Query psy2758
Match_columns 72
No_of_seqs 114 out of 134
Neff 4.2
Searched_HMMs 13730
Date Sat Aug 17 00:26:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2758.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2758hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sf8a_ d.271.1.1 (A:) Chapero 51.3 4.7 0.00035 23.9 2.4 16 47-62 99-114 (115)
2 d1iwga2 d.58.44.1 (A:135-181,A 47.2 4.7 0.00035 22.8 1.9 21 43-63 66-86 (104)
3 d1neka1 a.7.3.1 (A:451-588) Su 43.4 9.6 0.0007 22.8 3.0 24 45-68 1-24 (138)
4 d1bxni_ d.73.1.1 (I:) Ribulose 43.0 6.8 0.0005 24.3 2.2 20 38-63 10-29 (129)
5 d2gdwa1 a.28.1.2 (A:8-83) Pept 42.9 12 0.00091 19.9 3.2 19 52-70 7-25 (76)
6 d1h2ea_ c.60.1.1 (A:) Broad sp 42.4 11 0.00077 22.7 3.1 18 46-63 118-135 (207)
7 d2ofya1 a.35.1.3 (A:3-84) Puta 42.0 1.8 0.00013 24.3 -0.7 20 40-59 2-21 (82)
8 d1xova2 c.56.5.6 (A:1-180) End 41.4 9.4 0.00068 23.6 2.8 32 33-69 87-118 (180)
9 d1irya_ d.113.1.1 (A:) 7,8-dih 39.3 15 0.0011 21.3 3.4 31 36-69 31-61 (156)
10 d2b0va1 d.113.1.1 (A:4-149) Hy 38.3 9.8 0.00071 21.4 2.3 31 35-68 28-58 (146)
11 d1svdm1 d.73.1.1 (M:3-110) Rib 36.7 9.7 0.0007 22.9 2.1 21 37-63 15-35 (108)
12 d1rbli_ d.73.1.1 (I:) Ribulose 36.6 10 0.00074 22.8 2.2 21 37-63 15-35 (109)
13 d1im4a_ e.8.1.7 (A:) DinB homo 36.4 6.5 0.00047 25.0 1.4 46 23-68 92-144 (209)
14 d1v37a_ c.60.1.1 (A:) Alpha-ri 35.3 14 0.001 22.1 2.8 18 46-63 106-123 (171)
15 d2ucza_ d.20.1.1 (A:) Ubiquiti 34.7 15 0.0011 22.0 2.9 21 47-67 144-164 (164)
16 d1klpa_ a.28.1.1 (A:) Acyl car 34.3 18 0.0013 20.3 3.0 20 49-68 4-23 (115)
17 d1bwvs_ d.73.1.1 (S:) Ribulose 33.6 11 0.00081 23.6 2.1 20 38-63 10-29 (138)
18 d1wdds_ d.73.1.1 (S:) Ribulose 33.2 12 0.00086 23.0 2.2 20 38-63 17-36 (122)
19 d1ktga_ d.113.1.1 (A:) Diadeno 32.8 20 0.0014 19.6 3.0 31 36-69 30-60 (137)
20 d1lfwa2 d.58.19.1 (A:187-382) 32.1 21 0.0015 21.4 3.3 31 31-67 158-188 (196)
21 d1vgya2 d.58.19.1 (A:181-293) 31.9 31 0.0023 19.1 3.9 28 31-64 73-100 (113)
22 d1i7ka_ d.20.1.1 (A:) Ubiquiti 27.6 21 0.0015 21.2 2.6 18 48-65 128-145 (146)
23 d1o6za2 d.162.1.1 (A:163-330) 27.1 14 0.001 21.3 1.7 16 54-69 7-22 (161)
24 d1k2ea_ d.113.1.1 (A:) Hypothe 27.1 21 0.0015 19.7 2.5 31 35-68 23-53 (152)
25 d2cmda2 d.162.1.1 (A:146-312) 26.7 14 0.001 21.7 1.7 16 54-69 6-21 (167)
26 d1mlda2 d.162.1.1 (A:145-313) 25.5 19 0.0014 21.3 2.2 16 54-69 6-21 (169)
27 d1puna_ d.113.1.1 (A:) Nucleos 25.3 23 0.0017 19.5 2.4 30 36-68 32-61 (129)
28 d1josa_ d.52.7.1 (A:) Ribosome 24.6 12 0.0009 21.0 1.0 18 54-71 69-86 (100)
29 d1qrjb1 a.28.3.1 (B:131-214) H 24.5 40 0.0029 18.9 3.4 25 42-66 6-30 (84)
30 d1pdoa_ c.54.1.1 (A:) IIA doma 24.1 25 0.0018 20.3 2.4 21 43-63 34-54 (129)
31 d1i0za2 d.162.1.1 (A:161-332) 23.8 18 0.0013 21.3 1.7 16 54-69 7-22 (172)
32 d1hyha2 d.162.1.1 (A:167-329) 23.8 18 0.0013 21.2 1.7 16 54-69 6-21 (163)
33 d1ryaa_ d.113.1.5 (A:) GDP-man 23.6 34 0.0025 19.4 3.0 30 36-68 45-74 (160)
34 d1y7ta2 d.162.1.1 (A:154-332) 23.4 18 0.0013 21.4 1.7 16 54-69 6-21 (173)
35 d1gk8i_ d.73.1.1 (I:) Ribulose 23.4 22 0.0016 21.9 2.2 20 38-63 17-36 (126)
36 d1a8oa_ a.28.3.1 (A:) HIV caps 22.9 49 0.0035 17.6 3.4 24 43-66 4-27 (70)
37 d2dyja1 d.52.7.1 (A:4-94) Ribo 22.9 46 0.0033 18.3 3.4 35 34-71 42-80 (91)
38 d1wxqa2 d.15.10.2 (A:320-395) 22.7 18 0.0013 20.0 1.5 24 41-64 23-46 (76)
39 d1fzta_ c.60.1.1 (A:) Phosphog 22.6 33 0.0024 20.5 2.9 17 46-62 129-145 (211)
40 d2eiaa1 a.28.3.1 (A:148-222) E 22.3 53 0.0038 17.8 3.5 24 43-66 7-30 (75)
41 d1ldma2 d.162.1.1 (A:161-329) 22.3 20 0.0014 20.9 1.7 16 54-69 7-22 (169)
42 d2oyra1 c.66.1.55 (A:1-250) Hy 22.2 13 0.00097 24.6 1.0 19 32-50 163-181 (250)
43 d1l0wa2 d.74.4.1 (A:295-414) P 21.5 16 0.0012 21.4 1.1 21 48-68 100-120 (120)
44 d2fkba1 d.113.1.2 (A:8-168) Hy 21.4 50 0.0036 19.0 3.5 31 37-70 60-91 (161)
45 d2fi2a1 a.28.3.2 (A:37-128) Zi 21.3 36 0.0026 19.4 2.7 19 43-61 15-33 (92)
46 d2bmwa2 c.25.1.1 (A:142-303) F 21.2 18 0.0013 20.3 1.3 12 1-12 119-130 (162)
47 d1nw9b_ c.17.1.1 (B:) Caspase- 20.9 82 0.006 19.2 4.7 40 19-72 224-263 (277)
48 d1bifa2 c.60.1.4 (A:250-468) 6 20.7 37 0.0027 20.6 2.9 19 45-63 111-129 (219)
49 d2a6ta2 d.113.1.7 (A:95-245) m 20.6 32 0.0023 19.6 2.4 30 36-68 28-57 (151)
50 d2azwa1 d.113.1.1 (A:2-148) Hy 20.2 34 0.0025 18.9 2.5 30 36-68 41-70 (147)
No 1
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]}
Probab=51.29 E-value=4.7 Score=23.87 Aligned_cols=16 Identities=19% Similarity=0.250 Sum_probs=14.0
Q ss_pred CCCHHHHHHHHHHHHH
Q psy2758 47 GENAVEFASRVKRAIS 62 (72)
Q Consensus 47 ~E~~~eFA~RVk~~IA 62 (72)
=|+|.+|++|+.++|.
T Consensus 99 l~Dp~~f~~ri~~ll~ 114 (115)
T d1sf8a_ 99 LEDPNLFIRRMNQLLV 114 (115)
T ss_dssp CSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 4899999999999875
No 2
>d1iwga2 d.58.44.1 (A:135-181,A:274-330) Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains {Escherichia coli [TaxId: 562]}
Probab=47.21 E-value=4.7 Score=22.82 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=19.0
Q ss_pred cCCCCCCHHHHHHHHHHHHHh
Q psy2758 43 FQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 43 ~r~~~E~~~eFA~RVk~~IA~ 63 (72)
.++++.|+++-+++||+.+++
T Consensus 66 ~~~~gaN~i~v~~~V~~~l~e 86 (104)
T d1iwga2 66 KLATGANALDTAAAIRAELAK 86 (104)
T ss_dssp ECCTTCCTHHHHHHHHHHTTT
T ss_pred eccCCCcHHHHHHHHHHHHHH
Confidence 568899999999999999976
No 3
>d1neka1 a.7.3.1 (A:451-588) Succinate dehydogenase {Escherichia coli [TaxId: 562]}
Probab=43.40 E-value=9.6 Score=22.81 Aligned_cols=24 Identities=13% Similarity=0.293 Sum_probs=21.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 45 GQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
+.||++.+.-.++|+++-+.+|++
T Consensus 1 k~G~~p~~l~~~Lq~~M~~~~Gi~ 24 (138)
T d1neka1 1 RNGEDPVAIRKALQECMQHNFSVF 24 (138)
T ss_dssp CSSBCHHHHHHHHHHHHHHHTSSE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEE
Confidence 468999999999999999999985
No 4
>d1bxni_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Alcaligenes eutrophus [TaxId: 106590]}
Probab=43.03 E-value=6.8 Score=24.29 Aligned_cols=20 Identities=10% Similarity=0.441 Sum_probs=17.8
Q ss_pred EeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 38 YLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 38 yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
||||++ +.|-++-|+.+|++
T Consensus 10 yLP~Lt------d~~I~~QV~yll~q 29 (129)
T d1bxni_ 10 FLPELT------DEQITKQLEYCLNQ 29 (129)
T ss_dssp TSSCCC------HHHHHHHHHHHHHH
T ss_pred cCCCCC------HHHHHHHHHHHHHC
Confidence 899997 78899999999987
No 5
>d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]}
Probab=42.88 E-value=12 Score=19.87 Aligned_cols=19 Identities=11% Similarity=0.204 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHhhCCCccC
Q psy2758 52 EFASRVKRAISKQGGLVDL 70 (72)
Q Consensus 52 eFA~RVk~~IA~~~gl~~l 70 (72)
+-.+++.++.++-+|+..+
T Consensus 7 ~~E~~l~~i~~~vL~~~~i 25 (76)
T d2gdwa1 7 AVESKLAEIWERVLGVSGI 25 (76)
T ss_dssp HHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHHHcCCCCC
Confidence 3556677777777776544
No 6
>d1h2ea_ c.60.1.1 (A:) Broad specificity phosphatase PhoE (YhfR) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=42.43 E-value=11 Score=22.69 Aligned_cols=18 Identities=22% Similarity=0.398 Sum_probs=15.7
Q ss_pred CCCCHHHHHHHHHHHHHh
Q psy2758 46 QGENAVEFASRVKRAISK 63 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~ 63 (72)
.+|+..+|..||+..|.+
T Consensus 118 ~gEs~~~~~~Rv~~~l~~ 135 (207)
T d1h2ea_ 118 RGERFCDVQQRALEAVQS 135 (207)
T ss_dssp SSCCHHHHHHHHHHHHHH
T ss_pred CCcccccccccchhHHHh
Confidence 589999999999887764
No 7
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=41.98 E-value=1.8 Score=24.35 Aligned_cols=20 Identities=10% Similarity=0.182 Sum_probs=14.3
Q ss_pred CCccCCCCCCHHHHHHHHHH
Q psy2758 40 PPMFQGQGENAVEFASRVKR 59 (72)
Q Consensus 40 pp~~r~~~E~~~eFA~RVk~ 59 (72)
+|++..+-+.+..|..|+|.
T Consensus 2 ~P~t~e~~~~~~~lG~~ir~ 21 (82)
T d2ofya1 2 VPLTAEELERGQRLGELLRS 21 (82)
T ss_dssp CCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 46666666677788888776
No 8
>d1xova2 c.56.5.6 (A:1-180) Endolysin Ply, catalytic domain {Bacteriophage Psa [TaxId: 171618]}
Probab=41.39 E-value=9.4 Score=23.64 Aligned_cols=32 Identities=25% Similarity=0.491 Sum_probs=25.2
Q ss_pred EEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 33 VADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 33 V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
-++|+|.|. ++.+.++|..++..+.+..|+.+
T Consensus 87 G~ev~~~~~-----~~~s~~lA~~i~~~l~~~~g~~n 118 (180)
T d1xova2 87 GVEVWYYAG-----DEKGRKLAVEISAKMAKALGLPN 118 (180)
T ss_dssp SEEEEEETT-----CHHHHHHHHHHHHHHHHHHTCCE
T ss_pred ceEEEecCC-----chHHHHHHHHHHHHHHhccCCCc
Confidence 457888763 45678999999999999888764
No 9
>d1irya_ d.113.1.1 (A:) 7,8-dihydro-8-oxoguanine triphosphatase Hmth1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.30 E-value=15 Score=21.35 Aligned_cols=31 Identities=23% Similarity=0.215 Sum_probs=25.7
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
.|-||==..++|||+.+=|.| ++.++.||..
T Consensus 31 ~W~lPGG~ve~gEt~~~aa~R---E~~EEtGl~~ 61 (156)
T d1irya_ 31 RWNGFGGKVQEGETIEDGARR---ELQEESGLTV 61 (156)
T ss_dssp CEECBCCBCCTTCCHHHHHHH---HHHHHHSCCB
T ss_pred EEECcEeEecCCCCHHHHHHH---HHHHHHCCcc
Confidence 467899999999999997775 8888888753
No 10
>d2b0va1 d.113.1.1 (A:4-149) Hypothetical protein NE0184 {Nitrosomonas europaea [TaxId: 915]}
Probab=38.31 E-value=9.8 Score=21.40 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=24.7
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
+.|-||-=..+.|||+.+=|.| ++.++.|+.
T Consensus 28 ~~w~~PgG~ve~gEt~~~aa~R---E~~EEtGl~ 58 (146)
T d2b0va1 28 IKLNQPAGHLEPGESIIQACSR---EVLEETGHS 58 (146)
T ss_dssp CEEECSEEECCTTSCHHHHHHH---HHHHHHSEE
T ss_pred CEEECCeeeECCCCCHHHHHHH---HHHHhheee
Confidence 3588998899999999987764 777777764
No 11
>d1svdm1 d.73.1.1 (M:3-110) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Halothiobacillus neapolitanus [TaxId: 927]}
Probab=36.66 E-value=9.7 Score=22.88 Aligned_cols=21 Identities=43% Similarity=0.672 Sum_probs=17.7
Q ss_pred EEeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 37 WYLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 37 ~yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
-||||++ ..|-++-|+.+|++
T Consensus 15 SyLP~Lt------de~I~~QV~yll~q 35 (108)
T d1svdm1 15 SYLPPMN------AERIRAQIKYAIAQ 35 (108)
T ss_dssp TTSCCCC------HHHHHHHHHHHHHT
T ss_pred ccCCCCC------HHHHHHHHHHHHHC
Confidence 3889886 77889999999987
No 12
>d1rbli_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Synechococcus sp., strain pcc 6301 [TaxId: 1131]}
Probab=36.65 E-value=10 Score=22.79 Aligned_cols=21 Identities=29% Similarity=0.581 Sum_probs=17.9
Q ss_pred EEeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 37 WYLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 37 ~yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
-||||++ +.|-++-|+.+|++
T Consensus 15 SyLP~Lt------d~~I~~QV~yll~q 35 (109)
T d1rbli_ 15 SYLPPLS------DRQIAAQIEYMIEQ 35 (109)
T ss_dssp TTSSCCC------HHHHHHHHHHHHHH
T ss_pred ccCCCCC------HHHHHHHHHHHHhC
Confidence 4889886 77899999999987
No 13
>d1im4a_ e.8.1.7 (A:) DinB homolog (DBH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=36.42 E-value=6.5 Score=24.96 Aligned_cols=46 Identities=24% Similarity=0.330 Sum_probs=31.8
Q ss_pred HHHHhhcceeE-----EEEEEeCCcc--CCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 23 LYMMMTSWAIV-----ADVWYLPPMF--QGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 23 l~~lMTsW~~V-----~dV~yLpp~~--r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
++.++.++.-. +|--||.... +...+++.++|+++|+.|-++.||.
T Consensus 92 i~~il~~~~p~ve~~SiDE~fldlt~~~~~~~~~~~~~a~~ir~~I~~~~gl~ 144 (209)
T d1im4a_ 92 IMNLLNKHADKIEVASIDEAYLDVTNKVEGNFENGIELARKIKQEILEKEKIT 144 (209)
T ss_dssp HHHHHHTTCSEEEEEETTEEEEECTTTTTTCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhcCCceeeccccceeeeeccchhhccchHHHHHHHHHHHHHHhcCCc
Confidence 44555555433 3455766543 3445688999999999999999985
No 14
>d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase {Thermus thermophilus [TaxId: 274]}
Probab=35.35 E-value=14 Score=22.13 Aligned_cols=18 Identities=33% Similarity=0.445 Sum_probs=16.3
Q ss_pred CCCCHHHHHHHHHHHHHh
Q psy2758 46 QGENAVEFASRVKRAISK 63 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA~ 63 (72)
.+|+..+|.+||.+.+.+
T Consensus 106 ~gEs~~~~~~Rv~~~l~~ 123 (171)
T d1v37a_ 106 GGESLSAFQERVFRFLEG 123 (171)
T ss_dssp TSCCHHHHHHHHHHHHHH
T ss_pred CccchhhHHHHHHHHHHH
Confidence 589999999999999865
No 15
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Probab=34.74 E-value=15 Score=22.03 Aligned_cols=21 Identities=38% Similarity=0.477 Sum_probs=18.2
Q ss_pred CCCHHHHHHHHHHHHHhhCCC
Q psy2758 47 GENAVEFASRVKRAISKQGGL 67 (72)
Q Consensus 47 ~E~~~eFA~RVk~~IA~~~gl 67 (72)
.++..+|.++||.-+.+.+|.
T Consensus 144 ~~~~~~f~~~~r~~~~k~~~~ 164 (164)
T d2ucza_ 144 RDNRPEFERQVKLSILKSLGF 164 (164)
T ss_dssp HTTHHHHHHHHHHHHHHHTTC
T ss_pred HHCHHHHHHHHHHHHHHHcCC
Confidence 467889999999999998884
No 16
>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=34.32 E-value=18 Score=20.33 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHHHHhhCCCc
Q psy2758 49 NAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 49 ~~~eFA~RVk~~IA~~~gl~ 68 (72)
+..+...+|+++||+.+|+.
T Consensus 4 t~~~i~~~l~~iv~~~l~~~ 23 (115)
T d1klpa_ 4 TQEEIIAGIAEIIEEVTGIE 23 (115)
T ss_dssp CHHHHHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHHHHHHHCCC
Confidence 35678999999999999975
No 17
>d1bwvs_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Galdieria partita [TaxId: 83374]}
Probab=33.61 E-value=11 Score=23.59 Aligned_cols=20 Identities=25% Similarity=0.481 Sum_probs=17.8
Q ss_pred EeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 38 YLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 38 yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
||||++ .+|-++-|+.+|++
T Consensus 10 yLP~Lt------deqI~~QV~yll~q 29 (138)
T d1bwvs_ 10 FLPDLT------DEQIKKQIDYMISK 29 (138)
T ss_dssp TSCCCC------HHHHHHHHHHHHHT
T ss_pred cCCCCC------HHHHHHHHHHHHcC
Confidence 899997 78899999999987
No 18
>d1wdds_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=33.20 E-value=12 Score=22.97 Aligned_cols=20 Identities=20% Similarity=0.582 Sum_probs=17.2
Q ss_pred EeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 38 YLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 38 yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
||||++ ..|-++-|+.+|++
T Consensus 17 yLP~lt------d~qI~~QI~yll~q 36 (122)
T d1wdds_ 17 YLPPLT------VEDLLKQIEYLLRS 36 (122)
T ss_dssp TSSCCC------HHHHHHHHHHHHHT
T ss_pred cCCCCC------HHHHHHHHHHHHHC
Confidence 788886 68899999999987
No 19
>d1ktga_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Caenorhabditis elegans [TaxId: 6239]}
Probab=32.85 E-value=20 Score=19.63 Aligned_cols=31 Identities=19% Similarity=0.334 Sum_probs=24.5
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCcc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLVD 69 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~ 69 (72)
.|=+|-=..+++|++.+=|. .++.++.|+..
T Consensus 30 ~W~~PgG~ie~gE~~~~aa~---RE~~EEtGl~~ 60 (137)
T d1ktga_ 30 HWTPPKGHVDPGEDEWQAAI---RETKEEANITK 60 (137)
T ss_dssp CEESSEEECCTTCCHHHHHH---HHHHHHHCCCG
T ss_pred cEeCcccccccCCCHHHHHH---HHHHHHhCCcc
Confidence 46678888899999988766 57888888864
No 20
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]}
Probab=32.07 E-value=21 Score=21.41 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=23.5
Q ss_pred eeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCC
Q psy2758 31 AIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGL 67 (72)
Q Consensus 31 ~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl 67 (72)
...+|++|.| +++..+.-+++++.++....+
T Consensus 158 ~~~~diR~p~------~~~~e~i~~~i~~~~~~~~~v 188 (196)
T d1lfwa2 158 SLLNNVRYPQ------GTDPDTMIKQVLDKFSGILDV 188 (196)
T ss_dssp EEEEEEEECT------TCCHHHHHHHHHHHHTTTEEE
T ss_pred EEEEEEccCC------CCCHHHHHHHHHHHhcCcceE
Confidence 3678999976 667888889998888765543
No 21
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]}
Probab=31.93 E-value=31 Score=19.11 Aligned_cols=28 Identities=11% Similarity=0.227 Sum_probs=20.3
Q ss_pred eeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhh
Q psy2758 31 AIVADVWYLPPMFQGQGENAVEFASRVKRAISKQ 64 (72)
Q Consensus 31 ~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~ 64 (72)
-+..|++++|. |+..++-+|+++++++.
T Consensus 73 ~~~~~iR~~~~------~~~~~i~~~i~~i~~~~ 100 (113)
T d1vgya2 73 NVKFNFRFSTE------STEAGLKQRVHAILDKH 100 (113)
T ss_dssp EEEEEEEECTT------SCHHHHHHHHHHHHHHT
T ss_pred EEEEEEEeCCH------HHHHHHHHHHHHHHHHc
Confidence 35678998874 56778888898876553
No 22
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]}
Probab=27.63 E-value=21 Score=21.24 Aligned_cols=18 Identities=28% Similarity=0.346 Sum_probs=15.9
Q ss_pred CCHHHHHHHHHHHHHhhC
Q psy2758 48 ENAVEFASRVKRAISKQG 65 (72)
Q Consensus 48 E~~~eFA~RVk~~IA~~~ 65 (72)
+++.+|.++||+.+++.+
T Consensus 128 ~n~~~f~k~~~~~~~K~~ 145 (146)
T d1i7ka_ 128 KNPTAFKKYLQETYSKQV 145 (146)
T ss_dssp TSHHHHHHHHHHHHHTTC
T ss_pred hCHHHHHHHHHHHHHccC
Confidence 578899999999999875
No 23
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=27.13 E-value=14 Score=21.28 Aligned_cols=16 Identities=13% Similarity=0.104 Sum_probs=13.8
Q ss_pred HHHHHHHHHhhCCCcc
Q psy2758 54 ASRVKRAISKQGGLVD 69 (72)
Q Consensus 54 A~RVk~~IA~~~gl~~ 69 (72)
.+|-+..||+++|+..
T Consensus 7 ~~R~~~~lA~~l~v~~ 22 (161)
T d1o6za2 7 SARFRYVLSEEFDAPV 22 (161)
T ss_dssp HHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHCcCH
Confidence 4799999999999864
No 24
>d1k2ea_ d.113.1.1 (A:) Hypothetical protein PAE3301 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=27.07 E-value=21 Score=19.72 Aligned_cols=31 Identities=23% Similarity=0.411 Sum_probs=24.2
Q ss_pred EEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 35 DVWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 35 dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
+.|-||==..+.||++.+=|.| ++.++.||.
T Consensus 23 ~~w~lPgG~ie~gE~~~~aa~R---E~~EEtGl~ 53 (152)
T d1k2ea_ 23 GVYIYPGGHVEHNETPIEAVKR---EFEEETGIV 53 (152)
T ss_dssp CSEECSEEECCTTCCHHHHHHH---HHHHHHSEE
T ss_pred CeEECCeeEEeCCccHHHHHHH---HHHHHHCCc
Confidence 3577999999999999998874 666666664
No 25
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=26.69 E-value=14 Score=21.69 Aligned_cols=16 Identities=13% Similarity=0.094 Sum_probs=13.7
Q ss_pred HHHHHHHHHhhCCCcc
Q psy2758 54 ASRVKRAISKQGGLVD 69 (72)
Q Consensus 54 A~RVk~~IA~~~gl~~ 69 (72)
++|-+.+||+++|+..
T Consensus 6 s~R~~~~iA~~l~v~~ 21 (167)
T d2cmda2 6 IIRSNTFVAELKGKQP 21 (167)
T ss_dssp HHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHCcCH
Confidence 4799999999999864
No 26
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=25.54 E-value=19 Score=21.25 Aligned_cols=16 Identities=19% Similarity=0.223 Sum_probs=13.8
Q ss_pred HHHHHHHHHhhCCCcc
Q psy2758 54 ASRVKRAISKQGGLVD 69 (72)
Q Consensus 54 A~RVk~~IA~~~gl~~ 69 (72)
+.|-|..||+++|+..
T Consensus 6 s~R~~~~la~~l~v~~ 21 (169)
T d1mlda2 6 IVRANAFVAELKGLDP 21 (169)
T ss_dssp HHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHCcCH
Confidence 4799999999999864
No 27
>d1puna_ d.113.1.1 (A:) Nucleoside triphosphate pyrophosphorylase (MutT) {Escherichia coli [TaxId: 562]}
Probab=25.31 E-value=23 Score=19.46 Aligned_cols=30 Identities=17% Similarity=0.187 Sum_probs=22.8
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-+|=-+.++||++.+=|. .++.++.|+.
T Consensus 32 ~W~~PgG~ve~gEs~~~a~~---RE~~EE~gl~ 61 (129)
T d1puna_ 32 KLEFPGGKIEMGETPEQAVV---RELQEEVGIT 61 (129)
T ss_dssp CCBCSCCSCTTTSCTTHHHH---HHHHHTTCSC
T ss_pred cEECCcceecCCCchhHHHH---HHHHHHhCCc
Confidence 34577778899999998766 5677788875
No 28
>d1josa_ d.52.7.1 (A:) Ribosome-binding factor A, RbfA {Haemophilus influenzae [TaxId: 727]}
Probab=24.60 E-value=12 Score=21.02 Aligned_cols=18 Identities=11% Similarity=0.065 Sum_probs=14.3
Q ss_pred HHHHHHHHHhhCCCccCC
Q psy2758 54 ASRVKRAISKQGGLVDLM 71 (72)
Q Consensus 54 A~RVk~~IA~~~gl~~l~ 71 (72)
+..+|..+|+++++.-+|
T Consensus 69 ~~~ir~~la~~l~~r~~P 86 (100)
T d1josa_ 69 SPYIRSLLGKAMRLRIVP 86 (100)
T ss_dssp HHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHHhcCCccCC
Confidence 345899999999887665
No 29
>d1qrjb1 a.28.3.1 (B:131-214) HTLV-I capsid protein {Human T-cell leukemia virus type 1 [TaxId: 11908]}
Probab=24.52 E-value=40 Score=18.90 Aligned_cols=25 Identities=24% Similarity=0.290 Sum_probs=20.3
Q ss_pred ccCCCCCCHHHHHHHHHHHHHhhCC
Q psy2758 42 MFQGQGENAVEFASRVKRAISKQGG 66 (72)
Q Consensus 42 ~~r~~~E~~~eFA~RVk~~IA~~~g 66 (72)
++..++|.=.+|.+|..+.|-++.+
T Consensus 6 IkQGpkEpf~dfVdRl~~a~~~~~~ 30 (84)
T d1qrjb1 6 ILQGLEEPYHAFVERLNIALDNGLP 30 (84)
T ss_dssp CCBCTTSCHHHHHHHHHHHHHTTCC
T ss_pred CccCCCCcHHHHHHHHHHHHHhhcC
Confidence 3557899999999999999866544
No 30
>d1pdoa_ c.54.1.1 (A:) IIA domain of mannose transporter, IIA-Man {Escherichia coli [TaxId: 562]}
Probab=24.05 E-value=25 Score=20.28 Aligned_cols=21 Identities=24% Similarity=0.222 Sum_probs=18.3
Q ss_pred cCCCCCCHHHHHHHHHHHHHh
Q psy2758 43 FQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 43 ~r~~~E~~~eFA~RVk~~IA~ 63 (72)
.-.+++++.+|.++++++|.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~i~~ 54 (129)
T d1pdoa_ 34 DFVPGENAETLIEKYNAQLAK 54 (129)
T ss_dssp CBCTTCCHHHHHHHHHHHHTT
T ss_pred EccCCCCHHHHHHHHHHHHHh
Confidence 445799999999999999976
No 31
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}
Probab=23.77 E-value=18 Score=21.30 Aligned_cols=16 Identities=13% Similarity=0.320 Sum_probs=13.5
Q ss_pred HHHHHHHHHhhCCCcc
Q psy2758 54 ASRVKRAISKQGGLVD 69 (72)
Q Consensus 54 A~RVk~~IA~~~gl~~ 69 (72)
.+|-|..||+++|+..
T Consensus 7 s~R~~~~lA~~lgv~~ 22 (172)
T d1i0za2 7 SARFRYLMAEKLGIHP 22 (172)
T ss_dssp HHHHHHHHHHHHTSCG
T ss_pred HHHHHHHHHHHhCcCH
Confidence 4799999999999863
No 32
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Probab=23.76 E-value=18 Score=21.24 Aligned_cols=16 Identities=25% Similarity=0.343 Sum_probs=13.7
Q ss_pred HHHHHHHHHhhCCCcc
Q psy2758 54 ASRVKRAISKQGGLVD 69 (72)
Q Consensus 54 A~RVk~~IA~~~gl~~ 69 (72)
.+|-|..||+++|+..
T Consensus 6 s~R~~~~lA~~l~v~~ 21 (163)
T d1hyha2 6 TARMQRAVGEAFDLDP 21 (163)
T ss_dssp HHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHhCcCH
Confidence 4799999999999864
No 33
>d1ryaa_ d.113.1.5 (A:) GDP-mannose mannosyl hydrolase NudD {Escherichia coli [TaxId: 562]}
Probab=23.63 E-value=34 Score=19.38 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=23.3
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|.||==..+.|||+.+=|. .++.++.||.
T Consensus 45 ~W~lPGG~ve~gEt~~~aa~---REl~EEtGl~ 74 (160)
T d1ryaa_ 45 YWFVPGGRVQKDETLEAAFE---RLTMAELGLR 74 (160)
T ss_dssp SEECCEEECCTTCCHHHHHH---HHHHHHHSSC
T ss_pred cEecccccccCCCcHHHHHH---HHHHHHhCce
Confidence 47788888899999887666 5677777764
No 34
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=23.44 E-value=18 Score=21.42 Aligned_cols=16 Identities=25% Similarity=0.291 Sum_probs=13.6
Q ss_pred HHHHHHHHHhhCCCcc
Q psy2758 54 ASRVKRAISKQGGLVD 69 (72)
Q Consensus 54 A~RVk~~IA~~~gl~~ 69 (72)
..|-|..||+++|+..
T Consensus 6 s~R~r~~lA~~l~v~~ 21 (173)
T d1y7ta2 6 HNRAKAQLAKKTGTGV 21 (173)
T ss_dssp HHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHCcCH
Confidence 4799999999999864
No 35
>d1gk8i_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=23.41 E-value=22 Score=21.92 Aligned_cols=20 Identities=30% Similarity=0.657 Sum_probs=16.4
Q ss_pred EeCCccCCCCCCHHHHHHHHHHHHHh
Q psy2758 38 YLPPMFQGQGENAVEFASRVKRAISK 63 (72)
Q Consensus 38 yLpp~~r~~~E~~~eFA~RVk~~IA~ 63 (72)
||||++ .+|-++-|+-+|.+
T Consensus 17 yLPpLt------deqI~kQI~Y~i~~ 36 (126)
T d1gk8i_ 17 YLPPLT------DEQIAAQVDYIVAN 36 (126)
T ss_dssp TSSCCC------HHHHHHHHHHHHHT
T ss_pred cCCCCC------HHHHHHHHHHHHhc
Confidence 788886 67888989888876
No 36
>d1a8oa_ a.28.3.1 (A:) HIV capsid protein, dimerisation domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=22.90 E-value=49 Score=17.61 Aligned_cols=24 Identities=17% Similarity=0.293 Sum_probs=19.2
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhCC
Q psy2758 43 FQGQGENAVEFASRVKRAISKQGG 66 (72)
Q Consensus 43 ~r~~~E~~~eFA~RVk~~IA~~~g 66 (72)
+..+.|.-.+|..|+.+.+-.+.+
T Consensus 4 kQgpkEpf~dfV~Rl~~~~~~~~~ 27 (70)
T d1a8oa_ 4 RQGPKEPFRDYVDRFYKTLRAEQA 27 (70)
T ss_dssp CCCTTSCHHHHHHHHHHHHHTTTC
T ss_pred ccCCCCCHHHHHHHHHHHHHhhcC
Confidence 457889999999999988766543
No 37
>d2dyja1 d.52.7.1 (A:4-94) Ribosome-binding factor A, RbfA {Thermus thermophilus [TaxId: 274]}
Probab=22.88 E-value=46 Score=18.26 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCCCCCHHHHHHH----HHHHHHhhCCCccCC
Q psy2758 34 ADVWYLPPMFQGQGENAVEFASR----VKRAISKQGGLVDLM 71 (72)
Q Consensus 34 ~dV~yLpp~~r~~~E~~~eFA~R----Vk~~IA~~~gl~~l~ 71 (72)
+.|+|-.- .++|...++-++ +|..||+++.+..+|
T Consensus 42 akVyvs~~---~~~~~~~~~L~~~~~~ir~~l~~~l~~r~~P 80 (91)
T d2dyja1 42 LSVYVEAF---REEEGALRALSRAERRLVAALARRVRMRRLP 80 (91)
T ss_dssp EEEEEECS---SCHHHHHHHHHHTHHHHHHHHHTTSCCSSCC
T ss_pred EEEEEEec---cchHHHHHHHHHHHHHHHHHHHhhCCCccCC
Confidence 44555432 234556666666 888889988887665
No 38
>d1wxqa2 d.15.10.2 (A:320-395) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=22.73 E-value=18 Score=20.00 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=19.8
Q ss_pred CccCCCCCCHHHHHHHHHHHHHhh
Q psy2758 41 PMFQGQGENAVEFASRVKRAISKQ 64 (72)
Q Consensus 41 p~~r~~~E~~~eFA~RVk~~IA~~ 64 (72)
|....+|-++.+||.++-+.|+++
T Consensus 23 ~~~Lp~GsTv~D~A~~IH~dlg~~ 46 (76)
T d1wxqa2 23 VFLMKKGSTPRDLAFKVHTDLGKG 46 (76)
T ss_dssp CEEEETTCCHHHHHHHHCHHHHHT
T ss_pred cEEeCCCCcHHHHHHHHhHHHHhh
Confidence 445567899999999999999874
No 39
>d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=22.62 E-value=33 Score=20.47 Aligned_cols=17 Identities=29% Similarity=0.282 Sum_probs=14.5
Q ss_pred CCCCHHHHHHHHHHHHH
Q psy2758 46 QGENAVEFASRVKRAIS 62 (72)
Q Consensus 46 ~~E~~~eFA~RVk~~IA 62 (72)
.+|+..++.+||+..+.
T Consensus 129 ~gEs~~~~~~Rv~~~~~ 145 (211)
T d1fzta_ 129 NGESLKDTAERVLPYYK 145 (211)
T ss_dssp TCCCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH
Confidence 48999999999988654
No 40
>d2eiaa1 a.28.3.1 (A:148-222) EIAV capsid protein p26 {Equine infectious anemia virus [TaxId: 11665]}
Probab=22.34 E-value=53 Score=17.76 Aligned_cols=24 Identities=33% Similarity=0.415 Sum_probs=19.7
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhCC
Q psy2758 43 FQGQGENAVEFASRVKRAISKQGG 66 (72)
Q Consensus 43 ~r~~~E~~~eFA~RVk~~IA~~~g 66 (72)
+..+.|.-.+|..|+.+.+-++.+
T Consensus 7 kQGpkEpf~dfVdRl~~a~~~~~~ 30 (75)
T d2eiaa1 7 RQGAKEPYPEFVDRLLSQIKSEGH 30 (75)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCCHHHHHHHHHHHHHhhcC
Confidence 456789999999999998877654
No 41
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]}
Probab=22.34 E-value=20 Score=20.94 Aligned_cols=16 Identities=13% Similarity=0.310 Sum_probs=13.5
Q ss_pred HHHHHHHHHhhCCCcc
Q psy2758 54 ASRVKRAISKQGGLVD 69 (72)
Q Consensus 54 A~RVk~~IA~~~gl~~ 69 (72)
..|-|..||+++|+..
T Consensus 7 s~R~~~~lA~~l~v~~ 22 (169)
T d1ldma2 7 SARFRYLMGERLGVHS 22 (169)
T ss_dssp HHHHHHHHHHHHTSCG
T ss_pred HHHHHHHHHHHHCcCH
Confidence 4799999999999753
No 42
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella flexneri [TaxId: 623]}
Probab=22.24 E-value=13 Score=24.64 Aligned_cols=19 Identities=37% Similarity=0.541 Sum_probs=14.1
Q ss_pred eEEEEEEeCCccCCCCCCH
Q psy2758 32 IVADVWYLPPMFQGQGENA 50 (72)
Q Consensus 32 ~V~dV~yLpp~~r~~~E~~ 50 (72)
.-+||-||.||.+....++
T Consensus 163 ~~~DvIYlDPMFp~~~Ksa 181 (250)
T d2oyra1 163 PRPQVVYLDPMFPHKQKSA 181 (250)
T ss_dssp SCCSEEEECCCCCCCCC--
T ss_pred CCCCEEEECCCCccccccc
Confidence 3479999999998776654
No 43
>d1l0wa2 d.74.4.1 (A:295-414) Prokaryotic AspRS, insert domain {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=21.53 E-value=16 Score=21.44 Aligned_cols=21 Identities=19% Similarity=0.077 Sum_probs=17.1
Q ss_pred CCHHHHHHHHHHHHHhhCCCc
Q psy2758 48 ENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 48 E~~~eFA~RVk~~IA~~~gl~ 68 (72)
+...+...+++..||+++||.
T Consensus 100 ~~~~~~LG~lR~~la~~l~Lr 120 (120)
T d1l0wa2 100 KVAATALGAVRLRAADLLGLK 120 (120)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 346678889999999999884
No 44
>d2fkba1 d.113.1.2 (A:8-168) Hypothetical protein YfcD {Escherichia coli [TaxId: 562]}
Probab=21.41 E-value=50 Score=19.01 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=23.2
Q ss_pred EEeCC-ccCCCCCCHHHHHHHHHHHHHhhCCCccC
Q psy2758 37 WYLPP-MFQGQGENAVEFASRVKRAISKQGGLVDL 70 (72)
Q Consensus 37 ~yLpp-~~r~~~E~~~eFA~RVk~~IA~~~gl~~l 70 (72)
|-+|| =...+||++.+=|. .++.++.||...
T Consensus 60 w~~~~GG~ie~gEs~~~aa~---REl~EE~Gi~~~ 91 (161)
T d2fkba1 60 LDATAGGVVQADEQLLESAR---REAEEELGIAGV 91 (161)
T ss_dssp EESSBCCBCBTTCCHHHHHH---HHHHHHHCCBSC
T ss_pred ccccccccccccCcHHHHHH---HHHHHHhCCccc
Confidence 44776 56789999998665 678888888754
No 45
>d2fi2a1 a.28.3.2 (A:37-128) Zinc finger protein 42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.35 E-value=36 Score=19.40 Aligned_cols=19 Identities=5% Similarity=0.073 Sum_probs=15.9
Q ss_pred cCCCCCCHHHHHHHHHHHH
Q psy2758 43 FQGQGENAVEFASRVKRAI 61 (72)
Q Consensus 43 ~r~~~E~~~eFA~RVk~~I 61 (72)
..+++++|.||+.|.+..-
T Consensus 15 ~y~e~~~p~e~l~rL~eLc 33 (92)
T d2fi2a1 15 HYEEATGPQEALAQLRELC 33 (92)
T ss_dssp CCCTTTCHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHH
Confidence 4578999999999988753
No 46
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]}
Probab=21.19 E-value=18 Score=20.32 Aligned_cols=12 Identities=17% Similarity=0.385 Sum_probs=7.8
Q ss_pred CCCccccccccc
Q psy2758 1 MCGICRFGDAFW 12 (72)
Q Consensus 1 ~~~~~~fgD~fW 12 (72)
.||.|-+.|+.-
T Consensus 119 vCGp~~m~~~v~ 130 (162)
T d2bmwa2 119 ICGPPPMEEGID 130 (162)
T ss_dssp EEECTTHHHHHH
T ss_pred EECCHHHHHHHH
Confidence 377777766554
No 47
>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.85 E-value=82 Score=19.24 Aligned_cols=40 Identities=23% Similarity=0.286 Sum_probs=32.3
Q ss_pred HHHHHHHHhhcceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCccCCC
Q psy2758 19 MTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVDLMW 72 (72)
Q Consensus 19 ~~~yl~~lMTsW~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~l~W 72 (72)
|+++|+..+...+ .+++-.+.-.+|+..++++.+-...||
T Consensus 224 f~~~L~~~l~~~~--------------~~~~l~~il~~V~~~V~~~~~~kQ~P~ 263 (277)
T d1nw9b_ 224 YVETLDDIFEQWA--------------HSEDLQSLLLRVANAVSVKGIYKQMPG 263 (277)
T ss_dssp HHHHHHHHHHHHT--------------TTSCHHHHHHHHHHHHHTTCCSCCCCC
T ss_pred HHHHHHHHHHHhC--------------CCCCHHHHHHHHHHHHHHhcCCceeeE
Confidence 7888888886432 356789999999999999988887776
No 48
>d1bifa2 c.60.1.4 (A:250-468) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.69 E-value=37 Score=20.62 Aligned_cols=19 Identities=21% Similarity=0.398 Sum_probs=16.6
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy2758 45 GQGENAVEFASRVKRAISK 63 (72)
Q Consensus 45 ~~~E~~~eFA~RVk~~IA~ 63 (72)
..+|+..++.+|++..|.+
T Consensus 111 p~gEs~~~~~~R~~~~l~~ 129 (219)
T d1bifa2 111 PKGESYEDLVQRLEPVIME 129 (219)
T ss_dssp TTCCCHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHH
Confidence 3589999999999999875
No 49
>d2a6ta2 d.113.1.7 (A:95-245) mRNA decapping enzyme Dcp2p catalytic domain {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=20.65 E-value=32 Score=19.58 Aligned_cols=30 Identities=23% Similarity=0.361 Sum_probs=23.9
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-||-=..+.||++.+=|. .++.++.|+.
T Consensus 28 ~W~lPgG~ie~gEs~~~aa~---RE~~EEtGi~ 57 (151)
T d2a6ta2 28 GWGFPKGKIDKDESDVDCAI---REVYEETGFD 57 (151)
T ss_dssp CCBCSEEECCTTCCHHHHHH---HHHHHHHCCC
T ss_pred CEECCcccccCCCCHHHHHH---HHHHHHhCCC
Confidence 35688889999999988776 5777777774
No 50
>d2azwa1 d.113.1.1 (A:2-148) Hypothetical protein EF1141 {Enterococcus faecalis [TaxId: 1351]}
Probab=20.18 E-value=34 Score=18.95 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=22.8
Q ss_pred EEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCc
Q psy2758 36 VWYLPPMFQGQGENAVEFASRVKRAISKQGGLV 68 (72)
Q Consensus 36 V~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~ 68 (72)
.|-||-=..++||++.+=|.| ++.++.||.
T Consensus 41 ~w~lPgG~ie~gEs~~~aa~R---E~~EEtGl~ 70 (147)
T d2azwa1 41 AYFLPGGEIEGTETKEEAIHR---EVLEELGIS 70 (147)
T ss_dssp CEECSEEECCTTCCHHHHHHH---HHHHHHSEE
T ss_pred eEECcEeEeCCCCCHHHHHHH---HHHhhhcee
Confidence 467888899999999988775 555556654
Done!