dssp CCSCHHHHHHHHHHHHHHHHC
T ss_pred CcccHHHHHHHHHHHHHHhcC
Confidence 468999999999999987654
No 21
>2z5b_A Protein YPL144W, DMP1; proteasome, chaperone; 1.96A {Saccharomyces cerevisiae} PDB: 2z5c_A
Probab=34.13 E-value=16 Score=24.87 Aligned_cols=23 Identities=13% Similarity=0.135 Sum_probs=20.0
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 46 QGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.++.-.|||.|+-++||++-++.
T Consensus 92 ~~~~~~D~a~rlAkiLarR~~~P 114 (151)
T 2z5b_A 92 KDDRIRDMARHMATIISERFNRP 114 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCccHHHHHHHHHHHHHHHhCCC
Confidence 37788999999999999998764
No 22
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=34.06 E-value=32 Score=21.90 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=25.8
Q ss_pred HHHHhhcce-----eEEEEEEeCCcc------------CCCCCCHHHHHHHHHHHH
Q psy2758 23 LYMMMTSWA-----IVADVWYLPPMF------------QGQGENAVEFASRVKRAI 61 (72)
Q Consensus 23 l~~lMTsW~-----~V~dV~yLpp~~------------r~~~E~~~eFA~RVk~~I 61 (72)
+-|++.+.. .++++.|.||-. .+.+++...|.+|++.-.
T Consensus 117 ~~R~~~R~~~~~~g~~~~~~~~pp~~~~~~~~~~~~l~~r~dd~~~~~~~rl~~y~ 172 (214)
T 1e4v_A 117 VDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYH 172 (214)
T ss_dssp HHHHHTEEEETTTTEEEETTTBCCSSTTBCTTTCCBCBCCTTCSHHHHHHHHHHHH
T ss_pred HHHHHCCcccCCcCCcccccCCCCCccccccccccccccCCCCCHHHHHHHHHHHH
Confidence 445555542 357788888853 245667889999997643
No 23
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=33.89 E-value=34 Score=20.44 Aligned_cols=25 Identities=16% Similarity=0.142 Sum_probs=21.8
Q ss_pred eCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 39 LPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 39 Lpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
++|..++..+.|.++..||..+=|.
T Consensus 55 ~~p~~~~~~~~p~~~~~rv~~~~a~ 79 (83)
T 2ckx_A 55 IAPQQRRGEPVPQDLLDRVLAAHAY 79 (83)
T ss_dssp SCGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCHHHHHHHHHHHHH
Confidence 5898888999999999999887664
No 24
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=33.75 E-value=28 Score=28.13 Aligned_cols=23 Identities=9% Similarity=0.151 Sum_probs=19.9
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 46 QGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.-|+|..|++|+-.+|...+|+.
T Consensus 640 ~~~dp~~f~~r~~~ll~~~l~~~ 662 (666)
T 2o1u_A 640 LLPDTKAYGDRIERMLRLSLNID 662 (666)
T ss_dssp CCSCHHHHHHHHHHHHHTTSCC-
T ss_pred CcccHHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999988875
No 25
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=33.33 E-value=61 Score=19.60 Aligned_cols=37 Identities=8% Similarity=0.055 Sum_probs=26.7
Q ss_pred ceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 30 WAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 30 W~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
=+.+++|.-++.. ..|...+|+.++-+.+++.+|+..
T Consensus 56 p~~~v~I~~~~g~---t~eqk~~l~~~i~~~l~~~lgi~~ 92 (125)
T 2wkb_A 56 GYCFVRLTSIGGI---NRSNNSLLADKITKILSNHLSVKP 92 (125)
T ss_dssp SCEEEEEECC--------CTHHHHHHHHHHHHHHHHCCCG
T ss_pred CcEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 3567778765533 467889999999999999999864
No 26
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=33.23 E-value=47 Score=20.08 Aligned_cols=31 Identities=26% Similarity=0.208 Sum_probs=23.9
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
..|-||--..+++|++.+=|.| ++.++.||.
T Consensus 55 g~w~lPgG~ve~gE~~~~aa~R---El~EEtGl~ 85 (165)
T 3oga_A 55 GQWALSGGGVEPGERIEEALRR---EIREELGEQ 85 (165)
T ss_dssp CCEECCCEECCTTCCHHHHHHH---HHHHHHCSS
T ss_pred CeEECCccccCCCCCHHHHHHH---HHHHHhCCC
Confidence 3577888888999999987764 566777765
No 27
>1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.40A {Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A 2enw_A ...
Probab=31.87 E-value=37 Score=21.49 Aligned_cols=19 Identities=32% Similarity=0.394 Sum_probs=16.6
Q ss_pred CCCCHHHHHHHHHHHHHhh
Q psy2758 46 QGENAVEFASRVKRAISKQ 64 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~~ 64 (72)
.+|+..+|.+||++.+.+-
T Consensus 106 ~gEs~~~~~~R~~~~l~~l 124 (177)
T 1v37_A 106 GGESLSAFQERVFRFLEGL 124 (177)
T ss_dssp TSCCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHc
Confidence 4899999999999988763
No 28
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=31.59 E-value=44 Score=19.80 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=23.3
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-||=-..+++|++.+=|.| ++.++.|+.
T Consensus 45 ~w~~PgG~ve~gE~~~~aa~R---El~EEtGl~ 74 (160)
T 1rya_A 45 YWFVPGGRVQKDETLEAAFER---LTMAELGLR 74 (160)
T ss_dssp SEECCEEECCTTCCHHHHHHH---HHHHHHSSC
T ss_pred EEECCccccCCCCCHHHHHHH---HHHHHHCCC
Confidence 466887788999998877665 777888875
No 29
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=31.46 E-value=37 Score=19.95 Aligned_cols=37 Identities=5% Similarity=0.096 Sum_probs=27.9
Q ss_pred ceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 30 WAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 30 W~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
=+.+++|.-++.. ..|...+|+.++-+.+++.+|+..
T Consensus 55 ~~~~i~i~~~~g~---~~eqk~~l~~~i~~~l~~~lgi~~ 91 (113)
T 1hfo_A 55 PAAFGTLMSIGGI---EPSRNRDHSAKLFDHLNTKLGIPK 91 (113)
T ss_dssp SCEEEEEEESSSC---SHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CeEEEEEEEecCC---CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 3567778765533 356667899999999999999864
No 30
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A
Probab=31.45 E-value=42 Score=22.41 Aligned_cols=19 Identities=11% Similarity=0.197 Sum_probs=16.6
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..+|..||++.+.+
T Consensus 167 p~gEs~~~~~~R~~~~l~~ 185 (273)
T 3d4i_A 167 MPAESYDQYVERCAVSMGQ 185 (273)
T ss_dssp CTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 4589999999999988866
No 31
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus}
Probab=31.44 E-value=38 Score=22.04 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=16.0
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..+|.+||++.+.+
T Consensus 117 p~gEs~~~~~~R~~~~l~~ 135 (213)
T 3hjg_A 117 PNAESLSTFSQRVSRAWSQ 135 (213)
T ss_dssp TTCCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 3589999999999987654
No 32
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A
Probab=31.20 E-value=48 Score=22.05 Aligned_cols=19 Identities=11% Similarity=0.111 Sum_probs=16.1
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..+|..||+..+.+
T Consensus 158 p~gEs~~~~~~R~~~~l~~ 176 (264)
T 3mbk_A 158 AISESYDTYINRSFQVTKE 176 (264)
T ss_dssp CTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 4699999999999987654
No 33
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori}
Probab=31.11 E-value=38 Score=22.57 Aligned_cols=18 Identities=28% Similarity=0.278 Sum_probs=15.9
Q ss_pred CCCCHHHHHHHHHHHHHh
Q psy2758 46 QGENAVEFASRVKRAISK 63 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~ 63 (72)
.+|+..+|..||++.+.+
T Consensus 158 ~gEs~~~~~~Rv~~~l~~ 175 (263)
T 3c7t_A 158 SAETMDEFFKRGEVAMQA 175 (263)
T ss_dssp SCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 589999999999988765
No 34
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=30.88 E-value=40 Score=21.47 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=21.0
Q ss_pred eEEEEEEeCCcc------------CCCCCCHHHHHHHHHHHHHh
Q psy2758 32 IVADVWYLPPMF------------QGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 32 ~V~dV~yLpp~~------------r~~~E~~~eFA~RVk~~IA~ 63 (72)
.++++.|.||.. .+.+++...|.+|++...+.
T Consensus 140 ~~y~~~~~pp~~~~~d~~~~~~l~~r~dd~~~~~~~rl~~~~~~ 183 (220)
T 1aky_A 140 RSYHKIFNPPKEDMKDDVTGEALVQRSDDNADALKKRLAAYHAQ 183 (220)
T ss_dssp CEEETTTBCCSSTTBCTTTCCBCBCCTTCSHHHHHHHHHHHHHH
T ss_pred CccccccCCCcccccccccccccccCCCCCHHHHHHHHHHHHHH
Confidence 356666777754 24456788899998765443
No 35
>3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyceromutase, decode, SBRI, niaid, UWPPG, glycolysis isomerase; HET: PG4 SEP; 1.50A {Burkholderia pseudomallei} SCOP: c.60.1.1 PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A* 3lnt_A
Probab=30.87 E-value=48 Score=21.88 Aligned_cols=19 Identities=16% Similarity=0.011 Sum_probs=16.3
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+-.+|..||++.+.+
T Consensus 155 p~gEs~~~~~~Rv~~~l~~ 173 (257)
T 3gp3_A 155 PLTECLKDTVARVLPLWNE 173 (257)
T ss_dssp CSSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 3589999999999998765
No 36
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=30.48 E-value=44 Score=17.18 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 34 ADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 34 ~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
++|..++.. ..|.-.++++++-+++++.+|+..
T Consensus 3 i~i~~~~gr---s~eqk~~l~~~i~~~l~~~lg~~~ 35 (61)
T 2opa_A 3 VTVKMLEGR---TDEQKRNLVEKVTEAVKETTGASE 35 (61)
T ss_dssp EEEEEESCC---CHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred EEEEEcCCC---CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 345444432 456677899999999999998753
No 37
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A*
Probab=30.47 E-value=38 Score=22.68 Aligned_cols=19 Identities=32% Similarity=0.567 Sum_probs=16.4
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..+|..||++.|.+
T Consensus 136 p~gEs~~~~~~R~~~~l~~ 154 (265)
T 3f3k_A 136 ENGETTQQIGLRLSRAIAR 154 (265)
T ss_dssp TTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 3589999999999998865
No 38
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=29.91 E-value=41 Score=19.50 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=22.4
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-+|--..+++|++.+=|.| ++.++.||.
T Consensus 35 ~w~~PgG~ve~gE~~~~aa~R---E~~EEtGl~ 64 (150)
T 2o1c_A 35 FWQSVTGSVEEGETAPQAAMR---EVKEEVTID 64 (150)
T ss_dssp CEESEEEECCTTCCHHHHHHH---HHHHHHCCC
T ss_pred ceECCccccCCCCCHHHHHHH---HHHHHhCCC
Confidence 466777788899999887665 666777764
No 39
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=29.72 E-value=40 Score=19.89 Aligned_cols=38 Identities=11% Similarity=0.125 Sum_probs=28.2
Q ss_pred cceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 29 SWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 29 sW~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
.=+.+++|.-++-. ..|...+|+.++-+.+++.+|+..
T Consensus 55 ~~~~~v~i~~~~g~---~~eqk~~l~~~i~~~l~~~lgi~~ 92 (115)
T 1uiz_A 55 DPCAVCSLCSIGKI---GGPQNKSYTKLLCDILTKQLNIPA 92 (115)
T ss_dssp SSCEEEEEEESSCC---SHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCeEEEEEEEecCC---CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 34567777765522 356667899999999999999864
No 40
>1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET: 3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1 PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A*
Probab=29.66 E-value=53 Score=21.43 Aligned_cols=19 Identities=11% Similarity=-0.004 Sum_probs=16.0
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..+|..||++.+.+
T Consensus 146 p~gEs~~~~~~R~~~~l~~ 164 (240)
T 1qhf_A 146 PETESLALVIDRLLPYWQD 164 (240)
T ss_dssp CSSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 4699999999999986654
No 41
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=29.61 E-value=32 Score=22.94 Aligned_cols=21 Identities=10% Similarity=0.368 Sum_probs=17.6
Q ss_pred EEeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 37 WYLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 37 ~yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
-||||++ ..|-++-|+.+|++
T Consensus 9 SyLP~lt------deqI~kQI~YlL~q 29 (139)
T 1bxn_I 9 SFLPELT------DEQITKQLEYCLNQ 29 (139)
T ss_dssp TTSSCCC------HHHHHHHHHHHHHH
T ss_pred ccCCCCC------HHHHHHHHHHHHHC
Confidence 3899986 67889999999987
No 42
>1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia coli} SCOP: c.60.1.1 PDB: 1e59_A*
Probab=29.56 E-value=56 Score=21.43 Aligned_cols=19 Identities=16% Similarity=-0.050 Sum_probs=16.1
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..+|..||++.+.+
T Consensus 148 p~gEs~~~~~~Rv~~~l~~ 166 (249)
T 1e58_A 148 PLTESLALTIDRVIPYWNE 166 (249)
T ss_dssp CSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 4699999999999987654
No 43
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI, structure initiative; 2.20A {Mycobacterium tuberculosis}
Probab=29.46 E-value=42 Score=21.74 Aligned_cols=19 Identities=21% Similarity=0.372 Sum_probs=15.8
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..+|.+||++.+.+
T Consensus 119 p~gEs~~~~~~R~~~~l~~ 137 (208)
T 2a6p_A 119 PAGESVAQVNDRADSAVAL 137 (208)
T ss_dssp TTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 3589999999999887654
No 44
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=29.43 E-value=39 Score=19.70 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=23.8
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
+.|-+|--..+++|++.+=|.| ++.++.|+.
T Consensus 41 g~w~~PgG~ve~gE~~~~aa~R---E~~EEtGl~ 71 (148)
T 2azw_A 41 GAYFLPGGEIEGTETKEEAIHR---EVLEELGIS 71 (148)
T ss_dssp SCEECSEEECCTTCCHHHHHHH---HHHHHHSEE
T ss_pred CCEeCCCcccCCCCCHHHHHHH---HHHHHhCCe
Confidence 3566888888999999887765 677777764
No 45
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=29.33 E-value=52 Score=19.58 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=22.8
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-+|--..+++|++.+=|.| ++.++.||.
T Consensus 37 ~w~~PgG~ve~gE~~~~aa~R---El~EE~Gl~ 66 (153)
T 3grn_A 37 KWDLPGGKVNPDESLKEGVAR---EVWEETGIT 66 (153)
T ss_dssp CEECSEEECCTTCCHHHHHHH---HHHHHHCCC
T ss_pred eEECceeecCCCCCHHHHHHh---hhhhhhCcE
Confidence 466787777899999988775 666777765
No 46
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A
Probab=29.11 E-value=41 Score=21.66 Aligned_cols=18 Identities=22% Similarity=0.398 Sum_probs=15.4
Q ss_pred CCCCHHHHHHHHHHHHHh
Q psy2758 46 QGENAVEFASRVKRAISK 63 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~ 63 (72)
.+|+..+|..||++.+.+
T Consensus 118 ~gEs~~~~~~R~~~~l~~ 135 (207)
T 1h2e_A 118 RGERFCDVQQRALEAVQS 135 (207)
T ss_dssp SSCCHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHH
Confidence 589999999998887754
No 47
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=29.03 E-value=48 Score=19.33 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=22.4
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-||--..+++|++.+=|.| ++.++.|+.
T Consensus 49 ~w~~PgG~ve~gE~~~~aa~R---E~~EE~Gl~ 78 (153)
T 3ees_A 49 QWEFPGGKIENGETPEEALAR---ELNEELGIE 78 (153)
T ss_dssp CEECSEEECCTTCCHHHHHHH---HHHHHHSCE
T ss_pred eEECCceeeCCCCCHHHHHHH---HHHHHHCCc
Confidence 466777777889999998876 566666764
No 48
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=28.95 E-value=32 Score=21.68 Aligned_cols=19 Identities=11% Similarity=0.092 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHhhCCCcc
Q psy2758 51 VEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 51 ~eFA~RVk~~IA~~~gl~~ 69 (72)
.+--.||+++||+++|+..
T Consensus 13 ~~I~~~V~~ilaE~lev~~ 31 (102)
T 2l9f_A 13 TGALELVRHLVAERAELPV 31 (102)
T ss_dssp CCHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHHHCCCH
Confidence 3556899999999999863
No 49
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=28.82 E-value=32 Score=22.90 Aligned_cols=20 Identities=25% Similarity=0.481 Sum_probs=17.2
Q ss_pred EeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 38 YLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 38 yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
||||++ ..|-++-|+.+|++
T Consensus 10 yLP~lt------deqI~kQI~Yll~q 29 (138)
T 1bwv_S 10 FLPDLT------DEQIKKQIDYMISK 29 (138)
T ss_dssp TSCCCC------HHHHHHHHHHHHHT
T ss_pred cCCCCC------HHHHHHHHHHHHHC
Confidence 899986 67889999999987
No 50
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=28.63 E-value=54 Score=18.55 Aligned_cols=31 Identities=26% Similarity=0.441 Sum_probs=23.5
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
+.|-+|--..+++|++.+=|.| ++.++.|+.
T Consensus 24 g~w~~PgG~ve~gE~~~~aa~R---E~~EE~Gl~ 54 (126)
T 1vcd_A 24 GFWVFPKGHPEPGESLEEAAVR---EVWEETGVR 54 (126)
T ss_dssp SCEECCEECCCTTCCHHHHHHH---HHHHHHCCE
T ss_pred CCccCCcCcCCCCCCHHHHHHH---HHHHhhCcE
Confidence 3467888888999999877665 677777764
No 51
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=28.61 E-value=51 Score=20.60 Aligned_cols=37 Identities=19% Similarity=0.118 Sum_probs=28.6
Q ss_pred ceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 30 WAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 30 W~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
=+..++|.-+... ..|...+|+.++.+.+.+++|+..
T Consensus 77 P~a~v~v~sig~~---~~e~n~~~s~~i~~~l~~~LgI~~ 113 (133)
T 3fwt_A 77 PAAYVRVESWGEY---APSKPKMMTPRIAAAITKECGIPA 113 (133)
T ss_dssp SCEEEEEEEEECC---CTHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CeEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHhCcCh
Confidence 3566777766543 457788999999999999999864
No 52
>3r7a_A Phosphoglycerate mutase, putative; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE EPE; 1.84A {Bacillus anthracis}
Probab=28.49 E-value=45 Score=21.67 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=16.1
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..+|.+||++.+.+
T Consensus 146 ~~gEs~~~~~~R~~~~l~~ 164 (237)
T 3r7a_A 146 KQAEDWELFSTRIKAEIDK 164 (237)
T ss_dssp CCSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 3589999999999987754
No 53
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=28.07 E-value=44 Score=19.94 Aligned_cols=37 Identities=8% Similarity=0.095 Sum_probs=27.9
Q ss_pred ceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 30 WAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 30 W~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
=+.+++|.-++.. ..|...+|+.++-+.+++.+|+..
T Consensus 56 ~~~~i~I~~~~g~---~~eqk~~l~~~i~~~l~~~lgi~~ 92 (119)
T 2os5_A 56 PVAVIKVESIGAL---SADDNIRHTQKITQFCQDTLKLPK 92 (119)
T ss_dssp SCEEEEEEESSCC---CHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CeEEEEEEEecCC---CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 3566778766533 356677899999999999999864
No 54
>2i9o_A MHB8A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=28.00 E-value=46 Score=17.56 Aligned_cols=17 Identities=35% Similarity=0.620 Sum_probs=14.0
Q ss_pred CCCHHHHHHHHHHHHHh
Q psy2758 47 GENAVEFASRVKRAISK 63 (72)
Q Consensus 47 ~E~~~eFA~RVk~~IA~ 63 (72)
+..++.+|+|+-.++|+
T Consensus 20 gsaaeayakriaeamak 36 (37)
T 2i9o_A 20 GSAAEAYAKRIAEAMAK 36 (37)
T ss_dssp CSSHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHhc
Confidence 45678899999999885
No 55
>1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR {Schizosaccharomyces pombe} SCOP: c.60.1.1
Probab=27.91 E-value=48 Score=21.26 Aligned_cols=18 Identities=28% Similarity=0.268 Sum_probs=15.8
Q ss_pred CCCCHHHHHHHHHHHHHh
Q psy2758 46 QGENAVEFASRVKRAISK 63 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~ 63 (72)
.+|+..+|..||++.+.+
T Consensus 129 ~gEs~~~~~~R~~~~l~~ 146 (211)
T 1fzt_A 129 NGESLKDTAERVLPYYKS 146 (211)
T ss_dssp TCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 589999999999987765
No 56
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=27.47 E-value=35 Score=22.76 Aligned_cols=20 Identities=25% Similarity=0.481 Sum_probs=17.2
Q ss_pred EeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 38 YLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 38 yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
||||++ ..|-++-|+.+|++
T Consensus 10 yLP~lt------d~qI~kQI~YlL~q 29 (138)
T 4f0h_B 10 FLPDLT------DEQIKKQIDYMISK 29 (138)
T ss_dssp TSCCCC------HHHHHHHHHHHHHT
T ss_pred cCCCCC------HHHHHHHHHHHHhC
Confidence 899986 66889999999987
No 57
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=27.43 E-value=13 Score=24.09 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=19.8
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCccC
Q psy2758 46 QGENAVEFASRVKRAISKQGGLVDL 70 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~~~gl~~l 70 (72)
+.|.-.+.++|+++.++..++.+.|
T Consensus 118 ~~eel~~~a~kIr~~L~~~~~~~~~ 142 (149)
T 3i24_A 118 AQSSQTQLVDLLRDKLSNISGFKRL 142 (149)
T ss_dssp CHHHHHHHHHHHHHHHTTSTTCEEC
T ss_pred CHHHHHHHHHHHHHHHHhccchhhh
Confidence 3466778999999999988887655
No 58
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=27.20 E-value=76 Score=18.69 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=24.0
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
..|-||--..++||++.+=|.| ++.++.|+.
T Consensus 29 ~~w~~PgG~ve~gEs~~~aa~R---El~EEtGl~ 59 (153)
T 3shd_A 29 ALWNQPAGHLEADETLVEAAAR---ELWEETGIS 59 (153)
T ss_dssp EEEECSEEECCTTCCHHHHHHH---HHHHHHCCC
T ss_pred CCEECCeEEeCCCCCHHHHHHH---HHHHHHCcc
Confidence 4577888888999999988775 566677765
No 59
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=27.12 E-value=54 Score=16.82 Aligned_cols=24 Identities=13% Similarity=0.059 Sum_probs=19.9
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 46 QGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
..|.-.++++++-+++++.+|+..
T Consensus 12 s~e~k~~l~~~i~~~l~~~lg~p~ 35 (62)
T 1otf_A 12 TDEQKETLIRQVSEAMANSLDAPL 35 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 456677899999999999998863
No 60
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=27.10 E-value=58 Score=19.25 Aligned_cols=31 Identities=29% Similarity=0.501 Sum_probs=24.0
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
..|-+|--..+++|++.+=|.| ++.++.|+.
T Consensus 43 ~~w~~PgG~ve~gE~~~~aa~R---E~~EEtGl~ 73 (159)
T 1sjy_A 43 GLWHIPSGAVEDGENPQDAAVR---EACEETGLR 73 (159)
T ss_dssp CCEECSEEECCTTSCHHHHHHH---HHHHHHSCC
T ss_pred CeEECCccccCCCCCHHHHHHH---HHHHHHCcc
Confidence 3567887788999999887775 777777775
No 61
>4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.30A {Borrelia burgdorferi}
Probab=26.21 E-value=65 Score=21.61 Aligned_cols=20 Identities=15% Similarity=-0.004 Sum_probs=16.5
Q ss_pred CCCCCCHHHHHHHHHHHHHh
Q psy2758 44 QGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 44 r~~~E~~~eFA~RVk~~IA~ 63 (72)
...+|+-.+|..||++.+.+
T Consensus 172 ~p~gEs~~~~~~Rv~~~l~~ 191 (274)
T 4emb_A 172 LPSTECLKDTVARVIPYWTD 191 (274)
T ss_dssp SCSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHH
Confidence 34689999999999987654
No 62
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=26.06 E-value=59 Score=16.46 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=19.3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 46 QGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
..|...++++.+-+++++.+|+.
T Consensus 15 s~e~k~~l~~~l~~~l~~~lg~p 37 (63)
T 2x4k_A 15 SDEQLKNLVSEVTDAVEKTTGAN 37 (63)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHHHHHHhCcC
Confidence 45667789999999999998875
No 63
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=26.04 E-value=26 Score=23.30 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=28.3
Q ss_pred HHHHhhcce-----eEEEEEEeCCcc------------CCCCCCHHHHHHHHHHHHHh
Q psy2758 23 LYMMMTSWA-----IVADVWYLPPMF------------QGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 23 l~~lMTsW~-----~V~dV~yLpp~~------------r~~~E~~~eFA~RVk~~IA~ 63 (72)
+=|++.+.. .+|++.|.||.. .+++++.+.+.+|++..-.+
T Consensus 150 ~~Rl~~R~~~~~~g~~y~~~~~pp~~~~~~~~~~~~l~~r~dd~~e~i~~Rl~~~~~~ 207 (243)
T 3tlx_A 150 VNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEPLIQREDDNEDVLKKRLTVFKSE 207 (243)
T ss_dssp HHHHHTEEEETTTTEEEETTTBCCSSTTBCTTTCCBCBCCGGGSHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCcccCcccccccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHH
Confidence 445665552 467777888853 46678999999999875443
No 64
>3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural genomics, medical STRU genomics of pathogenic protozoa, MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB: 1xq9_A
Probab=25.51 E-value=70 Score=21.01 Aligned_cols=19 Identities=16% Similarity=-0.118 Sum_probs=16.2
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+-.+|..||++.+.+
T Consensus 157 p~gEs~~~~~~Rv~~~l~~ 175 (258)
T 3kkk_A 157 PFTECLKDTVERVLPFWFD 175 (258)
T ss_dssp CSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 4589999999999987654
No 65
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str}
Probab=25.43 E-value=52 Score=21.75 Aligned_cols=18 Identities=22% Similarity=0.324 Sum_probs=15.8
Q ss_pred CCCCHHHHHHHHHHHHHh
Q psy2758 46 QGENAVEFASRVKRAISK 63 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~ 63 (72)
.+|+..+|..||++.+.+
T Consensus 130 ~gEs~~~~~~Rv~~~l~~ 147 (219)
T 2qni_A 130 GWERAIDAQARIVEAVKA 147 (219)
T ss_dssp TCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 589999999999988765
No 66
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=25.40 E-value=60 Score=19.22 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=28.6
Q ss_pred ceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 30 WAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 30 W~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
=+.+++|.-+.-.+ .|...+++..+-+.+.+++|+..
T Consensus 56 p~a~v~i~~ig~~~---~e~~~~l~~~i~~~l~~~Lgi~~ 92 (114)
T 4dh4_A 56 PCAFIRVASIGGIT---SSTNCKIAAALSAACERHLGVPK 92 (114)
T ss_dssp CCEEEEEEEESCCC---HHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CeEEEEEEEEcCCC---HHHHHHHHHHHHHHHHHHhCcCc
Confidence 35667777777433 37778999999999999999864
No 67
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=25.13 E-value=41 Score=22.45 Aligned_cols=20 Identities=30% Similarity=0.657 Sum_probs=16.6
Q ss_pred EeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 38 YLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 38 yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
||||++ ..|-++-|+.+|++
T Consensus 17 yLP~lt------~eqI~kQI~YlL~q 36 (140)
T 1gk8_I 17 YLPPLT------DEQIAAQVDYIVAN 36 (140)
T ss_dssp TSSCCC------HHHHHHHHHHHHHT
T ss_pred cCCCCC------HHHHHHHHHHHHHC
Confidence 788886 66888999999976
No 68
>2i9n_A MHB4A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=25.10 E-value=40 Score=17.41 Aligned_cols=17 Identities=35% Similarity=0.620 Sum_probs=13.8
Q ss_pred CCCHHHHHHHHHHHHHh
Q psy2758 47 GENAVEFASRVKRAISK 63 (72)
Q Consensus 47 ~E~~~eFA~RVk~~IA~ 63 (72)
+..++.+|+|+-.++|+
T Consensus 16 gsaaeayakriaeamak 32 (33)
T 2i9n_A 16 GSAAEAYAKRIAEAMAK 32 (33)
T ss_dssp CCSTHHHHHHHHHHHCC
T ss_pred chHHHHHHHHHHHHHhC
Confidence 45678899999998875
No 69
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=25.03 E-value=50 Score=19.62 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=23.4
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
+.|.||--..+++|++.+=|. .++.++.|+.
T Consensus 39 ~~w~lPgG~ve~gE~~~~aa~---REl~EEtGl~ 69 (154)
T 2pqv_A 39 GKYYTIGGAIQVNESTEDAVV---REVKEELGVK 69 (154)
T ss_dssp TEEECEEEECBTTCCHHHHHH---HHHHHHHCCC
T ss_pred CeEECcccCcCCCCCHHHHHH---HHHHHHhCCe
Confidence 357788888899999887665 5667777764
No 70
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=24.95 E-value=42 Score=22.03 Aligned_cols=20 Identities=20% Similarity=0.582 Sum_probs=16.7
Q ss_pred EeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 38 YLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 38 yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
||||++ .+|-++-|+.+|++
T Consensus 17 yLP~lt------~eqI~kQI~Yll~q 36 (128)
T 1wdd_S 17 YLPPLT------VEDLLKQIEYLLRS 36 (128)
T ss_dssp TSSCCC------HHHHHHHHHHHHHT
T ss_pred cCCCCC------HHHHHHHHHHHHHC
Confidence 788886 66888899999987
No 71
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=24.31 E-value=65 Score=22.65 Aligned_cols=29 Identities=31% Similarity=0.381 Sum_probs=23.3
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCC
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGL 67 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl 67 (72)
.|.||=-+.+++|++++ -++.+|++++|+
T Consensus 84 ~f~LPGGkle~gE~~~e---aL~REL~EELg~ 112 (208)
T 3bho_A 84 FFKLPGGELNPGEDEVE---GLKRLMTEILGR 112 (208)
T ss_dssp EEECSEEECCTTCCHHH---HHHHHHHHHHCC
T ss_pred cEECCCcccCCCCCHHH---HHHHHHHHHhCC
Confidence 48899999999999987 345677777775
No 72
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=24.24 E-value=75 Score=18.56 Aligned_cols=30 Identities=23% Similarity=0.212 Sum_probs=22.8
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-||--..+++|++.+=|.| ++.++.|+.
T Consensus 35 ~w~lPgG~ve~gE~~~~aa~R---El~EE~Gl~ 64 (140)
T 3gwy_A 35 RYEFPGGKVEEGESLQEALQR---EIMEEMDYV 64 (140)
T ss_dssp CEECSEEECCTTCCHHHHHHH---HHHHHHCCC
T ss_pred eEECCCccCCCCCCHHHHHHH---HHHHhhCcE
Confidence 467887788899999988775 566667764
No 73
>4esw_A Pyrimidine biosynthesis enzyme THI13; thiamin pyrimidine biosynthesis, transferase; HET: CIT; 1.60A {Candida albicans} PDB: 4esx_A*
Probab=24.18 E-value=94 Score=21.13 Aligned_cols=35 Identities=14% Similarity=0.073 Sum_probs=25.1
Q ss_pred EEeCCccCCCCCCHHHHHHH---HHHHHHhhCCCccCC
Q psy2758 37 WYLPPMFQGQGENAVEFASR---VKRAISKQGGLVDLM 71 (72)
Q Consensus 37 ~yLpp~~r~~~E~~~eFA~R---Vk~~IA~~~gl~~l~ 71 (72)
.||......+-.+|.+-.+| +|+.+|.++|.+.|.
T Consensus 303 efl~~~~~~~~~dp~~~~~~~~~~q~~~~~~~~~~~~~ 340 (342)
T 4esw_A 303 EYLSWPEPKEVDDPEKAQDLMLKHQEECKTCGGYKRLV 340 (342)
T ss_dssp TTCCSCCCCCCSCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred hhhCccccccccChHHHHHHHHHHHHHHHhcCCceecc
Confidence 46665555556667765555 899999999988763
No 74
>3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria, glycolysis, I structural genomics consortium, SGC; 2.01A {Cryptosporidium parvum}
Probab=24.09 E-value=76 Score=21.32 Aligned_cols=19 Identities=21% Similarity=0.123 Sum_probs=16.0
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+-.+|.+||++.+.+
T Consensus 166 p~gEs~~~~~~Rv~~~l~~ 184 (267)
T 3d8h_A 166 PTTECLKDTVERVKPYFED 184 (267)
T ss_dssp CSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 4699999999999987654
No 75
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=24.04 E-value=72 Score=18.31 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=22.7
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-||--..+++|++.+=|.| ++.++.|+.
T Consensus 36 ~w~lPgG~ve~gE~~~~aa~R---E~~EE~Gl~ 65 (140)
T 2rrk_A 36 LWEFAGGKVEPDESQRQALVR---ELREELGIE 65 (140)
T ss_dssp CEECCEEECCTTSCHHHHHHH---HHHHHSCEE
T ss_pred EEECCceecCCCCCHHHHHHH---HHHHHHCCe
Confidence 566777777889999887765 667777775
No 76
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=24.00 E-value=63 Score=20.59 Aligned_cols=20 Identities=20% Similarity=0.345 Sum_probs=17.3
Q ss_pred CCCCCHHHHHHHHHHHHHhh
Q psy2758 45 GQGENAVEFASRVKRAISKQ 64 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~~ 64 (72)
.+++++.+|.++++++|++-
T Consensus 38 ~~~~~~~~~~~~i~~~i~~~ 57 (144)
T 3lfh_A 38 NLGDNIEVVRKEVEKIIKEK 57 (144)
T ss_dssp CTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHh
Confidence 45889999999999999864
No 77
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=23.85 E-value=82 Score=16.92 Aligned_cols=19 Identities=5% Similarity=0.032 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHhhCCCc
Q psy2758 50 AVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 50 ~~eFA~RVk~~IA~~~gl~ 68 (72)
..+-..+|+++||+.+|+.
T Consensus 4 ~~~i~~~l~~ii~~~l~~~ 22 (81)
T 2lol_A 4 TDKIEQKVIEMVAEKLNKD 22 (81)
T ss_dssp HHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHCCC
Confidence 4567789999999999874
No 78
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=23.58 E-value=74 Score=19.25 Aligned_cols=30 Identities=30% Similarity=0.390 Sum_probs=22.7
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-+|--..+++|++.+=|.| ++.++.|+.
T Consensus 47 ~w~~PgG~ve~gEs~~~aa~R---El~EEtGl~ 76 (171)
T 3id9_A 47 DWSLPGGRVENGETLEEAMIR---EMREETGLE 76 (171)
T ss_dssp CEECCEEECCTTCCHHHHHHH---HHHHHHCCC
T ss_pred eEECCCccCCCCCCHHHHHHH---HHHHHHCCc
Confidence 466777778899999988775 566677764
No 79
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=23.36 E-value=56 Score=20.19 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=16.8
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
.+++++.+|.++++++|.+
T Consensus 36 ~~~~~~~~~~~~i~~~i~~ 54 (135)
T 1pdo_A 36 VPGENAETLIEKYNAQLAK 54 (135)
T ss_dssp CTTCCHHHHHHHHHHHHTT
T ss_pred eCCCCHHHHHHHHHHHHHh
Confidence 4589999999999999976
No 80
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=23.07 E-value=65 Score=18.98 Aligned_cols=31 Identities=26% Similarity=0.187 Sum_probs=23.0
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
..|-+|--..++||++.+=|.| ++.++.||.
T Consensus 31 g~w~~PgG~ve~gE~~~~aa~R---El~EEtGl~ 61 (149)
T 3son_A 31 DVWQFVAGGGEDEEAISETAKR---ESIEELNLD 61 (149)
T ss_dssp SCEECEEEECCTTCCHHHHHHH---HHHHHHTCC
T ss_pred CCEeCCccccCCCCCHHHHHHH---HHHHHhCCC
Confidence 3567888888999999987775 556666654
No 81
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=22.95 E-value=57 Score=17.82 Aligned_cols=20 Identities=25% Similarity=0.335 Sum_probs=16.1
Q ss_pred CHHHHHHHHHHHHHhhCCCc
Q psy2758 49 NAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 49 ~~~eFA~RVk~~IA~~~gl~ 68 (72)
+..+-.++|+++||+.+|+.
T Consensus 4 ~~~~i~~~l~~ii~~~l~~~ 23 (82)
T 2qnw_A 4 DDRPLLERVKDVVADQLGVD 23 (82)
T ss_dssp CSHHHHHHHHHHHHHHHCCC
T ss_pred cHHHHHHHHHHHHHHHHCCC
Confidence 45567889999999998874
No 82
>1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET: CIT; 2.70A {Homo sapiens} PDB: 1yjx_A*
Probab=22.41 E-value=88 Score=20.86 Aligned_cols=19 Identities=11% Similarity=-0.018 Sum_probs=15.5
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..+|..||++.+.+
T Consensus 151 p~gEs~~~~~~Rv~~~l~~ 169 (262)
T 1yfk_A 151 PSCESLKDTIARALPFWNE 169 (262)
T ss_dssp CSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 4599999999999886543
No 83
>2hzm_A RNA polymerase II mediator complex subunit 20; beta barrel, channel, transcription; 2.40A {Saccharomyces cerevisiae} PDB: 3rj1_F 2hzs_A
Probab=22.34 E-value=92 Score=22.10 Aligned_cols=27 Identities=0% Similarity=-0.006 Sum_probs=21.9
Q ss_pred eeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 31 AIVADVWYLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 31 ~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
.+..+|.|.| .+.-.+++++++.+|++
T Consensus 152 GlLiEiEy~~------~~~~~~~~~~i~~~l~~ 178 (212)
T 2hzm_A 152 GLLIELQADE------AGEFETKIAGIEGHLAE 178 (212)
T ss_dssp EEEEEEEESC------GGGHHHHHHHHHHHHHH
T ss_pred eEEEEEEecC------cchhHHHHHHHHHHHHH
Confidence 4678999999 56667788899999876
No 84
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=22.25 E-value=83 Score=17.68 Aligned_cols=30 Identities=17% Similarity=0.187 Sum_probs=23.0
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-+|--..+++|++.+=|.| ++.++.|+.
T Consensus 32 ~w~~PgG~~e~gE~~~~aa~R---E~~EE~G~~ 61 (129)
T 1mut_A 32 KLEFPGGKIEMGETPEQAVVR---ELQEEVGIT 61 (129)
T ss_dssp CEECCCCCSSSCSSTTHHHHH---HHHTTTCCS
T ss_pred eEECCccCcCCCCCHHHHHHH---HHHHHhCCc
Confidence 466777777889998877765 677888875
No 85
>1im4_A DBH; DNA polymerase PALM, thumb, fingers, helix-hairpin-helix, fidelity, processivity, transferase; 2.30A {Sulfolobus solfataricus} SCOP: e.8.1.7
Probab=22.13 E-value=42 Score=22.72 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=23.5
Q ss_pred EEeCCccCCC--CCCHHHHHHHHHHHHHhhCCCc
Q psy2758 37 WYLPPMFQGQ--GENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 37 ~yLpp~~r~~--~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
-||....-.. ..++.++|.++|+.|.++.|+.
T Consensus 112 ~~lDvt~~~~~l~~~~~~la~~ir~~i~~~~Gl~ 145 (221)
T 1im4_A 112 AYLDVTNKVEGNFENGIELARKIKQEILEKEKIT 145 (221)
T ss_dssp EEEECTTTTTTCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EEEEecchhhhccCCHHHHHHHHHHHHHHHhCCe
Confidence 4665543322 2578999999999999998875
No 86
>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio} PDB: 3e9d_A 3e9e_A
Probab=21.87 E-value=62 Score=21.67 Aligned_cols=18 Identities=22% Similarity=0.307 Sum_probs=14.0
Q ss_pred CCCCHHHHHHHHHHHHHh
Q psy2758 46 QGENAVEFASRVKRAISK 63 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~ 63 (72)
.+|+..+|..||++.+.+
T Consensus 121 ~gEs~~~~~~R~~~~l~~ 138 (265)
T 3e9c_A 121 GGETLEQVKTRFKMFLKS 138 (265)
T ss_dssp --CCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 589999999999987654
No 87
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=21.72 E-value=73 Score=17.37 Aligned_cols=19 Identities=26% Similarity=0.163 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHhhCCCc
Q psy2758 50 AVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 50 ~~eFA~RVk~~IA~~~gl~ 68 (72)
..+-.++|+++||+.+|+.
T Consensus 3 ~~~i~~~l~~ii~~~l~~~ 21 (81)
T 3gzm_A 3 LKSTFDDIKKIISKQLSVE 21 (81)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhCcC
Confidence 3456789999999998874
No 88
>2peb_A Putative dioxygenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, oxidoreductase; 1.46A {Nostoc punctiforme}
Probab=21.69 E-value=99 Score=20.03 Aligned_cols=26 Identities=19% Similarity=0.417 Sum_probs=20.6
Q ss_pred EEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCC
Q psy2758 34 ADVWYLPPMFQGQGENAVEFASRVKRAISKQGGL 67 (72)
Q Consensus 34 ~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl 67 (72)
+.|+| +++..++|..+++.|+++..|
T Consensus 14 aHVYf--------d~~~~~~A~~Lre~i~~~F~l 39 (122)
T 2peb_A 14 AHVYF--------DAASRDVAARVREGLGARFEV 39 (122)
T ss_dssp EEEEE--------CGGGHHHHHHHHHHHHHHSCC
T ss_pred EEEec--------CHHhHHHHHHHHHHHHHhcCe
Confidence 56777 456789999999999988754
No 89
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=21.66 E-value=85 Score=18.83 Aligned_cols=30 Identities=27% Similarity=0.461 Sum_probs=23.7
Q ss_pred EEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 37 WYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 37 ~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
|-||==..++|||+.+=|.| ++.++.|+..
T Consensus 38 W~lPgG~ve~gEt~~~aa~R---El~EEtGl~~ 67 (155)
T 3u53_A 38 WTPPKGHVEPGEDDLETALR---ETQEEAGIEA 67 (155)
T ss_dssp EECSEEECCSSCCHHHHHHH---HHHHHHCCCG
T ss_pred EECCeeeccCCCCHHHHHHH---HHHHHHCCcc
Confidence 66888888999999987764 6777777753
No 90
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=21.63 E-value=84 Score=19.34 Aligned_cols=31 Identities=26% Similarity=0.358 Sum_probs=23.8
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
..|.+|--..+++|++.+=|. .++.++.|+.
T Consensus 31 ~~w~~p~G~~e~gE~~~~aa~---RE~~EE~G~~ 61 (164)
T 2kdv_A 31 HSWQFPQGGINPGESAEQAMY---RELFEEVGLS 61 (164)
T ss_dssp CCEECCEEECCTTCCHHHHHH---HHHHHHHCCC
T ss_pred CeEECCeeecCCCCCHHHHHH---HHHHHHHCCC
Confidence 357788888899999987776 4666777764
No 91
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=21.55 E-value=78 Score=18.48 Aligned_cols=31 Identities=19% Similarity=0.347 Sum_probs=23.9
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
.|-||--..+++|++.+=|. .++.++.|+..
T Consensus 29 ~w~~PgG~ve~gEs~~~aa~---RE~~EEtGl~~ 59 (146)
T 2jvb_A 29 SWSFPRGKISKDENDIDCCI---REVKEEIGFDL 59 (146)
T ss_dssp CCBCCEECCCSSSCHHHHHH---HHHHHHTSCCC
T ss_pred cEECCcccCCCCCCHHHHHH---HHHHHHHCCCc
Confidence 46688888899999988766 47778888753
No 92
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=21.54 E-value=74 Score=17.36 Aligned_cols=20 Identities=30% Similarity=0.223 Sum_probs=16.2
Q ss_pred CHHHHHHHHHHHHHhhCCCc
Q psy2758 49 NAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 49 ~~~eFA~RVk~~IA~~~gl~ 68 (72)
+..+-.++|+++||+.+|+.
T Consensus 6 ~~~~i~~~l~~~i~~~l~~~ 25 (84)
T 2kwl_A 6 DNDEIFSKVRSIISEQLDKK 25 (84)
T ss_dssp THHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHHHhCCC
Confidence 34578899999999998864
No 93
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=21.38 E-value=69 Score=18.24 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=22.9
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
..|-+|--..+++|++.+=|.| ++.++.|+.
T Consensus 25 ~~w~~PgG~ve~gE~~~~aa~R---E~~EE~Gl~ 55 (134)
T 2pbt_A 25 NVWSFPKGNIEPGEKPEETAVR---EVWEETGVK 55 (134)
T ss_dssp SCEECCEEECCTTCCHHHHHHH---HHHHHHSEE
T ss_pred CcEECCccccCCCCCHHHHHHH---HHHHHHCCc
Confidence 4577888888899999988775 556666654
No 94
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=21.24 E-value=94 Score=17.93 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=21.7
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-||--..+++|++.+=|.| ++.++.|+.
T Consensus 36 ~w~lPgG~ve~gE~~~~aa~R---E~~EE~Gl~ 65 (144)
T 3r03_A 36 LWEFPGGKLEPGETPEAALVR---ELAEELGVD 65 (144)
T ss_dssp CEECSEEECCTTCCHHHHHHH---HHHHHHCCB
T ss_pred cEECCCcEecCCCCHHHHHHH---HHHHHhCce
Confidence 466777777889999988875 455666664
No 95
>3gqc_A DNA repair protein REV1; protein-DNA complex, DNA damage, DNA repair, DNA synthesis, binding, magnesium, metal-binding; HET: DNA DOC DCP; 2.50A {Homo sapiens}
Probab=20.90 E-value=63 Score=24.91 Aligned_cols=33 Identities=18% Similarity=0.015 Sum_probs=24.1
Q ss_pred EEEeCCccC--CCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQ--GQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r--~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
=-||....- .-+.++.++|.++|+.|.++.||.
T Consensus 242 EafLDvtg~~~l~g~~~~~la~~Ir~~I~~~tGlt 276 (504)
T 3gqc_A 242 EALVDITEILAETKLTPDEFANAVRMEIKDQTKCA 276 (504)
T ss_dssp EEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHSCC
T ss_pred eEEEeccchHhhcCCCHHHHHHHHHHHHHHHhCCc
Confidence 345555322 124589999999999999998885
No 96
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=20.85 E-value=1.2e+02 Score=17.80 Aligned_cols=31 Identities=26% Similarity=0.497 Sum_probs=24.6
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
+.|-+|-=..+++|++.+=|. .++.++.||.
T Consensus 38 g~w~~PgG~ve~gE~~~~aa~---RE~~EEtGl~ 68 (165)
T 1f3y_A 38 DAWQMPQGGIDEGEDPRNAAI---RELREETGVT 68 (165)
T ss_dssp EEEECCEEECCTTCCHHHHHH---HHHHHHHCCC
T ss_pred CcEECCeeccCCCCCHHHHHH---HHHHHhhCCC
Confidence 678899888899999988776 4667777775
No 97
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=20.73 E-value=37 Score=22.61 Aligned_cols=17 Identities=18% Similarity=0.591 Sum_probs=12.2
Q ss_pred ccccccccccCCChhHH
Q psy2758 4 ICRFGDAFWNSSKYSMT 20 (72)
Q Consensus 4 ~~~fgD~fWns~~~s~~ 20 (72)
.+.|||.||..+..+|-
T Consensus 5 ~~~f~~~fw~~~~~g~~ 21 (276)
T 2v0o_A 5 MAYFVENFWGEKNSGFD 21 (276)
T ss_dssp CCHHHHHBCCTTCCHHH
T ss_pred cchHHHHcCCCCCCCHH
Confidence 36799999987655543
No 98
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=20.53 E-value=50 Score=19.31 Aligned_cols=20 Identities=20% Similarity=0.473 Sum_probs=17.1
Q ss_pred CCCCCHHHHHHHHHHHHHhh
Q psy2758 45 GQGENAVEFASRVKRAISKQ 64 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~~ 64 (72)
.+|-|+.+||.++-..|+++
T Consensus 21 p~GaT~~D~A~~Ih~~lg~~ 40 (78)
T 3hvz_A 21 PIGSTVIDFAYAIHSAVGNR 40 (78)
T ss_dssp ETTCBHHHHHHHHCHHHHHT
T ss_pred cCCCCHHHHHHHhhhhhhcc
Confidence 56889999999998888764
No 99
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=20.46 E-value=76 Score=18.87 Aligned_cols=36 Identities=3% Similarity=0.075 Sum_probs=26.2
Q ss_pred eeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 31 AIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 31 ~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
+..++|.-+.... .|...+++..+.+.+.+++|+..
T Consensus 56 ~a~~~v~sig~~~---~~~n~~~s~~i~~~l~~~Lgi~~ 91 (114)
T 3djh_A 56 CALCSLHSIGKIG---GAQNRSYSKLLCGLLAERLRISP 91 (114)
T ss_dssp CEEEEEEESSCCS---HHHHHHHHHHHHHHHHHHHCCCG
T ss_pred EEEEEEEEccCCC---HHHHHHHHHHHHHHHHHHhCcCc
Confidence 4455666555432 35678899999999999999864
No 100
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=20.31 E-value=75 Score=18.86 Aligned_cols=30 Identities=37% Similarity=0.641 Sum_probs=22.8
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-||--..+.+|++.+=|. .++.++.|+.
T Consensus 47 ~w~~PgG~ve~gE~~~~aa~---REl~EEtGl~ 76 (156)
T 3gg6_A 47 SWYLPAGRMEPGETIVEALQ---REVKEEAGLH 76 (156)
T ss_dssp CEECSEEECCTTCCHHHHHH---HHHHHHHCEE
T ss_pred EEECCeeeccCCCCHHHHHH---HHHHHhhCce
Confidence 56788778899999988776 4567777764
No 101
>4dez_A POL IV 1, DNA polymerase IV 1; Y-family, transferase; HET: DNA; 2.60A {Mycobacterium smegmatis}
Probab=20.17 E-value=83 Score=22.29 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=24.9
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
|=-||.. +.....++.++|.++|+.|.++.|+.
T Consensus 107 DEafld~-t~~~~~~~~~~a~~ir~~i~~~~gl~ 139 (356)
T 4dez_A 107 DEAYLGA-DLPDESDPVEVAERIRTVVAAETGLS 139 (356)
T ss_dssp TEEEEEE-ECCTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred chhheec-ccccCCCHHHHHHHHHHHHHHHhCCc
Confidence 3345543 23446789999999999999999985
No 102
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=20.10 E-value=1e+02 Score=17.86 Aligned_cols=29 Identities=34% Similarity=0.436 Sum_probs=21.9
Q ss_pred EEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 37 WYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 37 ~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
|-||--..+++|++.+=|.| ++.++.|+.
T Consensus 39 w~~PgG~ve~gE~~~~aa~R---E~~EEtGl~ 67 (139)
T 2yyh_A 39 LALPGGFVEVGERVEEAAAR---EMREETGLE 67 (139)
T ss_dssp EECCEEECCTTCCHHHHHHH---HHHHHHCCC
T ss_pred EECccccCCCCCCHHHHHHH---HHHHHHCCC
Confidence 66777788999999877764 666777764
No 103
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=20.08 E-value=72 Score=19.93 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=23.8
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
.-|-||=-..++||++.+=|.| ++.++.||..
T Consensus 37 g~w~lPgG~ve~gEs~~~aa~R---El~EEtGl~~ 68 (163)
T 3f13_A 37 GRYNLPGGKANRGELRSQALIR---EIREETGLRI 68 (163)
T ss_dssp --BBCSEEECCTTCCHHHHHHH---HHHHHHCCCC
T ss_pred CeEECCceeCCCCCCHHHHHHH---HHHHHHCccc
Confidence 4577888888999999887775 6777777753
No 104
>1s2x_A CAG-Z; CAG pathogenicity island, type IV secretion system, unknown function; 1.90A {Helicobacter pylori} SCOP: a.47.3.1
Probab=20.02 E-value=57 Score=22.59 Aligned_cols=18 Identities=17% Similarity=0.276 Sum_probs=15.2
Q ss_pred cCCCCCCHHHHHHHHHHH
Q psy2758 43 FQGQGENAVEFASRVKRA 60 (72)
Q Consensus 43 ~r~~~E~~~eFA~RVk~~ 60 (72)
+.++..+|.+|-.|||.+
T Consensus 45 slkdsndpqdflrrvqel 62 (206)
T 1s2x_A 45 SLKDSNDPQDFLRRVQEL 62 (206)
T ss_dssp GGGGCCSHHHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHH
Confidence 456788999999999986
Done!