Your job contains 1 sequence.
>psy2759
MAHTWPFELDVFQKQILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAG
RAGRRGLDESGTVIIMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLMRVSMVNV
EEMMSMSFKEFGSRFRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFENFFDQAKRFFEI
RDSYMSLVEKTAEFKNAIVPGIVLHIWTLEHRDKLGLLLKVDHRRALYR
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2759
(229 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 413 5.5e-40 2
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 408 1.7e-39 2
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 408 1.9e-39 2
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 407 2.4e-39 2
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 403 3.4e-39 2
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 403 3.4e-39 2
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 403 3.9e-39 2
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 403 3.9e-39 2
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 403 6.4e-39 2
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 398 2.2e-38 2
UNIPROTKB|F5H6Y7 - symbol:SKIV2L "Helicase SKI2W" species... 403 1.5e-36 1
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 375 1.6e-36 2
ZFIN|ZDB-GENE-010430-5 - symbol:skiv2l "superkiller viral... 357 9.5e-35 2
TAIR|locus:2075566 - symbol:AT3G46960 species:3702 "Arabi... 351 4.6e-33 2
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA... 339 3.0e-32 2
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 347 3.4e-32 2
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 306 3.2e-31 2
WB|WBGene00008502 - symbol:skih-2 species:6239 "Caenorhab... 336 6.3e-31 2
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 312 7.3e-31 2
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 310 2.4e-30 2
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 299 2.0e-27 2
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 303 1.1e-25 1
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A... 283 1.5e-25 2
TAIR|locus:2063648 - symbol:HEN2 "hua enhancer 2" species... 280 1.6e-25 2
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel... 286 2.0e-25 2
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ... 257 8.4e-24 3
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller... 253 1.5e-23 3
UNIPROTKB|G3MYJ7 - symbol:SKIV2L2 "Uncharacterized protei... 261 1.9e-23 2
UNIPROTKB|G4NH56 - symbol:MGG_03931 "FRQ-interacting RNA ... 279 4.4e-23 1
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic... 265 5.1e-23 2
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel... 262 8.1e-23 2
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 261 9.8e-23 2
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 261 9.9e-23 2
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei... 261 1.4e-22 2
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi... 261 1.4e-22 2
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei... 261 1.4e-22 2
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ... 244 2.5e-22 3
ZFIN|ZDB-GENE-040426-2854 - symbol:skiv2l2 "superkiller v... 266 9.7e-22 1
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie... 259 5.6e-21 1
UNIPROTKB|F1N993 - symbol:F1N993 "Uncharacterized protein... 258 6.9e-21 1
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A... 252 3.0e-20 1
UNIPROTKB|F1MAH7 - symbol:F1MAH7 "Uncharacterized protein... 250 5.0e-20 1
UNIPROTKB|D4AE49 - symbol:D4AE49 "Uncharacterized protein... 240 3.6e-19 1
TAIR|locus:2020573 - symbol:EMB25 "EMBRYO DEFECTIVE 25" s... 231 6.3e-18 1
UNIPROTKB|Q10701 - symbol:helY "Probable helicase HelY" s... 190 1.1e-13 1
ZFIN|ZDB-GENE-061207-43 - symbol:hfm1 "HFM1, ATP-dependen... 143 2.7e-07 1
WB|WBGene00016194 - symbol:C28H8.3 species:6239 "Caenorha... 143 4.7e-07 1
RGD|1584010 - symbol:Hfm1 "HFM1, ATP-dependent DNA helica... 138 1.0e-06 1
SGD|S000003503 - symbol:SLH1 "Putative RNA helicase relat... 140 1.4e-06 1
TAIR|locus:2130235 - symbol:ATSUV3 species:3702 "Arabidop... 133 2.3e-06 1
DICTYBASE|DDB_G0279107 - symbol:DDB_G0279107 "Helicase PO... 136 2.6e-06 1
UNIPROTKB|E2RA34 - symbol:HFM1 "Uncharacterized protein" ... 135 4.3e-06 1
UNIPROTKB|F1MFR1 - symbol:HFM1 "Uncharacterized protein" ... 135 4.3e-06 1
UNIPROTKB|E2R5U9 - symbol:HFM1 "Uncharacterized protein" ... 135 4.4e-06 1
DICTYBASE|DDB_G0290389 - symbol:ascc3 "activating signal ... 135 6.8e-06 1
UNIPROTKB|E2QVY0 - symbol:ASCC3 "Uncharacterized protein"... 134 7.8e-06 1
WB|WBGene00012896 - symbol:snrp-200 species:6239 "Caenorh... 134 8.8e-06 1
UNIPROTKB|Q9U2G0 - symbol:Y46G5A.4 "Putative U5 small nuc... 134 8.8e-06 1
RGD|1307995 - symbol:Ascc3 "activating signal cointegrato... 134 9.0e-06 1
MGI|MGI:1925237 - symbol:Ascc3 "activating signal cointeg... 134 9.0e-06 1
UNIPROTKB|E1BNG3 - symbol:ascc3 "Activating signal cointe... 134 9.0e-06 1
UNIPROTKB|F6Y2F0 - symbol:ASCC3 "Uncharacterized protein"... 134 9.0e-06 1
UNIPROTKB|Q8N3C0 - symbol:ASCC3 "Activating signal cointe... 134 9.0e-06 1
CGD|CAL0003134 - symbol:orf19.3980 species:5476 "Candida ... 133 1.0e-05 1
UNIPROTKB|A6NGI5 - symbol:HFM1 "Probable ATP-dependent DN... 134 1.0e-05 2
UNIPROTKB|F1S4E9 - symbol:HFM1 "Uncharacterized protein" ... 135 1.1e-05 2
UNIPROTKB|H9L351 - symbol:H9L351 "Uncharacterized protein... 122 1.1e-05 1
UNIPROTKB|F1NTD6 - symbol:ascc3 "Activating signal cointe... 132 1.6e-05 1
UNIPROTKB|A2PYH4 - symbol:HFM1 "Probable ATP-dependent DN... 134 1.8e-05 2
POMBASE|SPAC9.03c - symbol:brr2 "U5 snRNP complex subunit... 131 2.1e-05 1
FB|FBgn0038344 - symbol:CG5205 species:7227 "Drosophila m... 131 2.1e-05 1
TAIR|locus:2059969 - symbol:AT2G42270 species:3702 "Arabi... 130 2.7e-05 1
DICTYBASE|DDB_G0270042 - symbol:ascc3l "U5 small nuclear ... 130 2.8e-05 1
UNIPROTKB|G4MUT4 - symbol:MGG_01682 "ATP-dependent RNA he... 125 3.2e-05 1
TAIR|locus:2125677 - symbol:AT4G32700 species:3702 "Arabi... 129 3.7e-05 1
UNIPROTKB|Q5H9U9 - symbol:DDX60L "Probable ATP-dependent ... 128 3.7e-05 1
TAIR|locus:2089144 - symbol:RCK "ROCK-N-ROLLERS" species:... 126 4.1e-05 1
ASPGD|ASPL0000051297 - symbol:AN10194 species:162425 "Eme... 128 4.9e-05 1
UNIPROTKB|F1NMU1 - symbol:POLQ "Uncharacterized protein" ... 124 5.3e-05 1
RGD|1309795 - symbol:Polq "polymerase (DNA directed), the... 128 5.7e-05 1
UNIPROTKB|D4A628 - symbol:Polq "Polymerase (DNA directed)... 128 5.7e-05 1
TAIR|locus:2037375 - symbol:emb1507 "embryo defective 150... 126 8.5e-05 1
WB|WBGene00021905 - symbol:helq-1 species:6239 "Caenorhab... 122 9.5e-05 1
RGD|1560014 - symbol:Ddx60 "DEAD (Asp-Glu-Ala-Asp) box po... 123 0.00011 1
UNIPROTKB|F1RIW4 - symbol:DDX60 "Uncharacterized protein"... 123 0.00015 1
CGD|CAL0001532 - symbol:orf19.3098 species:5476 "Candida ... 123 0.00017 1
UNIPROTKB|G4N5J1 - symbol:MGG_06124 "Activating signal co... 122 0.00023 1
UNIPROTKB|F1SU44 - symbol:F1SU44 "Uncharacterized protein... 119 0.00024 1
UNIPROTKB|E1BH78 - symbol:LOC100850262 "Uncharacterized p... 122 0.00025 1
UNIPROTKB|O75643 - symbol:SNRNP200 "U5 small nuclear ribo... 122 0.00025 1
UNIPROTKB|F1LNJ2 - symbol:Ascc3l1 "Protein Ascc3l1" speci... 122 0.00025 1
FB|FBgn0263599 - symbol:l(3)72Ab "lethal (3) 72Ab" specie... 122 0.00025 1
POMBASE|SPBC13G1.10c - symbol:mug81 "ATP-dependent RNA he... 121 0.00029 1
SGD|S000003220 - symbol:HFM1 "Meiosis specific DNA helica... 119 0.00029 1
UNIPROTKB|O75417 - symbol:POLQ "DNA polymerase theta" spe... 121 0.00040 1
ZFIN|ZDB-GENE-081105-64 - symbol:si:ch211-251j10.5 "si:ch... 120 0.00043 1
DICTYBASE|DDB_G0278827 - symbol:DDB_G0278827 "Probable AT... 119 0.00047 1
GENEDB_PFALCIPARUM|PFF1140c - symbol:PFF1140c "ATP-depend... 117 0.00048 1
UNIPROTKB|C6KT73 - symbol:PFF1140c "ATP dependent DEAD-bo... 117 0.00048 1
ASPGD|ASPL0000044033 - symbol:AN2482 species:162425 "Emer... 119 0.00052 1
WARNING: Descriptions of 6 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 413 (150.4 bits), Expect = 5.5e-40, Sum P(2) = 5.5e-40
Identities = 91/209 (43%), Positives = 127/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 716
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 776
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA+L K+ G + + + T L + ++ + E R + ++
Sbjct: 777 KDSKAHEQALAELTKKL---GALEEPEVTGQLVDLPEYYSWGEELTETRSQIQHRIIESV 833
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + EH + LG++L+V
Sbjct: 834 NGLKSLSAGRVVVVKNQEHHNALGVILQV 862
Score = 54 (24.1 bits), Expect = 5.5e-40, Sum P(2) = 5.5e-40
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 304 AFQWAFEPDVFQKQAILHLE 323
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 408 (148.7 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 91/209 (43%), Positives = 127/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 616 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 675
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 676 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 735
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA L ++ G + + T L + ++ A+ E R+ + ++
Sbjct: 736 KDSKAHEQALADLTKRL---GALEEPDVTGQLADLPEYYSWAEELTETRNMIQRRIMESV 792
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + EH + LG++L+V
Sbjct: 793 NGLKSLSVGRVVVVKNEEHHNALGVILQV 821
Score = 54 (24.1 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 263 AFQWAFEPDVFQKQAILHLE 282
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 408 (148.7 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 91/209 (43%), Positives = 127/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 651 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 710
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 711 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 770
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA L ++ G + + T L + ++ A+ E R+ + ++
Sbjct: 771 KDSKAHEQALADLTKRL---GALEEPDVTGQLADLPEYYSWAEELTETRNMIQRRIMESV 827
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + EH + LG++L+V
Sbjct: 828 NGLKSLSVGRVVVVKNEEHHNALGVILQV 856
Score = 54 (24.1 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 298 AFQWAFEPDVFQKQAILHLE 317
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 407 (148.3 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 90/209 (43%), Positives = 127/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 716
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 776
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA+L ++ G + + T L + ++ + E R + ++
Sbjct: 777 KDSKAHEQALAELTKRL---GALEEPDVTGQLVDLPEYYSWGEELTETRSLIQRRIMESV 833
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + + EH + LG++L+V
Sbjct: 834 NGLKSLSVGRVVVVKSREHHNALGVILQV 862
Score = 54 (24.1 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 304 AFQWAFEPDVFQKQAILHLE 323
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 403 (146.9 bits), Expect = 3.4e-39, Sum P(2) = 3.4e-39
Identities = 89/209 (42%), Positives = 126/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 464 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 523
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 524 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 583
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA+L ++ G + + T L + ++ + E + + ++
Sbjct: 584 KDSKAHEQALAELTKRL---GALEEPDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESV 640
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + EH + LG++L+V
Sbjct: 641 NGLKSLSAGRVVVVKNQEHHNALGVILQV 669
Score = 54 (24.1 bits), Expect = 3.4e-39, Sum P(2) = 3.4e-39
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 111 AFQWAFEPDVFQKQAILHLE 130
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 403 (146.9 bits), Expect = 3.4e-39, Sum P(2) = 3.4e-39
Identities = 89/209 (42%), Positives = 126/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 464 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 523
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 524 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 583
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA+L ++ G + + T L + ++ + E + + ++
Sbjct: 584 KDSKAHEQALAELTKRL---GALEEPDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESV 640
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + EH + LG++L+V
Sbjct: 641 NGLKSLSAGRVVVVKNQEHHNALGVILQV 669
Score = 54 (24.1 bits), Expect = 3.4e-39, Sum P(2) = 3.4e-39
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 111 AFQWAFEPDVFQKQAILHLE 130
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 403 (146.9 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 89/209 (42%), Positives = 126/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 499 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 558
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 559 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 618
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA+L ++ G + + T L + ++ + E + + ++
Sbjct: 619 KDSKAHEQALAELTKRL---GALEEPDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESV 675
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + EH + LG++L+V
Sbjct: 676 NGLKSLSAGRVVVVKNQEHHNALGVILQV 704
Score = 54 (24.1 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 146 AFQWAFEPDVFQKQAILHLE 165
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 403 (146.9 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 89/209 (42%), Positives = 126/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 499 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 558
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 559 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 618
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA+L ++ G + + T L + ++ + E + + ++
Sbjct: 619 KDSKAHEQALAELTKRL---GALEEPDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESV 675
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + EH + LG++L+V
Sbjct: 676 NGLKSLSAGRVVVVKNQEHHNALGVILQV 704
Score = 54 (24.1 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 146 AFQWAFEPDVFQKQAILHLE 165
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 403 (146.9 bits), Expect = 6.4e-39, Sum P(2) = 6.4e-39
Identities = 89/209 (42%), Positives = 126/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 716
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 776
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA+L ++ G + + T L + ++ + E + + ++
Sbjct: 777 KDSKAHEQALAELTKRL---GALEEPDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESV 833
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + EH + LG++L+V
Sbjct: 834 NGLKSLSAGRVVVVKNQEHHNALGVILQV 862
Score = 54 (24.1 bits), Expect = 6.4e-39, Sum P(2) = 6.4e-39
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 304 AFQWAFEPDVFQKQAILHLE 323
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 398 (145.2 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 89/214 (41%), Positives = 126/214 (58%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 716
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 776
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ L +L ++ G + + T L + ++ + E R + ++
Sbjct: 777 KDSKAHEQALDELTKRL---GALEEPDTTGQLVDLSEYYGWGEELTETRSLIQRRIMESV 833
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKVDHRRA 226
++ G V+ + E+ + LG++L+V A
Sbjct: 834 NGLKSLSAGRVVVVKNQEYHNTLGVILQVSSNSA 867
Score = 54 (24.1 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A W FE DVFQKQ + E
Sbjct: 304 AFQWSFEPDVFQKQAILHLE 323
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 403 (146.9 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 89/209 (42%), Positives = 126/209 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DGS RDL P EY+QMAGRAGRRGLD +GTVI
Sbjct: 291 KVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI 350
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++CK +P L +MM+GK ++L SQFRLTY MILNL F EF SR
Sbjct: 351 LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR 410
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFE--NFFDQAKRFFEIRDSYMSLVEKTA 192
+ +++ LA+L ++ G + + T L + ++ + E + + ++
Sbjct: 411 KDSKAHEQALAELTKRL---GALEEPDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESV 467
Query: 193 EFKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
++ G V+ + EH + LG++L+V
Sbjct: 468 NGLKSLSAGRVVVVKNQEHHNALGVILQV 496
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 375 (137.1 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 87/205 (42%), Positives = 117/205 (57%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS +K+DG E R+L P EYIQMAGRAGRRG DE+GT I
Sbjct: 607 KLLFATETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAI 666
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
IMCK +P L+ M+LG KL SQF L YA+IL FKEF +
Sbjct: 667 IMCKGSVPPSMELRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSFKEFNLK 726
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFENFFDQAKRFFEIRDSYMSLVEKTAEF 194
++ ++ L E K + + V NF+D+A +++ + M V +
Sbjct: 727 LQLPTQQKQLRLAEDKFAMLPTLGEHLQPLV---NFYDKAVEYWKEKHRIMKFVVTQPKI 783
Query: 195 KNAIVPGIVLHIWTLEHRDKLGLLL 219
+ + G V+ I +H +KL +LL
Sbjct: 784 QKELKAGRVIVITQGKHYNKLAILL 808
Score = 59 (25.8 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A +PFELDVFQKQ + E
Sbjct: 256 AMDFPFELDVFQKQAILKLE 275
>ZFIN|ZDB-GENE-010430-5 [details] [associations]
symbol:skiv2l "superkiller viralicidic activity 2 (S.
cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
Uniprot:F1R881
Length = 1249
Score = 357 (130.7 bits), Expect = 9.5e-35, Sum P(2) = 9.5e-35
Identities = 87/208 (41%), Positives = 120/208 (57%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPARTV FDS RK+DG+ R+L P EYIQMAGRAGRRGLD +GTVI
Sbjct: 666 KVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGTVI 725
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
I+CK + L MMLGK T L SQFRLTY MILNL F E +
Sbjct: 726 ILCKAGVHDMGELHSMMLGKPTVLHSQFRLTYTMILNLLRVEALRVTDMMKRSFSE--NH 783
Query: 135 FRMQKNKEDLAQLEAKVRQGGEV-RQAQDTDVLFENFFDQAKRFFEIRDSYMSLVEKTAE 193
Q +++ +++L + + + Q +D+L +++ S V ++
Sbjct: 784 RDTQAHEKRISELRNTLSSLPPLDTEGQLSDLL--SYYHTITELHITTQSLQQAVLESVN 841
Query: 194 FKNAIVPGIVLHIWTLEHRDKLGLLLKV 221
A+ G V+ + +H + LG++L+V
Sbjct: 842 GLKALSVGRVVIVNNSQHHNSLGVILQV 869
Score = 61 (26.5 bits), Expect = 9.5e-35, Sum P(2) = 9.5e-35
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A +PFELDVFQKQ + E
Sbjct: 312 AFKYPFELDVFQKQAILRLE 331
>TAIR|locus:2075566 [details] [associations]
symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
GO:GO:0035864 Uniprot:F4JAA5
Length = 1347
Score = 351 (128.6 bits), Expect = 4.6e-33, Sum P(2) = 4.6e-33
Identities = 79/207 (38%), Positives = 125/207 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LF+TETFAMGVN PARTV FD+ RK+DG E R L P EY QMAGRAGRRGLD++GTV+
Sbjct: 740 KVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVV 799
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
+MC++E+P + L+++++G T+L SQFRLTY MIL+L F EF ++
Sbjct: 800 VMCRDEVPDESDLRRVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQ 859
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFENFFDQAKRFFEIRDSYMSLVEKTAEF 194
++ + K+ L ++ + + + + E+++D E + V ++
Sbjct: 860 KKLPE-KQQLLMIKRSLPTK-HIECIKGEPAI-EDYYDMYMEANEYNNKMSEAVMQSPYA 916
Query: 195 KNAIVPGIVLHIWTLEHRDKL-GLLLK 220
++ +V G V+ + + D L G++LK
Sbjct: 917 QSFLVQGRVVVMKSGMGIDNLLGIVLK 943
Score = 52 (23.4 bits), Expect = 4.6e-33, Sum P(2) = 4.6e-33
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 1 MAHTWPFELDVFQKQILFATE 21
MA +PFELD FQK+ + E
Sbjct: 353 MAIEFPFELDNFQKEAICCLE 373
>POMBASE|SPCC550.03c [details] [associations]
symbol:SPCC550.03c "Ski complex RNA helicase Ski2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
[GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
NextBio:20800023 Uniprot:O59801
Length = 1213
Score = 339 (124.4 bits), Expect = 3.0e-32, Sum P(2) = 3.0e-32
Identities = 82/213 (38%), Positives = 119/213 (55%)
Query: 11 VFQK---QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGL 67
+FQ+ ++LFATETFAMGVNMPA++V F T+K+DG RDL P EY Q +GRAGRRGL
Sbjct: 634 LFQRGLVKVLFATETFAMGVNMPAKSVVFSGTQKHDGRNFRDLLPGEYTQCSGRAGRRGL 693
Query: 68 DESGTVIIMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXX 127
D +GTVII+ + ELP +L+ M++G +KL+SQFRLTY MILNL
Sbjct: 694 DVTGTVIILSRSELPDTASLRHMIMGPSSKLISQFRLTYNMILNLLRVETLRIEDMIKRS 753
Query: 128 FKEFGSRFRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVL-FENFFDQAKRFFEIRDSYMS 186
F E ++ + +++E + E K+ ++ D D+ ++ ++ F E
Sbjct: 754 FSENVNQTLVPQHEEKIKSFEEKL--SALKKEMSDVDLKEIKSCLLSSESFKEYTKKMHF 811
Query: 187 LVEKTAEFKNAIVPGIVLHIWTLEHRDKLGLLL 219
TA K G V+ L+ +G+LL
Sbjct: 812 RAITTANGKRIFKDGRVIVFQQLDFTRTVGVLL 844
Score = 55 (24.4 bits), Expect = 3.0e-32, Sum P(2) = 3.0e-32
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 1 MAHTWPFELDVFQKQILFATE 21
MA +PFELD FQK+ ++ E
Sbjct: 273 MALDFPFELDNFQKEAIYHLE 293
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 347 (127.2 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 78/166 (46%), Positives = 104/166 (62%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMGVNMPA+TV + STRK+DG RDL P EY QM+GRAGRRGLD+ GTVI
Sbjct: 781 KVLFATETFAMGVNMPAKTVVYSSTRKHDGITFRDLIPGEYTQMSGRAGRRGLDKVGTVI 840
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
I +++P Q ++ M+LG ++L SQFRLTY MILNL F EF S+
Sbjct: 841 ITYWKDIPEQATIESMILGTPSRLNSQFRLTYNMILNLLRVPDFKVEDMIKRSFSEFSSQ 900
Query: 135 FRM---QKNKEDLAQLEAKVRQGGEVRQAQDTDVLFENFFDQAKRF 177
+ +K E L Q + ++ Q + D D ++ F QAK++
Sbjct: 901 KELPGIEKQIEKLQQQQKQLAQVDCILGEPDIDHYYK-LFSQAKKY 945
Score = 48 (22.0 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 5 WPFELDVFQKQILFATE 21
+PF+LD FQKQ + E
Sbjct: 430 YPFDLDSFQKQAIVHME 446
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 306 (112.8 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 62/138 (44%), Positives = 91/138 (65%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMG+N+P RTV F S RK+DG R+L P E+ QM+GRAGRRGLD++GTVI
Sbjct: 670 KVLFATETFAMGLNLPTRTVIFSSMRKHDGRSFRNLLPGEFTQMSGRAGRRGLDKTGTVI 729
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
+M ++ K+++LG TKL SQFRLTY+MILNL F E ++
Sbjct: 730 VMAYDDPLSPTDFKEVVLGTPTKLSSQFRLTYSMILNLLRIEALKVEEMIKHSFSENSTQ 789
Query: 135 FRMQKNKEDLAQLEAKVR 152
+ +N++ +++ +++
Sbjct: 790 VLLPENQKRYDEIKKQLQ 807
Score = 79 (32.9 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 1 MAHTWPFELDVFQKQILFATE 21
MA TWPFELD FQK+ +F E
Sbjct: 282 MARTWPFELDTFQKEAVFHLE 302
>WB|WBGene00008502 [details] [associations]
symbol:skih-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
NextBio:899374 Uniprot:Q19103
Length = 1266
Score = 336 (123.3 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
Identities = 69/106 (65%), Positives = 85/106 (80%)
Query: 11 VFQK---QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGL 67
+FQK +ILFATETFAMGVNMPAR V FDS K+DG+ERR LNP EY QMAGRAGRRGL
Sbjct: 646 LFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGL 705
Query: 68 DESGTVIIMCKEE-LPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
D +GTVII+CK+ +P + LK ++ G+ +L S+FR+TY+MILNL
Sbjct: 706 DLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNL 751
Score = 46 (21.3 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 1 MAHTWPFELDVFQKQILFATE 21
MA +PF LD FQ+ + E
Sbjct: 285 MARKYPFSLDPFQQSSVLCME 305
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 312 (114.9 bits), Expect = 7.3e-31, Sum P(2) = 7.3e-31
Identities = 69/141 (48%), Positives = 89/141 (63%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMG+N+P RTV F RK+DG RDL P EY QMAGRAGRRGLD G VI
Sbjct: 718 KVLFATETFAMGLNLPTRTVVFSGFRKHDGKGFRDLLPGEYTQMAGRAGRRGLDNVGYVI 777
Query: 75 IMC--KEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFG 132
++ K+E P AL+KM+LG TKL SQFRLTY MILNL F E
Sbjct: 778 VVNSGKDEAPPAGALRKMILGDPTKLRSQFRLTYNMILNLLRVEALKIEEMIKRSFSENA 837
Query: 133 SRFRMQKNKEDLAQLEAKVRQ 153
++ + ++++ + EA + +
Sbjct: 838 TQALLPEHEKQVQISEASLEK 858
Score = 70 (29.7 bits), Expect = 7.3e-31, Sum P(2) = 7.3e-31
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 1 MAHTWPFELDVFQKQILFATE 21
MA WPFELD FQK+ ++ E
Sbjct: 315 MAREWPFELDTFQKEAVYHLE 335
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 310 (114.2 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 76/213 (35%), Positives = 112/213 (52%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETFAMG+N+P RTV F S RK+DG+ R+L P E+ QMAGRAGRRGLD +GTVI
Sbjct: 717 KVLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVI 776
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
+M K++ +G T+L SQFRLTY MILNL F E
Sbjct: 777 VMAYNSPLSIATFKEVTMGVPTRLQSQFRLTYNMILNLLRIEALRVEEMIKYSFSENAKE 836
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFENFFDQAKRFFEIRDSYMSLVEKTAEF 194
++++ + L+ ++ Q E + + D E F + + E + M + K+
Sbjct: 837 TLQPEHEKQIKVLQEEL-QTIEYKSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSI 895
Query: 195 KNAIVPGIVLHIWTLEHRDKLGLLLKVDHRRAL 227
+ + G ++ KLG + KV + A+
Sbjct: 896 LHILKEGRLVAFRDPNDCLKLGFVFKVSLKDAV 928
Score = 67 (28.6 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A +WPFELD FQK+ ++ E
Sbjct: 323 ARSWPFELDTFQKEAVYHLE 342
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 299 (110.3 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 77/216 (35%), Positives = 122/216 (56%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETF++G+NMPA+TV F S RK+DG +R + P+E++QM+GRAGRRGLD+ G VI
Sbjct: 501 KVLFATETFSIGLNMPAKTVVFTSVRKFDGFSQRWVTPSEFVQMSGRAGRRGLDDRGIVI 560
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
+M EE+ A K+++ G+Q +L S F L Y MILNL F +F +
Sbjct: 561 MMIGEEMDPAVA-KEIVRGEQDRLNSAFHLGYNMILNLMRVEGISPEFMLERCFYQFQNT 619
Query: 135 FRMQKNKEDLAQLEAK-----VRQGGEVRQAQDTDVLFENFFDQAKRFFEIRDSYMSLVE 189
+ +++LA+LE K + G +R+ D + F D ++R + +S E
Sbjct: 620 AGLAGLEKELAELEEKRANMTISDEGTIREYYDIRTQIDQFND------DVR-AVISHPE 672
Query: 190 KTAEFKNAIVPGIVLHIWTLEHRDKLGLLLKVDHRR 225
+ F + PG +LHI + G+++ + R+
Sbjct: 673 YSVPF---LTPGRLLHIKYKDFDFGWGVVVNIKKRK 705
Score = 48 (22.0 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 2 AHTWPFELDVFQKQILFATETFAMGVNMPARTVA 35
A WPF LD FQ Q+ ++ V + A T A
Sbjct: 146 ARVWPFTLDPFQ-QVAVSSIQRGESVLVSAHTSA 178
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 64/137 (46%), Positives = 86/137 (62%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETF+MG+NMPARTV F S RK+DGS+ R + EYIQMAGRAGRRG D+ GTVI
Sbjct: 464 KVLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRGKDDRGTVI 523
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
+M + +A K+++ G L SQFRLTY M+LNL F +F S
Sbjct: 524 LMVDSAMSADDA-KQIIKGATDPLNSQFRLTYNMVLNLMRVEGMAVSWIINNSFHQFQSY 582
Query: 135 FRMQKNKEDLAQLEAKV 151
++ + + Q+E K+
Sbjct: 583 AKIPEIDKKCVQVERKI 599
>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
symbol:PFF0100w "putative ATP dependent RNA
helicase" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
Length = 1350
Score = 283 (104.7 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 58/98 (59%), Positives = 73/98 (74%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LF+TETF+MG+NMPA+TV F S K+DG E+R + EYIQMAGRAGRRGLD+ G VI
Sbjct: 598 KVLFSTETFSMGINMPAKTVVFTSLTKFDGLEKRLITSGEYIQMAGRAGRRGLDDRGIVI 657
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
IM L +EA K+ +G+ +LVSQF L Y MILNL
Sbjct: 658 IMLDTPLHWREA-HKLFVGEANRLVSQFHLGYNMILNL 694
Score = 49 (22.3 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 2 AHTWPFELDVFQKQILFATE 21
A T+ FELD FQK+ + E
Sbjct: 248 ARTYKFELDTFQKKSIECLE 267
>TAIR|locus:2063648 [details] [associations]
symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
"specification of floral organ identity" evidence=IMP] [GO:0016070
"RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
[GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
RNA interference" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
Uniprot:Q9ZVW2
Length = 995
Score = 280 (103.6 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 67/162 (41%), Positives = 91/162 (56%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPA+TV F + +K+DG R + EYIQM+GRAGRRG DE G IIM
Sbjct: 429 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIM 488
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSRFR 136
E++ L+ MMLGK L+S FRL+Y ILNL + +F+
Sbjct: 489 IDEQME-MNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHV--IRHSFHQFQ 545
Query: 137 MQKNKEDLAQLEAKVRQGGEVRQAQ-DTDVL-FENF-FDQAK 175
+K D+ +K+ + + A + +V + N FD AK
Sbjct: 546 HEKALPDIGNKVSKLEEEAAILNASGEAEVAEYHNLQFDIAK 587
Score = 48 (22.0 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 1 MAHTWPFELDVFQ 13
MA T+PF+LD FQ
Sbjct: 74 MAKTYPFKLDPFQ 86
>SGD|S000003586 [details] [associations]
symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
"ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
GermOnline:YJL050W Uniprot:P47047
Length = 1073
Score = 286 (105.7 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 77/213 (36%), Positives = 118/213 (55%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETF++G+NMPA+TV F S RK+DG + R ++ EYIQM+GRAGRRGLD+ G VI
Sbjct: 497 KVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVI 556
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
+M E++ Q A K M+ G+ +L S F L Y MILNL F +F +
Sbjct: 557 MMIDEKMEPQVA-KGMVKGQADRLDSAFHLGYNMILNLMRVEGISPEFMLEHSFFQFQNV 615
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFENFFDQAKRFFEIRDSYMSLVEKTAEF 194
+ ++ LA+L+ K G EV ++ E +QA + + R+ +V A
Sbjct: 616 ISVPVMEKKLAELK-KDFDGIEVEDEENVKEYHE--IEQAIKGY--REDVRQVVTHPANA 670
Query: 195 KNAIVPGIVLHIWTLEHRDKLGLLLKVDHRRAL 227
+ + PG ++ I ++ +D G VD + +
Sbjct: 671 LSFLQPGRLVEI-SVNGKDNYGWGAVVDFAKRI 702
Score = 42 (19.8 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 2 AHTWPFELDVFQ 13
A T+PF LD FQ
Sbjct: 143 ARTYPFTLDPFQ 154
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 257 (95.5 bits), Expect = 8.4e-24, Sum P(3) = 8.4e-24
Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETF++G+NMPA+TV F S RK+DG R ++ EYIQM+GRAGRRGLD+ G VI
Sbjct: 533 KVLFATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIVI 592
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
+M E++ Q A K M+ G+ +L S F L Y MILNL
Sbjct: 593 MMIDEKMEPQVA-KGMVKGQADRLDSAFHLGYNMILNL 629
Score = 42 (19.8 bits), Expect = 8.4e-24, Sum P(3) = 8.4e-24
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 2 AHTWPFELDVFQ 13
A T+PF LD FQ
Sbjct: 178 ARTYPFTLDPFQ 189
Score = 36 (17.7 bits), Expect = 8.4e-24, Sum P(3) = 8.4e-24
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 147 LEAKVRQGGEVRQAQD---TDVLFENFFDQ 173
+E K R E+ + T++LF FF++
Sbjct: 934 VELKGRVAAELSTGDELMITELLFSGFFNE 963
>DICTYBASE|DDB_G0275633 [details] [associations]
symbol:DDB_G0275633 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
Length = 1128
Score = 253 (94.1 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 52/96 (54%), Positives = 70/96 (72%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETF++G+NMPA+TV F S RK+DG R ++ EYIQM+GRAGRRGLDE G VI+M
Sbjct: 552 LFATETFSIGLNMPAKTVIFTSVRKFDGEGMRWISGGEYIQMSGRAGRRGLDERGIVILM 611
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ A K M+ G+ +L S F + Y+M+LN+
Sbjct: 612 VDEKMEPAIA-KGMVKGQADRLTSSFWIGYSMLLNM 646
Score = 44 (20.5 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 2 AHTWPFELDVFQ 13
A T+PF+LD FQ
Sbjct: 205 ARTYPFKLDPFQ 216
Score = 36 (17.7 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 138 QKNK--EDLAQLEAKVRQGGEV 157
+KN+ +++ QL+ +++ G EV
Sbjct: 904 KKNEITKEIKQLQKQIKSGDEV 925
>UNIPROTKB|G3MYJ7 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 EMBL:DAAA02050346 EMBL:DAAA02050343
EMBL:DAAA02050344 EMBL:DAAA02050345 Ensembl:ENSBTAT00000064767
Uniprot:G3MYJ7
Length = 605
Score = 261 (96.9 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 53/96 (55%), Positives = 69/96 (71%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RK+DG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 477 LFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 536
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ K+++ G L S F LTY M+LNL
Sbjct: 537 VDEKMSPTIG-KQLLKGSADPLNSAFHLTYNMVLNL 571
Score = 40 (19.1 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 2 AHTWPFELDVFQKQIL 17
A +PF LD FQ++ +
Sbjct: 131 AKEYPFILDAFQREAI 146
>UNIPROTKB|G4NH56 [details] [associations]
symbol:MGG_03931 "FRQ-interacting RNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
Length = 1102
Score = 279 (103.3 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 74/201 (36%), Positives = 111/201 (55%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETF++G+NMPA+TV F +K+DG + R L P+EYIQM+GRAGRRGLD+ G VI
Sbjct: 524 KVLFATETFSIGLNMPAKTVVFSQVKKFDGVKERPLTPSEYIQMSGRAGRRGLDDRGIVI 583
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
+M ++L + A K M+ G+Q +L S F L Y MILNL F +F
Sbjct: 584 MMIDDKLDPETA-KGMVCGQQDRLNSAFHLGYNMILNLQRIETVSPQYMLERCFYQF--- 639
Query: 135 FRMQKNKEDLAQLEAKVRQGGEVRQAQDTDVLFENFFDQAKRFFEIR---DSYMSLVEKT 191
+N + LE K+ E++Q +D V+ + K + +R ++Y +E
Sbjct: 640 ----QNASSVPALEKKLI---ELQQQRDAMVIPDE--STVKDYHTVRQQIEAYKKDMEAV 690
Query: 192 AEFKNAIV----PGIVLHIWT 208
+ N + PG ++ I T
Sbjct: 691 IQHPNNCLEFMQPGRLIRIKT 711
>MGI|MGI:1919448 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
Length = 1040
Score = 265 (98.3 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 54/96 (56%), Positives = 69/96 (71%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RKYDG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 477 LFATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 536
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ K+++ G L S F LTY M+LNL
Sbjct: 537 VDEKMSPTIG-KQLLKGSADPLNSAFHLTYNMVLNL 571
Score = 40 (19.1 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 2 AHTWPFELDVFQKQIL 17
A +PF LD FQ++ +
Sbjct: 131 AKEYPFILDAFQREAI 146
>POMBASE|SPAC6F12.16c [details] [associations]
symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
pre-mRNA with aberrant 3'-ends at the site of transcription"
evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
NextBio:20802732 GO:GO:0071049 Uniprot:O14232
Length = 1117
Score = 262 (97.3 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 60/139 (43%), Positives = 86/139 (61%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++LFATETF++G+NMPA+TV F + RK+DG R ++ EYIQM+GRAGRRGLD+ G VI
Sbjct: 545 KVLFATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLDDRGIVI 604
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
+M E++ A K M+ G+ +L S F L+Y MILNL F +F
Sbjct: 605 LMIDEKMDPPVA-KSMLKGEADRLDSAFHLSYNMILNLLRVEGISPEFMLERCFFQF--- 660
Query: 135 FRMQKNKEDLAQLEAKVRQ 153
+N ++ +LEAK+ +
Sbjct: 661 ----QNSLEVPKLEAKLEE 675
Score = 42 (19.8 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 2 AHTWPFELDVFQ 13
A T+PF LD FQ
Sbjct: 192 ARTYPFTLDPFQ 203
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 261 (96.9 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 53/96 (55%), Positives = 69/96 (71%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RK+DG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 477 LFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 536
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ K+++ G L S F LTY M+LNL
Sbjct: 537 VDEKMSPTIG-KQLLKGSADPLNSAFHLTYNMVLNL 571
Score = 40 (19.1 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 2 AHTWPFELDVFQKQIL 17
A +PF LD FQ++ +
Sbjct: 131 AKEYPFILDAFQREAI 146
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 261 (96.9 bits), Expect = 9.9e-23, Sum P(2) = 9.9e-23
Identities = 53/96 (55%), Positives = 69/96 (71%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RK+DG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 378 LFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 437
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ K+++ G L S F LTY M+LNL
Sbjct: 438 VDEKMSPTIG-KQLLKGSADPLNSAFHLTYNMVLNL 472
Score = 40 (19.1 bits), Expect = 9.9e-23, Sum P(2) = 9.9e-23
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 2 AHTWPFELDVFQKQIL 17
A +PF LD FQ++ +
Sbjct: 32 AKEYPFILDAFQREAI 47
>UNIPROTKB|E2RCI5 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
KEGG:cfa:607950 Uniprot:E2RCI5
Length = 1042
Score = 261 (96.9 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 53/96 (55%), Positives = 69/96 (71%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RK+DG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 479 LFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 538
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ K+++ G L S F LTY M+LNL
Sbjct: 539 VDEKMSPTIG-KQLLKGSADPLNSAFHLTYNMVLNL 573
Score = 40 (19.1 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 2 AHTWPFELDVFQKQIL 17
A +PF LD FQ++ +
Sbjct: 133 AKEYPFILDAFQREAI 148
>UNIPROTKB|P42285 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
Length = 1042
Score = 261 (96.9 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 53/96 (55%), Positives = 69/96 (71%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RK+DG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 479 LFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 538
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ K+++ G L S F LTY M+LNL
Sbjct: 539 VDEKMSPTIG-KQLLKGSADPLNSAFHLTYNMVLNL 573
Score = 40 (19.1 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 2 AHTWPFELDVFQKQIL 17
A +PF LD FQ++ +
Sbjct: 133 AKEYPFILDAFQREAI 148
>UNIPROTKB|F1SLL6 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
Uniprot:F1SLL6
Length = 1046
Score = 261 (96.9 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 53/96 (55%), Positives = 69/96 (71%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RK+DG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 480 LFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 539
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ K+++ G L S F LTY M+LNL
Sbjct: 540 VDEKMSPTIG-KQLLKGSADPLNSAFHLTYNMVLNL 574
Score = 40 (19.1 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 2 AHTWPFELDVFQKQIL 17
A +PF LD FQ++ +
Sbjct: 134 AKEYPFILDAFQREAI 149
>TAIR|locus:2026001 [details] [associations]
symbol:MTR4 "homolog of yeast MTR4" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0030422 "production of
siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
Genevestigator:Q9XIF2 Uniprot:Q9XIF2
Length = 988
Score = 244 (91.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETF++G+NMPA+TV F + RK+DG + R L+ EYIQM+GRAGRRG+D+ G I+M
Sbjct: 413 LFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGICILM 472
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILN 111
E++ A K M+ G L S F L+Y M+LN
Sbjct: 473 VDEKMEPAVA-KSMLKGSADSLNSAFHLSYNMLLN 506
Score = 38 (18.4 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 131 FGSRFRMQKNKEDLAQLEAKV---RQGGEVRQAQDTDVLFENFFDQAKRFFEIR 181
F F+ K +E ++ L V R + ++ D+LF D A+R E++
Sbjct: 839 FSGIFKDAKVEELVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTARRVAEVQ 892
Score = 37 (18.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 2 AHTWPFELDVFQKQIL 17
A +PF LD FQ + +
Sbjct: 61 AKDFPFTLDSFQSEAI 76
>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
symbol:skiv2l2 "superkiller viralicidic activity
2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
Bgee:Q6P7X6 Uniprot:Q6P7X6
Length = 1034
Score = 266 (98.7 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 55/96 (57%), Positives = 68/96 (70%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F S RK+DG + R ++ EYIQM+GRAGRRG+DE G VI M
Sbjct: 472 LFATETFAMGINMPARTVLFTSARKFDGKDFRWISSGEYIQMSGRAGRRGMDERGIVIFM 531
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ K+++ G L S F LTY M+LNL
Sbjct: 532 VDEKMSPAVG-KQLLKGSADPLNSAFHLTYNMVLNL 566
>FB|FBgn0001986 [details] [associations]
symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
Uniprot:Q9Y134
Length = 1055
Score = 259 (96.2 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 54/96 (56%), Positives = 69/96 (71%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RK+DG + R ++ EYIQMAGRAGRRGLD+ G VI+M
Sbjct: 495 LFATETFAMGLNMPARTVLFTAPRKFDGKKFRWISSGEYIQMAGRAGRRGLDDKGIVILM 554
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ + ++ GK + S F LTY M+LNL
Sbjct: 555 IDEKVSPAVG-RDIVQGKADPINSAFHLTYNMVLNL 589
>UNIPROTKB|F1N993 [details] [associations]
symbol:F1N993 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000178 "exosome (RNase
complex)" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0000178 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000460
GO:GO:0008026 GeneTree:ENSGT00690000102230 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 EMBL:AADN02054537 EMBL:AADN02054530
EMBL:AADN02054531 EMBL:AADN02054532 EMBL:AADN02054533
EMBL:AADN02054534 EMBL:AADN02054535 EMBL:AADN02054536
IPI:IPI00599020 Ensembl:ENSGALT00000023719 Uniprot:F1N993
Length = 1031
Score = 258 (95.9 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 53/96 (55%), Positives = 68/96 (70%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F S K+DG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 468 LFATETFAMGINMPARTVLFTSASKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 527
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E++ K+++ G L S F LTY M+LNL
Sbjct: 528 VDEKMSPTIG-KQLLKGSADPLNSAFHLTYNMVLNL 562
>POMBASE|SPAC17H9.02 [details] [associations]
symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
[GO:0043630 "ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
[GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
the site of transcription" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
Uniprot:O13799
Length = 1030
Score = 252 (93.8 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 61/180 (33%), Positives = 98/180 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
+ILFATETF++G+NMPARTV F +K+ G+ R L EY+QM+GRAGRRG+D G I
Sbjct: 461 RILFATETFSIGLNMPARTVLFTKAQKFSGNNFRWLTSGEYMQMSGRAGRRGIDTKGLSI 520
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
++ + + ++A + +M G+ L S F L+Y MILNL F +F +
Sbjct: 521 VILDQSID-EQAARCLMNGQADVLNSAFHLSYGMILNLMRIEEISPEDILKKSFYQFQNM 579
Query: 135 FRMQKNKEDLAQL---EAKVRQGGE--VRQAQDTDVLFENFFDQAKRFFEIRDSYMSLVE 189
+ KE+L QL E + E V++ D + E + ++ ++ D+ + ++
Sbjct: 580 ESLPLIKEELMQLKNEETSINIPNETAVKEFHDLKLQLEKYGEEIQKVMTHPDNCLPYLQ 639
>UNIPROTKB|F1MAH7 [details] [associations]
symbol:F1MAH7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
Length = 1046
Score = 250 (93.1 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 54/97 (55%), Positives = 70/97 (72%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RKYDG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 479 LFATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 538
Query: 77 CKEEL-P--GQEALKKMMLGKQTKLVSQFRLTYAMIL 110
E++ P G++ LKK G+ KL + F L Y +L
Sbjct: 539 VDEKMSPTIGKQLLKK---GQGDKLSAAFYLVYVHLL 572
>UNIPROTKB|D4AE49 [details] [associations]
symbol:D4AE49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
ArrayExpress:D4AE49 Uniprot:D4AE49
Length = 764
Score = 240 (89.5 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 52/93 (55%), Positives = 67/93 (72%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
LFATETFAMG+NMPARTV F + RKYDG + R ++ EYIQM+GRAGRRG+D+ G VI+M
Sbjct: 223 LFATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 282
Query: 77 CKEEL-P--GQEALKKMMLGKQTKLVSQFRLTY 106
E++ P G++ LKK G+ KL + L Y
Sbjct: 283 VDEKMSPTIGKQLLKK---GQGDKLSATHALVY 312
>TAIR|locus:2020573 [details] [associations]
symbol:EMB25 "EMBRYO DEFECTIVE 25" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0010497 "plasmodesmata-mediated intercellular
transport" evidence=NAS;IMP] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0016441 "posttranscriptional gene silencing"
evidence=IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009570 GO:GO:0003676
GO:GO:0009793 GO:GO:0031047 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0008026 EMBL:AC002062
GO:GO:0003724 GO:GO:0010497 eggNOG:COG4581 GO:GO:0016441
HOGENOM:HOG000245391 EMBL:AK316759 EMBL:AF387007 IPI:IPI00538730
PIR:D96723 RefSeq:NP_177164.1 UniGene:At.35348
ProteinModelPortal:B9DFG3 SMR:B9DFG3 PaxDb:B9DFG3 PRIDE:B9DFG3
EnsemblPlants:AT1G70070.1 GeneID:843343 KEGG:ath:AT1G70070
GeneFarm:2280 TAIR:At1g70070 InParanoid:Q94EZ6 OMA:PSYGMVL
PhylomeDB:B9DFG3 ProtClustDB:CLSN2682754 Genevestigator:B9DFG3
Uniprot:B9DFG3
Length = 1171
Score = 231 (86.4 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 54/113 (47%), Positives = 70/113 (61%)
Query: 5 WP-FELDVFQK---QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAG 60
W F ++FQ+ +++FATET A G+NMPART S K G+ER +L P E QMAG
Sbjct: 509 WKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKKAGNERIELGPNELYQMAG 568
Query: 61 RAGRRGLDESG-TVIIMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
RAGRRG+DE G TV++ E G E K++ LVSQF +Y M+LNL
Sbjct: 569 RAGRRGIDEKGYTVLVQTAFE--GAEECCKLVFAGVKPLVSQFTASYGMVLNL 619
>UNIPROTKB|Q10701 [details] [associations]
symbol:helY "Probable helicase HelY" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842578 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:G70767 RefSeq:NP_216608.1 RefSeq:NP_336620.1
RefSeq:YP_006515507.1 ProteinModelPortal:Q10701 SMR:Q10701
PRIDE:Q10701 EnsemblBacteria:EBMYCT00000003887
EnsemblBacteria:EBMYCT00000069683 GeneID:13316898 GeneID:887736
GeneID:924573 KEGG:mtc:MT2153 KEGG:mtu:Rv2092c KEGG:mtv:RVBD_2092c
PATRIC:18126496 TubercuList:Rv2092c HOGENOM:HOG000245391 KO:K03727
OMA:ANESAWQ ProtClustDB:CLSK791623 Uniprot:Q10701
Length = 906
Score = 190 (71.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVIIM 76
+FATET A+G+NMPARTV + K++G + L P EY Q+ GRAGRRG+D G +++
Sbjct: 367 VFATETLALGINMPARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVI 426
Query: 77 CKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
E+ E + + + L S F +Y M +NL
Sbjct: 427 WHPEIEPSE-VAGLASTRTFPLRSSFAPSYNMTINL 461
>ZFIN|ZDB-GENE-061207-43 [details] [associations]
symbol:hfm1 "HFM1, ATP-dependent DNA helicase
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-061207-43 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 EMBL:BX927353 EMBL:CABZ01046504
IPI:IPI00897259 ProteinModelPortal:F1QWJ0
Ensembl:ENSDART00000099851 Bgee:F1QWJ0 Uniprot:F1QWJ0
Length = 1049
Score = 143 (55.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+LF T T AMGVNMPA V ST Y G + + A+ +QM GRAGR D + T +I
Sbjct: 339 VLFTTSTLAMGVNMPAHLVVIKSTMHYVGGACEEYSEADLLQMIGRAGRPQFDTTATAVI 398
Query: 76 MCKEE 80
M + +
Sbjct: 399 MTRPQ 403
>WB|WBGene00016194 [details] [associations]
symbol:C28H8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0004427 "inorganic diphosphatase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006796 "phosphate-containing compound metabolic process"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 EMBL:FO080703
eggNOG:COG4581 GeneTree:ENSGT00690000102154 PIR:A88470
RefSeq:NP_498283.1 ProteinModelPortal:Q09475 SMR:Q09475
STRING:Q09475 PaxDb:Q09475 EnsemblMetazoa:C28H8.3.1
EnsemblMetazoa:C28H8.3.2 GeneID:175834 KEGG:cel:CELE_C28H8.3
UCSC:C28H8.3.1 CTD:175834 WormBase:C28H8.3 HOGENOM:HOG000018763
InParanoid:Q09475 OMA:YARFRNK NextBio:889866 Uniprot:Q09475
Length = 1714
Score = 143 (55.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 36/97 (37%), Positives = 52/97 (53%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+LF+T T ++GVNMP +TV F G + L P Y QM+GRAGRRG D SG VI
Sbjct: 1308 VLFSTSTLSLGVNMPCKTVMF-------GVDTLQLTPLLYRQMSGRAGRRGFDHSGNVIF 1360
Query: 76 MCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
M +P + +++++ + L T +L L
Sbjct: 1361 M---SIPTSK-VRRLLTASLSNLQGNPPFTVLFLLRL 1393
>RGD|1584010 [details] [associations]
symbol:Hfm1 "HFM1, ATP-dependent DNA helicase homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1584010 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 IPI:IPI00766186
Ensembl:ENSRNOT00000033794 UCSC:RGD:1584010 Uniprot:F1LWY1
Length = 954
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+LF T T AMGVN+PA V ST Y G + + + +QM GRAGR D + T +I
Sbjct: 339 VLFTTSTLAMGVNLPAHLVVIKSTMHYTGGAFEEYSETDILQMIGRAGRPQFDTTATAVI 398
Query: 76 MCKEELPGQEALKKMMLGKQT 96
M + L +E +M+ T
Sbjct: 399 MTR--LSTREKYVQMLACNDT 417
>SGD|S000003503 [details] [associations]
symbol:SLH1 "Putative RNA helicase related to Ski2p"
species:4932 "Saccharomyces cerevisiae" [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA;IGI;IMP] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0002181
"cytoplasmic translation" evidence=IGI] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SGD:S000003503 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 EMBL:BK006941 GO:GO:0003676 GO:GO:0051607
GO:GO:0002181 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003724 KO:K02201
RefSeq:NP_011793.3 GeneID:853194 KEGG:sce:YGR277C OMA:RKPTGEG
OrthoDB:EOG4H75KM RefSeq:NP_011787.4 GeneID:853187 KEGG:sce:YGR271W
EMBL:U35242 EMBL:Z73056 PIR:S64604 DIP:DIP-5563N IntAct:P53327
MINT:MINT-516762 STRING:P53327 PaxDb:P53327 PeptideAtlas:P53327
EnsemblFungi:YGR271W CYGD:YGR271w NextBio:973332
Genevestigator:P53327 GermOnline:YGR271W Uniprot:P53327
Length = 1967
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 33/74 (44%), Positives = 43/74 (58%)
Query: 11 VFQK---QILFATETFAMGVNMPARTVAFDSTRKYDGSER--RDLNPAEYIQMAGRAGRR 65
+FQK QIL AT T A GVN+PA V T+ +D RD++ + +QM GRAGR
Sbjct: 1449 LFQKNKIQILIATSTLAWGVNLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRP 1508
Query: 66 GLDESGTVIIMCKE 79
D +GT I+ KE
Sbjct: 1509 AYDTTGTAIVYTKE 1522
>TAIR|locus:2130235 [details] [associations]
symbol:ATSUV3 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;IDA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016070 "RNA metabolic process" evidence=IDA]
[GO:0009561 "megagametogenesis" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005739 GO:GO:0005524 EMBL:CP002687 GO:GO:0009555
GO:GO:0003676 GO:GO:0009561 GO:GO:0016070 GO:GO:0004004
EMBL:AY139995 EMBL:BT008910 EMBL:AJ132843 IPI:IPI00542855
PIR:T52576 RefSeq:NP_193215.2 UniGene:At.509
ProteinModelPortal:Q9SMX1 SMR:Q9SMX1 PRIDE:Q9SMX1
EnsemblPlants:AT4G14790.1 GeneID:827134 KEGG:ath:AT4G14790
TAIR:At4g14790 InParanoid:Q9SMX1 OMA:ASQKSIC PhylomeDB:Q9SMX1
ProtClustDB:CLSN2687511 Genevestigator:Q9SMX1 Uniprot:Q9SMX1
Length = 571
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGR-RGLDESGTVI 74
+L A++ MG+N+ + F + +KYDGSE RDL +E Q+AGRAGR + G V
Sbjct: 306 VLVASDAIGMGLNLNISRIIFSTLQKYDGSETRDLTVSEIKQIAGRAGRFQSKFPIGEVT 365
Query: 75 IMCKEELP 82
+ KE+LP
Sbjct: 366 CLHKEDLP 373
>DICTYBASE|DDB_G0279107 [details] [associations]
symbol:DDB_G0279107 "Helicase POLQ-like"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0279107 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000027 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 SUPFAM:SSF47794 GO:GO:0008026 RefSeq:XP_641869.1
ProteinModelPortal:Q54X98 EnsemblProtists:DDB0205039 GeneID:8621875
KEGG:ddi:DDB_G0279107 InParanoid:Q54X98 OMA:LTNDERE
ProtClustDB:CLSZ2430718 Uniprot:Q54X98
Length = 1238
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/85 (42%), Positives = 46/85 (54%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+L AT T + GVN+PAR V S R G R L+ Y QM GRAGR G+DE G I+
Sbjct: 770 VLCATSTLSTGVNLPARRVILRSPRM--G--RNVLDIRSYRQMVGRAGRAGIDEFGESIL 825
Query: 76 MCKEELPGQEALKKMMLGKQTKLVS 100
MC P + KK++ L+S
Sbjct: 826 MCDHFAP--DKAKKLLTSPMDPLLS 848
>UNIPROTKB|E2RA34 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 CTD:164045
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823 RefSeq:XP_537081.3
Ensembl:ENSCAFT00000032148 GeneID:479956 KEGG:cfa:479956
Uniprot:E2RA34
Length = 1437
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+LF T T AMGVN+PA V ST Y G + + + +QM GRAGR D + T +I
Sbjct: 610 VLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVI 669
Query: 76 MCK 78
M +
Sbjct: 670 MTR 672
>UNIPROTKB|F1MFR1 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:DAAA02007913 EMBL:DAAA02007914
EMBL:DAAA02007915 EMBL:DAAA02007916 IPI:IPI00839892
Ensembl:ENSBTAT00000027789 Uniprot:F1MFR1
Length = 1438
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+LF T T AMGVN+PA V ST Y G + + + +QM GRAGR D + T +I
Sbjct: 612 VLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVI 671
Query: 76 MCK 78
M +
Sbjct: 672 MTR 674
>UNIPROTKB|E2R5U9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823
Ensembl:ENSCAFT00000035369 Uniprot:E2R5U9
Length = 1466
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+LF T T AMGVN+PA V ST Y G + + + +QM GRAGR D + T +I
Sbjct: 610 VLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVI 669
Query: 76 MCK 78
M +
Sbjct: 670 MTR 672
>DICTYBASE|DDB_G0290389 [details] [associations]
symbol:ascc3 "activating signal cointegrator 1
complex subunit" species:44689 "Dictyostelium discoideum"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 dictyBase:DDB_G0290389 GO:GO:0005524
GO:GO:0006355 GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AAFI02000163 RefSeq:XP_635715.1
ProteinModelPortal:Q54G57 EnsemblProtists:DDB0233132 GeneID:8627633
KEGG:ddi:DDB_G0290389 InParanoid:Q54G57 KO:K15271
ProtClustDB:CLSZ2429672 Uniprot:Q54G57
Length = 2195
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
QIL +T T A GVN+PA V T +DG +R D + +QM GRAGR D+ G
Sbjct: 1640 QILISTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDFPLTDVLQMIGRAGRPQFDKEGK 1699
Query: 73 VIIMCKEELPGQEALKKMM 91
++M E P ++ KK +
Sbjct: 1700 AMVMVHE--PKKQFYKKFL 1716
>UNIPROTKB|E2QVY0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005794
GO:GO:0006307 GO:GO:0008283 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 Ensembl:ENSCAFT00000005717
Uniprot:E2QVY0
Length = 1925
Score = 134 (52.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 29/64 (45%), Positives = 35/64 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L AT T A GVN PA V T YDG RR D + +QM GRAGR D+ G
Sbjct: 1641 QVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGK 1700
Query: 73 VIIM 76
+I+
Sbjct: 1701 AVIL 1704
>WB|WBGene00012896 [details] [associations]
symbol:snrp-200 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272 KO:K12854
OMA:KWDVLSR GO:GO:0008026 EMBL:AL110485 RefSeq:NP_496710.1
ProteinModelPortal:Q9U2G0 SMR:Q9U2G0 IntAct:Q9U2G0
MINT:MINT-1062451 STRING:Q9U2G0 PaxDb:Q9U2G0
EnsemblMetazoa:Y46G5A.4 GeneID:174901 KEGG:cel:CELE_Y46G5A.4
UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4 InParanoid:Q9U2G0
NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 134 (52.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 36/94 (38%), Positives = 53/94 (56%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+LF+T T A GVN+PA TV T+ Y+ + R +L + +QM GRAGR D+ G
Sbjct: 800 QVLFSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGE 859
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQFRLT 105
++I EL +L L ++++VS RLT
Sbjct: 860 GILITNHSELQYYLSLMNQQLPVESQMVS--RLT 891
>UNIPROTKB|Q9U2G0 [details] [associations]
symbol:Y46G5A.4 "Putative U5 small nuclear
ribonucleoprotein 200 kDa helicase" species:6239 "Caenorhabditis
elegans" [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0018991 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
EMBL:AL110485 RefSeq:NP_496710.1 ProteinModelPortal:Q9U2G0
SMR:Q9U2G0 IntAct:Q9U2G0 MINT:MINT-1062451 STRING:Q9U2G0
PaxDb:Q9U2G0 EnsemblMetazoa:Y46G5A.4 GeneID:174901
KEGG:cel:CELE_Y46G5A.4 UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4
InParanoid:Q9U2G0 NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 134 (52.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 36/94 (38%), Positives = 53/94 (56%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+LF+T T A GVN+PA TV T+ Y+ + R +L + +QM GRAGR D+ G
Sbjct: 800 QVLFSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGE 859
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQFRLT 105
++I EL +L L ++++VS RLT
Sbjct: 860 GILITNHSELQYYLSLMNQQLPVESQMVS--RLT 891
>RGD|1307995 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex subunit
3" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 RGD:1307995 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 IPI:IPI01016410 UniGene:Rn.24209
Ensembl:ENSRNOT00000057016 UCSC:RGD:1307995
GeneTree:ENSGT00640000091272 ArrayExpress:F1LPQ2 Uniprot:F1LPQ2
Length = 2197
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/64 (45%), Positives = 35/64 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L AT T A GVN PA V T YDG RR D + +QM GRAGR D+ G
Sbjct: 1641 QVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGK 1700
Query: 73 VIIM 76
+I+
Sbjct: 1701 AVIL 1704
>MGI|MGI:1925237 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex
subunit 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 MGI:MGI:1925237 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529
OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC137877 EMBL:AC153529
EMBL:AC159114 EMBL:BC032189 EMBL:BC059917 EMBL:AK021027
EMBL:AK052745 IPI:IPI00553687 RefSeq:NP_932124.2 UniGene:Mm.222497
PRIDE:E9PZJ8 Ensembl:ENSMUST00000035606 GeneID:77987 KEGG:mmu:77987
HOGENOM:HOG000157749 NextBio:347945 Bgee:E9PZJ8 Uniprot:E9PZJ8
Length = 2198
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/64 (45%), Positives = 35/64 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L AT T A GVN PA V T YDG RR D + +QM GRAGR D+ G
Sbjct: 1642 QVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGK 1701
Query: 73 VIIM 76
+I+
Sbjct: 1702 AVIL 1705
>UNIPROTKB|E1BNG3 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9913 "Bos taurus" [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:DAAA02026160 EMBL:DAAA02026161
EMBL:DAAA02026162 EMBL:DAAA02026163 EMBL:DAAA02026164
EMBL:DAAA02026165 EMBL:DAAA02026166 EMBL:DAAA02026167
EMBL:DAAA02026168 EMBL:DAAA02026169 EMBL:DAAA02026170
EMBL:DAAA02026171 EMBL:DAAA02026172 EMBL:DAAA02026173
EMBL:DAAA02026174 EMBL:DAAA02026175 EMBL:DAAA02026176
EMBL:DAAA02026177 EMBL:DAAA02026178 EMBL:DAAA02026179
EMBL:DAAA02026180 EMBL:DAAA02026181 EMBL:DAAA02026182
EMBL:DAAA02026183 EMBL:DAAA02026184 EMBL:DAAA02026185
EMBL:DAAA02026186 EMBL:DAAA02026187 EMBL:DAAA02026188
EMBL:DAAA02026189 EMBL:DAAA02026190 EMBL:DAAA02026191
EMBL:DAAA02026192 EMBL:DAAA02026193 EMBL:DAAA02026194
EMBL:DAAA02026195 EMBL:DAAA02026196 EMBL:DAAA02026197
EMBL:DAAA02026198 EMBL:DAAA02026199 IPI:IPI00689177
RefSeq:NP_001193047.1 UniGene:Bt.26262 PRIDE:E1BNG3
Ensembl:ENSBTAT00000027294 GeneID:538416 KEGG:bta:538416 CTD:10973
GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC NextBio:20877349
GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 Uniprot:E1BNG3
Length = 2201
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/64 (45%), Positives = 35/64 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L AT T A GVN PA V T YDG RR D + +QM GRAGR D+ G
Sbjct: 1641 QVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGK 1700
Query: 73 VIIM 76
+I+
Sbjct: 1701 AVIL 1704
>UNIPROTKB|F6Y2F0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 GO:GO:0008026
Ensembl:ENSCAFT00000005717 EMBL:AAEX03008562 RefSeq:XP_854167.1
ProteinModelPortal:F6Y2F0 GeneID:475008 KEGG:cfa:475008 OMA:XAVYIAP
Uniprot:F6Y2F0
Length = 2202
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/64 (45%), Positives = 35/64 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L AT T A GVN PA V T YDG RR D + +QM GRAGR D+ G
Sbjct: 1641 QVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGK 1700
Query: 73 VIIM 76
+I+
Sbjct: 1701 AVIL 1704
>UNIPROTKB|Q8N3C0 [details] [associations]
symbol:ASCC3 "Activating signal cointegrator 1 complex
subunit 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=IDA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006307
GO:GO:0008283 EMBL:CH471051 GO:GO:0006351 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 CTD:10973
KO:K01529 OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AL834463 EMBL:AK315197
EMBL:AL591585 EMBL:AL121965 EMBL:AL133338 EMBL:AL356122 EMBL:Z86062
EMBL:BC050681 EMBL:BC125211 EMBL:BC125212 EMBL:BC026066
EMBL:AY013288 EMBL:AJ223948 IPI:IPI00430472 RefSeq:NP_006819.2
RefSeq:NP_071374.1 UniGene:Hs.486031 ProteinModelPortal:Q8N3C0
SMR:Q8N3C0 IntAct:Q8N3C0 MINT:MINT-1183138 STRING:Q8N3C0
PhosphoSite:Q8N3C0 DMDM:158518649 PaxDb:Q8N3C0 PRIDE:Q8N3C0
DNASU:10973 Ensembl:ENST00000369143 Ensembl:ENST00000369162
Ensembl:ENST00000522650 GeneID:10973 KEGG:hsa:10973 UCSC:uc003pqk.3
GeneCards:GC06M100956 H-InvDB:HIX0021958 HGNC:HGNC:18697
HPA:HPA031608 HPA:HPA031609 HPA:HPA031610 MIM:614217
neXtProt:NX_Q8N3C0 PharmGKB:PA134890913 eggNOG:COG1204
HOGENOM:HOG000152625 HOVERGEN:HBG051896 InParanoid:Q8N3C0
PhylomeDB:Q8N3C0 ChiTaRS:ASCC3 GenomeRNAi:10973 NextBio:41694
ArrayExpress:Q8N3C0 Bgee:Q8N3C0 CleanEx:HS_ASCC3
Genevestigator:Q8N3C0 GermOnline:ENSG00000112249 Uniprot:Q8N3C0
Length = 2202
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/64 (45%), Positives = 35/64 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L AT T A GVN PA V T YDG RR D + +QM GRAGR D+ G
Sbjct: 1641 QVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGK 1700
Query: 73 VIIM 76
+I+
Sbjct: 1701 AVIL 1704
>CGD|CAL0003134 [details] [associations]
symbol:orf19.3980 species:5476 "Candida albicans" [GO:0042788
"polysomal ribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 CGD:CAL0003134 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721889.1 RefSeq:XP_722050.1 ProteinModelPortal:Q5AK41
STRING:Q5AK41 GeneID:3636313 GeneID:3636419 KEGG:cal:CaO19.11463
KEGG:cal:CaO19.3980 Uniprot:Q5AK41
Length = 1929
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/67 (44%), Positives = 38/67 (56%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSER--RDLNPAEYIQMAGRAGRRGLDESGT 72
QIL AT T A GVN+PA V T+ +D RD++ + +QM GRAGR D SG
Sbjct: 1428 QILIATSTLAWGVNLPAHLVIIKGTQFFDAKIEAYRDMDLTDILQMMGRAGRPAYDTSGI 1487
Query: 73 VIIMCKE 79
I+ KE
Sbjct: 1488 AIVYTKE 1494
>UNIPROTKB|A6NGI5 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00973
GO:GO:0008026 EMBL:BX323048 EMBL:AC098691 HGNC:HGNC:20193
HOGENOM:HOG000293238 HOVERGEN:HBG103774 ChiTaRS:HFM1
IPI:IPI00852573 ProteinModelPortal:A6NGI5 STRING:A6NGI5
Ensembl:ENST00000370424 ArrayExpress:A6NGI5 Bgee:A6NGI5
Uniprot:A6NGI5
Length = 1114
Score = 134 (52.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+LF T T AMGVN+PA V ST Y G + + + +QM GRAGR D + T +I
Sbjct: 288 VLFTTSTLAMGVNLPAHLVVIKSTMHYAGGLFEEYSETDILQMIGRAGRPQFDTTATAVI 347
Query: 76 MCK 78
M +
Sbjct: 348 MTR 350
Score = 35 (17.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 129 KEFGSRFRMQKNKE 142
K FG++ MQ+ E
Sbjct: 777 KRFGNQITMQRKSE 790
>UNIPROTKB|F1S4E9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:CU179709
Ensembl:ENSSSCT00000007570 Uniprot:F1S4E9
Length = 1438
Score = 135 (52.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+LF T T AMGVN+PA V ST Y G + + + +QM GRAGR D + T +I
Sbjct: 611 VLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVI 670
Query: 76 MCK 78
M +
Sbjct: 671 MTR 673
Score = 36 (17.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 129 KEFGSRFRMQKNKE 142
K FG++ MQK E
Sbjct: 1099 KRFGNQIIMQKKSE 1112
>UNIPROTKB|H9L351 [details] [associations]
symbol:H9L351 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00640000091272 EMBL:AADN02064073
EMBL:AADN02064074 Ensembl:ENSGALT00000021750
Ensembl:ENSGALT00000036125 Uniprot:H9L351
Length = 254
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y + R +L + +QM GRAGR D G
Sbjct: 67 QVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGE 126
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQ 101
++I EL +L L ++++VS+
Sbjct: 127 GILITSHGELQYYLSLLNQQLPIESQMVSK 156
>UNIPROTKB|F1NTD6 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 KO:K01529 GO:GO:0043140
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
EMBL:AADN02002229 EMBL:AADN02002230 EMBL:AADN02002231
EMBL:AADN02002232 EMBL:AADN02002233 EMBL:AADN02002234
IPI:IPI00590520 RefSeq:XP_419816.1 UniGene:Gga.31679
ProteinModelPortal:F1NTD6 PRIDE:F1NTD6 GeneID:421790
KEGG:gga:421790 Uniprot:F1NTD6
Length = 2211
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/64 (45%), Positives = 35/64 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L AT T A GVN PA V T YDG RR D + +QM GRAGR D+ G
Sbjct: 1650 QVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTRRYVDYPITDVLQMMGRAGRPQFDDQGK 1709
Query: 73 VIIM 76
+I+
Sbjct: 1710 AVIL 1713
>UNIPROTKB|A2PYH4 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0008026 KO:K15271
EMBL:AB204867 EMBL:AK094079 EMBL:BX323048 EMBL:AC098691
IPI:IPI00374013 IPI:IPI00852603 RefSeq:NP_001017975.3
UniGene:Hs.454818 ProteinModelPortal:A2PYH4 SMR:A2PYH4
STRING:A2PYH4 PhosphoSite:A2PYH4 PaxDb:A2PYH4 PRIDE:A2PYH4
Ensembl:ENST00000294696 Ensembl:ENST00000370425 GeneID:164045
KEGG:hsa:164045 UCSC:uc001doa.4 CTD:164045 GeneCards:GC01M091726
HGNC:HGNC:20193 HPA:HPA035557 neXtProt:NX_A2PYH4
PharmGKB:PA142671690 HOGENOM:HOG000293238 HOVERGEN:HBG103774
InParanoid:A2PYH4 OMA:EADEMKS OrthoDB:EOG44XJHC ChiTaRS:HFM1
GenomeRNAi:164045 NextBio:88429 ArrayExpress:A2PYH4 Bgee:A2PYH4
CleanEx:HS_HFM1 Genevestigator:A2PYH4 Uniprot:A2PYH4
Length = 1435
Score = 134 (52.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
+LF T T AMGVN+PA V ST Y G + + + +QM GRAGR D + T +I
Sbjct: 609 VLFTTSTLAMGVNLPAHLVVIKSTMHYAGGLFEEYSETDILQMIGRAGRPQFDTTATAVI 668
Query: 76 MCK 78
M +
Sbjct: 669 MTR 671
Score = 35 (17.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 129 KEFGSRFRMQKNKE 142
K FG++ MQ+ E
Sbjct: 1098 KRFGNQITMQRKSE 1111
>POMBASE|SPAC9.03c [details] [associations]
symbol:brr2 "U5 snRNP complex subunit Brr2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000393 "spliceosomal
conformational changes to generate catalytic conformation"
evidence=IGI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 PomBase:SPAC9.03c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749 PIR:T39188
RefSeq:NP_593346.1 ProteinModelPortal:Q9UT24 IntAct:Q9UT24
STRING:Q9UT24 EnsemblFungi:SPAC9.03c.1 GeneID:2543676
KEGG:spo:SPAC9.03c KO:K12854 OMA:KWDVLSR OrthoDB:EOG4MD17F
NextBio:20804682 GO:GO:0046540 GO:GO:0004004 GO:GO:0000393
Uniprot:Q9UT24
Length = 2176
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/100 (38%), Positives = 52/100 (52%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSER--RDLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y + +L+P + +QM GRAGR D G
Sbjct: 846 QVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGIWTELSPQDVLQMLGRAGRPQFDTYGE 905
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILN 111
+II EL Q L ++ +Q + SQF A LN
Sbjct: 906 GIIITAHSEL--QYYLS--LMNQQLPIESQFMRRLADCLN 941
>FB|FBgn0038344 [details] [associations]
symbol:CG5205 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0006200 GO:GO:0005682 GO:GO:0003676
GO:GO:0004386 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0008026 GO:GO:0016779 FlyBase:FBgn0038344 RefSeq:NP_650472.2
UniGene:Dm.1213 ProteinModelPortal:Q9VF56 SMR:Q9VF56
EnsemblMetazoa:FBtr0083147 GeneID:41891 KEGG:dme:Dmel_CG5205
UCSC:CG5205-RA InParanoid:Q9VF56 PhylomeDB:Q9VF56 GenomeRNAi:41891
NextBio:826131 ArrayExpress:Q9VF56 Bgee:Q9VF56 Uniprot:Q9VF56
Length = 2183
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 8 ELDVFQK-QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGR 64
EL + +K QIL AT T A GVN+PA V T +DG ++ D+ + +QM GRAGR
Sbjct: 1644 ELFLNRKIQILVATATLAWGVNLPAHLVVIKGTEYFDGKVKKYVDMPITDVLQMMGRAGR 1703
Query: 65 RGLDESGTVIIMCKEE 80
D G +++ +E
Sbjct: 1704 PQFDNEGVAVVLVHDE 1719
>TAIR|locus:2059969 [details] [associations]
symbol:AT2G42270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003676 EMBL:AC002561 GO:GO:0030529
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 UniGene:At.12448 UniGene:At.43726 KO:K12854
OMA:RDTHESS GO:GO:0008026 IPI:IPI00539463 PIR:T00936
RefSeq:NP_181756.1 ProteinModelPortal:O48534 SMR:O48534
STRING:O48534 PaxDb:O48534 PRIDE:O48534 EnsemblPlants:AT2G42270.1
GeneID:818828 KEGG:ath:AT2G42270 TAIR:At2g42270 InParanoid:O48534
PhylomeDB:O48534 ProtClustDB:CLSN2679454 ArrayExpress:O48534
Genevestigator:O48534 Uniprot:O48534
Length = 2172
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKY--DGSERRDLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y + E +L+P + +QM GRAGR D+ G
Sbjct: 832 QVLISTATLAWGVNLPAHTVIIKGTQVYNPERGEWMELSPLDVMQMIGRAGRPQYDQQGE 891
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILN 111
+II +L Q L+ ++ +Q + SQF A LN
Sbjct: 892 GIIITGYSKL--QYYLR--LMNEQLPIESQFISKLADQLN 927
>DICTYBASE|DDB_G0270042 [details] [associations]
symbol:ascc3l "U5 small nuclear ribonucleoprotein 200
kDa helicase" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 dictyBase:DDB_G0270042 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 KO:K12854 OMA:KWDVLSR GO:GO:0008026
RefSeq:XP_646493.1 ProteinModelPortal:Q55CI8 STRING:Q55CI8
EnsemblProtists:DDB0233131 GeneID:8617455 KEGG:ddi:DDB_G0270042
InParanoid:Q55CI8 ProtClustDB:CLSZ2431432 Uniprot:Q55CI8
Length = 2237
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR-DLNPAEYIQMAGRAGRRGLDESGT- 72
Q+L +T T A GVN+PA TV T+ Y+ + +L+P + QM GRAGR D+ G
Sbjct: 877 QVLISTATLAWGVNLPAHTVIIKGTQIYNPEKGWCELSPLDVTQMLGRAGRPPFDKEGEG 936
Query: 73 VIIMCKEELPGQEALKKMMLGKQTKLVSQ 101
+II + EL +L L +++ +S+
Sbjct: 937 IIITSQHELQFYLSLLNTQLSIESQFISR 965
>UNIPROTKB|G4MUT4 [details] [associations]
symbol:MGG_01682 "ATP-dependent RNA helicase SUV3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
EMBL:CM001232 RefSeq:XP_003714671.1 ProteinModelPortal:G4MUT4
EnsemblFungi:MGG_01682T0 GeneID:2679359 KEGG:mgr:MGG_01682
Uniprot:G4MUT4
Length = 757
Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 17 LFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGR 64
+ A++ MG+N+ R V FD+T K+DGSERR L +E Q+ GRAGR
Sbjct: 420 IVASDAIGMGLNLEIRRVVFDTTNKFDGSERRFLGESEIKQIGGRAGR 467
>TAIR|locus:2125677 [details] [associations]
symbol:AT4G32700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006260 "DNA replication"
evidence=IEA;IGI] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IGI] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00482 SMART:SM00490 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0006260
GO:GO:0009640 GO:GO:0006310 GO:GO:0010468 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:AB192295 IPI:IPI00570534 RefSeq:NP_001078482.1
UniGene:At.48069 ProteinModelPortal:Q588V7 SMR:Q588V7 STRING:Q588V7
PRIDE:Q588V7 EnsemblPlants:AT4G32700.2 GeneID:829406
KEGG:ath:AT4G32700 TAIR:At4g32700 HOGENOM:HOG000030860
PhylomeDB:Q588V7 ProtClustDB:CLSN2698843 Genevestigator:Q588V7
Uniprot:Q588V7
Length = 2154
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRD-LNPAEYIQMAGRAGRRGLDESGTV 73
++L AT T A GVN+PAR V F + G RD ++ Y QM+GRAGR G+D G
Sbjct: 861 RVLTATSTLAAGVNLPARRVIF--RQPMIG---RDFIDGTRYKQMSGRAGRTGIDTKGDS 915
Query: 74 IIMCKEELPGQEALKKMM 91
+++CK PG+ LK++M
Sbjct: 916 VLICK---PGE--LKRIM 928
>UNIPROTKB|Q5H9U9 [details] [associations]
symbol:DDX60L "Probable ATP-dependent RNA helicase
DDX60-like" species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 HOGENOM:HOG000169263 HOVERGEN:HBG107797
EMBL:AL832950 EMBL:CR933601 EMBL:AC079926 EMBL:AC093888
EMBL:AK055595 IPI:IPI00853133 IPI:IPI00935252 RefSeq:NP_001012985.1
UniGene:Hs.535011 ProteinModelPortal:Q5H9U9 STRING:Q5H9U9
PhosphoSite:Q5H9U9 DMDM:74755482 PaxDb:Q5H9U9 PRIDE:Q5H9U9
Ensembl:ENST00000260184 Ensembl:ENST00000505890
Ensembl:ENST00000511577 GeneID:91351 KEGG:hsa:91351 UCSC:uc003irq.4
CTD:91351 GeneCards:GC04M169277 HGNC:HGNC:26429 HPA:HPA043211
neXtProt:NX_Q5H9U9 PharmGKB:PA162383445 InParanoid:Q5H9U9
OMA:AQDSVYL GenomeRNAi:91351 NextBio:77184 ArrayExpress:Q5H9U9
Bgee:Q5H9U9 CleanEx:HS_DDX60L Genevestigator:Q5H9U9 Uniprot:Q5H9U9
Length = 1706
Score = 128 (50.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
+++ ATET A+G++MP ++V F Y L+ Y QM+GRAGRRG D G V
Sbjct: 1270 RVVTATETLALGIHMPCKSVVFAQDSVY-------LDALNYRQMSGRAGRRGQDLLGNVY 1322
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
++P + +K+++ +L QF L+ ++L L
Sbjct: 1323 FF---DIPLPK-IKRLLASSVPELRGQFPLSITLVLRL 1356
>TAIR|locus:2089144 [details] [associations]
symbol:RCK "ROCK-N-ROLLERS" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA;IMP] [GO:0051026 "chiasma assembly"
evidence=IMP] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007067
"mitosis" evidence=RCA] [GO:0007129 "synapsis" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0007131
GO:GO:0008026 GO:GO:0051026 KO:K15271 EMBL:AY822649 EMBL:AY960701
IPI:IPI00517826 RefSeq:NP_189410.2 UniGene:At.53523
ProteinModelPortal:Q5D892 SMR:Q5D892 STRING:Q5D892 PRIDE:Q5D892
EnsemblPlants:AT3G27730.1 GeneID:822395 KEGG:ath:AT3G27730
TAIR:At3g27730 HOGENOM:HOG000029933 InParanoid:Q5D892 OMA:IMTRRET
PhylomeDB:Q5D892 ProtClustDB:CLSN2699173 Genevestigator:Q5D892
Uniprot:Q5D892
Length = 1133
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q++ T T A G+N+PA TV ST+ ++ + + + + +QM+GRAGR D++G
Sbjct: 362 QVICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMSGRAGRPPFDDTGM 421
Query: 73 VIIMCKEE 80
VIIM + E
Sbjct: 422 VIIMTRRE 429
>ASPGD|ASPL0000051297 [details] [associations]
symbol:AN10194 species:162425 "Emericella nidulans"
[GO:0000393 "spliceosomal conformational changes to generate
catalytic conformation" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:BN001307
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0046540 GO:GO:0000388 GO:GO:0008026
EnsemblFungi:CADANIAT00008099 OMA:AMNEACY Uniprot:C8VMF3
Length = 2208
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L T T A GVN+PA TV T+ Y + +L+P + +QM GRAGR D G
Sbjct: 862 QVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGE 921
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQ 101
+II + E+ +L L +++LVS+
Sbjct: 922 GIIITTQAEIQYYLSLMNQQLPIESQLVSK 951
>UNIPROTKB|F1NMU1 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0006281 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 GO:GO:0003887 GO:GO:0043142 EMBL:AADN02037908
IPI:IPI00584654 Ensembl:ENSGALT00000024072 Uniprot:F1NMU1
Length = 904
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++L AT T + GVN+PAR V T + G+ L+ Y QMAGRAGR+G+D G I
Sbjct: 403 RVLAATSTLSSGVNLPARRVII-RTPMFGGTL---LDVLTYKQMAGRAGRKGVDTEGESI 458
Query: 75 IMCK 78
++CK
Sbjct: 459 LVCK 462
>RGD|1309795 [details] [associations]
symbol:Polq "polymerase (DNA directed), theta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003887 OMA:CFSDESI IPI:IPI00362354
Ensembl:ENSRNOT00000034841 UCSC:RGD:1309795 Uniprot:D4ABI8
Length = 2540
Score = 128 (50.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 37/97 (38%), Positives = 53/97 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++L AT T + GVN+PAR V T + G + L+ Y QM GRAGR+G+D G I
Sbjct: 439 RVLAATSTLSSGVNLPARRVII-RTPVFGG---QPLDILTYKQMVGRAGRKGVDTMGESI 494
Query: 75 IMCK--EELPGQEALKKMMLGKQTKLVSQFRLTYAMI 109
++CK E+ G L+ + + L SQ +T MI
Sbjct: 495 LVCKNSEKSKGIALLQGSLEPVHSCLQSQGEVTSTMI 531
>UNIPROTKB|D4A628 [details] [associations]
symbol:Polq "Polymerase (DNA directed), theta (Predicted),
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
GO:GO:0003887 GO:GO:0043142 CTD:10721 KO:K02349 OrthoDB:EOG42RD6C
EMBL:CH473967 IPI:IPI00949142 RefSeq:NP_001099348.1
UniGene:Rn.131176 Ensembl:ENSRNOT00000063995 GeneID:288079
KEGG:rno:288079 NextBio:627549 Uniprot:D4A628
Length = 2547
Score = 128 (50.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 37/97 (38%), Positives = 53/97 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++L AT T + GVN+PAR V T + G + L+ Y QM GRAGR+G+D G I
Sbjct: 439 RVLAATSTLSSGVNLPARRVII-RTPVFGG---QPLDILTYKQMVGRAGRKGVDTMGESI 494
Query: 75 IMCK--EELPGQEALKKMMLGKQTKLVSQFRLTYAMI 109
++CK E+ G L+ + + L SQ +T MI
Sbjct: 495 LVCKNSEKSKGIALLQGSLEPVHSCLQSQGEVTSTMI 531
>TAIR|locus:2037375 [details] [associations]
symbol:emb1507 "embryo defective 1507" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007126
"meiosis" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 EMBL:CP002684 GO:GO:0005829
GO:GO:0005524 GO:GO:0005730 GO:GO:0016020 GO:GO:0003676
GO:GO:0030529 EMBL:AC007369 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 KO:K12854 OMA:KWDVLSR
GO:GO:0008026 ProtClustDB:CLSN2679454 IPI:IPI00536616 PIR:E86342
RefSeq:NP_001185050.1 RefSeq:NP_173520.1 UniGene:At.11196
UniGene:At.21273 ProteinModelPortal:Q9SYP1 SMR:Q9SYP1 IntAct:Q9SYP1
STRING:Q9SYP1 PRIDE:Q9SYP1 ProMEX:Q9SYP1 EnsemblPlants:AT1G20960.1
EnsemblPlants:AT1G20960.2 GeneID:838690 KEGG:ath:AT1G20960
TAIR:At1g20960 InParanoid:Q9SYP1 PhylomeDB:Q9SYP1
Genevestigator:Q9SYP1 Uniprot:Q9SYP1
Length = 2171
Score = 126 (49.4 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y+ + +L+P + +QM GRAGR D+ G
Sbjct: 831 QVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGAWMELSPLDVMQMLGRAGRPQYDQHGE 890
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILN 111
+II EL Q L ++ +Q + SQF A LN
Sbjct: 891 GIIITGYSEL--QYYLS--LMNEQLPIESQFISKLADQLN 926
>WB|WBGene00021905 [details] [associations]
symbol:helq-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IGI] [GO:0051117 "ATPase
binding" evidence=IPI] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0000712 GO:GO:0017116
OMA:SRPLENC EMBL:FO080183 RefSeq:NP_001022911.1
ProteinModelPortal:H2KY86 SMR:H2KY86 EnsemblMetazoa:Y55B1AL.3a
GeneID:175210 KEGG:cel:CELE_Y55B1AL.3 CTD:175210
WormBase:Y55B1AL.3a Uniprot:H2KY86
Length = 923
Score = 122 (48.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 34/76 (44%), Positives = 42/76 (55%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
++ AT T A GVN+P R V + G ER L A+Y+QMAGRAGR G D G I
Sbjct: 493 VVCATSTLAAGVNLPVRRVIIKAPMV--GRER--LGKAQYLQMAGRAGRAGFDTKGDCIT 548
Query: 76 MCK---EELPGQEALK 88
+ K EE +E LK
Sbjct: 549 IIKAGEEERWFREMLK 564
>RGD|1560014 [details] [associations]
symbol:Ddx60 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 60"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO] [GO:0003725
"double-stranded RNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009615 "response to virus" evidence=ISO] [GO:0051607 "defense
response to virus" evidence=ISO] [GO:1900245 "positive regulation
of MDA-5 signaling pathway" evidence=ISO] [GO:1900246 "positive
regulation of RIG-I signaling pathway" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1560014 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00690000102154 IPI:IPI00358301
Ensembl:ENSRNOT00000019667 Uniprot:F1M4N8
Length = 1304
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
+++ AT T ++G+NMP ++V F Y L+ Y QM+GRAGRRG D G V
Sbjct: 878 RVVTATRTLSLGINMPCKSVVFAQNSVY-------LDALNYRQMSGRAGRRGQDLLGDVY 930
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
++P + + K++ K L QF L+ +IL L
Sbjct: 931 FF---DIPLPK-IGKLIKSKVPDLRGQFPLSITLILRL 964
>UNIPROTKB|F1RIW4 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:1900246 "positive regulation of RIG-I signaling
pathway" evidence=IEA] [GO:1900245 "positive regulation of MDA-5
signaling pathway" evidence=IEA] [GO:0051607 "defense response to
virus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003727 "single-stranded RNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 GO:GO:0003727 GO:GO:0051607
GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 OMA:QDCTYAD GO:GO:1900245 GO:GO:1900246
GeneTree:ENSGT00690000102154 EMBL:AEMK01191618 EMBL:CU469408
Ensembl:ENSSSCT00000010657 Uniprot:F1RIW4
Length = 1705
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
+++ AT T A+G+NMP ++V F Y L+ Y QM+GRAGRRG D G V
Sbjct: 1279 RVVTATGTLALGINMPCKSVVFAQNSIY-------LDALNYRQMSGRAGRRGQDLLGDVY 1331
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
++P + ++K++ +L QF L+ +++L L
Sbjct: 1332 FF---DIPLPK-IEKLIKSNVPQLRGQFPLSISLVLRL 1365
>CGD|CAL0001532 [details] [associations]
symbol:orf19.3098 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000388 "spliceosome conformational change to
release U4 (or U4atac) and U1 (or U11)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001532 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 KO:K12854 GO:GO:0008026 EMBL:AACQ01000086
EMBL:AACQ01000085 RefSeq:XP_715407.1 RefSeq:XP_715477.1
ProteinModelPortal:Q5A0Z8 STRING:Q5A0Z8 GeneID:3642881
GeneID:3642903 KEGG:cal:CaO19.10610 KEGG:cal:CaO19.3098
Uniprot:Q5A0Z8
Length = 1987
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
++L +T T A GVN+PA TV T Y L+P + +QM GRAGR D++G
Sbjct: 692 RVLVSTATLAWGVNLPAHTVIIKGTETYSPESGAWVQLSPQDILQMLGRAGRPRYDKNGE 751
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLV 99
+II ++E+ A+ L +++L+
Sbjct: 752 GIIITSQDEVQYYLAILNQQLPIESQLI 779
>UNIPROTKB|G4N5J1 [details] [associations]
symbol:MGG_06124 "Activating signal cointegrator 1 complex
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 GO:GO:0008026 RefSeq:XP_003711991.1
ProteinModelPortal:G4N5J1 EnsemblFungi:MGG_06124T0 GeneID:2684274
KEGG:mgr:MGG_06124 Uniprot:G4N5J1
Length = 1998
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSER--RDLNPAEYIQMAGRAGRRGLDESGT 72
QIL AT T A GVN+PA V T+ YD +D++ + +QM GRAGR D SG
Sbjct: 1468 QILVATSTLAWGVNLPAHLVVVKGTQFYDAKIEGYKDMDLTDVLQMLGRAGRPQFDNSGV 1527
Query: 73 VIIMCKE 79
I ++
Sbjct: 1528 ARIFTQD 1534
>UNIPROTKB|F1SU44 [details] [associations]
symbol:F1SU44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:CU896688
Ensembl:ENSSSCT00000008903 OMA:NETIATY Uniprot:F1SU44
Length = 1027
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y + R +L + +QM GRAGR D G
Sbjct: 807 QVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGE 866
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQ 101
++I EL +L L ++++V++
Sbjct: 867 GILITSHGELQYYLSLLNQQLPIESQMVAK 896
>UNIPROTKB|E1BH78 [details] [associations]
symbol:LOC100850262 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005682 "U5
snRNP" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
CTD:23020 EMBL:DAAA02030116 IPI:IPI00695338 RefSeq:NP_001193092.1
UniGene:Bt.7486 ProteinModelPortal:E1BH78 PRIDE:E1BH78
Ensembl:ENSBTAT00000001130 GeneID:510529 KEGG:bta:510529
NextBio:20869492 Uniprot:E1BH78
Length = 2136
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y + R +L + +QM GRAGR D G
Sbjct: 807 QVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGE 866
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQ 101
++I EL +L L ++++VS+
Sbjct: 867 GILITSHGELQYYLSLLNQQLPIESQMVSK 896
>UNIPROTKB|O75643 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA;TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000354 "cis assembly of pre-catalytic
spliceosome" evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IDA] [GO:0005682 "U5 snRNP" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005654 Reactome:REACT_1675 GO:GO:0005682 GO:GO:0003676
Orphanet:791 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOVERGEN:HBG051896 KO:K12854
OMA:KWDVLSR GO:GO:0008026 GO:GO:0000354 EMBL:AY572488 EMBL:AK024391
EMBL:AK090671 EMBL:AB018331 EMBL:Z70200 EMBL:BC065924 EMBL:BC007577
IPI:IPI00168235 IPI:IPI00420014 RefSeq:NP_054733.2
UniGene:Hs.246112 PDB:2Q0Z PDB:4F91 PDB:4F92 PDB:4F93 PDBsum:2Q0Z
PDBsum:4F91 PDBsum:4F92 PDBsum:4F93 ProteinModelPortal:O75643
SMR:O75643 IntAct:O75643 MINT:MINT-5003904 STRING:O75643
PhosphoSite:O75643 PaxDb:O75643 PeptideAtlas:O75643 PRIDE:O75643
Ensembl:ENST00000323853 GeneID:23020 KEGG:hsa:23020 UCSC:uc002svu.3
CTD:23020 GeneCards:GC02M096940 H-InvDB:HIX0002273 HGNC:HGNC:30859
HPA:HPA029321 MIM:601664 MIM:610359 neXtProt:NX_O75643
PharmGKB:PA164726004 InParanoid:O75643 OrthoDB:EOG4WM4SS
PhylomeDB:O75643 ChiTaRS:SNRNP200 EvolutionaryTrace:O75643
GenomeRNAi:23020 NextBio:43966 ArrayExpress:O75643 Bgee:O75643
CleanEx:HS_SNRNP200 Genevestigator:O75643
GermOnline:ENSG00000144028 Uniprot:O75643
Length = 2136
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y + R +L + +QM GRAGR D G
Sbjct: 807 QVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGE 866
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQ 101
++I EL +L L ++++VS+
Sbjct: 867 GILITSHGELQYYLSLLNQQLPIESQMVSK 896
>UNIPROTKB|F1LNJ2 [details] [associations]
symbol:Ascc3l1 "Protein Ascc3l1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 OMA:KWDVLSR GO:GO:0008026
IPI:IPI00562876 PRIDE:F1LNJ2 Ensembl:ENSRNOT00000043895
ArrayExpress:F1LNJ2 Uniprot:F1LNJ2
Length = 2139
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y + R +L + +QM GRAGR D G
Sbjct: 807 QVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGE 866
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQ 101
++I EL +L L ++++VS+
Sbjct: 867 GILITSHGELQYYLSLLNQQLPIESQMVSK 896
>FB|FBgn0263599 [details] [associations]
symbol:l(3)72Ab "lethal (3) 72Ab" species:7227 "Drosophila
melanogaster" [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005682 "U5 snRNP" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0007067 GO:GO:0003676 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR
GO:GO:0004004 GO:GO:0000381 EMBL:BT016121 EMBL:AY069270
RefSeq:NP_648818.3 UniGene:Dm.973 ProteinModelPortal:Q9VUV9
SMR:Q9VUV9 IntAct:Q9VUV9 STRING:Q9VUV9 PaxDb:Q9VUV9 PRIDE:Q9VUV9
EnsemblMetazoa:FBtr0075527 GeneID:39737 KEGG:dme:Dmel_CG5931
FlyBase:FBgn0036548 InParanoid:Q9VUV9 OrthoDB:EOG4S4MWW
PhylomeDB:Q9VUV9 GenomeRNAi:39737 NextBio:815125 Bgee:Q9VUV9
GermOnline:CG5931 Uniprot:Q9VUV9
Length = 2142
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 35/91 (38%), Positives = 50/91 (54%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y+ + R +L+ + +QM GRAGR D G
Sbjct: 807 QVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGE 866
Query: 73 -VIIMCKEELPGQEALKKMMLGKQTKLVSQF 102
++I EL Q L +L +Q + SQF
Sbjct: 867 GILITNHSEL--QFYLS--LLNQQLPIESQF 893
>POMBASE|SPBC13G1.10c [details] [associations]
symbol:mug81 "ATP-dependent RNA helicase Slh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:2000765 "regulation of
cytoplasmic translation" evidence=ISS] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 PomBase:SPBC13G1.10c
GO:GO:0005829 GO:GO:0005524 GO:GO:0007126 GO:GO:2000765
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GO:GO:0004004 PIR:T39411
RefSeq:NP_596560.1 ProteinModelPortal:O60072 PRIDE:O60072
EnsemblFungi:SPBC13G1.10c.1 GeneID:2539673 KEGG:spo:SPBC13G1.10c
OMA:RKPTGEG OrthoDB:EOG4H75KM NextBio:20800827 Uniprot:O60072
Length = 1935
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 32/75 (42%), Positives = 39/75 (52%)
Query: 8 ELDVFQK-QILFATETFAMGVNMPARTVAFDSTRKYDGS--ERRDLNPAEYIQMAGRAGR 64
EL V K QIL AT T A GVN PA V T YD +D++ + +QM GRAGR
Sbjct: 1440 ELFVNNKVQILIATSTLAWGVNTPAHLVIVKGTEYYDAKIGGYKDMDLTDVLQMLGRAGR 1499
Query: 65 RGLDESGTVIIMCKE 79
D SG I ++
Sbjct: 1500 PQFDNSGVARIFVQD 1514
>SGD|S000003220 [details] [associations]
symbol:HFM1 "Meiosis specific DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007129 "synapsis" evidence=IGI;IMP]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0007126
"meiosis" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SGD:S000003220 GO:GO:0005524
GO:GO:0005634 EMBL:BK006941 GO:GO:0046872 GO:GO:0003677 EMBL:X94357
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0007131 GO:GO:0008026 GO:GO:0007129
GO:GO:0006268 KO:K15271 EMBL:Z72773 EMBL:U22156 RefSeq:NP_011263.2
ProteinModelPortal:P51979 SMR:P51979 DIP:DIP-2604N IntAct:P51979
MINT:MINT-426642 STRING:P51979 PaxDb:P51979 PeptideAtlas:P51979
EnsemblFungi:YGL251C GeneID:852641 KEGG:sce:YGL251C CYGD:YGL251c
GeneTree:ENSGT00550000074822 HOGENOM:HOG000093662 OMA:GNYECNH
OrthoDB:EOG4WWVSR NextBio:971894 Genevestigator:P51979
GermOnline:YGL251C Uniprot:P51979
Length = 1187
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 16 ILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVII 75
IL +T T A+GVN+PA V T+ ++ SE ++ + + +QM GRAGR + G +I
Sbjct: 447 ILCSTSTLAVGVNLPAYLVIIKGTKSWNSSEIQEYSDLDVLQMIGRAGRPQFETHGCAVI 506
Query: 76 MCKEEL 81
M ++
Sbjct: 507 MTDSKM 512
>UNIPROTKB|O75417 [details] [associations]
symbol:POLQ "DNA polymerase theta" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271
Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194
SMART:SM00482 SMART:SM00490 GO:GO:0005524 GO:GO:0005654
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098
EMBL:AC069239 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 GO:GO:0008026 GO:GO:0003887 GO:GO:0043142
EMBL:AF052573 EMBL:AY338826 EMBL:AC079841 EMBL:AF043628
IPI:IPI00794779 IPI:IPI01012356 RefSeq:NP_955452.3
UniGene:Hs.241517 ProteinModelPortal:O75417 STRING:O75417
PhosphoSite:O75417 PaxDb:O75417 PRIDE:O75417 DNASU:10721
Ensembl:ENST00000264233 GeneID:10721 KEGG:hsa:10721 UCSC:uc003eed.3
UCSC:uc003eee.4 CTD:10721 GeneCards:GC03M121150 H-InvDB:HIX0030706
HGNC:HGNC:9186 HPA:HPA048931 MIM:604419 neXtProt:NX_O75417
PharmGKB:PA33506 HOGENOM:HOG000146444 HOVERGEN:HBG005525 KO:K02349
OrthoDB:EOG42RD6C ChEMBL:CHEMBL6025 GenomeRNAi:10721 NextBio:40701
ArrayExpress:O75417 Bgee:O75417 CleanEx:HS_POLH CleanEx:HS_POLQ
Genevestigator:O75417 GermOnline:ENSG00000051341 Uniprot:O75417
Length = 2590
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++L AT T + GVN+PAR V T + G R L+ Y QM GRAGR+G+D G I
Sbjct: 438 RVLAATSTLSSGVNLPARRVII-RTPIFGG---RPLDILTYKQMVGRAGRKGVDTVGESI 493
Query: 75 IMCK 78
++CK
Sbjct: 494 LICK 497
>ZFIN|ZDB-GENE-081105-64 [details] [associations]
symbol:si:ch211-251j10.5 "si:ch211-251j10.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 ZFIN:ZDB-GENE-081105-64 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
HOVERGEN:HBG051896 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 GO:GO:0008026 EMBL:BX640472
EMBL:CR376723 IPI:IPI00608684 RefSeq:NP_001116729.1
UniGene:Dr.32574 SMR:B0S754 Ensembl:ENSDART00000109885
GeneID:799690 KEGG:dre:799690 NextBio:20933935 Uniprot:B0S754
Length = 2134
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 34/99 (34%), Positives = 49/99 (49%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L +T T A GVN+PA TV T+ Y + R +L + +QM GRAGR D G
Sbjct: 804 QVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDSKGE 863
Query: 73 VIIMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILN 111
I++ G+ +L +Q + SQ A +LN
Sbjct: 864 GILITSH---GELQYYLSLLNQQLPIESQMVGKLADMLN 899
>DICTYBASE|DDB_G0278827 [details] [associations]
symbol:DDB_G0278827 "Probable ATP-dependent RNA
helicase DDX60" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0278827 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AAFI02000024 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 RefSeq:XP_641993.1
ProteinModelPortal:Q54XN7 EnsemblProtists:DDB0206223 GeneID:8621725
KEGG:ddi:DDB_G0278827 InParanoid:Q54XN7 OMA:RESALIC Uniprot:Q54XN7
Length = 1816
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 36/139 (25%), Positives = 70/139 (50%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
Q++FAT T A+GVN PA++ F Y LN Q AGRAGRRG D G VI
Sbjct: 1294 QVVFATSTLAVGVNAPAKSSVFLGDSPY-------LNVLTSKQCAGRAGRRGFDNYGNVI 1346
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNLXXXXXXXXXXXXXXXFKEFGSR 134
+ LP Q+ + +++ + + ++ ++ ++ L+L +E ++
Sbjct: 1347 FV---GLPKQK-INRLLNSRLSNIIGNSVVSPSLCLSLVSRYDYSTNGSANKSNEE--NK 1400
Query: 135 FRMQKNKEDLAQLEAKVRQ 153
++++N+++ + + K ++
Sbjct: 1401 VQVKENEKEREKEKEKEKE 1419
>GENEDB_PFALCIPARUM|PFF1140c [details] [associations]
symbol:PFF1140c "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0016070 GO:GO:0004004 EMBL:AL844505 RefSeq:XP_966219.1
ProteinModelPortal:C6KT73 PRIDE:C6KT73
EnsemblProtists:PFF1140c:mRNA GeneID:3885873 KEGG:pfa:PFF1140c
EuPathDB:PlasmoDB:PF3D7_0623700 HOGENOM:HOG000281593 Uniprot:C6KT73
Length = 1137
Score = 117 (46.2 bits), Expect = 0.00048, P = 0.00048
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 13 QKQILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGR 64
++ IL AT+ MG+N+ + + F S +KYDG R L +E++Q+AGRAGR
Sbjct: 639 KETILIATDVIGMGLNINIKRIIFYSLKKYDGDILRYLTMSEFLQIAGRAGR 690
>UNIPROTKB|C6KT73 [details] [associations]
symbol:PFF1140c "ATP dependent DEAD-box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0016070
GO:GO:0004004 EMBL:AL844505 RefSeq:XP_966219.1
ProteinModelPortal:C6KT73 PRIDE:C6KT73
EnsemblProtists:PFF1140c:mRNA GeneID:3885873 KEGG:pfa:PFF1140c
EuPathDB:PlasmoDB:PF3D7_0623700 HOGENOM:HOG000281593 Uniprot:C6KT73
Length = 1137
Score = 117 (46.2 bits), Expect = 0.00048, P = 0.00048
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 13 QKQILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGR 64
++ IL AT+ MG+N+ + + F S +KYDG R L +E++Q+AGRAGR
Sbjct: 639 KETILIATDVIGMGLNINIKRIIFYSLKKYDGDILRYLTMSEFLQIAGRAGR 690
>ASPGD|ASPL0000044033 [details] [associations]
symbol:AN2482 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:BN001307 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 OMA:FPGKHYC InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GO:GO:0008026 OrthoDB:EOG4H75KM
EMBL:AACD01000041 RefSeq:XP_660086.1 ProteinModelPortal:Q5BAE8
EnsemblFungi:CADANIAT00009203 GeneID:2875191 KEGG:ani:AN2482.2
Uniprot:Q5BAE8
Length = 2015
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSER--RDLNPAEYIQMAGRAGRRGLDESGT 72
QIL AT T A GVN+PA V T+ +D +D++ + +QM GRAGR D SG
Sbjct: 1447 QILVATSTLAWGVNLPAHLVVVKGTQFFDAKTEGYKDMDLTDVLQMLGRAGRPQFDSSGI 1506
Query: 73 VIIMCKE 79
I ++
Sbjct: 1507 ARIFTQD 1513
>ZFIN|ZDB-GENE-040724-232 [details] [associations]
symbol:si:rp71-1p14.5 "si:rp71-1p14.5" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 ZFIN:ZDB-GENE-040724-232 GO:GO:0005524 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0003887 EMBL:CU928848
EMBL:CU695000 IPI:IPI00492363 Ensembl:ENSDART00000065556
Uniprot:F1Q4P4
Length = 2576
Score = 120 (47.3 bits), Expect = 0.00052, P = 0.00052
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
++L AT T + GVN+PAR V T ++G L+ Y QM GRAGR+G+D G +
Sbjct: 641 RVLAATSTLSSGVNLPARRVII-RTPVFNGHL---LDILTYKQMVGRAGRKGVDTIGESV 696
Query: 75 IMCKE 79
++CKE
Sbjct: 697 LVCKE 701
>UNIPROTKB|Q8IY21 [details] [associations]
symbol:DDX60 "Probable ATP-dependent RNA helicase DDX60"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0009615 "response to
virus" evidence=IDA] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:1900245 "positive regulation of MDA-5 signaling
pathway" evidence=IMP] [GO:1900246 "positive regulation of RIG-I
signaling pathway" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003727 GO:GO:0045087 GO:GO:0051607 GO:GO:0009615
GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC068989 EMBL:BC007820
EMBL:BC038115 EMBL:AK001649 IPI:IPI00217606 RefSeq:NP_060101.3
UniGene:Hs.591710 ProteinModelPortal:Q8IY21 SMR:Q8IY21
IntAct:Q8IY21 STRING:Q8IY21 PhosphoSite:Q8IY21 DMDM:296439377
PaxDb:Q8IY21 PRIDE:Q8IY21 Ensembl:ENST00000393743 GeneID:55601
KEGG:hsa:55601 UCSC:uc003irp.3 CTD:55601 GeneCards:GC04M169137
HGNC:HGNC:25942 HPA:HPA046952 MIM:613974 neXtProt:NX_Q8IY21
PharmGKB:PA162383444 eggNOG:COG4581 HOGENOM:HOG000169263
HOVERGEN:HBG107797 InParanoid:Q8IY21 OMA:QDCTYAD OrthoDB:EOG4XSKP0
PhylomeDB:Q8IY21 GenomeRNAi:55601 NextBio:60142 ArrayExpress:Q8IY21
Bgee:Q8IY21 CleanEx:HS_DDX60 Genevestigator:Q8IY21 GO:GO:1900245
GO:GO:1900246 Uniprot:Q8IY21
Length = 1712
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
+++ AT T A+GVNMP ++V F Y L+ Y QM+GRAGRRG D G V
Sbjct: 1286 RVVTATGTLALGVNMPCKSVVFAQNSVY-------LDALNYRQMSGRAGRRGQDLMGDVY 1338
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
++P + + K++ +L F L+ ++L L
Sbjct: 1339 FF---DIPFPK-IGKLIKSNVPELRGHFPLSITLVLRL 1372
>POMBASE|SPAC694.02 [details] [associations]
symbol:SPAC694.02 "DEAD/DEAH box helicase" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC694.02
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:T50247 RefSeq:NP_594482.1
ProteinModelPortal:Q9P7T8 PRIDE:Q9P7T8 EnsemblFungi:SPAC694.02.1
GeneID:2543333 KEGG:spo:SPAC694.02 HOGENOM:HOG000194492 OMA:HTRDYRI
OrthoDB:EOG4S4SQ7 NextBio:20804349 Uniprot:Q9P7T8
Length = 1717
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 34/100 (34%), Positives = 52/100 (52%)
Query: 13 QKQILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGT 72
Q ++ AT T ++G+NMP RTV F + LN + Q AGRAGRRG D G
Sbjct: 1248 QLTVVIATRTLSLGINMPCRTVVFLG-------DSLQLNALNFHQAAGRAGRRGFDLLGH 1300
Query: 73 VIIMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
V + +P + + +++ K + QF LT +++L L
Sbjct: 1301 VGFL---GVPLHK-IYRLLTTKLWDIQGQFPLTTSLVLQL 1336
>UNIPROTKB|J9P0M0 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102154 EMBL:AAEX03010133 EMBL:AAEX03010134
EMBL:AAEX03010135 Ensembl:ENSCAFT00000044956 Uniprot:J9P0M0
Length = 1708
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
+++ AT T A+G+NMP ++V F Y L+ Y QM+GRAGRRG D G V
Sbjct: 1282 RVVTATGTLALGINMPCKSVVFAQNSIY-------LDALNYRQMSGRAGRRGQDLMGDVY 1334
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
LP ++K++ +L QF L ++L L
Sbjct: 1335 FF-GIPLP---KIEKLIKSNVPELRGQFPLGITLVLRL 1368
>UNIPROTKB|E2QSY2 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:1900246 "positive regulation of RIG-I
signaling pathway" evidence=IEA] [GO:1900245 "positive regulation
of MDA-5 signaling pathway" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003727
GO:GO:0051607 GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 OMA:QDCTYAD
GO:GO:1900245 GO:GO:1900246 GeneTree:ENSGT00690000102154
EMBL:AAEX03010133 EMBL:AAEX03010134 EMBL:AAEX03010135
Ensembl:ENSCAFT00000014321 Uniprot:E2QSY2
Length = 1711
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERRDLNPAEYIQMAGRAGRRGLDESGTVI 74
+++ AT T A+G+NMP ++V F Y L+ Y QM+GRAGRRG D G V
Sbjct: 1285 RVVTATGTLALGINMPCKSVVFAQNSIY-------LDALNYRQMSGRAGRRGQDLMGDVY 1337
Query: 75 IMCKEELPGQEALKKMMLGKQTKLVSQFRLTYAMILNL 112
LP ++K++ +L QF L ++L L
Sbjct: 1338 FF-GIPLP---KIEKLIKSNVPELRGQFPLGITLVLRL 1371
>WB|WBGene00013189 [details] [associations]
symbol:Y54E2A.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AL032646 RefSeq:NP_497060.2
ProteinModelPortal:Q9XWI1 SMR:Q9XWI1 PaxDb:Q9XWI1
EnsemblMetazoa:Y54E2A.4 GeneID:190256 KEGG:cel:CELE_Y54E2A.4
UCSC:Y54E2A.4 CTD:190256 WormBase:Y54E2A.4 Uniprot:Q9XWI1
Length = 2017
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 15 QILFATETFAMGVNMPARTVAFDSTRKYDGSERR--DLNPAEYIQMAGRAGRRGLDESGT 72
Q+L AT T A G+N PA V T +DG + + D + +QM GRAGR D+S
Sbjct: 1497 QVLIATATLAWGINCPAHLVIVKGTEYFDGKKGKYVDFPVTDVLQMMGRAGRPQFDDSAV 1556
Query: 73 VIIMCKE 79
+I ++
Sbjct: 1557 AVIYVQD 1563
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 229 214 0.00085 112 3 11 22 0.45 32
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 106
No. of states in DFA: 595 (63 KB)
Total size of DFA: 156 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.30u 0.08s 18.38t Elapsed: 00:00:01
Total cpu time: 18.31u 0.08s 18.39t Elapsed: 00:00:01
Start: Thu Aug 15 17:24:43 2013 End: Thu Aug 15 17:24:44 2013
WARNINGS ISSUED: 1