Query psy2762
Match_columns 318
No_of_seqs 152 out of 1933
Neff 9.7
Searched_HMMs 29240
Date Sat Aug 17 00:32:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2762.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2762hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bg1_A Protein SEC13 homolog; 100.0 7E-50 2.4E-54 354.6 33.5 301 1-311 1-305 (316)
2 2pm7_B Protein transport prote 100.0 3.9E-48 1.3E-52 340.3 35.1 288 8-310 4-296 (297)
3 2ynn_A Coatomer subunit beta'; 100.0 3.9E-44 1.3E-48 315.8 36.6 260 3-302 3-262 (304)
4 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.6E-43 1.6E-47 314.4 37.2 261 8-302 10-338 (345)
5 1vyh_C Platelet-activating fac 100.0 1.4E-42 4.9E-47 318.5 34.4 257 8-305 103-375 (410)
6 3ow8_A WD repeat-containing pr 100.0 4.1E-42 1.4E-46 305.5 35.3 251 7-300 26-280 (321)
7 4gqb_B Methylosome protein 50; 100.0 3.5E-42 1.2E-46 308.9 34.5 251 11-301 80-333 (344)
8 3ow8_A WD repeat-containing pr 100.0 7.5E-42 2.6E-46 303.8 35.2 245 8-297 75-319 (321)
9 1vyh_C Platelet-activating fac 100.0 7.2E-42 2.5E-46 313.8 33.8 263 7-297 144-409 (410)
10 3frx_A Guanine nucleotide-bind 100.0 2E-41 6.8E-46 300.6 35.4 261 6-299 10-317 (319)
11 2pbi_B Guanine nucleotide-bind 100.0 2.9E-41 9.9E-46 304.0 36.9 260 7-296 58-354 (354)
12 3jrp_A Fusion protein of prote 100.0 1.7E-41 6E-46 305.1 34.4 290 7-311 5-299 (379)
13 1got_B GT-beta; complex (GTP-b 100.0 6E-41 2.1E-45 300.0 36.3 253 7-303 49-305 (340)
14 2hes_X YDR267CP; beta-propelle 100.0 1.5E-40 5.2E-45 296.3 36.8 263 8-306 9-286 (330)
15 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-40 5E-45 294.5 36.5 286 5-311 3-349 (351)
16 1got_B GT-beta; complex (GTP-b 100.0 1.6E-40 5.6E-45 297.2 36.2 248 9-296 93-340 (340)
17 2hes_X YDR267CP; beta-propelle 100.0 3E-40 1E-44 294.3 34.0 260 11-299 56-328 (330)
18 4g56_B MGC81050 protein; prote 100.0 5.1E-41 1.7E-45 302.7 28.8 258 9-304 90-348 (357)
19 3iz6_a 40S ribosomal protein R 100.0 2.3E-40 7.9E-45 300.7 32.9 266 7-299 60-375 (380)
20 4aow_A Guanine nucleotide-bind 100.0 1.8E-39 6.2E-44 288.2 36.2 260 6-301 31-339 (340)
21 4gqb_B Methylosome protein 50; 100.0 8.4E-41 2.9E-45 299.9 27.4 260 10-300 27-290 (344)
22 1nr0_A Actin interacting prote 100.0 7.7E-40 2.6E-44 315.0 34.5 271 8-301 185-569 (611)
23 2xzm_R RACK1; ribosome, transl 100.0 3.6E-39 1.2E-43 288.7 35.7 266 8-301 16-287 (343)
24 4g56_B MGC81050 protein; prote 100.0 1E-40 3.5E-45 300.7 25.6 255 10-300 39-302 (357)
25 1nr0_A Actin interacting prote 100.0 1.3E-39 4.3E-44 313.5 33.2 252 7-300 53-356 (611)
26 4ery_A WD repeat-containing pr 100.0 3.1E-38 1.1E-42 278.3 37.8 252 5-298 15-311 (312)
27 2xzm_R RACK1; ribosome, transl 100.0 3.1E-39 1.1E-43 289.1 31.6 251 8-299 71-340 (343)
28 1erj_A Transcriptional repress 100.0 2.7E-38 9.2E-43 288.4 36.3 244 13-299 123-389 (393)
29 2ynn_A Coatomer subunit beta'; 100.0 1.8E-38 6.1E-43 279.6 33.7 251 8-299 50-302 (304)
30 1erj_A Transcriptional repress 100.0 5.7E-38 1.9E-42 286.2 34.9 252 11-304 62-346 (393)
31 2ymu_A WD-40 repeat protein; u 100.0 3.9E-38 1.3E-42 299.7 34.1 239 8-296 339-577 (577)
32 3jro_A Fusion protein of prote 100.0 1.2E-38 4E-43 313.7 28.4 288 8-310 4-296 (753)
33 1k8k_C P40, ARP2/3 complex 41 100.0 3.2E-37 1.1E-41 277.0 33.7 262 10-310 5-286 (372)
34 3dwl_C Actin-related protein 2 100.0 6.5E-39 2.2E-43 289.4 21.5 263 10-309 8-290 (377)
35 4e54_B DNA damage-binding prot 100.0 1.3E-38 4.3E-43 294.2 23.7 256 9-301 115-432 (435)
36 3dm0_A Maltose-binding peripla 100.0 6.9E-37 2.4E-41 298.4 33.9 257 8-302 377-635 (694)
37 2ymu_A WD-40 repeat protein; u 100.0 6.2E-36 2.1E-40 284.5 37.4 240 8-297 298-537 (577)
38 3zwl_B Eukaryotic translation 100.0 1.8E-35 6.3E-40 264.5 38.1 252 8-300 27-347 (369)
39 4gga_A P55CDC, cell division c 100.0 1.2E-35 4E-40 273.0 36.8 249 9-300 143-396 (420)
40 3dm0_A Maltose-binding peripla 100.0 5E-36 1.7E-40 292.4 34.6 248 8-298 425-692 (694)
41 3k26_A Polycomb protein EED; W 100.0 1.7E-36 5.8E-41 271.2 28.5 253 11-298 67-365 (366)
42 1gxr_A ESG1, transducin-like e 100.0 2.6E-35 9E-40 260.5 35.8 251 10-303 48-300 (337)
43 4aez_A CDC20, WD repeat-contai 100.0 2E-35 7E-40 269.7 36.2 254 8-305 129-386 (401)
44 3ei3_B DNA damage-binding prot 100.0 1.9E-35 6.6E-40 267.6 33.1 256 7-306 67-346 (383)
45 2j04_B YDR362CP, TAU91; beta p 100.0 5.7E-37 2E-41 289.1 23.7 260 9-300 203-518 (524)
46 4h5i_A Guanine nucleotide-exch 100.0 6.6E-36 2.2E-40 270.2 29.4 203 66-299 133-343 (365)
47 1gxr_A ESG1, transducin-like e 100.0 1E-34 3.4E-39 256.8 36.4 241 11-297 95-335 (337)
48 4a11_B DNA excision repair pro 100.0 5.5E-35 1.9E-39 265.1 33.1 266 6-302 36-368 (408)
49 3vl1_A 26S proteasome regulato 100.0 4.4E-35 1.5E-39 267.9 32.7 265 10-302 95-368 (420)
50 2j04_B YDR362CP, TAU91; beta p 100.0 1.6E-36 5.6E-41 286.0 23.7 251 12-299 132-428 (524)
51 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-35 9.9E-40 263.7 30.7 218 56-299 5-225 (345)
52 1sq9_A Antiviral protein SKI8; 100.0 4.1E-35 1.4E-39 266.0 31.7 262 6-304 9-327 (397)
53 3dw8_B Serine/threonine-protei 100.0 1.6E-35 5.3E-40 272.8 28.8 266 11-302 26-376 (447)
54 4ggc_A P55CDC, cell division c 100.0 3.6E-34 1.2E-38 251.6 36.1 250 9-299 63-315 (318)
55 3mkq_A Coatomer beta'-subunit; 100.0 6.6E-35 2.3E-39 288.2 34.5 257 4-301 4-261 (814)
56 2xyi_A Probable histone-bindin 100.0 1.7E-35 5.8E-40 272.9 27.5 268 8-299 123-410 (430)
57 3i2n_A WD repeat-containing pr 100.0 2.7E-35 9.4E-40 262.7 27.8 256 9-300 61-354 (357)
58 3gre_A Serine/threonine-protei 100.0 3.2E-35 1.1E-39 270.7 28.8 268 8-307 58-367 (437)
59 2pm9_A Protein WEB1, protein t 100.0 7.7E-36 2.6E-40 272.2 23.8 258 10-301 64-339 (416)
60 1yfq_A Cell cycle arrest prote 100.0 1.1E-34 3.8E-39 257.7 30.7 251 8-301 6-284 (342)
61 1sq9_A Antiviral protein SKI8; 100.0 4E-35 1.4E-39 266.0 27.4 256 8-300 57-396 (397)
62 3sfz_A APAF-1, apoptotic pepti 100.0 3.4E-34 1.2E-38 295.5 36.8 250 8-298 610-912 (1249)
63 3v7d_B Cell division control p 100.0 1E-33 3.5E-38 262.6 36.4 248 8-302 116-384 (464)
64 1r5m_A SIR4-interacting protei 100.0 3.4E-34 1.2E-38 261.1 32.5 245 11-298 106-424 (425)
65 3frx_A Guanine nucleotide-bind 100.0 3.5E-34 1.2E-38 253.9 30.8 218 56-301 7-229 (319)
66 2pm7_B Protein transport prote 100.0 1E-34 3.6E-39 254.7 26.9 223 60-300 3-239 (297)
67 1k8k_C P40, ARP2/3 complex 41 100.0 5.1E-34 1.8E-38 256.1 31.7 255 8-299 47-361 (372)
68 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-33 5.1E-38 246.9 33.7 247 6-303 11-259 (313)
69 3k26_A Polycomb protein EED; W 100.0 7.2E-35 2.5E-39 260.6 25.4 255 7-301 12-320 (366)
70 3ei3_B DNA damage-binding prot 100.0 2E-34 7E-39 260.8 28.0 245 10-299 115-382 (383)
71 3mmy_A MRNA export factor; mRN 100.0 2E-34 6.7E-39 257.7 27.3 265 8-298 34-345 (368)
72 3v7d_B Cell division control p 100.0 2.3E-33 7.9E-38 260.2 34.6 246 8-301 157-423 (464)
73 3vl1_A 26S proteasome regulato 100.0 3.3E-34 1.1E-38 262.1 28.2 251 8-299 134-419 (420)
74 3dwl_C Actin-related protein 2 100.0 6E-35 2.1E-39 263.4 23.0 255 8-297 50-377 (377)
75 3i2n_A WD repeat-containing pr 100.0 8.3E-34 2.9E-38 253.1 29.5 258 7-301 12-293 (357)
76 3odt_A Protein DOA1; ubiquitin 100.0 2.4E-33 8.3E-38 245.6 31.8 243 8-300 54-297 (313)
77 4gq1_A NUP37; propeller, trans 100.0 5.9E-35 2E-39 266.4 21.9 258 11-298 87-388 (393)
78 2pm9_A Protein WEB1, protein t 100.0 2.6E-34 8.9E-39 262.0 25.2 260 11-304 10-299 (416)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 5.1E-34 1.7E-38 260.3 26.5 260 8-306 76-348 (402)
80 3bg1_A Protein SEC13 homolog; 100.0 3.2E-34 1.1E-38 253.8 23.5 222 60-299 7-247 (316)
81 3gre_A Serine/threonine-protei 100.0 9.1E-34 3.1E-38 261.0 27.0 255 11-296 109-437 (437)
82 1r5m_A SIR4-interacting protei 100.0 4.7E-33 1.6E-37 253.5 31.2 250 10-301 42-321 (425)
83 3iz6_a 40S ribosomal protein R 100.0 1.5E-33 5.2E-38 255.8 26.8 223 56-304 56-285 (380)
84 2pbi_B Guanine nucleotide-bind 100.0 3.3E-33 1.1E-37 251.3 28.5 204 8-252 149-354 (354)
85 4aez_A CDC20, WD repeat-contai 100.0 3.9E-32 1.3E-36 248.0 34.8 245 10-300 88-337 (401)
86 1p22_A F-BOX/WD-repeat protein 100.0 4.7E-32 1.6E-36 250.0 35.0 237 10-300 130-366 (435)
87 1pgu_A Actin interacting prote 100.0 1.4E-32 4.7E-37 262.6 32.5 255 8-301 13-285 (615)
88 2aq5_A Coronin-1A; WD40 repeat 100.0 7.4E-33 2.5E-37 252.6 28.2 261 15-310 36-311 (402)
89 3sfz_A APAF-1, apoptotic pepti 100.0 9.9E-33 3.4E-37 284.6 32.1 272 8-300 652-1035(1249)
90 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6E-32 2E-36 250.5 33.1 271 13-310 4-352 (450)
91 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-32 4.8E-37 253.5 28.7 242 8-302 168-417 (435)
92 4ery_A WD repeat-containing pr 100.0 9.5E-32 3.3E-36 236.7 32.3 212 56-300 13-224 (312)
93 2oaj_A Protein SNI1; WD40 repe 100.0 2.8E-32 9.6E-37 272.7 30.7 164 110-297 433-659 (902)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.7E-31 9.1E-36 245.5 34.6 241 8-304 113-353 (445)
95 4e54_B DNA damage-binding prot 100.0 6.7E-33 2.3E-37 255.9 23.3 214 59-301 112-329 (435)
96 4aow_A Guanine nucleotide-bind 100.0 2.1E-31 7.1E-36 236.2 31.6 219 55-301 27-248 (340)
97 1pgu_A Actin interacting prote 100.0 1.4E-31 4.9E-36 255.6 32.6 252 8-299 198-614 (615)
98 3dw8_B Serine/threonine-protei 100.0 4E-32 1.4E-36 250.1 27.0 255 14-297 94-444 (447)
99 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.4E-30 4.8E-35 240.6 36.7 242 8-306 154-398 (445)
100 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-31 4.4E-36 268.0 32.0 246 9-297 13-310 (902)
101 4h5i_A Guanine nucleotide-exch 100.0 9E-32 3.1E-36 243.0 28.0 206 11-255 131-343 (365)
102 3jrp_A Fusion protein of prote 100.0 2.1E-31 7.1E-36 239.2 27.9 227 57-301 2-242 (379)
103 3mkq_A Coatomer beta'-subunit; 100.0 5.3E-31 1.8E-35 260.3 33.3 251 8-299 50-302 (814)
104 3vu4_A KMHSV2; beta-propeller 100.0 4.9E-31 1.7E-35 237.2 30.2 250 10-301 16-338 (355)
105 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-31 3.7E-36 240.0 24.9 243 16-305 39-299 (343)
106 2j04_A TAU60, YPL007P, hypothe 100.0 8.3E-32 2.8E-36 250.8 23.3 249 10-298 12-296 (588)
107 4gga_A P55CDC, cell division c 100.0 1.1E-29 3.8E-34 233.1 35.5 243 15-303 107-357 (420)
108 2w18_A PALB2, fancn, partner a 100.0 1.2E-30 4E-35 229.4 25.8 214 12-297 110-355 (356)
109 1yfq_A Cell cycle arrest prote 100.0 5E-31 1.7E-35 234.1 23.6 239 10-296 53-321 (342)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7E-30 2.4E-34 236.5 31.2 258 10-304 99-397 (450)
111 4ggc_A P55CDC, cell division c 100.0 4.5E-29 1.5E-33 219.0 34.5 245 16-304 28-278 (318)
112 2j04_A TAU60, YPL007P, hypothe 100.0 4.9E-30 1.7E-34 238.9 28.3 233 9-288 81-350 (588)
113 4a11_B DNA excision repair pro 100.0 5.8E-29 2E-33 225.4 28.3 262 10-297 96-403 (408)
114 3f3f_A Nucleoporin SEH1; struc 100.0 8E-29 2.7E-33 218.9 26.8 230 8-257 52-339 (351)
115 3jro_A Fusion protein of prote 100.0 5.6E-29 1.9E-33 244.8 26.3 224 59-300 2-239 (753)
116 4gq1_A NUP37; propeller, trans 100.0 1.6E-28 5.5E-33 223.7 26.5 268 11-304 16-353 (393)
117 3mmy_A MRNA export factor; mRN 100.0 2.1E-28 7.2E-33 218.5 26.8 221 56-300 29-305 (368)
118 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-28 4.8E-33 219.8 25.5 246 13-297 76-331 (343)
119 3zwl_B Eukaryotic translation 100.0 1.3E-27 4.6E-32 213.3 31.7 217 57-305 23-255 (369)
120 2xyi_A Probable histone-bindin 100.0 1.1E-28 3.9E-33 227.2 25.3 264 15-300 47-354 (430)
121 3bws_A Protein LP49; two-domai 100.0 2E-26 7E-31 211.3 34.1 241 10-298 166-431 (433)
122 1l0q_A Surface layer protein; 100.0 1.5E-25 5.1E-30 202.8 35.9 241 10-300 29-276 (391)
123 3bws_A Protein LP49; two-domai 100.0 2.1E-26 7.3E-31 211.2 29.4 241 14-300 123-391 (433)
124 3vu4_A KMHSV2; beta-propeller 100.0 2.6E-26 9.1E-31 206.3 25.1 226 57-300 10-272 (355)
125 1l0q_A Surface layer protein; 99.9 2.6E-24 8.8E-29 194.6 32.4 227 26-301 3-235 (391)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.8E-24 6.1E-29 198.5 25.2 239 9-298 113-386 (415)
127 1ri6_A Putative isomerase YBHE 99.9 7.3E-23 2.5E-27 181.1 33.3 270 11-315 35-325 (343)
128 1nir_A Nitrite reductase; hemo 99.9 3.4E-22 1.2E-26 189.3 32.6 260 7-302 174-461 (543)
129 3hfq_A Uncharacterized protein 99.9 1.6E-21 5.5E-26 173.8 34.1 263 11-308 37-327 (347)
130 2ojh_A Uncharacterized protein 99.9 5.4E-23 1.8E-27 177.5 22.2 237 10-290 38-293 (297)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.1E-22 1.1E-26 183.5 27.9 222 9-281 174-410 (415)
132 2w18_A PALB2, fancn, partner a 99.9 6.1E-23 2.1E-27 180.5 19.3 158 11-205 176-355 (356)
133 1ri6_A Putative isomerase YBHE 99.9 2.8E-20 9.7E-25 164.3 34.0 248 26-309 6-273 (343)
134 2ecf_A Dipeptidyl peptidase IV 99.9 5.7E-22 1.9E-26 194.1 24.6 242 13-302 36-370 (741)
135 2oit_A Nucleoporin 214KDA; NH2 99.9 3.1E-21 1.1E-25 177.9 27.9 266 12-307 35-342 (434)
136 1nir_A Nitrite reductase; hemo 99.9 1E-20 3.4E-25 179.3 29.0 246 20-311 144-418 (543)
137 2ojh_A Uncharacterized protein 99.9 1.6E-20 5.4E-25 161.9 26.6 230 30-307 17-265 (297)
138 3u4y_A Uncharacterized protein 99.9 5.5E-20 1.9E-24 162.4 28.8 249 11-299 38-304 (331)
139 3o4h_A Acylamino-acid-releasin 99.9 2.1E-21 7.3E-26 185.2 20.8 232 13-297 21-274 (582)
140 3scy_A Hypothetical bacterial 99.9 4E-19 1.4E-23 159.2 33.1 257 12-305 48-344 (361)
141 1xfd_A DIP, dipeptidyl aminope 99.9 2.5E-21 8.4E-26 189.0 20.2 239 14-298 17-341 (723)
142 1pby_B Quinohemoprotein amine 99.9 1E-19 3.4E-24 160.4 27.1 253 15-304 35-315 (337)
143 1jmx_B Amine dehydrogenase; ox 99.9 1.4E-19 4.9E-24 160.3 27.5 238 18-300 4-326 (349)
144 2z3z_A Dipeptidyl aminopeptida 99.9 9.1E-20 3.1E-24 177.6 27.5 250 10-300 117-436 (706)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 1.9E-20 6.4E-25 172.7 18.7 203 67-300 37-279 (434)
146 2ecf_A Dipeptidyl peptidase IV 99.9 8.5E-20 2.9E-24 178.7 24.0 241 14-301 109-415 (741)
147 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-19 4E-24 177.1 24.9 253 8-301 52-395 (723)
148 3vgz_A Uncharacterized protein 99.9 3.3E-18 1.1E-22 151.9 31.8 245 13-300 40-304 (353)
149 3hfq_A Uncharacterized protein 99.8 2.6E-18 8.7E-23 153.0 30.3 244 32-310 13-282 (347)
150 1k32_A Tricorn protease; prote 99.8 1.9E-19 6.5E-24 183.0 24.7 236 10-298 242-501 (1045)
151 2z3z_A Dipeptidyl aminopeptida 99.8 1.9E-19 6.4E-24 175.3 23.4 241 15-305 27-349 (706)
152 1k32_A Tricorn protease; prote 99.8 1.4E-19 4.9E-24 183.8 23.3 239 10-300 200-462 (1045)
153 3u4y_A Uncharacterized protein 99.8 5.1E-18 1.8E-22 149.7 29.8 247 19-308 3-260 (331)
154 1jof_A Carboxy-CIS,CIS-muconat 99.8 5E-18 1.7E-22 152.7 29.7 250 12-300 38-342 (365)
155 3vgz_A Uncharacterized protein 99.8 2.5E-17 8.6E-22 146.2 29.4 229 14-290 89-335 (353)
156 3scy_A Hypothetical bacterial 99.8 1.7E-16 5.8E-21 142.0 32.8 255 19-311 7-304 (361)
157 3o4h_A Acylamino-acid-releasin 99.8 5.1E-18 1.8E-22 161.8 24.1 240 8-302 59-316 (582)
158 1pby_B Quinohemoprotein amine 99.8 2.2E-17 7.4E-22 145.4 24.9 227 26-300 2-270 (337)
159 1q7f_A NHL, brain tumor CG1071 99.8 5.6E-16 1.9E-20 134.1 32.2 243 10-299 26-280 (286)
160 1z68_A Fibroblast activation p 99.8 1.3E-18 4.4E-23 169.8 16.5 236 17-299 19-344 (719)
161 4a5s_A Dipeptidyl peptidase 4 99.8 7.5E-18 2.6E-22 165.3 19.8 259 11-298 14-352 (740)
162 3pe7_A Oligogalacturonate lyas 99.8 8.2E-17 2.8E-21 145.1 22.9 252 9-306 26-335 (388)
163 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.4E-15 8.1E-20 135.1 31.8 240 28-305 5-297 (365)
164 3fvz_A Peptidyl-glycine alpha- 99.8 1E-15 3.4E-20 135.7 28.2 251 13-299 23-322 (329)
165 3pe7_A Oligogalacturonate lyas 99.8 9.8E-17 3.4E-21 144.5 21.7 249 8-300 75-383 (388)
166 3azo_A Aminopeptidase; POP fam 99.7 3.9E-16 1.3E-20 150.8 21.9 255 9-305 19-330 (662)
167 1z68_A Fibroblast activation p 99.7 8.8E-17 3E-21 156.9 17.3 238 15-299 61-391 (719)
168 2xdw_A Prolyl endopeptidase; a 99.7 2.1E-14 7.3E-19 140.1 28.5 251 9-301 120-416 (710)
169 3e5z_A Putative gluconolactona 99.7 3.8E-14 1.3E-18 123.2 26.8 239 11-299 25-284 (296)
170 3c5m_A Oligogalacturonate lyas 99.7 2.1E-15 7.1E-20 135.9 18.7 236 16-302 83-385 (396)
171 3c5m_A Oligogalacturonate lyas 99.7 3.6E-15 1.2E-19 134.3 17.6 235 15-300 37-330 (396)
172 2gop_A Trilobed protease; beta 99.7 1.8E-13 6.1E-18 121.3 28.1 229 15-307 60-337 (347)
173 3azo_A Aminopeptidase; POP fam 99.7 2.9E-14 9.9E-19 137.7 24.6 257 9-307 63-376 (662)
174 2dg1_A DRP35, lactonase; beta 99.7 3.4E-13 1.2E-17 119.0 29.5 237 11-289 42-300 (333)
175 2bkl_A Prolyl endopeptidase; m 99.6 3E-14 1E-18 138.7 23.3 252 10-307 117-404 (695)
176 1jmx_B Amine dehydrogenase; ox 99.6 2.8E-14 9.7E-19 126.0 19.8 211 15-256 44-326 (349)
177 2oiz_A Aromatic amine dehydrog 99.6 1.5E-13 5.2E-18 123.4 24.5 250 18-308 54-342 (361)
178 4a5s_A Dipeptidyl peptidase 4 99.6 6.3E-14 2.2E-18 137.4 21.3 250 8-301 51-400 (740)
179 1rwi_B Serine/threonine-protei 99.6 2.1E-12 7.3E-17 110.2 25.3 238 15-299 25-264 (270)
180 2dg1_A DRP35, lactonase; beta 99.6 2.5E-12 8.5E-17 113.4 25.2 238 13-297 5-261 (333)
181 1yr2_A Prolyl oligopeptidase; 99.5 1.5E-12 5E-17 127.8 25.6 247 9-300 158-442 (741)
182 2z2n_A Virginiamycin B lyase; 99.5 7.6E-11 2.6E-15 101.6 33.4 250 10-306 11-260 (299)
183 2gop_A Trilobed protease; beta 99.5 6.8E-12 2.3E-16 111.0 27.0 227 12-306 13-297 (347)
184 1q7f_A NHL, brain tumor CG1071 99.5 1.5E-11 5.3E-16 105.9 26.8 201 11-255 74-280 (286)
185 3no2_A Uncharacterized protein 99.5 4.5E-11 1.5E-15 103.2 29.4 231 23-302 3-254 (276)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 7.3E-11 2.5E-15 102.8 30.1 245 14-302 18-302 (314)
187 3dsm_A Uncharacterized protein 99.5 7.3E-11 2.5E-15 104.3 28.7 238 15-298 45-301 (328)
188 2qc5_A Streptogramin B lactona 99.4 2.1E-09 7.1E-14 92.5 33.3 247 11-305 17-264 (300)
189 2z2n_A Virginiamycin B lyase; 99.4 2E-09 6.8E-14 92.6 32.8 241 12-299 55-295 (299)
190 3fvz_A Peptidyl-glycine alpha- 99.4 7.8E-11 2.7E-15 104.1 24.0 211 66-305 23-283 (329)
191 2bkl_A Prolyl endopeptidase; m 99.4 2E-11 6.9E-16 118.8 21.6 239 22-302 76-352 (695)
192 1qks_A Cytochrome CD1 nitrite 99.4 5.5E-10 1.9E-14 105.9 30.1 250 15-300 198-478 (567)
193 2xdw_A Prolyl endopeptidase; a 99.4 1.7E-10 5.9E-15 112.5 26.5 204 64-299 122-366 (710)
194 2oiz_A Aromatic amine dehydrog 99.4 2.9E-10 9.9E-15 101.9 25.2 225 14-281 108-360 (361)
195 3e5z_A Putative gluconolactona 99.4 2.5E-10 8.7E-15 98.9 23.6 201 59-298 20-245 (296)
196 3iuj_A Prolyl endopeptidase; h 99.4 8.9E-11 3E-15 114.2 22.6 252 9-307 124-412 (693)
197 1xip_A Nucleoporin NUP159; bet 99.3 3.4E-11 1.2E-15 108.4 16.7 176 68-287 39-232 (388)
198 3hrp_A Uncharacterized protein 99.3 3.6E-09 1.2E-13 96.4 29.9 237 15-297 132-408 (409)
199 3g4e_A Regucalcin; six bladed 99.3 1.5E-08 5.2E-13 87.9 31.8 235 10-288 9-261 (297)
200 3no2_A Uncharacterized protein 99.3 2.4E-10 8.2E-15 98.6 19.5 186 80-301 5-197 (276)
201 1xip_A Nucleoporin NUP159; bet 99.3 5.5E-11 1.9E-15 107.0 15.9 183 15-241 39-230 (388)
202 1qks_A Cytochrome CD1 nitrite 99.3 1.1E-08 3.8E-13 96.9 31.7 246 21-311 163-437 (567)
203 2qc5_A Streptogramin B lactona 99.3 3.6E-08 1.2E-12 84.7 31.1 237 13-296 61-297 (300)
204 2mad_H Methylamine dehydrogena 99.2 1.9E-08 6.4E-13 90.5 29.5 244 18-306 70-357 (373)
205 2ghs_A AGR_C_1268P; regucalcin 99.2 7.4E-08 2.5E-12 84.8 32.1 226 15-287 50-290 (326)
206 3dr2_A Exported gluconolactona 99.2 1.2E-08 4.2E-13 88.8 26.2 234 13-294 44-302 (305)
207 2qe8_A Uncharacterized protein 99.2 2.9E-09 1E-13 94.5 21.8 241 14-295 17-317 (343)
208 3dsm_A Uncharacterized protein 99.2 1.3E-08 4.4E-13 89.8 25.2 217 33-300 15-254 (328)
209 1yr2_A Prolyl oligopeptidase; 99.2 3.3E-09 1.1E-13 103.9 23.1 242 22-301 115-395 (741)
210 1rwi_B Serine/threonine-protei 99.2 3E-09 1E-13 90.4 19.6 199 12-255 65-264 (270)
211 3sjl_D Methylamine dehydrogena 99.1 3.4E-08 1.2E-12 88.6 25.6 247 19-310 83-374 (386)
212 3hrp_A Uncharacterized protein 99.0 5.7E-07 2E-11 81.8 29.0 205 67-307 131-361 (409)
213 3c75_H MADH, methylamine dehyd 99.0 1.3E-07 4.4E-12 86.1 24.1 245 18-307 122-410 (426)
214 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 1.6E-06 5.5E-11 75.0 26.7 202 64-300 15-257 (314)
215 3g4e_A Regucalcin; six bladed 98.9 4.6E-06 1.6E-10 72.1 27.0 202 63-301 9-231 (297)
216 1mda_H Methylamine dehydrogena 98.8 2.5E-07 8.4E-12 82.8 18.8 240 7-300 61-347 (368)
217 3iuj_A Prolyl endopeptidase; h 98.8 1.1E-07 3.8E-12 92.4 17.5 201 64-298 126-358 (693)
218 2qe8_A Uncharacterized protein 98.8 1.3E-06 4.6E-11 77.2 21.8 203 11-252 64-318 (343)
219 2ece_A 462AA long hypothetical 98.8 2.3E-05 8E-10 71.1 29.7 231 20-287 88-399 (462)
220 2hz6_A Endoplasmic reticulum t 98.8 8.5E-09 2.9E-13 92.6 7.2 183 79-301 8-194 (369)
221 2mad_H Methylamine dehydrogena 98.7 9.8E-05 3.3E-09 66.1 32.0 241 20-306 27-314 (373)
222 3dr2_A Exported gluconolactona 98.7 2.9E-06 9.8E-11 73.6 20.6 199 59-297 37-265 (305)
223 2ghs_A AGR_C_1268P; regucalcin 98.6 4.3E-05 1.5E-09 67.0 26.8 192 69-297 51-258 (326)
224 2hz6_A Endoplasmic reticulum t 98.6 2.2E-08 7.4E-13 89.9 4.6 206 24-282 8-217 (369)
225 1kb0_A Quinohemoprotein alcoho 98.6 9E-06 3.1E-10 78.7 22.8 53 246-302 457-510 (677)
226 1yiq_A Quinohemoprotein alcoho 98.6 7.9E-06 2.7E-10 79.3 22.1 54 245-302 454-508 (689)
227 3sjl_D Methylamine dehydrogena 98.5 6E-05 2.1E-09 67.5 23.1 225 19-287 38-298 (386)
228 2ece_A 462AA long hypothetical 98.4 5.9E-05 2E-09 68.5 22.4 201 81-309 97-362 (462)
229 1k3i_A Galactose oxidase precu 98.4 2.5E-05 8.4E-10 75.4 20.4 255 18-310 190-507 (656)
230 2iwa_A Glutamine cyclotransfer 98.4 0.00013 4.6E-09 61.8 22.5 198 14-255 21-237 (266)
231 2fp8_A Strictosidine synthase; 98.3 0.0003 1E-08 61.2 23.8 237 14-299 19-313 (322)
232 1fwx_A Nitrous oxide reductase 98.3 0.00023 7.7E-09 66.9 22.8 253 23-316 99-447 (595)
233 2p4o_A Hypothetical protein; p 98.2 0.0019 6.6E-08 55.6 27.0 232 14-289 32-278 (306)
234 3nol_A Glutamine cyclotransfer 98.2 0.00034 1.2E-08 58.9 20.6 196 57-288 32-244 (262)
235 2iwa_A Glutamine cyclotransfer 98.2 0.0019 6.5E-08 54.7 25.5 210 56-299 9-237 (266)
236 3nol_A Glutamine cyclotransfer 98.2 0.0004 1.4E-08 58.5 20.3 183 13-242 42-243 (262)
237 3nok_A Glutaminyl cyclase; bet 98.1 0.0007 2.4E-08 57.1 19.8 195 57-288 44-254 (268)
238 1yiq_A Quinohemoprotein alcoho 98.1 0.0015 5.2E-08 63.2 24.9 109 25-150 70-197 (689)
239 3hxj_A Pyrrolo-quinoline quino 98.1 0.00089 3E-08 57.8 21.3 217 25-298 107-323 (330)
240 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0011 3.8E-08 58.7 22.3 228 24-301 102-339 (376)
241 1npe_A Nidogen, entactin; glyc 98.1 0.0038 1.3E-07 52.4 28.8 239 26-305 2-244 (267)
242 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0055 1.9E-07 54.1 29.9 229 24-301 52-298 (376)
243 3nok_A Glutaminyl cyclase; bet 98.0 0.0013 4.3E-08 55.5 19.5 182 13-242 54-253 (268)
244 3mbr_X Glutamine cyclotransfer 98.0 0.0036 1.2E-07 52.1 21.9 197 56-288 9-223 (243)
245 1kb0_A Quinohemoprotein alcoho 98.0 0.0017 5.8E-08 62.8 22.9 104 25-148 77-202 (677)
246 3mbr_X Glutamine cyclotransfer 98.0 0.0049 1.7E-07 51.3 22.5 184 13-242 20-222 (243)
247 1npe_A Nidogen, entactin; glyc 98.0 0.0058 2E-07 51.3 26.9 222 15-281 37-263 (267)
248 3c75_H MADH, methylamine dehyd 97.9 0.0013 4.4E-08 59.8 19.8 190 76-299 80-295 (426)
249 1k3i_A Galactose oxidase precu 97.9 0.00037 1.3E-08 67.1 17.0 231 18-288 247-530 (656)
250 2xbg_A YCF48-like protein; pho 97.9 0.0099 3.4E-07 51.8 27.3 248 13-307 35-286 (327)
251 1kv9_A Type II quinohemoprotei 97.9 0.0024 8.2E-08 61.6 21.5 55 244-302 436-491 (668)
252 3qqz_A Putative uncharacterize 97.8 0.011 3.6E-07 49.8 26.3 208 61-297 21-249 (255)
253 3v65_B Low-density lipoprotein 97.8 0.016 5.6E-07 51.7 27.5 245 17-306 80-325 (386)
254 2xbg_A YCF48-like protein; pho 97.7 0.021 7.2E-07 49.7 24.6 235 13-296 79-319 (327)
255 3v64_C Agrin; beta propeller, 97.7 0.024 8.3E-07 49.8 29.8 248 14-306 34-282 (349)
256 2xe4_A Oligopeptidase B; hydro 97.7 0.003 1E-07 61.8 19.2 199 68-298 175-397 (751)
257 2vpj_A Kelch-like protein 12; 97.7 0.021 7.2E-07 48.7 24.0 198 80-311 63-289 (301)
258 2p4o_A Hypothetical protein; p 97.7 0.023 7.8E-07 48.8 27.0 214 56-307 22-248 (306)
259 3hxj_A Pyrrolo-quinoline quino 97.6 0.0017 5.7E-08 56.1 15.0 176 80-297 107-282 (330)
260 1mda_H Methylamine dehydrogena 97.6 0.0037 1.2E-07 55.7 16.5 236 15-302 20-306 (368)
261 2xe4_A Oligopeptidase B; hydro 97.5 0.021 7E-07 55.8 22.7 117 10-144 169-303 (751)
262 3tc9_A Hypothetical hydrolase; 97.5 0.055 1.9E-06 49.1 25.1 155 15-207 138-301 (430)
263 2ad6_A Methanol dehydrogenase 97.5 0.051 1.7E-06 51.3 24.0 55 244-302 442-497 (571)
264 3p5b_L Low density lipoprotein 97.4 0.07 2.4E-06 47.9 27.5 232 34-306 91-327 (400)
265 1w6s_A Methanol dehydrogenase 97.3 0.078 2.7E-06 50.3 23.7 56 245-304 452-509 (599)
266 3ii7_A Kelch-like protein 7; p 97.3 0.061 2.1E-06 45.9 24.9 197 80-311 56-283 (306)
267 2fp8_A Strictosidine synthase; 97.3 0.066 2.3E-06 46.1 26.5 186 69-288 21-248 (322)
268 2xn4_A Kelch-like protein 2; s 97.3 0.074 2.5E-06 45.3 23.8 199 80-310 62-287 (302)
269 1kv9_A Type II quinohemoprotei 97.2 0.065 2.2E-06 51.5 21.7 63 25-102 66-139 (668)
270 1flg_A Protein (quinoprotein e 97.2 0.17 5.7E-06 47.8 24.9 53 245-301 465-518 (582)
271 1fwx_A Nitrous oxide reductase 97.2 0.053 1.8E-06 50.9 19.8 204 79-299 100-361 (595)
272 4hw6_A Hypothetical protein, I 97.1 0.14 4.7E-06 46.5 25.0 209 69-307 141-380 (433)
273 4hw6_A Hypothetical protein, I 97.1 0.17 5.8E-06 45.9 25.4 238 15-298 140-432 (433)
274 4a2l_A BT_4663, two-component 97.0 0.29 1E-05 47.8 27.9 245 13-305 309-576 (795)
275 1ijq_A LDL receptor, low-densi 97.0 0.15 5.1E-06 43.9 29.2 232 34-306 9-245 (316)
276 1zgk_A Kelch-like ECH-associat 97.0 0.15 5.2E-06 43.5 22.7 114 189-311 170-298 (308)
277 4a2l_A BT_4663, two-component 96.9 0.37 1.3E-05 47.1 28.7 230 13-293 405-654 (795)
278 3ii7_A Kelch-like protein 7; p 96.8 0.15 5.3E-06 43.3 18.4 189 24-256 55-273 (306)
279 3m0c_C LDL receptor, low-densi 96.7 0.52 1.8E-05 46.1 29.1 212 65-306 422-639 (791)
280 3amr_A 3-phytase; beta-propell 96.6 0.31 1E-05 42.7 21.3 198 24-255 39-263 (355)
281 2p9w_A MAL S 1 allergenic prot 96.6 0.33 1.1E-05 42.1 21.5 223 62-314 8-277 (334)
282 3v9f_A Two-component system se 96.5 0.66 2.3E-05 45.2 25.8 247 13-297 257-522 (781)
283 1n7d_A LDL receptor, low-densi 96.5 0.011 3.7E-07 57.3 10.0 202 67-300 406-615 (699)
284 3pbp_A Nucleoporin NUP82; beta 96.5 0.041 1.4E-06 49.5 12.7 124 15-140 67-207 (452)
285 2xn4_A Kelch-like protein 2; s 96.4 0.35 1.2E-05 41.0 20.0 189 24-256 61-277 (302)
286 3v65_B Low-density lipoprotein 96.4 0.49 1.7E-05 42.0 23.8 180 88-298 94-276 (386)
287 3v9f_A Two-component system se 96.4 0.83 2.8E-05 44.5 24.9 236 13-296 362-608 (781)
288 3tc9_A Hypothetical hydrolase; 96.4 0.56 1.9E-05 42.4 25.5 157 69-255 139-301 (430)
289 2vpj_A Kelch-like protein 12; 96.3 0.42 1.4E-05 40.4 21.6 189 24-256 62-279 (301)
290 1n7d_A LDL receptor, low-densi 96.1 0.041 1.4E-06 53.2 11.3 205 15-255 407-614 (699)
291 4asc_A Kelch repeat and BTB do 96.0 0.61 2.1E-05 39.8 23.1 112 189-309 150-286 (315)
292 1ijq_A LDL receptor, low-densi 95.9 0.7 2.4E-05 39.7 25.8 205 15-255 31-238 (316)
293 3qqz_A Putative uncharacterize 95.8 0.66 2.3E-05 38.7 28.6 204 10-251 23-249 (255)
294 1zgk_A Kelch-like ECH-associat 95.7 0.8 2.7E-05 38.9 17.7 145 80-255 122-287 (308)
295 2ism_A Putative oxidoreductase 95.7 1 3.4E-05 39.4 27.2 102 15-131 32-151 (352)
296 3sov_A LRP-6, low-density lipo 95.4 1.2 4E-05 38.4 25.6 233 34-306 12-245 (318)
297 2uvk_A YJHT; unknown function, 95.4 1.2 4.1E-05 38.6 19.0 42 199-246 286-327 (357)
298 3a9g_A Putative uncharacterize 95.2 1.4 4.9E-05 38.5 25.5 66 222-287 260-330 (354)
299 2p9w_A MAL S 1 allergenic prot 95.1 1.5 5.3E-05 37.9 18.8 210 11-255 10-265 (334)
300 4asc_A Kelch repeat and BTB do 95.0 1.4 4.8E-05 37.4 21.5 103 198-310 117-231 (315)
301 3v64_C Agrin; beta propeller, 95.0 1.6 5.6E-05 38.0 25.7 196 16-253 75-273 (349)
302 2uvk_A YJHT; unknown function, 94.8 1.8 6.1E-05 37.5 18.1 52 80-135 66-128 (357)
303 3sre_A PON1, serum paraoxonase 94.7 2.1 7.1E-05 37.6 26.1 205 15-253 51-296 (355)
304 2ism_A Putative oxidoreductase 94.5 1.9 6.3E-05 37.7 16.1 120 162-301 33-178 (352)
305 1flg_A Protein (quinoprotein e 94.4 3.4 0.00012 38.8 20.6 24 81-104 337-360 (582)
306 1cru_A Protein (soluble quinop 94.4 2.3 7.9E-05 38.6 16.7 101 188-288 38-163 (454)
307 3m0c_C LDL receptor, low-densi 94.4 4.2 0.00014 39.8 25.4 182 89-297 403-587 (791)
308 2woz_A Kelch repeat and BTB do 94.3 2.2 7.6E-05 36.2 19.1 51 80-134 110-167 (318)
309 2woz_A Kelch repeat and BTB do 94.2 2.3 8E-05 36.1 23.0 109 189-306 160-293 (318)
310 3kya_A Putative phosphatase; s 94.0 3.7 0.00013 37.7 25.0 214 69-308 141-417 (496)
311 2zwa_A Leucine carboxyl methyl 93.9 4.7 0.00016 38.7 18.8 200 80-305 398-640 (695)
312 3sre_A PON1, serum paraoxonase 93.8 3.1 0.00011 36.4 23.6 176 88-289 81-287 (355)
313 3pbp_A Nucleoporin NUP82; beta 93.8 3.7 0.00013 36.9 18.5 71 220-292 124-205 (452)
314 3a9g_A Putative uncharacterize 93.7 1.7 5.9E-05 38.0 14.1 110 191-302 42-179 (354)
315 3kya_A Putative phosphatase; s 93.5 4.5 0.00015 37.1 28.9 247 15-300 140-476 (496)
316 3das_A Putative oxidoreductase 93.4 1.2 4.1E-05 39.0 12.4 124 162-302 34-184 (347)
317 3amr_A 3-phytase; beta-propell 93.1 4.1 0.00014 35.6 28.7 199 72-299 30-263 (355)
318 3p5b_L Low density lipoprotein 93.1 4.4 0.00015 35.9 28.3 206 14-255 112-320 (400)
319 3sov_A LRP-6, low-density lipo 93.0 4 0.00014 35.0 20.4 181 89-298 12-196 (318)
320 4a0p_A LRP6, LRP-6, low-densit 92.9 6.4 0.00022 37.3 29.7 231 33-306 13-244 (628)
321 1w6s_A Methanol dehydrogenase 92.9 6.4 0.00022 37.1 23.6 55 198-257 278-344 (599)
322 2ad6_A Methanol dehydrogenase 92.3 7.2 0.00025 36.4 26.8 68 80-150 115-190 (571)
323 2zwa_A Leucine carboxyl methyl 92.0 8.9 0.0003 36.8 21.0 183 79-288 451-674 (695)
324 2g8s_A Glucose/sorbosone dehyd 87.7 3.5 0.00012 35.9 10.0 109 162-288 20-149 (353)
325 3s94_A LRP-6, low-density lipo 87.5 19 0.00066 33.9 24.7 228 34-302 17-246 (619)
326 3das_A Putative oxidoreductase 86.2 16 0.00055 31.7 28.3 107 15-132 33-157 (347)
327 2cn3_A Xyloglucanase, beta-1,4 85.0 28 0.00097 33.5 19.9 224 67-308 23-291 (737)
328 3ei3_A DNA damage-binding prot 85.0 37 0.0013 34.8 31.3 234 15-288 515-756 (1158)
329 2wg3_C Hedgehog-interacting pr 82.7 22 0.00076 32.2 13.0 100 191-290 29-160 (463)
330 1tl2_A L10, protein (tachylect 81.3 5 0.00017 32.7 7.2 61 224-292 91-156 (236)
331 1tl2_A L10, protein (tachylect 81.1 21 0.00071 29.1 13.1 151 114-300 42-209 (236)
332 3b7f_A Glycosyl hydrolase, BNR 78.8 32 0.0011 29.9 23.0 34 272-307 344-379 (394)
333 2be1_A Serine/threonine-protei 77.6 24 0.00083 30.5 11.0 121 80-214 10-137 (339)
334 4a0p_A LRP6, LRP-6, low-densit 76.2 53 0.0018 31.0 25.7 181 88-298 13-196 (628)
335 2g8s_A Glucose/sorbosone dehyd 74.8 40 0.0014 29.0 25.1 76 222-298 272-351 (353)
336 1sqj_A OXG-RCBH, oligoxylogluc 73.3 70 0.0024 31.1 20.6 66 66-132 14-83 (789)
337 4gq2_M Nucleoporin NUP120; bet 64.4 61 0.0021 32.3 11.8 32 270-301 237-268 (950)
338 1cru_A Protein (soluble quinop 56.8 1.1E+02 0.0038 27.4 19.4 65 66-133 26-99 (454)
339 3a0f_A Xyloglucanase; beta-pro 54.4 1.6E+02 0.0053 28.4 22.6 88 65-153 19-119 (763)
340 4gq2_M Nucleoporin NUP120; bet 48.2 31 0.0011 34.4 6.6 30 15-44 237-266 (950)
341 3b7f_A Glycosyl hydrolase, BNR 44.6 1.5E+02 0.0052 25.4 21.1 53 80-133 22-75 (394)
342 4fhn_B Nucleoporin NUP120; pro 43.0 19 0.00065 36.7 4.2 31 271-301 240-270 (1139)
343 4fhn_B Nucleoporin NUP120; pro 42.8 31 0.0011 35.1 5.8 30 15-44 239-268 (1139)
344 1sqj_A OXG-RCBH, oligoxylogluc 40.6 1.1E+02 0.0037 29.7 9.0 85 220-308 14-109 (789)
345 3sbq_A Nitrous-oxide reductase 38.8 1.1E+02 0.0038 28.6 8.1 81 15-99 324-408 (638)
346 3s25_A Hypothetical 7-bladed b 37.9 1.8E+02 0.006 24.3 17.0 92 193-301 162-255 (302)
347 3ei3_A DNA damage-binding prot 37.8 3.5E+02 0.012 27.6 30.7 205 68-304 515-729 (1158)
348 3f7f_A Nucleoporin NUP120; nuc 37.4 53 0.0018 31.6 5.9 28 15-44 223-250 (729)
349 2be1_A Serine/threonine-protei 33.6 2.3E+02 0.0078 24.3 10.3 109 27-147 12-132 (339)
350 3f7f_A Nucleoporin NUP120; nuc 33.1 75 0.0026 30.5 6.3 37 68-108 223-259 (729)
351 2cn3_A Xyloglucanase, beta-1,4 33.0 3.3E+02 0.011 26.0 16.6 173 114-307 24-238 (737)
352 2wg3_C Hedgehog-interacting pr 30.8 2.9E+02 0.01 24.7 13.2 29 15-43 15-44 (463)
353 3s94_A LRP-6, low-density lipo 27.9 3.7E+02 0.013 25.0 27.7 162 67-257 349-512 (619)
354 3a0f_A Xyloglucanase; beta-pro 24.9 4.2E+02 0.014 25.4 10.2 85 219-307 19-120 (763)
355 3sbq_A Nitrous-oxide reductase 23.6 2.3E+02 0.0079 26.6 7.4 72 223-299 325-408 (638)
356 1uhe_A Aspartate 1-decarboxyla 21.5 1.2E+02 0.004 20.8 3.8 29 90-118 17-45 (97)
357 1zso_A Hypothetical protein; s 21.0 1.6E+02 0.0055 22.3 5.1 34 273-308 114-148 (164)
No 1
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7e-50 Score=354.59 Aligned_cols=301 Identities=62% Similarity=1.137 Sum_probs=228.9
Q ss_pred CcccceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCC
Q psy2762 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80 (318)
Q Consensus 1 ~~~~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~ 80 (318)
|...+..+..||++.|++++|+|+|++|+||+.|++|+|||+... ....+.++++|.+.|++++|++|.++
T Consensus 1 ~~~~~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~---------~~~~~~~l~gH~~~V~~v~~~~~~~~ 71 (316)
T 3bg1_A 1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG---------GQILIADLRGHEGPVWQVAWAHPMYG 71 (316)
T ss_dssp -------------CCEEEEEECGGGCEEEEEETTTEEEEEEEETT---------EEEEEEEEECCSSCEEEEEECCGGGS
T ss_pred CcceeeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC---------CcEEEEEEcCCCccEEEEEeCCCCCC
Confidence 344566778899999999999999999999999999999998632 12357789999999999999765458
Q ss_pred cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-eeeecccc
Q psy2762 81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHT 159 (318)
Q Consensus 81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-~~~~~~h~ 159 (318)
++|+||+.|++|++||+.++.+.....+.+|...|++++|+|+..+.++++|+.|++|++|++.... .+. ...+.+|.
T Consensus 72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~-~~~~~~~~~~h~ 150 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG-QWEVKKINNAHT 150 (316)
T ss_dssp SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS-CEEECCBTTSSS
T ss_pred CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC-Ccceeeeecccc
Confidence 9999999999999999987654455667889999999999998656789999999999999985432 122 22345899
Q ss_pred cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEcccCCCCeeEEEEccCCCCCccE
Q psy2762 160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238 (318)
Q Consensus 160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~ 238 (318)
.++..++|+|+.................+.+||+|+.|++|+|||+... .+.....+.+|..+|++|+|+|+...++.+
T Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred CCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 9999999999742211111110011111358999999999999998743 334556789999999999999974333579
Q ss_pred EEEEeCCCeEEEEEcCCCc--ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 311 (318)
Q Consensus 239 l~s~s~D~~i~vw~~~~~~--~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~ 311 (318)
|+|++.|++|+||++.... .+....+..|...|++++|+|+|++||+++.|++|+||+....|+|.++.++..
T Consensus 231 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred EEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccC
Confidence 9999999999999987621 122334567889999999999999999999999999999998999999998875
No 2
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.9e-48 Score=340.33 Aligned_cols=288 Identities=47% Similarity=0.916 Sum_probs=226.0
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
+..||++.|++++|+|+|++|+||+.|++|+|||++.. ..+++.++.+|.++|++++|+++.++++||||+
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~---------~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s 74 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE---------THKLIDTLTGHEGPVWRVDWAHPKFGTILASCS 74 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS---------CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC---------CcEEEEEEccccCCeEEEEecCCCcCCEEEEEc
Confidence 45799999999999999999999999999999998621 235678899999999999997654589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|++|+|||+.++.......+.+|...|.+++|+|++.+.++++++.|++|++|++..... .....+.+|..++.+++|
T Consensus 75 ~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~-~~~~~~~~h~~~v~~~~~ 153 (297)
T 2pm7_B 75 YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVNSASW 153 (297)
T ss_dssp TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-BCCEEEECCSSCEEEEEE
T ss_pred CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-eeeeeeecccCccceEee
Confidence 9999999999876543445567899999999999975467899999999999999854421 223445689999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D 245 (318)
+|+..... . . ......+.+||+|+.|++|+|||+..++ ......+.+|..+|++|+|+|+. ..+.+|+|+|.|
T Consensus 154 ~p~~~~~~--~-~-~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~-~~~~~las~s~D 228 (297)
T 2pm7_B 154 APATIEED--G-E-HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYMASVSQD 228 (297)
T ss_dssp CCCC----------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC-SSSEEEEEEETT
T ss_pred cCCccccc--c-c-CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC-CCceEEEEEECC
Confidence 99631100 0 0 0000113589999999999999987653 33456788999999999999962 115799999999
Q ss_pred CeEEEEEcCCCc-ceeeEEe--eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeec
Q psy2762 246 RKVIIWTSNDYV-TWTPFIM--NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 310 (318)
Q Consensus 246 ~~i~vw~~~~~~-~~~~~~~--~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~ 310 (318)
++|+||++.... .+....+ ..|...|++++|+|+|++||+++.|++|+||+.+..|.|+++.+|.
T Consensus 229 ~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~~~~ 296 (297)
T 2pm7_B 229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVH 296 (297)
T ss_dssp SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC----
T ss_pred CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEeccccc
Confidence 999999987632 1222233 4577899999999999999999999999999999999999988763
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.9e-44 Score=315.83 Aligned_cols=260 Identities=16% Similarity=0.195 Sum_probs=220.0
Q ss_pred ccceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL 82 (318)
Q Consensus 3 ~~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~ 82 (318)
..+.+.+.+|.+.|++++|+|+|++|++|+.||+|+|||+. ++..+..+.+|..+|.++.|++ ++++
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~-----------~~~~~~~~~~~~~~v~~~~~~~--~~~~ 69 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE-----------TQVEVRSIQVTETPVRAGKFIA--RKNW 69 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCSSCEEEEEEEG--GGTE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-----------CCceeEEeeccCCcEEEEEEeC--CCCE
Confidence 34566778999999999999999999999999999999996 3567889999999999999974 5899
Q ss_pred EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762 83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC 162 (318)
Q Consensus 83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v 162 (318)
|++|+.|++|++||+.+++. ...+.+|...|.+++|+|+ +.++++|+.|++|++||+.... .....+.+|...|
T Consensus 70 l~s~s~d~~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~--~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~~h~~~v 143 (304)
T 2ynn_A 70 IIVGSDDFRIRVFNYNTGEK--VVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFV 143 (304)
T ss_dssp EEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEEGGGTT--EEEEEECCCCSCE
T ss_pred EEEECCCCEEEEEECCCCcE--EEEEeCCCCcEEEEEEcCC--CCEEEEECCCCeEEEEECCCCc--chhhhhcccCCcE
Confidence 99999999999999998864 4456789999999999998 6789999999999999985442 1234456899999
Q ss_pred ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762 163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242 (318)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~ 242 (318)
.+++|+|.. +..||+|+.|++|+|||+....... ....+|...|..+.|+|. .++.+|+++
T Consensus 144 ~~v~~~p~~----------------~~~l~sgs~D~~v~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~--~~~~~l~s~ 204 (304)
T 2ynn_A 144 MCVAFNPKD----------------PSTFASGCLDRTVKVWSLGQSTPNF-TLTTGQERGVNYVDYYPL--PDKPYMITA 204 (304)
T ss_dssp EEEEECTTC----------------TTEEEEEETTSEEEEEETTCSSCSE-EEECCCTTCEEEEEECCS--TTCCEEEEE
T ss_pred EEEEECCCC----------------CCEEEEEeCCCeEEEEECCCCCccc-eeccCCcCcEEEEEEEEc--CCCCEEEEE
Confidence 999999952 3689999999999999987654322 223467788999999984 246799999
Q ss_pred eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
+.|++|+|||+.... ....+.+|...|..++|+|++++|++++.||+|+|||..+...
T Consensus 205 s~D~~i~iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 205 SDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp ETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred cCCCeEEEEeCCCCc--cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 999999999998754 3456778999999999999999999999999999999776543
No 4
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-43 Score=314.43 Aligned_cols=261 Identities=26% Similarity=0.459 Sum_probs=212.4
Q ss_pred ecCCCcc-eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEE-EEecccccCeEEEEecCCCCCcEEEE
Q psy2762 8 VDTGHED-MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQFGTLLAS 85 (318)
Q Consensus 8 ~~~gH~~-~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~~~~~~~~las 85 (318)
...+|.+ .|.+++|+|+|++|++|+.|++|+|||+... ..... ....+|.+.|.+++|++ ++++||+
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~---------~~~~~~~~~~~h~~~v~~~~~sp--~g~~l~s 78 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGD---------SWICKSVLSEGHQRTVRKVAWSP--CGNYLAS 78 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETT---------EEEEEEEECSSCSSCEEEEEECT--TSSEEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCC---------cceeeeeeccccCCcEEEEEECC--CCCEEEE
Confidence 3468988 9999999999999999999999999998632 11112 23468999999999974 5899999
Q ss_pred EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762 86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV 165 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~ 165 (318)
|+.|++|+|||+..+.......+.+|...|.+++|+|+ +.+|++|+.|++|++|++...........+.+|...|..+
T Consensus 79 ~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp EETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred EECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCC--CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence 99999999999887765566778899999999999998 7799999999999999986543222234456899999999
Q ss_pred eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D 245 (318)
+|+|+ +.+||+|+.|++|++||...+++.....+.+|...|++|+|+|+ +.+|++++.|
T Consensus 157 ~~~p~-----------------~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~----g~~l~s~s~D 215 (345)
T 3fm0_A 157 VWHPS-----------------QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS----GQRLASCSDD 215 (345)
T ss_dssp EECSS-----------------SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTT----SSEEEEEETT
T ss_pred EECCC-----------------CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCC----CCEEEEEeCC
Confidence 99997 46899999999999999988876667788999999999999996 8899999999
Q ss_pred CeEEEEEcCCCc--------------------------------------------------cee---------------
Q psy2762 246 RKVIIWTSNDYV--------------------------------------------------TWT--------------- 260 (318)
Q Consensus 246 ~~i~vw~~~~~~--------------------------------------------------~~~--------------- 260 (318)
++|+||+..... .|.
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~ 295 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLT 295 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEE
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEE
Confidence 999999852100 000
Q ss_pred eEEeeecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCCCc
Q psy2762 261 PFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 261 ~~~~~~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
.....+|...|++|+|+|++ .+|||++.||+|+||+......
T Consensus 296 ~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 00112567889999999998 4999999999999999877543
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-42 Score=318.49 Aligned_cols=257 Identities=21% Similarity=0.363 Sum_probs=220.7
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...||.+.|++++|+|++.+|+||+.|++|+|||+. ++..+.++++|.+.|++++|++ ++++|++|+
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~-----------~~~~~~~l~~h~~~V~~v~~~~--~~~~l~sgs 169 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE-----------TGDFERTLKGHTDSVQDISFDH--SGKLLASCS 169 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETT-----------TCCCCEEECCCSSCEEEEEECT--TSSEEEEEE
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-----------CCcEEEEEeccCCcEEEEEEcC--CCCEEEEEe
Confidence 456999999999999999999999999999999986 3456788999999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|++|+|||+.+.+ +...+.+|...|.+++|+|+ +.++++|+.|++|++||+..+. ....+.+|...+..+.|
T Consensus 170 ~D~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~~p~--~~~l~s~s~D~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~ 242 (410)
T 1vyh_C 170 ADMTIKLWDFQGFE--CIRTMHGHDHNVSSVSIMPN--GDHIVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRP 242 (410)
T ss_dssp TTSCCCEEETTSSC--EEECCCCCSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEE
T ss_pred CCCeEEEEeCCCCc--eeEEEcCCCCCEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEeCCCccEEEEEE
Confidence 99999999998776 44567789999999999998 6789999999999999985443 34566789999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCC-------------
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL------------- 234 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~------------- 234 (318)
+|+ +.+|++|+.|++|++||+.++++ ...+.+|...|.+++|+|+...
T Consensus 243 ~~~-----------------g~~l~s~s~D~~v~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (410)
T 1vyh_C 243 NQD-----------------GTLIASCSNDQTVRVWVVATKEC--KAELREHRHVVECISWAPESSYSSISEATGSETKK 303 (410)
T ss_dssp CTT-----------------SSEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred CCC-----------------CCEEEEEcCCCeEEEEECCCCce--eeEecCCCceEEEEEEcCcccccchhhhccccccc
Confidence 997 47899999999999999988764 4567899999999999996321
Q ss_pred ---CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762 235 ---SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305 (318)
Q Consensus 235 ---~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~ 305 (318)
.+.+|++++.|++|++||+.... ....+.+|...|.+++|+|+|++|++++.|++|+|||...+.....
T Consensus 304 ~~~~g~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~ 375 (410)
T 1vyh_C 304 SGKPGPFLLSGSRDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT 375 (410)
T ss_dssp ----CCEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEE
T ss_pred cCCCCCEEEEEeCCCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 25689999999999999998754 3455678999999999999999999999999999999876544443
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-42 Score=305.52 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=213.1
Q ss_pred eecCCCcceeeeeeecCC----CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762 7 LVDTGHEDMIHDAEMDYL----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL 82 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~----g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~ 82 (318)
+...+|++.|.+++|+|+ +.+|+|||.|++|+|||+... ......++.+|...|.+++|++ ++.+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~---------~~~~~~~l~gh~~~v~~~~~~~--~~~~ 94 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE---------RLDLQWSLEGHQLGVVSVDISH--TLPI 94 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT---------EEEEEEEECCCSSCEEEEEECS--SSSE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC---------CeeeeeeeccCCCCEEEEEECC--CCCE
Confidence 345799999999999875 679999999999999998632 2234567899999999999974 4889
Q ss_pred EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762 83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC 162 (318)
Q Consensus 83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v 162 (318)
++|++.|++|++||+.+++. ...+..|...+.+++|+|+ +.++++++.|+.|++|+..... ....+..|...+
T Consensus 95 l~s~s~D~~i~lWd~~~~~~--~~~~~~~~~~~~~~~~spd--g~~l~~g~~dg~v~i~~~~~~~---~~~~~~~~~~~v 167 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENGKQ--IKSIDAGPVDAWTLAFSPD--SQYLATGTHVGKVNIFGVESGK---KEYSLDTRGKFI 167 (321)
T ss_dssp EEEEETTSEEEEEETTTTEE--EEEEECCTTCCCCEEECTT--SSEEEEECTTSEEEEEETTTCS---EEEEEECSSSCE
T ss_pred EEEEeCCCcEEEEECCCCCE--EEEEeCCCccEEEEEECCC--CCEEEEEcCCCcEEEEEcCCCc---eeEEecCCCceE
Confidence 99999999999999998764 3455678889999999998 7799999999999999975443 234455788889
Q ss_pred ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762 163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242 (318)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~ 242 (318)
.+++|+|+ +++||+|+.|+.|+|||+.+++. ...+++|...|++++|+|+ +.+|+++
T Consensus 168 ~~~~~spd-----------------g~~lasg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spd----~~~l~s~ 224 (321)
T 3ow8_A 168 LSIAYSPD-----------------GKYLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPD----SQLLVTA 224 (321)
T ss_dssp EEEEECTT-----------------SSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCCCEEEECTT----SCEEEEE
T ss_pred EEEEECCC-----------------CCEEEEEcCCCeEEEEECCCCcE--EEEEcccCCceeEEEEcCC----CCEEEEE
Confidence 99999997 57899999999999999988864 4567899999999999996 7899999
Q ss_pred eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
+.|++|+|||+.... ....+.+|...|.+++|+|+|++|++++.|++|+|||+..+
T Consensus 225 s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 225 SDDGYIKIYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp CTTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cCCCeEEEEECCCcc--eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 999999999998654 24456789999999999999999999999999999998765
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=308.89 Aligned_cols=251 Identities=20% Similarity=0.188 Sum_probs=201.6
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg 90 (318)
.|+..|++++|+|++ +|++|+.||+|+|||++... ........+.+|.+.|++++|++ ++++|+||+.|+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~-------~~~~~~~~~~~H~~~V~~v~~sp--dg~~l~sgs~d~ 149 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENE-------TLIVSKFCKYEHDDIVSTVSVLS--SGTQAVSGSKDI 149 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTS-------SCEEEEEEEECCSSCEEEEEECT--TSSEEEEEETTS
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCC-------ceeEeeccccCCCCCEEEEEECC--CCCEEEEEeCCC
Confidence 356789999999985 68899999999999997431 01122345679999999999974 599999999999
Q ss_pred eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee--cccccccceeeeC
Q psy2762 91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI--AAHTIGCNAVSWG 168 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~--~~h~~~v~~~~~~ 168 (318)
+|++||+.+++ ....+.+|...|.+++|+|++ ..++++++.|++|++||+..... ...+ ..|...+.+++|+
T Consensus 150 ~i~iwd~~~~~--~~~~~~~h~~~V~~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 150 CIKVWDLAQQV--VLSSYRAHAAQVTCVAASPHK-DSVFLSCSEDNRILLWDTRCPKP---ASQIGCSAPGYLPTSLAWH 223 (344)
T ss_dssp CEEEEETTTTE--EEEEECCCSSCEEEEEECSSC-TTEEEEEETTSCEEEEETTSSSC---EEECC----CCCEEEEEEC
T ss_pred eEEEEECCCCc--EEEEEcCcCCceEEEEecCCC-CCceeeeccccccccccccccce---eeeeecceeeccceeeeec
Confidence 99999999876 445678999999999999985 35789999999999999865432 2233 2455568899999
Q ss_pred CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248 (318)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i 248 (318)
|+. +++||+|+.|++|+|||++++++ ..++.+|...|++|+|+|+ ...+|+|+|.|++|
T Consensus 224 p~~----------------~~~l~sg~~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~---g~~~lasgs~D~~i 282 (344)
T 4gqb_B 224 PQQ----------------SEVFVFGDENGTVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPH---SVPFLASLSEDCSL 282 (344)
T ss_dssp SSC----------------TTEEEEEETTSEEEEEESCC--C--CEEEECCSSCEEEEEECSS---SSCCEEEEETTSCE
T ss_pred CCC----------------CcceEEeccCCcEEEEECCCCcE--EEEEcCCCCCEEEEEEccC---CCeEEEEEeCCCeE
Confidence 863 46799999999999999987754 4567899999999999997 24689999999999
Q ss_pred EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEECCCC
Q psy2762 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~~D~~v~iW~~~~~~ 301 (318)
+|||..... ...+.+|.+.|.+|+|+|+|+ +|+|+|.|++|++|++....
T Consensus 283 ~vwd~~~~~---~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 283 AVLDSSLSE---LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEECTTCCE---EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEECCCCc---EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999987643 345678999999999999986 57789999999999987643
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-42 Score=303.81 Aligned_cols=245 Identities=22% Similarity=0.399 Sum_probs=215.9
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...||...|.+++|++++.+++|++.|++|+|||+. .++.+..+..|...+++++|++ ++++|++++
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~-----------~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~g~ 141 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-----------NGKQIKSIDAGPVDAWTLAFSP--DSQYLATGT 141 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCTTCCCCEEECT--TSSEEEEEC
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC-----------CCCEEEEEeCCCccEEEEEECC--CCCEEEEEc
Confidence 457999999999999999999999999999999996 3567888999999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|++|++|++.+++. ...+..|...|.+++|+|+ +.++++|+.|+.|++||+..+. ....+.+|..+|.+++|
T Consensus 142 ~dg~v~i~~~~~~~~--~~~~~~~~~~v~~~~~spd--g~~lasg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~ 214 (321)
T 3ow8_A 142 HVGKVNIFGVESGKK--EYSLDTRGKFILSIAYSPD--GKYLASGAIDGIINIFDIATGK---LLHTLEGHAMPIRSLTF 214 (321)
T ss_dssp TTSEEEEEETTTCSE--EEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCCCEEEE
T ss_pred CCCcEEEEEcCCCce--eEEecCCCceEEEEEECCC--CCEEEEEcCCCeEEEEECCCCc---EEEEEcccCCceeEEEE
Confidence 999999999988764 4456678889999999998 7899999999999999975432 34556789999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 247 (318)
+|+ +.+|++|+.|++|+|||++.++. ...+.+|...|.+++|+|+ +.+|++++.|++
T Consensus 215 spd-----------------~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~sp~----~~~l~s~s~D~~ 271 (321)
T 3ow8_A 215 SPD-----------------SQLLVTASDDGYIKIYDVQHANL--AGTLSGHASWVLNVAFCPD----DTHFVSSSSDKS 271 (321)
T ss_dssp CTT-----------------SCEEEEECTTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTT----SSEEEEEETTSC
T ss_pred cCC-----------------CCEEEEEcCCCeEEEEECCCcce--eEEEcCCCCceEEEEECCC----CCEEEEEeCCCc
Confidence 997 47899999999999999987754 4567899999999999996 789999999999
Q ss_pred EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
|+|||+.+.. ....+..|.+.|++++|+|+|++|++++.|++|+|||.
T Consensus 272 v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 272 VKVWDVGTRT--CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEEeCCCCE--EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999998754 34456678999999999999999999999999999984
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.2e-42 Score=313.80 Aligned_cols=263 Identities=24% Similarity=0.404 Sum_probs=218.0
Q ss_pred eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~ 86 (318)
....||.+.|++++|+|+|++|++|+.|++|+|||+. .+.++.++.+|...|.+++|++ ++++|+||
T Consensus 144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~-----------~~~~~~~~~~h~~~V~~v~~~p--~~~~l~s~ 210 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ-----------GFECIRTMHGHDHNVSSVSIMP--NGDHIVSA 210 (410)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT-----------SSCEEECCCCCSSCEEEEEECS--SSSEEEEE
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-----------CCceeEEEcCCCCCEEEEEEeC--CCCEEEEE
Confidence 3557999999999999999999999999999999986 3467889999999999999964 58999999
Q ss_pred ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762 87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS 166 (318)
Q Consensus 87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~ 166 (318)
+.|++|++||+.++.. ...+.+|...|.+++++|+ +.++++|+.|++|++||+.... ....+.+|...+.+++
T Consensus 211 s~D~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~--g~~l~s~s~D~~v~vwd~~~~~---~~~~~~~h~~~v~~~~ 283 (410)
T 1vyh_C 211 SRDKTIKMWEVQTGYC--VKTFTGHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKE---CKAELREHRHVVECIS 283 (410)
T ss_dssp ETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEE
T ss_pred eCCCeEEEEECCCCcE--EEEEeCCCccEEEEEECCC--CCEEEEEcCCCeEEEEECCCCc---eeeEecCCCceEEEEE
Confidence 9999999999998864 3456789999999999998 7799999999999999975432 3445678999999999
Q ss_pred eCCCCCCCccccccC---CCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762 167 WGPGIGSLSELDLKG---SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 243 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~---~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s 243 (318)
|+|+........... ......+.+|++|+.|++|+|||+.++.+ ...+.+|..+|++++|+|+ +.+|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~--~~~~~~h~~~v~~v~~~~~----g~~l~s~s 357 (410)
T 1vyh_C 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSG----GKFILSCA 357 (410)
T ss_dssp ECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSS----SSCEEEEE
T ss_pred EcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce--EEEEECCCCcEEEEEEcCC----CCEEEEEe
Confidence 999642211111000 01111246899999999999999988864 4567899999999999996 88999999
Q ss_pred CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
.|++|++||...... ...+..|...|.+++|+|++++|++++.|++|+||+.
T Consensus 358 ~D~~i~vwd~~~~~~--~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 358 DDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp TTTEEEEECCTTSCC--CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCCeEEEEECCCCce--EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 999999999976542 3556789999999999999999999999999999985
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2e-41 Score=300.60 Aligned_cols=261 Identities=21% Similarity=0.316 Sum_probs=209.5
Q ss_pred eeecCCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762 6 NLVDTGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84 (318)
Q Consensus 6 ~~~~~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la 84 (318)
...+.||.+.|++++|+|++ ++|+|||.|++|++|++... ....+..+.++++|...|++++|++ ++.+|+
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~------~~~~~~~~~~~~~h~~~v~~~~~s~--dg~~l~ 81 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGD------DQKFGVPVRSFKGHSHIVQDCTLTA--DGAYAL 81 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEE------TTEEEEEEEEEECCSSCEEEEEECT--TSSEEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCC------CccccccceEEeCCcccEEEEEECC--CCCEEE
Confidence 34568999999999999965 89999999999999998521 0112456788999999999999974 589999
Q ss_pred EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA 164 (318)
Q Consensus 85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~ 164 (318)
||+.|++|+|||+.+++. ...+.+|...|.+++|+|+ +.++++|+.|++|++|++.. .....+.+|...+..
T Consensus 82 s~s~D~~v~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h~~~v~~ 153 (319)
T 3frx_A 82 SASWDKTLRLWDVATGET--YQRFVGHKSDVMSVDIDKK--ASMIISGSRDKTIKVWTIKG----QCLATLLGHNDWVSQ 153 (319)
T ss_dssp EEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECTT--SCEEEEEETTSCEEEEETTS----CEEEEECCCSSCEEE
T ss_pred EEeCCCEEEEEECCCCCe--eEEEccCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEECCC----CeEEEEeccCCcEEE
Confidence 999999999999998864 4456789999999999998 67899999999999999732 134566789999999
Q ss_pred eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762 165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244 (318)
Q Consensus 165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~ 244 (318)
+.|+|.... ...+..|++++.|++|++||+...+. ...+.+|...|++++|+|+ +.+|++++.
T Consensus 154 ~~~~~~~~~-----------~~~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~sp~----g~~l~s~~~ 216 (319)
T 3frx_A 154 VRVVPNEKA-----------DDDSVTIISAGNDKMVKAWNLNQFQI--EADFIGHNSNINTLTASPD----GTLIASAGK 216 (319)
T ss_dssp EEECCC-----------------CCEEEEEETTSCEEEEETTTTEE--EEEECCCCSCEEEEEECTT----SSEEEEEET
T ss_pred EEEccCCCC-----------CCCccEEEEEeCCCEEEEEECCcchh--heeecCCCCcEEEEEEcCC----CCEEEEEeC
Confidence 999985310 01135799999999999999987754 4567899999999999996 889999999
Q ss_pred CCeEEEEEcCCCcceee--------------------------------------EEe--------eecCCcEEEEEEcC
Q psy2762 245 DRKVIIWTSNDYVTWTP--------------------------------------FIM--------NTFDDVVWNVSWSL 278 (318)
Q Consensus 245 D~~i~vw~~~~~~~~~~--------------------------------------~~~--------~~~~~~v~~v~~sp 278 (318)
|++|+|||+........ ..+ ..+...|.+++|+|
T Consensus 217 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 296 (319)
T 3frx_A 217 DGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSA 296 (319)
T ss_dssp TCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECT
T ss_pred CCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECC
Confidence 99999999876421000 000 01234688899999
Q ss_pred CCCEEEEEeCCCeEEEEEECC
Q psy2762 279 TGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 279 dg~~l~s~~~D~~v~iW~~~~ 299 (318)
||++|++++.|++|+||++.+
T Consensus 297 dg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 297 DGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp TSSEEEEEETTSCEEEEEEEE
T ss_pred CCCEEEEeecCceEEEEEEee
Confidence 999999999999999999765
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.9e-41 Score=303.96 Aligned_cols=260 Identities=15% Similarity=0.195 Sum_probs=211.1
Q ss_pred eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCC-----------------------------------
Q psy2762 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDS----------------------------------- 51 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~----------------------------------- 51 (318)
+.+.||.+.|++++|+|++++|+|||.|++|+|||..........
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~ 137 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF 137 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence 456799999999999999999999999999999997532110000
Q ss_pred --CCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEE
Q psy2762 52 --HSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129 (318)
Q Consensus 52 --~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~l 129 (318)
..........+.+|.+.|.+++|++ ++..|++++.|++|++||+.+++. ...+.+|...|.+++|+|...+.++
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~t~s~D~~v~lwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTN--SDMQILTASGDGTCALWDVESGQL--LQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECS--SSSEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECCCSSCCEE
T ss_pred cccccccccceeeeccCCcEEEEEEeC--CCCEEEEEeCCCcEEEEeCCCCeE--EEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 0000012345667999999999964 478999999999999999998874 4456789999999999997556799
Q ss_pred EEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe
Q psy2762 130 ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK 209 (318)
Q Consensus 130 asgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~ 209 (318)
++|+.|++|++||+.... ....+.+|...|.+++|+|+ +.+|++|+.|++|+|||+..+.
T Consensus 214 ~sgs~Dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~p~-----------------~~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQ---CVQAFETHESDVNSVRYYPS-----------------GDAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp EEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTT-----------------SSEEEEEETTSCEEEEETTTTE
T ss_pred EEEeCCCeEEEEECCCCc---EEEEecCCCCCeEEEEEeCC-----------------CCEEEEEeCCCeEEEEECCCCc
Confidence 999999999999985443 34556789999999999997 4689999999999999998775
Q ss_pred EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC
Q psy2762 210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 289 (318)
Q Consensus 210 ~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D 289 (318)
.........+...+.+++|+|+ +.+|++++.|++|+|||+.... ....+.+|...|.+++|+|||++|++++.|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~s~~----g~~l~~g~~d~~i~vwd~~~~~--~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 274 EVAIYSKESIIFGASSVDFSLS----GRLLFAGYNDYTINVWDVLKGS--RVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp EEEEECCTTCCSCEEEEEECTT----SSEEEEEETTSCEEEEETTTCS--EEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEEEcCCCcccceeEEEEeCC----CCEEEEEECCCcEEEEECCCCc--eEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 4433333344567899999996 8899999999999999987654 245567899999999999999999999999
Q ss_pred CeEEEEE
Q psy2762 290 NSVSLWK 296 (318)
Q Consensus 290 ~~v~iW~ 296 (318)
++|+||+
T Consensus 348 ~~v~vW~ 354 (354)
T 2pbi_B 348 HTLRVWA 354 (354)
T ss_dssp SEEEEEC
T ss_pred CCEEecC
Confidence 9999995
No 12
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-41 Score=305.07 Aligned_cols=290 Identities=46% Similarity=0.879 Sum_probs=230.3
Q ss_pred eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~ 86 (318)
.+..||.+.|++++|+|++++|++|+.||+|+|||+... .+..+..+.+|.+.|++++|+++.++.+|+++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 75 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE---------THKLIDTLTGHEGPVWRVDWAHPKFGTILASC 75 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT---------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC---------cceeeeEecCCCCcEEEEEeCCCCCCCEEEEe
Confidence 345699999999999999999999999999999999632 45677889999999999999765458999999
Q ss_pred ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762 87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS 166 (318)
Q Consensus 87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~ 166 (318)
+.||+|++||+.+++......+..|...|.+++|+|+..+.++++++.|+.|++|++..... .....+..|..++.+++
T Consensus 76 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 76 SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-CCEEEEECCTTCEEEEE
T ss_pred ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-eeeEEecCCCCceEEEE
Confidence 99999999999988755666777899999999999974356899999999999999865432 22345568999999999
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~ 244 (318)
|+|....... . ......+.+|++++.|+.|++||+..+. ......+.+|...|++++|+|+.. .+.+|++++.
T Consensus 155 ~~~~~~~~~~---~-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~~~~l~s~~~ 229 (379)
T 3jrp_A 155 WAPATIEEDG---E-HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL-LRSYLASVSQ 229 (379)
T ss_dssp ECCCC--------------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS-SSEEEEEEET
T ss_pred EcCccccccc---c-ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC-CCCeEEEEeC
Confidence 9994110000 0 0000014689999999999999987653 334567789999999999999510 0689999999
Q ss_pred CCeEEEEEcCCCcce-eeEEe--eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762 245 DRKVIIWTSNDYVTW-TPFIM--NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 311 (318)
Q Consensus 245 D~~i~vw~~~~~~~~-~~~~~--~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~ 311 (318)
|+.|+||++...... ..... ..+...|.+++|+|+|++|++++.||.|+||+++.++.|.++.++..
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEEEEC-
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccccccceec
Confidence 999999998875311 11122 23678999999999999999999999999999999999998877654
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6e-41 Score=300.00 Aligned_cols=253 Identities=17% Similarity=0.205 Sum_probs=212.5
Q ss_pred eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~ 86 (318)
..+.||.+.|++++|+|++++|+||+.||+|+|||+. .+..+..+..|...|.+++|++ ++++|++|
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~-----------~~~~~~~~~~~~~~v~~~~~s~--~~~~l~s~ 115 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSY-----------TTNKVHAIPLRSSWVMTCAYAP--SGNYVACG 115 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT-----------TCCEEEEEECSSSCEEEEEECT--TSSEEEEE
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC-----------CCCcceEeecCCccEEEEEECC--CCCEEEEE
Confidence 3567999999999999999999999999999999986 3456788899999999999974 58999999
Q ss_pred ECCCeEEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762 87 SYDRKVIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA 164 (318)
Q Consensus 87 s~Dg~v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~ 164 (318)
+.|+.|++|++.+.. ......+.+|...|.++.|+|+ + .+++++.|++|++||+.... ....+.+|...|.+
T Consensus 116 ~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~ 189 (340)
T 1got_B 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD--N-QIVTSSGDTTCALWDIETGQ---QTTTFTGHTGDVMS 189 (340)
T ss_dssp ETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET--T-EEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEE
T ss_pred eCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC--C-cEEEEECCCcEEEEECCCCc---EEEEEcCCCCceEE
Confidence 999999999987642 2344457789999999999987 4 48899999999999975432 34456689999999
Q ss_pred eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762 165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244 (318)
Q Consensus 165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~ 244 (318)
++|+|+ +.+|++|+.|++|++||+.++.. ...+.+|...|++++|+|+ +.+|++++.
T Consensus 190 ~~~~~~-----------------~~~l~sg~~d~~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~p~----~~~l~s~s~ 246 (340)
T 1got_B 190 LSLAPD-----------------TRLFVSGACDASAKLWDVREGMC--RQTFTGHESDINAICFFPN----GNAFATGSD 246 (340)
T ss_dssp EEECTT-----------------SSEEEEEETTSCEEEEETTTCSE--EEEECCCSSCEEEEEECTT----SSEEEEEET
T ss_pred EEECCC-----------------CCEEEEEeCCCcEEEEECCCCee--EEEEcCCcCCEEEEEEcCC----CCEEEEEcC
Confidence 999997 46899999999999999988754 4567899999999999996 789999999
Q ss_pred CCeEEEEEcCCCcceeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762 245 DRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 303 (318)
Q Consensus 245 D~~i~vw~~~~~~~~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~ 303 (318)
|++|++||+..... ..... .+...|.+++|+|+|++|++++.|+.|++||.......
T Consensus 247 d~~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 247 DATCRLFDLRADQE--LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp TSCEEEEETTTTEE--EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCcEEEEECCCCcE--EEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence 99999999976432 11111 22347999999999999999999999999997765433
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-40 Score=296.26 Aligned_cols=263 Identities=24% Similarity=0.415 Sum_probs=205.7
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-cc-cccCeEEEEecCCCCCcEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-KG-HSGPVWQVAWAHPQFGTLLAS 85 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~-h~~~V~~v~~~~~~~~~~las 85 (318)
.+.||++.|.+++|+|+ +|++|+.|++|+|||+... ....+..+ .+ |.+.|++++|++ ++++||+
T Consensus 9 ~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~---------~~~~~~~~~~~~h~~~v~~v~~sp--~~~~las 75 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYD---------DFTLIDVLDETAHKKAIRSVAWRP--HTSLLAA 75 (330)
T ss_dssp EEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSS---------CCEEEEEECTTCCCSCEEEEEECT--TSSEEEE
T ss_pred eeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCC---------CeEEEEEEecCCccCCEEEEEECC--CCCEEEE
Confidence 45699999999999988 9999999999999998632 22455566 44 999999999974 5899999
Q ss_pred EECCCeEEEEeCCCC-----cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc-ceeeecccc
Q psy2762 86 CSYDRKVIIWRGDNG-----NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW-ESRKIAAHT 159 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~~-----~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~-~~~~~~~h~ 159 (318)
|+.|++|+|||+... .......+.+|...|.+++|+|+ +.+|++|+.|++|++||+....... ....+.+|.
T Consensus 76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 76 GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp EETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT--SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred EeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC--CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC
Confidence 999999999998532 11244567789999999999998 7799999999999999984332222 234556899
Q ss_pred cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762 160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239 (318)
Q Consensus 160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l 239 (318)
..|.+++|+|+ +.+|++|+.|++|+|||...+.......+.+|...|.+++|+|+. .+.+|
T Consensus 154 ~~v~~v~~~p~-----------------~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~~l 214 (330)
T 2hes_X 154 QDVKHVIWHPS-----------------EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE--GVFRL 214 (330)
T ss_dssp SCEEEEEECSS-----------------SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSS--SSCEE
T ss_pred CceEEEEECCC-----------------CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCC--CeeEE
Confidence 99999999997 468999999999999998876555567789999999999999962 25689
Q ss_pred EEEeCCCeEEEEEcCCCcc-----e-eeEEeee-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 240 ASCSQDRKVIIWTSNDYVT-----W-TPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 240 ~s~s~D~~i~vw~~~~~~~-----~-~~~~~~~-~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
++++.|++|+||++..... + ....+.. |...|.+++|+|++ +|++++.||+|+||+... ++|++.
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~-~~~~~~ 286 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD-GEWKVF 286 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET-TEEEEE
T ss_pred EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC-CceEEE
Confidence 9999999999999864310 0 1122333 78899999999776 889999999999999764 455443
No 15
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-40 Score=294.45 Aligned_cols=286 Identities=29% Similarity=0.567 Sum_probs=227.6
Q ss_pred ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762 5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84 (318)
Q Consensus 5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la 84 (318)
+..+..||++.|++++|+|++++|++|+.||+|+|||+... ......+..+.+|.+.|++++|++..++.+|+
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~ 75 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKD-------TSNWELSDSWRAHDSSIVAIDWASPEYGRIIA 75 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSS-------SCCEEEEEEEECCSSCEEEEEECCGGGCSEEE
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCC-------CCcceecceeccCCCcEEEEEEcCCCCCCEEE
Confidence 34567899999999999999999999999999999999732 11225678889999999999997432589999
Q ss_pred EEECCCeEEEEeCCCCc-------EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee----
Q psy2762 85 SCSYDRKVIIWRGDNGN-------WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR---- 153 (318)
Q Consensus 85 s~s~Dg~v~vWd~~~~~-------~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~---- 153 (318)
+++.|++|++||+..+. ......+..|...|.+++|+|+..+.++++++.|+.|++||+..........
T Consensus 76 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 155 (351)
T 3f3f_A 76 SASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE 155 (351)
T ss_dssp EEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE
T ss_pred EEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc
Confidence 99999999999987652 1345567789999999999997435689999999999999986554211110
Q ss_pred ------eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEE
Q psy2762 154 ------KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVA 227 (318)
Q Consensus 154 ------~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~ 227 (318)
....|...+.++.|+|+.. .+.+|++++.|+.+.+|+...++......+.+|...|++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~p~~~--------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 221 (351)
T 3f3f_A 156 MKVLSIPPANHLQSDFCLSWCPSRF--------------SPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSIS 221 (351)
T ss_dssp EESCSCCCSSCSCCCEEEEECCCSS--------------SCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEE
T ss_pred ccccccccCCcccceeEEEeccCCC--------------CCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEE
Confidence 0114667788999998521 13689999999999888877776656778889999999999
Q ss_pred EccCCCCCccEEEEEeCCCeEEEEEcCCCcc--------------------------------------------eeeEE
Q psy2762 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVT--------------------------------------------WTPFI 263 (318)
Q Consensus 228 ~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~--------------------------------------------~~~~~ 263 (318)
|+|++.....+|++++.|+.|++||+..... .....
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE 301 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence 9997211127999999999999999875310 11233
Q ss_pred eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762 264 MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 311 (318)
Q Consensus 264 ~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~ 311 (318)
+..|...|.+++|+|+|++|++++.||.|+||+++.+++|+++..+..
T Consensus 302 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 349 (351)
T 3f3f_A 302 HDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVITA 349 (351)
T ss_dssp ECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEEEC-
T ss_pred EecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheeehcc
Confidence 456788999999999999999999999999999999999999988753
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-40 Score=297.18 Aligned_cols=248 Identities=16% Similarity=0.249 Sum_probs=210.2
Q ss_pred cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
..+|...|.+++|+|+|++|++|+.|++|+|||+.... ........+.+|.+.|.++.|.+ +..|++++.
T Consensus 93 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~-------~~~~~~~~~~~h~~~v~~~~~~~---~~~l~s~s~ 162 (340)
T 1got_B 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE-------GNVRVSRELAGHTGYLSCCRFLD---DNQIVTSSG 162 (340)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS-------BSCEEEEEEECCSSCEEEEEEEE---TTEEEEEET
T ss_pred eecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC-------CcceeEEEecCCCccEEEEEECC---CCcEEEEEC
Confidence 35799999999999999999999999999999986320 12245678899999999999963 346999999
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG 168 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 168 (318)
|++|++||+.++.. ...+.+|...|.+++|+|+ +.++++|+.|++|++||+.... ....+.+|...|.+++|+
T Consensus 163 d~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~--~~~l~sg~~d~~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~ 235 (340)
T 1got_B 163 DTTCALWDIETGQQ--TTTFTGHTGDVMSLSLAPD--TRLFVSGACDASAKLWDVREGM---CRQTFTGHESDINAICFF 235 (340)
T ss_dssp TSCEEEEETTTTEE--EEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCS---EEEEECCCSSCEEEEEEC
T ss_pred CCcEEEEECCCCcE--EEEEcCCCCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCe---eEEEEcCCcCCEEEEEEc
Confidence 99999999988763 4467789999999999998 6789999999999999975432 345567899999999999
Q ss_pred CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248 (318)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i 248 (318)
|+ +.+|++|+.|++|+|||+..++.........+...|++++|+|+ +.+|++++.|++|
T Consensus 236 p~-----------------~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~----g~~l~~g~~d~~i 294 (340)
T 1got_B 236 PN-----------------GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS----GRLLLAGYDDFNC 294 (340)
T ss_dssp TT-----------------SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT----SSEEEEEETTSEE
T ss_pred CC-----------------CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC----CCEEEEECCCCeE
Confidence 97 47899999999999999988765443333445567999999996 8899999999999
Q ss_pred EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296 (318)
Q Consensus 249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~ 296 (318)
++||..... ....+.+|..+|.+++|+|||++|+|++.|++|+|||
T Consensus 295 ~vwd~~~~~--~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 295 NVWDALKAD--RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTTCC--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEcccCc--EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999987654 3456778999999999999999999999999999996
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-40 Score=294.32 Aligned_cols=260 Identities=26% Similarity=0.371 Sum_probs=197.4
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg 90 (318)
+|.+.|++++|+|++++|++|+.|++|+|||+.... ........+..+.+|.+.|++++|++ ++++||||+.|+
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~----~~~~~~~~~~~~~~h~~~V~~v~~sp--~g~~las~s~D~ 129 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESA----DRTFEMDLLAIIEGHENEVKGVAWSN--DGYYLATCSRDK 129 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-----------CCCEEEEEEC----CEEEEEECT--TSCEEEEEETTS
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCc----CccccceeEEEEcCCCCcEEEEEECC--CCCEEEEEeCCC
Confidence 499999999999999999999999999999985210 00012356788999999999999974 589999999999
Q ss_pred eEEEEeCCCC--cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762 91 KVIIWRGDNG--NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG 168 (318)
Q Consensus 91 ~v~vWd~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 168 (318)
+|++||+... .......+.+|...|.+++|+|+ +.+|++++.|++|++|+...... .....+.+|...|.+++|+
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~s~s~D~~i~iW~~~~~~~-~~~~~~~~h~~~v~~~~~~ 206 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS--EALLASSSYDDTVRIWKDYDDDW-ECVAVLNGHEGTVWSSDFD 206 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEEC
T ss_pred EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCC--CCEEEEEcCCCeEEEEECCCCCe-eEEEEccCCCCcEEEEEec
Confidence 9999998432 22345567889999999999998 67899999999999999754321 1244566899999999999
Q ss_pred CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC------eEEEEEEccc-CCCCeeEEEEccCCCCCccEEEE
Q psy2762 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD------KWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIAS 241 (318)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~------~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s 241 (318)
|+.. +.+|++|+.|++|+|||+..+ ++.....+.+ |...|++++|+|+ .+|++
T Consensus 207 ~~~~---------------~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-----~~l~s 266 (330)
T 2hes_X 207 KTEG---------------VFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-----GLIAS 266 (330)
T ss_dssp CSSS---------------SCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT-----SCEEE
T ss_pred CCCC---------------eeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCC-----CEEEE
Confidence 9621 357999999999999997643 1123344555 9999999999974 47999
Q ss_pred EeCCCeEEEEEcCCCcceee-EEeeecCC-cEEEEEEcC--CCCEEEEEeCCCeEEEEEECC
Q psy2762 242 CSQDRKVIIWTSNDYVTWTP-FIMNTFDD-VVWNVSWSL--TGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 242 ~s~D~~i~vw~~~~~~~~~~-~~~~~~~~-~v~~v~~sp--dg~~l~s~~~D~~v~iW~~~~ 299 (318)
++.|++|+||+......... .....|.. .|..++|+| ++++||+++.||+|+||+++.
T Consensus 267 ~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 267 VGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99999999999865321111 12245666 899999999 799999999999999999653
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.1e-41 Score=302.74 Aligned_cols=258 Identities=19% Similarity=0.161 Sum_probs=200.7
Q ss_pred cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
..+|...|++++|+|++.+| +++.||+|+|||+..... .........+|.+.|++++|++ ++++|++|+.
T Consensus 90 ~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~-------~~~~~~~~~~h~~~V~~v~~sp--dg~~l~sgs~ 159 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKES-------LLVNKFAKYEHDDIVKTLSVFS--DGTQAVSGGK 159 (357)
T ss_dssp EEECSSCEEEEEEETTTEEE-EEETTSCEEEC---------------CCCCEEECCCSSCEEEEEECS--SSSEEEEEET
T ss_pred cCCCCCCEEEEEEcCCCCEE-EEECCCEEEEeeccccce-------eEEEeeccCCCCCCEEEEEECC--CCCEEEEEeC
Confidence 34789999999999998655 578899999999863200 0011234568999999999974 5899999999
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG 168 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 168 (318)
|++|++||+.+++ ....+.+|...|++++|+|+. ..++++++.|++|++||+...... .......|...+.+++|+
T Consensus 160 dg~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~~-~~~~~s~~~dg~v~~wd~~~~~~~-~~~~~~~~~~~v~~v~~s 235 (357)
T 4g56_B 160 DFSVKVWDLSQKA--VLKSYNAHSSEVNCVAACPGK-DTIFLSCGEDGRILLWDTRKPKPA-TRIDFCASDTIPTSVTWH 235 (357)
T ss_dssp TSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTC-SSCEEEEETTSCEEECCTTSSSCB-CBCCCTTCCSCEEEEEEC
T ss_pred CCeEEEEECCCCc--EEEEEcCCCCCEEEEEEccCC-CceeeeeccCCceEEEECCCCcee-eeeeeccccccccchhhh
Confidence 9999999998876 444677899999999999985 357889999999999997554321 112233566778999999
Q ss_pred CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248 (318)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i 248 (318)
|+. +.+||+|+.|+.|+|||+.+++. ...+.+|...|++|+|+|+ ++.+|++++.|++|
T Consensus 236 p~~----------------~~~la~g~~d~~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~---~~~~lasgs~D~~i 294 (357)
T 4g56_B 236 PEK----------------DDTFACGDETGNVSLVNIKNPDS--AQTSAVHSQNITGLAYSYH---SSPFLASISEDCTV 294 (357)
T ss_dssp TTS----------------TTEEEEEESSSCEEEEESSCGGG--CEEECCCSSCEEEEEECSS---SSCCEEEEETTSCE
T ss_pred hcc----------------cceEEEeecccceeEEECCCCcE--eEEEeccceeEEEEEEcCC---CCCEEEEEeCCCEE
Confidence 963 36799999999999999987753 4567899999999999997 35689999999999
Q ss_pred EEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKENTDGAWQ 304 (318)
Q Consensus 249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW~~~~~~~~~ 304 (318)
+|||+.... .....+|.+.|.+|+|+| |+++|+|++.|++|++|++...++-.
T Consensus 295 ~iwd~~~~~---~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~ 348 (357)
T 4g56_B 295 AVLDADFSE---VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTE 348 (357)
T ss_dssp EEECTTSCE---EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC------
T ss_pred EEEECCCCc---EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc
Confidence 999987643 333457899999999999 89999999999999999987766544
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.3e-40 Score=300.69 Aligned_cols=266 Identities=17% Similarity=0.244 Sum_probs=204.2
Q ss_pred eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCC-----CC------CCCcc-------------------
Q psy2762 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKD-----DS------HSQKG------------------- 56 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~-----~~------~~~~~------------------- 56 (318)
+.+.||.+.|++++|+|++++|+|||.|++|+|||+....... .. -...+
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~ 139 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSS 139 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCC
Confidence 3568999999999999999999999999999999986321100 00 00000
Q ss_pred --------eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEe---cCCCcCeEEEEeeCCCC
Q psy2762 57 --------TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY---NNHDSSVNSIAWAPKEF 125 (318)
Q Consensus 57 --------~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~ 125 (318)
.....+.+|.+.|.++.|.+ ..+.+|+||+.|++|++||+.++.....+.. .+|...|.+++|+|.+
T Consensus 140 ~~~~~~~~~~~~~~~gh~~~v~~~~~~~-~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~- 217 (380)
T 3iz6_a 140 QADRDGNMPVSRVLTGHKGYASSCQYVP-DQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN- 217 (380)
T ss_dssp CSSCCCSSTTCCBCCCCSSCCCCCBCCS-SSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS-
T ss_pred CccccCCccceeeccCCCcceEEEEEec-CCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC-
Confidence 01223567777777777753 3466799999999999999988765443321 4688999999998843
Q ss_pred CcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEc
Q psy2762 126 GLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ 205 (318)
Q Consensus 126 ~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~ 205 (318)
+.++++|+.|++|++||+.... .....+.+|...|.+++|+|+ +.+|++|+.|++|+|||+
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v~~~p~-----------------~~~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDINSVKFFPD-----------------GQRFGTGSDDGTCRLFDM 278 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCCCEEEECTT-----------------SSEEEEECSSSCEEEEET
T ss_pred CCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCeEEEEEecC-----------------CCeEEEEcCCCeEEEEEC
Confidence 6789999999999999985332 134556789999999999997 478999999999999999
Q ss_pred cCCeEEEEEEc-----ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe----eecCCcEEEEEE
Q psy2762 206 EGDKWIEETKL-----ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM----NTFDDVVWNVSW 276 (318)
Q Consensus 206 ~~~~~~~~~~~-----~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~----~~~~~~v~~v~~ 276 (318)
.+++....... ..+...|++++|+|+ +.+|++++.|+.|++||...... ...+ .+|.+.|.+++|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----g~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~~~~h~~~v~~l~~ 352 (380)
T 3iz6_a 279 RTGHQLQVYNREPDRNDNELPIVTSVAFSIS----GRLLFAGYSNGDCYVWDTLLAEM--VLNLGTLQNSHEGRISCLGL 352 (380)
T ss_dssp TTTEEEEEECCCCSSSCCSSCSCSEEEECSS----SSEEEEECTTSCEEEEETTTCCE--EEEECCSCSSCCCCCCEEEE
T ss_pred CCCcEEEEecccccccccccCceEEEEECCC----CCEEEEEECCCCEEEEECCCCce--EEEEecccCCCCCceEEEEE
Confidence 98865433221 122335899999996 88999999999999999876432 2222 468899999999
Q ss_pred cCCCCEEEEEeCCCeEEEEEECC
Q psy2762 277 SLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 277 spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
+|||++|+||+.|++|+||++..
T Consensus 353 s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 353 SSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCCCEEEEeeCCCCEEEEecCC
Confidence 99999999999999999999754
No 20
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.8e-39 Score=288.17 Aligned_cols=260 Identities=19% Similarity=0.277 Sum_probs=203.5
Q ss_pred eeecCCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762 6 NLVDTGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84 (318)
Q Consensus 6 ~~~~~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la 84 (318)
...+.||++.|++++|+|+ +++|+|||.|++|+|||+... ....+....++++|.+.|.++.|++ ++++|+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~------~~~~~~~~~~l~~h~~~V~~~~~s~--dg~~l~ 102 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRD------ETNYGIPQRALRGHSHFVSDVVISS--DGQFAL 102 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCS------SSCSEEEEEEECCCSSCEEEEEECT--TSSEEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC------CcccceeeEEEeCCCCCEEEEEECC--CCCEEE
Confidence 3357899999999999997 689999999999999998632 1123456788999999999999974 588888
Q ss_pred EEECCCeEEEEeCCCCc-----------------------------------------EEEEEEecCCCcCeEEEEeeCC
Q psy2762 85 SCSYDRKVIIWRGDNGN-----------------------------------------WFKYYEYNNHDSSVNSIAWAPK 123 (318)
Q Consensus 85 s~s~Dg~v~vWd~~~~~-----------------------------------------~~~~~~~~~h~~~v~~v~~~p~ 123 (318)
+++.|+.|++|+..... ........+|...+.+++|+++
T Consensus 103 s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred EEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 88888888888764211 1122234567888999999998
Q ss_pred CCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEE
Q psy2762 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW 203 (318)
Q Consensus 124 ~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw 203 (318)
....++++++.|+.|++|+..... ....+.+|..+|.+++|+|+ +.+|++|+.|++|+||
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~---~~~~~~~h~~~v~~~~~s~~-----------------~~~l~s~s~Dg~i~iw 242 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCK---LKTNHIGHTGYLNTVTVSPD-----------------GSLCASGGKDGQAMLW 242 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTT-----------------SSEEEEEETTCEEEEE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCc---eeeEecCCCCcEEEEEECCC-----------------CCEEEEEeCCCeEEEE
Confidence 767789999999999999974432 34456689999999999997 4789999999999999
Q ss_pred EccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCccee-------eEEeeecCCcEEEEEE
Q psy2762 204 KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT-------PFIMNTFDDVVWNVSW 276 (318)
Q Consensus 204 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~-------~~~~~~~~~~v~~v~~ 276 (318)
|+.+.+.. ..+. +...|.+++|+|+ + ++++++.|+.|+|||+....... ......|...|.+++|
T Consensus 243 d~~~~~~~--~~~~-~~~~v~~~~~~~~----~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 314 (340)
T 4aow_A 243 DLNEGKHL--YTLD-GGDIINALCFSPN----R-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 314 (340)
T ss_dssp ETTTTEEE--EEEE-CSSCEEEEEECSS----S-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEE
T ss_pred EeccCcee--eeec-CCceEEeeecCCC----C-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEE
Confidence 99887643 3344 4467999999995 3 56778889999999987643110 1122356789999999
Q ss_pred cCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 277 SLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 277 spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
+|||++|++|+.||+|+|||+.+|.
T Consensus 315 s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 315 SADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 9999999999999999999998864
No 21
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.4e-41 Score=299.93 Aligned_cols=260 Identities=16% Similarity=0.156 Sum_probs=200.5
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCc-CCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNL-KKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
..|+..|.+++|+|||++|++++ |+++|+||..... .........+. ......|...|++++|++ ...|++|+.
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~---d~~l~~~s~ 101 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGF-CSAGVQTEAGVADLTWVG---ERGILVASD 101 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGG-CSEEEEESSCEEEEEEET---TTEEEEEET
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcce-eeeeeccCCCEEEEEEeC---CCeEEEEEC
Confidence 46788999999999999999888 8899999742100 00000000111 122234678899999974 357899999
Q ss_pred CCeEEEEeCCCCcEEE--EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762 89 DRKVIIWRGDNGNWFK--YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS 166 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~ 166 (318)
||+|+|||+.+++... ...+.+|...|++|+|+|+ +.+|++|+.|++|++||+..+. .+..+.+|...|.+++
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd--g~~l~sgs~d~~i~iwd~~~~~---~~~~~~~h~~~V~~~~ 176 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS--GTQAVSGSKDICIKVWDLAQQV---VLSSYRAHAAQVTCVA 176 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEE
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEcCcCCceEEEE
Confidence 9999999998775432 3345689999999999998 7899999999999999975432 3456678999999999
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~ 246 (318)
|+|+. ...|++++.|++|+|||+++++.........|...+++++|+|+ ++.+|++|+.|+
T Consensus 177 ~~~~~----------------~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~l~sg~~dg 237 (344)
T 4gqb_B 177 ASPHK----------------DSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQ---QSEVFVFGDENG 237 (344)
T ss_dssp ECSSC----------------TTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSS---CTTEEEEEETTS
T ss_pred ecCCC----------------CCceeeeccccccccccccccceeeeeecceeeccceeeeecCC---CCcceEEeccCC
Confidence 99963 24789999999999999988765444444567778999999996 577899999999
Q ss_pred eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCC
Q psy2762 247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~ 300 (318)
+|+|||+.... ....+.+|...|.+++|+|+| ++||+++.|++|+|||.+.+
T Consensus 238 ~v~~wd~~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 238 TVSLVDTKSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp EEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred cEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 99999998754 245567899999999999998 57999999999999997664
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.7e-40 Score=314.99 Aligned_cols=271 Identities=21% Similarity=0.280 Sum_probs=207.2
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-------ccccCeEEEEecCCCCC
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-------GHSGPVWQVAWAHPQFG 80 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-------~h~~~V~~v~~~~~~~~ 80 (318)
...+|.+.|++++|+|+|++|+||+.|++|+|||+. .++.+..+. +|.+.|++++|++ ++
T Consensus 185 ~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~-----------~g~~~~~~~~~~~~~~~h~~~V~~v~~sp--dg 251 (611)
T 1nr0_A 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV-----------DGTKTGVFEDDSLKNVAHSGSVFGLTWSP--DG 251 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TCCEEEECBCTTSSSCSSSSCEEEEEECT--TS
T ss_pred eeccccCceEEEEECCCCCEEEEEECCCcEEEEECC-----------CCcEeeeeccccccccccCCCEEEEEECC--CC
Confidence 457999999999999999999999999999999986 245566674 7999999999974 58
Q ss_pred cEEEEEECCCeEEEEeCCCCcEEEE-----------------------------------------EEecCCCcCeEEEE
Q psy2762 81 TLLASCSYDRKVIIWRGDNGNWFKY-----------------------------------------YEYNNHDSSVNSIA 119 (318)
Q Consensus 81 ~~las~s~Dg~v~vWd~~~~~~~~~-----------------------------------------~~~~~h~~~v~~v~ 119 (318)
++|+|++.|++|+|||+.+++.... ..+.+|...|.+++
T Consensus 252 ~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~ 331 (611)
T 1nr0_A 252 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS 331 (611)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE
Confidence 9999999999999999987654322 23457999999999
Q ss_pred eeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccceeeeCCCCCCCc--------cccc-----------
Q psy2762 120 WAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLS--------ELDL----------- 179 (318)
Q Consensus 120 ~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~--------~~~~----------- 179 (318)
|+|+ +.++++++.|++|++||...... ...+ .+|...+..++|+|+..... ..+.
T Consensus 332 ~spd--g~~l~s~s~D~~v~~Wd~~~~~~---~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~ 406 (611)
T 1nr0_A 332 SSAD--GKTLFSADAEGHINSWDISTGIS---NRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV 406 (611)
T ss_dssp ECTT--SSEEEEEETTSCEEEEETTTCCE---EECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred EeCC--CCEEEEEeCCCcEEEEECCCCce---eeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence 9998 77999999999999999754321 1111 24555555555554310000 0000
Q ss_pred -----------------------------------------cC----CCCCCccceEEEecCCCeEEEEEccCCeEEEEE
Q psy2762 180 -----------------------------------------KG----SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET 214 (318)
Q Consensus 180 -----------------------------------------~~----~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~ 214 (318)
.. -.+...+++||+|+.|++|+|||+.+++.....
T Consensus 407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~ 486 (611)
T 1nr0_A 407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVK 486 (611)
T ss_dssp EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeee
Confidence 00 011223678999999999999999877544334
Q ss_pred EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE-EeeecCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy2762 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVS 293 (318)
Q Consensus 215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~-~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~ 293 (318)
. .+|...|++|+|+|+ +.+|++++.|++|++|++.+....... ....|...|++|+|+|||++||+++.|++|+
T Consensus 487 ~-~~h~~~v~~v~fspd----g~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~ 561 (611)
T 1nr0_A 487 T-IVHPAEITSVAFSNN----GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 561 (611)
T ss_dssp E-EECSSCEEEEEECTT----SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred c-cCCCCceEEEEECCC----CCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEE
Confidence 4 689999999999996 889999999999999998752211111 1234889999999999999999999999999
Q ss_pred EEEECCCC
Q psy2762 294 LWKENTDG 301 (318)
Q Consensus 294 iW~~~~~~ 301 (318)
||+++.+.
T Consensus 562 lW~~~~~~ 569 (611)
T 1nr0_A 562 VWNMNKPS 569 (611)
T ss_dssp EEETTCTT
T ss_pred EEECCCcc
Confidence 99987754
No 23
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.6e-39 Score=288.69 Aligned_cols=266 Identities=20% Similarity=0.311 Sum_probs=206.3
Q ss_pred ecCCCcceeeeeee-----cC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc
Q psy2762 8 VDTGHEDMIHDAEM-----DY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT 81 (318)
Q Consensus 8 ~~~gH~~~v~~~~~-----~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~ 81 (318)
.+.||.+.|++++| ++ ++++|+|||.|++|+|||+.... .....+.....+.+|.+.|++++|++ ++.
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~----~~~~~~~~~~~l~~h~~~V~~~~~~~--~~~ 89 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEE----QNGYFGIPHKALTGHNHFVSDLALSQ--ENC 89 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSC----CSSBSEEEEEEECCCSSCEEEEEECS--STT
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCC----cccccccccchhccCCCceEEEEECC--CCC
Confidence 56799999999999 76 99999999999999999986321 01113456788999999999999974 589
Q ss_pred EEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762 82 LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG 161 (318)
Q Consensus 82 ~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~ 161 (318)
+|+||+.|++|++||+.+++. ...+.+|...|.+++|+|+ +.++++++.|++|++||+.... .........|...
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~--~~~~~~h~~~v~~v~~sp~--~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTT--YKRFVGHQSEVYSVAFSPD--NRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDW 164 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCE--EEEEECCCSCEEEEEECSS--TTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSC
T ss_pred EEEEEcCCCcEEEEECCCCcE--EEEEcCCCCcEEEEEECCC--CCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCce
Confidence 999999999999999988764 3456789999999999998 6789999999999999974211 0011112368888
Q ss_pred cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762 162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241 (318)
Q Consensus 162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s 241 (318)
+.++.|+|+..... .....+.+|++++.|++|++||... + ....+.+|...|++++|+|+ +.+|++
T Consensus 165 v~~~~~~~~~~~~~-------~~~~~~~~l~s~~~d~~i~iwd~~~-~--~~~~~~~h~~~v~~~~~s~~----g~~l~s 230 (343)
T 2xzm_R 165 VSCVRYSPIMKSAN-------KVQPFAPYFASVGWDGRLKVWNTNF-Q--IRYTFKAHESNVNHLSISPN----GKYIAT 230 (343)
T ss_dssp EEEEEECCCCCSCS-------CCCSSCCEEEEEETTSEEEEEETTT-E--EEEEEECCSSCEEEEEECTT----SSEEEE
T ss_pred eeeeeecccccccc-------ccCCCCCEEEEEcCCCEEEEEcCCC-c--eeEEEcCccccceEEEECCC----CCEEEE
Confidence 99999999642111 0111135899999999999999543 2 34567899999999999996 889999
Q ss_pred EeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
++.|++|+|||+..... +.....+...|.+++|+|++++|++ +.|+.|+||++....
T Consensus 231 gs~dg~v~iwd~~~~~~--~~~~~~~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTY--PQREFDAGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQS 287 (343)
T ss_dssp EETTCEEEEEESSCCSS--CSEEEECSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCC
T ss_pred EcCCCeEEEEECCCCcc--cceeecCCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCC
Confidence 99999999999854321 1122234567999999999998864 558899999986643
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-40 Score=300.72 Aligned_cols=255 Identities=17% Similarity=0.184 Sum_probs=200.0
Q ss_pred CCCcceeeeeeecCCCCEEEEeeC------CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSS------DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL 83 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l 83 (318)
.+|+..|++++|+|||++|+|||. |++|++|+..... ..........+|.+.|++++|+++ + .+
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~-------~~~~~~~~~~~~~~~V~~~~~s~d--~-~~ 108 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGA-------PNESLCTAGVQTEAGVTDVAWVSE--K-GI 108 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC----------CGGGCSEEEECSSCEEEEEEETT--T-EE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCC-------cceeEecccCCCCCCEEEEEEcCC--C-CE
Confidence 469999999999999999999997 7789999875321 011223345579999999999743 4 56
Q ss_pred EEEECCCeEEEEeCCCCcEEE--EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762 84 ASCSYDRKVIIWRGDNGNWFK--YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG 161 (318)
Q Consensus 84 as~s~Dg~v~vWd~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~ 161 (318)
++++.||+|+|||+.+++... .....+|...|.+|+|+|+ +.+|++|+.|++|++||..... ....+.+|...
T Consensus 109 l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~sgs~dg~v~iwd~~~~~---~~~~~~~h~~~ 183 (357)
T 4g56_B 109 LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD--GTQAVSGGKDFSVKVWDLSQKA---VLKSYNAHSSE 183 (357)
T ss_dssp EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSC
T ss_pred EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEcCCCCC
Confidence 678999999999998765332 2334579999999999998 7789999999999999974432 34556789999
Q ss_pred cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762 162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241 (318)
Q Consensus 162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s 241 (318)
+.+++|+|+. ...|++++.|++|+|||+++++......+..|...|++|+|+|+ .+.+|++
T Consensus 184 v~~v~~s~~~----------------~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~---~~~~la~ 244 (357)
T 4g56_B 184 VNCVAACPGK----------------DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE---KDDTFAC 244 (357)
T ss_dssp EEEEEECTTC----------------SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT---STTEEEE
T ss_pred EEEEEEccCC----------------CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhc---ccceEEE
Confidence 9999999863 24689999999999999988765444455678888999999997 4678999
Q ss_pred EeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCC
Q psy2762 242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~ 300 (318)
++.|+.|++||+..... ...+..|...|.+++|+|++ ++||+++.|++|+|||++.+
T Consensus 245 g~~d~~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 245 GDETGNVSLVNIKNPDS--AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp EESSSCEEEEESSCGGG--CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred eecccceeEEECCCCcE--eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 99999999999987542 34567788999999999997 67999999999999998765
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-39 Score=313.52 Aligned_cols=252 Identities=19% Similarity=0.289 Sum_probs=207.9
Q ss_pred eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~ 86 (318)
..+.||.+.|++++|+|+|++||||+.|++|+|||+... ......++.+|.+.|++++|++ ++++|+++
T Consensus 53 ~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~---------~~~~~~~~~~~~~~v~~v~fs~--dg~~l~~~ 121 (611)
T 1nr0_A 53 EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT---------THILKTTIPVFSGPVKDISWDS--ESKRIAAV 121 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST---------TCCEEEEEECSSSCEEEEEECT--TSCEEEEE
T ss_pred eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCC---------cceeeEeecccCCceEEEEECC--CCCEEEEE
Confidence 456799999999999999999999999999999998522 2345668899999999999974 58999999
Q ss_pred ECC----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762 87 SYD----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC 162 (318)
Q Consensus 87 s~D----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v 162 (318)
+.+ ++|++||... ....+.+|...|++++|+|+. ..++++|+.|++|++|+.... .....+.+|...|
T Consensus 122 ~~~~~~~~~v~~wd~~~----~~~~l~gh~~~v~~v~f~p~~-~~~l~s~s~D~~v~lwd~~~~---~~~~~l~~H~~~V 193 (611)
T 1nr0_A 122 GEGRERFGHVFLFDTGT----SNGNLTGQARAMNSVDFKPSR-PFRIISGSDDNTVAIFEGPPF---KFKSTFGEHTKFV 193 (611)
T ss_dssp ECCSSCSEEEEETTTCC----BCBCCCCCSSCEEEEEECSSS-SCEEEEEETTSCEEEEETTTB---EEEEEECCCSSCE
T ss_pred ECCCCceeEEEEeeCCC----CcceecCCCCCceEEEECCCC-CeEEEEEeCCCeEEEEECCCC---eEeeeeccccCce
Confidence 876 4899998532 223567899999999999984 246999999999999985322 1234566899999
Q ss_pred ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc-------cCCCCeeEEEEccCCCCC
Q psy2762 163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE-------NHSDWVRDVAWAPSWGLS 235 (318)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~-------~h~~~V~~v~~sp~~~~~ 235 (318)
.+++|+|+ +.+||+|+.|++|+|||..+++.. ..+. +|...|++++|+|+
T Consensus 194 ~~v~fspd-----------------g~~las~s~D~~i~lwd~~~g~~~--~~~~~~~~~~~~h~~~V~~v~~spd---- 250 (611)
T 1nr0_A 194 HSVRYNPD-----------------GSLFASTGGDGTIVLYNGVDGTKT--GVFEDDSLKNVAHSGSVFGLTWSPD---- 250 (611)
T ss_dssp EEEEECTT-----------------SSEEEEEETTSCEEEEETTTCCEE--EECBCTTSSSCSSSSCEEEEEECTT----
T ss_pred EEEEECCC-----------------CCEEEEEECCCcEEEEECCCCcEe--eeeccccccccccCCCEEEEEECCC----
Confidence 99999997 578999999999999998877643 3342 79999999999996
Q ss_pred ccEEEEEeCCCeEEEEEcCCCcce-----------------------------------------eeEEeeecCCcEEEE
Q psy2762 236 KCMIASCSQDRKVIIWTSNDYVTW-----------------------------------------TPFIMNTFDDVVWNV 274 (318)
Q Consensus 236 ~~~l~s~s~D~~i~vw~~~~~~~~-----------------------------------------~~~~~~~~~~~v~~v 274 (318)
+.+|+|++.|++|+|||+.+.... ....+.+|...|.++
T Consensus 251 g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l 330 (611)
T 1nr0_A 251 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL 330 (611)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence 889999999999999998764211 012234688899999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 275 SWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 275 ~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
+|+|||++|++++.|++|++||+..+
T Consensus 331 ~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 331 SSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 99999999999999999999997654
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-38 Score=278.28 Aligned_cols=252 Identities=21% Similarity=0.383 Sum_probs=204.7
Q ss_pred ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762 5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84 (318)
Q Consensus 5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la 84 (318)
+.....||.+.|++++|+|+|++|++|+.|++|+||++. .++....+.+|...|.+++|++ ++++|+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~-----------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~ 81 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-----------DGKFEKTISGHKLGISDVAWSS--DSNLLV 81 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TCCEEEEECCCSSCEEEEEECT--TSSEEE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCC-----------CcccchhhccCCCceEEEEEcC--CCCEEE
Confidence 344567999999999999999999999999999999986 3456788999999999999974 589999
Q ss_pred EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA 164 (318)
Q Consensus 85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~ 164 (318)
+++.|++|++||+.+++. ...+.+|...|.+++|+|+ +.++++|+.|+.|++||+.... ....+..|..++..
T Consensus 82 s~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~ 154 (312)
T 4ery_A 82 SASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVKTGK---CLKTLPAHSDPVSA 154 (312)
T ss_dssp EEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEE
T ss_pred EECCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCE---EEEEecCCCCcEEE
Confidence 999999999999988764 3456789999999999998 6789999999999999985433 34556689999999
Q ss_pred eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762 165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244 (318)
Q Consensus 165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~ 244 (318)
+.|+|+ +.+|++++.|+.|++||+.+++.... ....+...+..++|+|+ +.+|++++.
T Consensus 155 ~~~~~~-----------------~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~l~~~~~ 212 (312)
T 4ery_A 155 VHFNRD-----------------GSLIVSSSYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVKFSPN----GKYILAATL 212 (312)
T ss_dssp EEECTT-----------------SSEEEEEETTSCEEEEETTTCCEEEE-ECCSSCCCEEEEEECTT----SSEEEEEET
T ss_pred EEEcCC-----------------CCEEEEEeCCCcEEEEECCCCceeeE-EeccCCCceEEEEECCC----CCEEEEEcC
Confidence 999996 46899999999999999988764332 23567778999999996 667777777
Q ss_pred CCeEEEEEcCCCcc-------------------------------------------eeeEEeeecCCcEEEEEEcCCCC
Q psy2762 245 DRKVIIWTSNDYVT-------------------------------------------WTPFIMNTFDDVVWNVSWSLTGD 281 (318)
Q Consensus 245 D~~i~vw~~~~~~~-------------------------------------------~~~~~~~~~~~~v~~v~~spdg~ 281 (318)
|+.|++||+..... .....+.+|.+.|.+++|+|+++
T Consensus 213 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 213 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 292 (312)
T ss_dssp TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC
Confidence 77777777654210 01223445677888999999999
Q ss_pred EEEEEe--CCCeEEEEEEC
Q psy2762 282 ILTVSC--GDNSVSLWKEN 298 (318)
Q Consensus 282 ~l~s~~--~D~~v~iW~~~ 298 (318)
+|++++ .|++|++|+.+
T Consensus 293 ~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 293 IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEEECTTTCCEEEEECC
T ss_pred ceEEEEccCCccEEEecCC
Confidence 998887 58899999754
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.1e-39 Score=289.12 Aligned_cols=251 Identities=20% Similarity=0.301 Sum_probs=198.9
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...||...|++++|+|++.+|+||+.|++|+|||+. .++.+.++.+|.+.|++++|++ ++++|++++
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~-----------~~~~~~~~~~h~~~v~~v~~sp--~~~~l~s~~ 137 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLR-----------TGTTYKRFVGHQSEVYSVAFSP--DNRQILSAG 137 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETT-----------SSCEEEEEECCCSCEEEEEECS--STTEEEEEE
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-----------CCcEEEEEcCCCCcEEEEEECC--CCCEEEEEc
Confidence 467999999999999999999999999999999996 3467888999999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCC--------CcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF--------GLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--------~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~ 159 (318)
.|++|++||+.............|...|.+++|+|+.. +.++++++.|+.|++||. .. .....+.+|.
T Consensus 138 ~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~--~~--~~~~~~~~h~ 213 (343)
T 2xzm_R 138 AEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT--NF--QIRYTFKAHE 213 (343)
T ss_dssp TTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET--TT--EEEEEEECCS
T ss_pred CCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC--CC--ceeEEEcCcc
Confidence 99999999987542222112236888999999999742 158999999999999983 11 1234556899
Q ss_pred cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762 160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239 (318)
Q Consensus 160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l 239 (318)
.+|.+++|+|+ +++||+|+.|++|+|||+..... ....+ .+...|++++|+|+ +.+|
T Consensus 214 ~~v~~~~~s~~-----------------g~~l~sgs~dg~v~iwd~~~~~~-~~~~~-~~~~~v~~v~~sp~----~~~l 270 (343)
T 2xzm_R 214 SNVNHLSISPN-----------------GKYIATGGKDKKLLIWDILNLTY-PQREF-DAGSTINQIAFNPK----LQWV 270 (343)
T ss_dssp SCEEEEEECTT-----------------SSEEEEEETTCEEEEEESSCCSS-CSEEE-ECSSCEEEEEECSS----SCEE
T ss_pred ccceEEEECCC-----------------CCEEEEEcCCCeEEEEECCCCcc-cceee-cCCCcEEEEEECCC----CCEE
Confidence 99999999997 57899999999999999843321 11222 24556999999996 5555
Q ss_pred EEEeCCCeEEEEEcCCCcceeeEEee-----------ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 240 ASCSQDRKVIIWTSNDYVTWTPFIMN-----------TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 240 ~s~s~D~~i~vw~~~~~~~~~~~~~~-----------~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
+ ++.|+.|++|++..........+. +|...|.+++|+|+|++|++|+.||+|++|+.++
T Consensus 271 a-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 271 A-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp E-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred E-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 5 567888999998764321111221 5667899999999999999999999999999754
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-38 Score=288.35 Aligned_cols=244 Identities=22% Similarity=0.369 Sum_probs=202.3
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV 92 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v 92 (318)
...|++++|+|+|++|++|+.|++|+|||+. .++.+..+.+|.+.|++++|++ ++.+|++++.|++|
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~-----------~~~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~d~~v 189 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIE-----------NRKIVMILQGHEQDIYSLDYFP--SGDKLVSGSGDRTV 189 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSEE
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECC-----------CCcEEEEEccCCCCEEEEEEcC--CCCEEEEecCCCcE
Confidence 3459999999999999999999999999996 3567888999999999999974 58999999999999
Q ss_pred EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-------ccccccccee
Q psy2762 93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-------AAHTIGCNAV 165 (318)
Q Consensus 93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-------~~h~~~v~~~ 165 (318)
++||+.+++.... +. +...+.+++|+|.+ +.++++|+.|+.|++||...+. ....+ .+|...|.++
T Consensus 190 ~iwd~~~~~~~~~--~~-~~~~v~~~~~~~~~-~~~l~~~s~d~~v~iwd~~~~~---~~~~~~~~~~~~~~h~~~v~~v 262 (393)
T 1erj_A 190 RIWDLRTGQCSLT--LS-IEDGVTTVAVSPGD-GKYIAAGSLDRAVRVWDSETGF---LVERLDSENESGTGHKDSVYSV 262 (393)
T ss_dssp EEEETTTTEEEEE--EE-CSSCEEEEEECSTT-CCEEEEEETTSCEEEEETTTCC---EEEEEC------CCCSSCEEEE
T ss_pred EEEECCCCeeEEE--EE-cCCCcEEEEEECCC-CCEEEEEcCCCcEEEEECCCCc---EEEeecccccCCCCCCCCEEEE
Confidence 9999998764433 32 56789999999942 6799999999999999975432 11222 4688899999
Q ss_pred eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE----------EEEEEcccCCCCeeEEEEccCCCCC
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW----------IEETKLENHSDWVRDVAWAPSWGLS 235 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~----------~~~~~~~~h~~~V~~v~~sp~~~~~ 235 (318)
+|+|+ +.+|++|+.|++|+|||+..... .....+.+|...|.+++|+|+
T Consensus 263 ~~~~~-----------------g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---- 321 (393)
T 1erj_A 263 VFTRD-----------------GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN---- 321 (393)
T ss_dssp EECTT-----------------SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG----
T ss_pred EECCC-----------------CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCC----
Confidence 99997 47899999999999999865321 123456799999999999996
Q ss_pred ccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC------CCCEEEEEeCCCeEEEEEECC
Q psy2762 236 KCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL------TGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 236 ~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp------dg~~l~s~~~D~~v~iW~~~~ 299 (318)
+.+|++++.|++|++||..... ....+.+|...|.+++|+| ++++|+|++.|++|+||+...
T Consensus 322 ~~~l~sgs~D~~v~iwd~~~~~--~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 322 DEYILSGSKDRGVLFWDKKSGN--PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp GCEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCe--EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 8899999999999999988754 2455678999999999986 689999999999999999653
No 29
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-38 Score=279.59 Aligned_cols=251 Identities=20% Similarity=0.270 Sum_probs=205.6
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|...|.+++|+|++++|++|+.|++|+|||+. +++.+..+++|.+.|++++|++ ++.+|+||+
T Consensus 50 ~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~-----------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~sgs 116 (304)
T 2ynn_A 50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-----------TGEKVVDFEAHPDYIRSIAVHP--TKPYVLSGS 116 (304)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-----------TCCEEEEEECCSSCEEEEEECS--SSSEEEEEE
T ss_pred EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC-----------CCcEEEEEeCCCCcEEEEEEcC--CCCEEEEEC
Confidence 345799999999999999999999999999999986 3567889999999999999964 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|++|++||+.++.. ....+.+|...|.+++|+|.+ +.++++|+.|++|++||+..... ......+|..++..+.|
T Consensus 117 ~D~~v~lWd~~~~~~-~~~~~~~h~~~v~~v~~~p~~-~~~l~sgs~D~~v~iwd~~~~~~--~~~~~~~~~~~v~~~~~ 192 (304)
T 2ynn_A 117 DDLTVKLWNWENNWA-LEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDY 192 (304)
T ss_dssp TTSCEEEEEGGGTTE-EEEEECCCCSCEEEEEECTTC-TTEEEEEETTSEEEEEETTCSSC--SEEEECCCTTCEEEEEE
T ss_pred CCCeEEEEECCCCcc-hhhhhcccCCcEEEEEECCCC-CCEEEEEeCCCeEEEEECCCCCc--cceeccCCcCcEEEEEE
Confidence 999999999987642 334577899999999999953 56899999999999999754332 12222356677888888
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 247 (318)
+|.. .+.+|++|+.|++|+|||++++++ ..++.+|...|.+++|+|+ +.+|+|++.|++
T Consensus 193 ~~~~---------------~~~~l~s~s~D~~i~iWd~~~~~~--~~~~~~h~~~v~~~~~~p~----~~~l~s~s~Dg~ 251 (304)
T 2ynn_A 193 YPLP---------------DKPYMITASDDLTIKIWDYQTKSC--VATLEGHMSNVSFAVFHPT----LPIIISGSEDGT 251 (304)
T ss_dssp CCST---------------TCCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSS----SSEEEEEETTSC
T ss_pred EEcC---------------CCCEEEEEcCCCeEEEEeCCCCcc--ceeeCCCCCCEEEEEECCC----CCEEEEEcCCCe
Confidence 8741 146899999999999999988764 4667899999999999996 779999999999
Q ss_pred EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC--EEEEEeCCCeEEEEEECC
Q psy2762 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD--ILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~--~l~s~~~D~~v~iW~~~~ 299 (318)
|+|||..+.. ....+..+...+++++|+|+|. +||+++.| .+.+|++..
T Consensus 252 i~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 252 LKIWNSSTYK--VEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp EEEEETTTCC--EEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred EEEEECCCCc--eeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 9999998754 2345567778999999999885 57777655 567887554
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.7e-38 Score=286.19 Aligned_cols=252 Identities=23% Similarity=0.356 Sum_probs=200.6
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc------------------cCeEEE
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS------------------GPVWQV 72 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~------------------~~V~~v 72 (318)
+|...|.+++|+|+|++|++|+ |++++||++.. +..+..+..|. ..|.++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~-----------g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v 129 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSD-----------GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSV 129 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTT-----------CCEEEEECC-----------------CCCCBEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecC-----------CCEEEEecCccccccccccccccccCCCceeEEEE
Confidence 6999999999999999999976 78999999863 34455555443 349999
Q ss_pred EecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce
Q psy2762 73 AWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES 152 (318)
Q Consensus 73 ~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~ 152 (318)
+|++ ++++||+|+.|++|+|||+.+++. ...+.+|...|.+++|+|+ +.++++++.|++|++||+.... .
T Consensus 130 ~~s~--dg~~l~s~~~d~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~~----~ 199 (393)
T 1erj_A 130 CFSP--DGKFLATGAEDRLIRIWDIENRKI--VMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQ----C 199 (393)
T ss_dssp EECT--TSSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTE----E
T ss_pred EECC--CCCEEEEEcCCCeEEEEECCCCcE--EEEEccCCCCEEEEEEcCC--CCEEEEecCCCcEEEEECCCCe----e
Confidence 9974 589999999999999999988753 4457789999999999998 6789999999999999974432 2
Q ss_pred eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE-----EcccCCCCeeEEE
Q psy2762 153 RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET-----KLENHSDWVRDVA 227 (318)
Q Consensus 153 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~-----~~~~h~~~V~~v~ 227 (318)
.....+...+..++|+|.. +.+|++|+.|++|+|||..++...... ...+|...|++++
T Consensus 200 ~~~~~~~~~v~~~~~~~~~----------------~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 200 SLTLSIEDGVTTVAVSPGD----------------GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp EEEEECSSCEEEEEECSTT----------------CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred EEEEEcCCCcEEEEEECCC----------------CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 2223456678899999842 478999999999999999877543322 1268999999999
Q ss_pred EccCCCCCccEEEEEeCCCeEEEEEcCCCcc----------eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVT----------WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 228 ~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~----------~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
|+|+ +.+|++++.|++|++||+..... .....+.+|...|.+++|+|++++|++++.|++|++||.
T Consensus 264 ~~~~----g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 264 FTRD----GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp ECTT----SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred ECCC----CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 9996 88999999999999999875321 012245578899999999999999999999999999998
Q ss_pred CCCCceE
Q psy2762 298 NTDGAWQ 304 (318)
Q Consensus 298 ~~~~~~~ 304 (318)
..+....
T Consensus 340 ~~~~~~~ 346 (393)
T 1erj_A 340 KSGNPLL 346 (393)
T ss_dssp TTCCEEE
T ss_pred CCCeEEE
Confidence 7765443
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.9e-38 Score=299.75 Aligned_cols=239 Identities=29% Similarity=0.500 Sum_probs=207.3
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|...|.+++|+|+|++|++++.|++|++||.. +..+.++.+|...|.+++|++ ++++|++++
T Consensus 339 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~------------~~~~~~~~~~~~~v~~~~~s~--dg~~l~~~~ 404 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN------------GQLLQTLTGHSSSVRGVAFSP--DGQTIASAS 404 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT------------CCEEEEEECCSSCEEEEEECT--TSSCEEEEE
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC------------CCEEEEecCCCCCeEEEEECC--CCCEEEEEe
Confidence 346899999999999999999999999999999964 356788999999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|++|++||... + ....+.+|...|.+++|+|+ +.++++++.|++|++|+.. . .....+.+|..++.+++|
T Consensus 405 ~d~~v~~~~~~~-~--~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d~~v~~w~~~-~---~~~~~~~~~~~~v~~~~~ 475 (577)
T 2ymu_A 405 DDKTVKLWNRNG-Q--LLQTLTGHSSSVWGVAFSPD--DQTIASASDDKTVKLWNRN-G---QLLQTLTGHSSSVRGVAF 475 (577)
T ss_dssp TTSEEEEECTTC-C--EEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETT-S---CEEEEEECCSSCEEEEEE
T ss_pred CCCEEEEEeCCC-C--EEEEecCCCCCeEEEEECCC--CCEEEEEcCCCEEEEEECC-C---CEEEEEcCCCCCEEEEEE
Confidence 999999999653 3 33456789999999999998 6789999999999999852 1 134566789999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 247 (318)
+|+ +++||+++.|++|+|||... + ....+.+|...|++|+|+|+ +.+|++++.|+.
T Consensus 476 spd-----------------~~~las~~~d~~i~iw~~~~-~--~~~~~~~h~~~v~~l~~s~d----g~~l~s~~~dg~ 531 (577)
T 2ymu_A 476 SPD-----------------GQTIASASDDKTVKLWNRNG-Q--LLQTLTGHSSSVRGVAFSPD----GQTIASASDDKT 531 (577)
T ss_dssp CTT-----------------SCEEEEEETTSEEEEEETTS-C--EEEEEECCSSCEEEEEECTT----SSCEEEEETTSE
T ss_pred cCC-----------------CCEEEEEeCCCEEEEEcCCC-C--EEEEEeCCCCCEEEEEEcCC----CCEEEEEECcCE
Confidence 997 57899999999999999754 3 24567899999999999996 889999999999
Q ss_pred EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296 (318)
Q Consensus 248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~ 296 (318)
|+|||.... ....+.+|.+.|++++|+|||++|+|++.|++|++||
T Consensus 532 v~lwd~~~~---~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 532 VKLWNRNGQ---LLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECTTSC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEeCCCC---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999997542 3456778999999999999999999999999999996
No 32
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-38 Score=313.71 Aligned_cols=288 Identities=46% Similarity=0.871 Sum_probs=226.0
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
+..||.+.|++++|+|+|++|++|+.||+|+|||+... .+..+.++.+|.+.|++++|+++.++++|++|+
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~---------~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s 74 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE---------THKLIDTLTGHEGPVWRVDWAHPKFGTILASCS 74 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT---------EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC---------CCccceeccCCcCceEEEEecCCCCCCEEEEEe
Confidence 45799999999999999999999999999999998632 456788999999999999998655589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.||+|++||+.++.......+.+|...|.+++|+|+..+.++++|+.|+.|++||+..... .....+.+|..++.++.|
T Consensus 75 ~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~-~~~~~~~~~~~~v~~l~~ 153 (753)
T 3jro_A 75 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVNSASW 153 (753)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-CCCEEEECCSSCEEEEEE
T ss_pred CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-cceeEeecCCCceEEEEe
Confidence 9999999999988655666778899999999999974356899999999999999865532 123345689999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D 245 (318)
+|........ ......+.+|++|+.||+|++||+..+. ......+.+|...|++++|+|+.. .+.+|++++.|
T Consensus 154 ~p~~~~~~~~----~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~~~~l~s~s~D 228 (753)
T 3jro_A 154 APATIEEDGE----HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL-LRSYLASVSQD 228 (753)
T ss_dssp CCCC-------------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS-SSEEEEEEESS
T ss_pred cCcccccccc----cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCC-CCCEEEEEecC
Confidence 9941000000 0000114689999999999999987652 234566789999999999999510 17899999999
Q ss_pred CeEEEEEcCCCcce---eeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeec
Q psy2762 246 RKVIIWTSNDYVTW---TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 310 (318)
Q Consensus 246 ~~i~vw~~~~~~~~---~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~ 310 (318)
++|++|++...... .......|...|++++|+|+|++|++++.||.|++|+.+.++.|.+...+.
T Consensus 229 g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~ 296 (753)
T 3jro_A 229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVH 296 (753)
T ss_dssp SCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCCBCCCCBC
T ss_pred CEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCcccccccc
Confidence 99999998874311 111223477889999999999999999999999999999888887665543
No 33
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.2e-37 Score=277.00 Aligned_cols=262 Identities=19% Similarity=0.315 Sum_probs=219.2
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
..|++.|++++|+|++++|++|+.|++|+|||+... ....+..+.+|.+.|.+++|++ ++++|++++.|
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~---------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d 73 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN---------KWVQVHELKEHNGQVTGVDWAP--DSNRIVTCGTD 73 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT---------EEEEEEEEECCSSCEEEEEEET--TTTEEEEEETT
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC---------cEEeeeeecCCCCcccEEEEeC--CCCEEEEEcCC
Confidence 469999999999999999999999999999998632 1227888999999999999974 58999999999
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccceeeeC
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWG 168 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~~ 168 (318)
++|++||+.+++......+..|...|.+++|+|+ +.++++++.|+.|++|++...........+ ..|...+.+++|+
T Consensus 74 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 74 RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred CeEEEEECCCCeeeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence 9999999988776666666789999999999998 678999999999999999765432222233 4788899999999
Q ss_pred CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc------------------CCeEEEEEEcccCCCCeeEEEEcc
Q psy2762 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE------------------GDKWIEETKLENHSDWVRDVAWAP 230 (318)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~------------------~~~~~~~~~~~~h~~~V~~v~~sp 230 (318)
|+ +.+|++++.|+.|++||+. .++ ....+.+|...|.+++|+|
T Consensus 152 ~~-----------------~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 152 PN-----------------SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE--LMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp TT-----------------SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC--EEEECCCCSSCEEEEEECS
T ss_pred CC-----------------CCEEEEEcCCCCEEEEEcccccccccccccccccccchhh--heEecCCCCCeEEEEEECC
Confidence 96 4689999999999999953 333 3456779999999999999
Q ss_pred CCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC-CCceEEEeee
Q psy2762 231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT-DGAWQCITEM 309 (318)
Q Consensus 231 ~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~-~~~~~~~~~~ 309 (318)
+ +.+|++++.|+.|++||+.... ....+..|...|.+++|+|+|++|+++ .|+.+++|+... .+.|.++..+
T Consensus 213 ~----~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 213 N----GSRVAWVSHDSTVCLADADKKM--AVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp S----SSEEEEEETTTEEEEEEGGGTT--EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCC
T ss_pred C----CCEEEEEeCCCEEEEEECCCCc--eeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeecc
Confidence 6 7899999999999999997654 234556788899999999999988877 899999999876 3577776554
Q ss_pred c
Q psy2762 310 G 310 (318)
Q Consensus 310 ~ 310 (318)
.
T Consensus 286 ~ 286 (372)
T 1k8k_C 286 D 286 (372)
T ss_dssp C
T ss_pred C
Confidence 3
No 34
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.5e-39 Score=289.43 Aligned_cols=263 Identities=16% Similarity=0.253 Sum_probs=201.6
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
..|.+.|++++|+|+|++|++|+.|++|+|||+... ....+..+.+|.+.|++++|++ ++++|++++.|
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~---------~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~d 76 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN---------GWKHARTFSDHDKIVTCVDWAP--KSNRIVTCSQD 76 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT---------EEEECCCBCCCSSCEEEEEECT--TTCCEEEEETT
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC---------ceEEEEEEecCCceEEEEEEeC--CCCEEEEEeCC
Confidence 346789999999999999999999999999999621 1156778899999999999974 48999999999
Q ss_pred CeEEEEeCCCCc-EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-cccccceeee
Q psy2762 90 RKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVSW 167 (318)
Q Consensus 90 g~v~vWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~-h~~~v~~~~~ 167 (318)
++|++||+.++. ......+.+|...|.+++|+|+ +.++++++.|+.|++|++...........+.. |...+.+++|
T Consensus 77 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 77 RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN--EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp SSEEEC------CCCCEEECCCCSSCEEEEECCTT--SSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred CeEEEEEcCCCCceeeeeEecccCCceEEEEECCC--CCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 999999998765 3345567789999999999998 67899999999999999865432112345555 9999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe----------------EEEEEEcccCCCCeeEEEEccC
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK----------------WIEETKLENHSDWVRDVAWAPS 231 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~----------------~~~~~~~~~h~~~V~~v~~sp~ 231 (318)
+|+ +.+|++++.|++|++||+..++ ......+ +|...|++++|+|+
T Consensus 155 ~~~-----------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~ 216 (377)
T 3dwl_C 155 HPN-----------------NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPS 216 (377)
T ss_dssp CTT-----------------SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTT
T ss_pred cCC-----------------CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCC
Confidence 997 4689999999999999985211 1234445 89999999999996
Q ss_pred CCCCccEEEEEeCCCeEEEEEcCCCccee--eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeee
Q psy2762 232 WGLSKCMIASCSQDRKVIIWTSNDYVTWT--PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309 (318)
Q Consensus 232 ~~~~~~~l~s~s~D~~i~vw~~~~~~~~~--~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~ 309 (318)
+.+|++++.|++|++||+....... ...+..|...|.+++|+|+|++|++++.|+.+ +|+...+ .|.....+
T Consensus 217 ----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~ 290 (377)
T 3dwl_C 217 ----GNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNES-GWAHTRDL 290 (377)
T ss_dssp ----SSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC----CCSBCC
T ss_pred ----CCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCC-ceEEEeee
Confidence 7899999999999999998764310 23456788899999999999999988877666 7765543 34443333
No 35
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-38 Score=294.21 Aligned_cols=256 Identities=11% Similarity=0.131 Sum_probs=197.7
Q ss_pred cCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 9 DTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
..+|...|++++|+| ++++||+|+.||+|+|||+... ....+..+.+|.+.|++++|+ |.++.+|+|||
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~---------~~~~~~~~~gH~~~V~~l~f~-p~~~~~l~s~s 184 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK---------DKPTFIKGIGAGGSITGLKFN-PLNTNQFYASS 184 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCC---------SCCEEECCCSSSCCCCEEEEC-SSCTTEEEEEC
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC---------CceeEEEccCCCCCEEEEEEe-CCCCCEEEEEe
Confidence 357889999999999 5789999999999999998632 234456678999999999996 45689999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.||+|+|||+.+...........+...+.+++|+|+ +.++++|+.|+.|++||.... .+..+.+|...|.+++|
T Consensus 185 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~g~~dg~i~~wd~~~~----~~~~~~~h~~~v~~v~~ 258 (435)
T 4e54_B 185 MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSAS--SRMVVTGDNVGNVILLNMDGK----ELWNLRMHKKKVTHVAL 258 (435)
T ss_dssp SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETT--TTEEEEECSSSBEEEEESSSC----BCCCSBCCSSCEEEEEE
T ss_pred CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCC--CCEEEEEeCCCcEeeeccCcc----eeEEEecccceEEeeee
Confidence 999999999987643333333334556889999998 779999999999999997421 34556789999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE-EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI-EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~-~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~ 246 (318)
+|+. ..+|++|+.|++|+|||+...+.. ......+|...|++|+|+|+ +.+|++++.|+
T Consensus 259 ~p~~----------------~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spd----g~~l~s~~~D~ 318 (435)
T 4e54_B 259 NPCC----------------DWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPD----GARLLTTDQKS 318 (435)
T ss_dssp CTTC----------------SSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTT----SSEEEEEESSS
T ss_pred cCCC----------------ceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCC----CCeeEEEcCCC
Confidence 9963 247899999999999998765321 12234689999999999996 88999999999
Q ss_pred eEEEEEcCCCcce-----------------------------------------------eeE-----------E-eeec
Q psy2762 247 KVIIWTSNDYVTW-----------------------------------------------TPF-----------I-MNTF 267 (318)
Q Consensus 247 ~i~vw~~~~~~~~-----------------------------------------------~~~-----------~-~~~~ 267 (318)
+|+||++...... ... . ...|
T Consensus 319 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~ 398 (435)
T 4e54_B 319 EIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE 398 (435)
T ss_dssp CEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS
T ss_pred EEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC
Confidence 9999997652100 000 0 1123
Q ss_pred CCcEEEE-EEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 268 DDVVWNV-SWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 268 ~~~v~~v-~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
...|.++ +|+|||++||+|+ |++|+||+.+.+.
T Consensus 399 ~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 399 SSGISSLNEFNPMGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp CCCCCCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred CCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence 4556666 6999999999876 7899999987653
No 36
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.9e-37 Score=298.44 Aligned_cols=257 Identities=20% Similarity=0.316 Sum_probs=207.5
Q ss_pred ecCCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~ 86 (318)
.+.||.+.|++++|+|++ .+|+|||.|++|+|||+.... ...+.....+.+|.+.|.+++|++ ++++|+||
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~------~~~~~~~~~~~~h~~~v~~v~~s~--~g~~l~sg 448 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDD------KAYGVAQRRLTGHSHFVEDVVLSS--DGQFALSG 448 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCST------TCSCEEEEEEECCSSCEEEEEECT--TSSEEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCC------cccccccceecCCCCcEEEEEECC--CCCEEEEE
Confidence 467999999999999874 799999999999999986321 112455678999999999999974 58999999
Q ss_pred ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce-eeeccccccccee
Q psy2762 87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAV 165 (318)
Q Consensus 87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~-~~~~~h~~~v~~~ 165 (318)
+.|++|+|||+.++.. ...+.+|...|.+++|+|+ +.++++++.|++|++|+...... ... ....+|...|.++
T Consensus 449 s~Dg~v~vwd~~~~~~--~~~~~~h~~~v~~~~~s~~--~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 449 SWDGELRLWDLAAGVS--TRRFVGHTKDVLSVAFSLD--NRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCV 523 (694)
T ss_dssp ETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECTT--SSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEE
T ss_pred eCCCcEEEEECCCCcc--eeEEeCCCCCEEEEEEeCC--CCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEE
Confidence 9999999999988753 4456789999999999998 67899999999999998632210 011 1123688889999
Q ss_pred eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D 245 (318)
+|+|+.. ...|++|+.|++|+|||+.++++ ...+.+|...|++|+|+|+ +.+|++++.|
T Consensus 524 ~~~~~~~---------------~~~l~s~s~d~~v~vwd~~~~~~--~~~~~~h~~~v~~v~~spd----g~~l~sg~~D 582 (694)
T 3dm0_A 524 RFSPNTL---------------QPTIVSASWDKTVKVWNLSNCKL--RSTLAGHTGYVSTVAVSPD----GSLCASGGKD 582 (694)
T ss_dssp EECSCSS---------------SCEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTT----SSEEEEEETT
T ss_pred EEeCCCC---------------cceEEEEeCCCeEEEEECCCCcE--EEEEcCCCCCEEEEEEeCC----CCEEEEEeCC
Confidence 9999631 24799999999999999988754 4567899999999999996 8899999999
Q ss_pred CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
++|+|||+..... .. ...+...|.+++|+|++.+|++++ |+.|+|||++.+..
T Consensus 583 g~i~iwd~~~~~~--~~-~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 583 GVVLLWDLAEGKK--LY-SLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSI 635 (694)
T ss_dssp SBCEEEETTTTEE--EE-CCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEE
T ss_pred CeEEEEECCCCce--EE-EecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCC
Confidence 9999999987532 11 223456899999999999887665 66799999877543
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.2e-36 Score=284.55 Aligned_cols=240 Identities=29% Similarity=0.501 Sum_probs=207.0
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|...|.+++|+|++++|++++.|++|++||+. +..+..+.+|...|++++|++ ++++|++++
T Consensus 298 ~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~------------~~~~~~~~~~~~~v~~~~~s~--~g~~l~~~~ 363 (577)
T 2ymu_A 298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN------------GQHLQTLTGHSSSVWGVAFSP--DGQTIASAS 363 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT------------SCEEEEECCCSSCEEEEEECT--TSSEEEEEE
T ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC------------CCeeEEEeCCCCCEEEEEECC--CCCEEEEEe
Confidence 457899999999999999999999999999999985 235678899999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|++|++||... + ....+.+|...|.+++|+|+ +.++++++.|+.|++|+. .. .....+.+|..++..++|
T Consensus 364 ~dg~v~~~~~~~-~--~~~~~~~~~~~v~~~~~s~d--g~~l~~~~~d~~v~~~~~-~~---~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 364 DDKTVKLWNRNG-Q--LLQTLTGHSSSVRGVAFSPD--GQTIASASDDKTVKLWNR-NG---QLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp TTSEEEEEETTC-C--EEEEEECCSSCEEEEEECTT--SSCEEEEETTSEEEEECT-TC---CEEEEEECCSSCEEEEEE
T ss_pred CCCEEEEEcCCC-C--EEEEecCCCCCeEEEEECCC--CCEEEEEeCCCEEEEEeC-CC---CEEEEecCCCCCeEEEEE
Confidence 999999999653 3 33456789999999999998 678999999999999984 11 134556789999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 247 (318)
+|+ +.+|++++.|++|++||.... ....+.+|...|++++|+|+ +.+|++++.|++
T Consensus 435 s~d-----------------~~~l~~~~~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~spd----~~~las~~~d~~ 490 (577)
T 2ymu_A 435 SPD-----------------DQTIASASDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPD----GQTIASASDDKT 490 (577)
T ss_dssp CTT-----------------SSEEEEEETTSEEEEEETTSC---EEEEEECCSSCEEEEEECTT----SCEEEEEETTSE
T ss_pred CCC-----------------CCEEEEEcCCCEEEEEECCCC---EEEEEcCCCCCEEEEEEcCC----CCEEEEEeCCCE
Confidence 997 468999999999999997653 24567799999999999996 889999999999
Q ss_pred EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
|+||+.... ....+.+|...|.+++|+|||++||+++.|++|+|||.
T Consensus 491 i~iw~~~~~---~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 491 VKLWNRNGQ---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EEEEETTSC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEEEcCCCC---EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 999997542 34566789999999999999999999999999999984
No 38
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-35 Score=264.51 Aligned_cols=252 Identities=18% Similarity=0.292 Sum_probs=208.6
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
.+.||++.|++++|+|+|++|++|+.|+.|+|||+. .++.+..+.+|.+.|++++|++ ++++|++++
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~ 93 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSL-----------NGERLGTLDGHTGTIWSIDVDC--FTKYCVTGS 93 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETT-----------TCCEEEEECCCSSCEEEEEECT--TSSEEEEEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCC-----------CchhhhhhhhcCCcEEEEEEcC--CCCEEEEEe
Confidence 457999999999999999999999999999999986 3467889999999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-----CeEEEEEeecCCCCc--------ceee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-----GTISFLTYMSDTNSW--------ESRK 154 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-----~~i~i~~~~~~~~~~--------~~~~ 154 (318)
.|++|++||+.+++..... . +...|.+++|+|+ +.++++++.+ +.|.+|++....... ....
T Consensus 94 ~dg~i~iwd~~~~~~~~~~--~-~~~~v~~~~~~~~--~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCVATW--K-SPVPVKRVEFSPC--GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK 168 (369)
T ss_dssp TTTEEEEEETTTCCEEEEE--E-CSSCEEEEEECTT--SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred CCCeEEEEECCCCcEEEEe--e-cCCCeEEEEEccC--CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence 9999999999988754443 3 7889999999998 6789999988 999999987654211 1122
Q ss_pred eccccc--ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEEEcccCCCCeeEEEEccC
Q psy2762 155 IAAHTI--GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPS 231 (318)
Q Consensus 155 ~~~h~~--~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~ 231 (318)
+..|.. .+..++|+|+ +.+|++++.|+.|++||+.+ .+ ....+..|...|.+++|+|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~ 229 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTK-----------------GKYIIAGHKDGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPD 229 (369)
T ss_dssp EECCTTCCCEEEEEECGG-----------------GCEEEEEETTSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTT
T ss_pred ccCCcCccceeEEEEcCC-----------------CCEEEEEcCCCEEEEEECCCCcE--eEEEEecCCCceeEEEECCC
Confidence 334554 7888999986 57899999999999999987 44 34567789999999999996
Q ss_pred CCCCccEEEEEeCCCeEEEEEcCCCccee---------------------------------------------------
Q psy2762 232 WGLSKCMIASCSQDRKVIIWTSNDYVTWT--------------------------------------------------- 260 (318)
Q Consensus 232 ~~~~~~~l~s~s~D~~i~vw~~~~~~~~~--------------------------------------------------- 260 (318)
+.+|++++.|+.|++||+.......
T Consensus 230 ----~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 305 (369)
T 3zwl_B 230 ----LTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE 305 (369)
T ss_dssp ----SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC
T ss_pred ----CCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC
Confidence 8899999999999999987642100
Q ss_pred --eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 261 --PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 261 --~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
...+..|...|.+++|+|+|++|++++.||+|+||+++.+
T Consensus 306 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 306 EEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred cchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 1122346788999999999999999999999999998763
No 39
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.2e-35 Score=273.03 Aligned_cols=249 Identities=20% Similarity=0.357 Sum_probs=205.3
Q ss_pred cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
..+|.+.|++++|+|+|++|++|+.||+|+|||+. .++.+.++.+|...|.+++|+ +.+|++|+.
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~-----------~~~~~~~~~~h~~~v~~~s~~----~~~l~sgs~ 207 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-----------QQKRLRNMTSHSARVGSLSWN----SYILSSGSR 207 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEEE----TTEEEEEET
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC-----------CCcEEEEEeCCCCceEEEeeC----CCEEEEEeC
Confidence 35788999999999999999999999999999996 457889999999999999984 689999999
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc-ceeeecccccccceeee
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~-~~~~~~~h~~~v~~~~~ 167 (318)
|+++++||...... ....+.+|...+..+.++|+ +.++++++.|+.|++|+........ .......|...|..++|
T Consensus 208 d~~i~~~d~~~~~~-~~~~~~~h~~~~~~~~~~~~--g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 284 (420)
T 4gga_A 208 SGHIHHHDVRVAEH-HVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 284 (420)
T ss_dssp TSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEE
T ss_pred CCceeEeeecccce-eeEEecccccceeeeeecCC--CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeee
Confidence 99999999876442 34457789999999999998 7799999999999999986554221 23344578889999999
Q ss_pred CCCCCCCccccccCCCCCCccceEE--EecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe--
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLV--SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS-- 243 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~la--sgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-- 243 (318)
+|.. ...++ +|+.|++|+|||+.++++.. .+..| ..|.++.|+|+ +..|++++
T Consensus 285 ~p~~----------------~~~la~~~gs~D~~I~iwd~~t~~~~~--~~~~~-~~v~~~~~~~~----~~~lv~~sg~ 341 (420)
T 4gga_A 285 CPWQ----------------SNVLATGGGTSDRHIRIWNVCSGACLS--AVDAH-SQVCSILWSPH----YKELISGHGF 341 (420)
T ss_dssp CTTC----------------TTEEEEEECTTTCEEEEEETTTTEEEE--EEECS-SCEEEEEEETT----TTEEEEEECT
T ss_pred CCCc----------------ccEEEEEeecCCCEEEEEeCCccccce--eeccc-cceeeeeecCC----CCeEEEEEec
Confidence 9964 23444 56789999999999886543 33334 56899999996 55666554
Q ss_pred CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
.|++|+|||..+.. ....+.+|.+.|++++|+|||++|+|++.|++|||||+...
T Consensus 342 ~d~~I~iwd~~~~~--~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 342 AQNQLVIWKYPTMA--KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TTCCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred CCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 79999999998754 34567789999999999999999999999999999998654
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5e-36 Score=292.37 Aligned_cols=248 Identities=19% Similarity=0.312 Sum_probs=199.0
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...||...|++++|+|+|++|+||+.|++|+|||+. .+..+..+.+|.+.|.+++|++ ++.+|+||+
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~-----------~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s 491 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA-----------AGVSTRRFVGHTKDVLSVAFSL--DNRQIVSAS 491 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCSSCEEEEEECT--TSSCEEEEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC-----------CCcceeEEeCCCCCEEEEEEeC--CCCEEEEEe
Confidence 457999999999999999999999999999999996 3567888999999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEE-EecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762 88 YDRKVIIWRGDNGNWFKYY-EYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS 166 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~ 166 (318)
.|++|+|||.......... ...+|...|.+++|+|+....++++++.|++|++||+.... ....+.+|...|.+++
T Consensus 492 ~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~---~~~~~~~h~~~v~~v~ 568 (694)
T 3dm0_A 492 RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK---LRSTLAGHTGYVSTVA 568 (694)
T ss_dssp TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEE
T ss_pred CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc---EEEEEcCCCCCEEEEE
Confidence 9999999998654321111 12468889999999998545689999999999999975432 3445678999999999
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~ 246 (318)
|+|+ +.+|++|+.|++|+|||+.+++.. ..+. +...|.+++|+|+ +.+|+++ .|+
T Consensus 569 ~spd-----------------g~~l~sg~~Dg~i~iwd~~~~~~~--~~~~-~~~~v~~~~~sp~----~~~l~~~-~~~ 623 (694)
T 3dm0_A 569 VSPD-----------------GSLCASGGKDGVVLLWDLAEGKKL--YSLE-ANSVIHALCFSPN----RYWLCAA-TEH 623 (694)
T ss_dssp ECTT-----------------SSEEEEEETTSBCEEEETTTTEEE--ECCB-CSSCEEEEEECSS----SSEEEEE-ETT
T ss_pred EeCC-----------------CCEEEEEeCCCeEEEEECCCCceE--EEec-CCCcEEEEEEcCC----CcEEEEE-cCC
Confidence 9997 478999999999999999887643 3443 4567999999996 6666655 567
Q ss_pred eEEEEEcCCCcceeeEEee-------------------ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762 247 KVIIWTSNDYVTWTPFIMN-------------------TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 247 ~i~vw~~~~~~~~~~~~~~-------------------~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~ 298 (318)
.|+|||+...... ..+. .+.-.+.+++|+|||++|+|++.||+|+||++.
T Consensus 624 ~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 624 GIKIWDLESKSIV--EDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEEETTTTEEE--EEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CEEEEECCCCCCh--hhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 7999999875311 1111 011247899999999999999999999999965
No 41
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.7e-36 Score=271.21 Aligned_cols=253 Identities=17% Similarity=0.207 Sum_probs=203.0
Q ss_pred CCcceeeeeeecCC----CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762 11 GHEDMIHDAEMDYL----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 11 gH~~~v~~~~~~~~----g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~ 86 (318)
.|...|++++|+|+ |++|++|+.||+|+|||+. .++.+..+.+|.+.|.+++|++ .++.+|+++
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~-----------~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~s~ 134 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI-----------TMQCIKHYVGHGNAINELKFHP-RDPNLLLSV 134 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT-----------TCCEEEEEESCCSCEEEEEECS-SCTTEEEEE
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch-----------hceEeeeecCCCCcEEEEEECC-CCCCEEEEE
Confidence 47789999999999 6799999999999999986 3467888999999999999974 358999999
Q ss_pred ECCCeEEEEeCCCCcEEEEEE-ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc---------------
Q psy2762 87 SYDRKVIIWRGDNGNWFKYYE-YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW--------------- 150 (318)
Q Consensus 87 s~Dg~v~vWd~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~--------------- 150 (318)
+.|++|++||+.+++...... +..|...|.+++|+|+ +.++++++.|+.|++||+.......
T Consensus 135 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (366)
T 3k26_A 135 SKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL--GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNR 212 (366)
T ss_dssp ETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT--SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSS
T ss_pred eCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC--CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcc
Confidence 999999999998876433221 1579999999999998 6789999999999999975332100
Q ss_pred ----------ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE----------
Q psy2762 151 ----------ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW---------- 210 (318)
Q Consensus 151 ----------~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~---------- 210 (318)
.......|...+.+++|++ .+|++++.|+.|++||+.+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 273 (366)
T 3k26_A 213 PFISQKIHFPDFSTRDIHRNYVDCVRWLG-------------------DLILSKSCENAIVCWKPGKMEDDIDKIKPSES 273 (366)
T ss_dssp CCCCEEECCCSEEECSSCSSCCCEEEEET-------------------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCC
T ss_pred cccceeeccCccccccCCcceEEEEEEcC-------------------CEEEEEecCCEEEEEeCCCccccccccccCCc
Confidence 0001113777788888763 4799999999999999876432
Q ss_pred --EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce--eeEEeeec--CCcEEEEEEcCCCCEEE
Q psy2762 211 --IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTF--DDVVWNVSWSLTGDILT 284 (318)
Q Consensus 211 --~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~--~~~~~~~~--~~~v~~v~~spdg~~l~ 284 (318)
.....+.+|...|++++|+|+. ++.+|++++.|+.|++|++...... ....+..| ...|.+++|+|+|++|+
T Consensus 274 ~~~~~~~~~~~~~~v~~~~~s~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 351 (366)
T 3k26_A 274 NVTILGRFDYSQCDIWYMRFSMDF--WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 351 (366)
T ss_dssp CEEEEEEEECSSCCSSCCCCEECT--TSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred chheeccccccCCcEEEEEEcCCC--CCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEE
Confidence 3356678899999999999951 2789999999999999999875421 12244555 68999999999999999
Q ss_pred EEeCCCeEEEEEEC
Q psy2762 285 VSCGDNSVSLWKEN 298 (318)
Q Consensus 285 s~~~D~~v~iW~~~ 298 (318)
+++.||.|+|||+.
T Consensus 352 s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 352 AVCDDASIWRWDRL 365 (366)
T ss_dssp EEETTSEEEEEEC-
T ss_pred EEeCCCEEEEEEec
Confidence 99999999999964
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.6e-35 Score=260.53 Aligned_cols=251 Identities=15% Similarity=0.239 Sum_probs=208.8
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe--cccccCeEEEEecCCCCCcEEEEEE
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL--KGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
.+|...|++++|+|++++|++++ |++|+|||+.... ....+..+ .+|...|.+++|++ ++++|++++
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~ 116 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPG--------NKSPVSQLDCLNRDNYIRSCKLLP--DGCTLIVGG 116 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTT--------CCSCSEEEECSCTTSBEEEEEECT--TSSEEEEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCC--------ceeeeecccccCCCCcEEEEEEcC--CCCEEEEEc
Confidence 47999999999999999999999 9999999996321 11122233 37999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|+.|++||+.+++......+..|...|.+++|+|+ +.++++++.|+.|++|++.... ....+..|...+..++|
T Consensus 117 ~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~~~d~~~~~---~~~~~~~~~~~i~~~~~ 191 (337)
T 1gxr_A 117 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQT---LVRQFQGHTDGASCIDI 191 (337)
T ss_dssp SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEE
T ss_pred CCCcEEEEECCCCCcceeeecccCCCceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCc---eeeeeecccCceEEEEE
Confidence 999999999988765555667789999999999998 6789999999999999975432 34455678999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 247 (318)
+|+ +.+|++++.|+.|++||+.+++..... .|...+.+++|+|+ +.+|++++.|+.
T Consensus 192 ~~~-----------------~~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~v~~~~~s~~----~~~l~~~~~~~~ 247 (337)
T 1gxr_A 192 SND-----------------GTKLWTGGLDNTVRSWDLREGRQLQQH---DFTSQIFSLGYCPT----GEWLAVGMESSN 247 (337)
T ss_dssp CTT-----------------SSEEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECTT----SSEEEEEETTSC
T ss_pred CCC-----------------CCEEEEEecCCcEEEEECCCCceEeee---cCCCceEEEEECCC----CCEEEEEcCCCc
Confidence 996 468999999999999999887654332 46778999999996 789999999999
Q ss_pred EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 303 (318)
Q Consensus 248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~ 303 (318)
|++|++.... ...+..|...|.+++|+|+|++|++++.||.|++|+...+...
T Consensus 248 i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 248 VEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEECCCCC---eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 9999998754 3455678899999999999999999999999999998776543
No 43
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-35 Score=269.70 Aligned_cols=254 Identities=20% Similarity=0.352 Sum_probs=206.8
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
+...|...|++++|+|++++|++|+.||.|+|||+. .++.+..+.+|.+.|.+++|. +.+|++++
T Consensus 129 ~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~-----------~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~ 193 (401)
T 4aez_A 129 AETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE-----------SQTKLRTMAGHQARVGCLSWN----RHVLSSGS 193 (401)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TCCEEEEECCCSSCEEEEEEE----TTEEEEEE
T ss_pred eecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc-----------CCeEEEEecCCCCceEEEEEC----CCEEEEEc
Confidence 445589999999999999999999999999999986 346788899999999999994 57999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|+.|++||+..... ....+.+|...|.+++|+|+ +.++++++.|+.|++||+.... ....+..|...+.+++|
T Consensus 194 ~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~v~~~~~ 267 (401)
T 4aez_A 194 RSGAIHHHDVRIANH-QIGTLQGHSSEVCGLAWRSD--GLQLASGGNDNVVQIWDARSSI---PKFTKTNHNAAVKAVAW 267 (401)
T ss_dssp TTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTCSS---EEEEECCCSSCCCEEEE
T ss_pred CCCCEEEEecccCcc-eeeEEcCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEccCCCCC---ccEEecCCcceEEEEEE
Confidence 999999999984332 34456789999999999997 6789999999999999975432 34455689999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEec--CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE--e
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGG--CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC--S 243 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs--~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~--s 243 (318)
+|+. ...+++++ .|+.|++||+.+++... .+ .|...|.+++|+|+ +.+|+++ +
T Consensus 268 ~p~~----------------~~ll~~~~gs~d~~i~i~d~~~~~~~~--~~-~~~~~v~~~~~s~~----~~~l~~~~g~ 324 (401)
T 4aez_A 268 CPWQ----------------SNLLATGGGTMDKQIHFWNAATGARVN--TV-DAGSQVTSLIWSPH----SKEIMSTHGF 324 (401)
T ss_dssp CTTS----------------TTEEEEECCTTTCEEEEEETTTCCEEE--EE-ECSSCEEEEEECSS----SSEEEEEECT
T ss_pred CCCC----------------CCEEEEecCCCCCEEEEEECCCCCEEE--EE-eCCCcEEEEEECCC----CCeEEEEeec
Confidence 9963 24677765 89999999998876543 33 36678999999996 7788884 4
Q ss_pred CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762 244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305 (318)
Q Consensus 244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~ 305 (318)
.|+.|++|+...........+..|...|.+++|+|+|++|++++.||+|++|++..+.....
T Consensus 325 ~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 325 PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp TTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred CCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 89999999987754323334567889999999999999999999999999999888655443
No 44
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.9e-35 Score=267.57 Aligned_cols=256 Identities=12% Similarity=0.147 Sum_probs=200.8
Q ss_pred eecCCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762 7 LVDTGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS 85 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las 85 (318)
....+|.+.|++++|+|++ ++|++|+.|++|+|||+... .......+.+|.+.|.+++|++ .++.+|++
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s 136 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ---------NKTSFIQGMGPGDAITGMKFNQ-FNTNQLFV 136 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST---------TCEEEECCCSTTCBEEEEEEET-TEEEEEEE
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc---------ccceeeecCCcCCceeEEEeCC-CCCCEEEE
Confidence 3557999999999999999 99999999999999999732 1222333347999999999974 35799999
Q ss_pred EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762 86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV 165 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~ 165 (318)
++.|++|++||+.+...........|...|.+++|+|+ +.++++++.|+.|++||+. . .....+.+|...+.++
T Consensus 137 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~-~---~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 137 SSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVS--RQMLATGDSTGRLLLLGLD-G---HEIFKEKLHKAKVTHA 210 (383)
T ss_dssp EETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETT--TTEEEEEETTSEEEEEETT-S---CEEEEEECSSSCEEEE
T ss_pred EeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCC--CCEEEEECCCCCEEEEECC-C---CEEEEeccCCCcEEEE
Confidence 99999999999986433222222345588999999998 6789999999999999972 2 2355667899999999
Q ss_pred eeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC----CeEEEEEEcccCCCCeeEEEEcc-CCCCCccEE
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG----DKWIEETKLENHSDWVRDVAWAP-SWGLSKCMI 239 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~----~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~~~l 239 (318)
+|+|+ +. +|++++.|++|++||+.. +.+. ..+ +|...|++++|+| + +.+|
T Consensus 211 ~~~~~-----------------~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~-~~~~~v~~~~~s~~~----~~~l 266 (383)
T 3ei3_B 211 EFNPR-----------------CDWLMATSSVDATVKLWDLRNIKDKNSYI--AEM-PHEKPVNAAYFNPTD----STKL 266 (383)
T ss_dssp EECSS-----------------CTTEEEEEETTSEEEEEEGGGCCSTTCEE--EEE-ECSSCEEEEEECTTT----SCEE
T ss_pred EECCC-----------------CCCEEEEEeCCCEEEEEeCCCCCcccceE--EEe-cCCCceEEEEEcCCC----CCEE
Confidence 99997 34 799999999999999886 3332 233 6999999999999 6 7899
Q ss_pred EEEeCCCeEEEEEcCCCcceeeEEeeec-----------------CCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTF-----------------DDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 240 ~s~s~D~~i~vw~~~~~~~~~~~~~~~~-----------------~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
++++.|+.|++||+...... ..+..| ...+..++|+|||++ +++.|++|+|||+..+..
T Consensus 267 ~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 267 LTTDQRNEIRVYSSYDWSKP--DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp EEEESSSEEEEEETTBTTSC--SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE
T ss_pred EEEcCCCcEEEEECCCCccc--cccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce
Confidence 99999999999998765421 112211 134556788888877 788999999999887655
Q ss_pred eEEE
Q psy2762 303 WQCI 306 (318)
Q Consensus 303 ~~~~ 306 (318)
...+
T Consensus 343 ~~~l 346 (383)
T 3ei3_B 343 VHQL 346 (383)
T ss_dssp EEEE
T ss_pred eeee
Confidence 4443
No 45
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-37 Score=289.12 Aligned_cols=260 Identities=11% Similarity=0.040 Sum_probs=195.5
Q ss_pred cCCCcceeeeeeecCC------CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762 9 DTGHEDMIHDAEMDYL------GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL 82 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~------g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~ 82 (318)
..+|.+.|.+++|+|+ +.+|||++.||+|+|||+..................++.+|.+.|++++|++ +..
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~---~~~ 279 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS---PTT 279 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS---SSE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC---CCe
Confidence 3567889999999997 5799999999999999996321000000000112356889999999999963 358
Q ss_pred EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEE--EeeCCCCC-cEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762 83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI--AWAPKEFG-LILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159 (318)
Q Consensus 83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v--~~~p~~~~-~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~ 159 (318)
||+|+.||+|++||+.++.. +...+.+|...|.+| +|+|+ + .+||+++.|++|+|||++... ....+.+|.
T Consensus 280 lasgs~DgtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~~--g~~~laS~S~D~tvklWD~~~~~---~~~~~~~~~ 353 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSDF--EDTVVSTVAVDGYFYIFNPKDIA---TTKTTVSRF 353 (524)
T ss_dssp EEEEETTSEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCTT--SCCEEEEEETTSEEEEECGGGHH---HHCEEEEEC
T ss_pred EEEEeCCCEEEEEECCCCCC-ceEEeecccccEEEEEEEcCCC--CCeEEEEeccCCeEEEEECCCCC---ccccccccc
Confidence 99999999999999986532 223467899999999 56776 4 789999999999999975432 122344565
Q ss_pred c--ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762 160 I--GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237 (318)
Q Consensus 160 ~--~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~ 237 (318)
. .+.+++|+|+ ++.|++++.|++|+|||++.+.+ ...+.+|...|++|+|+|+ +.
T Consensus 354 ~~~~v~~v~fsp~-----------------~~~l~s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~----g~ 410 (524)
T 2j04_B 354 RGSNLVPVVYCPQ-----------------IYSYIYSDGASSLRAVPSRAAFA--VHPLVSRETTITAIGVSRL----HP 410 (524)
T ss_dssp SCCSCCCEEEETT-----------------TTEEEEECSSSEEEEEETTCTTC--CEEEEECSSCEEEEECCSS----CC
T ss_pred ccCcccceEeCCC-----------------cCeEEEeCCCCcEEEEECccccc--ceeeecCCCceEEEEeCCC----CC
Confidence 3 4789999996 46799999999999999887653 3456789999999999996 78
Q ss_pred EEEEEeCCCeEEEEEcCCCcc---------------e---------------------------eeEEeeecCCcEEEEE
Q psy2762 238 MIASCSQDRKVIIWTSNDYVT---------------W---------------------------TPFIMNTFDDVVWNVS 275 (318)
Q Consensus 238 ~l~s~s~D~~i~vw~~~~~~~---------------~---------------------------~~~~~~~~~~~v~~v~ 275 (318)
+|+|||.|++|+||+...... + ....+.+|..+|++|+
T Consensus 411 ~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Va 490 (524)
T 2j04_B 411 MVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTK 490 (524)
T ss_dssp BCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEE
T ss_pred eEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEE
Confidence 899999999999998533110 0 0112345678899999
Q ss_pred EcCCCC---EEEEEeCCCeEEEEEECCC
Q psy2762 276 WSLTGD---ILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 276 ~spdg~---~l~s~~~D~~v~iW~~~~~ 300 (318)
|+|+++ .||+|+.||+||||++.-.
T Consensus 491 fsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 491 WNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp ECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCCCCCccHHHHhhccCceEEEEEcccc
Confidence 999964 9999999999999997653
No 46
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.6e-36 Score=270.15 Aligned_cols=203 Identities=9% Similarity=0.084 Sum_probs=158.1
Q ss_pred ccCeEEEEecCCCCCcEEEE--EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEe
Q psy2762 66 SGPVWQVAWAHPQFGTLLAS--CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTY 143 (318)
Q Consensus 66 ~~~V~~v~~~~~~~~~~las--~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~ 143 (318)
...+.+++|++ ||++||+ ++.|++|+|||+.+.+.. ..+. |...|.+|+|+|+ +.++++++.++ +++|+.
T Consensus 133 ~~~~~~v~fSp--Dg~~la~as~~~d~~i~iwd~~~~~~~--~~~~-~~~~V~~v~fspd--g~~l~s~s~~~-~~~~~~ 204 (365)
T 4h5i_A 133 DDYTKLVYISR--EGTVAAIASSKVPAIMRIIDPSDLTEK--FEIE-TRGEVKDLHFSTD--GKVVAYITGSS-LEVIST 204 (365)
T ss_dssp TCCEEEEEECT--TSSCEEEEESCSSCEEEEEETTTTEEE--EEEE-CSSCCCEEEECTT--SSEEEEECSSC-EEEEET
T ss_pred ccCEEEEEEcC--CCCEEEEEECCCCCEEEEeECCCCcEE--EEeC-CCCceEEEEEccC--CceEEecccee-EEEEEe
Confidence 34578899974 5888764 557999999999987643 3443 7788999999998 77899988665 455554
Q ss_pred ecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC----eEEEEEccCCeE--EEEEEcc
Q psy2762 144 MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN----LIKIWKQEGDKW--IEETKLE 217 (318)
Q Consensus 144 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~----~i~iwd~~~~~~--~~~~~~~ 217 (318)
..+.. ........|...+..++|+|+ +.++++++.|+ .+++|+...... .+...+.
T Consensus 205 ~~~~~-~~~~~~~~~~~~v~~v~fspd-----------------g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~ 266 (365)
T 4h5i_A 205 VTGSC-IARKTDFDKNWSLSKINFIAD-----------------DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT 266 (365)
T ss_dssp TTCCE-EEEECCCCTTEEEEEEEEEET-----------------TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccCcc-eeeeecCCCCCCEEEEEEcCC-----------------CCEEEEEecCCcceeEEeecccccceecceeeeeec
Confidence 33321 111223468888999999997 57899999887 688999876543 2345678
Q ss_pred cCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
+|...|++++|+|+ +.+||+|+.|++|+|||+.+... ....+.+|..+|++|+|||||++|||+|.|++||||++
T Consensus 267 ~~~~~V~~~~~Spd----g~~lasgs~D~~V~iwd~~~~~~-~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 267 NRFKGITSMDVDMK----GELAVLASNDNSIALVKLKDLSM-SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp SSCSCEEEEEECTT----SCEEEEEETTSCEEEEETTTTEE-EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CCCCCeEeEEECCC----CCceEEEcCCCEEEEEECCCCcE-EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 99999999999996 88999999999999999987542 11234689999999999999999999999999999998
Q ss_pred CC
Q psy2762 298 NT 299 (318)
Q Consensus 298 ~~ 299 (318)
..
T Consensus 342 p~ 343 (365)
T 4h5i_A 342 PL 343 (365)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-34 Score=256.77 Aligned_cols=241 Identities=15% Similarity=0.213 Sum_probs=205.6
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg 90 (318)
+|...|++++|+|++++|++++.|++|++||+... .......+..|...|.+++|++ ++++|++++.|+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~---------~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg 163 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP---------TPRIKAELTSSAPACYALAISP--DSKVCFSCCSDG 163 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------EEEEEEECSSSCEEEEEECT--TSSEEEEEETTS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC---------CcceeeecccCCCceEEEEECC--CCCEEEEEeCCC
Confidence 79999999999999999999999999999999732 2235677889999999999974 589999999999
Q ss_pred eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762 91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG 170 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 170 (318)
.|++||+.+++ ....+..|...|.+++|+|+ +.++++++.|+.|++||+.... ......|..++..++|+|+
T Consensus 164 ~v~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~----~~~~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 164 NIAVWDLHNQT--LVRQFQGHTDGASCIDISND--GTKLWTGGLDNTVRSWDLREGR----QLQQHDFTSQIFSLGYCPT 235 (337)
T ss_dssp CEEEEETTTTE--EEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTE----EEEEEECSSCEEEEEECTT
T ss_pred cEEEEeCCCCc--eeeeeecccCceEEEEECCC--CCEEEEEecCCcEEEEECCCCc----eEeeecCCCceEEEEECCC
Confidence 99999998875 34456789999999999998 6789999999999999974432 2223357778899999997
Q ss_pred CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762 171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v 250 (318)
+.+|++++.|+.|++||+.+++. ..+..|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 236 -----------------~~~l~~~~~~~~i~~~~~~~~~~---~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~~ 291 (337)
T 1gxr_A 236 -----------------GEWLAVGMESSNVEVLHVNKPDK---YQLHLHESCVLSLKFAYC----GKWFVSTGKDNLLNA 291 (337)
T ss_dssp -----------------SSEEEEEETTSCEEEEETTSSCE---EEECCCSSCEEEEEECTT----SSEEEEEETTSEEEE
T ss_pred -----------------CCEEEEEcCCCcEEEEECCCCCe---EEEcCCccceeEEEECCC----CCEEEEecCCCcEEE
Confidence 46899999999999999987753 356789999999999996 789999999999999
Q ss_pred EEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 251 w~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
|++..... .....+...|.+++|+|++++|++++.||.|++|++
T Consensus 292 ~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 292 WRTPYGAS---IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EETTTCCE---EEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EECCCCeE---EEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 99987542 234457889999999999999999999999999986
No 48
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=265.14 Aligned_cols=266 Identities=16% Similarity=0.243 Sum_probs=205.6
Q ss_pred eeecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEE-----ecccccCeEEEEecCCCC
Q psy2762 6 NLVDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE-----LKGHSGPVWQVAWAHPQF 79 (318)
Q Consensus 6 ~~~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~-----~~~h~~~V~~v~~~~~~~ 79 (318)
..+..+|.+.|++++|+| ++++|++|+.||+|+|||+......... ....... ..+|.+.|.+++|++ .+
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 111 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYY---TCKAVCSIGRDHPDVHRYSVETVQWYP-HD 111 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCE---EECEEEEECTTCTTCCSSCEEEEEECT-TC
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceE---eccccccccccccccCCCcEEEEEEcc-CC
Confidence 346678999999999999 9999999999999999999743110000 0000111 136999999999974 35
Q ss_pred CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCC-CCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762 80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE-FGLILACGSSDGTISFLTYMSDTNSWESRKIAAH 158 (318)
Q Consensus 80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h 158 (318)
+.+|++++.|+.|++||+.+++...... +...+.++.++|.. .+.++++++.|+.|++|++.... ....+..|
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~~~ 185 (408)
T 4a11_B 112 TGMFTSSSFDKTLKVWDTNTLQTADVFN---FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS---CSHILQGH 185 (408)
T ss_dssp TTCEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC---CCEEECCC
T ss_pred CcEEEEEeCCCeEEEeeCCCCccceecc---CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc---eeeeecCC
Confidence 7899999999999999999876544332 67889999999863 24589999999999999985543 24456689
Q ss_pred ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc---------------ccCCCCe
Q psy2762 159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL---------------ENHSDWV 223 (318)
Q Consensus 159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~---------------~~h~~~V 223 (318)
..++.+++|+|+. ...|++++.|+.|++||++.+.. ....+ .+|...|
T Consensus 186 ~~~v~~~~~~~~~----------------~~ll~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 186 RQEILAVSWSPRY----------------DYILATASADSRVKLWDVRRASG-CLITLDQHNGKKSQAVESANTAHNGKV 248 (408)
T ss_dssp CSCEEEEEECSSC----------------TTEEEEEETTSCEEEEETTCSSC-CSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred CCcEEEEEECCCC----------------CcEEEEEcCCCcEEEEECCCCCc-ccccccccccccceeeccccccccCce
Confidence 9999999999973 12589999999999999876531 11222 5789999
Q ss_pred eEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc---------------------------------------------
Q psy2762 224 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT--------------------------------------------- 258 (318)
Q Consensus 224 ~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~--------------------------------------------- 258 (318)
++++|+|+ +.+|++++.|+.|++|++.....
T Consensus 249 ~~~~~~~~----~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 249 NGLCFTSD----GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp EEEEECTT----SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred eEEEEcCC----CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 99999996 88999999999999999876321
Q ss_pred eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 259 WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 259 ~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
.....+.+|...|.+++|+|+|++|++++.||.|++|+.+....
T Consensus 325 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 325 EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 11223456788999999999999999999999999999987644
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.4e-35 Score=267.85 Aligned_cols=265 Identities=15% Similarity=0.105 Sum_probs=201.1
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
.+| ..+....|+|++++|++|+.|++|+|||+. .+.....+.+|.+.|++++|++ ++++|++|+.|
T Consensus 95 ~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-----------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~d 160 (420)
T 3vl1_A 95 KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSN-----------FNLQREIDQAHVSEITKLKFFP--SGEALISSSQD 160 (420)
T ss_dssp CSC-CEEEEEEECSSSCEEEEEETTSCEEEECTT-----------SCEEEEETTSSSSCEEEEEECT--TSSEEEEEETT
T ss_pred ecC-CceEEEEEecCCCEEEEEECCCCEEEEeCC-----------CcceeeecccccCccEEEEECC--CCCEEEEEeCC
Confidence 344 455566789999999999999999999986 3466777889999999999974 58999999999
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec---ccccccceee
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA---AHTIGCNAVS 166 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~---~h~~~v~~~~ 166 (318)
++|++||+.+++.. ..+.+|...|.+++|+|+ +.++++++.|+.|++||+.... ....+. .|..++..+.
T Consensus 161 ~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~v~~~~ 233 (420)
T 3vl1_A 161 MQLKIWSVKDGSNP--RTLIGHRATVTDIAIIDR--GRNVLSASLDGTIRLWECGTGT---TIHTFNRKENPHDGVNSIA 233 (420)
T ss_dssp SEEEEEETTTCCCC--EEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEETTTTE---EEEEECBTTBTTCCEEEEE
T ss_pred CeEEEEeCCCCcCc--eEEcCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEeECCCCc---eeEEeecCCCCCCCccEEE
Confidence 99999999877643 346689999999999998 6789999999999999975442 222333 3555666666
Q ss_pred eCCCCCCCccc----cccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc-EEEE
Q psy2762 167 WGPGIGSLSEL----DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIAS 241 (318)
Q Consensus 167 ~~p~~~~~~~~----~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s 241 (318)
|.|........ ....-.+...+.+|++|+.|+.|++||+.+++... ....+|...|++++|+|+ +. +|++
T Consensus 234 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~~~~----~~~~l~~ 308 (420)
T 3vl1_A 234 LFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI-QLPSKFTCSCNSLTVDGN----NANYIYA 308 (420)
T ss_dssp EEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE-EECCTTSSCEEEEEECSS----CTTEEEE
T ss_pred EecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeE-EcccccCCCceeEEEeCC----CCCEEEE
Confidence 65542211000 00011122236789999999999999998876432 334578899999999996 55 9999
Q ss_pred EeCCCeEEEEEcCCCcceeeEEeee-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 242 CSQDRKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 242 ~s~D~~i~vw~~~~~~~~~~~~~~~-~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
++.|+.|++||+...... ...+.. +...|..+.| |++++|++++.|++|++|++....+
T Consensus 309 g~~dg~i~vwd~~~~~~~-~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 309 GYENGMLAQWDLRSPECP-VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp EETTSEEEEEETTCTTSC-SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTC
T ss_pred EeCCCeEEEEEcCCCcCc-hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCC
Confidence 999999999999875421 233444 6678888855 5888999999999999999887543
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=286.03 Aligned_cols=251 Identities=11% Similarity=0.105 Sum_probs=190.4
Q ss_pred CcceeeeeeecCCC---------CEEEE-------------------eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec
Q psy2762 12 HEDMIHDAEMDYLG---------LYLAT-------------------CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63 (318)
Q Consensus 12 H~~~v~~~~~~~~g---------~~l~s-------------------~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 63 (318)
+.+.|.+++|+|++ ++||+ ++.|++|+|||+.... .......++.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~-------~~~~~~~~l~ 204 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTST-------LHCVKVQTIV 204 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTT-------CCEEEEEEEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCC-------CCceEEEEEE
Confidence 46788888888876 55555 6688999999986320 0111234577
Q ss_pred ccccCeEEEEecCC----CCCcEEEEEECCCeEEEEeCCCCcEE---------EEEEecCCCcCeEEEEeeCCCCCcEEE
Q psy2762 64 GHSGPVWQVAWAHP----QFGTLLASCSYDRKVIIWRGDNGNWF---------KYYEYNNHDSSVNSIAWAPKEFGLILA 130 (318)
Q Consensus 64 ~h~~~V~~v~~~~~----~~~~~las~s~Dg~v~vWd~~~~~~~---------~~~~~~~h~~~v~~v~~~p~~~~~~la 130 (318)
+|.+.|++++|++. .++.+|||++.||+|+|||+..+... +...+.+|...|.+++|+|+ + .|+
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~-~la 281 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--T-TVV 281 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--S-EEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--C-eEE
Confidence 88999999999753 13679999999999999998765311 12356789999999999985 3 699
Q ss_pred EeecCCeEEEEEeecCCCCcceeeeccccccccee--eeCCCCCCCccccccCCCCCCcc-ceEEEecCCCeEEEEEccC
Q psy2762 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV--SWGPGIGSLSELDLKGSKLGGVA-KRLVSGGCDNLIKIWKQEG 207 (318)
Q Consensus 131 sgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~--~~~p~~~~~~~~~~~~~~~~~~~-~~lasgs~d~~i~iwd~~~ 207 (318)
+|+.||+|++||+..... ....+.+|..+|.++ +|+|+ + ++|||||.|++|||||+++
T Consensus 282 sgs~DgtV~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~-----------------g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDF-----------------EDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp EEETTSEEEEEETTBCSS--CSEEEECSSSCEEEEEEECCTT-----------------SCCEEEEEETTSEEEEECGGG
T ss_pred EEeCCCEEEEEECCCCCC--ceEEeecccccEEEEEEEcCCC-----------------CCeEEEEeccCCeEEEEECCC
Confidence 999999999999854321 223466899999998 56764 3 5799999999999999886
Q ss_pred CeEEEEEEcccCCC--CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEE
Q psy2762 208 DKWIEETKLENHSD--WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTV 285 (318)
Q Consensus 208 ~~~~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s 285 (318)
+++. ..+.+|.. .|.+|+|+|+ +..|++++.|++|++||+..... ...+.+|.+.|++|+|||+|++|+|
T Consensus 343 ~~~~--~~~~~~~~~~~v~~v~fsp~----~~~l~s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 343 IATT--KTTVSRFRGSNLVPVVYCPQ----IYSYIYSDGASSLRAVPSRAAFA--VHPLVSRETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp HHHH--CEEEEECSCCSCCCEEEETT----TTEEEEECSSSEEEEEETTCTTC--CEEEEECSSCEEEEECCSSCCBCEE
T ss_pred CCcc--cccccccccCcccceEeCCC----cCeEEEeCCCCcEEEEECccccc--ceeeecCCCceEEEEeCCCCCeEEE
Confidence 5432 23345543 4889999996 67899999999999999887542 3446689999999999999999999
Q ss_pred EeCCCeEEEEEECC
Q psy2762 286 SCGDNSVSLWKENT 299 (318)
Q Consensus 286 ~~~D~~v~iW~~~~ 299 (318)
|+.|++|+||+...
T Consensus 415 gs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 415 GSADGSLIITNAAR 428 (524)
T ss_dssp EETTTEEECCBSCS
T ss_pred EECCCEEEEEechH
Confidence 99999999998643
No 51
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=263.70 Aligned_cols=218 Identities=25% Similarity=0.496 Sum_probs=182.1
Q ss_pred ceEEEEeccccc-CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEE-ecCCCcCeEEEEeeCCCCCcEEEEee
Q psy2762 56 GTLIAELKGHSG-PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE-YNNHDSSVNSIAWAPKEFGLILACGS 133 (318)
Q Consensus 56 ~~~~~~~~~h~~-~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~lasgs 133 (318)
..++.++++|.+ .|++++|++ ++++||+|+.|++|+|||+.++....... ..+|...|.+++|+|+ +.+|++|+
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp--~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~--g~~l~s~s 80 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNP--AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC--GNYLASAS 80 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECT--TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT--SSEEEEEE
T ss_pred EEEeeeecCCCCCcEEEEEECC--CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC--CCEEEEEE
Confidence 357889999998 999999974 59999999999999999998775443333 3679999999999998 77999999
Q ss_pred cCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe-EEE
Q psy2762 134 SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-WIE 212 (318)
Q Consensus 134 ~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~-~~~ 212 (318)
.|++|++|+...... .....+.+|..+|.+++|+|+ +.+|++|+.|++|+|||+..+. ...
T Consensus 81 ~D~~v~iw~~~~~~~-~~~~~~~~h~~~v~~v~~sp~-----------------~~~l~s~s~D~~v~iwd~~~~~~~~~ 142 (345)
T 3fm0_A 81 FDATTCIWKKNQDDF-ECVTTLEGHENEVKSVAWAPS-----------------GNLLATCSRDKSVWVWEVDEEDEYEC 142 (345)
T ss_dssp TTSCEEEEEECCC-E-EEEEEECCCSSCEEEEEECTT-----------------SSEEEEEETTSCEEEEEECTTSCEEE
T ss_pred CCCcEEEEEccCCCe-EEEEEccCCCCCceEEEEeCC-----------------CCEEEEEECCCeEEEEECCCCCCeEE
Confidence 999999999754321 123456789999999999997 4789999999999999987653 233
Q ss_pred EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy2762 213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292 (318)
Q Consensus 213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v 292 (318)
...+.+|...|++++|+|+ +.+|++++.|++|++|+...........+.+|...|++++|+|+|++|++++.|++|
T Consensus 143 ~~~~~~h~~~v~~~~~~p~----~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v 218 (345)
T 3fm0_A 143 VSVLNSHTQDVKHVVWHPS----QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV 218 (345)
T ss_dssp EEEECCCCSCEEEEEECSS----SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEecCcCCCeEEEEECCC----CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeE
Confidence 5567899999999999996 789999999999999998764322234567889999999999999999999999999
Q ss_pred EEEEECC
Q psy2762 293 SLWKENT 299 (318)
Q Consensus 293 ~iW~~~~ 299 (318)
+||+...
T Consensus 219 ~iW~~~~ 225 (345)
T 3fm0_A 219 RIWRQYL 225 (345)
T ss_dssp EEEEEEC
T ss_pred EEecccc
Confidence 9999743
No 52
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.1e-35 Score=265.96 Aligned_cols=262 Identities=13% Similarity=0.145 Sum_probs=207.7
Q ss_pred eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCC----C-
Q psy2762 6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQF----G- 80 (318)
Q Consensus 6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~----~- 80 (318)
.....+|.+.|++++|+| ++|++|+.||+|+|||+..... ......+..+.+|...|++++|++ + +
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~g~ 79 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN-----ENPKDKSYSHFVHKSGLHHVDVLQ--AIERDAF 79 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTT-----CCGGGGEEEEECCTTCEEEEEEEE--EEETTTE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccc-----ccCCCcceEEecCCCcEEEEEEec--ccccCCc
Confidence 446689999999999999 8999999999999999973210 001224677889999999999973 4 7
Q ss_pred --cEEEEEECCCeEEEEeCCCCcE---EEEEEecCC-----CcCeEEEEee----CCCCCcE-EEEeecCCeEEEEEeec
Q psy2762 81 --TLLASCSYDRKVIIWRGDNGNW---FKYYEYNNH-----DSSVNSIAWA----PKEFGLI-LACGSSDGTISFLTYMS 145 (318)
Q Consensus 81 --~~las~s~Dg~v~vWd~~~~~~---~~~~~~~~h-----~~~v~~v~~~----p~~~~~~-lasgs~d~~i~i~~~~~ 145 (318)
.+|++++.|+.|++||+.++.. .....+..| ...|.+++|+ |+ +.+ +++++.|+.|++|++..
T Consensus 80 ~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 80 ELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL--LSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp EEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC------CEEEEEEETTSCEEEEEEES
T ss_pred cccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC--CceEEEEEeCCCcEEEEeCCc
Confidence 8999999999999999876652 113445667 5899999999 87 667 99999999999999876
Q ss_pred ------CCCCc-ce-eee-------cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE
Q psy2762 146 ------DTNSW-ES-RKI-------AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW 210 (318)
Q Consensus 146 ------~~~~~-~~-~~~-------~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~ 210 (318)
..... .. ..+ ..|...+.+++|+|+ + +|++++.|+.|++||+.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------~-~l~~~~~dg~i~i~d~~~~~~ 219 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER-----------------G-LIATGFNNGTVQISELSTLRP 219 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT-----------------S-EEEEECTTSEEEEEETTTTEE
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCC-----------------c-eEEEEeCCCcEEEEECCCCce
Confidence 32111 00 033 347888999999996 6 899999999999999988754
Q ss_pred EEEEEccc---C---CCCeeEEEEccCCCCCccEEEEEeCC---CeEEEEEcCCCcceeeEEeee-------------cC
Q psy2762 211 IEETKLEN---H---SDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFIMNT-------------FD 268 (318)
Q Consensus 211 ~~~~~~~~---h---~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~vw~~~~~~~~~~~~~~~-------------~~ 268 (318)
...+.. | ...|++++|+|+ +.+|++++.| +.|++||+.... ....+.. |.
T Consensus 220 --~~~~~~~~~h~~~~~~i~~i~~~~~----~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 220 --LYNFESQHSMINNSNSIRSVKFSPQ----GSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp --EEEEECCC---CCCCCEEEEEECSS----TTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC--------CCBSBS
T ss_pred --eEEEeccccccccCCccceEEECCC----CCEEEEEecCCCCceEEEEECCCCc--ccceeccCcccccccccccccC
Confidence 345566 8 999999999996 7899999999 999999997654 2344555 88
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762 269 DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304 (318)
Q Consensus 269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~ 304 (318)
..|.+++|+|++++|++++.|+.|+|||+..+....
T Consensus 292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT 327 (397)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeE
Confidence 999999999999999999999999999987764333
No 53
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=272.85 Aligned_cols=266 Identities=15% Similarity=0.213 Sum_probs=198.1
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc------------cCeEEEEecCCC
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS------------GPVWQVAWAHPQ 78 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~------------~~V~~v~~~~~~ 78 (318)
.|.+.|++++|+|+|++||+|+.||+|+|||+...............++..+.+|. +.|++++|++..
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 46899999999999999999999999999999743111111112234678899998 889999997532
Q ss_pred CCcEEEEEECCCeEEEEeCCCCcEE-------------------------------------EEEE-ecCCCcCeEEEEe
Q psy2762 79 FGTLLASCSYDRKVIIWRGDNGNWF-------------------------------------KYYE-YNNHDSSVNSIAW 120 (318)
Q Consensus 79 ~~~~las~s~Dg~v~vWd~~~~~~~-------------------------------------~~~~-~~~h~~~v~~v~~ 120 (318)
+..+|++++.|++|++||+..+... +... ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 2279999999999999998653221 0112 3579999999999
Q ss_pred eCCCCCcEEEEeecCCeEEEEEeecCCCCcce-----eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec
Q psy2762 121 APKEFGLILACGSSDGTISFLTYMSDTNSWES-----RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG 195 (318)
Q Consensus 121 ~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~-----~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs 195 (318)
+|+ +.++++| .|+.|++||+......... ..+.+|...+.+++|+|+. ..+|++|+
T Consensus 186 ~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~----------------~~~l~s~~ 246 (447)
T 3dw8_B 186 NSD--YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNS----------------CNTFVYSS 246 (447)
T ss_dssp CTT--SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSC----------------TTEEEEEE
T ss_pred cCC--CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCC----------------CcEEEEEe
Confidence 998 6788888 7999999997422211110 1245889999999999962 16899999
Q ss_pred CCCeEEEEEccCCeEE--EEEEcccCCC------------CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC-Cccee
Q psy2762 196 CDNLIKIWKQEGDKWI--EETKLENHSD------------WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND-YVTWT 260 (318)
Q Consensus 196 ~d~~i~iwd~~~~~~~--~~~~~~~h~~------------~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~-~~~~~ 260 (318)
.|++|+|||+.+++.. ....+.+|.. .|.+++|+|+ +.+|++++. +.|+|||+.. ...
T Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----g~~l~~~~~-~~v~iwd~~~~~~~-- 319 (447)
T 3dw8_B 247 SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS----GRYMMTRDY-LSVKVWDLNMENRP-- 319 (447)
T ss_dssp TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTT----SSEEEEEES-SEEEEEETTCCSSC--
T ss_pred CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCC----CCEEEEeeC-CeEEEEeCCCCccc--
Confidence 9999999998876521 0345667765 8999999996 889999999 9999999975 321
Q ss_pred eEEeeecCCc---------------EEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 261 PFIMNTFDDV---------------VWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 261 ~~~~~~~~~~---------------v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
...+..|... +.+++|+|+|++|++++.||.|+|||+..+..
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 320 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 2223334321 33599999999999999999999999877543
No 54
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.6e-34 Score=251.62 Aligned_cols=250 Identities=19% Similarity=0.327 Sum_probs=203.0
Q ss_pred cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
..+|...|++++|+|+|++|++|+.|++|+|||+. .++.+.++.+|...+.++.+. +..|++++.
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~-----------~~~~~~~~~~h~~~~~~~~~~----~~~l~s~~~ 127 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-----------QQKRLRNMTSHSARVGSLSWN----SYILSSGSR 127 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCSSCEEEEEEE----TTEEEEEET
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC-----------CceeEEEecCccceEEEeecC----CCEEEEEec
Confidence 35789999999999999999999999999999997 457889999999999888763 689999999
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-eeeecccccccceeee
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSW 167 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-~~~~~~h~~~v~~~~~ 167 (318)
++.+++|+...... ....+.+|...+.+++++++ +.++++++.|++|++||......... ......|...+..+.+
T Consensus 128 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 204 (318)
T 4ggc_A 128 SGHIHHHDVRVAEH-HVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 204 (318)
T ss_dssp TSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEE
T ss_pred CCceEeeecCCCce-eEEEEcCccCceEEEEEcCC--CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEe
Confidence 99999999876542 44456789999999999998 67899999999999999865442211 2233467778888999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE--eCC
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC--SQD 245 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~--s~D 245 (318)
+|.... ...+++++.+++|++||........ ...+...+..+.|+|. +..++++ +.|
T Consensus 205 ~~~~~~--------------~~~~~~~~~~~~i~lwd~~~~~~~~---~~~~~~~v~~~~~~~~----~~~~~~~sg~~d 263 (318)
T 4ggc_A 205 CPWQSN--------------VLATGGGTSDRHIRIWNVCSGACLS---AVDAHSQVCSILWSPH----YKELISGHGFAQ 263 (318)
T ss_dssp CTTSTT--------------EEEEEECTTTCEEEEEETTTCCEEE---EEECSSCEEEEEEETT----TTEEEEEECTTT
T ss_pred cCCCCc--------------EEEEEecCCCCEEEEEecccccccc---cccceeeeeeeeeccc----ccceEEEEEcCC
Confidence 886421 1346788999999999988765432 2356777999999996 4455544 489
Q ss_pred CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
++|+|||+.+.. ....+.+|.+.|.+++|+|||++|+|++.|++|||||+..
T Consensus 264 ~~i~iwd~~~~~--~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 264 NQLVIWKYPTMA--KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 999999998754 3456778999999999999999999999999999999754
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.6e-35 Score=288.19 Aligned_cols=257 Identities=16% Similarity=0.210 Sum_probs=216.2
Q ss_pred cceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL 83 (318)
Q Consensus 4 ~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l 83 (318)
.+.+.+.+|.+.|.+++|+|+|++|++|+.||+|+|||+. .+..+..+.+|.+.|.+++|++ ++++|
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~-----------~~~~~~~~~~~~~~v~~~~~s~--~~~~l 70 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYE-----------TQVEVRSIQVTETPVRAGKFIA--RKNWI 70 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCSSCEEEEEEEG--GGTEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECC-----------CCceEEEEecCCCcEEEEEEeC--CCCEE
Confidence 3455678999999999999999999999999999999986 3577889999999999999974 58999
Q ss_pred EEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762 84 ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN 163 (318)
Q Consensus 84 as~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~ 163 (318)
++++.||.|+|||+.+++. ...+.+|...|.+++|+|+ +.++++++.|+.|++|++..+. .....+.+|..++.
T Consensus 71 ~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~~v~ 144 (814)
T 3mkq_A 71 IVGSDDFRIRVFNYNTGEK--VVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVM 144 (814)
T ss_dssp EEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECSS--SSEEEEEETTSEEEEEEGGGTS--EEEEEEECCSSCEE
T ss_pred EEEeCCCeEEEEECCCCcE--EEEEecCCCCEEEEEEeCC--CCEEEEEcCCCEEEEEECCCCc--eEEEEEcCCCCcEE
Confidence 9999999999999988864 3456789999999999998 6789999999999999985432 22345568999999
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc-ccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASC 242 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~~~l~s~ 242 (318)
+++|+|.. +..|++++.|++|++||+..+... ..+ ..|...|.+++|+|. .++.+|+++
T Consensus 145 ~~~~~p~~----------------~~~l~~~~~dg~v~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~--~~~~~l~~~ 204 (814)
T 3mkq_A 145 CVAFNPKD----------------PSTFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPL--PDKPYMITA 204 (814)
T ss_dssp EEEEETTE----------------EEEEEEEETTSEEEEEETTCSSCS--EEEECCCTTCCCEEEECCS--TTCCEEEEE
T ss_pred EEEEEcCC----------------CCEEEEEeCCCeEEEEECCCCcce--eEEecCCCCCEEEEEEEEC--CCCCEEEEE
Confidence 99999931 468999999999999998766432 223 344588999999993 137899999
Q ss_pred eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
+.|++|++|+..... ....+..|...|.+++|+|+|++|++++.||+|++|+...+.
T Consensus 205 ~~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 205 SDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp CTTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred eCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 999999999987653 344566788899999999999999999999999999977653
No 56
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.7e-35 Score=272.94 Aligned_cols=268 Identities=21% Similarity=0.353 Sum_probs=210.6
Q ss_pred ecCCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc-EEEE
Q psy2762 8 VDTGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT-LLAS 85 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~-~las 85 (318)
...+|.+.|++++|+|+ +.+|++++.||+|+|||+........ .......+..+.+|.+.|++++|++. +. +|++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s 199 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-PSGECQPDLRLRGHQKEGYGLSWNPN--LNGYLLS 199 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-TTCCCCCSEEEECCSSCCCCEEECTT--STTEEEE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-ccccCCCcEEecCCCCCeEEEEeCCC--CCCeEEE
Confidence 34579999999999997 78999999999999999963211100 00113456788899999999999743 55 9999
Q ss_pred EECCCeEEEEeCCCCc----E-EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc
Q psy2762 86 CSYDRKVIIWRGDNGN----W-FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI 160 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~~~----~-~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~ 160 (318)
|+.||+|++||+..+. . .....+.+|...|.+++|+|++ +.++++++.|+.|++||++..........+..|..
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH-ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC-CCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 9999999999997632 1 1133456899999999999954 57899999999999999865432223345568999
Q ss_pred ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762 161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240 (318)
Q Consensus 161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 240 (318)
+++.++|+|+. ...|++|+.|+.|+|||++... .....+.+|...|.+++|+|+ ...+|+
T Consensus 279 ~v~~i~~~p~~----------------~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~---~~~~l~ 338 (430)
T 2xyi_A 279 EVNCLSFNPYS----------------EFILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPH---NETILA 338 (430)
T ss_dssp CEEEEEECSSC----------------TTEEEEEETTSEEEEEETTCTT-SCSEEEECCSSCEEEEEECSS---CTTEEE
T ss_pred CeEEEEeCCCC----------------CCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCC---CCCEEE
Confidence 99999999963 2369999999999999988632 134567789999999999997 346899
Q ss_pred EEeCCCeEEEEEcCCCcc------------eeeEEeeecCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEECC
Q psy2762 241 SCSQDRKVIIWTSNDYVT------------WTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 241 s~s~D~~i~vw~~~~~~~------------~~~~~~~~~~~~v~~v~~spdg~-~l~s~~~D~~v~iW~~~~ 299 (318)
+++.|+.|+||++..... .......+|...|.+++|+|+++ +|++++.||.|+||++..
T Consensus 339 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 339 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 999999999999876221 12334456788999999999999 899999999999999765
No 57
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=262.71 Aligned_cols=256 Identities=13% Similarity=0.145 Sum_probs=201.0
Q ss_pred cCCCcceeeeeeecCC---CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC----CCCCc
Q psy2762 9 DTGHEDMIHDAEMDYL---GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH----PQFGT 81 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~---g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~----~~~~~ 81 (318)
..+|...|++++|+|+ |++|++|+.|++|++||+... ...+..+.+|.+.|.++.|.+ ..+++
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~ 130 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAP----------EMPVYSVKGHKEIINAIDGIGGLGIGEGAP 130 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSC----------SSCSEEECCCSSCEEEEEEESGGGCC-CCC
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCC----------CccEEEEEecccceEEEeeccccccCCCcc
Confidence 3479999999999998 799999999999999999732 125677889999999997642 13588
Q ss_pred EEEEEECCCeEEEEeCCCCc-EEEEEEecCCC----cCeEEEE----eeCCCCCcEEEEeecCCeEEEEEeecCCCCcce
Q psy2762 82 LLASCSYDRKVIIWRGDNGN-WFKYYEYNNHD----SSVNSIA----WAPKEFGLILACGSSDGTISFLTYMSDTNSWES 152 (318)
Q Consensus 82 ~las~s~Dg~v~vWd~~~~~-~~~~~~~~~h~----~~v~~v~----~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~ 152 (318)
+|++++.|++|++||+.++. ... .+..|. ..+.+++ |+|+ +.++++++.|+.|++||+.... .
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~----~ 202 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVA--NMEPVQGENKRDCWTVAFGNAYNQE--ERVVCAGYDNGDIKLFDLRNMA----L 202 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSE--EECCCTTSCCCCEEEEEEECCCC-C--CCEEEEEETTSEEEEEETTTTE----E
T ss_pred EEEEEeCCCeEEEEeCCCCCCcce--eccccCCCCCCceEEEEEEeccCCC--CCEEEEEccCCeEEEEECccCc----e
Confidence 99999999999999998764 223 233333 3799998 6777 6789999999999999974432 3
Q ss_pred eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE---EEEEcccCCCCeeEEEEc
Q psy2762 153 RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI---EETKLENHSDWVRDVAWA 229 (318)
Q Consensus 153 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~---~~~~~~~h~~~V~~v~~s 229 (318)
.....|...+..+.|+|... .+.+|++++.|+.|++||+.+++.. ....+.+|...|++++|+
T Consensus 203 ~~~~~~~~~v~~~~~~~~~~--------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 268 (357)
T 3i2n_A 203 RWETNIKNGVCSLEFDRKDI--------------SMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL 268 (357)
T ss_dssp EEEEECSSCEEEEEESCSSS--------------SCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE
T ss_pred eeecCCCCceEEEEcCCCCC--------------CCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC
Confidence 34457888999999999210 0468999999999999998764321 122345899999999999
Q ss_pred cCCCCCcc-EEEEEeCCCeEEEEEcCCCcce-----------------eeEEeeecCCcEEEEEEcCCCCEEE-EEeCCC
Q psy2762 230 PSWGLSKC-MIASCSQDRKVIIWTSNDYVTW-----------------TPFIMNTFDDVVWNVSWSLTGDILT-VSCGDN 290 (318)
Q Consensus 230 p~~~~~~~-~l~s~s~D~~i~vw~~~~~~~~-----------------~~~~~~~~~~~v~~v~~spdg~~l~-s~~~D~ 290 (318)
|+ +. +|++++.|+.|++|++...... ....+..|...|.+++|+|+|++|+ +++.|+
T Consensus 269 ~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~ 344 (357)
T 3i2n_A 269 PQ----NRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQ 344 (357)
T ss_dssp TT----EEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred CC----CCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCC
Confidence 96 66 8999999999999998753211 2334567889999999999999998 899999
Q ss_pred eEEEEEECCC
Q psy2762 291 SVSLWKENTD 300 (318)
Q Consensus 291 ~v~iW~~~~~ 300 (318)
.|+||++...
T Consensus 345 ~i~iw~~~~~ 354 (357)
T 3i2n_A 345 TVRVLIVTKL 354 (357)
T ss_dssp EEEEEEECC-
T ss_pred cEEEEECCCc
Confidence 9999998764
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-35 Score=270.70 Aligned_cols=268 Identities=14% Similarity=0.129 Sum_probs=203.0
Q ss_pred ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~ 86 (318)
+..+|.+.|++++|+| ++++|++|+.||+|+|||+...... ........+ +|.+.|++++|++ ++.+|++|
T Consensus 58 ~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~-----~~~~~~~~~-~h~~~v~~~~~~~--~~~~l~s~ 129 (437)
T 3gre_A 58 LMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG-----EVYSSSLTY-DCSSTVTQITMIP--NFDAFAVS 129 (437)
T ss_dssp ECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT-----CCCSCSEEE-ECSSCEEEEEECT--TSSEEEEE
T ss_pred eccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC-----cccceeeec-cCCCCEEEEEEeC--CCCEEEEE
Confidence 4479999999999999 9999999999999999998631000 001112223 5999999999973 58999999
Q ss_pred ECCCeEEEEeCC---CCcEEEE--------EEecC--CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762 87 SYDRKVIIWRGD---NGNWFKY--------YEYNN--HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR 153 (318)
Q Consensus 87 s~Dg~v~vWd~~---~~~~~~~--------~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~ 153 (318)
+.||+|++||+. .++.... ..+.. +...+.++.+.....+.++++++.|+.|++||+.... ...
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~ 206 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE---RLQ 206 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC---EEE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe---eeE
Confidence 999999999984 3332221 11222 4566777774422227899999999999999985443 344
Q ss_pred eecc--cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccC
Q psy2762 154 KIAA--HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPS 231 (318)
Q Consensus 154 ~~~~--h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~ 231 (318)
.+.. |...+.+++|+|+ +.+|++|+.|++|+|||++.+++.....+ .|...|++++|+|.
T Consensus 207 ~~~~~~h~~~v~~~~~s~~-----------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEE-----------------CCVLILGTTRGIIDIWDIRFNVLIRSWSF-GDHAPITHVEVCQF 268 (437)
T ss_dssp EEECCGGGCCEEEEEECTT-----------------SCEEEEEETTSCEEEEETTTTEEEEEEBC-TTCEEEEEEEECTT
T ss_pred EEccCCCCCceEEEEECCC-----------------CCEEEEEcCCCeEEEEEcCCccEEEEEec-CCCCceEEEEeccc
Confidence 5555 8899999999997 47899999999999999988765433222 67778999999998
Q ss_pred CCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee------------------------e--cCCcEEEEEEcCCCCEEEE
Q psy2762 232 WGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN------------------------T--FDDVVWNVSWSLTGDILTV 285 (318)
Q Consensus 232 ~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~------------------------~--~~~~v~~v~~spdg~~l~s 285 (318)
++.++.+|++++.|++|+|||+...... ..+. + |...|.+++|+ ++++|++
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s 345 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQ--YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLT 345 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEE--EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEE
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEE--EEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEe
Confidence 7778899999999999999999865421 1111 1 55678899999 7899999
Q ss_pred EeCCCeEEEEEECCCCceEEEe
Q psy2762 286 SCGDNSVSLWKENTDGAWQCIT 307 (318)
Q Consensus 286 ~~~D~~v~iW~~~~~~~~~~~~ 307 (318)
++.|+.|++||+..+.....+.
T Consensus 346 ~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 346 DEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp EGGGTEEEEEETTCGGGCEEEE
T ss_pred cCCCCeEEEEECCCcccceEEe
Confidence 9999999999988765554443
No 59
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-36 Score=272.15 Aligned_cols=258 Identities=14% Similarity=0.231 Sum_probs=209.7
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
.+|...|++++|+|++++|++|+.|++|+|||+.... .....+..+.+|.+.|++++|++ ..+.+|++++.|
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~-------~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~d 135 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEAN-------NAINSMARFSNHSSSVKTVKFNA-KQDNVLASGGNN 135 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTT-------SCCCEEEECCCSSSCCCEEEECS-SSTTBEEEECSS
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeeccccc-------ccccchhhccCCccceEEEEEcC-CCCCEEEEEcCC
Confidence 4689999999999999999999999999999996310 11246788999999999999964 347899999999
Q ss_pred CeEEEEeCCCCc------EE-EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc----
Q psy2762 90 RKVIIWRGDNGN------WF-KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH---- 158 (318)
Q Consensus 90 g~v~vWd~~~~~------~~-~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h---- 158 (318)
++|++||+.+.. .. ....+..|...|.+++|+|+. +.++++++.|+.|++||+.... ....+..|
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~~ 211 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL-AHVFASAGSSNFASIWDLKAKK---EVIHLSYTSPNS 211 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC-TTEEEEESSSSCEEEEETTTTE---EEEEECCCCCSS
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCC-CcEEEEEcCCCCEEEEECCCCC---cceEEecccccc
Confidence 999999998764 11 112235688999999999974 4689999999999999975432 23333333
Q ss_pred --ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC---eEEEEEccCCeEEEEEEcc-cCCCCeeEEEEccCC
Q psy2762 159 --TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN---LIKIWKQEGDKWIEETKLE-NHSDWVRDVAWAPSW 232 (318)
Q Consensus 159 --~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~---~i~iwd~~~~~~~~~~~~~-~h~~~V~~v~~sp~~ 232 (318)
...+.+++|+|+. ..+|++++.|+ .|++||+..+.. ....+. +|...|++++|+|.
T Consensus 212 ~~~~~v~~~~~~~~~----------------~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~- 273 (416)
T 2pm9_A 212 GIKQQLSVVEWHPKN----------------STRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQ- 273 (416)
T ss_dssp CCCCCEEEEEECSSC----------------TTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSS-
T ss_pred ccCCceEEEEECCCC----------------CCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCC-
Confidence 6789999999963 25799999999 999999887521 234566 89999999999993
Q ss_pred CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCCC
Q psy2762 233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~~ 301 (318)
++.+|++++.|++|++|++.... ....+..|...|.+++|+|++ ++|++++.|+.|+||++....
T Consensus 274 --~~~~l~s~~~dg~v~~wd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 274 --DEHLLLSSGRDNTVLLWNPESAE--QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp --CSSCEEEEESSSEEEEECSSSCC--EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred --CCCeEEEEeCCCCEEEeeCCCCc--cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 37899999999999999987754 344566788999999999999 899999999999999987754
No 60
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-34 Score=257.68 Aligned_cols=251 Identities=16% Similarity=0.123 Sum_probs=202.6
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc-EEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT-LLASC 86 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~-~las~ 86 (318)
+..+|.+.|++++|+|++++|++++.|++|+|||+... ........+.+|...|.+++|++ +++ +|++|
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~ 75 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQ--------AKNVDLLQSLRYKHPLLCCNFID--NTDLQIYVG 75 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETT--------TTEEEEEEEEECSSCEEEEEEEE--SSSEEEEEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCC--------CccccceeeeecCCceEEEEECC--CCCcEEEEE
Confidence 45689999999999999999999999999999999732 11223556668999999999974 488 99999
Q ss_pred ECCCeEEEEeC-CCCcEEEEEEecC--CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec---------CCCCcceee
Q psy2762 87 SYDRKVIIWRG-DNGNWFKYYEYNN--HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS---------DTNSWESRK 154 (318)
Q Consensus 87 s~Dg~v~vWd~-~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~---------~~~~~~~~~ 154 (318)
+.||.|++||+ .++.. ..+.+ |...|.+++|+| +.++++++.|+.|++|++.. .. ....
T Consensus 76 ~~dg~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~ 146 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF---QALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL---NSNN 146 (342)
T ss_dssp ETTSCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEES---CSSS
T ss_pred cCCCeEEEEEeccCCce---EeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCC---eeeE
Confidence 99999999999 87653 45677 999999999999 35789999999999999754 21 1112
Q ss_pred ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEEEcccCCCCeeEEEEcc-CC
Q psy2762 155 IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAP-SW 232 (318)
Q Consensus 155 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp-~~ 232 (318)
+ .|...+.+++|+|+ .|++++.|+.|++||+.. ...........|...|++++|+| +
T Consensus 147 ~-~~~~~v~~~~~~~~-------------------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~- 205 (342)
T 1yfq_A 147 T-KVKNKIFTMDTNSS-------------------RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE- 205 (342)
T ss_dssp S-SSCCCEEEEEECSS-------------------EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG-
T ss_pred E-eeCCceEEEEecCC-------------------cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC-
Confidence 2 37788999999985 399999999999999887 43222233457888999999999 7
Q ss_pred CCCccEEEEEeCCCeEEEEEcCCC--c--ceeeEEeeecCC---------cEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 233 GLSKCMIASCSQDRKVIIWTSNDY--V--TWTPFIMNTFDD---------VVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 233 ~~~~~~l~s~s~D~~i~vw~~~~~--~--~~~~~~~~~~~~---------~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
+.+|++++.|+.|++|+.... . ......+..|.. .|.+++|+|+|++|++++.||.|++||+..
T Consensus 206 ---~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 206 ---QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp ---GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ---CCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 789999999999999998765 0 012234445543 899999999999999999999999999876
Q ss_pred CC
Q psy2762 300 DG 301 (318)
Q Consensus 300 ~~ 301 (318)
+.
T Consensus 283 ~~ 284 (342)
T 1yfq_A 283 RK 284 (342)
T ss_dssp TE
T ss_pred Hh
Confidence 53
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4e-35 Score=266.01 Aligned_cols=256 Identities=17% Similarity=0.268 Sum_probs=205.3
Q ss_pred ecCCCcceeeeeeecCC----C---CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-----ccCeEEEEec
Q psy2762 8 VDTGHEDMIHDAEMDYL----G---LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-----SGPVWQVAWA 75 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~----g---~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-----~~~V~~v~~~ 75 (318)
...+|...|++++|+|+ | ++|++++.|++|++||+..... .....+..+..| ...|++++|+
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE------TKKVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTT------TCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred EEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcc------cccccceeecccccccCCCcEEEEEEe
Confidence 34589999999999999 9 9999999999999999863200 011226788888 6999999997
Q ss_pred CC--CCCcE-EEEEECCCeEEEEeCCC------CcEEE-----EEEe-----cCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762 76 HP--QFGTL-LASCSYDRKVIIWRGDN------GNWFK-----YYEY-----NNHDSSVNSIAWAPKEFGLILACGSSDG 136 (318)
Q Consensus 76 ~~--~~~~~-las~s~Dg~v~vWd~~~------~~~~~-----~~~~-----~~h~~~v~~v~~~p~~~~~~lasgs~d~ 136 (318)
+. .++.+ |++++.|+.|++||+.. +.... .+.. ..|...|.+++|+|+ + ++++++.|+
T Consensus 131 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~l~~~~~dg 207 (397)
T 1sq9_A 131 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER--G-LIATGFNNG 207 (397)
T ss_dssp CCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT--S-EEEEECTTS
T ss_pred eccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC--c-eEEEEeCCC
Confidence 21 24888 99999999999999876 43222 2222 458889999999998 6 899999999
Q ss_pred eEEEEEeecCCCCcceeeecc---c---ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccC
Q psy2762 137 TISFLTYMSDTNSWESRKIAA---H---TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEG 207 (318)
Q Consensus 137 ~i~i~~~~~~~~~~~~~~~~~---h---~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~ 207 (318)
.|++||+.... ....+.. | ..++.+++|+|+ +.+|++++.| +.|++||+.+
T Consensus 208 ~i~i~d~~~~~---~~~~~~~~~~h~~~~~~i~~i~~~~~-----------------~~~l~~~~~d~~~g~i~i~d~~~ 267 (397)
T 1sq9_A 208 TVQISELSTLR---PLYNFESQHSMINNSNSIRSVKFSPQ-----------------GSLLAIAHDSNSFGCITLYETEF 267 (397)
T ss_dssp EEEEEETTTTE---EEEEEECCC---CCCCCEEEEEECSS-----------------TTEEEEEEEETTEEEEEEEETTT
T ss_pred cEEEEECCCCc---eeEEEeccccccccCCccceEEECCC-----------------CCEEEEEecCCCCceEEEEECCC
Confidence 99999975432 3445556 8 889999999996 4789999999 9999999987
Q ss_pred CeEEEEEEccc-------------CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee------ec-
Q psy2762 208 DKWIEETKLEN-------------HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN------TF- 267 (318)
Q Consensus 208 ~~~~~~~~~~~-------------h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~------~~- 267 (318)
++. ...+.+ |...|.+++|+|+ +.+|++++.|+.|+||++.... ....+. .|
T Consensus 268 ~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~ 339 (397)
T 1sq9_A 268 GER--IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS----GETLCSAGWDGKLRFWDVKTKE--RITTLNMHCDDIEIE 339 (397)
T ss_dssp CCE--EEEECBC--------CCBSBSSCEEEEEECSS----SSEEEEEETTSEEEEEETTTTE--EEEEEECCGGGCSSG
T ss_pred Ccc--cceeccCcccccccccccccCCcEEEEEECCC----CCEEEEEeCCCeEEEEEcCCCc--eeEEEecccCcccch
Confidence 754 345667 9999999999996 7899999999999999998754 233444 56
Q ss_pred --------------CCcEEEEEEcCCC----------CEEEEEeCCCeEEEEEECCC
Q psy2762 268 --------------DDVVWNVSWSLTG----------DILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 268 --------------~~~v~~v~~spdg----------~~l~s~~~D~~v~iW~~~~~ 300 (318)
...|.+++|+|+| ++|++++.||.|+||+++.+
T Consensus 340 ~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 340 EDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp GGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred hhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 8899999999999 79999999999999998764
No 62
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.4e-34 Score=295.45 Aligned_cols=250 Identities=22% Similarity=0.365 Sum_probs=211.2
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|.+.|++++|+|+|++|++|+.||+|+|||+. ++..+.++.+|.+.|.+++|++ ++++||+++
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~-----------~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~ 676 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAE-----------TGEKLLDIKAHEDEVLCCAFSS--DDSYIATCS 676 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TCCEEEEECCCSSCEEEEEECT--TSSEEEEEE
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECC-----------CCCEEEEeccCCCCEEEEEEec--CCCEEEEEe
Confidence 457999999999999999999999999999999996 3567889999999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|++|+|||+.+++. ...+.+|...|.+++|+|+....++++|+.|+.|++||+..+. ....+.+|..+|.+++|
T Consensus 677 ~d~~v~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~~~h~~~v~~~~~ 751 (1249)
T 3sfz_A 677 ADKKVKIWDSATGKL--VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFGHTNSVNHCRF 751 (1249)
T ss_dssp TTSEEEEEETTTCCE--EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEECCCSSCEEEEEE
T ss_pred CCCeEEEEECCCCce--EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhheecCCCCCEEEEEE
Confidence 999999999998874 4456789999999999997657799999999999999975443 34556689999999999
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE---------------------------------
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET--------------------------------- 214 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~--------------------------------- 214 (318)
+|+ +.+|++++.|++|++||+.+++.....
T Consensus 752 sp~-----------------~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 814 (1249)
T 3sfz_A 752 SPD-----------------DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKII 814 (1249)
T ss_dssp CSS-----------------TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEE
T ss_pred ecC-----------------CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEE
Confidence 997 356777777888888876654321111
Q ss_pred --------------------EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEE
Q psy2762 215 --------------------KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNV 274 (318)
Q Consensus 215 --------------------~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v 274 (318)
...+|...|.+++|+|+ +.++++++.|+.|++|+..... ....+.+|...|.++
T Consensus 815 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~----~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~h~~~v~~v 888 (1249)
T 3sfz_A 815 VAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY----DHLAVIALSQYCVELWNIDSRL--KVADCRGHLSWVHGV 888 (1249)
T ss_dssp EEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS----TTEEEEECSSSCEEEEETTTTE--EEEEECCCSSCEEEE
T ss_pred EEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCc--eeeecCCCccceEEE
Confidence 11378889999999996 8899999999999999998753 345567889999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762 275 SWSLTGDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 275 ~~spdg~~l~s~~~D~~v~iW~~~ 298 (318)
+|+|+|++|++++.|++|++|+..
T Consensus 889 ~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 889 MFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp EECTTSSEEEEEETTSCEEEEEHH
T ss_pred EECCCCCEEEEEeCCCeEEEEEcc
Confidence 999999999999999999999964
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1e-33 Score=262.57 Aligned_cols=248 Identities=22% Similarity=0.337 Sum_probs=200.1
Q ss_pred ecCCCccee-eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762 8 VDTGHEDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 8 ~~~gH~~~v-~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~ 86 (318)
...||.+.| .++.+ ++++|++|+.||+|++||+. .++.+.++.+|.+.|++++|++ ++ +|++|
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~-----------~~~~~~~~~~h~~~V~~l~~~~--~~-~l~s~ 179 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSI-----------NKKFLLQLSGHDGGVWALKYAH--GG-ILVSG 179 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEECS--TT-EEEEE
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECC-----------CCcEEEEEeCCCcCEEEEEEcC--CC-EEEEE
Confidence 456898886 55555 67899999999999999986 3578899999999999999963 23 99999
Q ss_pred ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc---------------
Q psy2762 87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE--------------- 151 (318)
Q Consensus 87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~--------------- 151 (318)
+.||+|++||+.+++ ....+.+|...|.+++|+|...+.++++++.|++|++|++........
T Consensus 180 s~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 180 STDRTVRVWDIKKGC--CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp ETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGG
T ss_pred eCCCCEEEEECCCCc--EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccC
Confidence 999999999999876 444677899999999999754478999999999999999865432110
Q ss_pred -----eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEE
Q psy2762 152 -----SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV 226 (318)
Q Consensus 152 -----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v 226 (318)
...+.+|...+..+... +.+|++|+.|+.|++||+.+++. ...+.+|...|.++
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~~-------------------~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~ 316 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTVSGH-------------------GNIVVSGSYDNTLIVWDVAQMKC--LYILSGHTDRIYST 316 (464)
T ss_dssp GCTTEEEEECCCSSCEEEEEEE-------------------TTEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEE
T ss_pred CCeEEEEEccCccceEEEEcCC-------------------CCEEEEEeCCCeEEEEECCCCcE--EEEecCCCCCEEEE
Confidence 11223454444444322 46899999999999999988764 45678999999999
Q ss_pred EEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 227 ~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
+|+|+ +.+|++++.|++|++||+.+.. ....+..|...|.+++|+ +++|++++.||+|++||.+....
T Consensus 317 ~~~~~----~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 317 IYDHE----RKRCISASMDTTIRIWDLENGE--LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp EEETT----TTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred EEcCC----CCEEEEEeCCCcEEEEECCCCc--EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce
Confidence 99996 7899999999999999997754 344566789999999997 57999999999999999877543
No 64
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-34 Score=261.06 Aligned_cols=245 Identities=15% Similarity=0.216 Sum_probs=203.5
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg 90 (318)
+|.+.|++++|+|++++|++|+.|+.|+|||.. +..+..+.+|...|.+++|++ ++++|++++.|+
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~------------~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~ 171 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKT------------GALLNVLNFHRAPIVSVKWNK--DGTHIISMDVEN 171 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETT------------SCEEEEECCCCSCEEEEEECT--TSSEEEEEETTC
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC------------CCeeeeccCCCccEEEEEECC--CCCEEEEEecCC
Confidence 478899999999999999999999999999943 457788999999999999964 589999999999
Q ss_pred eEEEEeCCCCcEEEE------------------------------------------------------EEecCCCcCeE
Q psy2762 91 KVIIWRGDNGNWFKY------------------------------------------------------YEYNNHDSSVN 116 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~------------------------------------------------------~~~~~h~~~v~ 116 (318)
.|++||+.+++.... ..+..|...|.
T Consensus 172 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 172 VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp CEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceE
Confidence 999999876543221 12346788999
Q ss_pred EEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC
Q psy2762 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC 196 (318)
Q Consensus 117 ~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~ 196 (318)
+++|+|+ +.++++++.|+.|++|++.... ....+..|...+..+.|+|+ + +|++++.
T Consensus 252 ~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~-----------------~-~l~~~~~ 308 (425)
T 1r5m_A 252 VLEFNDT--NKLLLSASDDGTLRIWHGGNGN---SQNCFYGHSQSIVSASWVGD-----------------D-KVISCSM 308 (425)
T ss_dssp EEEEETT--TTEEEEEETTSCEEEECSSSBS---CSEEECCCSSCEEEEEEETT-----------------T-EEEEEET
T ss_pred EEEECCC--CCEEEEEcCCCEEEEEECCCCc---cceEecCCCccEEEEEECCC-----------------C-EEEEEeC
Confidence 9999998 6689999999999999975433 23445678889999999996 4 7999999
Q ss_pred CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc------------------
Q psy2762 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT------------------ 258 (318)
Q Consensus 197 d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~------------------ 258 (318)
|+.|++||+.+++. ...+..|...|.+++|+|+ +.+|++++.|+.|++|++.....
T Consensus 309 d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~s~~----~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (425)
T 1r5m_A 309 DGSVRLWSLKQNTL--LALSIVDGVPIFAGRISQD----GQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPI 382 (425)
T ss_dssp TSEEEEEETTTTEE--EEEEECTTCCEEEEEECTT----SSEEEEEETTSCEEEEECHHHHC--------------CEEC
T ss_pred CCcEEEEECCCCcE--eEecccCCccEEEEEEcCC----CCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccc
Confidence 99999999988764 4556789999999999996 78999999999999999875320
Q ss_pred eeeEEeeecCC--cEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762 259 WTPFIMNTFDD--VVWNVSWSLTGDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 259 ~~~~~~~~~~~--~v~~v~~spdg~~l~s~~~D~~v~iW~~~ 298 (318)
.....+..|.. .|.+++|+|+|++|++++.||.|+||++.
T Consensus 383 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 383 PLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred hhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 02334456655 99999999999999999999999999864
No 65
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.5e-34 Score=253.91 Aligned_cols=218 Identities=22% Similarity=0.324 Sum_probs=181.1
Q ss_pred ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc---EEEEEEecCCCcCeEEEEeeCCCCCcEEEEe
Q psy2762 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN---WFKYYEYNNHDSSVNSIAWAPKEFGLILACG 132 (318)
Q Consensus 56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~---~~~~~~~~~h~~~v~~v~~~p~~~~~~lasg 132 (318)
..+..++++|.+.|++++|++ ..+++|+||+.|++|++|++.... ..+...+.+|...|.+++|+|+ +.++++|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~-~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d--g~~l~s~ 83 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSA-GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD--GAYALSA 83 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECS-SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT--SSEEEEE
T ss_pred EEEEEEEccccceEEEEEccC-CCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC--CCEEEEE
Confidence 345678999999999999974 346899999999999999975422 1245567899999999999998 7799999
Q ss_pred ecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE
Q psy2762 133 SSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE 212 (318)
Q Consensus 133 s~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~ 212 (318)
+.|++|++||+..+. ....+.+|..+|.+++|+|+ +.+|++|+.|++|+|||++.. .
T Consensus 84 s~D~~v~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~-----------------~~~l~s~s~D~~i~vwd~~~~---~ 140 (319)
T 3frx_A 84 SWDKTLRLWDVATGE---TYQRFVGHKSDVMSVDIDKK-----------------ASMIISGSRDKTIKVWTIKGQ---C 140 (319)
T ss_dssp ETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTT-----------------SCEEEEEETTSCEEEEETTSC---E
T ss_pred eCCCEEEEEECCCCC---eeEEEccCCCcEEEEEEcCC-----------------CCEEEEEeCCCeEEEEECCCC---e
Confidence 999999999975432 34566799999999999996 468999999999999999754 3
Q ss_pred EEEcccCCCCeeEEEEccCCC--CCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762 213 ETKLENHSDWVRDVAWAPSWG--LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN 290 (318)
Q Consensus 213 ~~~~~~h~~~V~~v~~sp~~~--~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~ 290 (318)
...+.+|...|.++.|+|... .++..|++++.|++|++||+.... ....+.+|...|.+++|+|+|++|++++.|+
T Consensus 141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg 218 (319)
T 3frx_A 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFIGHNSNINTLTASPDGTLIASAGKDG 218 (319)
T ss_dssp EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 456789999999999999532 135589999999999999997643 2345668899999999999999999999999
Q ss_pred eEEEEEECCCC
Q psy2762 291 SVSLWKENTDG 301 (318)
Q Consensus 291 ~v~iW~~~~~~ 301 (318)
+|+|||+..+.
T Consensus 219 ~i~iwd~~~~~ 229 (319)
T 3frx_A 219 EIMLWNLAAKK 229 (319)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEEECCCCc
Confidence 99999987653
No 66
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1e-34 Score=254.66 Aligned_cols=223 Identities=20% Similarity=0.322 Sum_probs=177.1
Q ss_pred EEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEE
Q psy2762 60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS 139 (318)
Q Consensus 60 ~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~ 139 (318)
..+.+|.+.|++++|++ +|++||+|+.|++|+|||+..........+.+|..+|.+|+|+|+..+.+|++|+.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~--~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDY--YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECT--TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECC--CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 46789999999999974 5999999999999999998754222445678999999999998743367899999999999
Q ss_pred EEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC
Q psy2762 140 FLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH 219 (318)
Q Consensus 140 i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h 219 (318)
+||...+.. .....+.+|..+|.+++|+|+. .+.+|++++.|++|++||+..+.......+.+|
T Consensus 81 iWd~~~~~~-~~~~~~~~h~~~v~~v~~~p~~---------------~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h 144 (297)
T 2pm7_B 81 IWKEENGRW-SQIAVHAVHSASVNSVQWAPHE---------------YGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH 144 (297)
T ss_dssp EEEBSSSCB-CCCEEECCCSSCEEEEEECCGG---------------GCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC
T ss_pred EEEcCCCce-EEEEEeecCCCceeEEEeCcCC---------------CCcEEEEEECCCcEEEEEecCCCceeeeeeecc
Confidence 999854321 1233456799999999999952 135899999999999999876532223456799
Q ss_pred CCCeeEEEEccCCC---------CCccEEEEEeCCCeEEEEEcCCCcce--eeEEeeecCCcEEEEEEcCCC---CEEEE
Q psy2762 220 SDWVRDVAWAPSWG---------LSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLTG---DILTV 285 (318)
Q Consensus 220 ~~~V~~v~~sp~~~---------~~~~~l~s~s~D~~i~vw~~~~~~~~--~~~~~~~~~~~v~~v~~spdg---~~l~s 285 (318)
...|++++|+|+.. .++.+|++++.|++|+|||+...... ....+.+|...|.+|+|+|++ ++||+
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE
Confidence 99999999999621 12468999999999999998764311 223566899999999999995 89999
Q ss_pred EeCCCeEEEEEECCC
Q psy2762 286 SCGDNSVSLWKENTD 300 (318)
Q Consensus 286 ~~~D~~v~iW~~~~~ 300 (318)
++.|++|+||+.+..
T Consensus 225 ~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 225 VSQDRTCIIWTQDNE 239 (297)
T ss_dssp EETTSCEEEEEESST
T ss_pred EECCCcEEEEEeCCC
Confidence 999999999998764
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.1e-34 Score=256.08 Aligned_cols=255 Identities=15% Similarity=0.105 Sum_probs=203.0
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|...|++++|+|++++|++++.|++|++||+... .......+..|...|.+++|++ ++++|++++
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---------~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~ 115 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR---------TWKPTLVILRINRAARCVRWAP--NEKKFAVGS 115 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT---------EEEEEEECCCCSSCEEEEEECT--TSSEEEEEE
T ss_pred eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC---------eeeeeEEeecCCCceeEEEECC--CCCEEEEEe
Confidence 34589999999999999999999999999999999632 1123445578999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcE--EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCC---------------CCc
Q psy2762 88 YDRKVIIWRGDNGNW--FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT---------------NSW 150 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~---------------~~~ 150 (318)
.|+.|++||+..+.. ........|...|.+++|+|+ +.++++++.|+.|++||+.... ...
T Consensus 116 ~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (372)
T 1k8k_C 116 GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN--SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 193 (372)
T ss_dssp TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT--SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC--CCEEEEEcCCCCEEEEEcccccccccccccccccccchhh
Confidence 999999999877642 122223568899999999998 6789999999999999964210 011
Q ss_pred ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEcc
Q psy2762 151 ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP 230 (318)
Q Consensus 151 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp 230 (318)
....+..|...+..+.|+|+ +.+|++++.|+.|++||+.+++. ...+..|...|++++|+|
T Consensus 194 ~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~ 254 (372)
T 1k8k_C 194 LMFESSSSCGWVHGVCFSAN-----------------GSRVAWVSHDSTVCLADADKKMA--VATLASETLPLLAVTFIT 254 (372)
T ss_dssp EEEECCCCSSCEEEEEECSS-----------------SSEEEEEETTTEEEEEEGGGTTE--EEEEECSSCCEEEEEEEE
T ss_pred heEecCCCCCeEEEEEECCC-----------------CCEEEEEeCCCEEEEEECCCCce--eEEEccCCCCeEEEEEec
Confidence 23445578889999999996 46899999999999999987764 455678999999999999
Q ss_pred CCCCCccEEEEEeCCCeEEEEEcCC--Cc-----------------------------ceee-------EEe-eecCCcE
Q psy2762 231 SWGLSKCMIASCSQDRKVIIWTSND--YV-----------------------------TWTP-------FIM-NTFDDVV 271 (318)
Q Consensus 231 ~~~~~~~~l~s~s~D~~i~vw~~~~--~~-----------------------------~~~~-------~~~-~~~~~~v 271 (318)
+ +.+|+++ .|+.|++|++.. .. .... ..+ .+|...|
T Consensus 255 ~----~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 329 (372)
T 1k8k_C 255 E----SSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSV 329 (372)
T ss_dssp T----TEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCE
T ss_pred C----CCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCc
Confidence 6 6777766 999999999876 21 0000 112 3788999
Q ss_pred EEEEEc-CCC---CEEEEEeCCCeEEEEEECC
Q psy2762 272 WNVSWS-LTG---DILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 272 ~~v~~s-pdg---~~l~s~~~D~~v~iW~~~~ 299 (318)
.+++|+ ++| ++|+|++.||+|++|+++.
T Consensus 330 ~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 330 SQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp EEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred ceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 999976 677 9999999999999999765
No 68
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=246.92 Aligned_cols=247 Identities=18% Similarity=0.174 Sum_probs=203.0
Q ss_pred eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762 6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS 85 (318)
Q Consensus 6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las 85 (318)
.....||.+.|++++| |++++|++|+.||+|+|||+. .+.....+..|.+.|.+++|++ ++.+|++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~-----------~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~ 76 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKD-----------DQWLGTVVYTGQGFLNSVCYDS--EKELLLF 76 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEES-----------SSEEEEEEEECSSCEEEEEEET--TTTEEEE
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECC-----------CCEEEEEeecCCccEEEEEECC--CCCEEEE
Confidence 3456899999999999 999999999999999999996 3466788889999999999974 5899999
Q ss_pred EECCCeEEEEeCCCCc-EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762 86 CSYDRKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA 164 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~ 164 (318)
++.|+.|++|++.... ......+.+|...|.+++|. +.++++++.|+.|++|+. . .....+..|..++..
T Consensus 77 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~~~d~--~---~~~~~~~~~~~~v~~ 147 (313)
T 3odt_A 77 GGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ----DGVVISGSWDKTAKVWKE--G---SLVYNLQAHNASVWD 147 (313)
T ss_dssp EETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEET--T---EEEEEEECCSSCEEE
T ss_pred ecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec----CCEEEEEeCCCCEEEEcC--C---cEEEecccCCCceeE
Confidence 9999999999986542 12344567899999999995 347999999999999982 1 234456689999999
Q ss_pred eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-CCCCeeEEEEccCCCCCccEEEEEe
Q psy2762 165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCS 243 (318)
Q Consensus 165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~s 243 (318)
+.|.|.. +.+|++++.|+.|++||.. + ....+.. |...|.+++|+|+ +. |++++
T Consensus 148 ~~~~~~~----------------~~~l~~~~~d~~i~i~d~~--~--~~~~~~~~~~~~i~~~~~~~~----~~-~~~~~ 202 (313)
T 3odt_A 148 AKVVSFS----------------ENKFLTASADKTIKLWQND--K--VIKTFSGIHNDVVRHLAVVDD----GH-FISCS 202 (313)
T ss_dssp EEEEETT----------------TTEEEEEETTSCEEEEETT--E--EEEEECSSCSSCEEEEEEEET----TE-EEEEE
T ss_pred EEEccCC----------------CCEEEEEECCCCEEEEecC--c--eEEEEeccCcccEEEEEEcCC----Ce-EEEcc
Confidence 9998731 4689999999999999943 2 2344555 8999999999996 55 99999
Q ss_pred CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762 244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 303 (318)
Q Consensus 244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~ 303 (318)
.|+.|++||+.... ....+..|...|.+++|+|+| .|++++.|+.|++||+..+...
T Consensus 203 ~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 203 NDGLIKLVDMHTGD--VLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLK 259 (313)
T ss_dssp TTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEE
T ss_pred CCCeEEEEECCchh--hhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCcee
Confidence 99999999998754 234566788999999999999 5889999999999998776433
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.2e-35 Score=260.62 Aligned_cols=255 Identities=15% Similarity=0.269 Sum_probs=201.1
Q ss_pred eecCCCcceeeeeeecCC----CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-----cccCeEEEEecCC
Q psy2762 7 LVDTGHEDMIHDAEMDYL----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-----HSGPVWQVAWAHP 77 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~----g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----h~~~V~~v~~~~~ 77 (318)
.+..||.+.|++++|+|+ ..++++++.++.|+|||+.. +..+..+.. |...|++++|+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~~~ 80 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS-----------QGEIRLLQSYVDADADENFYTCAWTYD 80 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG-----------GGCEEEEEEEECSCTTCCEEEEEEEEC
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC-----------CcEEEeeeeccccCCCCcEEEEEeccC
Confidence 566799999999999984 45566666677999999963 223333433 6688999999753
Q ss_pred CC--CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee
Q psy2762 78 QF--GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI 155 (318)
Q Consensus 78 ~~--~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~ 155 (318)
.. +.+|++|+.||+|++||+.+++. ...+.+|...|.+++|+|++ +.++++++.|+.|++||+.... ....+
T Consensus 81 ~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~---~~~~~ 154 (366)
T 3k26_A 81 SNTSHPLLAVAGSRGIIRIINPITMQC--IKHYVGHGNAINELKFHPRD-PNLLLSVSKDHALRLWNIQTDT---LVAIF 154 (366)
T ss_dssp TTTCCEEEEEEETTCEEEEECTTTCCE--EEEEESCCSCEEEEEECSSC-TTEEEEEETTSCEEEEETTTTE---EEEEE
T ss_pred CCCCCCEEEEecCCCEEEEEEchhceE--eeeecCCCCcEEEEEECCCC-CCEEEEEeCCCeEEEEEeecCe---EEEEe
Confidence 22 57999999999999999988764 34566899999999999932 6789999999999999975432 22333
Q ss_pred ---cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE---------------------
Q psy2762 156 ---AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI--------------------- 211 (318)
Q Consensus 156 ---~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~--------------------- 211 (318)
..|...+.+++|+|+ +.+|++++.|+.|++||+.+++..
T Consensus 155 ~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLL-----------------GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQ 217 (366)
T ss_dssp CSTTSCSSCEEEEEECTT-----------------SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCE
T ss_pred cccccccCceeEEEECCC-----------------CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccce
Confidence 579999999999996 468999999999999998764321
Q ss_pred -----EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc------------eeeEEeeecCCcEEEE
Q psy2762 212 -----EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT------------WTPFIMNTFDDVVWNV 274 (318)
Q Consensus 212 -----~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~------------~~~~~~~~~~~~v~~v 274 (318)
......+|...|.+++|++ .+|++++.|+.|++|++..... .....+..|...|..+
T Consensus 218 ~~~~~~~~~~~~~~~~v~~~~~~~------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 291 (366)
T 3k26_A 218 KIHFPDFSTRDIHRNYVDCVRWLG------DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYM 291 (366)
T ss_dssp EECCCSEEECSSCSSCCCEEEEET------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCC
T ss_pred eeccCccccccCCcceEEEEEEcC------CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEE
Confidence 0122344999999999983 4899999999999999876532 1233455678889999
Q ss_pred EEcCC--CCEEEEEeCCCeEEEEEECCCC
Q psy2762 275 SWSLT--GDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 275 ~~spd--g~~l~s~~~D~~v~iW~~~~~~ 301 (318)
+|+|+ |++|++++.||.|++|++..+.
T Consensus 292 ~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 292 RFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp CCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred EEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 99999 9999999999999999988754
No 70
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2e-34 Score=260.84 Aligned_cols=245 Identities=15% Similarity=0.172 Sum_probs=188.8
Q ss_pred CCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec---ccccCeEEEEecCCCCCcEEEE
Q psy2762 10 TGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK---GHSGPVWQVAWAHPQFGTLLAS 85 (318)
Q Consensus 10 ~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~---~h~~~V~~v~~~~~~~~~~las 85 (318)
.+|...|.+++|+| ++++|++++.|++|++||+.. ..+..+. +|...|.+++|++ ++.+|++
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~ 180 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG------------SVIQVFAKTDSWDYWYCCVDVSV--SRQMLAT 180 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS------------CEEEEEECCCCSSCCEEEEEEET--TTTEEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC------------CceEEEeccCCCCCCeEEEEECC--CCCEEEE
Confidence 47999999999999 789999999999999999962 2344444 4558899999974 5899999
Q ss_pred EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCc-EEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762 86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL-ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA 164 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~-~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~ 164 (318)
++.|+.|++||+. +. ....+.+|...|.+++|+|+ +. ++++++.|+.|++||+.............+|...+.+
T Consensus 181 ~~~d~~i~i~d~~-~~--~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 255 (383)
T 3ei3_B 181 GDSTGRLLLLGLD-GH--EIFKEKLHKAKVTHAEFNPR--CDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNA 255 (383)
T ss_dssp EETTSEEEEEETT-SC--EEEEEECSSSCEEEEEECSS--CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEE
T ss_pred ECCCCCEEEEECC-CC--EEEEeccCCCcEEEEEECCC--CCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEE
Confidence 9999999999995 33 34456789999999999998 45 8999999999999998764322223333479999999
Q ss_pred eeeCC-CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE-----cccCCCCee----------EEEE
Q psy2762 165 VSWGP-GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK-----LENHSDWVR----------DVAW 228 (318)
Q Consensus 165 ~~~~p-~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~-----~~~h~~~V~----------~v~~ 228 (318)
++|+| + +.+|++++.|+.|+|||+.+++...... ...|...+. .+.|
T Consensus 256 ~~~s~~~-----------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 256 AYFNPTD-----------------STKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp EEECTTT-----------------SCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred EEEcCCC-----------------CCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence 99999 6 4789999999999999987654221111 112333333 3555
Q ss_pred ccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 229 APSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 229 sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~--~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
+|+ +.+ +++.|++|+|||+..... ...+.. +...+..++|+|+|++|++++ |+.|+||+++.
T Consensus 319 s~d----g~~--s~s~d~~i~iwd~~~~~~--~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 319 YPD----DQL--LLNDKRTIDIYDANSGGL--VHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp BCC----TTT--CTTCCCCEEEEETTTCCE--EEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred cCC----ccc--ccCCCCeEEEEecCCCce--eeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 554 433 778999999999977542 333443 456787889999999999997 99999999764
No 71
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=257.73 Aligned_cols=265 Identities=18% Similarity=0.262 Sum_probs=195.1
Q ss_pred ecCCCcceeeeeeecCC---CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762 8 VDTGHEDMIHDAEMDYL---GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~---g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la 84 (318)
+..+|.+.|++++|+|+ |++|++|+.||+|+|||+... .......+.+|.+.|++++|++ ++++|+
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~---------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~ 102 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS---------GQTIPKAQQMHTGPVLDVCWSD--DGSKVF 102 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT---------SCEEEEEEEECSSCEEEEEECT--TSSEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC---------CceeEEEeccccCCEEEEEECc--CCCEEE
Confidence 56799999999999999 699999999999999999731 1234478889999999999974 589999
Q ss_pred EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEe--eCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW--APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC 162 (318)
Q Consensus 85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v 162 (318)
+++.|++|++||+.+++... +..|...|.+++| +|+ +.++++++.|+.|++||+..... ...+..|. .+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~-~~ 173 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQ---IAQHDAPVKTIHWIKAPN--YSCVMTGSWDKTLKFWDTRSSNP---MMVLQLPE-RC 173 (368)
T ss_dssp EEETTSEEEEEETTTTEEEE---EEECSSCEEEEEEEECSS--CEEEEEEETTSEEEEECSSCSSC---SEEEECSS-CE
T ss_pred EEcCCCcEEEEEcCCCCcee---eccccCceEEEEEEeCCC--CCEEEEccCCCcEEEEECCCCcE---EEEEecCC-Cc
Confidence 99999999999999876433 4469999999999 665 78899999999999999855432 12222222 22
Q ss_pred ceeeeCCCC-------CCCccccccCC---------------------CCC-CccceEEEecCCCeEEEEEccCCeE-EE
Q psy2762 163 NAVSWGPGI-------GSLSELDLKGS---------------------KLG-GVAKRLVSGGCDNLIKIWKQEGDKW-IE 212 (318)
Q Consensus 163 ~~~~~~p~~-------~~~~~~~~~~~---------------------~~~-~~~~~lasgs~d~~i~iwd~~~~~~-~~ 212 (318)
..+.+.+.. +.+...+.... ... .....+++++.|+.|++|++..... ..
T Consensus 174 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 174 YCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp EEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred eEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence 222222210 00000000000 000 0012399999999999999876521 12
Q ss_pred EEEcccCCC------------CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC
Q psy2762 213 ETKLENHSD------------WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG 280 (318)
Q Consensus 213 ~~~~~~h~~------------~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg 280 (318)
...+.+|.. .|++++|+|+ +.+|++++.|+.|+|||+.... ....+..|..+|.+++|+|||
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~----~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPV----HGTLATVGSDGRFSFWDKDART--KLKTSEQLDQPISACCFNHNG 327 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTT----TCCEEEEETTSCEEEEETTTTE--EEEECCCCSSCEEEEEECTTS
T ss_pred ceeeeeeecccccccccccccceEEEEEecC----CCEEEEEccCCeEEEEECCCCc--EEEEecCCCCCceEEEECCCC
Confidence 344556655 7999999996 7899999999999999998753 244566788999999999999
Q ss_pred CEEEEEeCCCeEEEEEEC
Q psy2762 281 DILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 281 ~~l~s~~~D~~v~iW~~~ 298 (318)
++|++++.|+..+.|+..
T Consensus 328 ~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 328 NIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp SCEEEEECCCSTTCGGGC
T ss_pred CeEEEEeccccccccccc
Confidence 999999998866665543
No 72
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.3e-33 Score=260.21 Aligned_cols=246 Identities=20% Similarity=0.281 Sum_probs=205.0
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|.+.|.+++|+|++ +|++|+.||+|+|||+. ++..+..+.+|.+.|.+++|.+..++.+|++|+
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s 224 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK-----------KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS 224 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEE
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC-----------CCcEEEEECCCCCccEEEEEecCCCCCEEEEEc
Confidence 346899999999999988 99999999999999996 356788999999999999997534679999999
Q ss_pred CCCeEEEEeCCCCcEE---------------------EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecC
Q psy2762 88 YDRKVIIWRGDNGNWF---------------------KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSD 146 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~---------------------~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~ 146 (318)
.|++|++||+.+.... ....+.+|...|.++. ++ +.++++++.|+.|++||+...
T Consensus 225 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~--~~~l~~~~~d~~i~vwd~~~~ 300 (464)
T 3v7d_B 225 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GH--GNIVVSGSYDNTLIVWDVAQM 300 (464)
T ss_dssp TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EE--TTEEEEEETTSCEEEEETTTT
T ss_pred CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CC--CCEEEEEeCCCeEEEEECCCC
Confidence 9999999998765421 1335678888998885 44 558999999999999997533
Q ss_pred CCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEE
Q psy2762 147 TNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV 226 (318)
Q Consensus 147 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v 226 (318)
. ....+.+|..++.++.|+|+ +.+|++|+.|++|++||+.+++. ...+.+|...|.++
T Consensus 301 ~---~~~~~~~~~~~v~~~~~~~~-----------------~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~ 358 (464)
T 3v7d_B 301 K---CLYILSGHTDRIYSTIYDHE-----------------RKRCISASMDTTIRIWDLENGEL--MYTLQGHTALVGLL 358 (464)
T ss_dssp E---EEEEECCCSSCEEEEEEETT-----------------TTEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEE
T ss_pred c---EEEEecCCCCCEEEEEEcCC-----------------CCEEEEEeCCCcEEEEECCCCcE--EEEEeCCCCcEEEE
Confidence 2 34556689999999999996 46899999999999999988864 45678999999999
Q ss_pred EEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 227 ~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
.|++ .+|++++.|++|++||+.+... .....+...+..++|+|++++|++++ |+.|+|||+..+.
T Consensus 359 ~~~~------~~l~s~s~dg~v~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 359 RLSD------KFLVSAAADGSIRGWDANDYSR---KFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp EECS------SEEEEEETTSEEEEEETTTCCE---EEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred EEcC------CEEEEEeCCCcEEEEECCCCce---eeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc
Confidence 9975 4899999999999999987541 22234566788899999999999988 8999999987764
No 73
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.3e-34 Score=262.07 Aligned_cols=251 Identities=19% Similarity=0.280 Sum_probs=198.2
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|.+.|++++|+|++++|++|+.|++|+|||+.. ++.+..+.+|.+.|++++|++ ++.+|++++
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~-----------~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~ 200 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD-----------GSNPRTLIGHRATVTDIAIID--RGRNVLSAS 200 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----------CCCCEEEECCSSCEEEEEEET--TTTEEEEEE
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC-----------CcCceEEcCCCCcEEEEEEcC--CCCEEEEEc
Confidence 4569999999999999999999999999999999963 345678899999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEec-CCCcCeEEEE---------------------eeCCCCCcEEEEeecCCeEEEEEeec
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYN-NHDSSVNSIA---------------------WAPKEFGLILACGSSDGTISFLTYMS 145 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~-~h~~~v~~v~---------------------~~p~~~~~~lasgs~d~~i~i~~~~~ 145 (318)
.|++|++||+.+++....+... .|...|.+++ |+|+ +.++++++.|+.|++||+..
T Consensus 201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 201 LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY--GKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT--TEEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC--CCEEEEEcCCCeEEEEECCC
Confidence 9999999999887654433221 2444555555 4666 67999999999999999854
Q ss_pred CCCCcceeee-cccccccceeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccCCeEEEEEEccc-CCCC
Q psy2762 146 DTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDW 222 (318)
Q Consensus 146 ~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~ 222 (318)
.. ....+ ..|...+.+++|+|+ +. +|++|+.|+.|++||+.+++. ....+.+ |...
T Consensus 279 ~~---~~~~~~~~~~~~v~~~~~~~~-----------------~~~~l~~g~~dg~i~vwd~~~~~~-~~~~~~~~~~~~ 337 (420)
T 3vl1_A 279 KE---QTIQLPSKFTCSCNSLTVDGN-----------------NANYIYAGYENGMLAQWDLRSPEC-PVGEFLINEGTP 337 (420)
T ss_dssp CC---EEEEECCTTSSCEEEEEECSS-----------------CTTEEEEEETTSEEEEEETTCTTS-CSEEEEESTTSC
T ss_pred Cc---eeEEcccccCCCceeEEEeCC-----------------CCCEEEEEeCCCeEEEEEcCCCcC-chhhhhccCCCC
Confidence 43 22233 368889999999997 34 899999999999999987642 1233444 7778
Q ss_pred eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc-------eeeEEeeecCCcEEEEEEcCCCC---EEEEEeCCCeE
Q psy2762 223 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT-------WTPFIMNTFDDVVWNVSWSLTGD---ILTVSCGDNSV 292 (318)
Q Consensus 223 V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~-------~~~~~~~~~~~~v~~v~~spdg~---~l~s~~~D~~v 292 (318)
|.++.|.+ +.+|++++.|++|++|++..... ..+..+..+...|.+++|+|+++ .|++++.+|.+
T Consensus 338 v~~~~~~~-----~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~ 412 (420)
T 3vl1_A 338 INNVYFAA-----GALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFC 412 (420)
T ss_dssp EEEEEEET-----TEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEE
T ss_pred ceEEEeCC-----CCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceE
Confidence 88886654 67999999999999999876321 11234556778899999999999 77788889999
Q ss_pred EEEEECC
Q psy2762 293 SLWKENT 299 (318)
Q Consensus 293 ~iW~~~~ 299 (318)
++|+++.
T Consensus 413 ~~~~~~~ 419 (420)
T 3vl1_A 413 ALYNLSN 419 (420)
T ss_dssp EEEESCC
T ss_pred EEEeccC
Confidence 9998653
No 74
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6e-35 Score=263.44 Aligned_cols=255 Identities=16% Similarity=0.157 Sum_probs=190.6
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|...|++++|+|++++|++|+.|++|+|||+... ........+.+|.+.|++++|++ ++++|++++
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~--------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~ 119 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD--------GTWKQTLVLLRLNRAATFVRWSP--NEDKFAVGS 119 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--------------CCCCEEECCCCSSCEEEEECCT--TSSCCEEEE
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC--------CceeeeeEecccCCceEEEEECC--CCCEEEEEe
Confidence 45689999999999999999999999999999999732 01124677889999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcE-EEEEEecC-CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC--------------Cc-
Q psy2762 88 YDRKVIIWRGDNGNW-FKYYEYNN-HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN--------------SW- 150 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~-~~~~~~~~-h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~--------------~~- 150 (318)
.|++|++||+..+.. .....+.+ |...|.+++|+|+ +.++++++.|+.|++||+..... ..
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3dwl_C 120 GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN--NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNT 197 (377)
T ss_dssp SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT--SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC--CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhh
Confidence 999999999987641 11334556 9999999999998 67999999999999999842210 01
Q ss_pred ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE--EEEEEcccCCCCeeEEEE
Q psy2762 151 ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW--IEETKLENHSDWVRDVAW 228 (318)
Q Consensus 151 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~--~~~~~~~~h~~~V~~v~~ 228 (318)
....+ +|...+.+++|+|+ +.+|++++.|++|+|||+.+++. .....+.+|...|.+++|
T Consensus 198 ~~~~~-~~~~~v~~~~~sp~-----------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 259 (377)
T 3dwl_C 198 VCAEY-PSGGWVHAVGFSPS-----------------GNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLW 259 (377)
T ss_dssp EEECC-CCSSSEEEEEECTT-----------------SSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEE
T ss_pred hhhcc-cCCceEEEEEECCC-----------------CCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEE
Confidence 11223 78889999999997 46899999999999999987653 124567899999999999
Q ss_pred ccCCCCCccEEEEEeCCCeEEEEEcCCCc-------c------------------e-ee--------E------------
Q psy2762 229 APSWGLSKCMIASCSQDRKVIIWTSNDYV-------T------------------W-TP--------F------------ 262 (318)
Q Consensus 229 sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-------~------------------~-~~--------~------------ 262 (318)
+|+ +.+|++++.|+.+ +|+..... . . .. .
T Consensus 260 s~~----~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 334 (377)
T 3dwl_C 260 ANE----SAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQ 334 (377)
T ss_dssp EET----TEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-----------------------
T ss_pred cCC----CCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccc
Confidence 996 7889998877766 66554211 0 0 00 0
Q ss_pred ----EeeecCCcEEEEEEcCCC-C---EEEEEeCCCeEEEEEE
Q psy2762 263 ----IMNTFDDVVWNVSWSLTG-D---ILTVSCGDNSVSLWKE 297 (318)
Q Consensus 263 ----~~~~~~~~v~~v~~spdg-~---~l~s~~~D~~v~iW~~ 297 (318)
....|...|.++.+.+.+ . .|+|+|.||.|+|||+
T Consensus 335 ~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 335 SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp --CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 011278899999977654 3 6999999999999974
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.3e-34 Score=253.08 Aligned_cols=258 Identities=13% Similarity=0.185 Sum_probs=195.8
Q ss_pred eecCCCcceeeeeeecCCCCEEE-EeeC---CCcEEEEEcCCCcCCCCCCCCcceEE-EEecccccCeEEEEecCCC-CC
Q psy2762 7 LVDTGHEDMIHDAEMDYLGLYLA-TCSS---DHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQ-FG 80 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g~~l~-s~s~---D~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~~~~-~~ 80 (318)
.+..+|.+.|++++|+|++.+++ +|+. |++|+|||+... ... ....+|.+.|.+++|++.. ++
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~ 80 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG-----------DLKLLREIEKAKPIKCGTFGATSLQQ 80 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS-----------SEEEEEEEEESSCEEEEECTTCCTTT
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC-----------cccceeeecccCcEEEEEEcCCCCCC
Confidence 45578999999999999996554 5655 999999999732 222 2234799999999997421 16
Q ss_pred cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEe------eCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762 81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW------APKEFGLILACGSSDGTISFLTYMSDTNSWESRK 154 (318)
Q Consensus 81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~------~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~ 154 (318)
.+|++++.|+.|++||+.++.. ....+.+|...|.+++| +|+ +.++++++.|+.|++||+..... ....
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~s~~--~~~l~~~~~d~~i~vwd~~~~~~--~~~~ 155 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEM-PVYSVKGHKEIINAIDGIGGLGIGEG--APEIVTGSRDGTVKVWDPRQKDD--PVAN 155 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSS-CSEEECCCSSCEEEEEEESGGGCC-C--CCEEEEEETTSCEEEECTTSCSS--CSEE
T ss_pred ceEEEecCCCeEEEEeCCCCCc-cEEEEEecccceEEEeeccccccCCC--ccEEEEEeCCCeEEEEeCCCCCC--ccee
Confidence 9999999999999999987651 23346789999999965 565 67899999999999999855431 2233
Q ss_pred ecccc----cccceee----eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEE
Q psy2762 155 IAAHT----IGCNAVS----WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV 226 (318)
Q Consensus 155 ~~~h~----~~v~~~~----~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v 226 (318)
+..|. ..+.++. |+|+ +.+|++++.|+.|++||+++++.. ....|...|.++
T Consensus 156 ~~~~~~~~~~~v~~~~~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~v~~~ 215 (357)
T 3i2n_A 156 MEPVQGENKRDCWTVAFGNAYNQE-----------------ERVVCAGYDNGDIKLFDLRNMALR---WETNIKNGVCSL 215 (357)
T ss_dssp ECCCTTSCCCCEEEEEEECCCC-C-----------------CCEEEEEETTSEEEEEETTTTEEE---EEEECSSCEEEE
T ss_pred ccccCCCCCCceEEEEEEeccCCC-----------------CCEEEEEccCCeEEEEECccCcee---eecCCCCceEEE
Confidence 33333 3677777 4554 578999999999999999887642 235788899999
Q ss_pred EEccCCCCCccEEEEEeCCCeEEEEEcCCCccee---eEEeeecCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEECCCC
Q psy2762 227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT---PFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 227 ~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~---~~~~~~~~~~v~~v~~spdg~-~l~s~~~D~~v~iW~~~~~~ 301 (318)
+|+|.. .++.+|++++.|+.|++|++....... ...+..|...|.+++|+|+++ +|++++.||.|++|+++.+.
T Consensus 216 ~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 216 EFDRKD-ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EESCSS-SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred EcCCCC-CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 999921 016789999999999999987643211 112347889999999999998 89999999999999987643
No 76
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-33 Score=245.57 Aligned_cols=243 Identities=21% Similarity=0.294 Sum_probs=200.7
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|...|.+++|+|++++|++++.|+.|++|++... .....+..+.+|...|.++.|. +++|++++
T Consensus 54 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~ 121 (313)
T 3odt_A 54 VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT--------SGEDPLYTLIGHQGNVCSLSFQ----DGVVISGS 121 (313)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC--------TTSCC-CEECCCSSCEEEEEEE----TTEEEEEE
T ss_pred EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec--------CCCCcccchhhcccCEEEEEec----CCEEEEEe
Confidence 34578999999999999999999999999999998632 2334567789999999999993 67999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-cccccceee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVS 166 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~-h~~~v~~~~ 166 (318)
.|++|++|| .+. ....+..|...+.+++|.|.. +.++++++.|+.|++||. . .....+.. |...+..++
T Consensus 122 ~d~~i~~~d--~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~i~i~d~--~---~~~~~~~~~~~~~i~~~~ 191 (313)
T 3odt_A 122 WDKTAKVWK--EGS--LVYNLQAHNASVWDAKVVSFS-ENKFLTASADKTIKLWQN--D---KVIKTFSGIHNDVVRHLA 191 (313)
T ss_dssp TTSEEEEEE--TTE--EEEEEECCSSCEEEEEEEETT-TTEEEEEETTSCEEEEET--T---EEEEEECSSCSSCEEEEE
T ss_pred CCCCEEEEc--CCc--EEEecccCCCceeEEEEccCC-CCEEEEEECCCCEEEEec--C---ceEEEEeccCcccEEEEE
Confidence 999999999 333 344566899999999999832 568999999999999983 1 12334444 888999999
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~ 246 (318)
|+|+ +. |++++.|+.|++||+.+++. ...+.+|...|++++|+|+ + .|++++.|+
T Consensus 192 ~~~~-----------------~~-~~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~----~-~l~~~~~dg 246 (313)
T 3odt_A 192 VVDD-----------------GH-FISCSNDGLIKLVDMHTGDV--LRTYEGHESFVYCIKLLPN----G-DIVSCGEDR 246 (313)
T ss_dssp EEET-----------------TE-EEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECTT----S-CEEEEETTS
T ss_pred EcCC-----------------Ce-EEEccCCCeEEEEECCchhh--hhhhhcCCceEEEEEEecC----C-CEEEEecCC
Confidence 9986 34 99999999999999988764 4566789999999999996 5 599999999
Q ss_pred eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
.|++||+.... ....+..+...|.+++|+|+|+ |++++.|+.|++|+++.+
T Consensus 247 ~v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 247 TVRIWSKENGS--LKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEEEECTTTCC--EEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred EEEEEECCCCc--eeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 99999988754 2345567788999999999998 557999999999997764
No 77
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=5.9e-35 Score=266.38 Aligned_cols=258 Identities=15% Similarity=0.147 Sum_probs=168.7
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC------CCCCcEEE
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH------PQFGTLLA 84 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~------~~~~~~la 84 (318)
+|...+....+++++.+|++++.|++|+|||+.... ......+..+.+|.+.|++++|++ +.++++||
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~------~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~la 160 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNET------IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIA 160 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTE------EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCc------cceeeeecccCCCCCceEEEEEccccccccCCCCCEEE
Confidence 455555556667788899999999999999986320 001123456789999999999973 23689999
Q ss_pred EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-----------
Q psy2762 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR----------- 153 (318)
Q Consensus 85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~----------- 153 (318)
|||.|++|+|||+.++.. ...+..|...|.+|+|+|++ ..++++++.|++|++||+..+.......
T Consensus 161 s~s~D~tv~~Wd~~~~~~--~~~~~~~~~~v~~v~~~p~~-~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~ 237 (393)
T 4gq1_A 161 SVGDDCTLIIWRLTDEGP--ILAGYPLSSPGISVQFRPSN-PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLL 237 (393)
T ss_dssp EEETTSEEEEEEEETTEE--EEEEEECSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCCC----------CSCCCSE
T ss_pred EEECCCeEEEEECCCCce--eeeecCCCCCcEEEEECCCC-CceEEecCCCCEEEEEECCCCcccccccccCCcccceEE
Confidence 999999999999977653 33455688999999999984 3589999999999999986543211000
Q ss_pred -----------eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCC
Q psy2762 154 -----------KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDW 222 (318)
Q Consensus 154 -----------~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~ 222 (318)
...+|...+..+.|++. .+..|++++.|+++++||+..++. ...+..|...
T Consensus 238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~----------------dg~~l~s~s~d~~i~vwd~~~~~~--~~~l~~~~~~ 299 (393)
T 4gq1_A 238 TLNTLPLVNTCHSSGIASSLANVRWIGS----------------DGSGILAMCKSGAWLRWNLFANND--YNEISDSTMK 299 (393)
T ss_dssp EEESGGGC------CCSSSCSEEEEETT----------------TTCEEEEECTTSEEEEEEC-----------------
T ss_pred ecccccceeeeecccccccceeeeeecC----------------CCCEEEEEeCCCCEEEEECccCCC--CceEeeecCc
Confidence 01234455556665421 156899999999999999876542 2333444444
Q ss_pred eeEEEEccCC----------------CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE
Q psy2762 223 VRDVAWAPSW----------------GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS 286 (318)
Q Consensus 223 V~~v~~sp~~----------------~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~ 286 (318)
+..+.+.|+. ..++.++++++.|++|+|||...... ...+..|..+|.+|+|+|||++||++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS--NSIPIQLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC--CEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE--EEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 4444333321 02456788999999999999987642 33456788899999999999999999
Q ss_pred eCCCeEEEEEEC
Q psy2762 287 CGDNSVSLWKEN 298 (318)
Q Consensus 287 ~~D~~v~iW~~~ 298 (318)
+.|| +.+|++.
T Consensus 378 s~~G-v~lvrL~ 388 (393)
T 4gq1_A 378 TEGS-VLLTRLM 388 (393)
T ss_dssp ESSE-EEEEEEG
T ss_pred eCCC-eEEEEEe
Confidence 8765 6677653
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-34 Score=262.03 Aligned_cols=260 Identities=18% Similarity=0.322 Sum_probs=205.2
Q ss_pred CCcceeeeeeecCCCC-EEEEe----------eCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCC
Q psy2762 11 GHEDMIHDAEMDYLGL-YLATC----------SSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQF 79 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~-~l~s~----------s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~ 79 (318)
.+...|.+++|+|+|+ +|++| +.|++|+|||+.... ....+..+ .|...|++++|++ +
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~--------~~~~~~~~-~~~~~v~~~~~s~--~ 78 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAAD--------SEKPIASL-QVDSKFNDLDWSH--N 78 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGG--------GCSCSCCC-CCSSCEEEEEECS--S
T ss_pred hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCC--------CCcEEEEE-ecCCceEEEEECC--C
Confidence 3567899999999997 99999 899999999997321 00122223 5899999999974 5
Q ss_pred CcEEEEEECCCeEEEEeCCCC--cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCC------CCcc
Q psy2762 80 GTLLASCSYDRKVIIWRGDNG--NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT------NSWE 151 (318)
Q Consensus 80 ~~~las~s~Dg~v~vWd~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~------~~~~ 151 (318)
+.+|++++.|+.|++||+... .......+.+|...|.+++|+|++ +.++++++.|+.|++||+.... ....
T Consensus 79 ~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 157 (416)
T 2pm9_A 79 NKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ-DNVLASGGNNGEIFIWDMNKCTESPSNYTPLT 157 (416)
T ss_dssp SSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS-TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC
T ss_pred CCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC-CCEEEEEcCCCeEEEEECCCCccccccccccc
Confidence 899999999999999998761 112445677899999999999973 4689999999999999986543 2112
Q ss_pred eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC------CCCeeE
Q psy2762 152 SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH------SDWVRD 225 (318)
Q Consensus 152 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h------~~~V~~ 225 (318)
......|...+.+++|+|+. +.+|++++.|+.|++||+.+++.. ..+..| ...|++
T Consensus 158 ~~~~~~~~~~v~~~~~~~~~----------------~~~l~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 158 PGQSMSSVDEVISLAWNQSL----------------AHVFASAGSSNFASIWDLKAKKEV--IHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp CCCSCCSSCCCCEEEECSSC----------------TTEEEEESSSSCEEEEETTTTEEE--EEECCCCCSSCCCCCEEE
T ss_pred cccccCCCCCeeEEEeCCCC----------------CcEEEEEcCCCCEEEEECCCCCcc--eEEeccccccccCCceEE
Confidence 22335788899999999963 358999999999999999887654 334444 788999
Q ss_pred EEEccCCCCCccEEEEEeCCC---eEEEEEcCCCcceeeEEee-ecCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEECCC
Q psy2762 226 VAWAPSWGLSKCMIASCSQDR---KVIIWTSNDYVTWTPFIMN-TFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 226 v~~sp~~~~~~~~l~s~s~D~---~i~vw~~~~~~~~~~~~~~-~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW~~~~~ 300 (318)
++|+|+ +..+|++++.|+ .|++||+..... ....+. .|...|.+++|+| ++++|++++.|++|++||+..+
T Consensus 220 ~~~~~~---~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 220 VEWHPK---NSTRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp EEECSS---CTTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred EEECCC---CCCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 999997 346899999999 999999987431 123344 6889999999999 9999999999999999998776
Q ss_pred CceE
Q psy2762 301 GAWQ 304 (318)
Q Consensus 301 ~~~~ 304 (318)
....
T Consensus 296 ~~~~ 299 (416)
T 2pm9_A 296 EQLS 299 (416)
T ss_dssp CEEE
T ss_pred ccce
Confidence 4433
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.1e-34 Score=260.30 Aligned_cols=260 Identities=15% Similarity=0.189 Sum_probs=201.3
Q ss_pred ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCC-cEEEE
Q psy2762 8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG-TLLAS 85 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~-~~las 85 (318)
...+|.+.|++++|+| ++++|++|+.||+|+|||+...... ......+..+.+|.+.|++++|++ ++ .+|++
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~----~~~~~~~~~~~~h~~~v~~~~~~p--~~~~~l~s 149 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV----LPLREPVITLEGHTKRVGIVAWHP--TAQNVLLS 149 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS----SCBCSCSEEEECCSSCEEEEEECS--SBTTEEEE
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc----cccCCceEEecCCCCeEEEEEECc--CCCCEEEE
Confidence 3568999999999999 9999999999999999999732100 000134677889999999999964 35 79999
Q ss_pred EECCCeEEEEeCCCCcEEEEEEe--cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccc-
Q psy2762 86 CSYDRKVIIWRGDNGNWFKYYEY--NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIG- 161 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~- 161 (318)
++.|++|++||+.+++.. ..+ ..|...|.+++|+|+ +.++++++.|+.|++||+.... ....+ ..|...
T Consensus 150 ~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~ 222 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAAV--LTLGPDVHPDTIYSVDWSRD--GALICTSCRDKRVRVIEPRKGT---VVAEKDRPHEGTR 222 (402)
T ss_dssp EETTSCEEEEETTTTEEE--EEECTTTCCSCEEEEEECTT--SSCEEEEETTSEEEEEETTTTE---EEEEEECSSCSSS
T ss_pred EcCCCEEEEEECCCCCcc--EEEecCCCCCceEEEEECCC--CCEEEEEecCCcEEEEeCCCCc---eeeeeccCCCCCc
Confidence 999999999999987643 345 679999999999998 6789999999999999975432 23444 567765
Q ss_pred cceeeeCCCCCCCccccccCCCCCCccceEEEe---cCCCeEEEEEccCCeE-EEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762 162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG---GCDNLIKIWKQEGDKW-IEETKLENHSDWVRDVAWAPSWGLSKC 237 (318)
Q Consensus 162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg---s~d~~i~iwd~~~~~~-~~~~~~~~h~~~V~~v~~sp~~~~~~~ 237 (318)
+..+.|+|+ +.+|++| +.|+.|++||+.+.+. ..... ..|...|.+++|+|+ +.
T Consensus 223 ~~~~~~~~~-----------------~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~----~~ 280 (402)
T 2aq5_A 223 PVHAVFVSE-----------------GKILTTGFSRMSERQVALWDTKHLEEPLSLQE-LDTSSGVLLPFFDPD----TN 280 (402)
T ss_dssp CCEEEECST-----------------TEEEEEEECTTCCEEEEEEETTBCSSCSEEEE-CCCCSSCEEEEEETT----TT
T ss_pred ceEEEEcCC-----------------CcEEEEeccCCCCceEEEEcCccccCCceEEe-ccCCCceeEEEEcCC----CC
Confidence 789999996 4688998 8999999999876532 22222 356778999999996 66
Q ss_pred EEE-EEeCCCeEEEEEcCCCcceeeEEeee--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 238 MIA-SCSQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 238 ~l~-s~s~D~~i~vw~~~~~~~~~~~~~~~--~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
+|+ +++.|+.|++|++...... ...+.. +..+|.+++|+|++.++++ .|+.+++|++..+ ..+++
T Consensus 281 ~l~~~g~~dg~i~i~d~~~~~~~-~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~-~~~~i 348 (402)
T 2aq5_A 281 IVYLCGKGDSSIRYFEITSEAPF-LHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHER-KCEPI 348 (402)
T ss_dssp EEEEEETTCSCEEEEEECSSTTC-EEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETT-EEEEE
T ss_pred EEEEEEcCCCeEEEEEecCCCcc-eEeecccccCCcccceEEeccccccee--cceeEEEEEcCCC-cEEEE
Confidence 675 5557999999999875421 222333 4589999999999998864 5679999998863 44443
No 80
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.2e-34 Score=253.85 Aligned_cols=222 Identities=25% Similarity=0.380 Sum_probs=173.7
Q ss_pred EEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEE
Q psy2762 60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS 139 (318)
Q Consensus 60 ~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~ 139 (318)
..+.+|.+.|++++|++ +|++||||+.|++|+|||+.++.......+.+|...|.+|+|+|+..+.+|++|+.|++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~--~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDY--YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp -------CCEEEEEECG--GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eecccccCeEEEeeEcC--CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 34678999999999974 5999999999999999999877554566788999999999998642256899999999999
Q ss_pred EEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEccc
Q psy2762 140 FLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLEN 218 (318)
Q Consensus 140 i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~~ 218 (318)
+||...+.. .....+.+|...|.+++|+|+. .+.+||+|+.|++|++||+..+ .+.....+.+
T Consensus 85 iWd~~~~~~-~~~~~~~~h~~~V~~v~~~p~~---------------~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~ 148 (316)
T 3bg1_A 85 IWREENGTW-EKSHEHAGHDSSVNSVCWAPHD---------------YGLILACGSSDGAISLLTYTGEGQWEVKKINNA 148 (316)
T ss_dssp EECCSSSCC-CEEEEECCCSSCCCEEEECCTT---------------TCSCEEEECSSSCEEEEEECSSSCEEECCBTTS
T ss_pred EEECCCCcc-eEEEEccCCCCceEEEEECCCC---------------CCcEEEEEcCCCCEEEEecCCCCCcceeeeecc
Confidence 999754321 1234456899999999999962 1357999999999999998765 2333456789
Q ss_pred CCCCeeEEEEccCCCC-------------CccEEEEEeCCCeEEEEEcCCCcce-eeEEeeecCCcEEEEEEcCCC----
Q psy2762 219 HSDWVRDVAWAPSWGL-------------SKCMIASCSQDRKVIIWTSNDYVTW-TPFIMNTFDDVVWNVSWSLTG---- 280 (318)
Q Consensus 219 h~~~V~~v~~sp~~~~-------------~~~~l~s~s~D~~i~vw~~~~~~~~-~~~~~~~~~~~v~~v~~spdg---- 280 (318)
|...|.+++|+|+... .+.+|++++.|++|+||+......+ ....+.+|.++|.+++|+|++
T Consensus 149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~ 228 (316)
T 3bg1_A 149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPT 228 (316)
T ss_dssp SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSC
T ss_pred ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCC
Confidence 9999999999996311 1468999999999999998654222 233456789999999999997
Q ss_pred CEEEEEeCCCeEEEEEECC
Q psy2762 281 DILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 281 ~~l~s~~~D~~v~iW~~~~ 299 (318)
++||+++.|++|+||+.+.
T Consensus 229 ~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 229 STIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CEEEEEETTCEEEEEECSS
T ss_pred ceEEEEcCCCeEEEEEccC
Confidence 8999999999999999875
No 81
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-34 Score=260.97 Aligned_cols=255 Identities=12% Similarity=0.120 Sum_probs=191.3
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc------------cccCeEEEEecCCC
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG------------HSGPVWQVAWAHPQ 78 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~------------h~~~V~~v~~~~~~ 78 (318)
+|...|++++|+|++++|++|+.|++|+|||++.. ..++.+..+.+ +...+.++.+....
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHY--------QQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEE--------EETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccc--------cCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 69999999999999999999999999999998411 01222222222 44556666643223
Q ss_pred CCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-c
Q psy2762 79 FGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-A 157 (318)
Q Consensus 79 ~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~ 157 (318)
++.+|++++.|++|++||+.+++.........|...|.+++|+|+ +.++++|+.|+.|++||+.... ....+. .
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~ 255 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEE--CCVLILGTTRGIIDIWDIRFNV---LIRSWSFG 255 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTT--SCEEEEEETTSCEEEEETTTTE---EEEEEBCT
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCC--CCEEEEEcCCCeEEEEEcCCcc---EEEEEecC
Confidence 689999999999999999988875444332228899999999998 7799999999999999985432 233443 6
Q ss_pred cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE----------------------
Q psy2762 158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK---------------------- 215 (318)
Q Consensus 158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~---------------------- 215 (318)
|..+|.++.|+|... ..+.+|++|+.|++|+|||+.+++......
T Consensus 256 ~~~~v~~~~~~~~~s-------------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 322 (437)
T 3gre_A 256 DHAPITHVEVCQFYG-------------KNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELN 322 (437)
T ss_dssp TCEEEEEEEECTTTC-------------TTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCC
T ss_pred CCCceEEEEeccccC-------------CCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccce
Confidence 777899998877421 115689999999999999998876433322
Q ss_pred ccc--CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE---------------------Ee--------
Q psy2762 216 LEN--HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF---------------------IM-------- 264 (318)
Q Consensus 216 ~~~--h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~---------------------~~-------- 264 (318)
+.+ |...|++++|++ +.+|++++.|+.|++||+.+....... ..
T Consensus 323 ~~~~~~~~~v~~l~~~~-----~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (437)
T 3gre_A 323 FCGIRSLNALSTISVSN-----DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTST 397 (437)
T ss_dssp CCCCCSGGGGCCEEEET-----TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----
T ss_pred ecccccCCceEEEEECC-----ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccc
Confidence 122 667788888884 579999999999999998875421110 00
Q ss_pred ------eecCCcEEEEEEcCC--CCEEEEEeCCCeEEEEE
Q psy2762 265 ------NTFDDVVWNVSWSLT--GDILTVSCGDNSVSLWK 296 (318)
Q Consensus 265 ------~~~~~~v~~v~~spd--g~~l~s~~~D~~v~iW~ 296 (318)
..|.+.|.+++|+++ +.+|+||+.||.|+||+
T Consensus 398 ~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 398 HSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ---------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 127889999999998 88999999999999995
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-33 Score=253.52 Aligned_cols=250 Identities=19% Similarity=0.268 Sum_probs=195.1
Q ss_pred CCCcceeeeeeecCCCC-EEEEeeCCCcEEEEEc----CCCcCCCCCCCCcceEEEEecc----------cccCeEEEEe
Q psy2762 10 TGHEDMIHDAEMDYLGL-YLATCSSDHTVKVFNL----DRNLKKDDSHSQKGTLIAELKG----------HSGPVWQVAW 74 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~----~~~~~~~~~~~~~~~~~~~~~~----------h~~~V~~v~~ 74 (318)
..|.+.|++++|+|+|+ +|++|+.|++|+|||+ ...... -.......+.. |.+.|++++|
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-----WKLTIIAELRHPFALSASSGKTTNQVTCLAW 116 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-----EEEEEEEEEECCCCCC------CBCEEEEEE
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-----ccccccccccccccccccccCCCCceEEEEE
Confidence 34669999999999999 9999999999999999 522000 00002333333 7889999999
Q ss_pred cCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762 75 AHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK 154 (318)
Q Consensus 75 ~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~ 154 (318)
++ ++++|++++.|+.|++||.. +. ....+..|...|.+++|+|+ +.++++++.|+.|++|++.... ....
T Consensus 117 s~--~~~~l~~~~~dg~i~i~~~~-~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~---~~~~ 186 (425)
T 1r5m_A 117 SH--DGNSIVTGVENGELRLWNKT-GA--LLNVLNFHRAPIVSVKWNKD--GTHIISMDVENVTILWNVISGT---VMQH 186 (425)
T ss_dssp CT--TSSEEEEEETTSCEEEEETT-SC--EEEEECCCCSCEEEEEECTT--SSEEEEEETTCCEEEEETTTTE---EEEE
T ss_pred cC--CCCEEEEEeCCCeEEEEeCC-CC--eeeeccCCCccEEEEEECCC--CCEEEEEecCCeEEEEECCCCc---EEEE
Confidence 74 58999999999999999943 44 34456789999999999998 6789999999999999974432 2333
Q ss_pred ecccccc---------------cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC
Q psy2762 155 IAAHTIG---------------CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH 219 (318)
Q Consensus 155 ~~~h~~~---------------v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h 219 (318)
+..+... +..+.|+|+ ..+++++.|+.|++||+..++. ...+.+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~g~i~~~d~~~~~~--~~~~~~~ 246 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDD------------------DKFVIPGPKGAIFVYQITEKTP--TGKLIGH 246 (425)
T ss_dssp ECCC---------------CCCBSCCEEEET------------------TEEEEECGGGCEEEEETTCSSC--SEEECCC
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCC------------------CEEEEEcCCCeEEEEEcCCCce--eeeeccC
Confidence 3444444 777777774 4689999999999999987753 3456789
Q ss_pred CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
...|++++|+|+ +.+|++++.|+.|++|++..... ...+..|...|.+++|+|++ +|++++.|+.|++||+..
T Consensus 247 ~~~i~~~~~~~~----~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~ 319 (425)
T 1r5m_A 247 HGPISVLEFNDT----NKLLLSASDDGTLRIWHGGNGNS--QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ 319 (425)
T ss_dssp SSCEEEEEEETT----TTEEEEEETTSCEEEECSSSBSC--SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT
T ss_pred CCceEEEEECCC----CCEEEEEcCCCEEEEEECCCCcc--ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC
Confidence 999999999996 77999999999999999876542 34456688899999999999 999999999999999876
Q ss_pred CC
Q psy2762 300 DG 301 (318)
Q Consensus 300 ~~ 301 (318)
+.
T Consensus 320 ~~ 321 (425)
T 1r5m_A 320 NT 321 (425)
T ss_dssp TE
T ss_pred Cc
Confidence 53
No 83
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.5e-33 Score=255.77 Aligned_cols=223 Identities=22% Similarity=0.300 Sum_probs=183.3
Q ss_pred ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD 135 (318)
Q Consensus 56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d 135 (318)
..+..++++|.+.|++++|++ ++++|+||+.|++|+|||+.+++. ...+..|...|.+++|+|+ +.++++|+.|
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp--~~~~l~s~s~D~~v~iWd~~~~~~--~~~~~~h~~~v~~~~~s~~--g~~las~~~d 129 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTP--EKNWIVSASQDGRLIVWNALTSQK--THAIKLHCPWVMECAFAPN--GQSVACGGLD 129 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECT--TSSCEEEEETTSEEEEEETTTTEE--EEEEECCCTTCCCCEECTT--SSEEEECCSS
T ss_pred eEEeecccccccEEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCcc--ceEEecCCCCEEEEEECCC--CCEEEEeeCC
Confidence 467789999999999999974 589999999999999999988764 4456789999999999998 7899999999
Q ss_pred CeEEEEEeecCCC---Cc-ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762 136 GTISFLTYMSDTN---SW-ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI 211 (318)
Q Consensus 136 ~~i~i~~~~~~~~---~~-~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~ 211 (318)
+.|++|++..... .. ....+.+|...+..+.|.|+. ...|++|+.|++|++||+.+++..
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~----------------~~~l~s~s~D~~i~~wd~~~~~~~ 193 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQ----------------ETRLITGSGDQTCVLWDVTTGQRI 193 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSS----------------SSCEEEECTTSCEEEECTTTCCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCC----------------CCEEEEECCCCcEEEEEcCCCcEE
Confidence 9999999854221 11 123456899999999999863 246999999999999999887654
Q ss_pred EEEE---cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762 212 EETK---LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG 288 (318)
Q Consensus 212 ~~~~---~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~ 288 (318)
.... ..+|...|.+++|+|. ++.+|++|+.|++|++||+..... ....+.+|...|.+++|+|+|++|++++.
T Consensus 194 ~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~sgs~D~~v~~wd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 269 (380)
T 3iz6_a 194 SIFGSEFPSGHTADVLSLSINSL---NANMFISGSCDTTVRLWDLRITSR-AVRTYHGHEGDINSVKFFPDGQRFGTGSD 269 (380)
T ss_dssp EEECCCSSSSCCSCEEEEEECSS---SCCEEEEEETTSCEEEEETTTTCC-CCEEECCCSSCCCEEEECTTSSEEEEECS
T ss_pred EEeecccCCCCccCeEEEEeecC---CCCEEEEEECCCeEEEEECCCCCc-ceEEECCcCCCeEEEEEecCCCeEEEEcC
Confidence 3321 1689999999999884 478999999999999999874321 23456789999999999999999999999
Q ss_pred CCeEEEEEECCCCceE
Q psy2762 289 DNSVSLWKENTDGAWQ 304 (318)
Q Consensus 289 D~~v~iW~~~~~~~~~ 304 (318)
|++|+|||+..+....
T Consensus 270 D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 270 DGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp SSCEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEE
Confidence 9999999988764443
No 84
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.3e-33 Score=251.33 Aligned_cols=204 Identities=23% Similarity=0.397 Sum_probs=173.9
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|.+.|.+++|+|++.+|++|+.|++|+|||++ .++.+.++.+|...|.++.|.+..++++|++|+
T Consensus 149 ~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~-----------~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 149 SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVE-----------SGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----------TCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC-----------CCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 345799999999999999999999999999999996 356788999999999999997544578999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccccccee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAV 165 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~ 165 (318)
.|++|++||+.+++. ...+.+|...|++++|+|+ +.++++++.|++|++||+.... ....+. .+..++..+
T Consensus 218 ~Dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~p~--~~~l~s~s~D~~v~lwd~~~~~---~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 218 CDKKAMVWDMRSGQC--VQAFETHESDVNSVRYYPS--GDAFASGSDDATCRLYDLRADR---EVAIYSKESIIFGASSV 290 (354)
T ss_dssp TTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCTTCCSCEEEE
T ss_pred CCCeEEEEECCCCcE--EEEecCCCCCeEEEEEeCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEcCCCcccceeEE
Confidence 999999999998874 4456789999999999998 6789999999999999975432 122222 233467889
Q ss_pred eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D 245 (318)
+|+|+ +.+|++|+.|++|+|||+.+++. ...+.+|...|++++|+|+ +.+|++++.|
T Consensus 291 ~~s~~-----------------g~~l~~g~~d~~i~vwd~~~~~~--~~~l~~h~~~v~~l~~spd----g~~l~sgs~D 347 (354)
T 2pbi_B 291 DFSLS-----------------GRLLFAGYNDYTINVWDVLKGSR--VSILFGHENRVSTLRVSPD----GTAFCSGSWD 347 (354)
T ss_dssp EECTT-----------------SSEEEEEETTSCEEEEETTTCSE--EEEECCCSSCEEEEEECTT----SSCEEEEETT
T ss_pred EEeCC-----------------CCEEEEEECCCcEEEEECCCCce--EEEEECCCCcEEEEEECCC----CCEEEEEcCC
Confidence 99997 57899999999999999987754 4567899999999999996 8899999999
Q ss_pred CeEEEEE
Q psy2762 246 RKVIIWT 252 (318)
Q Consensus 246 ~~i~vw~ 252 (318)
++|+||+
T Consensus 348 ~~v~vW~ 354 (354)
T 2pbi_B 348 HTLRVWA 354 (354)
T ss_dssp SEEEEEC
T ss_pred CCEEecC
Confidence 9999995
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-32 Score=247.97 Aligned_cols=245 Identities=22% Similarity=0.369 Sum_probs=199.1
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-cccCeEEEEecCCCCCcEEEEEEC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
.+|.+.+....+++++..+++++.|++|+|||+.. +.....+.. |.+.|++++|++ ++.+|++|+.
T Consensus 88 ~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~-----------~~~~~~~~~~~~~~v~~v~~s~--~~~~l~~~~~ 154 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADS-----------GSVSALAETDESTYVASVKWSH--DGSFLSVGLG 154 (401)
T ss_dssp TTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTT-----------CCEEEEEECCTTCCEEEEEECT--TSSEEEEEET
T ss_pred CCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCC-----------CcEeEeeecCCCCCEEEEEECC--CCCEEEEECC
Confidence 47777766656666667788999999999999973 344555554 899999999974 5899999999
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG 168 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 168 (318)
||.|++||+.+++. ...+.+|...|.+++|++ .++++++.|+.|++||+.... .....+.+|...+..++|+
T Consensus 155 dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 155 NGLVDIYDVESQTK--LRTMAGHQARVGCLSWNR----HVLSSGSRSGAIHHHDVRIAN--HQIGTLQGHSSEVCGLAWR 226 (401)
T ss_dssp TSCEEEEETTTCCE--EEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEEC
T ss_pred CCeEEEEECcCCeE--EEEecCCCCceEEEEECC----CEEEEEcCCCCEEEEecccCc--ceeeEEcCCCCCeeEEEEc
Confidence 99999999988764 445678999999999964 479999999999999985332 2345566899999999999
Q ss_pred CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe--CCC
Q psy2762 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS--QDR 246 (318)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s--~D~ 246 (318)
|+ +.+|++|+.|+.|++||+.+++. ...+.+|...|.+++|+|+ ...++++++ .|+
T Consensus 227 ~~-----------------~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~p~---~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 227 SD-----------------GLQLASGGNDNVVQIWDARSSIP--KFTKTNHNAAVKAVAWCPW---QSNLLATGGGTMDK 284 (401)
T ss_dssp TT-----------------SSEEEEEETTSCEEEEETTCSSE--EEEECCCSSCCCEEEECTT---STTEEEEECCTTTC
T ss_pred CC-----------------CCEEEEEeCCCeEEEccCCCCCc--cEEecCCcceEEEEEECCC---CCCEEEEecCCCCC
Confidence 96 46899999999999999987654 4557789999999999997 356788776 899
Q ss_pred eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEECCC
Q psy2762 247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC--GDNSVSLWKENTD 300 (318)
Q Consensus 247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~--~D~~v~iW~~~~~ 300 (318)
.|++||+..... .....+...|.+++|+|+|++|++++ .|+.|+||++..+
T Consensus 285 ~i~i~d~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 285 QIHFWNAATGAR---VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp EEEEEETTTCCE---EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred EEEEEECCCCCE---EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 999999987542 22234667899999999999999954 8999999998774
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.7e-32 Score=250.01 Aligned_cols=237 Identities=17% Similarity=0.281 Sum_probs=199.6
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
.+|...|+++.+ ++++|++|+.||+|+|||+. +++.+..+.+|.+.|.+++| ++++|++|+.|
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~-----------~~~~~~~~~~h~~~v~~l~~----~~~~l~sg~~d 192 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKN-----------TLECKRILTGHTGSVLCLQY----DERVIITGSSD 192 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESS-----------SCCEEEEECCCSSCEEEEEC----CSSEEEEEETT
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCC-----------CCeEEEEEcCCCCcEEEEEE----CCCEEEEEcCC
Confidence 467788998877 89999999999999999986 35678889999999999998 37899999999
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 169 (318)
|+|++||+.+++. ...+.+|...|.+++|++. ++++|+.|+.|++||+...........+.+|...+..+.|.
T Consensus 193 g~i~vwd~~~~~~--~~~~~~h~~~v~~l~~~~~----~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~- 265 (435)
T 1p22_A 193 STVRVWDVNTGEM--LNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD- 265 (435)
T ss_dssp SCEEEEESSSCCE--EEEECCCCSCEEEEECCTT----EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE-
T ss_pred CeEEEEECCCCcE--EEEEcCCCCcEEEEEEcCC----EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC-
Confidence 9999999998874 4456789999999999853 79999999999999986554322224456899999999884
Q ss_pred CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762 170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~ 249 (318)
+.+|++|+.|++|++||+.+++. ...+.+|...|.++.|+ +.+|++++.|++|+
T Consensus 266 ------------------~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~------~~~l~~g~~dg~i~ 319 (435)
T 1p22_A 266 ------------------DKYIVSASGDRTIKVWNTSTCEF--VRTLNGHKRGIACLQYR------DRLVVSGSSDNTIR 319 (435)
T ss_dssp ------------------TTEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEEE------TTEEEEEETTSCEE
T ss_pred ------------------CCEEEEEeCCCeEEEEECCcCcE--EEEEcCCCCcEEEEEeC------CCEEEEEeCCCeEE
Confidence 35899999999999999988764 45677999999999995 45899999999999
Q ss_pred EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
+||+.... ....+.+|...|.+++| ++++|++++.||+|++||+..+
T Consensus 320 iwd~~~~~--~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 320 LWDIECGA--CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp EEETTTCC--EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHH
T ss_pred EEECCCCC--EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCC
Confidence 99998754 24456678899999999 7899999999999999997553
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.4e-32 Score=262.63 Aligned_cols=255 Identities=17% Similarity=0.236 Sum_probs=209.4
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC-eEEEEecCCCCCcEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~~~~~~~~las~ 86 (318)
.-..|.+.|++++|+|+|++|++++ |+.|+|||++... .....+..+.+|.+. |++++|++-.++++||++
T Consensus 13 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~-------~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~ 84 (615)
T 1pgu_A 13 QPSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGD-------SKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG 84 (615)
T ss_dssp CCCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSC-------CSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEE
T ss_pred CCCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCC-------CccccceEEecCCCceEEEEEECcCCCCCEEEEe
Confidence 4567999999999999999999988 8999999986210 000457889999999 999999741148999999
Q ss_pred ECCCeEEEEeCCCC------cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeec
Q psy2762 87 SYDRKVIIWRGDNG------NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIA 156 (318)
Q Consensus 87 s~Dg~v~vWd~~~~------~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~ 156 (318)
+.||+|+|||+.++ .......+..|...|.+++|+|+ +.++++++.+ +.|.+|+. .. ....+.
T Consensus 85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~~~~~~~~v~~~d~--~~---~~~~~~ 157 (615)
T 1pgu_A 85 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCVVGEGRDNFGVFISWDS--GN---SLGEVS 157 (615)
T ss_dssp ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEECCSSCSEEEEETTT--CC---EEEECC
T ss_pred cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCC--CCEEEEeccCCCCccEEEEEEC--CC---cceeee
Confidence 99999999999654 33455567789999999999998 6788888887 68888862 21 345667
Q ss_pred ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCC---CeeEEEEccCCC
Q psy2762 157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD---WVRDVAWAPSWG 233 (318)
Q Consensus 157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~---~V~~v~~sp~~~ 233 (318)
+|...+..++|+|+. ...|++++.|+.|++||..+++. ...+.+|.. .|++++|+|+
T Consensus 158 ~~~~~v~~~~~~~~~----------------~~~l~~~~~d~~v~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~-- 217 (615)
T 1pgu_A 158 GHSQRINACHLKQSR----------------PMRSMTVGDDGSVVFYQGPPFKF--SASDRTHHKQGSFVRDVEFSPD-- 217 (615)
T ss_dssp SCSSCEEEEEECSSS----------------SCEEEEEETTTEEEEEETTTBEE--EEEECSSSCTTCCEEEEEECST--
T ss_pred cCCccEEEEEECCCC----------------CcEEEEEeCCCcEEEEeCCCcce--eeeecccCCCCceEEEEEECCC--
Confidence 899999999999973 13799999999999999887654 456788999 9999999994
Q ss_pred CCccEEEEEeCCCeEEEEEcCCCcceeeEEe-e---ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 234 LSKCMIASCSQDRKVIIWTSNDYVTWTPFIM-N---TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 234 ~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~-~---~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
++.+|++++.|+.|++||+.... ....+ . .|...|.+++|+ ++++|++++.|+.|++||...+.
T Consensus 218 -~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 218 -SGEFVITVGSDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp -TCCEEEEEETTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTE
T ss_pred -CCCEEEEEeCCCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCc
Confidence 27899999999999999987654 23334 4 788999999999 99999999999999999987653
No 88
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=7.4e-33 Score=252.59 Aligned_cols=261 Identities=14% Similarity=0.237 Sum_probs=201.4
Q ss_pred eeeeeeecCCCCE-EEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762 15 MIHDAEMDYLGLY-LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 15 ~v~~~~~~~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
....++++|+... +++++.||.|+||++..... ....+..+.+|.+.|++++|++ .++.+|++|+.||+|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~-------~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~s~dg~v~ 107 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGR-------VDKNVPLVCGHTAPVLDIAWCP-HNDNVIASGSEDCTVM 107 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEE-------CCTTCCCBCCCSSCEEEEEECT-TCTTEEEEEETTSEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCC-------CCCCCceEecCCCCEEEEEeCC-CCCCEEEEEeCCCeEE
Confidence 3445778887754 44588999999999863200 0012445789999999999974 3589999999999999
Q ss_pred EEeCCCCcE-----EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee--cccccccceee
Q psy2762 94 IWRGDNGNW-----FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI--AAHTIGCNAVS 166 (318)
Q Consensus 94 vWd~~~~~~-----~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~--~~h~~~v~~~~ 166 (318)
|||+.++.. .....+.+|...|.+++|+|+. ..++++++.|+.|++||+.... ....+ ..|...+.+++
T Consensus 108 vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~ 183 (402)
T 2aq5_A 108 VWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA-QNVLLSAGCDNVILVWDVGTGA---AVLTLGPDVHPDTIYSVD 183 (402)
T ss_dssp EEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB-TTEEEEEETTSCEEEEETTTTE---EEEEECTTTCCSCEEEEE
T ss_pred EEEccCCCCccccCCceEEecCCCCeEEEEEECcCC-CCEEEEEcCCCEEEEEECCCCC---ccEEEecCCCCCceEEEE
Confidence 999987621 1334567899999999999983 2589999999999999975432 34455 67999999999
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc-ccCCCC-eeEEEEccCCCCCccEEEEE--
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDW-VRDVAWAPSWGLSKCMIASC-- 242 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~-~~h~~~-V~~v~~sp~~~~~~~~l~s~-- 242 (318)
|+|+ +.+|++++.|+.|+|||+++++.. ..+ .+|... +.++.|+|+ +.+|+++
T Consensus 184 ~~~~-----------------~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~l~~g~~ 240 (402)
T 2aq5_A 184 WSRD-----------------GALICTSCRDKRVRVIEPRKGTVV--AEKDRPHEGTRPVHAVFVSE----GKILTTGFS 240 (402)
T ss_dssp ECTT-----------------SSCEEEEETTSEEEEEETTTTEEE--EEEECSSCSSSCCEEEECST----TEEEEEEEC
T ss_pred ECCC-----------------CCEEEEEecCCcEEEEeCCCCcee--eeeccCCCCCcceEEEEcCC----CcEEEEecc
Confidence 9996 468999999999999999887643 444 678766 899999996 7889998
Q ss_pred -eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCc-eEEEeeec
Q psy2762 243 -SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGA-WQCITEMG 310 (318)
Q Consensus 243 -s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~-~~~~~~~~ 310 (318)
+.|+.|++||+.............+...|..++|+|+|++|++++ .|+.|++|++..+.. ...+..+.
T Consensus 241 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~ 311 (402)
T 2aq5_A 241 RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS 311 (402)
T ss_dssp TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC
T ss_pred CCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc
Confidence 799999999997754211122224567899999999999997555 799999999988764 55555544
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.9e-33 Score=284.57 Aligned_cols=272 Identities=20% Similarity=0.319 Sum_probs=208.2
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|.+.|++++|+|+|++|++|+.|++|+|||+. +++.+.++.+|.+.|++++|+++.++.++++|+
T Consensus 652 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~ 720 (1249)
T 3sfz_A 652 DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA-----------TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS 720 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----------TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEE
T ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC-----------CCceEEEEcCCCCcEEEEEEecCCCceEEEEEe
Confidence 346899999999999999999999999999999996 356788999999999999998654577999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee--e--------ecc
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR--K--------IAA 157 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~--~--------~~~ 157 (318)
.|++|++||+.++.. ...+.+|...|.+++|+|+ +.++++++.|+.|++||+.......... . ...
T Consensus 721 ~d~~v~vwd~~~~~~--~~~~~~h~~~v~~~~~sp~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1249)
T 3sfz_A 721 NDFFLKLWDLNQKEC--RNTMFGHTNSVNHCRFSPD--DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPED 796 (1249)
T ss_dssp TTSCEEEEETTSSSE--EEEECCCSSCEEEEEECSS--TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------C
T ss_pred CCCeEEEEECCCcch--hheecCCCCCEEEEEEecC--CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcccc
Confidence 999999999998874 4456789999999999998 6789999999999999975442100000 0 001
Q ss_pred cccccceeeeCCCCCCCcc--------cccc----------C-------CCCCCccceEEEecCCCeEEEEEccCCeEEE
Q psy2762 158 HTIGCNAVSWGPGIGSLSE--------LDLK----------G-------SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE 212 (318)
Q Consensus 158 h~~~v~~~~~~p~~~~~~~--------~~~~----------~-------~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~ 212 (318)
+...+.+++|+|+...+.. .+.. . ..+...+.++++++.|+.|++||..++..
T Consensus 797 ~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~-- 874 (1249)
T 3sfz_A 797 VEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK-- 874 (1249)
T ss_dssp CCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE--
T ss_pred ccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--
Confidence 1224556667665321100 0000 0 01112257899999999999999988754
Q ss_pred EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-----------------------------------
Q psy2762 213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV----------------------------------- 257 (318)
Q Consensus 213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~----------------------------------- 257 (318)
...+.+|...|++++|+|+ +.+|++++.|++|++|+.....
T Consensus 875 ~~~~~~h~~~v~~v~~spd----g~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 950 (1249)
T 3sfz_A 875 VADCRGHLSWVHGVMFSPD----GSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIA 950 (1249)
T ss_dssp EEEECCCSSCEEEEEECTT----SSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEE
T ss_pred eeecCCCccceEEEEECCC----CCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEe
Confidence 4667899999999999996 7899999999999999853200
Q ss_pred ------------------------------------------ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy2762 258 ------------------------------------------TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295 (318)
Q Consensus 258 ------------------------------------------~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW 295 (318)
......+..|...|.+++|+|+|++|++++.|++|++|
T Consensus 951 ~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vw 1030 (1249)
T 3sfz_A 951 GKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVW 1030 (1249)
T ss_dssp ESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEE
T ss_pred cCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 00011233567789999999999999999999999999
Q ss_pred EECCC
Q psy2762 296 KENTD 300 (318)
Q Consensus 296 ~~~~~ 300 (318)
+...+
T Consensus 1031 d~~~~ 1035 (1249)
T 3sfz_A 1031 NWQTG 1035 (1249)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 97664
No 90
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-32 Score=250.47 Aligned_cols=271 Identities=11% Similarity=0.056 Sum_probs=200.2
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCc---CC-----CCC---------C----------CC-----------
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNL---KK-----DDS---------H----------SQ----------- 54 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~---~~-----~~~---------~----------~~----------- 54 (318)
..++.+++|+|+|++|+++ .++.|++||+..+. .. ... . ..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4578999999999977765 58899999986442 00 000 0 00
Q ss_pred --------cceEEEEecccccCeEEEEecCCCCCcEE-EEEECCCeEEEEeCC--CCcEEEEEEecCCCcCeEEEEeeCC
Q psy2762 55 --------KGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWAPK 123 (318)
Q Consensus 55 --------~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~Dg~v~vWd~~--~~~~~~~~~~~~h~~~v~~v~~~p~ 123 (318)
.........+|.+.|++++|++ ++++| ++++.|++|+|||+. ++..........|...|.+++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTS--DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp -----------------CCCCCEEEEEECT--TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcC--CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 0000112235667899999974 47885 999999999999998 6665554443467889999999998
Q ss_pred CCCcEEEEeecCCeEEEEEeecCCCCc-ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEE
Q psy2762 124 EFGLILACGSSDGTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI 202 (318)
Q Consensus 124 ~~~~~lasgs~d~~i~i~~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~i 202 (318)
+.+|++++.|+.|.+|++....... ....+.+|...+.+++|+|+.. .+.+|++|+.|++|+|
T Consensus 161 --~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~--------------~~~~l~s~~~d~~i~v 224 (450)
T 2vdu_B 161 --DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSD--------------GHQFIITSDRDEHIKI 224 (450)
T ss_dssp --SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTT--------------SCEEEEEEETTSCEEE
T ss_pred --CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCC--------------CCcEEEEEcCCCcEEE
Confidence 6789999999999999975543221 2224568999999999999610 0368999999999999
Q ss_pred EEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee-----------------
Q psy2762 203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN----------------- 265 (318)
Q Consensus 203 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~----------------- 265 (318)
||+.+++... ..+.+|...|++++|+ + +.+|++++.|++|+|||+...... ..+.
T Consensus 225 wd~~~~~~~~-~~~~~h~~~v~~~~~s-d----~~~l~s~~~d~~v~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 296 (450)
T 2vdu_B 225 SHYPQCFIVD-KWLFGHKHFVSSICCG-K----DYLLLSAGGDDKIFAWDWKTGKNL--STFDYNSLIKPYLNDQHLAPP 296 (450)
T ss_dssp EEESCTTCEE-EECCCCSSCEEEEEEC-S----TTEEEEEESSSEEEEEETTTCCEE--EEEECHHHHGGGCCTTSBC--
T ss_pred EECCCCceee-eeecCCCCceEEEEEC-C----CCEEEEEeCCCeEEEEECCCCcEe--eeecchhhhhhhhhhcccccc
Confidence 9998775432 2256899999999999 6 789999999999999999875421 1121
Q ss_pred --------ecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEE--CCCCceEEEeeec
Q psy2762 266 --------TFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKE--NTDGAWQCITEMG 310 (318)
Q Consensus 266 --------~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~--~~~~~~~~~~~~~ 310 (318)
.....|.+++|+|++++|++++ .|+.|+||++ ..++.+.++..+.
T Consensus 297 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~ 352 (450)
T 2vdu_B 297 RFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT 352 (450)
T ss_dssp --------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE
T ss_pred cccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec
Confidence 2235699999999999999999 8999999999 5666667666554
No 91
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.4e-32 Score=253.52 Aligned_cols=242 Identities=22% Similarity=0.346 Sum_probs=197.9
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|.+.|.+++| ++++|++|+.||+|+|||+. .++.+.++.+|.+.|.+++|+ +.+|++|+
T Consensus 168 ~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~l~~~----~~~l~s~s 230 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN-----------TGEMLNTLIHHCEAVLHLRFN----NGMMVTCS 230 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS-----------SCCEEEEECCCCSCEEEEECC----TTEEEEEE
T ss_pred EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC-----------CCcEEEEEcCCCCcEEEEEEc----CCEEEEee
Confidence 45689999999998 88999999999999999996 356788999999999999994 46999999
Q ss_pred CCCeEEEEeCCCCcEE-EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762 88 YDRKVIIWRGDNGNWF-KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS 166 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~ 166 (318)
.|++|++||+.++... ....+.+|...|.+++|. +.++++|+.|+.|++||..... ....+.+|...+.++.
T Consensus 231 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~ 303 (435)
T 1p22_A 231 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWNTSTCE---FVRTLNGHKRGIACLQ 303 (435)
T ss_dssp TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEE
T ss_pred CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC----CCEEEEEeCCCeEEEEECCcCc---EEEEEcCCCCcEEEEE
Confidence 9999999999876532 234567899999999994 4589999999999999975443 3455668888998888
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~ 246 (318)
|++ .+|++|+.|++|++||+.+++. ...+.+|...|.+++|. +.+|++++.|+
T Consensus 304 ~~~-------------------~~l~~g~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~------~~~l~sg~~dg 356 (435)
T 1p22_A 304 YRD-------------------RLVVSGSSDNTIRLWDIECGAC--LRVLEGHEELVRCIRFD------NKRIVSGAYDG 356 (435)
T ss_dssp EET-------------------TEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEECC------SSEEEEEETTS
T ss_pred eCC-------------------CEEEEEeCCCeEEEEECCCCCE--EEEEeCCcCcEEEEEec------CCEEEEEeCCC
Confidence 854 5799999999999999988764 45678999999999993 56899999999
Q ss_pred eEEEEEcCCCcc-------eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 247 KVIIWTSNDYVT-------WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 247 ~i~vw~~~~~~~-------~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
.|++||+..... .....+..|...|.+++| ++++|++++.||+|++||+..+..
T Consensus 357 ~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 357 KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred cEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 999999754321 023456678899999999 788999999999999999877543
No 92
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=9.5e-32 Score=236.74 Aligned_cols=212 Identities=25% Similarity=0.373 Sum_probs=180.3
Q ss_pred ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD 135 (318)
Q Consensus 56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d 135 (318)
..+..++.+|.+.|++++|++ ++++|++++.|++|++|+..+++.. ..+.+|...|.+++|+|+ +.++++++.|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~--~~~~l~s~~~dg~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~--~~~l~s~~~d 86 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSSD--SNLLVSASDD 86 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEE--EEECCCSSCEEEEEECTT--SSEEEEEETT
T ss_pred ceeEEEEcccCCcEEEEEECC--CCCEEEEeeCCCeEEEEeCCCcccc--hhhccCCCceEEEEEcCC--CCEEEEECCC
Confidence 456778999999999999974 5899999999999999999877643 356789999999999998 6789999999
Q ss_pred CeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE
Q psy2762 136 GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK 215 (318)
Q Consensus 136 ~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~ 215 (318)
+.|++||+.... ....+.+|...+..+.|+|+ +.+|++|+.|++|++||+.+++. ...
T Consensus 87 ~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~-----------------~~~l~s~~~d~~i~iwd~~~~~~--~~~ 144 (312)
T 4ery_A 87 KTLKIWDVSSGK---CLKTLKGHSNYVFCCNFNPQ-----------------SNLIVSGSFDESVRIWDVKTGKC--LKT 144 (312)
T ss_dssp SEEEEEETTTCC---EEEEEECCSSCEEEEEECSS-----------------SSEEEEEETTSCEEEEETTTCCE--EEE
T ss_pred CEEEEEECCCCc---EEEEEcCCCCCEEEEEEcCC-----------------CCEEEEEeCCCcEEEEECCCCEE--EEE
Confidence 999999975433 34566789999999999996 46899999999999999988754 456
Q ss_pred cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy2762 216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295 (318)
Q Consensus 216 ~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW 295 (318)
+..|...|.++.|+|+ +.+|++++.|+.|++||+..... .......+..++..++|+|+|++|++++.|+.|++|
T Consensus 145 ~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRD----GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 219 (312)
T ss_dssp ECCCSSCEEEEEECTT----SSEEEEEETTSCEEEEETTTCCE-EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred ecCCCCcEEEEEEcCC----CCEEEEEeCCCcEEEEECCCCce-eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 7889999999999996 78999999999999999987542 112223456689999999999999999999999999
Q ss_pred EECCC
Q psy2762 296 KENTD 300 (318)
Q Consensus 296 ~~~~~ 300 (318)
|+..+
T Consensus 220 d~~~~ 224 (312)
T 4ery_A 220 DYSKG 224 (312)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 98765
No 93
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-32 Score=272.74 Aligned_cols=164 Identities=10% Similarity=0.076 Sum_probs=127.4
Q ss_pred CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc-ceee--ec-----ccccccceeeeCCCCCCCccccccC
Q psy2762 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW-ESRK--IA-----AHTIGCNAVSWGPGIGSLSELDLKG 181 (318)
Q Consensus 110 ~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~-~~~~--~~-----~h~~~v~~~~~~p~~~~~~~~~~~~ 181 (318)
+|...+.+|+|+|+ +.++++|+.|++|++||+..+.... .... +. +|...|.+++|+|+
T Consensus 433 G~~~~v~sv~~spd--g~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspd----------- 499 (902)
T 2oaj_A 433 GGVRTKRQKLPAEY--GTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAE----------- 499 (902)
T ss_dssp CSBCCCCCCCCCSE--EEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETT-----------
T ss_pred CCcCCCCccccccc--CcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCC-----------
Confidence 34444555566776 6799999999999999986542110 0111 11 78889999999997
Q ss_pred CCCCCccceEEEecCCCeEEEEEccCCe-------------------------------------------EEEEEEccc
Q psy2762 182 SKLGGVAKRLVSGGCDNLIKIWKQEGDK-------------------------------------------WIEETKLEN 218 (318)
Q Consensus 182 ~~~~~~~~~lasgs~d~~i~iwd~~~~~-------------------------------------------~~~~~~~~~ 218 (318)
+++||+|+.|++|+|||+.+++ +.+...+.+
T Consensus 500 ------g~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 573 (902)
T 2oaj_A 500 ------TLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA 573 (902)
T ss_dssp ------TTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC
T ss_pred ------CCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc
Confidence 5789999999999999987652 123567889
Q ss_pred CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceee---EEe-eecCCcEEEEEEc-----CCC---CEEEEE
Q psy2762 219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTP---FIM-NTFDDVVWNVSWS-----LTG---DILTVS 286 (318)
Q Consensus 219 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~---~~~-~~~~~~v~~v~~s-----pdg---~~l~s~ 286 (318)
|...|++|+|||+ | +||+|+.|++|+|||+.+...... ..+ .+|.+.|++|+|+ ||| ++|+++
T Consensus 574 h~~~V~svafSpd----G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sg 648 (902)
T 2oaj_A 574 NKGKTSAINNSNI----G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCG 648 (902)
T ss_dssp CSCSEEEEEECBT----S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEE
T ss_pred CCCcEEEEEecCC----c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEE
Confidence 9999999999996 8 999999999999999876431100 012 2688899999999 886 899999
Q ss_pred eCCCeEEEEEE
Q psy2762 287 CGDNSVSLWKE 297 (318)
Q Consensus 287 ~~D~~v~iW~~ 297 (318)
+.|++|++|++
T Consensus 649 s~D~tv~~wd~ 659 (902)
T 2oaj_A 649 TDMGEVITYKI 659 (902)
T ss_dssp ETTSEEEEEEE
T ss_pred ecCCcEEEEEE
Confidence 99999999998
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.7e-31 Score=245.45 Aligned_cols=241 Identities=23% Similarity=0.414 Sum_probs=199.9
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...||.+.|.. +++++|++|++|+.||+|+|||+. .++.+.++.+|.+.|+++.|+ +++|++|+
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~~~~~----~~~l~s~~ 176 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAV-----------TGKCLRTLVGHTGGVWSSQMR----DNIIISGS 176 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETT-----------TCCEEEECCCCSSCEEEEEEE----TTEEEEEE
T ss_pred EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECC-----------CCcEEEEEcCCCCCEEEEEec----CCEEEEEe
Confidence 45799987643 356679999999999999999986 356788999999999999995 57999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.||+|++||+.+++ ....+.+|...|.+++|++. .+++|+.|++|++||+.... ....+.+|..++.++.|
T Consensus 177 ~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~----~l~s~s~dg~i~~wd~~~~~---~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 177 TDRTLKVWNAETGE--CIHTLYGHTSTVRCMHLHEK----RVVSGSRDATLRVWDIETGQ---CLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp TTSCEEEEETTTTE--EEEEECCCSSCEEEEEEETT----EEEEEETTSEEEEEESSSCC---EEEEEECCSSCEEEEEE
T ss_pred CCCeEEEEECCcCc--EEEEECCCCCcEEEEEecCC----EEEEEeCCCEEEEEECCCCc---EEEEEcCCcccEEEEEE
Confidence 99999999998876 34467789999999999753 69999999999999985443 34456689999999988
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 247 (318)
.. .+|++|+.|+.|++||+.+++. ...+.+|...|.++.|. +.+|++++.|++
T Consensus 248 ~~-------------------~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~ 300 (445)
T 2ovr_B 248 DG-------------------RRVVSGAYDFMVKVWDPETETC--LHTLQGHTNRVYSLQFD------GIHVVSGSLDTS 300 (445)
T ss_dssp CS-------------------SCEEEEETTSCEEEEEGGGTEE--EEEECCCSSCEEEEEEC------SSEEEEEETTSC
T ss_pred CC-------------------CEEEEEcCCCEEEEEECCCCcE--eEEecCCCCceEEEEEC------CCEEEEEeCCCe
Confidence 42 5799999999999999988764 45678999999999992 568999999999
Q ss_pred EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304 (318)
Q Consensus 248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~ 304 (318)
|++||+.... ....+..|...+..+++ ++++|++++.||.|++||+..+....
T Consensus 301 i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~ 353 (445)
T 2ovr_B 301 IRVWDVETGN--CIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQ 353 (445)
T ss_dssp EEEEETTTCC--EEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEECCCCC--EEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 9999998754 23455678888888777 56799999999999999987764433
No 95
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.7e-33 Score=255.87 Aligned_cols=214 Identities=15% Similarity=0.205 Sum_probs=173.4
Q ss_pred EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138 (318)
Q Consensus 59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i 138 (318)
......|...|++++|+ |.++.+||+|+.||+|+|||+..+.......+.+|.+.|++|+|+|.+ +.+|++++.|++|
T Consensus 112 ~~~~~~~~~~V~~l~~~-P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~-~~~l~s~s~D~~v 189 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWH-PTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLN-TNQFYASSMEGTT 189 (435)
T ss_dssp CCEEEECSSCEEEEEEC-SSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSC-TTEEEEECSSSCE
T ss_pred cccCCCCCCCEEEEEEe-CCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCC-CCEEEEEeCCCEE
Confidence 44567899999999995 556889999999999999999877655566677899999999999953 5689999999999
Q ss_pred EEEEeecCCCCcceeeec---ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE
Q psy2762 139 SFLTYMSDTNSWESRKIA---AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK 215 (318)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~ 215 (318)
++||+... ....+. .+...+.+++|+|+ +.+|++|+.||.|++||++++. ...
T Consensus 190 ~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~l~~g~~dg~i~~wd~~~~~---~~~ 245 (435)
T 4e54_B 190 RLQDFKGN----ILRVFASSDTINIWFCSLDVSAS-----------------SRMVVTGDNVGNVILLNMDGKE---LWN 245 (435)
T ss_dssp EEEETTSC----EEEEEECCSSCSCCCCCEEEETT-----------------TTEEEEECSSSBEEEEESSSCB---CCC
T ss_pred EEeeccCC----ceeEEeccCCCCccEEEEEECCC-----------------CCEEEEEeCCCcEeeeccCcce---eEE
Confidence 99997422 122222 23345678889986 4789999999999999987643 456
Q ss_pred cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce-eeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762 216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW-TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL 294 (318)
Q Consensus 216 ~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~-~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~i 294 (318)
+.+|...|++|+|+|+ ...+|++++.|++|+|||+...... ......+|...|.+++|+|||++|++++.|++|+|
T Consensus 246 ~~~h~~~v~~v~~~p~---~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~i 322 (435)
T 4e54_B 246 LRMHKKKVTHVALNPC---CDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRV 322 (435)
T ss_dssp SBCCSSCEEEEEECTT---CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEE
T ss_pred EecccceEEeeeecCC---CceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEE
Confidence 7899999999999997 3568999999999999998764321 11223568899999999999999999999999999
Q ss_pred EEECCCC
Q psy2762 295 WKENTDG 301 (318)
Q Consensus 295 W~~~~~~ 301 (318)
|++..+.
T Consensus 323 wd~~~~~ 329 (435)
T 4e54_B 323 YSASQWD 329 (435)
T ss_dssp EESSSSS
T ss_pred EECCCCc
Confidence 9987654
No 96
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.1e-31 Score=236.16 Aligned_cols=219 Identities=27% Similarity=0.410 Sum_probs=178.2
Q ss_pred cceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc---EEEEEEecCCCcCeEEEEeeCCCCCcEEEE
Q psy2762 55 KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN---WFKYYEYNNHDSSVNSIAWAPKEFGLILAC 131 (318)
Q Consensus 55 ~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~---~~~~~~~~~h~~~v~~v~~~p~~~~~~las 131 (318)
...+..+|+||.+.|++|+|++ ..+++|||||.|++|+|||+...+ ..+...+.+|...|.+++|+|+ +.++++
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp-~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d--g~~l~s 103 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTP-QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD--GQFALS 103 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECT-TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT--SSEEEE
T ss_pred ceEEEEEECCccCCEEEEEEeC-CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC--CCEEEE
Confidence 3456678999999999999964 457899999999999999987543 2355567899999999999998 779999
Q ss_pred eecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762 132 GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI 211 (318)
Q Consensus 132 gs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~ 211 (318)
++.|+.|++|+..... .......+...+....++|. +.+|++++.|+.+++||......
T Consensus 104 ~~~d~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----------------~~~l~s~s~d~~~~~~d~~~~~~- 162 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGT---TTRRFVGHTKDVLSVAFSSD-----------------NRQIVSGSRDKTIKLWNTLGVCK- 162 (340)
T ss_dssp EETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTT-----------------SSCEEEEETTSCEEEECTTSCEE-
T ss_pred EcccccceEEeecccc---eeeeecCCCCceeEEEEeec-----------------CccceeecCCCeEEEEEeCCCce-
Confidence 9999999999864322 22233355556667777775 46799999999999999876543
Q ss_pred EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCe
Q psy2762 212 EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNS 291 (318)
Q Consensus 212 ~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~ 291 (318)
....+.+|...|..++|+++. ...++++++.|++|++|+..... ....+.+|...|.+++|+|+|++|++++.|++
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~--~~~~~~s~~~d~~i~i~d~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNS--SNPIIVSCGWDKLVKVWNLANCK--LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCS--SSCEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEEeccccCcccceEEccCC--CCcEEEEEcCCCEEEEEECCCCc--eeeEecCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 445678899999999999863 35678999999999999998754 23456678999999999999999999999999
Q ss_pred EEEEEECCCC
Q psy2762 292 VSLWKENTDG 301 (318)
Q Consensus 292 v~iW~~~~~~ 301 (318)
|+|||++...
T Consensus 239 i~iwd~~~~~ 248 (340)
T 4aow_A 239 AMLWDLNEGK 248 (340)
T ss_dssp EEEEETTTTE
T ss_pred EEEEEeccCc
Confidence 9999987653
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.4e-31 Score=255.58 Aligned_cols=252 Identities=16% Similarity=0.266 Sum_probs=187.9
Q ss_pred ecCCCcc---eeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-c---ccccCeEEEEecCCCC
Q psy2762 8 VDTGHED---MIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-K---GHSGPVWQVAWAHPQF 79 (318)
Q Consensus 8 ~~~gH~~---~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~---~h~~~V~~v~~~~~~~ 79 (318)
...+|.. .|++++|+|+ +++|++++.|+.|++||+. .++.+..+ . +|.+.|.++.|+ +
T Consensus 198 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~---~ 263 (615)
T 1pgu_A 198 SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK-----------SGEFLKYIEDDQEPVQGGIFALSWL---D 263 (615)
T ss_dssp EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT-----------TCCEEEECCBTTBCCCSCEEEEEES---S
T ss_pred eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC-----------CCCEeEEecccccccCCceEEEEEc---C
Confidence 3467998 9999999999 9999999999999999986 34677788 6 899999999996 4
Q ss_pred CcEEEEEECCCeEEEEeCCCCcEEEE-------------------------------------------EEecCCCcCeE
Q psy2762 80 GTLLASCSYDRKVIIWRGDNGNWFKY-------------------------------------------YEYNNHDSSVN 116 (318)
Q Consensus 80 ~~~las~s~Dg~v~vWd~~~~~~~~~-------------------------------------------~~~~~h~~~v~ 116 (318)
+.+|++++.|+.|++||+.+++.... ..+.+|...|.
T Consensus 264 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~ 343 (615)
T 1pgu_A 264 SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGIT 343 (615)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEE
Confidence 89999999999999999876543222 12233444444
Q ss_pred EEEeeCC-------------------------------CCCcEEEEeecCCeEEEEEeecCCC-----------------
Q psy2762 117 SIAWAPK-------------------------------EFGLILACGSSDGTISFLTYMSDTN----------------- 148 (318)
Q Consensus 117 ~v~~~p~-------------------------------~~~~~lasgs~d~~i~i~~~~~~~~----------------- 148 (318)
+++| |+ ..+..+++++.|+.|++|++.....
T Consensus 344 ~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~ 422 (615)
T 1pgu_A 344 ALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAV 422 (615)
T ss_dssp EEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEE
T ss_pred EEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEE
Confidence 4444 22 0023456666666666665432100
Q ss_pred -------------Cc----------------------------------------ce--eeecccccccceeeeCCCCCC
Q psy2762 149 -------------SW----------------------------------------ES--RKIAAHTIGCNAVSWGPGIGS 173 (318)
Q Consensus 149 -------------~~----------------------------------------~~--~~~~~h~~~v~~~~~~p~~~~ 173 (318)
.. .. ..+..|...+.+++|+|+
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--- 499 (615)
T 1pgu_A 423 LTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS--- 499 (615)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTT---
T ss_pred EeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCC---
Confidence 00 00 111234444555555554
Q ss_pred CccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-CCCCeeEEEEcc----------CCCCCccEEEEE
Q psy2762 174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAP----------SWGLSKCMIASC 242 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~V~~v~~sp----------~~~~~~~~l~s~ 242 (318)
+.+|++++.|+.|+|||+.+++. ...+.+ |...|++++|+| + +.+|+++
T Consensus 500 --------------g~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~----~~~l~~~ 559 (615)
T 1pgu_A 500 --------------ETYIAAGDVMGKILLYDLQSREV--KTSRWAFRTSKINAISWKPAEKGANEEEIE----EDLVATG 559 (615)
T ss_dssp --------------SSEEEEEETTSCEEEEETTTTEE--EECCSCCCSSCEEEEEECCCC------CCS----CCEEEEE
T ss_pred --------------CCEEEEcCCCCeEEEeeCCCCcc--eeEeecCCCCceeEEEEcCccccccccccC----CCEEEEE
Confidence 57899999999999999988764 455677 999999999999 5 7899999
Q ss_pred eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
+.|++|++|++..... ....+.+|...|.+++|+|||+ |++++.|++|++|+++.
T Consensus 560 ~~dg~i~iw~~~~~~~-~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 560 SLDTNIFIYSVKRPMK-IIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ETTSCEEEEESSCTTC-CEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred cCCCcEEEEECCCCce-echhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 9999999999987521 2345678899999999999999 99999999999999875
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4e-32 Score=250.06 Aligned_cols=255 Identities=12% Similarity=0.194 Sum_probs=184.8
Q ss_pred ceeeeeeecCCC--CEEEEeeCCCcEEEEEcCCCcCCC---CCCCCc-------------------------ceEEEE-e
Q psy2762 14 DMIHDAEMDYLG--LYLATCSSDHTVKVFNLDRNLKKD---DSHSQK-------------------------GTLIAE-L 62 (318)
Q Consensus 14 ~~v~~~~~~~~g--~~l~s~s~D~~v~vwd~~~~~~~~---~~~~~~-------------------------~~~~~~-~ 62 (318)
+.|++++|+|++ .+|++++.|++|+|||+....... ...... ...... +
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 889999999998 899999999999999986311000 000000 011123 4
Q ss_pred cccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc-EEEEE-----EecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-WFKYY-----EYNNHDSSVNSIAWAPKEFGLILACGSSDG 136 (318)
Q Consensus 63 ~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~-~~~~~-----~~~~h~~~v~~v~~~p~~~~~~lasgs~d~ 136 (318)
.+|.+.|++++|++ ++++|++| .|++|++||+.... ..... .+.+|...|.+++|+|++ ..++++|+.|+
T Consensus 174 ~~h~~~v~~~~~~~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~dg 249 (447)
T 3dw8_B 174 NAHTYHINSISINS--DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNS-CNTFVYSSSKG 249 (447)
T ss_dssp SCCSSCCCEEEECT--TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSC-TTEEEEEETTS
T ss_pred cCCCcceEEEEEcC--CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCC-CcEEEEEeCCC
Confidence 68999999999974 58999998 89999999998432 22221 356799999999999983 27899999999
Q ss_pred eEEEEEeecCCCC-cceeeeccccc------------ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEE
Q psy2762 137 TISFLTYMSDTNS-WESRKIAAHTI------------GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW 203 (318)
Q Consensus 137 ~i~i~~~~~~~~~-~~~~~~~~h~~------------~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw 203 (318)
.|++||+...... .....+..|.. ++.+++|+|+ +.+|++++. +.|+||
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-----------------g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS-----------------GRYMMTRDY-LSVKVW 311 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTT-----------------SSEEEEEES-SEEEEE
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCC-----------------CCEEEEeeC-CeEEEE
Confidence 9999998654310 01234445654 8999999997 578999999 999999
Q ss_pred EccC-CeEEEEEEcccCCCC---------------eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEE----
Q psy2762 204 KQEG-DKWIEETKLENHSDW---------------VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI---- 263 (318)
Q Consensus 204 d~~~-~~~~~~~~~~~h~~~---------------V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~---- 263 (318)
|+.. +++ ...+.+|... +..++|+|+ +.+|++++.|+.|+|||+.+........
T Consensus 312 d~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~----~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~ 385 (447)
T 3dw8_B 312 DLNMENRP--VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGS----DSVVMTGSYNNFFRMFDRNTKRDITLEASREN 385 (447)
T ss_dssp ETTCCSSC--SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTT----SSEEEEECSTTEEEEEETTTCCEEEEECCSTT
T ss_pred eCCCCccc--cceeeccccccccccccccccccccceEEEECCC----CCEEEEeccCCEEEEEEcCCCcceeeeecccc
Confidence 9976 443 3455667532 234999996 8899999999999999988754211000
Q ss_pred --------------------------eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 264 --------------------------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 264 --------------------------~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
...+...|..++|+|+|++||+++.++ +.+|..
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 386 NKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred cccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 012345789999999999999888775 788864
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.4e-30 Score=240.61 Aligned_cols=242 Identities=20% Similarity=0.313 Sum_probs=201.4
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|.+.|.+++|+ +++|++|+.||+|++||+. .++.+.++.+|...|.++.|. ++.|++|+
T Consensus 154 ~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~~~~~----~~~l~s~s 216 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE-----------TGECIHTLYGHTSTVRCMHLH----EKRVVSGS 216 (445)
T ss_dssp ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEEE----TTEEEEEE
T ss_pred EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC-----------cCcEEEEECCCCCcEEEEEec----CCEEEEEe
Confidence 456899999999997 6799999999999999996 357788999999999999984 57899999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|++|++||+.+++. ...+.+|...|.+++|. +.++++++.|+.|++||..... ....+.+|...+.++.|
T Consensus 217 ~dg~i~~wd~~~~~~--~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 217 RDATLRVWDIETGQC--LHVLMGHVAAVRCVQYD----GRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp TTSEEEEEESSSCCE--EEEEECCSSCEEEEEEC----SSCEEEEETTSCEEEEEGGGTE---EEEEECCCSSCEEEEEE
T ss_pred CCCEEEEEECCCCcE--EEEEcCCcccEEEEEEC----CCEEEEEcCCCEEEEEECCCCc---EeEEecCCCCceEEEEE
Confidence 999999999988764 34567899999999993 4579999999999999975442 34456688889999988
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 247 (318)
. +.+|++++.|+.|++||+.+++. ...+.+|...+.++.+++ .+|++++.|+.
T Consensus 288 ~-------------------~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~ 340 (445)
T 2ovr_B 288 D-------------------GIHVVSGSLDTSIRVWDVETGNC--IHTLTGHQSLTSGMELKD------NILVSGNADST 340 (445)
T ss_dssp C-------------------SSEEEEEETTSCEEEEETTTCCE--EEEECCCCSCEEEEEEET------TEEEEEETTSC
T ss_pred C-------------------CCEEEEEeCCCeEEEEECCCCCE--EEEEcCCcccEEEEEEeC------CEEEEEeCCCe
Confidence 3 35899999999999999988764 456789999999988854 48999999999
Q ss_pred EEEEEcCCCcceeeEEeee---cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 248 VIIWTSNDYVTWTPFIMNT---FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 248 i~vw~~~~~~~~~~~~~~~---~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
|++||+..... ...+.. |...|.+++|+ +++|++++.||+|++|+...+.....+
T Consensus 341 i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 341 VKIWDIKTGQC--LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEEETTTCCE--EEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCcE--EEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeee
Confidence 99999976542 233333 77889999996 679999999999999998877555544
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=267.98 Aligned_cols=246 Identities=13% Similarity=0.124 Sum_probs=191.1
Q ss_pred cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
..||.+.|++++|+|++++||+|+.||+|+||+... ...+..+ .|...|++++|++ +++|+|++.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~-----------~~~~~~~-~~~~~V~~l~fsp---g~~L~S~s~ 77 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ-----------VEVVIKL-EDRSAIKEMRFVK---GIYLVVINA 77 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTT-----------CEEEEEC-SSCCCEEEEEEET---TTEEEEEET
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC-----------cEEEEEc-CCCCCEEEEEEcC---CCEEEEEEC
Confidence 358999999999999999999999999999999752 3334443 4889999999973 679999999
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCC-cce-------eeeccccc
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS-WES-------RKIAAHTI 160 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~-~~~-------~~~~~h~~ 160 (318)
|++|+|||+.+++....+ . |...|.+++|+|+ +.++++|+.||+|++||+...... ... ....+|..
T Consensus 78 D~~v~lWd~~~~~~~~~~--~-~~~~V~~v~~sp~--g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 78 KDTVYVLSLYSQKVLTTV--F-VPGKITSIDTDAS--LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp TCEEEEEETTTCSEEEEE--E-CSSCEEEEECCTT--CSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred cCeEEEEECCCCcEEEEE--c-CCCCEEEEEECCC--CCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCC
Confidence 999999999988754443 3 6688999999998 779999999999999997433210 000 12357889
Q ss_pred ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc------------------CCCC
Q psy2762 161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN------------------HSDW 222 (318)
Q Consensus 161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~------------------h~~~ 222 (318)
+|.+++|+|+. ...|++|+.|++| |||+++++... .+.. |...
T Consensus 153 ~V~sl~~sp~~----------------~~~l~~g~~dg~v-lWd~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~h~~~ 213 (902)
T 2oaj_A 153 PIVSIQWNPRD----------------IGTVLISYEYVTL-TYSLVENEIKQ--SFIYELPPFAPGGDFSEKTNEKRTPK 213 (902)
T ss_dssp CCCEEEEETTE----------------EEEEEEECSSCEE-EEETTTTEEEE--EECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred CeEEEEEccCC----------------CCEEEEEeCCCcE-EEECCCCceEE--EEecccCCcCCCcccccccccccCCC
Confidence 99999999952 3579999999999 99998876543 3333 3578
Q ss_pred eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe---e-------------ecCCcEEEEEEc----CCC-C
Q psy2762 223 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM---N-------------TFDDVVWNVSWS----LTG-D 281 (318)
Q Consensus 223 V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~---~-------------~~~~~v~~v~~s----pdg-~ 281 (318)
|++++|+|+ +.+|++++.|++|+|||+.+........+ . .+..+|.+++|+ ||+ .
T Consensus 214 V~~v~fspd----g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ 289 (902)
T 2oaj_A 214 VIQSLYHPN----SLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTS 289 (902)
T ss_dssp EEEEEECTT----SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEE
T ss_pred eEEEEEcCC----CCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCE
Confidence 999999996 88999999999999999977532111011 0 124579999995 554 5
Q ss_pred EEEEEeCCC-----eEEEEEE
Q psy2762 282 ILTVSCGDN-----SVSLWKE 297 (318)
Q Consensus 282 ~l~s~~~D~-----~v~iW~~ 297 (318)
+|++++.|. ++++|+.
T Consensus 290 ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 290 LLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEEECSTTSSCCCEEEEEE
T ss_pred EEEeCCCCCCCCCceEEEEec
Confidence 677777763 7889985
No 101
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9e-32 Score=243.02 Aligned_cols=206 Identities=15% Similarity=0.129 Sum_probs=163.5
Q ss_pred CCcceeeeeeecCCCCEEEE--eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 11 GHEDMIHDAEMDYLGLYLAT--CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s--~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
.+...+.+++|+|||++|++ ++.|++|+|||+. .+..+..+. |.+.|++++|++ +|++|++++.
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~-----------~~~~~~~~~-~~~~V~~v~fsp--dg~~l~s~s~ 196 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPS-----------DLTEKFEIE-TRGEVKDLHFST--DGKVVAYITG 196 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETT-----------TTEEEEEEE-CSSCCCEEEECT--TSSEEEEECS
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECC-----------CCcEEEEeC-CCCceEEEEEcc--CCceEEeccc
Confidence 45667899999999999764 5579999999986 345666664 888999999974 5999999986
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC----eEEEEEeecCCCC-cceeeecccccccc
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG----TISFLTYMSDTNS-WESRKIAAHTIGCN 163 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~----~i~i~~~~~~~~~-~~~~~~~~h~~~v~ 163 (318)
|+ +++|+..++..........|...|.+++|+|+ +.++++++.|+ .+++|+....... .....+.+|..+|.
T Consensus 197 ~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd--g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 197 SS-LEVISTVTGSCIARKTDFDKNWSLSKINFIAD--DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGIT 273 (365)
T ss_dssp SC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEET--TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEE
T ss_pred ee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCC--CCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeE
Confidence 65 55555555554444445678899999999998 77888888887 5777876543211 11234568889999
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 243 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s 243 (318)
+++|+|+ +++||+|+.|++|+|||++++++.. ..+.+|..+|++|+|||+ +.+|||+|
T Consensus 274 ~~~~Spd-----------------g~~lasgs~D~~V~iwd~~~~~~~~-~~~~gH~~~V~~v~fSpd----g~~laS~S 331 (365)
T 4h5i_A 274 SMDVDMK-----------------GELAVLASNDNSIALVKLKDLSMSK-IFKQAHSFAITEVTISPD----STYVASVS 331 (365)
T ss_dssp EEEECTT-----------------SCEEEEEETTSCEEEEETTTTEEEE-EETTSSSSCEEEEEECTT----SCEEEEEE
T ss_pred eEEECCC-----------------CCceEEEcCCCEEEEEECCCCcEEE-EecCcccCCEEEEEECCC----CCEEEEEe
Confidence 9999997 5799999999999999999886532 235899999999999996 89999999
Q ss_pred CCCeEEEEEcCC
Q psy2762 244 QDRKVIIWTSND 255 (318)
Q Consensus 244 ~D~~i~vw~~~~ 255 (318)
.|++||||++..
T Consensus 332 ~D~tvrvw~ip~ 343 (365)
T 4h5i_A 332 AANTIHIIKLPL 343 (365)
T ss_dssp TTSEEEEEECCT
T ss_pred CCCeEEEEEcCC
Confidence 999999999864
No 102
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-31 Score=239.24 Aligned_cols=227 Identities=21% Similarity=0.332 Sum_probs=182.3
Q ss_pred eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG 136 (318)
Q Consensus 57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~ 136 (318)
+++..+.+|.+.|++++|++ ++++||+|+.||+|+|||+..........+.+|...|.+++|+|+..+.++++++.|+
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ---CCEEECCCCEEEEEECS--SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CccEEecCCcccEEEEEEcC--CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 34667889999999999974 5899999999999999999865555666778899999999999764467899999999
Q ss_pred eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc
Q psy2762 137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL 216 (318)
Q Consensus 137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~ 216 (318)
.|++|++..... .....+..|..++.+++|+|+. .+.+|++++.|+.|++||+..+.......+
T Consensus 80 ~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~---------------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 143 (379)
T 3jrp_A 80 KVLIWKEENGRW-SQIAVHAVHSASVNSVQWAPHE---------------YGPLLLVASSDGKVSVVEFKENGTTSPIII 143 (379)
T ss_dssp CEEEEEEETTEE-EEEEEECCCSSCEEEEEECCGG---------------GCSEEEEEETTSEEEEEECCTTSCCCEEEE
T ss_pred EEEEEEcCCCce-eEeeeecCCCcceEEEEeCCCC---------------CCCEEEEecCCCcEEEEecCCCCceeeEEe
Confidence 999999865421 1234455788999999999962 035899999999999999887643344567
Q ss_pred ccCCCCeeEEEEccCCC---------CCccEEEEEeCCCeEEEEEcCCCcce--eeEEeeecCCcEEEEEEcCC---CCE
Q psy2762 217 ENHSDWVRDVAWAPSWG---------LSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLT---GDI 282 (318)
Q Consensus 217 ~~h~~~V~~v~~sp~~~---------~~~~~l~s~s~D~~i~vw~~~~~~~~--~~~~~~~~~~~v~~v~~spd---g~~ 282 (318)
.+|...|++++|+|... .++.+|++++.|+.|++||+...... ....+..|...|.+++|+|+ +++
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 223 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence 78999999999999310 02779999999999999998764321 12345578899999999999 899
Q ss_pred EEEEeCCCeEEEEEECCCC
Q psy2762 283 LTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 283 l~s~~~D~~v~iW~~~~~~ 301 (318)
|++++.||.|+||+++.+.
T Consensus 224 l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp EEEEETTSCEEEEEESSTT
T ss_pred EEEEeCCCEEEEEeCCCCC
Confidence 9999999999999998754
No 103
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.3e-31 Score=260.27 Aligned_cols=251 Identities=22% Similarity=0.273 Sum_probs=205.3
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...+|...|++++|+|++++|++|+.||+|+|||+. .+..+.++.+|.+.|++++|++ ++.+|++++
T Consensus 50 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~-----------~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~ 116 (814)
T 3mkq_A 50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-----------TGEKVVDFEAHPDYIRSIAVHP--TKPYVLSGS 116 (814)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-----------TCCEEEEEECCSSCEEEEEECS--SSSEEEEEE
T ss_pred EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC-----------CCcEEEEEecCCCCEEEEEEeC--CCCEEEEEc
Confidence 345899999999999999999999999999999986 3567888999999999999974 589999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVS 166 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~ 166 (318)
.||+|++||+.++.. ....+.+|...|.+++|+|++ +.++++++.|+.|++|+...... ...+. .|..++..++
T Consensus 117 ~dg~i~vw~~~~~~~-~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~~~v~~~~ 191 (814)
T 3mkq_A 117 DDLTVKLWNWENNWA-LEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQSTP---NFTLTTGQERGVNYVD 191 (814)
T ss_dssp TTSEEEEEEGGGTSE-EEEEEECCSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCSSC---SEEEECCCTTCCCEEE
T ss_pred CCCEEEEEECCCCce-EEEEEcCCCCcEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcc---eeEEecCCCCCEEEEE
Confidence 999999999987632 344567899999999999932 67899999999999999754332 22333 4457899999
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~ 246 (318)
|+|.. .+.+|++++.|+.|++||..+++. ...+.+|...|.+++|+|+ +.+|++++.|+
T Consensus 192 ~~~~~---------------~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg 250 (814)
T 3mkq_A 192 YYPLP---------------DKPYMITASDDLTIKIWDYQTKSC--VATLEGHMSNVSFAVFHPT----LPIIISGSEDG 250 (814)
T ss_dssp ECCST---------------TCCEEEEECTTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSS----SSEEEEEETTS
T ss_pred EEECC---------------CCCEEEEEeCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCC----CCEEEEEeCCC
Confidence 99831 146899999999999999988764 4566789999999999996 78999999999
Q ss_pred eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCE-EEEEeCCCeEEEEEECC
Q psy2762 247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDI-LTVSCGDNSVSLWKENT 299 (318)
Q Consensus 247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~-l~s~~~D~~v~iW~~~~ 299 (318)
.|++|+..+.. ....+..+...|++++|+|+|+. +++++.|+.+.+|+...
T Consensus 251 ~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 251 TLKIWNSSTYK--VEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp CEEEEETTTCS--EEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred eEEEEECCCCc--EEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 99999998754 23445567789999999999973 23444577889998654
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4.9e-31 Score=237.24 Aligned_cols=250 Identities=14% Similarity=0.130 Sum_probs=179.4
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE-EEEEC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSY 88 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~ 88 (318)
.+|...|++++|+|+|++|++|+.| .++|||++. +..+... +...+..+.+.+. ++.+ ++++.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~-----------~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~ 79 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHP-----------VAHIMSQ--EMRHLSKVRMLHR--TNYVAFVTGV 79 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSS-EEEEEEETT-----------EEEEEEE--ECSCCCEEEECTT--SSEEEEECSS
T ss_pred ccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCC-----------cceeeee--ecCCeEEEEEcCC--CCEEEEEECC
Confidence 6899999999999999999998866 589999862 3333332 2234677777643 4444 67888
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCC---------------CC------------------cEEEE--ee
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE---------------FG------------------LILAC--GS 133 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~---------------~~------------------~~las--gs 133 (318)
|++|+|||..+++.... +. |...|.+++|+++. .+ .++++ |+
T Consensus 80 d~~v~iWd~~~~~~~~~--~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~ 156 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSR--IK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEF 156 (355)
T ss_dssp TTEEEEEETTTTEEEEE--EE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESS
T ss_pred ccEEEEEECCCCcEEEE--EE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCC
Confidence 99999999988865443 33 56789999888751 00 12222 56
Q ss_pred cCCeEEEEEeecCCC------C------cc-eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCe-
Q psy2762 134 SDGTISFLTYMSDTN------S------WE-SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNL- 199 (318)
Q Consensus 134 ~d~~i~i~~~~~~~~------~------~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~- 199 (318)
.||.|++||+..... . .. ...+.+|..+|.+++|+|+ +.+||+|+.|++
T Consensus 157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-----------------g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-----------------SDMVATCSQDGTI 219 (355)
T ss_dssp CTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-----------------SSEEEEEETTCSE
T ss_pred cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-----------------CCEEEEEeCCCCE
Confidence 777888887643220 0 00 3456689999999999997 578999999998
Q ss_pred EEEEEccCCeEEEEEEcc-c-CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe-------------
Q psy2762 200 IKIWKQEGDKWIEETKLE-N-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM------------- 264 (318)
Q Consensus 200 i~iwd~~~~~~~~~~~~~-~-h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~------------- 264 (318)
|+|||+.++++. .++. + |...|++++|+|+ +.+|++++.|++|+||++..........+
T Consensus 220 v~iwd~~~~~~~--~~~~~g~h~~~v~~~~~s~~----~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (355)
T 3vu4_A 220 IRVFKTEDGVLV--REFRRGLDRADVVDMKWSTD----GSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEW 293 (355)
T ss_dssp EEEEETTTCCEE--EEEECTTCCSCEEEEEECTT----SCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSS
T ss_pred EEEEECCCCcEE--EEEEcCCCCCcEEEEEECCC----CCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccc
Confidence 999999987653 4455 5 9999999999996 88999999999999999876431111110
Q ss_pred -------e-ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 265 -------N-TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 265 -------~-~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
. ........++|+|||+.|++++.||.+++|++..++
T Consensus 294 ~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 294 SLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred ceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 0 011223678999999999999999999999986643
No 105
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=240.01 Aligned_cols=243 Identities=11% Similarity=0.094 Sum_probs=180.1
Q ss_pred eeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEE
Q psy2762 16 IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW 95 (318)
Q Consensus 16 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vW 95 (318)
.....+.+++.+|++|+.||+|+|||+.. ++.+..+. ...|.++.|. |. +++++.|++|++|
T Consensus 39 ~~~~~~~~d~~~l~sg~~Dg~v~iwd~~~-----------~~~~~~~~--~~~v~~~~~~-~~----~~s~s~D~~i~~w 100 (343)
T 3lrv_A 39 ELNKSMYYDKWVCMCRCEDGALHFTQLKD-----------SKTITTIT--TPNPRTGGEH-PA----IISRGPCNRLLLL 100 (343)
T ss_dssp EECSSSSEEEEEEEEEEETTEEEEEEESS-----------SSCEEEEE--EECCCTTCCC-CS----EEEECSTTEEEEE
T ss_pred hhhhhhcCCCCEEEEECCCCcEEEEECCC-----------CcEEEEEe--cCCceeeeeC-Cc----eEEecCCCeEEEE
Confidence 33345567889999999999999999973 34455554 5678888874 42 9999999999999
Q ss_pred eCC---------CCcEEEEEEecCCCcCeEEEEeeC--CCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccc
Q psy2762 96 RGD---------NGNWFKYYEYNNHDSSVNSIAWAP--KEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCN 163 (318)
Q Consensus 96 d~~---------~~~~~~~~~~~~h~~~v~~v~~~p--~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~ 163 (318)
+.. ++....... .+|...|.+++|+| + +.++++++.|++|++||+..+. ..... ..|...+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~--~~~l~s~s~dg~i~~wd~~~~~---~~~~~~~~~~~~i~ 174 (343)
T 3lrv_A 101 YPGNQITILDSKTNKVLREIE-VDSANEIIYMYGHNEVN--TEYFIWADNRGTIGFQSYEDDS---QYIVHSAKSDVEYS 174 (343)
T ss_dssp ETTTEEEEEETTTCCEEEEEE-CCCSSCEEEEECCC-----CCEEEEEETTCCEEEEESSSSC---EEEEECCCSSCCCC
T ss_pred EccCceEEeecCCcceeEEee-cCCCCCEEEEEcCCCCC--CCEEEEEeCCCcEEEEECCCCc---EEEEEecCCCCceE
Confidence 765 332222222 25778899999999 6 7799999999999999985443 12222 24556799
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-CCCCeeEEEEccCCCCCccEEEEE
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASC 242 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~ 242 (318)
+++|+|+ +.+||+|+.|+.|+|||+++++.. ...+.+ |..+|++|+|+|+ +.+|+++
T Consensus 175 ~~~~~pd-----------------g~~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~----g~~l~s~ 232 (343)
T 3lrv_A 175 SGVLHKD-----------------SLLLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADN----GYWMVVE 232 (343)
T ss_dssp EEEECTT-----------------SCEEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTT----SSEEEEE
T ss_pred EEEECCC-----------------CCEEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCC----CCEEEEE
Confidence 9999997 578999999999999999887532 145677 9999999999996 8899999
Q ss_pred eCCCeEEEEEcCCCccee-eEEeeecCCcE--EEEEEcCCCCEEEEEeC-CCeEEEEEECCCC-ceEE
Q psy2762 243 SQDRKVIIWTSNDYVTWT-PFIMNTFDDVV--WNVSWSLTGDILTVSCG-DNSVSLWKENTDG-AWQC 305 (318)
Q Consensus 243 s~D~~i~vw~~~~~~~~~-~~~~~~~~~~v--~~v~~spdg~~l~s~~~-D~~v~iW~~~~~~-~~~~ 305 (318)
+.| +|++||+....... ...+..+...+ .+++|+|+|++|++++. |+.++||+.+... .|..
T Consensus 233 ~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 233 CDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp ESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred eCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence 955 99999998754211 11111122233 35999999999999998 9999999986644 4765
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-32 Score=250.77 Aligned_cols=249 Identities=12% Similarity=0.091 Sum_probs=187.6
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCC-CCC-----------------CCCcceEEEEec-ccccCeE
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKK-DDS-----------------HSQKGTLIAELK-GHSGPVW 70 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~-~~~-----------------~~~~~~~~~~~~-~h~~~V~ 70 (318)
..-...|.+++|+|||+++||+|.|++|+ |....... .+. .-..+.....+. .|...|+
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~ 89 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR 89 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE
Confidence 34568999999999999999999999998 54321100 000 000011011222 5688899
Q ss_pred EEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc-----CeEEEEeeCCCCCcEEEEeecCCeEEEEEeec
Q psy2762 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS-----SVNSIAWAPKEFGLILACGSSDGTISFLTYMS 145 (318)
Q Consensus 71 ~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~ 145 (318)
+++|+| +|.+||+++.||+|+|||.++ ....+. |.. .|.+++|+|+ +.+||+|+.||+|++|+...
T Consensus 90 ~vawSP--dG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPD--G~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 90 VCKPSP--IDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPI--ESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp EEEECS--SSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSS--SSCEEEEETTSEEEEEECCC
T ss_pred EEEECC--CCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCC--CCEEEEEcCCCEEEEEECCC
Confidence 999985 599999999999999999543 333455 555 4999999999 78999999999999999854
Q ss_pred CCCC-c---ceeee----cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE-EEEEc
Q psy2762 146 DTNS-W---ESRKI----AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI-EETKL 216 (318)
Q Consensus 146 ~~~~-~---~~~~~----~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~-~~~~~ 216 (318)
+.-. . ....+ .+|...|.+++|+|+ + +|+++.|++||+||+.++... ...++
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd-----------------g--Laass~D~tVrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYED-----------------V--LVAALSNNSVFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT-----------------E--EEEEETTCCEEEECCCSSSSCCCEEEE
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCC-----------------c--EEEEeCCCeEEEEECCCCccccceeee
Confidence 3210 0 12333 568889999999996 4 889999999999999876532 12345
Q ss_pred -ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEE--cCCCCEEEEEeCCCeEE
Q psy2762 217 -ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW--SLTGDILTVSCGDNSVS 293 (318)
Q Consensus 217 -~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~--spdg~~l~s~~~D~~v~ 293 (318)
.+|...|.+|+|+ + ..||+++ |++|++|+..+... .....+|.+.|++++| +||++.|+++++||+ |
T Consensus 222 ~~~h~~~V~svaFs-g-----~~LASa~-~~tIkLWd~~~~~~--~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-k 291 (588)
T 2j04_A 222 QNASRRKITDLKIV-D-----YKVVLTC-PGYVHKIDLKNYSI--SSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-K 291 (588)
T ss_dssp ECCCSSCCCCEEEE-T-----TEEEEEC-SSEEEEEETTTTEE--EEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-E
T ss_pred cccccCcEEEEEEE-C-----CEEEEEe-CCeEEEEECCCCeE--EEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-E
Confidence 4788999999998 2 5788887 69999999887531 1223379999999999 999999999999999 9
Q ss_pred EEEEC
Q psy2762 294 LWKEN 298 (318)
Q Consensus 294 iW~~~ 298 (318)
+|..+
T Consensus 292 lw~~d 296 (588)
T 2j04_A 292 VLLED 296 (588)
T ss_dssp EEESS
T ss_pred EEeec
Confidence 99965
No 107
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.1e-29 Score=233.14 Aligned_cols=243 Identities=22% Similarity=0.394 Sum_probs=191.4
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEE--EecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA--ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV 92 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~--~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v 92 (318)
.++.++|+++ ++|+.| .|++|+|||... ++++. .+.+|.+.|++|+|++ +|++||+|+.||+|
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~t-----------g~~~~~~~~~~~~~~V~sv~fsp--dg~~lasgs~Dg~v 171 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASS-----------GDILQLLQMEQPGEYISSVAWIK--EGNYLAVGTSSAEV 171 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTT-----------CCEEEEEECCSTTCCEEEEEECT--TSSEEEEEETTSCE
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCC-----------CCEEEEEEecCCCCcEEEEEECC--CCCEEEEEECCCeE
Confidence 3556889875 577765 499999999873 44444 4557889999999974 59999999999999
Q ss_pred EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCC
Q psy2762 93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG 172 (318)
Q Consensus 93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 172 (318)
+|||+.+++. ...+.+|...+.++++++ .++++|+.|+.+++|+..... .....+.+|...+..+.|+|+
T Consensus 172 ~iWd~~~~~~--~~~~~~h~~~v~~~s~~~----~~l~sgs~d~~i~~~d~~~~~--~~~~~~~~h~~~~~~~~~~~~-- 241 (420)
T 4gga_A 172 QLWDVQQQKR--LRNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAE--HHVATLSGHSQEVCGLRWAPD-- 241 (420)
T ss_dssp EEEETTTTEE--EEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTT--
T ss_pred EEEEcCCCcE--EEEEeCCCCceEEEeeCC----CEEEEEeCCCceeEeeecccc--eeeEEecccccceeeeeecCC--
Confidence 9999998764 446778999999999875 479999999999999874432 234556789999999999996
Q ss_pred CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE--EEEEEcccCCCCeeEEEEccCCCCCccEEEE--EeCCCeE
Q psy2762 173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW--IEETKLENHSDWVRDVAWAPSWGLSKCMIAS--CSQDRKV 248 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s--~s~D~~i 248 (318)
+.++++++.|+.|+||+...++. ........|...|.+++|+|. .+.++++ |+.|++|
T Consensus 242 ---------------g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~---~~~~la~~~gs~D~~I 303 (420)
T 4gga_A 242 ---------------GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW---QSNVLATGGGTSDRHI 303 (420)
T ss_dssp ---------------SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTT---CTTEEEEEECTTTCEE
T ss_pred ---------------CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCC---cccEEEEEeecCCCEE
Confidence 57899999999999999876531 123456789999999999997 4566665 4589999
Q ss_pred EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEECCCCce
Q psy2762 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC--GDNSVSLWKENTDGAW 303 (318)
Q Consensus 249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~--~D~~v~iW~~~~~~~~ 303 (318)
+|||+.+... .. .......|.++.|+|+++.|++++ .|++|+|||...+...
T Consensus 304 ~iwd~~t~~~--~~-~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v 357 (420)
T 4gga_A 304 RIWNVCSGAC--LS-AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV 357 (420)
T ss_dssp EEEETTTTEE--EE-EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred EEEeCCcccc--ce-eeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEE
Confidence 9999987542 22 223456789999999999998876 6999999998765433
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=1.2e-30 Score=229.45 Aligned_cols=214 Identities=14% Similarity=0.098 Sum_probs=153.1
Q ss_pred CcceeeeeeecCC----CCEEEEeeC--------------------CCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc
Q psy2762 12 HEDMIHDAEMDYL----GLYLATCSS--------------------DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67 (318)
Q Consensus 12 H~~~v~~~~~~~~----g~~l~s~s~--------------------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~ 67 (318)
|...|+.++|+|+ ++++++++. |++|++|++.. .+..+.++.+|..
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~----------dG~~~~s~~~~~~ 179 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE----------DGGGKENQFLMPP 179 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT----------TSCEEEEEEECCC
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC----------CCceeeeeccCCC
Confidence 4568888889999 888887663 88888888741 3567788889999
Q ss_pred CeEEEEecC-CCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCC---cCeEEEEeeCCCCCcEEEEeecCCeEEEEEe
Q psy2762 68 PVWQVAWAH-PQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHD---SSVNSIAWAPKEFGLILACGSSDGTISFLTY 143 (318)
Q Consensus 68 ~V~~v~~~~-~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~---~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~ 143 (318)
.|..++|++ +.++.+|||+|.|++|||||+.+++...+ +.+|. ..+.+++|+|+ +.++++++.+.. +
T Consensus 180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~t--L~g~~~~v~~v~~vafSpd--G~~lvs~s~~~~--~--- 250 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKK--MHIDDSYQASVCHKAYSEM--GLLFIVLSHPCA--K--- 250 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEE--EECCC---CCCEEEEEEET--TEEEEEEC----------
T ss_pred ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEE--EcCCCcceeeeEEEEECCC--CCEEEEeccCCC--c---
Confidence 999999975 44679999999999999999999885554 44433 46788899998 677776654321 1
Q ss_pred ecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE---cccCC
Q psy2762 144 MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK---LENHS 220 (318)
Q Consensus 144 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~---~~~h~ 220 (318)
..+++|+.|++|++||..+++...... ..+|.
T Consensus 251 ---------------------------------------------w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~ 285 (356)
T 2w18_A 251 ---------------------------------------------ESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQA 285 (356)
T ss_dssp ----------------------------------------------------CCEEEEEEETTTTEEEEEEEECCCTTCC
T ss_pred ---------------------------------------------ceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCc
Confidence 137899999999999999886543222 14776
Q ss_pred CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEE-EEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVW-NVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~-~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
..+.+..++ +..+|+++.|++|+|||+..... ...+.+|...+. .++|||||++|+||+.|++|||||.
T Consensus 286 ~~~lsg~~s------g~~lASgS~DgTIkIWDl~tGk~--l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 286 GRFLEGDVK------DHCAAAILTSGTIAIWDLLLGQC--TALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCEEEEEEE------TTEEEEEETTSCEEEEETTTCSE--EEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ceeEccccC------CCEEEEEcCCCcEEEEECCCCcE--EEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 655444443 56899999999999999988652 345666766555 5899999999999999999999985
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=5e-31 Score=234.09 Aligned_cols=239 Identities=9% Similarity=0.094 Sum_probs=192.8
Q ss_pred CCCcceeeeeeecCCCC-EEEEeeCCCcEEEEEc-CCCcCCCCCCCCcceEEEEecc--cccCeEEEEecCCCCCcEEEE
Q psy2762 10 TGHEDMIHDAEMDYLGL-YLATCSSDHTVKVFNL-DRNLKKDDSHSQKGTLIAELKG--HSGPVWQVAWAHPQFGTLLAS 85 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~-~~~~~~~~~~~~~~~~~~~~~~--h~~~V~~v~~~~~~~~~~las 85 (318)
.+|...|++++|+|+++ +|++|+.||.|++||+ ... . ...+.+ |...|.+++|++ +.+|++
T Consensus 53 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-----------~-~~~~~~~~~~~~v~~l~~~~---~~~l~s 117 (342)
T 1yfq_A 53 LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP-----------S-FQALTNNEANLGICRICKYG---DDKLIA 117 (342)
T ss_dssp EECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS-----------S-EEECBSCCCCSCEEEEEEET---TTEEEE
T ss_pred eecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC-----------c-eEeccccCCCCceEEEEeCC---CCEEEE
Confidence 48999999999999999 9999999999999998 632 2 367888 999999999973 789999
Q ss_pred EECCCeEEEEeCCC---------CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec-CCCCcceeee
Q psy2762 86 CSYDRKVIIWRGDN---------GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS-DTNSWESRKI 155 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~---------~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~-~~~~~~~~~~ 155 (318)
++.|+.|++||+.+ .+ ....+. |...|.+++|+|+ . +++++.|+.|++|++.. .... .....
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~-~~~~v~~~~~~~~--~--l~~~~~d~~i~i~d~~~~~~~~-~~~~~ 189 (342)
T 1yfq_A 118 ASWDGLIEVIDPRNYGDGVIAVKNL--NSNNTK-VKNKIFTMDTNSS--R--LIVGMNNSQVQWFRLPLCEDDN-GTIEE 189 (342)
T ss_dssp EETTSEEEEECHHHHTTBCEEEEES--CSSSSS-SCCCEEEEEECSS--E--EEEEESTTEEEEEESSCCTTCC-CEEEE
T ss_pred EcCCCeEEEEcccccccccccccCC--eeeEEe-eCCceEEEEecCC--c--EEEEeCCCeEEEEECCcccccc-ceeee
Confidence 99999999999875 33 222333 7889999999987 3 88999999999999865 3221 12233
Q ss_pred cccccccceeeeCC-CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC--e--EEEEEEcccCCC---------
Q psy2762 156 AAHTIGCNAVSWGP-GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD--K--WIEETKLENHSD--------- 221 (318)
Q Consensus 156 ~~h~~~v~~~~~~p-~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~--~--~~~~~~~~~h~~--------- 221 (318)
..|...+.+++|+| + +.+|++++.|+.|+||+++.. + ......+..|..
T Consensus 190 ~~~~~~i~~i~~~~~~-----------------~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (342)
T 1yfq_A 190 SGLKYQIRDVALLPKE-----------------QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252 (342)
T ss_dssp CSCSSCEEEEEECSGG-----------------GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCC
T ss_pred cCCCCceeEEEECCCC-----------------CCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccce
Confidence 46778899999999 6 468999999999999998765 0 012344566654
Q ss_pred CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec-CCcEEEEEEcCCCCEEEEEeCCCe-EEEEE
Q psy2762 222 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGDILTVSCGDNS-VSLWK 296 (318)
Q Consensus 222 ~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~-~~~v~~v~~spdg~~l~s~~~D~~-v~iW~ 296 (318)
.|++++|+|+ +.+|++++.|+.|++||+.... ....+..| ..+|.+++ |+|++|++++.||+ .+.|.
T Consensus 253 ~i~~~~~s~~----~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 253 PVNSIEFSPR----HKFLYTAGSDGIISCWNLQTRK--KIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CEEEEEECTT----TCCEEEEETTSCEEEEETTTTE--EEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred eEEEEEEcCC----CCEEEEecCCceEEEEcCccHh--HhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 9999999996 7889999999999999998654 24456677 89999999 99999999999998 55554
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7e-30 Score=236.54 Aligned_cols=258 Identities=15% Similarity=0.040 Sum_probs=195.5
Q ss_pred CCCcceeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec--ccccCeEEEEecCCCCCcEEEEE
Q psy2762 10 TGHEDMIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK--GHSGPVWQVAWAHPQFGTLLASC 86 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~v~~~~~~~~~~las~ 86 (318)
.+|.+.|++++|+|+|++| ++|+.|++|+|||+... .+..+..+. .|...|++++|++ ++.+|++|
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~---------~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~ 167 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKT---------SKNVLKLRKRFCFSKRPNAISIAE--DDTTVIIA 167 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSS---------SSSCEEEEEEEECSSCEEEEEECT--TSSEEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCC---------CCceeeeeecccCCCCceEEEEcC--CCCEEEEE
Confidence 3678899999999999996 89999999999998611 133455555 5679999999974 58999999
Q ss_pred ECCCeEEEEeCCCCcEE--EEEEecCCCcCeEEEEeeCC-CCCcEEEEeecCCeEEEEEeecCCCCcceee-eccccccc
Q psy2762 87 SYDRKVIIWRGDNGNWF--KYYEYNNHDSSVNSIAWAPK-EFGLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGC 162 (318)
Q Consensus 87 s~Dg~v~vWd~~~~~~~--~~~~~~~h~~~v~~v~~~p~-~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~-~~~h~~~v 162 (318)
+.|+.|.+|++.+.... ....+.+|...|.+++|+|+ +.+.++++++.|+.|++||+.... .... +.+|...|
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~h~~~v 244 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF---IVDKWLFGHKHFV 244 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT---CEEEECCCCSSCE
T ss_pred eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc---eeeeeecCCCCce
Confidence 99999999998765422 12245679999999999997 235689999999999999985443 2333 45899999
Q ss_pred ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc-----------------------cC
Q psy2762 163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE-----------------------NH 219 (318)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~-----------------------~h 219 (318)
.+++|+ + +.+|++++.|++|+|||+.++++....... .+
T Consensus 245 ~~~~~s-d-----------------~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 245 SSICCG-K-----------------DYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp EEEEEC-S-----------------TTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred EEEEEC-C-----------------CCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 999999 5 478999999999999999888654433321 23
Q ss_pred CCCeeEEEEccCCCCCccEEEEEe-CCCeEEEEEc--CCCcc-eeeEEeeecCCcEEEEEEcCCCCEEEEEeC------C
Q psy2762 220 SDWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTS--NDYVT-WTPFIMNTFDDVVWNVSWSLTGDILTVSCG------D 289 (318)
Q Consensus 220 ~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~vw~~--~~~~~-~~~~~~~~~~~~v~~v~~spdg~~l~s~~~------D 289 (318)
...|.++.|+|+ +.+|++++ .|+.|+||++ ..... .....+..+ ..|.+++|+|++.+++.++. +
T Consensus 307 ~~~v~~i~~~~~----~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~ 381 (450)
T 2vdu_B 307 EFAVSKIIKSKN----LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQK 381 (450)
T ss_dssp CCCEEEEEECSS----SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCC
T ss_pred eEEEEEEEEeCC----CCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCC
Confidence 456899999996 78888888 8999999999 33211 122233444 78999999996544444443 5
Q ss_pred CeEEEEEECC-CCceE
Q psy2762 290 NSVSLWKENT-DGAWQ 304 (318)
Q Consensus 290 ~~v~iW~~~~-~~~~~ 304 (318)
+.|++|.++. +++|.
T Consensus 382 ~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 382 NFAKFIEYNLNENSFV 397 (450)
T ss_dssp CSEEEEEEETTTTEEE
T ss_pred cceEEEEEEcCCCeEE
Confidence 5689999876 45664
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.98 E-value=4.5e-29 Score=219.03 Aligned_cols=245 Identities=22% Similarity=0.379 Sum_probs=189.5
Q ss_pred eeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe--cccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762 16 IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL--KGHSGPVWQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 16 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
+++|+||+++ +||+| .|++|+|||++ +++++..+ .+|...|++++|++ ++++||||+.||+|+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~-----------tg~~~~~~~~~~~~~~V~~v~~~~--~~~~l~sgs~Dg~v~ 92 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSAS-----------SGDILQLLQMEQPGEYISSVAWIK--EGNYLAVGTSSAEVQ 92 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETT-----------TCCEEEEEECCSTTCCEEEEEECT--TSSEEEEEETTSEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECC-----------CCCEEEEEEecCCCCeEEEEEECC--CCCEEEEEECCCcEE
Confidence 5679999886 66665 59999999987 34555544 57889999999974 589999999999999
Q ss_pred EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS 173 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 173 (318)
+||+.+++. ...+.+|...+.++++.+ .++++++.++.+++|+..... .....+.+|...+..+.++++
T Consensus 93 iw~~~~~~~--~~~~~~h~~~~~~~~~~~----~~l~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--- 161 (318)
T 4ggc_A 93 LWDVQQQKR--LRNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAE--HHVATLSGHSQEVCGLRWAPD--- 161 (318)
T ss_dssp EEETTTTEE--EEEEECCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTT---
T ss_pred EeecCCcee--EEEecCccceEEEeecCC----CEEEEEecCCceEeeecCCCc--eeEEEEcCccCceEEEEEcCC---
Confidence 999998864 445678999998877664 479999999999999864332 234456689999999999886
Q ss_pred CccccccCCCCCCccceEEEecCCCeEEEEEccCCeE--EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762 174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW--IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw 251 (318)
+.+|++++.|++|+|||+.+++. ........|...|.++.++|... ..-.+++++.|++|++|
T Consensus 162 --------------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~i~lw 226 (318)
T 4ggc_A 162 --------------GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS-NVLATGGGTSDRHIRIW 226 (318)
T ss_dssp --------------SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST-TEEEEEECTTTCEEEEE
T ss_pred --------------CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC-cEEEEEecCCCCEEEEE
Confidence 46899999999999999876431 12334567888899999999721 12234677889999999
Q ss_pred EcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEECCCCceE
Q psy2762 252 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC--GDNSVSLWKENTDGAWQ 304 (318)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~--~D~~v~iW~~~~~~~~~ 304 (318)
+..... ......+...+..+.|+|+++.+++++ .|++|+|||+..+....
T Consensus 227 d~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~ 278 (318)
T 4ggc_A 227 NVCSGA---CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA 278 (318)
T ss_dssp ETTTCC---EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE
T ss_pred eccccc---ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE
Confidence 987654 233345667899999999999988765 79999999987764433
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.9e-30 Score=238.86 Aligned_cols=233 Identities=12% Similarity=0.124 Sum_probs=179.6
Q ss_pred cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc-----CeEEEEecCCCCCcEE
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG-----PVWQVAWAHPQFGTLL 83 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~-----~V~~v~~~~~~~~~~l 83 (318)
..+|.+.|.+++|||+|++||+++.||+|+|||.+ .++..+. |.. .|.+++|++ +|++|
T Consensus 81 ~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~-------------~~l~~l~-~~~~~~~~sv~svafSP--DG~~L 144 (588)
T 2j04_A 81 NSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN-------------KMLTNLD-SKGNLSSRTYHCFEWNP--IESSI 144 (588)
T ss_dssp TTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETT-------------EEEEECC-CSSCSTTTCEEEEEECS--SSSCE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC-------------ceeeecc-CCCccccccEEEEEEcC--CCCEE
Confidence 33778999999999999999999999999999964 2677777 776 499999974 59999
Q ss_pred EEEECCCeEEEEeCCCCcE-----EEEEEe----cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762 84 ASCSYDRKVIIWRGDNGNW-----FKYYEY----NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK 154 (318)
Q Consensus 84 as~s~Dg~v~vWd~~~~~~-----~~~~~~----~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~ 154 (318)
|+|+.||+|+|||+..+.. ....++ .+|...|.+|+|+|+ + +++++.|++|++|+...+........
T Consensus 145 Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd--g--Laass~D~tVrlWd~~~~~~~~~~~t 220 (588)
T 2j04_A 145 VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED--V--LVAALSNNSVFSMTVSASSHQPVSRM 220 (588)
T ss_dssp EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT--E--EEEEETTCCEEEECCCSSSSCCCEEE
T ss_pred EEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC--c--EEEEeCCCeEEEEECCCCccccceee
Confidence 9999999999999987642 123344 568889999999998 5 77889999999999744331101233
Q ss_pred ec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEE--ccC
Q psy2762 155 IA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAW--APS 231 (318)
Q Consensus 155 ~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~--sp~ 231 (318)
+. +|...|.+++|+ + +.||+++ +++|++||..+++.. ... .+|.+.|.++.| +|+
T Consensus 221 L~~~h~~~V~svaFs-g------------------~~LASa~-~~tIkLWd~~~~~~~-~~~-~gh~~~V~~va~~~s~d 278 (588)
T 2j04_A 221 IQNASRRKITDLKIV-D------------------YKVVLTC-PGYVHKIDLKNYSIS-SLK-TGSLENFHIIPLNHEKE 278 (588)
T ss_dssp EECCCSSCCCCEEEE-T------------------TEEEEEC-SSEEEEEETTTTEEE-EEE-CSCCSCCCEEEETTCSS
T ss_pred ecccccCcEEEEEEE-C------------------CEEEEEe-CCeEEEEECCCCeEE-EEE-cCCCceEEEEEeeeCCC
Confidence 53 788899999998 3 4788887 699999999887542 222 389999999999 986
Q ss_pred CCCCccEEEEEeCCCeEEEEEcCCCc----------------cee----eEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762 232 WGLSKCMIASCSQDRKVIIWTSNDYV----------------TWT----PFIMNTFDDVVWNVSWSLTGDILTVSCG 288 (318)
Q Consensus 232 ~~~~~~~l~s~s~D~~i~vw~~~~~~----------------~~~----~~~~~~~~~~v~~v~~spdg~~l~s~~~ 288 (318)
+..|+++++||+ ++|...... .|. +.........|++|+|||||+.||+++.
T Consensus 279 ----~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 279 ----STILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp ----CEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred ----CCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEe
Confidence 789999999999 999864211 000 0000011235999999999999999873
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=5.8e-29 Score=225.43 Aligned_cols=262 Identities=16% Similarity=0.158 Sum_probs=166.7
Q ss_pred CCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCC-CCcEEEEEE
Q psy2762 10 TGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ-FGTLLASCS 87 (318)
Q Consensus 10 ~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~~~~las~s 87 (318)
.+|...|++++|+| ++.+|++++.|++|++||+.. +..+..+. |...+.++.|.+.. ++.+|++++
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 163 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT-----------LQTADVFN-FEETVYSHHMSPVSTKHCLVAVGT 163 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT-----------TEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC-----------Cccceecc-CCCceeeeEeecCCCCCcEEEEEc
Confidence 47999999999999 788999999999999999973 34555554 78889999996421 355999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-------------eee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-------------SRK 154 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-------------~~~ 154 (318)
.|+.|++||+.++.. ...+..|...|.+++|+|+. ..++++++.|+.|++||+........ ...
T Consensus 164 ~~~~v~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~-~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (408)
T 4a11_B 164 RGPKVQLCDLKSGSC--SHILQGHRQEILAVSWSPRY-DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA 240 (408)
T ss_dssp SSSSEEEEESSSSCC--CEEECCCCSCEEEEEECSSC-TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred CCCeEEEEeCCCcce--eeeecCCCCcEEEEEECCCC-CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccc
Confidence 999999999987764 33566899999999999984 33689999999999999854431110 011
Q ss_pred ecccccccceeeeCCCCCCCc---------cccccCCC---------------------CCCccceEEEecCCCeEEEEE
Q psy2762 155 IAAHTIGCNAVSWGPGIGSLS---------ELDLKGSK---------------------LGGVAKRLVSGGCDNLIKIWK 204 (318)
Q Consensus 155 ~~~h~~~v~~~~~~p~~~~~~---------~~~~~~~~---------------------~~~~~~~lasgs~d~~i~iwd 204 (318)
...|...+..++|+|+...+. ..++.... .......++.++.|+.|++||
T Consensus 241 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d 320 (408)
T 4a11_B 241 NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYT 320 (408)
T ss_dssp SCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEE
T ss_pred cccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEE
Confidence 146888899999999742111 11111000 001123456666677777777
Q ss_pred ccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEE
Q psy2762 205 QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDIL 283 (318)
Q Consensus 205 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l 283 (318)
+.+++. ...+.+|...|++++|+|+ +.+|++++.|+.|++|++..... +...........+.| +...+
T Consensus 321 ~~~~~~--~~~~~~~~~~v~~~~~s~~----~~~l~s~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 389 (408)
T 4a11_B 321 VYSGEQ--ITMLKGHYKTVDCCVFQSN----FQELYSGSRDCNILAWVPSLYEP-----VPDDDETTTKSQLNPAFEDAW 389 (408)
T ss_dssp TTTCCE--EEEECCCSSCEEEEEEETT----TTEEEEEETTSCEEEEEECC-----------------------------
T ss_pred CcCCcc--eeeeccCCCeEEEEEEcCC----CCEEEEECCCCeEEEEeCCCCCc-----cCCCCceEeccccccccceee
Confidence 666543 4567899999999999996 78999999999999999987532 111111112233444 33445
Q ss_pred EEEeCCCeEEEEEE
Q psy2762 284 TVSCGDNSVSLWKE 297 (318)
Q Consensus 284 ~s~~~D~~v~iW~~ 297 (318)
.+.+.|+.+++|+.
T Consensus 390 ~~~~~~~~~~~W~~ 403 (408)
T 4a11_B 390 SSSDEEGGTSAWSH 403 (408)
T ss_dssp --------------
T ss_pred cccCccCceeecCC
Confidence 56778999999974
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=8e-29 Score=218.88 Aligned_cols=230 Identities=20% Similarity=0.318 Sum_probs=175.0
Q ss_pred ecCCCcceeeeeeecC--CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762 8 VDTGHEDMIHDAEMDY--LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS 85 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~--~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las 85 (318)
...+|...|++++|+| ++++|++|+.|++|+|||+..... .......+.+..+.+|.+.|.+++|++...+.+|++
T Consensus 52 ~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 129 (351)
T 3f3f_A 52 SWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQE--ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC 129 (351)
T ss_dssp EEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSC--TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred eeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcc--cccccCcceeeeecccCCceeEEEEcCCCCCcEEEE
Confidence 4468999999999999 699999999999999999973211 001112256788999999999999964212889999
Q ss_pred EECCCeEEEEeCCCCcEEEEEE-----------ecCCCcCeEEEEeeCCC-CCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762 86 CSYDRKVIIWRGDNGNWFKYYE-----------YNNHDSSVNSIAWAPKE-FGLILACGSSDGTISFLTYMSDTNSWESR 153 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~~~~~~~~~-----------~~~h~~~v~~v~~~p~~-~~~~lasgs~d~~i~i~~~~~~~~~~~~~ 153 (318)
++.|++|++||+.+++....+. ...|...+.+++|+|+. .+.++++++.|+.+.+|+..... .....
T Consensus 130 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~ 208 (351)
T 3f3f_A 130 LGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-LHVAA 208 (351)
T ss_dssp EETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-EEEEE
T ss_pred ecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-eeeee
Confidence 9999999999987654211110 12577889999999962 14689999999998776543221 11234
Q ss_pred eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-------------------------
Q psy2762 154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD------------------------- 208 (318)
Q Consensus 154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~------------------------- 208 (318)
.+.+|...|.+++|+|+.... ..+|++|+.|+.|++||+..+
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~-------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRW-------------YQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMD 275 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCS-------------SEEEEEEETTSCEEEEEEEECC------------------------
T ss_pred ecCCCCcceeEEEECCCCCCc-------------ceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccc
Confidence 556899999999999973100 168999999999999998753
Q ss_pred -------------------eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc
Q psy2762 209 -------------------KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV 257 (318)
Q Consensus 209 -------------------~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~ 257 (318)
.......+.+|...|++++|+|+ +.+|++++.|+.|+||++....
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~----~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 276 AQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT----GTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp ---------------CCSEEEEEEEEECTTSSCEEEEEECSS----SCCEEEEETTSCEEEEEECTTS
T ss_pred cccccccccceeeeecccccccEEEEEecccccEEEEEEcCC----CCEEEEecCCCcEEEEecCcCc
Confidence 12345667899999999999996 7899999999999999998754
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.6e-29 Score=244.84 Aligned_cols=224 Identities=21% Similarity=0.338 Sum_probs=178.8
Q ss_pred EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138 (318)
Q Consensus 59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i 138 (318)
+..+.+|.+.|++++|++ ++++|++|+.||+|+|||+.++.......+.+|...|.+++|+|+..+.++++|+.||.|
T Consensus 2 ~~~l~gH~~~V~~l~~s~--dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp ------CCCCEEEECCCS--SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eeecccCcceeEEEEECC--CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 346789999999999974 589999999999999999886555566678899999999999987556789999999999
Q ss_pred EEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc
Q psy2762 139 SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN 218 (318)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~ 218 (318)
++|++..+.. .....+.+|..+|.+++|+|+. .+.+|++|+.||.|++||+..+.......+.+
T Consensus 80 ~vwd~~~~~~-~~~~~~~~h~~~V~~v~~sp~~---------------~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 80 LIWKEENGRW-SQIAVHAVHSASVNSVQWAPHE---------------YGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp EEEEEETTEE-EEEEEECCCSSCEEEEEECCGG---------------GCSEEEEEETTSEEEEEECCSSSCCCCEEEEC
T ss_pred EEEECCCCcc-cccccccCCCCCeEEEEECCCC---------------CCCEEEEEeCCCcEEEEEeecCCCcceeEeec
Confidence 9999865421 1234456799999999999962 03589999999999999988764334456678
Q ss_pred CCCCeeEEEEccCC---------CCCccEEEEEeCCCeEEEEEcCCCcc--eeeEEeeecCCcEEEEEEcCC---CCEEE
Q psy2762 219 HSDWVRDVAWAPSW---------GLSKCMIASCSQDRKVIIWTSNDYVT--WTPFIMNTFDDVVWNVSWSLT---GDILT 284 (318)
Q Consensus 219 h~~~V~~v~~sp~~---------~~~~~~l~s~s~D~~i~vw~~~~~~~--~~~~~~~~~~~~v~~v~~spd---g~~l~ 284 (318)
|...|.++.|+|.. ..++.+|++++.|++|++||+..... .....+..|...|.+++|+|+ |++|+
T Consensus 144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~ 223 (753)
T 3jro_A 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLA 223 (753)
T ss_dssp CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEE
Confidence 99999999999931 00267899999999999999876532 122345678899999999999 99999
Q ss_pred EEeCCCeEEEEEECCC
Q psy2762 285 VSCGDNSVSLWKENTD 300 (318)
Q Consensus 285 s~~~D~~v~iW~~~~~ 300 (318)
+++.||+|++|+...+
T Consensus 224 s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 224 SVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEESSSCEEEEEESSS
T ss_pred EEecCCEEEEecCCCC
Confidence 9999999999998875
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.6e-28 Score=223.75 Aligned_cols=268 Identities=12% Similarity=0.052 Sum_probs=169.6
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC--------------
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH-------------- 76 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~-------------- 76 (318)
.+...+.-+..+|++..|++++.|+.|++|+....... .........+.. ..|...+..+.|.+
T Consensus 16 ~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTP-GSTGLTLQELFT-IQTGLPTLHLSFSSSCSYSENLHDGDGN 93 (393)
T ss_dssp CCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSS-SCCSEEEEEEEE-EECSSCEEEEEECTTCEEECC-------
T ss_pred CCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcc-cccccceeeeEE-EecCCCeeeEeecCCccccccccCCCcc
Confidence 34444444444566655666677999999987421100 000000011111 12333444444431
Q ss_pred ----CCCCcEEEEEECCCeEEEEeCCCCcEEE---EEEecCCCcCeEEEEeeCCC------CCcEEEEeecCCeEEEEEe
Q psy2762 77 ----PQFGTLLASCSYDRKVIIWRGDNGNWFK---YYEYNNHDSSVNSIAWAPKE------FGLILACGSSDGTISFLTY 143 (318)
Q Consensus 77 ----~~~~~~las~s~Dg~v~vWd~~~~~~~~---~~~~~~h~~~v~~v~~~p~~------~~~~lasgs~d~~i~i~~~ 143 (318)
+.++.+||+++.|++|+|||...+.... ...+.+|...|++|+|+|.. .+.+||+++.|++|+|||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 2246789999999999999998775432 22357899999999999810 1679999999999999998
Q ss_pred ecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE----------
Q psy2762 144 MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE---------- 213 (318)
Q Consensus 144 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~---------- 213 (318)
.... ....+..|..++.+++|+|+. ..+|++|+.|++|++||+.+++....
T Consensus 174 ~~~~---~~~~~~~~~~~v~~v~~~p~~----------------~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 174 TDEG---PILAGYPLSSPGISVQFRPSN----------------PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp ETTE---EEEEEEECSSCEEEEEEETTE----------------EEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCc---eeeeecCCCCCcEEEEECCCC----------------CceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 6543 344566888999999999963 35799999999999999876532111
Q ss_pred -------------EEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEE------
Q psy2762 214 -------------TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNV------ 274 (318)
Q Consensus 214 -------------~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v------ 274 (318)
....+|...|.++.|++. ++..|++++.|+++++||+..... ...+..+...+..+
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~---dg~~l~s~s~d~~i~vwd~~~~~~--~~~l~~~~~~~~~~~~~~~~ 309 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGS---DGSGILAMCKSGAWLRWNLFANND--YNEISDSTMKLGPKNLLPNV 309 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETT---TTCEEEEECTTSEEEEEEC---------------------CCSCSE
T ss_pred eEEecccccceeeeecccccccceeeeeecC---CCCEEEEEeCCCCEEEEECccCCC--CceEeeecCccccEEEcccc
Confidence 122578888999999842 588999999999999999865431 11122222222222
Q ss_pred ------------EEcC--CCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762 275 ------------SWSL--TGDILTVSCGDNSVSLWKENTDGAWQ 304 (318)
Q Consensus 275 ------------~~sp--dg~~l~s~~~D~~v~iW~~~~~~~~~ 304 (318)
.|+| ++.++++++.||+|+|||...+....
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~ 353 (393)
T 4gq1_A 310 QGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS 353 (393)
T ss_dssp EEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE
T ss_pred ccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 3333 44567788899999999987765443
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.1e-28 Score=218.49 Aligned_cols=221 Identities=17% Similarity=0.227 Sum_probs=166.0
Q ss_pred ceEEEEecccccCeEEEEecCCCC--CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee
Q psy2762 56 GTLIAELKGHSGPVWQVAWAHPQF--GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS 133 (318)
Q Consensus 56 ~~~~~~~~~h~~~V~~v~~~~~~~--~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs 133 (318)
.+.+..+.+|.+.|++++|++ .. |++|++|+.||.|+|||+.+........+.+|...|.+++|+|+ +.++++++
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~-~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~ 105 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSP-PTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD--GSKVFTAS 105 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECC-TTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT--SSEEEEEE
T ss_pred cceeEeccCCCCceEEEEEcC-CCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC--CCEEEEEc
Confidence 345778899999999999974 33 69999999999999999987332333456789999999999998 67899999
Q ss_pred cCCeEEEEEeecCCCCcceeeecccccccceeee--CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762 134 SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW--GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI 211 (318)
Q Consensus 134 ~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~--~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~ 211 (318)
.|+.|++|++... ....+..|..++.++.| +|+ +.+|++++.|+.|++||+.+++..
T Consensus 106 ~dg~v~iwd~~~~----~~~~~~~~~~~v~~~~~~~~~~-----------------~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 106 CDKTAKMWDLSSN----QAIQIAQHDAPVKTIHWIKAPN-----------------YSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp TTSEEEEEETTTT----EEEEEEECSSCEEEEEEEECSS-----------------CEEEEEEETTSEEEEECSSCSSCS
T ss_pred CCCcEEEEEcCCC----CceeeccccCceEEEEEEeCCC-----------------CCEEEEccCCCcEEEEECCCCcEE
Confidence 9999999997433 23445689999999999 665 467889999999999987765432
Q ss_pred EEEEc---------------------------------------ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762 212 EETKL---------------------------------------ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 252 (318)
Q Consensus 212 ~~~~~---------------------------------------~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~ 252 (318)
..... ..+...+.++++.+........+++++.|+.|++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~ 244 (368)
T 3mmy_A 165 MVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHY 244 (368)
T ss_dssp EEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEE
T ss_pred EEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEe
Confidence 21111 112233555555554322334599999999999999
Q ss_pred cCCCcc-eeeEEeeecCC------------cEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 253 SNDYVT-WTPFIMNTFDD------------VVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 253 ~~~~~~-~~~~~~~~~~~------------~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
...... .....+..|.. .|.+++|+|+|++|++++.||.|+|||+..+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 245 INPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp SSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred cCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC
Confidence 987532 11223334433 7999999999999999999999999998765
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-28 Score=219.78 Aligned_cols=246 Identities=11% Similarity=0.058 Sum_probs=179.3
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCSYDRK 91 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s~Dg~ 91 (318)
...|.++.|+|+ +++++.|++|++|+........+ ...+..+..+. +|.+.|.+++|++..++++|++++.|++
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~ 150 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILD--SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGT 150 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEE--TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCC
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEee--cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCc
Confidence 357888889888 99999999999998752110000 11233344444 7789999999964225899999999999
Q ss_pred EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-cccccceeeeCCC
Q psy2762 92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVSWGPG 170 (318)
Q Consensus 92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~ 170 (318)
|++||+.+++..... ...|...|.+++|+|+ +.++++|+.|+.|++||+..... ....+.. |..+|.+++|+|+
T Consensus 151 i~~wd~~~~~~~~~~-~~~~~~~i~~~~~~pd--g~~lasg~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVH-SAKSDVEYSSGVLHKD--SLLLALYSPDGILDVYNLSSPDQ--ASSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp EEEEESSSSCEEEEE-CCCSSCCCCEEEECTT--SCEEEEECTTSCEEEEESSCTTS--CCEECCCCTTSCEEEEEECTT
T ss_pred EEEEECCCCcEEEEE-ecCCCCceEEEEECCC--CCEEEEEcCCCEEEEEECCCCCC--CccEEeccCCCCEEEEEEeCC
Confidence 999999988753332 1345668999999998 78999999999999999865542 1134555 9999999999997
Q ss_pred CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE-EEEcccCCCCee--EEEEccCCCCCccEEEEEeC-CC
Q psy2762 171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE-ETKLENHSDWVR--DVAWAPSWGLSKCMIASCSQ-DR 246 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~-~~~~~~h~~~V~--~v~~sp~~~~~~~~l~s~s~-D~ 246 (318)
+.+|++++. ++|+|||+++.+... ...+..|...+. +++|+|+ +.+|++++. |+
T Consensus 226 -----------------g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~l~~~s~~d~ 283 (343)
T 3lrv_A 226 -----------------GYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS----GKNMIAYSNESN 283 (343)
T ss_dssp -----------------SSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT----SSEEEEEETTTT
T ss_pred -----------------CCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCC----CCEEEEecCCCC
Confidence 478999995 499999988764321 112223444454 6999996 889999998 99
Q ss_pred eEEEEEcCCCcc-eeeEEeeecCCcEEEEEEcC---CCCEEEEEeCCCeEEEEEE
Q psy2762 247 KVIIWTSNDYVT-WTPFIMNTFDDVVWNVSWSL---TGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 247 ~i~vw~~~~~~~-~~~~~~~~~~~~v~~v~~sp---dg~~l~s~~~D~~v~iW~~ 297 (318)
.|+||+...... |.. .++..+.|+| +++.|++++.|+.++++-.
T Consensus 284 ~i~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 284 SLTIYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEcccccceEe-------cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 999999865431 211 4677899999 8999999999999999853
No 119
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-27 Score=213.35 Aligned_cols=217 Identities=18% Similarity=0.190 Sum_probs=176.0
Q ss_pred eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG 136 (318)
Q Consensus 57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~ 136 (318)
.....+.+|.+.|++++|++ ++++|++++.||.|++||+.+++. ...+.+|...|.+++|+|+ +.++++++.|+
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg 96 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNK--EGDLLFSCSKDSSASVWYSLNGER--LGTLDGHTGTIWSIDVDCF--TKYCVTGSADY 96 (369)
T ss_dssp EEEEEEECCSSCEEEEEECT--TSCEEEEEESSSCEEEEETTTCCE--EEEECCCSSCEEEEEECTT--SSEEEEEETTT
T ss_pred cccEEEEEeeceEEEEEEcC--CCCEEEEEeCCCEEEEEeCCCchh--hhhhhhcCCcEEEEEEcCC--CCEEEEEeCCC
Confidence 34567899999999999974 589999999999999999988764 4456789999999999998 67899999999
Q ss_pred eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeE-
Q psy2762 137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKW- 210 (318)
Q Consensus 137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~- 210 (318)
.|++|++.... ......|..++..+.|+|+ +.+|++++.+ +.|++||+.....
T Consensus 97 ~i~iwd~~~~~----~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 97 SIKLWDVSNGQ----CVATWKSPVPVKRVEFSPC-----------------GNYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp EEEEEETTTCC----EEEEEECSSCEEEEEECTT-----------------SSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred eEEEEECCCCc----EEEEeecCCCeEEEEEccC-----------------CCEEEEecCCccCCCCEEEEEEecCCccc
Confidence 99999975433 2222237788999999997 4689999998 9999999765421
Q ss_pred --------EEEEEcccCCC--CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC
Q psy2762 211 --------IEETKLENHSD--WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG 280 (318)
Q Consensus 211 --------~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg 280 (318)
.....+..|.. .+.+++|+|+ +.+|++++.|+.|++||+.... .....+..|...|.+++|+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 156 HELTKVSEEPIHKIITHEGLDAATVAGWSTK----GKYIIAGHKDGKISKYDVSNNY-EYVDSIDLHEKSISDMQFSPDL 230 (369)
T ss_dssp CCEEEECSSCSEEEECCTTCCCEEEEEECGG----GCEEEEEETTSEEEEEETTTTT-EEEEEEECCSSCEEEEEECTTS
T ss_pred eeecccccceeeeccCCcCccceeEEEEcCC----CCEEEEEcCCCEEEEEECCCCc-EeEEEEecCCCceeEEEECCCC
Confidence 01223445655 8999999996 8899999999999999998632 2334556788999999999999
Q ss_pred CEEEEEeCCCeEEEEEECCCCceEE
Q psy2762 281 DILTVSCGDNSVSLWKENTDGAWQC 305 (318)
Q Consensus 281 ~~l~s~~~D~~v~iW~~~~~~~~~~ 305 (318)
++|++++.|+.|++||+..+.....
T Consensus 231 ~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 231 TYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CEEEEecCCceEEEEECCCCceeee
Confidence 9999999999999999877644433
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.1e-28 Score=227.23 Aligned_cols=264 Identities=18% Similarity=0.253 Sum_probs=193.9
Q ss_pred eeeeeeecCCC----------CEEEEeeC----CCcEEEEEcCCCcC--C-----CCCC--------CCcceE-EEEecc
Q psy2762 15 MIHDAEMDYLG----------LYLATCSS----DHTVKVFNLDRNLK--K-----DDSH--------SQKGTL-IAELKG 64 (318)
Q Consensus 15 ~v~~~~~~~~g----------~~l~s~s~----D~~v~vwd~~~~~~--~-----~~~~--------~~~~~~-~~~~~~ 64 (318)
+..++.|.|+. .+|+.|+. .+.|.|+++.-+.. . .+.+ ...+++ ......
T Consensus 47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 126 (430)
T 2xyi_A 47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKIN 126 (430)
T ss_dssp CCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEEE
T ss_pred CceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEEc
Confidence 45777777765 46777764 45678886531100 0 0000 112222 355668
Q ss_pred cccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC--------CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN--------GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG 136 (318)
Q Consensus 65 h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~--------~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~ 136 (318)
|.+.|++++|++ ..+.+||+++.||.|++||+.. +.......+.+|...|.+++|+|+. ..+|++|+.||
T Consensus 127 h~~~v~~l~~~p-~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~dg 204 (430)
T 2xyi_A 127 HEGEVNRARYMP-QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNL-NGYLLSASDDH 204 (430)
T ss_dssp ESSCCSEEEEET-TEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTS-TTEEEEECTTS
T ss_pred CCCcEEEEEECC-CCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCC-CCeEEEEeCCC
Confidence 999999999974 3478999999999999999875 1123445567899999999999984 22899999999
Q ss_pred eEEEEEeecCCCCcc----eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe-EE
Q psy2762 137 TISFLTYMSDTNSWE----SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-WI 211 (318)
Q Consensus 137 ~i~i~~~~~~~~~~~----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~-~~ 211 (318)
.|++|++........ ...+.+|...+.+++|+|.. ...|++++.|+.|++||++.+. ..
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~----------------~~~l~s~~~dg~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH----------------ESLFGSVADDQKLMIWDTRNNNTSK 268 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC----------------TTEEEEEETTSEEEEEETTCSCSSS
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC----------------CCEEEEEeCCCeEEEEECCCCCCCc
Confidence 999999855321111 23345788999999999942 3689999999999999988652 11
Q ss_pred EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEeCCC
Q psy2762 212 EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDN 290 (318)
Q Consensus 212 ~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~~D~ 290 (318)
....+..|...|++++|+|+ ...+|++++.|++|++||+..... ....+..|...|.+++|+|+++ +|++++.|+
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~---~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPY---SEFILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp CSEEEECCSSCEEEEEECSS---CTTEEEEEETTSEEEEEETTCTTS-CSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred ceeEeecCCCCeEEEEeCCC---CCCEEEEEeCCCeEEEEeCCCCCC-CeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 23455689999999999996 345799999999999999986432 2345667889999999999995 699999999
Q ss_pred eEEEEEECCC
Q psy2762 291 SVSLWKENTD 300 (318)
Q Consensus 291 ~v~iW~~~~~ 300 (318)
.|+||++...
T Consensus 345 ~i~iwd~~~~ 354 (430)
T 2xyi_A 345 RLHVWDLSKI 354 (430)
T ss_dssp CCEEEEGGGT
T ss_pred cEEEEeCCCC
Confidence 9999998763
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2e-26 Score=211.28 Aligned_cols=241 Identities=11% Similarity=0.059 Sum_probs=187.2
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE-EEEEC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSY 88 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~ 88 (318)
.+|.+.|.+++|+|+++++++++.|++|++||+. .++.+..+..|...+.+++|++ +++++ ++++.
T Consensus 166 ~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~-----------~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~ 232 (433)
T 3bws_A 166 KKKLGFVETISIPEHNELWVSQMQANAVHVFDLK-----------TLAYKATVDLTGKWSKILLYDP--IRDLVYCSNWI 232 (433)
T ss_dssp HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT-----------TCCEEEEEECSSSSEEEEEEET--TTTEEEEEETT
T ss_pred cccCCceeEEEEcCCCEEEEEECCCCEEEEEECC-----------CceEEEEEcCCCCCeeEEEEcC--CCCEEEEEecC
Confidence 4899999999999999999999999999999986 3456778889999999999974 46666 55558
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee--------cCCeEEEEEeecCCCCcceeeeccccc
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS--------SDGTISFLTYMSDTNSWESRKIAAHTI 160 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs--------~d~~i~i~~~~~~~~~~~~~~~~~h~~ 160 (318)
|+.|++||+.+++.. ..+.. ...+.+++|+|+ +.++++++ .|+.|++||+... +......|..
T Consensus 233 ~~~i~~~d~~~~~~~--~~~~~-~~~~~~~~~~~~--g~~l~~~~~~~~~~~~~dg~i~~~d~~~~----~~~~~~~~~~ 303 (433)
T 3bws_A 233 SEDISVIDRKTKLEI--RKTDK-IGLPRGLLLSKD--GKELYIAQFSASNQESGGGRLGIYSMDKE----KLIDTIGPPG 303 (433)
T ss_dssp TTEEEEEETTTTEEE--EECCC-CSEEEEEEECTT--SSEEEEEEEESCTTCSCCEEEEEEETTTT----EEEEEEEEEE
T ss_pred CCcEEEEECCCCcEE--EEecC-CCCceEEEEcCC--CCEEEEEECCCCccccCCCeEEEEECCCC----cEEeeccCCC
Confidence 999999999877543 33443 455899999998 55676666 4889999997433 2233335566
Q ss_pred ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762 161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240 (318)
Q Consensus 161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 240 (318)
.+..++|+|+. ...+++++.|+.|++||+.+++... .+ .+...+.+++|+|+ +.+|+
T Consensus 304 ~~~~~~~~~~g----------------~~l~~~~~~~~~v~v~d~~~~~~~~--~~-~~~~~~~~~~~s~d----g~~l~ 360 (433)
T 3bws_A 304 NKRHIVSGNTE----------------NKIYVSDMCCSKIEVYDLKEKKVQK--SI-PVFDKPNTIALSPD----GKYLY 360 (433)
T ss_dssp CEEEEEECSST----------------TEEEEEETTTTEEEEEETTTTEEEE--EE-ECSSSEEEEEECTT----SSEEE
T ss_pred CcceEEECCCC----------------CEEEEEecCCCEEEEEECCCCcEEE--Ee-cCCCCCCeEEEcCC----CCEEE
Confidence 77889999963 1356788999999999998876543 33 36677999999996 77777
Q ss_pred EEeC---------------CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC-CCeEEEEEEC
Q psy2762 241 SCSQ---------------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKEN 298 (318)
Q Consensus 241 s~s~---------------D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~-D~~v~iW~~~ 298 (318)
+++. ||.|++||..+... ...+ .....+.+++|+|||++|++++. |++|++|+++
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV--KEFW-EAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE--EEEE-ECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcE--EEEe-cCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 7776 57999999876431 2222 23567899999999999998875 9999999976
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=1.5e-25 Score=202.82 Aligned_cols=241 Identities=11% Similarity=0.046 Sum_probs=179.4
Q ss_pred CCCcceeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-EEE
Q psy2762 10 TGHEDMIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-SCS 87 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-s~s 87 (318)
.+|. .+.+++|+|+|++| ++++.|++|++||+. .++.+..+..|. .|.+++|++ ++++|+ +++
T Consensus 29 ~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~-----------~~~~~~~~~~~~-~v~~~~~sp--dg~~l~~~~~ 93 (391)
T 1l0q_A 29 PVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTA-----------TNNVIATVPAGS-SPQGVAVSP--DGKQVYVTNM 93 (391)
T ss_dssp ECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETT-----------TTEEEEEEECSS-SEEEEEECT--TSSEEEEEET
T ss_pred ecCC-CcceEEECCCCCEEEEECCCCCeEEEEECC-----------CCeEEEEEECCC-CccceEECC--CCCEEEEEEC
Confidence 4454 58999999999987 677799999999986 356677776655 899999974 477665 555
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
.|++|++||+.+++.... +. +...+.+++|+|++ ..++++++.|+.|.+||..... ....+..| ..+..++|
T Consensus 94 ~~~~v~v~d~~~~~~~~~--~~-~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~-~~~~~~~~ 165 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGT--VK-TGKSPLGLALSPDG-KKLYVTNNGDKTVSVINTVTKA---VINTVSVG-RSPKGIAV 165 (391)
T ss_dssp TTTEEEEEETTTTEEEEE--EE-CSSSEEEEEECTTS-SEEEEEETTTTEEEEEETTTTE---EEEEEECC-SSEEEEEE
T ss_pred CCCEEEEEECCCCeEEEE--Ee-CCCCcceEEECCCC-CEEEEEeCCCCEEEEEECCCCc---EEEEEecC-CCcceEEE
Confidence 679999999998764433 33 34578999999983 2344788889999999974332 12223333 45688999
Q ss_pred CCCCCCCccccccCCCCCCccceE-EEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe---
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRL-VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS--- 243 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~l-asgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s--- 243 (318)
+|+ +.+| ++++.|+.|++||+.+++..... .+...+.+++|+|+ +.+|++++
T Consensus 166 ~~d-----------------g~~l~~~~~~~~~v~~~d~~~~~~~~~~---~~~~~~~~~~~~~~----g~~l~~~~~~~ 221 (391)
T 1l0q_A 166 TPD-----------------GTKVYVANFDSMSISVIDTVTNSVIDTV---KVEAAPSGIAVNPE----GTKAYVTNVDK 221 (391)
T ss_dssp CTT-----------------SSEEEEEETTTTEEEEEETTTTEEEEEE---ECSSEEEEEEECTT----SSEEEEEEECS
T ss_pred CCC-----------------CCEEEEEeCCCCEEEEEECCCCeEEEEE---ecCCCccceEECCC----CCEEEEEecCc
Confidence 997 3444 78899999999999887654332 24567899999996 77777777
Q ss_pred CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEE-EEEeCCCeEEEEEECCC
Q psy2762 244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDIL-TVSCGDNSVSLWKENTD 300 (318)
Q Consensus 244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l-~s~~~D~~v~iW~~~~~ 300 (318)
.|+.|++||+..... ...+..+ ..+.+++|+|||++| ++++.|+.|++||...+
T Consensus 222 ~~~~v~~~d~~~~~~--~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKI--TARIPVG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp SCCEEEEEETTTTEE--EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCcEEEEECCCCeE--EEEEecC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 799999999976532 2233333 457899999999987 56678999999998765
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.1e-26 Score=211.17 Aligned_cols=241 Identities=14% Similarity=0.083 Sum_probs=184.6
Q ss_pred ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEE-----EecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA-----ELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~-----~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
..+.+++|+|++.++++++.|++|++||+.. ++.+. .+.+|.+.|++++|++ ++.++++++.
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~-----------g~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~ 189 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINS-----------GQTVRLSPPEKYKKKLGFVETISIPE--HNELWVSQMQ 189 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTT-----------CCEEEECCCHHHHTTCCEEEEEEEGG--GTEEEEEEGG
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCC-----------CeEeeecCcccccccCCceeEEEEcC--CCEEEEEECC
Confidence 3566899999888899999999999999863 34444 4568999999999953 5899999999
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG 168 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 168 (318)
|+.|++||+.+++... .+..|...+.+++|+|++ ..++++++.|+.|.+||+.... ....+ .+...+..++|+
T Consensus 190 d~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~i~~~d~~~~~---~~~~~-~~~~~~~~~~~~ 262 (433)
T 3bws_A 190 ANAVHVFDLKTLAYKA--TVDLTGKWSKILLYDPIR-DLVYCSNWISEDISVIDRKTKL---EIRKT-DKIGLPRGLLLS 262 (433)
T ss_dssp GTEEEEEETTTCCEEE--EEECSSSSEEEEEEETTT-TEEEEEETTTTEEEEEETTTTE---EEEEC-CCCSEEEEEEEC
T ss_pred CCEEEEEECCCceEEE--EEcCCCCCeeEEEEcCCC-CEEEEEecCCCcEEEEECCCCc---EEEEe-cCCCCceEEEEc
Confidence 9999999998876433 455788899999999984 3444666689999999974332 12222 233457889999
Q ss_pred CCCCCCccccccCCCCCCccceEEEec--------CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762 169 PGIGSLSELDLKGSKLGGVAKRLVSGG--------CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240 (318)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~lasgs--------~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 240 (318)
|+ +.+|++++ .|+.|++||+.+++.... ..|...+.+++|+|+ ...+++
T Consensus 263 ~~-----------------g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~---g~~l~~ 319 (433)
T 3bws_A 263 KD-----------------GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT---IGPPGNKRHIVSGNT---ENKIYV 319 (433)
T ss_dssp TT-----------------SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE---EEEEECEEEEEECSS---TTEEEE
T ss_pred CC-----------------CCEEEEEECCCCccccCCCeEEEEECCCCcEEee---ccCCCCcceEEECCC---CCEEEE
Confidence 97 45677777 588999999988765333 245557899999997 235678
Q ss_pred EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC---------------CCeEEEEEECCC
Q psy2762 241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG---------------DNSVSLWKENTD 300 (318)
Q Consensus 241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~---------------D~~v~iW~~~~~ 300 (318)
+++.|+.|++|+..+.. ......+...+.+++|+|+|++|++++. ||.|++||...+
T Consensus 320 ~~~~~~~v~v~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 320 SDMCCSKIEVYDLKEKK---VQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp EETTTTEEEEEETTTTE---EEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred EecCCCEEEEEECCCCc---EEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC
Confidence 88999999999998643 1222246678999999999999998886 579999997664
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=2.6e-26 Score=206.28 Aligned_cols=226 Identities=13% Similarity=0.123 Sum_probs=154.2
Q ss_pred eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG 136 (318)
Q Consensus 57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~ 136 (318)
..+.+++.|.+.|++++|++ +|++||+|+.|+ ++||+..+..... .... ..+..+++.++. +.++++++.|+
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~--dg~~la~g~~~~-~~iw~~~~~~~~~--~~~~--~~~~~~~~~~~~-~~~~~~~~~d~ 81 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQ--DQSCLILSTLKS-FEIYNVHPVAHIM--SQEM--RHLSKVRMLHRT-NYVAFVTGVKE 81 (355)
T ss_dssp ---------CCCCCEEEECT--TSSEEEEECSSE-EEEEEETTEEEEE--EEEC--SCCCEEEECTTS-SEEEEECSSTT
T ss_pred CCccccccCCCceEEEEECC--CCCEEEEEcCCE-EEEEecCCcceee--eeec--CCeEEEEEcCCC-CEEEEEECCcc
Confidence 45667789999999999974 589999988765 7899987654322 2222 247778888863 44557788899
Q ss_pred eEEEEEeecCCCCcceeeecccccccceeeeCCCCC------CCccccccCC--CCCC----c------cceEEE--ecC
Q psy2762 137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG------SLSELDLKGS--KLGG----V------AKRLVS--GGC 196 (318)
Q Consensus 137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~------~~~~~~~~~~--~~~~----~------~~~las--gs~ 196 (318)
+|++||...+. ....+ .|..++..+.|+++.. .+...++... .... . ..++|. |+.
T Consensus 82 ~v~iWd~~~~~---~~~~~-~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~ 157 (355)
T 3vu4_A 82 VVHIWDDVKKQ---DVSRI-KVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFN 157 (355)
T ss_dssp EEEEEETTTTE---EEEEE-ECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSC
T ss_pred EEEEEECCCCc---EEEEE-ECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCc
Confidence 99999974432 12222 3666788888887521 0111111111 0000 0 024444 799
Q ss_pred CCeEEEEEccCCeE-------------EE-EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe-EEEEEcCCCcceee
Q psy2762 197 DNLIKIWKQEGDKW-------------IE-ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK-VIIWTSNDYVTWTP 261 (318)
Q Consensus 197 d~~i~iwd~~~~~~-------------~~-~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~-i~vw~~~~~~~~~~ 261 (318)
||.|++||+.++.. .+ ...+.+|...|++++|+|+ +.+|++++.|++ |+|||+.+... .
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~----g~~l~s~s~d~~~v~iwd~~~~~~--~ 231 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK----SDMVATCSQDGTIIRVFKTEDGVL--V 231 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT----SSEEEEEETTCSEEEEEETTTCCE--E
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC----CCEEEEEeCCCCEEEEEECCCCcE--E
Confidence 99999999886430 11 4567899999999999996 889999999998 99999987542 3
Q ss_pred EEee-e-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 262 FIMN-T-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 262 ~~~~-~-~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
..+. + |...|.+++|+|||++|++++.|++|+||+++..
T Consensus 232 ~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 232 REFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 3444 4 8899999999999999999999999999998664
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=2.6e-24 Score=194.65 Aligned_cols=227 Identities=14% Similarity=0.108 Sum_probs=170.8
Q ss_pred CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE-EEEECCCeEEEEeCCCCcEEE
Q psy2762 26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSYDRKVIIWRGDNGNWFK 104 (318)
Q Consensus 26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~Dg~v~vWd~~~~~~~~ 104 (318)
.++++++.|++|++||+. .++++..+..|. .+.+++|++ ++++| ++++.|++|++||+.+++...
T Consensus 3 ~l~vs~~~d~~v~v~d~~-----------~~~~~~~~~~~~-~~~~~~~s~--dg~~l~~~~~~d~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVT-----------SNKVTATIPVGS-NPMGAVISP--DGTKVYVANAHSNDVSIIDTATNNVIA 68 (391)
T ss_dssp EEEEEETTTTEEEEEETT-----------TTEEEEEEECSS-SEEEEEECT--TSSEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EEEEEcCCCCEEEEEECC-----------CCeEEEEeecCC-CcceEEECC--CCCEEEEECCCCCeEEEEECCCCeEEE
Confidence 467889999999999986 356777887775 489999974 47665 777799999999998876544
Q ss_pred EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCC
Q psy2762 105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184 (318)
Q Consensus 105 ~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~ 184 (318)
. +..+ ..+.+++|+|++ ..++++++.++.|++||...+. ......+...+..++|+|+
T Consensus 69 ~--~~~~-~~v~~~~~spdg-~~l~~~~~~~~~v~v~d~~~~~----~~~~~~~~~~~~~~~~s~d-------------- 126 (391)
T 1l0q_A 69 T--VPAG-SSPQGVAVSPDG-KQVYVTNMASSTLSVIDTTSNT----VAGTVKTGKSPLGLALSPD-------------- 126 (391)
T ss_dssp E--EECS-SSEEEEEECTTS-SEEEEEETTTTEEEEEETTTTE----EEEEEECSSSEEEEEECTT--------------
T ss_pred E--EECC-CCccceEECCCC-CEEEEEECCCCEEEEEECCCCe----EEEEEeCCCCcceEEECCC--------------
Confidence 3 3333 489999999984 2344666678999999974332 2222234456788999997
Q ss_pred CCccceE-EEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE-EEEeCCCeEEEEEcCCCcceeeE
Q psy2762 185 GGVAKRL-VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI-ASCSQDRKVIIWTSNDYVTWTPF 262 (318)
Q Consensus 185 ~~~~~~l-asgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~vw~~~~~~~~~~~ 262 (318)
+++| ++++.|+.|++||+.+++... .+..| ..+.+++|+|+ +.+| ++++.|+.|++||+.... ..
T Consensus 127 ---g~~l~~~~~~~~~v~~~d~~~~~~~~--~~~~~-~~~~~~~~~~d----g~~l~~~~~~~~~v~~~d~~~~~---~~ 193 (391)
T 1l0q_A 127 ---GKKLYVTNNGDKTVSVINTVTKAVIN--TVSVG-RSPKGIAVTPD----GTKVYVANFDSMSISVIDTVTNS---VI 193 (391)
T ss_dssp ---SSEEEEEETTTTEEEEEETTTTEEEE--EEECC-SSEEEEEECTT----SSEEEEEETTTTEEEEEETTTTE---EE
T ss_pred ---CCEEEEEeCCCCEEEEEECCCCcEEE--EEecC-CCcceEEECCC----CCEEEEEeCCCCEEEEEECCCCe---EE
Confidence 3445 789999999999998876543 34444 45799999996 5555 788899999999997753 22
Q ss_pred EeeecCCcEEEEEEcCCCCEEEEEe---CCCeEEEEEECCCC
Q psy2762 263 IMNTFDDVVWNVSWSLTGDILTVSC---GDNSVSLWKENTDG 301 (318)
Q Consensus 263 ~~~~~~~~v~~v~~spdg~~l~s~~---~D~~v~iW~~~~~~ 301 (318)
....+...+..++|+|+|++|++++ .|+.|++||...+.
T Consensus 194 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 194 DTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred EEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 2234566899999999999999888 68999999987653
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.8e-24 Score=198.52 Aligned_cols=239 Identities=13% Similarity=0.137 Sum_probs=181.0
Q ss_pred cCCCcceeeeeeecC--------------CCCEEEEeeCC------CcEEEEEcCCCcCCCCCCCCcceEEEEecccccC
Q psy2762 9 DTGHEDMIHDAEMDY--------------LGLYLATCSSD------HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP 68 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~--------------~g~~l~s~s~D------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~ 68 (318)
..+|...++.+++++ .+.+|+.++.+ ++|++||++. .....+.+|.+.
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g------------~~~~~l~~~~~~ 180 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG------------YNQFVVHRSPQP 180 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS------------CSCEEEEEESSC
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC------------CCCEEEeCCCCc
Confidence 467888888877765 26677776655 7999999862 224667789999
Q ss_pred eEEEEecCCCCCcEEEEEECCC---eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEE-EeecCCe--EEEEE
Q psy2762 69 VWQVAWAHPQFGTLLASCSYDR---KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA-CGSSDGT--ISFLT 142 (318)
Q Consensus 69 V~~v~~~~~~~~~~las~s~Dg---~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~la-sgs~d~~--i~i~~ 142 (318)
|.+++|++ +|++|++++.|+ .|++||+.+++.. .+..|...+.+++|+|+ +..++ +++.++. |.+||
T Consensus 181 v~~~~~Sp--dg~~la~~s~~~~~~~i~~~d~~tg~~~---~l~~~~~~~~~~~~spd--g~~la~~~~~~g~~~i~~~d 253 (415)
T 2hqs_A 181 LMSPAWSP--DGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPD--GSKLAFALSKTGSLNLYVMD 253 (415)
T ss_dssp EEEEEECT--TSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEE
T ss_pred ceeeEEcC--CCCEEEEEEecCCCcEEEEEECCCCcEE---EeecCCCcccCEEEcCC--CCEEEEEEecCCCceEEEEE
Confidence 99999974 599999999986 9999999887643 34567888999999999 55555 6666665 77787
Q ss_pred eecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC-CC--eEEEEEccCCeEEEEEEcccC
Q psy2762 143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DN--LIKIWKQEGDKWIEETKLENH 219 (318)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~--~i~iwd~~~~~~~~~~~~~~h 219 (318)
.... ....+..|...+..++|+|+ +++|+.++. ++ .|++||+.+++. ..+..|
T Consensus 254 ~~~~----~~~~l~~~~~~~~~~~~spd-----------------g~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~ 309 (415)
T 2hqs_A 254 LASG----QIRQVTDGRSNNTEPTWFPD-----------------SQNLAFTSDQAGRPQVYKVNINGGAP---QRITWE 309 (415)
T ss_dssp TTTC----CEEECCCCSSCEEEEEECTT-----------------SSEEEEEECTTSSCEEEEEETTSSCC---EECCCS
T ss_pred CCCC----CEEeCcCCCCcccceEECCC-----------------CCEEEEEECCCCCcEEEEEECCCCCE---EEEecC
Confidence 6432 23556678788899999997 467777775 45 577778877653 334567
Q ss_pred CCCeeEEEEccCCCCCccEEEEEeCC---CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC---eEE
Q psy2762 220 SDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN---SVS 293 (318)
Q Consensus 220 ~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~---~v~ 293 (318)
...+.+++|+|+ |.+|++++.+ ..|++|++.+... ..+..+. .+.+++|+|||++|++++.|+ .|.
T Consensus 310 ~~~~~~~~~spd----G~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~ 381 (415)
T 2hqs_A 310 GSQNQDADVSSD----GKFMVMVSSNGGQQHIAKQDLATGGV---QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLN 381 (415)
T ss_dssp SSEEEEEEECTT----SSEEEEEEECSSCEEEEEEETTTCCE---EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred CCcccCeEECCC----CCEEEEEECcCCceEEEEEECCCCCE---EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEE
Confidence 778999999996 7888888765 6899999987542 3344443 789999999999999998877 788
Q ss_pred EEEEC
Q psy2762 294 LWKEN 298 (318)
Q Consensus 294 iW~~~ 298 (318)
+|+++
T Consensus 382 ~~d~~ 386 (415)
T 2hqs_A 382 LVSTD 386 (415)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 89865
No 127
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=7.3e-23 Score=181.07 Aligned_cols=270 Identities=12% Similarity=0.110 Sum_probs=177.6
Q ss_pred CCcceeeeeeecCCCCEEEEeeCC-CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC-
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSD-HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY- 88 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D-~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~- 88 (318)
.|...+..++|+|+|++|++++.+ +.|++|+++.. ......+..+..+. .+..++|++ ++++|++++.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~s~--dg~~l~~~~~~ 104 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD-------DGALTFAAESALPG-SLTHISTDH--QGQFVFVGSYN 104 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT-------TCCEEEEEEEECSS-CCSEEEECT--TSSEEEEEETT
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCC-------CCceeeccccccCC-CCcEEEEcC--CCCEEEEEecC
Confidence 467789999999999999998887 99999998611 01223445555444 788999974 4787766665
Q ss_pred CCeEEEEeCCCCcE-EEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCccee--eecc-cccccc
Q psy2762 89 DRKVIIWRGDNGNW-FKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESR--KIAA-HTIGCN 163 (318)
Q Consensus 89 Dg~v~vWd~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~--~~~~-h~~~v~ 163 (318)
++.|.+||+..+.. .....+. ....+.+++|+|+ +..+++++ .++.|.+|++.......... .... ....+.
T Consensus 105 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
T 1ri6_A 105 AGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPD--NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR 181 (343)
T ss_dssp TTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTT--SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE
T ss_pred CCeEEEEECCCCcccccccccc-CCCCceEEEECCC--CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcc
Confidence 88999999853322 1222333 3346889999998 44455555 89999999985422111111 1222 233566
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceE-EEecCCCeEEEEEccC--CeEEEEEE---cc-cC--CCCeeEEEEccCCCC
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRL-VSGGCDNLIKIWKQEG--DKWIEETK---LE-NH--SDWVRDVAWAPSWGL 234 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~l-asgs~d~~i~iwd~~~--~~~~~~~~---~~-~h--~~~V~~v~~sp~~~~ 234 (318)
.++|+|+ +.+| +++..++.|++|++.. ++...... +. ++ ...+..++|+|+
T Consensus 182 ~~~~~pd-----------------g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d--- 241 (343)
T 1ri6_A 182 HMVFHPN-----------------EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD--- 241 (343)
T ss_dssp EEEECTT-----------------SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT---
T ss_pred eEEECCC-----------------CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC---
Confidence 7899997 3444 5566899999999853 33221211 22 11 235678999997
Q ss_pred CccEEE-EEeCCCeEEEEEcCC--CcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECC-CCceEEEeee
Q psy2762 235 SKCMIA-SCSQDRKVIIWTSND--YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENT-DGAWQCITEM 309 (318)
Q Consensus 235 ~~~~l~-s~s~D~~i~vw~~~~--~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~-~~~~~~~~~~ 309 (318)
+.+|+ +...|+.|++|++.. ........+... ..+..++|+|||++|++++ .|+.+++|+++. +|.++.+.++
T Consensus 242 -g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 242 -GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp -SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred -CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 55554 666899999999973 111112222223 3388999999999988887 589999998875 4677777776
Q ss_pred cccccc
Q psy2762 310 GKTSEQ 315 (318)
Q Consensus 310 ~~~~~~ 315 (318)
..-..+
T Consensus 320 ~~g~~p 325 (343)
T 1ri6_A 320 AVGQGP 325 (343)
T ss_dssp ECSSSC
T ss_pred ccCCCC
Confidence 553333
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=3.4e-22 Score=189.33 Aligned_cols=260 Identities=14% Similarity=0.140 Sum_probs=186.3
Q ss_pred eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC--CCCCcEEE
Q psy2762 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH--PQFGTLLA 84 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~--~~~~~~la 84 (318)
.+..||. ++.++|+|+|++|++++.|++|++||+.. .+++++.++.. ...+..++|++ ..+|++|+
T Consensus 174 ~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~---------~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 174 VIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWA---------KEPTKVAEIKI-GIEARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp EEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTS---------SSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEE
T ss_pred EEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcC---------CCCcEEEEEec-CCCcceEEeCCCcCCCCCEEE
Confidence 3444555 88999999999999999999999999931 13567777774 45679999974 00489999
Q ss_pred EEEC-CCeEEEEeCCCCcEEEEEEecC--------CCc-CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762 85 SCSY-DRKVIIWRGDNGNWFKYYEYNN--------HDS-SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK 154 (318)
Q Consensus 85 s~s~-Dg~v~vWd~~~~~~~~~~~~~~--------h~~-~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~ 154 (318)
++++ +++|.|||..+.+.+.+....+ |.. .+.++.++|+. ..++++...++.|.+||+..... .....
T Consensus 242 v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~-~~~~vs~~~~g~i~vvd~~~~~~-l~~~~ 319 (543)
T 1nir_A 242 AGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH-PEFIVNVKETGKVLLVNYKDIDN-LTVTS 319 (543)
T ss_dssp EEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEECTTSSS-CEEEE
T ss_pred EEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC-CEEEEEECCCCeEEEEEecCCCc-ceeEE
Confidence 9885 8999999998877655443321 223 78999999975 56788888899999999854332 11112
Q ss_pred ecccccccceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCCeEEEEEEcc--cCCCCeeEEEEccC
Q psy2762 155 IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGDKWIEETKLE--NHSDWVRDVAWAPS 231 (318)
Q Consensus 155 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~~~~~~~~~~--~h~~~V~~v~~sp~ 231 (318)
+ .+...+..+.|+|+ +++ ++++..+++|++||..++++....... .|......+ ++|+
T Consensus 320 i-~~~~~~~~~~~spd-----------------g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~ 380 (543)
T 1nir_A 320 I-GAAPFLHDGGWDSS-----------------HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPK 380 (543)
T ss_dssp E-ECCSSCCCEEECTT-----------------SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETT
T ss_pred e-ccCcCccCceECCC-----------------CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCC
Confidence 2 34455778899997 355 455667899999999998765443321 254433333 4675
Q ss_pred CCCCccEEEEEe-CCCeEEEEEcCCCc----ce-eeEEeeecCCcEEEEEEcCCCCEEEEEe-------CCCeEEEEEEC
Q psy2762 232 WGLSKCMIASCS-QDRKVIIWTSNDYV----TW-TPFIMNTFDDVVWNVSWSLTGDILTVSC-------GDNSVSLWKEN 298 (318)
Q Consensus 232 ~~~~~~~l~s~s-~D~~i~vw~~~~~~----~~-~~~~~~~~~~~v~~v~~spdg~~l~s~~-------~D~~v~iW~~~ 298 (318)
.+..++|++ .|++|.||+..... .| ....+..+...+..|+|+|||++|++++ .+++|++||++
T Consensus 381 ---~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 381 ---YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp ---TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred ---CccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence 367788876 68999999987621 01 2345666777888999999999999987 27799999988
Q ss_pred CCCc
Q psy2762 299 TDGA 302 (318)
Q Consensus 299 ~~~~ 302 (318)
+...
T Consensus 458 ~~~~ 461 (543)
T 1nir_A 458 NLDA 461 (543)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 7543
No 129
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=1.6e-21 Score=173.75 Aligned_cols=263 Identities=9% Similarity=0.090 Sum_probs=176.6
Q ss_pred CCcceeeeeeecCCCCEEEEeeC---CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSS---DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~---D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s 87 (318)
.+...+..++|+|+|+ |++++. ++.|.+|++... ....+..+..|...+..++|++ ++++|++++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g---------~~~~~~~~~~~~~~p~~~a~sp--dg~~l~~~~ 104 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ---------TAHKLNTVVAPGTPPAYVAVDE--ARQLVYSAN 104 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT---------EEEEEEEEEEESCCCSEEEEET--TTTEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC---------cEEEeeeeecCCCCCEEEEECC--CCCEEEEEe
Confidence 3456778899999999 555443 689999999632 2235566667888899999974 588888888
Q ss_pred -CCCeEEEEeCC-CCcEEEEEEecC---------CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec
Q psy2762 88 -YDRKVIIWRGD-NGNWFKYYEYNN---------HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA 156 (318)
Q Consensus 88 -~Dg~v~vWd~~-~~~~~~~~~~~~---------h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~ 156 (318)
.+++|.+|++. .+.......+.. +...+.+++|+|+ +.++++...++.|.+|++.............
T Consensus 105 ~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd--g~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~ 182 (347)
T 3hfq_A 105 YHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD--NRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT 182 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT--SCEEEEETTTTEEEEEEECTTSCEEEEEEEE
T ss_pred CCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC--CcEEEEeCCCCEEEEEEECCCCcEEEeeeEE
Confidence 67999999985 333333333321 1224889999999 4477777788999999985221111111111
Q ss_pred c-cccccceeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC--CeEEEEEEcccCC------CCeeEE
Q psy2762 157 A-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG--DKWIEETKLENHS------DWVRDV 226 (318)
Q Consensus 157 ~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~--~~~~~~~~~~~h~------~~V~~v 226 (318)
. .......++|+|+ ++ .+++...++.|++|+++. +++.....+.... ..+..+
T Consensus 183 ~~~g~~p~~~~~spd-----------------g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 245 (347)
T 3hfq_A 183 MEAGFGPRHLVFSPD-----------------GQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAI 245 (347)
T ss_dssp CCTTCCEEEEEECTT-----------------SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEE
T ss_pred cCCCCCCceEEECCC-----------------CCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeE
Confidence 1 1224567899997 34 445567789999999874 5543333333222 348899
Q ss_pred EEccCCCCCccEE-EEEeCCCeEEEEEcCCCcce-eeEEeeecCCcEEEEEEcCCCCEEEEEeCC-CeEEEEEECC-CCc
Q psy2762 227 AWAPSWGLSKCMI-ASCSQDRKVIIWTSNDYVTW-TPFIMNTFDDVVWNVSWSLTGDILTVSCGD-NSVSLWKENT-DGA 302 (318)
Q Consensus 227 ~~sp~~~~~~~~l-~s~s~D~~i~vw~~~~~~~~-~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-~~v~iW~~~~-~~~ 302 (318)
+|+|+ |++| ++...++.|.+|++...... ....+..+...+..++|+|||++|++++.+ +.+++|+++. +|+
T Consensus 246 ~~spd----G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 246 RLSHD----GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp EECTT----SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred EECCC----CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 99997 6655 66677999999998632111 122333344568899999999999888764 8999998875 456
Q ss_pred eEEEee
Q psy2762 303 WQCITE 308 (318)
Q Consensus 303 ~~~~~~ 308 (318)
...+..
T Consensus 322 l~~~~~ 327 (347)
T 3hfq_A 322 LSLLQK 327 (347)
T ss_dssp EEEEEE
T ss_pred EEeccc
Confidence 554443
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=5.4e-23 Score=177.51 Aligned_cols=237 Identities=14% Similarity=0.104 Sum_probs=172.7
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-ccCeEEEEecCCCCCcEEEEEE-
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-SGPVWQVAWAHPQFGTLLASCS- 87 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~~~~~~~~las~s- 87 (318)
..|...|.+++|+|+|++|++++ ++.|.+||+... ++......+| ...|.+++|++ ++++|++++
T Consensus 38 ~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~----------~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~~~~ 104 (297)
T 2ojh_A 38 WQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD----------PSPEKVDTGFATICNNDHGISP--DGALYAISDK 104 (297)
T ss_dssp EEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSC----------CSCEECCCTTCCCBCSCCEECT--TSSEEEEEEC
T ss_pred ccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCC----------CCceEeccccccccccceEECC--CCCEEEEEEe
Confidence 45888999999999999999987 889999998730 2333444455 47789999974 589999999
Q ss_pred -CCCeEEEEeC--CCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEE-EeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762 88 -YDRKVIIWRG--DNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA-CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN 163 (318)
Q Consensus 88 -~Dg~v~vWd~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~la-sgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~ 163 (318)
.++.++||.+ .++. ...+.. ...+.+++|+|+ +..++ +++.++.+.+|++..... ....+..|...+.
T Consensus 105 ~~~~~~~l~~~~~~~~~---~~~~~~-~~~~~~~~~spd--g~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~ 176 (297)
T 2ojh_A 105 VEFGKSAIYLLPSTGGT---PRLMTK-NLPSYWHGWSPD--GKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGEGRND 176 (297)
T ss_dssp TTTSSCEEEEEETTCCC---CEECCS-SSSEEEEEECTT--SSEEEEEEEETTEEEEEEEETTTC--CEEECCCSSSCEE
T ss_pred CCCCcceEEEEECCCCc---eEEeec-CCCccceEECCC--CCEEEEEECCCCceEEEEEECCCC--cceEcccCCCccc
Confidence 4456677654 4433 122333 345899999998 44444 788899999999754432 2345556777888
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceEEEec-CCCeEEEEEcc-CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDNLIKIWKQE-GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~~i~iwd~~-~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s 241 (318)
.+.|+|+ +.+|+.++ .++.++||++. .+. ....+..|...+.++.|+|+ +.+|+.
T Consensus 177 ~~~~s~d-----------------g~~l~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~s~d----g~~l~~ 233 (297)
T 2ojh_A 177 GPDYSPD-----------------GRWIYFNSSRTGQMQIWRVRVDGS--SVERITDSAYGDWFPHPSPS----GDKVVF 233 (297)
T ss_dssp EEEECTT-----------------SSEEEEEECTTSSCEEEEEETTSS--CEEECCCCSEEEEEEEECTT----SSEEEE
T ss_pred cceECCC-----------------CCEEEEEecCCCCccEEEECCCCC--CcEEEecCCcccCCeEECCC----CCEEEE
Confidence 9999997 35566554 68999999876 222 23456678888999999996 788888
Q ss_pred EeCC-----------CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762 242 CSQD-----------RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN 290 (318)
Q Consensus 242 ~s~D-----------~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~ 290 (318)
++.| ..|.+|++.+........+..+...+..++|+|||++|++++.|.
T Consensus 234 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 234 VSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 8876 569999998754322333446777899999999999999887654
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=3.1e-22 Score=183.54 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=169.3
Q ss_pred cCCCcceeeeeeecCCCCEEEEeeCCC---cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATCSSDH---TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA- 84 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la- 84 (318)
..+|.+.|.+++|+|+|++|++++.|+ +|++||+.. ++. ..+..|.+.+.+++|++ +|++|+
T Consensus 174 l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t-----------g~~-~~l~~~~~~~~~~~~sp--dg~~la~ 239 (415)
T 2hqs_A 174 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN-----------GAV-RQVASFPRHNGAPAFSP--DGSKLAF 239 (415)
T ss_dssp EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-----------CCE-EEEECCSSCEEEEEECT--TSSEEEE
T ss_pred EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC-----------CcE-EEeecCCCcccCEEEcC--CCCEEEE
Confidence 357899999999999999999999886 999999963 333 35677889999999974 588777
Q ss_pred EEECCCe--EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-CC--eEEEEEeecCCCCcceeeecccc
Q psy2762 85 SCSYDRK--VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-DG--TISFLTYMSDTNSWESRKIAAHT 159 (318)
Q Consensus 85 s~s~Dg~--v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-d~--~i~i~~~~~~~~~~~~~~~~~h~ 159 (318)
+++.|+. |.+||+.+++. ..+..|...+.+++|+|+ +..+++++. ++ .|.+|+.... ....+..|.
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spd--g~~l~~~s~~~g~~~i~~~d~~~~----~~~~l~~~~ 310 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPD--SQNLAFTSDQAGRPQVYKVNINGG----APQRITWEG 310 (415)
T ss_dssp EECTTSSCEEEEEETTTCCE---EECCCCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTSS----CCEECCCSS
T ss_pred EEecCCCceEEEEECCCCCE---EeCcCCCCcccceEECCC--CCEEEEEECCCCCcEEEEEECCCC----CEEEEecCC
Confidence 6666665 99999987753 345678889999999999 666766665 55 4555554322 233444566
Q ss_pred cccceeeeCCCCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCc
Q psy2762 160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSK 236 (318)
Q Consensus 160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~ 236 (318)
..+..++|+|+ +++|+.++.+ ..|++||+.+++. ..+..|. .+.+++|+|+ +
T Consensus 311 ~~~~~~~~spd-----------------G~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~~~~-~~~~~~~spd----g 365 (415)
T 2hqs_A 311 SQNQDADVSSD-----------------GKFMVMVSSNGGQQHIAKQDLATGGV---QVLSSTF-LDETPSLAPN----G 365 (415)
T ss_dssp SEEEEEEECTT-----------------SSEEEEEEECSSCEEEEEEETTTCCE---EECCCSS-SCEEEEECTT----S
T ss_pred CcccCeEECCC-----------------CCEEEEEECcCCceEEEEEECCCCCE---EEecCCC-CcCCeEEcCC----C
Confidence 67788999997 4678877764 5899999988764 2345554 7999999996 7
Q ss_pred cEEEEEeCCC---eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC
Q psy2762 237 CMIASCSQDR---KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD 281 (318)
Q Consensus 237 ~~l~s~s~D~---~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~ 281 (318)
.+|++++.|+ .|.+|++.+.. ...+..+...|.+++|+|.-.
T Consensus 366 ~~l~~~s~~~~~~~l~~~d~~g~~---~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 366 TMVIYSSSQGMGSVLNLVSTDGRF---KARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp SEEEEEEEETTEEEEEEEETTSCC---EEECCCSSSEEEEEEECCCCC
T ss_pred CEEEEEEcCCCccEEEEEECCCCc---EEEeeCCCCCCcCCccccccc
Confidence 8888888877 79999987543 456677889999999999643
No 132
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=6.1e-23 Score=180.46 Aligned_cols=158 Identities=14% Similarity=0.100 Sum_probs=114.2
Q ss_pred CCcceeeeeeecC---CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc---cCeEEEEecCCCCCcEE-
Q psy2762 11 GHEDMIHDAEMDY---LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS---GPVWQVAWAHPQFGTLL- 83 (318)
Q Consensus 11 gH~~~v~~~~~~~---~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~---~~V~~v~~~~~~~~~~l- 83 (318)
+|...|+.++|++ ++.+|+|||.|++|||||+. +++++.++.+|. ..|.+++|++ +|.++
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~-----------TGk~l~tL~g~~~~v~~v~~vafSp--dG~~lv 242 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK-----------TGQLLKKMHIDDSYQASVCHKAYSE--MGLLFI 242 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT-----------TCCEEEEEECCC---CCCEEEEEEE--TTEEEE
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC-----------CCcEEEEEcCCCcceeeeEEEEECC--CCCEEE
Confidence 4555555555555 45678899999999999997 467889998754 4577778974 47765
Q ss_pred -----------EEEECCCeEEEEeCCCCcEEEEEEe---cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCC
Q psy2762 84 -----------ASCSYDRKVIIWRGDNGNWFKYYEY---NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS 149 (318)
Q Consensus 84 -----------as~s~Dg~v~vWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~ 149 (318)
+||+.|++|++||..+++...+..+ .+|...+.+.+++ +.++|+++.|++|+|||+..+.
T Consensus 243 s~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s----g~~lASgS~DgTIkIWDl~tGk-- 316 (356)
T 2w18_A 243 VLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK----DHCAAAILTSGTIAIWDLLLGQ-- 316 (356)
T ss_dssp EEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE----TTEEEEEETTSCEEEEETTTCS--
T ss_pred EeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC----CCEEEEEcCCCcEEEEECCCCc--
Confidence 7789999999999998875443322 3666655544444 4589999999999999985543
Q ss_pred cceeeecccccccc-eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEc
Q psy2762 150 WESRKIAAHTIGCN-AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ 205 (318)
Q Consensus 150 ~~~~~~~~h~~~v~-~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~ 205 (318)
....+.+|...+. .++|+|+ +++||+|+.|++|||||.
T Consensus 317 -~l~tL~gH~~~vvs~vafSPD-----------------G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 317 -CTALLPPVSDQHWSFVKWSGT-----------------DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -EEEEECCC--CCCCEEEECSS-----------------SSEEEEECTTSCEEEEEE
T ss_pred -EEEEecCCCCCeEEEEEECCC-----------------CCEEEEEECCCcEEEecC
Confidence 3456678877655 5899997 578999999999999985
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=2.8e-20 Score=164.35 Aligned_cols=248 Identities=12% Similarity=0.119 Sum_probs=162.8
Q ss_pred CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC-CeEEEEeCC--CCcE
Q psy2762 26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD-RKVIIWRGD--NGNW 102 (318)
Q Consensus 26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D-g~v~vWd~~--~~~~ 102 (318)
.++++++.|+.|++||++.. .....+.. ..|...+.+++|++ ++++|++++.+ +.|++|++. ++..
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~sp--dg~~l~~~~~~~~~v~~~~~~~~~~~~ 74 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHE--------GALTLTQV-VDVPGQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGAL 74 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTT--------SCEEEEEE-EECSSCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEeCCCCCeEEEEEECCC--------CcEEEeee-EecCCCCceEEECC--CCCEEEEeecCCCeEEEEEecCCCCce
Confidence 34555588999999998521 11133333 34777899999974 58888888887 999999987 5554
Q ss_pred EEEEEecCCCcCeEEEEeeCCCCCcEE-EEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccC
Q psy2762 103 FKYYEYNNHDSSVNSIAWAPKEFGLIL-ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181 (318)
Q Consensus 103 ~~~~~~~~h~~~v~~v~~~p~~~~~~l-asgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~ 181 (318)
.....+..+. .+.+++|+|+ +.++ +++..++.|.+|++..+. .............+..++|+|+
T Consensus 75 ~~~~~~~~~~-~~~~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~s~d----------- 139 (343)
T 1ri6_A 75 TFAAESALPG-SLTHISTDHQ--GQFVFVGSYNAGNVSVTRLEDGL-PVGVVDVVEGLDGCHSANISPD----------- 139 (343)
T ss_dssp EEEEEEECSS-CCSEEEECTT--SSEEEEEETTTTEEEEEEEETTE-EEEEEEEECCCTTBCCCEECTT-----------
T ss_pred eeccccccCC-CCcEEEEcCC--CCEEEEEecCCCeEEEEECCCCc-cccccccccCCCCceEEEECCC-----------
Confidence 4444454433 7889999998 5545 444558899999985211 1111222223335778899997
Q ss_pred CCCCCccceEEEec-CCCeEEEEEccC-CeEEEEE--Eccc-CCCCeeEEEEccCCCCCccEE-EEEeCCCeEEEEEcCC
Q psy2762 182 SKLGGVAKRLVSGG-CDNLIKIWKQEG-DKWIEET--KLEN-HSDWVRDVAWAPSWGLSKCMI-ASCSQDRKVIIWTSND 255 (318)
Q Consensus 182 ~~~~~~~~~lasgs-~d~~i~iwd~~~-~~~~~~~--~~~~-h~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~vw~~~~ 255 (318)
+++|++++ .++.|++||+.. ++..... .+.. ....+..+.|+|+ +.+| +++..++.|++|++..
T Consensus 140 ------g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd----g~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 140 ------NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN----EQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp ------SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT----SSEEEEEETTTTEEEEEESSC
T ss_pred ------CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC----CCEEEEEeCCCCEEEEEEecC
Confidence 34566555 899999999886 5443222 2222 3346889999996 6655 4555899999999854
Q ss_pred Cc-cee-eEEeeec------CCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECC-CCceEEEeee
Q psy2762 256 YV-TWT-PFIMNTF------DDVVWNVSWSLTGDILTVSC-GDNSVSLWKENT-DGAWQCITEM 309 (318)
Q Consensus 256 ~~-~~~-~~~~~~~------~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~-~~~~~~~~~~ 309 (318)
.. ... ....... ...+..++|+|||++|+.+. .|+.|++|+++. ++.+..+..+
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~ 273 (343)
T 1ri6_A 210 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ 273 (343)
T ss_dssp TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee
Confidence 21 111 1111111 23577899999999887554 799999999985 4455655544
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=5.7e-22 Score=194.09 Aligned_cols=242 Identities=9% Similarity=0.087 Sum_probs=175.2
Q ss_pred cceeeeeeecCCCCEEEEeeC-CC-----cEEEEEcCCCcCCCCCCCCcceEEEEecccc--------------------
Q psy2762 13 EDMIHDAEMDYLGLYLATCSS-DH-----TVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-------------------- 66 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~-D~-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-------------------- 66 (318)
...|..++|+|||++|++++. |+ +|++||++. ++....+..|.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-----------GQTRLLVDSKVVLPGTETLSDEEKARRERQR 104 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT-----------CCEEEEECGGGTC------------------
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC-----------CceeEccchhhcccccccccchhhhhhhhhh
Confidence 457899999999999999998 88 999999863 33344444433
Q ss_pred ----cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC---cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEE
Q psy2762 67 ----GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG---NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS 139 (318)
Q Consensus 67 ----~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~ 139 (318)
..|.+++|++ ||++|++++. +.|.+||+.++ ... .+..|...+.+++|+|+ +..++.++ ++.|.
T Consensus 105 ~~~~~~v~~~~~Sp--Dg~~l~~~~~-~~i~~~d~~~~~~~~~~---~l~~~~~~~~~~~~SPD--G~~la~~~-~~~i~ 175 (741)
T 2ecf_A 105 IAAMTGIVDYQWSP--DAQRLLFPLG-GELYLYDLKQEGKAAVR---QLTHGEGFATDAKLSPK--GGFVSFIR-GRNLW 175 (741)
T ss_dssp --CCEESCCCEECT--TSSEEEEEET-TEEEEEESSSCSTTSCC---BCCCSSSCEEEEEECTT--SSEEEEEE-TTEEE
T ss_pred hccccCcceeEECC--CCCEEEEEeC-CcEEEEECCCCCcceEE---EcccCCcccccccCCCC--CCEEEEEe-CCcEE
Confidence 2378999974 5999999886 99999999876 422 34567788999999999 67788776 56899
Q ss_pred EEEeecCCCCcceeeec-cccc----------------ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC----
Q psy2762 140 FLTYMSDTNSWESRKIA-AHTI----------------GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN---- 198 (318)
Q Consensus 140 i~~~~~~~~~~~~~~~~-~h~~----------------~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~---- 198 (318)
+|+...+. ...+. .+.. .+..++|+|+ +++|++++.|+
T Consensus 176 ~~d~~~g~----~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD-----------------g~~l~~~~~d~~~~~ 234 (741)
T 2ecf_A 176 VIDLASGR----QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD-----------------DSAIAYARIDESPVP 234 (741)
T ss_dssp EEETTTTE----EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT-----------------SSCEEEEEEECTTSC
T ss_pred EEecCCCC----EEEeccCCccceeccccceeeeeccccccceEECCC-----------------CCEEEEEEEcCCCCc
Confidence 99874321 22222 2221 1477899997 46677776665
Q ss_pred -----------------------------eEEEEEccC-CeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC----
Q psy2762 199 -----------------------------LIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ---- 244 (318)
Q Consensus 199 -----------------------------~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~---- 244 (318)
.|++||+.+ ++.........|...+..++| |+ |++|+.++.
T Consensus 235 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pD----g~~l~~~~~~~~~ 309 (741)
T 2ecf_A 235 VQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RD----PQHLSFQRQSRDQ 309 (741)
T ss_dssp EEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EE----TTEEEEEEEETTS
T ss_pred eEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CC----CCEEEEEEecccC
Confidence 788899887 754322211257788999999 96 777876654
Q ss_pred -CCeEEEEEcCCCcceeeEEeeecC-C---cEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 245 -DRKVIIWTSNDYVTWTPFIMNTFD-D---VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 245 -D~~i~vw~~~~~~~~~~~~~~~~~-~---~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
+..|++||+.+.... ..+..+. . .+.+++|+|||++|++++.|+.++||..+..+.
T Consensus 310 ~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~ 370 (741)
T 2ecf_A 310 KKLDLVEVTLASNQQR--VLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK 370 (741)
T ss_dssp SEEEEEEEETTTCCEE--EEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC
T ss_pred CeEEEEEEECCCCceE--EEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC
Confidence 678999999875421 2222222 2 356899999999999999999999999875444
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3.1e-21 Score=177.93 Aligned_cols=266 Identities=14% Similarity=0.152 Sum_probs=175.4
Q ss_pred CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceE-----EEEecccccCeEEEEecCCCCCcEEE--
Q psy2762 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTL-----IAELKGHSGPVWQVAWAHPQFGTLLA-- 84 (318)
Q Consensus 12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~-----~~~~~~h~~~V~~v~~~~~~~~~~la-- 84 (318)
+...++.+++++++.++++++.|+ ++||+................. ...+ .|.+.|++++|++ ++++||
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~sp--dg~~lav~ 110 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSC--DNLTLSAC 110 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECT--TSCEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcC--CCCEEEEE
Confidence 445688999999999999999887 9999864211100000000011 1112 3677899999974 589999
Q ss_pred --EEECCCeEEEEeCCCC--------cE-EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762 85 --SCSYDRKVIIWRGDNG--------NW-FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR 153 (318)
Q Consensus 85 --s~s~Dg~v~vWd~~~~--------~~-~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~ 153 (318)
+|+.|++|+|||+.+. +. .....+.+|...|.+++|+|+. +.++++++.|++|++||+.... ...
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~las~s~Dg~v~iwD~~~~~---~~~ 186 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV-PSMVAVCLADGSIAVLQVTETV---KVC 186 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC-TTEEEEEETTSCEEEEEESSSE---EEE
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC-CCEEEEEECCCeEEEEEcCCCc---cee
Confidence 8999999999997543 11 1233456799999999999974 5689999999999999985442 223
Q ss_pred eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc-----cCCCCeeEEEE
Q psy2762 154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE-----NHSDWVRDVAW 228 (318)
Q Consensus 154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~-----~h~~~V~~v~~ 228 (318)
...+|...+.+++|+|+ +++|++|+.|++|++||.+. +........ .|...|.+++|
T Consensus 187 ~~~~~~~~v~~v~wspd-----------------g~~lasgs~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 187 ATLPSTVAVTSVCWSPK-----------------GKQLAVGKQNGTVVQYLPTL-QEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp EEECGGGCEEEEEECTT-----------------SSCEEEEETTSCEEEECTTC-CEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred eccCCCCceeEEEEcCC-----------------CCEEEEEcCCCcEEEEccCC-cccccccCCcccCCCCceeEEEEEE
Confidence 34468889999999997 57899999999999999873 322221111 23347999999
Q ss_pred ccCCCCCccEEEE-EeCCC------eEEEEEcCCCcceeeE---Eee-------ecCCcEEEEEEcCCCCEEEEEeC-CC
Q psy2762 229 APSWGLSKCMIAS-CSQDR------KVIIWTSNDYVTWTPF---IMN-------TFDDVVWNVSWSLTGDILTVSCG-DN 290 (318)
Q Consensus 229 sp~~~~~~~~l~s-~s~D~------~i~vw~~~~~~~~~~~---~~~-------~~~~~v~~v~~spdg~~l~s~~~-D~ 290 (318)
+++ +.++++ .+.|+ .+++|++.+.....+. ... ....+-..+.+-+|.++|+.++. .+
T Consensus 249 ~~~----~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~ 324 (434)
T 2oit_A 249 IGT----YVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAST 324 (434)
T ss_dssp EET----TEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCS
T ss_pred ecC----ceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCC
Confidence 995 455543 43443 3899998764211011 111 11122234445578778776664 66
Q ss_pred eEEEEEECCCC-ceEEEe
Q psy2762 291 SVSLWKENTDG-AWQCIT 307 (318)
Q Consensus 291 ~v~iW~~~~~~-~~~~~~ 307 (318)
.|.|.....++ .|.+..
T Consensus 325 dv~vl~~~~~~~~~~~~~ 342 (434)
T 2oit_A 325 EVSILARQSDQINWESWL 342 (434)
T ss_dssp BCEEEEECTTSSCEEEEE
T ss_pred ceeEEEecCCCCccEEEe
Confidence 78888865543 475543
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1e-20 Score=179.29 Aligned_cols=246 Identities=13% Similarity=0.144 Sum_probs=175.6
Q ss_pred eecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeC--
Q psy2762 20 EMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRG-- 97 (318)
Q Consensus 20 ~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~-- 97 (318)
+|+|++.++++++.|++|.+||.. +++++.++..+.. +..++|++ ++++|++++.|++|++||+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~-----------t~~~~~~i~~g~~-~~~v~~sp--dg~~l~v~~~d~~V~v~D~~~ 209 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGD-----------SKKIVKVIDTGYA-VHISRMSA--SGRYLLVIGRDARIDMIDLWA 209 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETT-----------TCCEEEEEECSTT-EEEEEECT--TSCEEEEEETTSEEEEEETTS
T ss_pred ccCCCCEEEEEEcCCCeEEEEECC-----------CceEEEEEecCcc-cceEEECC--CCCEEEEECCCCeEEEEECcC
Confidence 489999999999999999999986 4567888873333 88999974 5999999999999999999
Q ss_pred CCCcEEEEEEecCCCcCeEEEEeeC----CCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecc----------ccc-c
Q psy2762 98 DNGNWFKYYEYNNHDSSVNSIAWAP----KEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAA----------HTI-G 161 (318)
Q Consensus 98 ~~~~~~~~~~~~~h~~~v~~v~~~p----~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~----------h~~-~ 161 (318)
.+.+. ..++. +...+..++|+| + +.++++++ .+++|.+||..... .+..+.. |.. .
T Consensus 210 ~t~~~--~~~i~-~g~~p~~va~sp~~~~d--g~~l~v~~~~~~~v~v~D~~t~~---~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 210 KEPTK--VAEIK-IGIEARSVESSKFKGYE--DRYTIAGAYWPPQFAIMDGETLE---PKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp SSCEE--EEEEE-CCSEEEEEEECCSTTCT--TTEEEEEEEESSEEEEEETTTCC---EEEEEECCEECSSSCCEESCCC
T ss_pred CCCcE--EEEEe-cCCCcceEEeCCCcCCC--CCEEEEEEccCCeEEEEeccccc---cceeecccCcccCccccccCCc
Confidence 66553 33444 445679999999 8 56666666 58999999864332 1222222 222 4
Q ss_pred cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE-
Q psy2762 162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA- 240 (318)
Q Consensus 162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~- 240 (318)
+..+.++|+. ..++++...++.|.+||..+.+......+ .+...+.++.|+|+ +++|+
T Consensus 282 v~~i~~s~~~----------------~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spd----g~~l~v 340 (543)
T 1nir_A 282 VAAIIASHEH----------------PEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSS----HRYFMT 340 (543)
T ss_dssp EEEEEECSSS----------------SEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTT----SCEEEE
T ss_pred eEEEEECCCC----------------CEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCC----CCEEEE
Confidence 6677788753 35788999999999999876543222233 35667889999996 66555
Q ss_pred EEeCCCeEEEEEcCCCcceeeEEee----ecCCcEEEEEEcCC-CCEEEEEe-CCCeEEEEEECCCCc----eEEEeeec
Q psy2762 241 SCSQDRKVIIWTSNDYVTWTPFIMN----TFDDVVWNVSWSLT-GDILTVSC-GDNSVSLWKENTDGA----WQCITEMG 310 (318)
Q Consensus 241 s~s~D~~i~vw~~~~~~~~~~~~~~----~~~~~v~~v~~spd-g~~l~s~~-~D~~v~iW~~~~~~~----~~~~~~~~ 310 (318)
++..+++|.+||..+... ...+. .|......+ ++|+ |+.++++. .|++|++|++++.+. |++++.+.
T Consensus 341 a~~~~~~v~v~D~~tg~l--~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 341 AANNSNKVAVIDSKDRRL--SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EEGGGTEEEEEETTTTEE--EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred EecCCCeEEEEECCCCeE--EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE
Confidence 555689999999987542 22222 244333333 5787 67777765 689999999988554 88887775
Q ss_pred c
Q psy2762 311 K 311 (318)
Q Consensus 311 ~ 311 (318)
.
T Consensus 418 ~ 418 (543)
T 1nir_A 418 G 418 (543)
T ss_dssp C
T ss_pred c
Confidence 3
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.6e-20 Score=161.92 Aligned_cols=230 Identities=16% Similarity=0.142 Sum_probs=164.9
Q ss_pred EeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC-CcEEEEEEe
Q psy2762 30 TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN-GNWFKYYEY 108 (318)
Q Consensus 30 s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~-~~~~~~~~~ 108 (318)
+++.|++|++||+.. ++ ...+..|.+.|.+++|++ ++++|++++ ++.|.+||+.+ ++.... .
T Consensus 17 ~~~~~~~i~~~d~~~-----------~~-~~~~~~~~~~v~~~~~sp--dg~~l~~~~-~~~i~~~d~~~~~~~~~~--~ 79 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRT-----------RK-MRVVWQTPELFEAPNWSP--DGKYLLLNS-EGLLYRLSLAGDPSPEKV--D 79 (297)
T ss_dssp -CCCCEEEEEEETTT-----------TE-EEEEEEESSCCEEEEECT--TSSEEEEEE-TTEEEEEESSSCCSCEEC--C
T ss_pred CCCcceeEEEEeCCC-----------Cc-eeeeccCCcceEeeEECC--CCCEEEEEc-CCeEEEEeCCCCCCceEe--c
Confidence 467899999999863 33 345667899999999974 589999987 88999999988 654332 3
Q ss_pred cCC-CcCeEEEEeeCCCCCcEEEEee--cCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCC
Q psy2762 109 NNH-DSSVNSIAWAPKEFGLILACGS--SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG 185 (318)
Q Consensus 109 ~~h-~~~v~~v~~~p~~~~~~lasgs--~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~ 185 (318)
..+ ...+.+++|+|+ +.++++++ .++.+.||.+..... ....+..+ ..+..++|+|+
T Consensus 80 ~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~-~~~~~~~~spd--------------- 139 (297)
T 2ojh_A 80 TGFATICNNDHGISPD--GALYAISDKVEFGKSAIYLLPSTGG--TPRLMTKN-LPSYWHGWSPD--------------- 139 (297)
T ss_dssp CTTCCCBCSCCEECTT--SSEEEEEECTTTSSCEEEEEETTCC--CCEECCSS-SSEEEEEECTT---------------
T ss_pred cccccccccceEECCC--CCEEEEEEeCCCCcceEEEEECCCC--ceEEeecC-CCccceEECCC---------------
Confidence 344 467899999998 66788877 446777877654332 12233333 34778899997
Q ss_pred CccceEE-EecCCCeEEEEEcc--CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe-CCCeEEEEEcCCCcceee
Q psy2762 186 GVAKRLV-SGGCDNLIKIWKQE--GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTP 261 (318)
Q Consensus 186 ~~~~~la-sgs~d~~i~iwd~~--~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~vw~~~~~~~~~~ 261 (318)
+++|+ +++.|+.++||+++ +++ ...+..|...+.++.|+|+ +.+|+.++ .|+.++||++.... ...
T Consensus 140 --g~~l~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~s~d----g~~l~~~~~~~~~~~i~~~~~~~-~~~ 209 (297)
T 2ojh_A 140 --GKSFTYCGIRDQVFDIYSMDIDSGV---ETRLTHGEGRNDGPDYSPD----GRWIYFNSSRTGQMQIWRVRVDG-SSV 209 (297)
T ss_dssp --SSEEEEEEEETTEEEEEEEETTTCC---EEECCCSSSCEEEEEECTT----SSEEEEEECTTSSCEEEEEETTS-SCE
T ss_pred --CCEEEEEECCCCceEEEEEECCCCc---ceEcccCCCccccceECCC----CCEEEEEecCCCCccEEEECCCC-CCc
Confidence 35555 78899999999854 333 2445678888999999996 66666655 59999999875322 123
Q ss_pred EEeeecCCcEEEEEEcCCCCEEEEEeCC-----------CeEEEEEECCCCceEEEe
Q psy2762 262 FIMNTFDDVVWNVSWSLTGDILTVSCGD-----------NSVSLWKENTDGAWQCIT 307 (318)
Q Consensus 262 ~~~~~~~~~v~~v~~spdg~~l~s~~~D-----------~~v~iW~~~~~~~~~~~~ 307 (318)
..+..+...+..++|+|||++|+.++.+ +.|.+|+...+ +...+.
T Consensus 210 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~~~ 265 (297)
T 2ojh_A 210 ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG-NVETLF 265 (297)
T ss_dssp EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC-SCEEEE
T ss_pred EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC-Cceeee
Confidence 4455566789999999999999988866 56999997654 444443
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=5.5e-20 Score=162.40 Aligned_cols=249 Identities=8% Similarity=0.015 Sum_probs=165.7
Q ss_pred CCcceeeeeeecCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceE-EEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTL-IAELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
.+...+ .++|+|+|++|+.++. ++.|.+||+.. ++. ...+..+..+..+++|++ ++++|+++..
T Consensus 38 ~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~-----------~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~ 103 (331)
T 3u4y_A 38 LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL-----------EPPKVVAIQEGQSSMADVDITP--DDQFAVTVTG 103 (331)
T ss_dssp CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS-----------SSCEEEEEEECSSCCCCEEECT--TSSEEEECCC
T ss_pred ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC-----------CceeEEecccCCCCccceEECC--CCCEEEEecC
Confidence 345566 8999999997766665 89999999863 233 566667777776689964 5888885555
Q ss_pred CC---eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe-EEEEEeecCCCCcce-eeecccccccc
Q psy2762 89 DR---KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT-ISFLTYMSDTNSWES-RKIAAHTIGCN 163 (318)
Q Consensus 89 Dg---~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~-i~i~~~~~~~~~~~~-~~~~~h~~~v~ 163 (318)
++ .|.+||+.+++.... +. +.....+++|+|++ ..++++...++. |.+|++......... ...........
T Consensus 104 ~~~~~~i~v~d~~~~~~~~~--~~-~~~~~~~~~~spdg-~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 179 (331)
T 3u4y_A 104 LNHPFNMQSYSFLKNKFIST--IP-IPYDAVGIAISPNG-NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPF 179 (331)
T ss_dssp SSSSCEEEEEETTTTEEEEE--EE-CCTTEEEEEECTTS-SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEE
T ss_pred CCCcccEEEEECCCCCeEEE--EE-CCCCccceEECCCC-CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCcc
Confidence 53 999999988765443 33 23456899999984 236666666678 999998533211111 11112334467
Q ss_pred eeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccCCeE-EEEEEcccCCCCeeEEEEccCCCCCccEE-E
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEGDKW-IEETKLENHSDWVRDVAWAPSWGLSKCMI-A 240 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~~~~-~~~~~~~~h~~~V~~v~~sp~~~~~~~~l-~ 240 (318)
.++|+|+ ++ .++++..++.|++||+.+++. .....+.. ...+..++|+|+ +.+| +
T Consensus 180 ~~~~spd-----------------g~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spd----g~~l~v 237 (331)
T 3u4y_A 180 NITFTPD-----------------GNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRD----GSTVYV 237 (331)
T ss_dssp EEEECTT-----------------SSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTT----SSEEEE
T ss_pred ceEECCC-----------------CCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCC----CCEEEE
Confidence 8899997 34 456666789999999887654 11233333 355789999997 6655 4
Q ss_pred EEeCCCeEEEEEcCCCcceeeEEeeec----CC---cEEEEEEcCCCCEEEEEeC-CCeEEEEEECC
Q psy2762 241 SCSQDRKVIIWTSNDYVTWTPFIMNTF----DD---VVWNVSWSLTGDILTVSCG-DNSVSLWKENT 299 (318)
Q Consensus 241 s~s~D~~i~vw~~~~~~~~~~~~~~~~----~~---~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~ 299 (318)
+...++.|.+||..+............ .. ....++|+|||++|+.++. +++|++|++..
T Consensus 238 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 238 LTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp ECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred EEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 445688899999876532111111111 11 2345899999999876665 66999999765
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=2.1e-21 Score=185.21 Aligned_cols=232 Identities=8% Similarity=0.027 Sum_probs=171.2
Q ss_pred cceeeeeeecCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-cCeEEEEecCCCCCcEEEEEEC--
Q psy2762 13 EDMIHDAEMDYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-GPVWQVAWAHPQFGTLLASCSY-- 88 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~~~~las~s~-- 88 (318)
..+|++++|+|||++||+++. ||+++||+++. +. ...+..|. ..|..++|+ | + +++++++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~-----------g~-~~~lt~~~~~~~~~~~~s-p-d-~~l~~~~~~~ 85 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG-----------GE-TVKLNREPINSVLDPHYG-V-G-RVILVRDVSK 85 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEET-----------TE-EEECCSSCCSEECEECTT-C-S-EEEEEEECST
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcC-----------CC-cEeeecccccccccccCC-C-C-eEEEEeccCC
Confidence 557999999999999999887 99999999852 33 34555555 689999997 4 3 78887775
Q ss_pred -CCeEEEEeCCC---CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762 89 -DRKVIIWRGDN---GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA 164 (318)
Q Consensus 89 -Dg~v~vWd~~~---~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~ 164 (318)
+...+||.+.. +.. . .+.. ...+...+|+|+....++++++.++.+ +|++..+. ...+..+.. ..
T Consensus 86 g~~~~~l~~~~~~~~g~~-~--~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~-l~d~~~g~----~~~l~~~~~--~~ 154 (582)
T 3o4h_A 86 GAEQHALFKVNTSRPGEE-Q--RLEA-VKPMRILSGVDTGEAVVFTGATEDRVA-LYALDGGG----LRELARLPG--FG 154 (582)
T ss_dssp TSCCEEEEEEETTSTTCC-E--ECTT-SCSBEEEEEEECSSCEEEEEECSSCEE-EEEEETTE----EEEEEEESS--CE
T ss_pred CCcceEEEEEeccCCCcc-c--cccC-CCCceeeeeCCCCCeEEEEecCCCCce-EEEccCCc----EEEeecCCC--ce
Confidence 56667765432 221 1 2222 223446788888655667766666654 99885432 333443333 78
Q ss_pred eeeCCCCCCCccccccCCCCCCccceEEEecCC----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762 165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240 (318)
Q Consensus 165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 240 (318)
++|+|+ +++||+++.| +.|++||+.+++.. .+..|...+..++|||+ |+.|+
T Consensus 155 ~~~spD-----------------G~~la~~~~~~~~~~~i~~~d~~~g~~~---~l~~~~~~~~~~~~SpD----G~~l~ 210 (582)
T 3o4h_A 155 FVSDIR-----------------GDLIAGLGFFGGGRVSLFTSNLSSGGLR---VFDSGEGSFSSASISPG----MKVTA 210 (582)
T ss_dssp EEEEEE-----------------TTEEEEEEEEETTEEEEEEEETTTCCCE---EECCSSCEEEEEEECTT----SCEEE
T ss_pred EEECCC-----------------CCEEEEEEEcCCCCeEEEEEcCCCCCce---EeecCCCccccceECCC----CCEEE
Confidence 889997 5789988877 78999998887642 45788888999999996 88899
Q ss_pred EEeCCC--eEEEEEcCCCcceeeEEeeecCCcEEEEE--------EcCCCCEEEEEeCCCeEEEEEE
Q psy2762 241 SCSQDR--KVIIWTSNDYVTWTPFIMNTFDDVVWNVS--------WSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 241 s~s~D~--~i~vw~~~~~~~~~~~~~~~~~~~v~~v~--------~spdg~~l~s~~~D~~v~iW~~ 297 (318)
++..|+ +|++||+.+... ..+..+...+.+++ |+|||+++++++.|++++||++
T Consensus 211 ~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 211 GLETAREARLVTVDPRDGSV---EDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEECSSCEEEEEECTTTCCE---EECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EccCCCeeEEEEEcCCCCcE---EEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 888898 899999877542 24556666666777 9999999999999999999997
No 140
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=4e-19 Score=159.17 Aligned_cols=257 Identities=12% Similarity=0.125 Sum_probs=170.0
Q ss_pred CcceeeeeeecCCCCEEEEeeCC----CcEEEEEcCCCcCCCCCCCCcc--eEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762 12 HEDMIHDAEMDYLGLYLATCSSD----HTVKVFNLDRNLKKDDSHSQKG--TLIAELKGHSGPVWQVAWAHPQFGTLLAS 85 (318)
Q Consensus 12 H~~~v~~~~~~~~g~~l~s~s~D----~~v~vwd~~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~v~~~~~~~~~~las 85 (318)
|...+..++|+|+|++|++++.+ +.|.+|+++.. ++ ..+.....+......+++ ++++|++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~---------~g~~~~~~~~~~~~~~p~~~~~----dg~~l~~ 114 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE---------KGTLHLLNTQKTMGADPCYLTT----NGKNIVT 114 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT---------TTEEEEEEEEECSSSCEEEEEE----CSSEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC---------CCcEEEeeEeccCCCCcEEEEE----CCCEEEE
Confidence 56677889999999999999886 89999998621 13 234445555666777776 3677777
Q ss_pred EE-CCCeEEEEeCCCCcEE----EEEEecC--------CCcCeEEEEeeCCCCCc-EEEEeecCCeEEEEEeecCCC---
Q psy2762 86 CS-YDRKVIIWRGDNGNWF----KYYEYNN--------HDSSVNSIAWAPKEFGL-ILACGSSDGTISFLTYMSDTN--- 148 (318)
Q Consensus 86 ~s-~Dg~v~vWd~~~~~~~----~~~~~~~--------h~~~v~~v~~~p~~~~~-~lasgs~d~~i~i~~~~~~~~--- 148 (318)
++ .+++|.+|++...... ......+ +...+.+++|+|+ +. ++++...++.|.+|++.....
T Consensus 115 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~v~v~~~~~~~~~~~ 192 (361)
T 3scy_A 115 ANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD--GKYLLADDLGTDQIHKFNINPNANADN 192 (361)
T ss_dssp EETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred EECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC--CCEEEEEeCCCCEEEEEEEcCCCCccc
Confidence 76 5789999998643211 1111111 1234578999998 54 555555688999999854432
Q ss_pred -C-cce----ee-ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec-CCCeEEEEEccCCeEEEEEEc---c
Q psy2762 149 -S-WES----RK-IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDNLIKIWKQEGDKWIEETKL---E 217 (318)
Q Consensus 149 -~-~~~----~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~~i~iwd~~~~~~~~~~~~---~ 217 (318)
. ... .. ...+......++|+|+ +++|++++ .++.|++|++.++++.....+ .
T Consensus 193 ~~~l~~~~~~~~~~~~~~~~~~~~~~spd-----------------g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~ 255 (361)
T 3scy_A 193 KEKFLTKGTPEAFKVAPGSGPRHLIFNSD-----------------GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT 255 (361)
T ss_dssp CCCCEEEEEEEEEECCTTCCEEEEEECTT-----------------SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS
T ss_pred ccceeecccccceecCCCCCCeEEEEcCC-----------------CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC
Confidence 1 111 11 1223345678899997 45565555 689999999987765333333 3
Q ss_pred cCCCCeeEEEEccCCCCCccEEEEEeC--CCeEEEEEcCC--CcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeE
Q psy2762 218 NHSDWVRDVAWAPSWGLSKCMIASCSQ--DRKVIIWTSND--YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSV 292 (318)
Q Consensus 218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~--D~~i~vw~~~~--~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v 292 (318)
.+......++|+|+ |++|+++.. ++.|++|++.. ........... ...+..++|+|||++|++++ .++.|
T Consensus 256 ~~~~~~~~i~~spd----g~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v 330 (361)
T 3scy_A 256 VNAQGSGDIHLSPD----GKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVI 330 (361)
T ss_dssp SCCCCEEEEEECTT----SSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred CCCCCcccEEECCC----CCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCE
Confidence 34455789999996 777766555 48999999862 11111122222 45678999999999998888 67899
Q ss_pred EEEEECC-CCceEE
Q psy2762 293 SLWKENT-DGAWQC 305 (318)
Q Consensus 293 ~iW~~~~-~~~~~~ 305 (318)
++|+++. +|+...
T Consensus 331 ~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 331 QIFERDQATGLLTD 344 (361)
T ss_dssp EEEEECTTTCCEEE
T ss_pred EEEEEECCCCcEee
Confidence 9998875 444443
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=2.5e-21 Score=188.96 Aligned_cols=239 Identities=11% Similarity=0.095 Sum_probs=164.1
Q ss_pred ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc---CeEEEEecCCCCCcEEEEEECC-
Q psy2762 14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG---PVWQVAWAHPQFGTLLASCSYD- 89 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~v~~~~~~~~~~las~s~D- 89 (318)
..+.+++|+|||+++++ +.||+|++||+.. ++....+..|.. .|.+++|++ ||++|++++.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~-----------g~~~~~~~~~~~~~~~v~~~~~Sp--Dg~~l~~~~~~~ 82 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVET-----------NTSTVLIEGKKIESLRAIRYEISP--DREYALFSYNVE 82 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGG-----------CCCEEEECTTTTTTTTCSEEEECT--TSSEEEEEESCC
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCC-----------CcEEEEeccccccccccceEEECC--CCCEEEEEecCc
Confidence 45788999999998876 7899999999873 344556666665 499999974 59999999875
Q ss_pred --------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-ccccc
Q psy2762 90 --------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTI 160 (318)
Q Consensus 90 --------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~ 160 (318)
+.+.+||+.+++........+|...+..++|+|+ +..+|.++. +.|.+|+...+. ...+ ..+..
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPd--G~~la~~~~-~~i~~~~~~~g~----~~~~~~~~~~ 155 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPK--GQQLIFIFE-NNIYYCAHVGKQ----AIRVVSTGKE 155 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSS--TTCEEEEET-TEEEEESSSSSC----CEEEECCCBT
T ss_pred cceeecceeeEEEEECCCCceEeccCCccccccccccEECCC--CCEEEEEEC-CeEEEEECCCCc----eEEEecCCCC
Confidence 7788999988764332222345556889999999 667887775 789999864432 1222 22222
Q ss_pred c------------------cceeeeCCCCCCCccccccCCCCCCccceEEEecCCC------------------------
Q psy2762 161 G------------------CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN------------------------ 198 (318)
Q Consensus 161 ~------------------v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~------------------------ 198 (318)
. +..++|+|+. ++||+++.|+
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-----------------~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDG-----------------TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY 218 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTS-----------------SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred CceECcccceeEEEEeccCcceEEECCCC-----------------CEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence 2 2679999983 4555555432
Q ss_pred ----------eEEEEEccCCeEEEEEEccc------CCCCeeEEEEccCCCCCccEEEEEeC----CCeEEEEEcCCCcc
Q psy2762 199 ----------LIKIWKQEGDKWIEETKLEN------HSDWVRDVAWAPSWGLSKCMIASCSQ----DRKVIIWTSNDYVT 258 (318)
Q Consensus 199 ----------~i~iwd~~~~~~~~~~~~~~------h~~~V~~v~~sp~~~~~~~~l~s~s~----D~~i~vw~~~~~~~ 258 (318)
.|++||+.+++. ...+.. |...+..+.|||+ |++|++.+. +..|++||+.+...
T Consensus 219 ~~~G~~~~~~~l~~~d~~~~~~--~~~l~~~~~~~~~~~~~~~~~~SpD----g~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 219 PKAGSENPSISLHVIGLNGPTH--DLEMMPPDDPRMREYYITMVKWATS----TKVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp CBTTSCCCEEEEEEEESSSSCC--CEECCCCCCGGGSSEEEEEEEESSS----SEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred CCCCCCCCeeEEEEEECCCCce--eEEeeCCccCCCccceeEEEEEeCC----CeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 799999887653 123333 3667899999996 777876653 36799999877542
Q ss_pred eeeEEe-eecCCcEE----EEEEcCCCCEEEE--EeCCC----eEEEEEEC
Q psy2762 259 WTPFIM-NTFDDVVW----NVSWSLTGDILTV--SCGDN----SVSLWKEN 298 (318)
Q Consensus 259 ~~~~~~-~~~~~~v~----~v~~spdg~~l~s--~~~D~----~v~iW~~~ 298 (318)
. ..+ ..+...+. +++|||||+.|+. +..|+ ..+||..+
T Consensus 293 ~--~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 293 T--KKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp E--EEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred e--EEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 1 222 22334443 7899999998775 44677 55555544
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=1e-19 Score=160.41 Aligned_cols=253 Identities=11% Similarity=0.053 Sum_probs=164.2
Q ss_pred eeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-----cccCeEEEEecCCCCCcEEEEEE-
Q psy2762 15 MIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-----HSGPVWQVAWAHPQFGTLLASCS- 87 (318)
Q Consensus 15 ~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----h~~~V~~v~~~~~~~~~~las~s- 87 (318)
.+..++|+|+|+++ ++++.++.|.+||+.. ++.+..+.. |...+.+++|++ ++++|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~ 101 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVT-----------GETLGRIDLSTPEERVKSLFGAALSP--DGKTLAIYES 101 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTT-----------CCEEEEEECCBTTEEEECTTCEEECT--TSSEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCC-----------CCeEeeEEcCCcccccccccceEECC--CCCEEEEEec
Confidence 48889999999865 5566789999999863 344544442 233677899974 588888886
Q ss_pred -----------CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec
Q psy2762 88 -----------YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA 156 (318)
Q Consensus 88 -----------~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~ 156 (318)
.++.|.+||+.+++..... .. ...+.+++|+|+ +.+++++ ++.|.+||..... ....+.
T Consensus 102 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~--~~-~~~~~~~~~s~d--g~~l~~~--~~~i~~~d~~~~~---~~~~~~ 171 (337)
T 1pby_B 102 PVRLELTHFEVQPTRVALYDAETLSRRKAF--EA-PRQITMLAWARD--GSKLYGL--GRDLHVMDPEAGT---LVEDKP 171 (337)
T ss_dssp EEEECSSCEEECCCEEEEEETTTTEEEEEE--EC-CSSCCCEEECTT--SSCEEEE--SSSEEEEETTTTE---EEEEEC
T ss_pred ccccccccccccCceEEEEECCCCcEEEEE--eC-CCCcceeEECCC--CCEEEEe--CCeEEEEECCCCc---Eeeeee
Confidence 6799999999877644333 22 455788999998 4545555 6789999874332 112222
Q ss_pred ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC----------eEEEEEccCCeEEEEEEcccCCCCeeEE
Q psy2762 157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN----------LIKIWKQEGDKWIEETKLENHSDWVRDV 226 (318)
Q Consensus 157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~----------~i~iwd~~~~~~~~~~~~~~h~~~V~~v 226 (318)
.+. ....+.|+|+...+.......... ......+..++ .|.+||+.+++.. ...+..+...+.++
T Consensus 172 ~~~-~~~~~~~s~dg~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~ 246 (337)
T 1pby_B 172 IQS-WEAETYAQPDVLAVWNQHESSGVM---ATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFST 246 (337)
T ss_dssp STT-TTTTTBCCCBCCCCCCCCTTTTEE---EEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEE
T ss_pred ccc-cCCCceeCCCccEEeeeccCCCce---eeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeE
Confidence 221 112346777642211100000000 00011111222 5899999888754 44556677778999
Q ss_pred EEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762 227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304 (318)
Q Consensus 227 ~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~ 304 (318)
+|+|+ +.+|+++ ++.|++||+.+... ...+ .....+.+++|+|||++|++++.|+.|++||...+....
T Consensus 247 ~~s~d----g~~l~~~--~~~v~~~d~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 247 AVNPA----KTRAFGA--YNVLESFDLEKNAS--IKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EECTT----SSEEEEE--ESEEEEEETTTTEE--EEEE-ECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred EECCC----CCEEEEe--CCeEEEEECCCCcC--ccee-cCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEE
Confidence 99996 7777777 79999999876431 1222 234567899999999999999999999999987764443
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=1.4e-19 Score=160.32 Aligned_cols=238 Identities=11% Similarity=0.026 Sum_probs=160.1
Q ss_pred eeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-cCeEEEEecCCCCCcE-EEEEECCCeEEEE
Q psy2762 18 DAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-GPVWQVAWAHPQFGTL-LASCSYDRKVIIW 95 (318)
Q Consensus 18 ~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~~~~-las~s~Dg~v~vW 95 (318)
.+++++++.++++++.|++|.+||+. +++.+.++..+. ..+..++|++ ++++ +++...++.|.+|
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~-----------~~~~~~~~~~~~~~~~~~~~~s~--dg~~~~v~~~~~~~i~~~ 70 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVA-----------SDTVYKSCVMPDKFGPGTAMMAP--DNRTAYVLNNHYGDIYGI 70 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETT-----------TTEEEEEEECSSCCSSCEEEECT--TSSEEEEEETTTTEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECC-----------CCcEEEEEecCCCCCCceeEECC--CCCEEEEEeCCCCcEEEE
Confidence 46788999999999999999999986 346666666443 2567889974 4665 4566678999999
Q ss_pred eCCCCcEEEEEEecCC----CcCeEEEEeeCCCCCcEEEEeecC------------CeEEEEEeecCCCCcceeeecccc
Q psy2762 96 RGDNGNWFKYYEYNNH----DSSVNSIAWAPKEFGLILACGSSD------------GTISFLTYMSDTNSWESRKIAAHT 159 (318)
Q Consensus 96 d~~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~~lasgs~d------------~~i~i~~~~~~~~~~~~~~~~~h~ 159 (318)
|+.+++......+... ...+.+++|+|+ +.++++++.+ +.|.+||+..+... .......+.
T Consensus 71 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~ 147 (349)
T 1jmx_B 71 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPD--GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-KPVRTFPMP 147 (349)
T ss_dssp ETTTTEEEEEEESCCSTTEEEECSSCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-CCSEEEECC
T ss_pred eCCCCcEEEEEEcccccccccccccceEECCC--CCEEEEEcccccccccccccCCCeEEEEECCCcccc-ceeeeccCC
Confidence 9988764443332211 233788999998 6667777654 89999997543211 111122333
Q ss_pred cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc---------------------
Q psy2762 160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN--------------------- 218 (318)
Q Consensus 160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~--------------------- 218 (318)
..+..++|+|+ ++ ++.++.+ |++||..+++.........
T Consensus 148 ~~~~~~~~s~d-----------------g~-l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (349)
T 1jmx_B 148 RQVYLMRAADD-----------------GS-LYVAGPD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPR 207 (349)
T ss_dssp SSCCCEEECTT-----------------SC-EEEESSS--EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTT
T ss_pred CcccceeECCC-----------------Cc-EEEccCc--EEEEeCCCCceeccccccccCCccccCccceeeecCCCcc
Confidence 45778889997 34 4444443 8888887765433222110
Q ss_pred ---------------------------------------------CCCCeeEEEEcc-CCCCCccEEEEEeCCCeEEEEE
Q psy2762 219 ---------------------------------------------HSDWVRDVAWAP-SWGLSKCMIASCSQDRKVIIWT 252 (318)
Q Consensus 219 ---------------------------------------------h~~~V~~v~~sp-~~~~~~~~l~s~s~D~~i~vw~ 252 (318)
+...+..++|+| + +.+|+++ ++.|.+||
T Consensus 208 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~d----g~~l~~~--~~~v~~~d 281 (349)
T 1jmx_B 208 HEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKD----PNQIYGV--LNRLAKYD 281 (349)
T ss_dssp CEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSC----TTEEEEE--ESEEEEEE
T ss_pred eeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCC----CCEEEEE--cCeEEEEE
Confidence 112345667778 6 6677777 88999999
Q ss_pred cCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
+.+... ...+ .....+..++|+|||++|++++.++.|++||..+.
T Consensus 282 ~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 282 LKQRKL--IKAA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp TTTTEE--EEEE-ECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred CccCeE--EEEE-cCCCCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 977431 1222 23345779999999999998888999999997765
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=9.1e-20 Score=177.58 Aligned_cols=250 Identities=10% Similarity=0.057 Sum_probs=168.8
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc--------------CeEEEEec
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG--------------PVWQVAWA 75 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~--------------~V~~v~~~ 75 (318)
..|...+..++|+|||++|+++ .|+.|.+||+.... ...++.......+.. .+.++.|+
T Consensus 117 ~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~------~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~S 189 (706)
T 2z3z_A 117 FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLG------EGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWS 189 (706)
T ss_dssp ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTT------SCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEEC
T ss_pred cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccc------ccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEEC
Confidence 3467789999999999999985 68999999986300 000122222222222 25789997
Q ss_pred CCCCCcEEEEEE---------------------------------CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeC
Q psy2762 76 HPQFGTLLASCS---------------------------------YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122 (318)
Q Consensus 76 ~~~~~~~las~s---------------------------------~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p 122 (318)
+ ||++|++++ .+..|.+||+.+++.........|...+.+++|+|
T Consensus 190 p--Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 267 (706)
T 2z3z_A 190 P--KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP 267 (706)
T ss_dssp T--TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECT
T ss_pred C--CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEEC
Confidence 4 599999998 44789999998876433222224667899999999
Q ss_pred CCCCcEEEEeecCC-----eEEEEEeecCCCCcceeeec--ccc---cccceeeeCC--CCCCCccccccCCCCCCccce
Q psy2762 123 KEFGLILACGSSDG-----TISFLTYMSDTNSWESRKIA--AHT---IGCNAVSWGP--GIGSLSELDLKGSKLGGVAKR 190 (318)
Q Consensus 123 ~~~~~~lasgs~d~-----~i~i~~~~~~~~~~~~~~~~--~h~---~~v~~~~~~p--~~~~~~~~~~~~~~~~~~~~~ 190 (318)
+ +..+++++.++ .|.+||...+. ....+. .+. ..+..+.|+| + +++
T Consensus 268 d--g~~l~~~~~~~~~~~~~v~~~d~~~g~---~~~~~~~~~~~~~~~~~~~~~~sp~~d-----------------g~~ 325 (706)
T 2z3z_A 268 D--ENILYVAEVNRAQNECKVNAYDAETGR---FVRTLFVETDKHYVEPLHPLTFLPGSN-----------------NQF 325 (706)
T ss_dssp T--SSEEEEEEECTTSCEEEEEEEETTTCC---EEEEEEEEECSSCCCCCSCCEECTTCS-----------------SEE
T ss_pred C--CCEEEEEEeCCCCCeeEEEEEECCCCc---eeeEEEEccCCCeECccCCceeecCCC-----------------CEE
Confidence 9 66777777665 88889864431 122222 121 1246788998 6 468
Q ss_pred EEEecCCCeEEEEEcc-CCeEEEEEEcccCCCCeeE-EEEccCCCCCccEEEEE-eCCC----eEEEEEcCCCcceeeEE
Q psy2762 191 LVSGGCDNLIKIWKQE-GDKWIEETKLENHSDWVRD-VAWAPSWGLSKCMIASC-SQDR----KVIIWTSNDYVTWTPFI 263 (318)
Q Consensus 191 lasgs~d~~i~iwd~~-~~~~~~~~~~~~h~~~V~~-v~~sp~~~~~~~~l~s~-s~D~----~i~vw~~~~~~~~~~~~ 263 (318)
|++++.|+.++||+.+ .+. ....+..|...+.. +.|+|+ +..|+.+ +.++ .|..|+..+.. ...
T Consensus 326 l~~~~~~g~~~l~~~~~~~~--~~~~l~~~~~~v~~~~~~spd----g~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~ 396 (706)
T 2z3z_A 326 IWQSRRDGWNHLYLYDTTGR--LIRQVTKGEWEVTNFAGFDPK----GTRLYFESTEASPLERHFYCIDIKGGK---TKD 396 (706)
T ss_dssp EEEECTTSSCEEEEEETTSC--EEEECCCSSSCEEEEEEECTT----SSEEEEEESSSCTTCBEEEEEETTCCC---CEE
T ss_pred EEEEccCCccEEEEEECCCC--EEEecCCCCeEEEeeeEEcCC----CCEEEEEecCCCCceEEEEEEEcCCCC---cee
Confidence 8999999999999876 333 23456677777877 899997 5555544 4444 56666765532 222
Q ss_pred eeecCCcEEEEEEcCCCCEEEEEeCC----CeEEEEEECCC
Q psy2762 264 MNTFDDVVWNVSWSLTGDILTVSCGD----NSVSLWKENTD 300 (318)
Q Consensus 264 ~~~~~~~v~~v~~spdg~~l~s~~~D----~~v~iW~~~~~ 300 (318)
+ .+...+.+++|||||++|+.++.+ +.+.+|+...+
T Consensus 397 l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 397 L-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp S-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred c-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 3 256679999999999998877544 46999997654
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=1.9e-20 Score=172.72 Aligned_cols=203 Identities=13% Similarity=0.060 Sum_probs=146.4
Q ss_pred cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC-----------CcEEE---EEEecCCCcCeEEEEeeCCCCCcEEE--
Q psy2762 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN-----------GNWFK---YYEYNNHDSSVNSIAWAPKEFGLILA-- 130 (318)
Q Consensus 67 ~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~-----------~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~la-- 130 (318)
..+..+++++ ++.++++++.|+ ++||+... ..... ...+ .+...|.+++|+|+ +.+++
T Consensus 37 ~~~n~lavs~--~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spd--g~~lav~ 110 (434)
T 2oit_A 37 ERSSLLAVSN--KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCD--NLTLSAC 110 (434)
T ss_dssp SCCBCEEEET--TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTT--SCEEEEE
T ss_pred CCccEEEEec--CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCC--CCEEEEE
Confidence 3467788874 478899999888 88886421 01100 0111 35678999999998 56777
Q ss_pred --EeecCCeEEEEEeecC--------CCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeE
Q psy2762 131 --CGSSDGTISFLTYMSD--------TNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLI 200 (318)
Q Consensus 131 --sgs~d~~i~i~~~~~~--------~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i 200 (318)
+++.|+.|++||+... ........+.+|...|.+++|+|+. +.+||+++.|++|
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~----------------~~~las~s~Dg~v 174 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV----------------PSMVAVCLADGSI 174 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC----------------TTEEEEEETTSCE
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC----------------CCEEEEEECCCeE
Confidence 7889999999997543 1001123345799999999999963 3689999999999
Q ss_pred EEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec-------CCcEEE
Q psy2762 201 KIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-------DDVVWN 273 (318)
Q Consensus 201 ~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~-------~~~v~~ 273 (318)
+|||++++.. .....+|...|++++|+|+ |.+|++++.|++|++||.+... ...+..+ ...|.+
T Consensus 175 ~iwD~~~~~~--~~~~~~~~~~v~~v~wspd----g~~lasgs~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 175 AVLQVTETVK--VCATLPSTVAVTSVCWSPK----GKQLAVGKQNGTVVQYLPTLQE---KKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp EEEEESSSEE--EEEEECGGGCEEEEEECTT----SSCEEEEETTSCEEEECTTCCE---EEEECCCTTCCTTSCEEEEE
T ss_pred EEEEcCCCcc--eeeccCCCCceeEEEEcCC----CCEEEEEcCCCcEEEEccCCcc---cccccCCcccCCCCceeEEE
Confidence 9999987743 3344678899999999996 8899999999999999987321 1122222 237999
Q ss_pred EEEcCCCCEEEEEe-CCC------eEEEEEECCC
Q psy2762 274 VSWSLTGDILTVSC-GDN------SVSLWKENTD 300 (318)
Q Consensus 274 v~~spdg~~l~s~~-~D~------~v~iW~~~~~ 300 (318)
++|++++.++++.+ .|| .+++|++...
T Consensus 246 v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99999998876543 443 3899998753
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=8.5e-20 Score=178.67 Aligned_cols=241 Identities=10% Similarity=0.064 Sum_probs=169.3
Q ss_pred ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762 14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
..|.+++|+|||++|++++. ++|.+||+.... ...+..+..|...+.+++|++ +|++||+++ ++.|.
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~---------~~~~~~l~~~~~~~~~~~~SP--DG~~la~~~-~~~i~ 175 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEG---------KAAVRQLTHGEGFATDAKLSP--KGGFVSFIR-GRNLW 175 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCS---------TTSCCBCCCSSSCEEEEEECT--TSSEEEEEE-TTEEE
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCC---------cceEEEcccCCcccccccCCC--CCCEEEEEe-CCcEE
Confidence 34889999999999999886 999999986320 002345667888999999974 599999987 56999
Q ss_pred EEeCCCCcEEEEEEecCCCcC----------------eEEEEeeCCCCCcEEEEeecCC---------------------
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSS----------------VNSIAWAPKEFGLILACGSSDG--------------------- 136 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~----------------v~~v~~~p~~~~~~lasgs~d~--------------------- 136 (318)
+||+.++....+ ...+... +.+++|+|+ +..|++++.|+
T Consensus 176 ~~d~~~g~~~~~--~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD--g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 176 VIDLASGRQMQL--TADGSTTIGNGIAEFVADEEMDRHTGYWWAPD--DSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp EEETTTTEEEEC--CCCCCSSEEESCCCHHHHHHSCCCCSEEECTT--SSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred EEecCCCCEEEe--ccCCccceeccccceeeeeccccccceEECCC--CCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 999987753322 2222222 478999999 66777776665
Q ss_pred ------------eEEEEEeec-CCCCcceeeec---ccccccceeeeCCCCCCCccccccCCCCCCccceEEEec-----
Q psy2762 137 ------------TISFLTYMS-DTNSWESRKIA---AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG----- 195 (318)
Q Consensus 137 ------------~i~i~~~~~-~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs----- 195 (318)
.|.+||... +. ...+. .|...+..++| |+ +++|+.++
T Consensus 252 ~~~~~g~~~~~~~l~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~-pD-----------------g~~l~~~~~~~~~ 309 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISPAEQAQ----TQWIDLGKEQDIYLARVNW-RD-----------------PQHLSFQRQSRDQ 309 (741)
T ss_dssp ECCBTTSCCCEEEEEEECSSTTCC----CEEECCCSCSSEEEEEEEE-EE-----------------TTEEEEEEEETTS
T ss_pred ecCCCCCCCCeeEEEEEECCCCCc----eEEecCCCCcceEEEEEEe-CC-----------------CCEEEEEEecccC
Confidence 666776643 32 12222 46667888999 97 46677554
Q ss_pred CCCeEEEEEccCCeEEEEEEcccCC-C---CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762 196 CDNLIKIWKQEGDKWIEETKLENHS-D---WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV 271 (318)
Q Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~h~-~---~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v 271 (318)
.+..|++||+.+++..... ..+. . .+..+.|+|+ |+++++++.|+.++||....... ...+..+...|
T Consensus 310 ~~~~i~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~~spd----g~~~~~~~~~g~~~l~~~~~~~~--~~~l~~~~~~v 381 (741)
T 2ecf_A 310 KKLDLVEVTLASNQQRVLA--HETSPTWVPLHNSLRFLDD----GSILWSSERTGFQHLYRIDSKGK--AAALTHGNWSV 381 (741)
T ss_dssp SEEEEEEEETTTCCEEEEE--EEECSSCCCCCSCCEECTT----SCEEEEECTTSSCEEEEECSSSC--EEESCCSSSCE
T ss_pred CeEEEEEEECCCCceEEEE--EcCCCCcCCcCCceEECCC----CeEEEEecCCCccEEEEEcCCCC--eeeeeecceEE
Confidence 3568999999887654332 2332 2 3568999996 67899999999888887653221 34455666778
Q ss_pred EEE-EEcCCCCEEEEEe-CCC--eEEEEEECCCC
Q psy2762 272 WNV-SWSLTGDILTVSC-GDN--SVSLWKENTDG 301 (318)
Q Consensus 272 ~~v-~~spdg~~l~s~~-~D~--~v~iW~~~~~~ 301 (318)
.++ .|+|||+.|+.++ .|+ +++||+++..|
T Consensus 382 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g 415 (741)
T 2ecf_A 382 DELLAVDEKAGLAYFRAGIESARESQIYAVPLQG 415 (741)
T ss_dssp EEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC
T ss_pred EeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC
Confidence 887 5999999876554 455 89999988644
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=1.2e-19 Score=177.07 Aligned_cols=253 Identities=9% Similarity=0.087 Sum_probs=164.9
Q ss_pred ecCCCcc---eeeeeeecCCCCEEEEeeCC---------CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEec
Q psy2762 8 VDTGHED---MIHDAEMDYLGLYLATCSSD---------HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWA 75 (318)
Q Consensus 8 ~~~gH~~---~v~~~~~~~~g~~l~s~s~D---------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~ 75 (318)
+..+|.. .|.+++|||||++|++++.+ +.+.+||++.. ....+....+|...+..++|+
T Consensus 52 ~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~---------~~~~l~~~~~~~~~~~~~~~S 122 (723)
T 1xfd_A 52 LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG---------DPQSLDPPEVSNAKLQYAGWG 122 (723)
T ss_dssp EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC---------CCEECCCTTCCSCCCSBCCBC
T ss_pred EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC---------ceEeccCCccccccccccEEC
Confidence 4455654 49999999999999999875 77889998732 112233334566668899997
Q ss_pred CCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcC------------------eEEEEeeCCCCCcEEEEeecCC-
Q psy2762 76 HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS------------------VNSIAWAPKEFGLILACGSSDG- 136 (318)
Q Consensus 76 ~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~------------------v~~v~~~p~~~~~~lasgs~d~- 136 (318)
+ +|++||+++. +.|.+||+.+++...+. ..+... +.+++|+|| +..|++++.|+
T Consensus 123 P--dG~~la~~~~-~~i~~~~~~~g~~~~~~--~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD--g~~la~~~~~~~ 195 (723)
T 1xfd_A 123 P--KGQQLIFIFE-NNIYYCAHVGKQAIRVV--STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD--GTRLAYAAINDS 195 (723)
T ss_dssp S--STTCEEEEET-TEEEEESSSSSCCEEEE--CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT--SSEEEEEEEECT
T ss_pred C--CCCEEEEEEC-CeEEEEECCCCceEEEe--cCCCCCceECcccceeEEEEeccCcceEEECCC--CCEEEEEEECCC
Confidence 4 5999999886 89999999877644432 222322 378999999 66777776543
Q ss_pred ---------------------------------eEEEEEeecCCCCcceeeecc------cccccceeeeCCCCCCCccc
Q psy2762 137 ---------------------------------TISFLTYMSDTNSWESRKIAA------HTIGCNAVSWGPGIGSLSEL 177 (318)
Q Consensus 137 ---------------------------------~i~i~~~~~~~~~~~~~~~~~------h~~~v~~~~~~p~~~~~~~~ 177 (318)
.|.+||...... ...+.. +...+..++|+|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~---~~~l~~~~~~~~~~~~~~~~~~SpD------- 265 (723)
T 1xfd_A 196 RVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH---DLEMMPPDDPRMREYYITMVKWATS------- 265 (723)
T ss_dssp TSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC---CEECCCCCCGGGSSEEEEEEEESSS-------
T ss_pred ccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce---eEEeeCCccCCCccceeEEEEEeCC-------
Confidence 677887644321 122332 2456778999997
Q ss_pred cccCCCCCCccceEEEec----CCCeEEEEEccCCeEEEEEEcccCCCCee----EEEEccCCCCCccEEEE--EeCCC-
Q psy2762 178 DLKGSKLGGVAKRLVSGG----CDNLIKIWKQEGDKWIEETKLENHSDWVR----DVAWAPSWGLSKCMIAS--CSQDR- 246 (318)
Q Consensus 178 ~~~~~~~~~~~~~lasgs----~d~~i~iwd~~~~~~~~~~~~~~h~~~V~----~v~~sp~~~~~~~~l~s--~s~D~- 246 (318)
+++|++.+ .+..|++||+.+++...... ..+..++. .+.|+|+ |+.|+. ...|+
T Consensus 266 ----------g~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~spd----g~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 266 ----------TKVAVTWLNRAQNVSILTLCDATTGVCTKKHE-DESEAWLHRQNEEPVFSKD----GRKFFFIRAIPQGG 330 (723)
T ss_dssp ----------SEEEEEEEETTSCEEEEEEEETTTCCEEEEEE-EECSSCCCCCCCCCEECTT----SCSEEEEEEECCSS
T ss_pred ----------CeEEEEEEcCCCCeEEEEEEeCCCCcceEEEE-eccCCEEeccCCCceEcCC----CCeEEEEEecccCC
Confidence 45665554 33579999998876543322 23444443 7899997 665554 55677
Q ss_pred -----eEEEEE-cCCCcceeeEEeeecCCcEEE-EEEcCCCCEEEEEeCC---CeEEEEEECCCC
Q psy2762 247 -----KVIIWT-SNDYVTWTPFIMNTFDDVVWN-VSWSLTGDILTVSCGD---NSVSLWKENTDG 301 (318)
Q Consensus 247 -----~i~vw~-~~~~~~~~~~~~~~~~~~v~~-v~~spdg~~l~s~~~D---~~v~iW~~~~~~ 301 (318)
.|.+|+ ..+........+......+.. ++|+|||+.|+.++.+ +.++||+++..+
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCC
Confidence 466666 333220001222222233444 7999999999876655 789999998754
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=3.3e-18 Score=151.89 Aligned_cols=245 Identities=9% Similarity=0.032 Sum_probs=166.5
Q ss_pred cceeeeeeecCCCCEEEEeeC-------CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc-EEE
Q psy2762 13 EDMIHDAEMDYLGLYLATCSS-------DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT-LLA 84 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~-------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~-~la 84 (318)
...+..++|+|+|++|+.++. ++.|.+||.. +++.+..+.. ...+..++|++ +++ +++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~-----------~~~~~~~~~~-~~~~~~~~~s~--dg~~l~v 105 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPV-----------TLEVTQAIHN-DLKPFGATINN--TTQTLWF 105 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTT-----------TCCEEEEEEE-SSCCCSEEEET--TTTEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCC-----------CCeEEEEEec-CCCcceEEECC--CCCEEEE
Confidence 346788999999999888774 5689999986 2455555553 34467888874 466 455
Q ss_pred EEECCCeEEEEeCCCCcEEEEEEecCCC-------cCeEEEEeeCCCCCcEEEEe-ecCCeEEEEEeecCCCCcceeeec
Q psy2762 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHD-------SSVNSIAWAPKEFGLILACG-SSDGTISFLTYMSDTNSWESRKIA 156 (318)
Q Consensus 85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~-------~~v~~v~~~p~~~~~~lasg-s~d~~i~i~~~~~~~~~~~~~~~~ 156 (318)
+...++.|.+||+.+++........... ..+.+++|+|++ ..++++. ..++.|.+||..... ....+.
T Consensus 106 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~~~---~~~~~~ 181 (353)
T 3vgz_A 106 GNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGNIK---LKTAIQ 181 (353)
T ss_dssp EETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTTTE---EEEEEC
T ss_pred EecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCCCc---eEEEec
Confidence 5566899999999888754544332111 126889999984 2334343 357889999864322 122233
Q ss_pred ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc--ccCCCCeeEEEEccCCCC
Q psy2762 157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL--ENHSDWVRDVAWAPSWGL 234 (318)
Q Consensus 157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~--~~h~~~V~~v~~sp~~~~ 234 (318)
.+...+..++|+|+ +.+|++++.++.|.+||..+++....... .++...+.+++|+|+
T Consensus 182 ~~~~~~~~~~~s~d-----------------g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d--- 241 (353)
T 3vgz_A 182 NTGKMSTGLALDSE-----------------GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA--- 241 (353)
T ss_dssp CCCTTCCCCEEETT-----------------TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT---
T ss_pred CCCCccceEEECCC-----------------CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC---
Confidence 34445678889987 46788888899999999988865443332 235566889999997
Q ss_pred CccEEEEE-eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCC
Q psy2762 235 SKCMIASC-SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTD 300 (318)
Q Consensus 235 ~~~~l~s~-s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~ 300 (318)
+.+|+.+ ..++.|.+||..+... ..... ...+ ..++|+|||++|+.++ .++.|.+||...+
T Consensus 242 -g~~l~~~~~~~~~v~~~d~~~~~~--~~~~~-~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 242 -RQRAFITDSKAAEVLVVDTRNGNI--LAKVA-APES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp -TTEEEEEESSSSEEEEEETTTCCE--EEEEE-CSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred -CCEEEEEeCCCCEEEEEECCCCcE--EEEEE-cCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 5544444 4569999999976542 12222 1222 5799999999766665 6899999997664
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=2.6e-18 Score=152.96 Aligned_cols=244 Identities=13% Similarity=0.123 Sum_probs=158.3
Q ss_pred eCCCcEEEEEcCCCcCCCCCCCCcceEEE-EecccccCeEEEEecCCCCCcEEEEEEC---CCeEEEEeCCCCcEEEEEE
Q psy2762 32 SSDHTVKVFNLDRNLKKDDSHSQKGTLIA-ELKGHSGPVWQVAWAHPQFGTLLASCSY---DRKVIIWRGDNGNWFKYYE 107 (318)
Q Consensus 32 s~D~~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~V~~v~~~~~~~~~~las~s~---Dg~v~vWd~~~~~~~~~~~ 107 (318)
+.++.|.+|+++.. ++++.. ....+...+..++|++ +|+ |++++. ++.|.+|++.++.......
T Consensus 13 ~~~~~i~v~~~d~~---------tg~~~~~~~~~~~~~p~~~a~sp--dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 13 KTSQGIYQGTLDTT---------AKTLTNDGLLAATQNPTYLALSA--KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp SSCCEEEEEEEETT---------TTEEEEEEEEEECSCCCCEEECT--TCE-EEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred CCCCCEEEEEEcCC---------CCeEEEeeeeeccCCcceEEEcc--CCe-EEEEEecCCCceEEEEEecCCcEEEeee
Confidence 34678999988621 344322 3345567778899974 477 555544 6899999997766444444
Q ss_pred ecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecc---------cccccceeeeCCCCCCCccc
Q psy2762 108 YNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAA---------HTIGCNAVSWGPGIGSLSEL 177 (318)
Q Consensus 108 ~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~---------h~~~v~~~~~~p~~~~~~~~ 177 (318)
+..+...+..++|+|+ +.++++++ .++.|.+|++...........+.. +...+..++|+|+
T Consensus 81 ~~~~~~~p~~~a~spd--g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd------- 151 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEA--RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD------- 151 (347)
T ss_dssp EEEESCCCSEEEEETT--TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-------
T ss_pred eecCCCCCEEEEECCC--CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC-------
Confidence 4456677899999998 55566655 789999999853221111111111 1113567899997
Q ss_pred cccCCCCCCccceEEEecCCCeEEEEEcc-CCeEEEEEEcccC-CCCeeEEEEccCCCCCccE-EEEEeCCCeEEEEEcC
Q psy2762 178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQE-GDKWIEETKLENH-SDWVRDVAWAPSWGLSKCM-IASCSQDRKVIIWTSN 254 (318)
Q Consensus 178 ~~~~~~~~~~~~~lasgs~d~~i~iwd~~-~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~~~-l~s~s~D~~i~vw~~~ 254 (318)
++.+++...++.|++|++. +++......+..+ ...+..++|+|+ |++ +++...++.|++|++.
T Consensus 152 ----------g~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spd----g~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 152 ----------NRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPD----GQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp ----------SCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTT----SSEEEEEETTTTEEEEEEEE
T ss_pred ----------CcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCC----CCEEEEEeCCCCEEEEEEec
Confidence 3567777888999999987 4544333332222 235788999997 664 4555678999999986
Q ss_pred CCc-ce-eeEEeeecC------CcEEEEEEcCCCCEE-EEEeCCCeEEEEEECCCCceEEEeeec
Q psy2762 255 DYV-TW-TPFIMNTFD------DVVWNVSWSLTGDIL-TVSCGDNSVSLWKENTDGAWQCITEMG 310 (318)
Q Consensus 255 ~~~-~~-~~~~~~~~~------~~v~~v~~spdg~~l-~s~~~D~~v~iW~~~~~~~~~~~~~~~ 310 (318)
... .. ......... ..+..++|+|||++| ++...++.|++|+++..|.+..+..+.
T Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~ 282 (347)
T 3hfq_A 218 TQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS 282 (347)
T ss_dssp TTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE
T ss_pred CCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe
Confidence 421 11 111122221 358899999999987 455568999999998766666665543
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=1.9e-19 Score=182.96 Aligned_cols=236 Identities=11% Similarity=0.027 Sum_probs=182.1
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-----------cccCeEEEEec-CC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-----------HSGPVWQVAWA-HP 77 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----------h~~~V~~v~~~-~~ 77 (318)
.+|. .+...+|+|+|++|+.+. |+.|.+||+.. .. +..+.+ |.+.|.+++|+ +
T Consensus 242 ~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~-----------~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p- 306 (1045)
T 1k32_A 242 TSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDT-----------EK-IEKIEIGDLESPEDRIISIPSKFAEDFSPL- 306 (1045)
T ss_dssp CCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTT-----------CC-EEECCCCCCCBCCSEEEECGGGGEEEEEEC-
T ss_pred cCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCc-----------eE-eeeeccCcccccccccccccccceeeecCC-
Confidence 3444 466779999999999874 89999999841 11 224443 56679999997 5
Q ss_pred CCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc-CeEEEEeeCCCCCcEEEEeecCCeEE-EEEeecCCCCcceeee
Q psy2762 78 QFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS-SVNSIAWAPKEFGLILACGSSDGTIS-FLTYMSDTNSWESRKI 155 (318)
Q Consensus 78 ~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~~lasgs~d~~i~-i~~~~~~~~~~~~~~~ 155 (318)
+|++|++++ ++.|.+|+...+... .+..|.. .+..++|+ + +..++.++.+..+. +|+.... ....+
T Consensus 307 -dG~~la~~~-~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~s-d--g~~l~~~s~~~~l~~~~d~~~~----~~~~l 374 (1045)
T 1k32_A 307 -DGDLIAFVS-RGQAFIQDVSGTYVL---KVPEPLRIRYVRRGGD-T--KVAFIHGTREGDFLGIYDYRTG----KAEKF 374 (1045)
T ss_dssp -GGGCEEEEE-TTEEEEECTTSSBEE---ECSCCSCEEEEEECSS-S--EEEEEEEETTEEEEEEEETTTC----CEEEC
T ss_pred -CCCEEEEEE-cCEEEEEcCCCCceE---EccCCCcceEEeeeEc-C--CCeEEEEECCCceEEEEECCCC----CceEe
Confidence 489999988 889999998876532 3556777 89999999 7 67788888777776 7775322 23344
Q ss_pred cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCC
Q psy2762 156 AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS 235 (318)
Q Consensus 156 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~ 235 (318)
.+|...+..++|+|+ +++||+++.++.|++||+.+++... .+.+|...+.+++|||+
T Consensus 375 ~~~~~~~~~~~~SpD-----------------G~~la~~~~~~~v~~~d~~tg~~~~--~~~~~~~~v~~~~~SpD---- 431 (1045)
T 1k32_A 375 EENLGNVFAMGVDRN-----------------GKFAVVANDRFEIMTVDLETGKPTV--IERSREAMITDFTISDN---- 431 (1045)
T ss_dssp CCCCCSEEEEEECTT-----------------SSEEEEEETTSEEEEEETTTCCEEE--EEECSSSCCCCEEECTT----
T ss_pred cCCccceeeeEECCC-----------------CCEEEEECCCCeEEEEECCCCceEE--eccCCCCCccceEECCC----
Confidence 467778889999997 5789999999999999998876433 34578888999999996
Q ss_pred ccEEEEEeCCC----------eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762 236 KCMIASCSQDR----------KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 236 ~~~l~s~s~D~----------~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~ 298 (318)
|++|++++.++ .|++||+.+.. ...+..+...+.+++|+|||++|+.++.++..++|+..
T Consensus 432 G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 432 SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred CCeEEEEecCccccccCCCCCeEEEEECCCCc---EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 88888887754 89999998643 34555677788999999999999999998888888743
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=1.9e-19 Score=175.34 Aligned_cols=241 Identities=12% Similarity=0.097 Sum_probs=162.9
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEE-EEecccc-----------------cCeEEEEecC
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHS-----------------GPVWQVAWAH 76 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~-----------------~~V~~v~~~~ 76 (318)
.+..+.|. |..+++++.|+ | +||+.++ +.+ ..+..|. ..|.+++|++
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg-----------~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~sp 91 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANG-----------KSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAG 91 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-E-EEEC------------------CEEEEHHHHHTTC-----------CCCEEEEETT
T ss_pred cCCCCcCc--CCeEEEEeCCc-E-EEECCCC-----------cEeeEEeechhHhhhhccchhccccccccCceeEEECC
Confidence 35567777 67777788888 8 9998632 221 2333333 5699999974
Q ss_pred CCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec-----CCCCcc
Q psy2762 77 PQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS-----DTNSWE 151 (318)
Q Consensus 77 ~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~-----~~~~~~ 151 (318)
++.++++ .|++|.+||+.+++... +..+...+.+++|+|+ +..+++ ..|+.|.+|+... +.
T Consensus 92 --d~~~~~~--~~~~i~~~d~~~~~~~~---l~~~~~~~~~~~~Spd--G~~la~-~~~~~i~v~~~~~~~~~~g~---- 157 (706)
T 2z3z_A 92 --RGLVVLF--TQGGLVGFDMLARKVTY---LFDTNEETASLDFSPV--GDRVAY-VRNHNLYIARGGKLGEGMSR---- 157 (706)
T ss_dssp --TTEEEEE--ETTEEEEEETTTTEEEE---EECCTTCCTTCEECTT--SSEEEE-EETTEEEEEECBCTTSCCCC----
T ss_pred --CCeEEEE--ECCEEEEEECCCCceEE---ccCCcccccCCcCCCC--CCEEEE-EECCeEEEEecCcccccCCC----
Confidence 3444444 46999999998875333 3346677889999999 667777 4689999999865 32
Q ss_pred eeeec-ccccc--------------cceeeeCCCCCCCccccccCCCCCCccceEEEec---------------------
Q psy2762 152 SRKIA-AHTIG--------------CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG--------------------- 195 (318)
Q Consensus 152 ~~~~~-~h~~~--------------v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs--------------------- 195 (318)
...+. .+... +..+.|+|+ +++|++++
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD-----------------g~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK-----------------GSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTT-----------------SSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCC-----------------CCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 11221 22221 478899997 46777776
Q ss_pred ------------CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC-----eEEEEEcCCCcc
Q psy2762 196 ------------CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR-----KVIIWTSNDYVT 258 (318)
Q Consensus 196 ------------~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~-----~i~vw~~~~~~~ 258 (318)
.+..|++||+.+++.........|...+.+++|+|+ |+.|++++.|+ .|++||+.+...
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd----g~~l~~~~~~~~~~~~~v~~~d~~~g~~ 296 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD----ENILYVAEVNRAQNECKVNAYDAETGRF 296 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT----SSEEEEEEECTTSCEEEEEEEETTTCCE
T ss_pred EEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC----CCEEEEEEeCCCCCeeEEEEEECCCCce
Confidence 456799999988865333222357778999999996 88899888876 899999987521
Q ss_pred eeeEEeeecCC---cEEEEEEcC--CCCEEEEEeCCCeEEEEEECC-CCceEE
Q psy2762 259 WTPFIMNTFDD---VVWNVSWSL--TGDILTVSCGDNSVSLWKENT-DGAWQC 305 (318)
Q Consensus 259 ~~~~~~~~~~~---~v~~v~~sp--dg~~l~s~~~D~~v~iW~~~~-~~~~~~ 305 (318)
........... .+.+++|+| ||++|+++..|+.++||..+. ++....
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~ 349 (706)
T 2z3z_A 297 VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQ 349 (706)
T ss_dssp EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEE
T ss_pred eeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEe
Confidence 11111112222 346789999 999999999999999999874 433433
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=1.4e-19 Score=183.84 Aligned_cols=239 Identities=8% Similarity=0.019 Sum_probs=180.3
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
.+|...+.++.|+++ .++++++.|++++||.++.. +.....+..|. .+...+|++ +|++|+++ .+
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~----------g~~~~~l~~~~-~~~~~~~Sp--DG~~la~~-~~ 264 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLD----------GKDLRKHTSFT-DYYPRHLNT--DGRRILFS-KG 264 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETT----------SCSCEECCCCC-SSCEEEEEE--SSSCEEEE-ET
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCC----------CCcceEecCCC-CcceeeEcC--CCCEEEEE-eC
Confidence 689999999999998 67778888999999987521 22234555565 356678874 58888887 48
Q ss_pred CeEEEEeCCCCcEEEEEEecC-----------CCcCeEEEEee-CCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNN-----------HDSSVNSIAWA-PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA 157 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~-----------h~~~v~~v~~~-p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~ 157 (318)
+.|.+|++..... . .+.. |...+.+++|+ |+ +..+++++ ++.|.+|+.... ....+..
T Consensus 265 ~~i~~~d~~~~~l-~--~l~~~~~~~~~~~~~~~~~v~~~~~S~pd--G~~la~~~-~~~i~~~~~~~~----~~~~~~~ 334 (1045)
T 1k32_A 265 GSIYIFNPDTEKI-E--KIEIGDLESPEDRIISIPSKFAEDFSPLD--GDLIAFVS-RGQAFIQDVSGT----YVLKVPE 334 (1045)
T ss_dssp TEEEEECTTTCCE-E--ECCCCCCCBCCSEEEECGGGGEEEEEECG--GGCEEEEE-TTEEEEECTTSS----BEEECSC
T ss_pred CEEEEecCCceEe-e--eeccCcccccccccccccccceeeecCCC--CCEEEEEE-cCEEEEEcCCCC----ceEEccC
Confidence 9999999854432 2 3333 33468999999 98 66777776 788888875322 2334556
Q ss_pred ccc-ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEE-EEEccCCeEEEEEEcccCCCCeeEEEEccCCCCC
Q psy2762 158 HTI-GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIK-IWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS 235 (318)
Q Consensus 158 h~~-~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~-iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~ 235 (318)
|.. .+..++|+ + ++.|+.++.++.+. +|+..+++.. .+.+|...+..++|+|+
T Consensus 335 ~~~~~~~~~~~s-d-----------------g~~l~~~s~~~~l~~~~d~~~~~~~---~l~~~~~~~~~~~~SpD---- 389 (1045)
T 1k32_A 335 PLRIRYVRRGGD-T-----------------KVAFIHGTREGDFLGIYDYRTGKAE---KFEENLGNVFAMGVDRN---- 389 (1045)
T ss_dssp CSCEEEEEECSS-S-----------------EEEEEEEETTEEEEEEEETTTCCEE---ECCCCCCSEEEEEECTT----
T ss_pred CCcceEEeeeEc-C-----------------CCeEEEEECCCceEEEEECCCCCce---EecCCccceeeeEECCC----
Confidence 666 77888888 6 56788888888888 9998876532 34478888999999996
Q ss_pred ccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC----------eEEEEEECCC
Q psy2762 236 KCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN----------SVSLWKENTD 300 (318)
Q Consensus 236 ~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~----------~v~iW~~~~~ 300 (318)
|.+|++++.|+.|++||+.+... ......+...|.+++|||||++|++++.++ .|++||+..+
T Consensus 390 G~~la~~~~~~~v~~~d~~tg~~--~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 390 GKFAVVANDRFEIMTVDLETGKP--TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp SSEEEEEETTSEEEEEETTTCCE--EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred CCEEEEECCCCeEEEEECCCCce--EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 88999999999999999987542 233446778899999999999999887654 9999997653
No 153
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=5.1e-18 Score=149.67 Aligned_cols=247 Identities=9% Similarity=0.061 Sum_probs=160.4
Q ss_pred eeecCCCCE-EEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC-CCeEEEEe
Q psy2762 19 AEMDYLGLY-LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY-DRKVIIWR 96 (318)
Q Consensus 19 ~~~~~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~-Dg~v~vWd 96 (318)
+.|.+++++ +++++.+++|++||++ +++.+..+..+...+ .++|++ ++++|+.++. ++.|.+||
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~-----------~~~~~~~~~~~~~~~-~~~~s~--dg~~l~~~~~~~~~i~~~d 68 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTD-----------TLEILNQITLGYDFV-DTAITS--DCSNVVVTSDFCQTLVQIE 68 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETT-----------TCCEEEEEECCCCEE-EEEECS--SSCEEEEEESTTCEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCc-----------ccceeeeEEccCCcc-eEEEcC--CCCEEEEEeCCCCeEEEEE
Confidence 346665555 7788899999999986 345666666666667 999974 4776666655 89999999
Q ss_pred CCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC---eEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762 97 GDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG---TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS 173 (318)
Q Consensus 97 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~---~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 173 (318)
+.+++.. ...+..+..+..+++|+|+ +.+++++..++ .|.+||..... ....+ .+......++|+|+.
T Consensus 69 ~~~~~~~-~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~i~v~d~~~~~---~~~~~-~~~~~~~~~~~spdg-- 139 (331)
T 3u4y_A 69 TQLEPPK-VVAIQEGQSSMADVDITPD--DQFAVTVTGLNHPFNMQSYSFLKNK---FISTI-PIPYDAVGIAISPNG-- 139 (331)
T ss_dssp CSSSSCE-EEEEEECSSCCCCEEECTT--SSEEEECCCSSSSCEEEEEETTTTE---EEEEE-ECCTTEEEEEECTTS--
T ss_pred CCCCcee-EEecccCCCCccceEECCC--CCEEEEecCCCCcccEEEEECCCCC---eEEEE-ECCCCccceEECCCC--
Confidence 9887641 2234445556655999998 56666555553 89999874332 12222 223345789999973
Q ss_pred CccccccCCCCCCccceEEEecCCCe-EEEEEccCCeEE-EE-EEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEE
Q psy2762 174 LSELDLKGSKLGGVAKRLVSGGCDNL-IKIWKQEGDKWI-EE-TKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVI 249 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~lasgs~d~~-i~iwd~~~~~~~-~~-~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~ 249 (318)
...+++...++. |++|++...... .. .........+..+.|+|+ ++ +++++..++.|+
T Consensus 140 --------------~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spd----g~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 140 --------------NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPD----GNFAFVANLIGNSIG 201 (331)
T ss_dssp --------------SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTT----SSEEEEEETTTTEEE
T ss_pred --------------CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCC----CCEEEEEeCCCCeEE
Confidence 124555566678 999997643211 11 111133445799999997 65 455566799999
Q ss_pred EEEcCCCccee-eEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCceEEEee
Q psy2762 250 IWTSNDYVTWT-PFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCITE 308 (318)
Q Consensus 250 vw~~~~~~~~~-~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~~~~~~~ 308 (318)
+|++....... ...+. ....+..++|+|||++|+.++ .++.|.+||... ++...+..
T Consensus 202 v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~-~~~~~~~~ 260 (331)
T 3u4y_A 202 ILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS-GTLSFVKS 260 (331)
T ss_dssp EEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT-TEEEEEEE
T ss_pred EEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC-Cceeeecc
Confidence 99987654211 22222 345678999999999776665 578999999765 45444443
No 154
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=5e-18 Score=152.67 Aligned_cols=250 Identities=10% Similarity=0.070 Sum_probs=161.4
Q ss_pred CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc--cCeEEEEecCCCCCc--EEEEEE
Q psy2762 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS--GPVWQVAWAHPQFGT--LLASCS 87 (318)
Q Consensus 12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~~~~~~~~~--~las~s 87 (318)
+...+..++|+|+|++|++++.+ +|.+|+++. .+++..... |. +.+.+++|++ +|+ ++++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~----------~g~~~~~~~-~~~~g~~~~~~~sp--dg~~l~~~~~~ 103 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKS----------PTEIVHEAS-HPIGGHPRANDADT--NTRAIFLLAAK 103 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEE----------TTEEEEEEE-EECCSSGGGGCTTS--CCEEEEEEECS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECC----------CCCEEEeeE-eecCCCCccEEECC--CCCEEEEEEec
Confidence 34467889999999999999988 999999851 133332222 21 3355678864 577 355653
Q ss_pred -------------CCCeEEEEeCCC-CcEEEEEE-ec-CCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEee-cCCCC
Q psy2762 88 -------------YDRKVIIWRGDN-GNWFKYYE-YN-NHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYM-SDTNS 149 (318)
Q Consensus 88 -------------~Dg~v~vWd~~~-~~~~~~~~-~~-~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~-~~~~~ 149 (318)
.++++.+|++.. +....... +. .+...+.+++|+|+ +.+++++. .++.|.+|++. .+.
T Consensus 104 ~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd--G~~l~~~~~~~~~v~~~~~~~~g~-- 179 (365)
T 1jof_A 104 QPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT--ETYLYSADLTANKLWTHRKLASGE-- 179 (365)
T ss_dssp STTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSC--
T ss_pred CCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC--CCEEEEEcCCCCEEEEEEECCCCC--
Confidence 699999999863 44332222 11 24567899999999 55555544 46799999985 222
Q ss_pred cc-eeeec--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC-CCeEEEEEcc--CCeEEE----EEEcc--
Q psy2762 150 WE-SRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DNLIKIWKQE--GDKWIE----ETKLE-- 217 (318)
Q Consensus 150 ~~-~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~~i~iwd~~--~~~~~~----~~~~~-- 217 (318)
.. ...+. .|...+..++|+|+ +++|+++++ ++.|++|+.+ ++++.. ...+.
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spd-----------------g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPT-----------------GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTT-----------------SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred EEEeeeEecCCCCCCCCEeEECCC-----------------CCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC
Confidence 11 11222 23456778899997 456666654 7899999865 444321 12222
Q ss_pred --cCCC------CeeEEE-EccCCCCCccEEEEEeCCC------eEEEEEcCCCcceee-E-EeeecCCcEEEEEEcC--
Q psy2762 218 --NHSD------WVRDVA-WAPSWGLSKCMIASCSQDR------KVIIWTSNDYVTWTP-F-IMNTFDDVVWNVSWSL-- 278 (318)
Q Consensus 218 --~h~~------~V~~v~-~sp~~~~~~~~l~s~s~D~------~i~vw~~~~~~~~~~-~-~~~~~~~~v~~v~~sp-- 278 (318)
+|.. .+..++ |+|+ |++|+++..+. +|++|++........ . ....+...+..++|+|
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~spd----G~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~ 318 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTFS----GKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP 318 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTT----SSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred cCCcccccccccccccEEEECCC----CCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCC
Confidence 2332 588999 9996 77776665432 899999863211111 1 1222344566899999
Q ss_pred -CCCEEEEEeCC-CeEEEEEECCC
Q psy2762 279 -TGDILTVSCGD-NSVSLWKENTD 300 (318)
Q Consensus 279 -dg~~l~s~~~D-~~v~iW~~~~~ 300 (318)
||++|++++.+ ++|++|+++..
T Consensus 319 ~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 319 WSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TCTTEEEEECSSSCEEEEEEEETT
T ss_pred cCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999999874 89999998775
No 155
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=2.5e-17 Score=146.16 Aligned_cols=229 Identities=11% Similarity=0.079 Sum_probs=157.4
Q ss_pred ceeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC---------eEEEEecCCCCCcEE
Q psy2762 14 DMIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP---------VWQVAWAHPQFGTLL 83 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~---------V~~v~~~~~~~~~~l 83 (318)
..+..++|+|+|+++ +++..++.|.+||.. +++.+..+..+... +.++.|++ +++++
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l 155 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAK-----------TGEVKGRLVLDDRKRTEEVRPLQPRELVADD--ATNTV 155 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETT-----------TCCEEEEEESCCCCCCSSCCCCEEEEEEEET--TTTEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCC-----------CCeeEEEEecCCCccccccCCCCCceEEECC--CCCEE
Confidence 347789999999955 455668999999986 34556666654432 68899974 47767
Q ss_pred EEEE--CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec----c
Q psy2762 84 ASCS--YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA----A 157 (318)
Q Consensus 84 as~s--~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~----~ 157 (318)
+.++ .++.|.+||..+++... .+..+...+.+++|+|+ +..+++++.++.|.+||..... ....+. +
T Consensus 156 ~~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~ 228 (353)
T 3vgz_A 156 YISGIGKESVIWVVDGGNIKLKT--AIQNTGKMSTGLALDSE--GKRLYTTNADGELITIDTADNK---ILSRKKLLDDG 228 (353)
T ss_dssp EEEEESSSCEEEEEETTTTEEEE--EECCCCTTCCCCEEETT--TTEEEEECTTSEEEEEETTTTE---EEEEEECCCSS
T ss_pred EEEecCCCceEEEEcCCCCceEE--EecCCCCccceEEECCC--CCEEEEEcCCCeEEEEECCCCe---EEEEEEcCCCC
Confidence 6665 48899999998876433 34435556889999998 5667777889999999864332 112222 1
Q ss_pred cccccceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCc
Q psy2762 158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSK 236 (318)
Q Consensus 158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~ 236 (318)
+...+..++|+|+. .+ +++...++.|.+||..+++....... .. ...+.|+|+ +
T Consensus 229 ~~~~~~~~~~s~dg-----------------~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~--~~~~~~s~d----g 283 (353)
T 3vgz_A 229 KEHFFINISLDTAR-----------------QRAFITDSKAAEVLVVDTRNGNILAKVAA--PE--SLAVLFNPA----R 283 (353)
T ss_dssp SCCCEEEEEEETTT-----------------TEEEEEESSSSEEEEEETTTCCEEEEEEC--SS--CCCEEEETT----T
T ss_pred CCcccceEEECCCC-----------------CEEEEEeCCCCEEEEEECCCCcEEEEEEc--CC--CceEEECCC----C
Confidence 33345668899873 44 44455569999999988765444332 22 257999997 5
Q ss_pred c-EEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762 237 C-MIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN 290 (318)
Q Consensus 237 ~-~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~ 290 (318)
. ++++...++.|.+||..+... ...+ .....+.+++|+|||++|+.+..++
T Consensus 284 ~~l~v~~~~~~~v~~~d~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 284 NEAYVTHRQAGKVSVIDAKSYKV--VKTF-DTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTTEE--EEEE-ECCSEEEEEEECTTSCEEEEEEECC
T ss_pred CEEEEEECCCCeEEEEECCCCeE--EEEE-ecCCCCCeEEEcCCCCEEEEEEccc
Confidence 5 555555799999999876431 1222 2345789999999999877776653
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=1.7e-16 Score=141.99 Aligned_cols=255 Identities=13% Similarity=0.079 Sum_probs=161.4
Q ss_pred eeecCCCCEEEEee----CCCcEEEEEcCCCcCCCCCCCCcce--EEEEecccccCeEEEEecCCCCCcEEEEEECC---
Q psy2762 19 AEMDYLGLYLATCS----SDHTVKVFNLDRNLKKDDSHSQKGT--LIAELKGHSGPVWQVAWAHPQFGTLLASCSYD--- 89 (318)
Q Consensus 19 ~~~~~~g~~l~s~s----~D~~v~vwd~~~~~~~~~~~~~~~~--~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D--- 89 (318)
.+..+...+++.|+ .++.|.+|.++.. +++ .+..+ |...+..++|++ ++++|++++.+
T Consensus 7 ~~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~---------~g~~~~~~~~--~~~~p~~l~~sp--dg~~l~~~~~~~~~ 73 (361)
T 3scy_A 7 PSTTDSELTMLVGTYTSGNSKGIYTFRFNEE---------TGESLPLSDA--EVANPSYLIPSA--DGKFVYSVNEFSKD 73 (361)
T ss_dssp CCGGGGEEEEEEEECCSSSCCEEEEEEEETT---------TCCEEEEEEE--ECSCCCSEEECT--TSSEEEEEECCSST
T ss_pred hhhCCCceEEEEEeccCCCCCCEEEEEEeCC---------CCCEEEeecc--cCCCCceEEECC--CCCEEEEEEccCCC
Confidence 33444455666664 4678999988521 233 23333 777788899974 58999999986
Q ss_pred -CeEEEEeCCC--CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc--------
Q psy2762 90 -RKVIIWRGDN--GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH-------- 158 (318)
Q Consensus 90 -g~v~vWd~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h-------- 158 (318)
+.|.+|++.. +..........+......+++ +. ..++++...++.|.+|++..............+
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 150 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKE 150 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTT
T ss_pred CCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCcc
Confidence 8999998765 444444444445566777887 42 334444456889999998543211111111111
Q ss_pred ---ccccceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCCe-------EE-----EEEEcccCCCC
Q psy2762 159 ---TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGDK-------WI-----EETKLENHSDW 222 (318)
Q Consensus 159 ---~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~~-------~~-----~~~~~~~h~~~ 222 (318)
...+..++|+|+ +++ +++...++.|++|++.... +. .... ..+...
T Consensus 151 ~~~~~~~~~~~~spd-----------------g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~ 212 (361)
T 3scy_A 151 RQTMPHLHCVRITPD-----------------GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK-VAPGSG 212 (361)
T ss_dssp TCSSCCEEEEEECTT-----------------SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CCTTCC
T ss_pred ccCCCcceEEEECCC-----------------CCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee-cCCCCC
Confidence 112356889997 344 4555568899999876432 21 1122 234455
Q ss_pred eeEEEEccCCCCCccEEEEEe-CCCeEEEEEcCCCcceeeEEee---ecCCcEEEEEEcCCCCEEEEEeCC--CeEEEEE
Q psy2762 223 VRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMN---TFDDVVWNVSWSLTGDILTVSCGD--NSVSLWK 296 (318)
Q Consensus 223 V~~v~~sp~~~~~~~~l~s~s-~D~~i~vw~~~~~~~~~~~~~~---~~~~~v~~v~~spdg~~l~s~~~D--~~v~iW~ 296 (318)
++.++|+|+ +++|+.++ .++.|++|++............ .+...+..++|+|||++|+++..+ ++|++|+
T Consensus 213 ~~~~~~spd----g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 213 PRHLIFNSD----GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp EEEEEECTT----SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CeEEEEcCC----CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 789999996 77676666 6999999998753211111121 122446899999999999777665 8999999
Q ss_pred EC-CCCceEEEeeecc
Q psy2762 297 EN-TDGAWQCITEMGK 311 (318)
Q Consensus 297 ~~-~~~~~~~~~~~~~ 311 (318)
++ .+|.+..+..+..
T Consensus 289 ~~~~~g~~~~~~~~~~ 304 (361)
T 3scy_A 289 VDETNGTLTKVGYQLT 304 (361)
T ss_dssp ECTTTCCEEEEEEEEC
T ss_pred EcCCCCcEEEeeEecC
Confidence 98 4667766665543
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=5.1e-18 Score=161.77 Aligned_cols=240 Identities=10% Similarity=0.050 Sum_probs=166.3
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeC---CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSS---DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~---D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la 84 (318)
+..+|...|..++|+|| +++++++. +...+||.++.. ..+... .+..+. .+...+|+++.++..++
T Consensus 59 lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~--------~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~ 127 (582)
T 3o4h_A 59 LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS--------RPGEEQ-RLEAVK-PMRILSGVDTGEAVVFT 127 (582)
T ss_dssp CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT--------STTCCE-ECTTSC-SBEEEEEEECSSCEEEE
T ss_pred eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc--------CCCccc-cccCCC-CceeeeeCCCCCeEEEE
Confidence 33333469999999999 78887775 566788776420 011111 232222 22345665443334566
Q ss_pred EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeeccccc
Q psy2762 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIAAHTI 160 (318)
Q Consensus 85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~~h~~ 160 (318)
+++.|+.+ +||+.+++...+.. +.. .+++|+|| +..+++++.+ ..|.+||...+. .+.+..|..
T Consensus 128 s~~~~~~~-l~d~~~g~~~~l~~---~~~--~~~~~spD--G~~la~~~~~~~~~~~i~~~d~~~g~----~~~l~~~~~ 195 (582)
T 3o4h_A 128 GATEDRVA-LYALDGGGLRELAR---LPG--FGFVSDIR--GDLIAGLGFFGGGRVSLFTSNLSSGG----LRVFDSGEG 195 (582)
T ss_dssp EECSSCEE-EEEEETTEEEEEEE---ESS--CEEEEEEE--TTEEEEEEEEETTEEEEEEEETTTCC----CEEECCSSC
T ss_pred ecCCCCce-EEEccCCcEEEeec---CCC--ceEEECCC--CCEEEEEEEcCCCCeEEEEEcCCCCC----ceEeecCCC
Confidence 66665555 99998876444332 222 78999999 7788877776 678888864332 345667777
Q ss_pred ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC--eEEEEEccCCeEEEEEEcccCCCCeeEEE--------Ecc
Q psy2762 161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN--LIKIWKQEGDKWIEETKLENHSDWVRDVA--------WAP 230 (318)
Q Consensus 161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~--~i~iwd~~~~~~~~~~~~~~h~~~V~~v~--------~sp 230 (318)
.+..++|+|+ ++.|+++..++ .|++||+.+++.. .+.+|...+..+. |+|
T Consensus 196 ~~~~~~~SpD-----------------G~~l~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 196 SFSSASISPG-----------------MKVTAGLETAREARLVTVDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLP 255 (582)
T ss_dssp EEEEEEECTT-----------------SCEEEEEECSSCEEEEEECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECT
T ss_pred ccccceECCC-----------------CCEEEEccCCCeeEEEEEcCCCCcEE---EccCCCcChhhhhhccccceeEcC
Confidence 8899999998 57888888888 8999999887653 5677877777777 999
Q ss_pred CCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCe-EEEEEECCCCc
Q psy2762 231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNS-VSLWKENTDGA 302 (318)
Q Consensus 231 ~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~-v~iW~~~~~~~ 302 (318)
+ |.++++++.|++++||++ + . ........|.+++|+ ||+.+++++.+.+ -++|..+..++
T Consensus 256 d----g~~~~~~~~~g~~~l~~~-g-~-----~~~~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~~ 316 (582)
T 3o4h_A 256 D----GRLAVVARREGRSAVFID-G-E-----RVEAPQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGEP 316 (582)
T ss_dssp T----SCEEEEEEETTEEEEEET-T-E-----EECCCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCE
T ss_pred C----CcEEEEEEcCCcEEEEEE-C-C-----eeccCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCCc
Confidence 7 688999999999999998 2 1 111345678999999 9999998887654 55666665543
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=2.2e-17 Score=145.38 Aligned_cols=227 Identities=9% Similarity=0.070 Sum_probs=150.4
Q ss_pred CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-ccc-CeEEEEecCCCCCcE-EEEEECCCeEEEEeCCCCcE
Q psy2762 26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSG-PVWQVAWAHPQFGTL-LASCSYDRKVIIWRGDNGNW 102 (318)
Q Consensus 26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-h~~-~V~~v~~~~~~~~~~-las~s~Dg~v~vWd~~~~~~ 102 (318)
++|++++.|++|.+||+. +++.+..+.. +.. .+..++|++ ++++ +++++.++.|.+||+.+++.
T Consensus 2 ~~~v~~~~~~~v~~~d~~-----------~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~~~~v~~~d~~~~~~ 68 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTE-----------KMAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNKSESLVKIDLVTGET 68 (337)
T ss_dssp EEEEEEETTTEEEEEETT-----------TTEEEEEEECTTCTTCCCCEEECT--TSSEEEEEETTTTEEEEEETTTCCE
T ss_pred cEEEEcCCCCeEEEEECC-----------CCcEEEEEEcCCCCCCccceEEcC--CCCEEEEEeCCCCeEEEEECCCCCe
Confidence 478999999999999986 3456666653 222 478899974 4655 46666789999999988775
Q ss_pred EEEEEecC---CCcCeEEEEeeCCCCCcEEEEee------------cCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 103 FKYYEYNN---HDSSVNSIAWAPKEFGLILACGS------------SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 103 ~~~~~~~~---h~~~v~~v~~~p~~~~~~lasgs------------~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
........ |...+.+++|+|+ +.++++++ .++.|.+||..... ....+. ....+..++|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~-~~~~~~~~~~ 142 (337)
T 1pby_B 69 LGRIDLSTPEERVKSLFGAALSPD--GKTLAIYESPVRLELTHFEVQPTRVALYDAETLS---RRKAFE-APRQITMLAW 142 (337)
T ss_dssp EEEEECCBTTEEEECTTCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE---EEEEEE-CCSSCCCEEE
T ss_pred EeeEEcCCcccccccccceEECCC--CCEEEEEecccccccccccccCceEEEEECCCCc---EEEEEe-CCCCcceeEE
Confidence 44443322 1225778999998 55566664 57899999874321 112222 2345677889
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe-CCC
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS-QDR 246 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~ 246 (318)
+|+ +++|+++ ++.|++||+.+++.........+.. .+.|+|+ +..|+..+ .++
T Consensus 143 s~d-----------------g~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~s~d----g~~l~~~~~~~~ 196 (337)
T 1pby_B 143 ARD-----------------GSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEA---ETYAQPD----VLAVWNQHESSG 196 (337)
T ss_dssp CTT-----------------SSCEEEE--SSSEEEEETTTTEEEEEECSTTTTT---TTBCCCB----CCCCCCCCTTTT
T ss_pred CCC-----------------CCEEEEe--CCeEEEEECCCCcEeeeeeccccCC---CceeCCC----ccEEeeeccCCC
Confidence 997 3556666 5789999998886543322221112 3378886 44343333 233
Q ss_pred -----------------------eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 247 -----------------------KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 247 -----------------------~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
.|.+||+.+.... ......+...+..++|+|||++|+++ ++.|++||...+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~ 270 (337)
T 1pby_B 197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN 270 (337)
T ss_dssp EEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT
T ss_pred ceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC
Confidence 4689998875432 22234455678899999999999888 799999997664
No 159
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=5.6e-16 Score=134.07 Aligned_cols=243 Identities=11% Similarity=0.155 Sum_probs=167.0
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec------ccccCeEEEEecCCCCCcEE
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK------GHSGPVWQVAWAHPQFGTLL 83 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~------~h~~~V~~v~~~~~~~~~~l 83 (318)
.||-..+.+++++++|+++++.+.++.|.+||.+ +..+..+. +|...+.++++..+ ++.++
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~------------g~~~~~~~~~~~~~~~~~~p~~i~~~~~-~g~l~ 92 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE------------GRFKFQFGECGKRDSQLLYPNRVAVVRN-SGDII 92 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT------------SCEEEEECCBSSSTTCBSSEEEEEEETT-TTEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC------------CcEEEEecccCCCcccccCceEEEEEcC-CCeEE
Confidence 3566788999999999999998889999999975 23344442 35567889998432 46666
Q ss_pred EEEEC-CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccc
Q psy2762 84 ASCSY-DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTI 160 (318)
Q Consensus 84 as~s~-Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~ 160 (318)
++... ++.|.+||.. ++....+. ..+...+.++++.|+ +.++++...++.|.+|+.. .. ....+. .+..
T Consensus 93 v~~~~~~~~i~~~d~~-g~~~~~~~-~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g~---~~~~~~~~~~~~ 164 (286)
T 1q7f_A 93 VTERSPTHQIQIYNQY-GQFVRKFG-ATILQHPRGVTVDNK--GRIIVVECKVMRVIIFDQN-GN---VLHKFGCSKHLE 164 (286)
T ss_dssp EEECGGGCEEEEECTT-SCEEEEEC-TTTCSCEEEEEECTT--SCEEEEETTTTEEEEECTT-SC---EEEEEECTTTCS
T ss_pred EEcCCCCCEEEEECCC-CcEEEEec-CccCCCceEEEEeCC--CCEEEEECCCCEEEEEcCC-CC---EEEEeCCCCccC
Confidence 66543 8999999944 44333221 123456899999998 5677777778889998742 11 122221 2334
Q ss_pred ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762 161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240 (318)
Q Consensus 161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 240 (318)
.+..++++|+ +..+++.+.++.|++||..... .......++...+..|+++|+ +.+++
T Consensus 165 ~p~~i~~~~~-----------------g~l~v~~~~~~~i~~~~~~g~~-~~~~~~~g~~~~p~~i~~d~~----G~l~v 222 (286)
T 1q7f_A 165 FPNGVVVNDK-----------------QEIFISDNRAHCVKVFNYEGQY-LRQIGGEGITNYPIGVGINSN----GEILI 222 (286)
T ss_dssp SEEEEEECSS-----------------SEEEEEEGGGTEEEEEETTCCE-EEEESCTTTSCSEEEEEECTT----CCEEE
T ss_pred CcEEEEECCC-----------------CCEEEEECCCCEEEEEcCCCCE-EEEEccCCccCCCcEEEECCC----CCEEE
Confidence 4677888885 4567777888999999986542 222222334467899999996 77888
Q ss_pred EEeCCC-eEEEEEcCCCcceeeEEeeecC--CcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 241 SCSQDR-KVIIWTSNDYVTWTPFIMNTFD--DVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 241 s~s~D~-~i~vw~~~~~~~~~~~~~~~~~--~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
+...++ .|++|+..... ...+..+. ..+.+++++|+|+++++ +.|++|++|+...
T Consensus 223 ~~~~~~~~i~~~~~~g~~---~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 223 ADNHNNFNLTIFTQDGQL---ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EECSSSCEEEEECTTSCE---EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EeCCCCEEEEEECCCCCE---EEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 887776 99999965432 22222222 34789999999987776 6799999998654
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=1.3e-18 Score=169.84 Aligned_cols=236 Identities=14% Similarity=0.109 Sum_probs=157.5
Q ss_pred eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc---CeEEEEecCCCCCcEEEEEEC-----
Q psy2762 17 HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG---PVWQVAWAHPQFGTLLASCSY----- 88 (318)
Q Consensus 17 ~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~v~~~~~~~~~~las~s~----- 88 (318)
..++|+|+|++++++ .|++|++||+.. ++....+.+|.. .|.+++|++ ||++||+++.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~la~~~~~~~~~ 84 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIET-----------GQSYTILSNRTMKSVNASNYGLSP--DRQFVYLESDYSKLW 84 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSS-----------CCEEEEECHHHHHTTTCSEEEECT--TSSEEEEEEEEEECS
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCC-----------CcEEEEEccccccccceeeEEECC--CCCeEEEEecCceeE
Confidence 368999999766654 699999999873 344555555554 489999974 5999999877
Q ss_pred ----CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccc--
Q psy2762 89 ----DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTI-- 160 (318)
Q Consensus 89 ----Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~-- 160 (318)
|++|.+||+.+++......+ ...+..++|+|| +..||.+. ++.|++|+...+.. ..+. ++..
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPD--G~~la~~~-~~~i~~~~~~~g~~----~~l~~~~~~~~v 154 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPV--GSKLAYVY-QNNIYLKQRPGDPP----FQITFNGRENKI 154 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSS--TTCEEEEE-TTEEEEESSTTSCC----EECCCCCBTTTE
T ss_pred EeecceEEEEEECCCCccccceec---CcccccceECCC--CCEEEEEE-CCeEEEEeCCCCCc----EEEecCCCcCCe
Confidence 79999999988753110122 356889999999 66777765 78999998743321 1221 2221
Q ss_pred ---------------ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC---------------------------
Q psy2762 161 ---------------GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN--------------------------- 198 (318)
Q Consensus 161 ---------------~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~--------------------------- 198 (318)
....++|+|+ +++||+++.|.
T Consensus 155 ~~g~~~~v~~ee~~~~~~~~~wSPD-----------------G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 155 FNGIPDWVYEEEMLATKYALWWSPN-----------------GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp EESSCCHHHHHHTTCSSCCEEECTT-----------------SSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred EcccccceeeeecccCcccEEECCC-----------------CCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 1147899998 46777776552
Q ss_pred -------eEEEEEccCCeEE---EE---EEcccCCCCeeEEEEccCCCCCccEEEEEeCC----CeEEEEE----cCCCc
Q psy2762 199 -------LIKIWKQEGDKWI---EE---TKLENHSDWVRDVAWAPSWGLSKCMIASCSQD----RKVIIWT----SNDYV 257 (318)
Q Consensus 199 -------~i~iwd~~~~~~~---~~---~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D----~~i~vw~----~~~~~ 257 (318)
.|++||+.+++.. +. ..+.+|...+..++|||+ +.++++.... ..|.+|+ ..+..
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD----~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~ 293 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD----ERVCLQWLKRVQNVSVLSICDFREDWQTWD 293 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS----SEEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC----CeEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence 7889998876421 11 123468888999999996 6677764432 2488888 55432
Q ss_pred ceeeEEe----eecCCcEE-----EEEEcCCCCEEEE--EeCCCeEEEEEECC
Q psy2762 258 TWTPFIM----NTFDDVVW-----NVSWSLTGDILTV--SCGDNSVSLWKENT 299 (318)
Q Consensus 258 ~~~~~~~----~~~~~~v~-----~v~~spdg~~l~s--~~~D~~v~iW~~~~ 299 (318)
.. ..+ ..+...+. .+.|+|||+.|+. ...++..+||-.+.
T Consensus 294 ~~--~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 294 CP--KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp CC--GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred eE--EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEEC
Confidence 11 112 34566666 8899999996654 44666555555443
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=7.5e-18 Score=165.30 Aligned_cols=259 Identities=13% Similarity=0.092 Sum_probs=158.7
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCe-----EEEEecCCCCCcEEEE
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV-----WQVAWAHPQFGTLLAS 85 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V-----~~v~~~~~~~~~~las 85 (318)
++......+.|+|+|++|+++ |++|++||+.. ++....+.+|...+ ..++|++ ||++|++
T Consensus 14 ~~~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Sp--dg~~l~~ 78 (740)
T 4a5s_A 14 TYRLKLYSLRWISDHEYLYKQ--ENNILVFNAEY-----------GNSSVFLENSTFDEFGHSINDYSISP--DGQFILL 78 (740)
T ss_dssp CSCCCCCCEEECSSSEEEEEE--TTEEEEEETTT-----------CCEEEEECTTTTTTCCSCCCEEEECT--TSSEEEE
T ss_pred cccccccccEECCCCcEEEEc--CCcEEEEECCC-----------CceEEEEechhhhhhcccccceEECC--CCCEEEE
Confidence 344567789999999999986 99999999863 34455577776432 3467774 5999999
Q ss_pred EECC---------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec
Q psy2762 86 CSYD---------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA 156 (318)
Q Consensus 86 ~s~D---------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~ 156 (318)
++.+ +.+.+||+.+++. ..+..|...+..++|+|| +..||.+ .|+.|.+|+...+. ...+.
T Consensus 79 ~~~~~~~~r~~~~~~~~~~d~~~~~~---~~l~~~~~~~~~~~~SPd--G~~la~~-~~~~i~~~~~~~~~----~~~lt 148 (740)
T 4a5s_A 79 EYNYVKQWRHSYTASYDIYDLNKRQL---ITEERIPNNTQWVTWSPV--GHKLAYV-WNNDIYVKIEPNLP----SYRIT 148 (740)
T ss_dssp EEEEEECSSSCEEEEEEEEETTTTEE---CCSSCCCTTEEEEEECSS--TTCEEEE-ETTEEEEESSTTSC----CEECC
T ss_pred EECCeeeEEEccceEEEEEECCCCcE---EEcccCCCcceeeEECCC--CCEEEEE-ECCeEEEEECCCCc----eEEEc
Confidence 9887 4556999998753 235567788999999999 6667776 47889999764332 12221
Q ss_pred --cccc-----------------ccceeeeCCCCCCCccccccCCCCC--------------Cccc---eEEEecCC--C
Q psy2762 157 --AHTI-----------------GCNAVSWGPGIGSLSELDLKGSKLG--------------GVAK---RLVSGGCD--N 198 (318)
Q Consensus 157 --~h~~-----------------~v~~~~~~p~~~~~~~~~~~~~~~~--------------~~~~---~lasgs~d--~ 198 (318)
++.. ....+.|||+...+.....+..... .... +-..|..+ .
T Consensus 149 ~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~ 228 (740)
T 4a5s_A 149 WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTV 228 (740)
T ss_dssp SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEE
T ss_pred CCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCee
Confidence 2211 1234889998432211100000000 0000 00011111 1
Q ss_pred eEEEEEccC---C---eEEEEEE---cccCCCCeeEEEEccCCCCCccEEEEEe----CCCeEEEEEcCCCc----ceee
Q psy2762 199 LIKIWKQEG---D---KWIEETK---LENHSDWVRDVAWAPSWGLSKCMIASCS----QDRKVIIWTSNDYV----TWTP 261 (318)
Q Consensus 199 ~i~iwd~~~---~---~~~~~~~---~~~h~~~V~~v~~sp~~~~~~~~l~s~s----~D~~i~vw~~~~~~----~~~~ 261 (318)
.|+|||+.+ + +...... +.+|...+..++|+|+ |+.++... .+..|++||+.+.. +...
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd----g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~ 304 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ----ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVA 304 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET----TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGG
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC----CeEEEEEeCCCCCEEEEEEEECCCCccccceeEE
Confidence 588899987 6 3322211 1147888999999997 66555543 33479999987654 1111
Q ss_pred E--EeeecCCcEE-----EEEEcCCCCEEE-EEe-CCC--eEEEEEEC
Q psy2762 262 F--IMNTFDDVVW-----NVSWSLTGDILT-VSC-GDN--SVSLWKEN 298 (318)
Q Consensus 262 ~--~~~~~~~~v~-----~v~~spdg~~l~-s~~-~D~--~v~iW~~~ 298 (318)
. ....+..+|. +++|+|||+.|+ ..+ .+| .|.+|+.+
T Consensus 305 ~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 305 RQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp GCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred EEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECC
Confidence 1 1134555554 789999999887 665 444 56666643
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=8.2e-17 Score=145.07 Aligned_cols=252 Identities=11% Similarity=0.003 Sum_probs=158.2
Q ss_pred cCCCcceeee-----eeecCCCCEEEEeeC-CCc--EEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCC
Q psy2762 9 DTGHEDMIHD-----AEMDYLGLYLATCSS-DHT--VKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80 (318)
Q Consensus 9 ~~gH~~~v~~-----~~~~~~g~~l~s~s~-D~~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~ 80 (318)
++.|...+.. ++|+|||++|+.++. ++. |.+||+. .++......+|...+..+.|++ ++
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~-----------~g~~~~lt~~~~~~~~~~~~sp--dg 92 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLN-----------TQVATQLTEGRGDNTFGGFLSP--DD 92 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT-----------TCEEEECCCSSCBCSSSCEECT--TS
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCC-----------CCceEEeeeCCCCCccceEEcC--CC
Confidence 3456666665 899999999999887 775 6666765 3455555556666666778974 59
Q ss_pred cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEE--eeCCCCCcEEEEe----------------------ecCC
Q psy2762 81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIA--WAPKEFGLILACG----------------------SSDG 136 (318)
Q Consensus 81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~--~~p~~~~~~lasg----------------------s~d~ 136 (318)
+.|+.++.++.|.+||+.+++...+.. .+...+.... ++|+ +.+++.. ..+.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~--~~~~~~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQ--VPAEWVGYGTWVANSD--CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEE--CCTTEEEEEEEEECTT--SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeee--chhhcccccceeECCC--CCeeccccccCcccccccccchhhhhhccCCcc
Confidence 999999999999999999887555444 3444444343 4777 5556532 2335
Q ss_pred eEEEEEeecCCCCcceeeecccccccceeeeCC-CCCCCccccccCCCCCCccceEEEecCC------CeEEEEEccCCe
Q psy2762 137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP-GIGSLSELDLKGSKLGGVAKRLVSGGCD------NLIKIWKQEGDK 209 (318)
Q Consensus 137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~~~~~~~~~~~~~~~~~lasgs~d------~~i~iwd~~~~~ 209 (318)
.|.+||...+ +...+..+...+..+.|+| + +..|+..+.+ ..|.++|..+++
T Consensus 169 ~l~~~d~~~g----~~~~l~~~~~~~~~~~~sp~d-----------------g~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 169 RLMRVDLKTG----ESTVILQENQWLGHPIYRPYD-----------------DSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp EEEEEETTTC----CEEEEEEESSCEEEEEEETTE-----------------EEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred eEEEEECCCC----ceEEeecCCccccccEECCCC-----------------CCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 6777776433 2344555666678889999 6 4566665543 367777776654
Q ss_pred EEEEEEcccCC--CCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcceeeEEeeecCCc---EEEEEEcCC
Q psy2762 210 WIEETKLENHS--DWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDV---VWNVSWSLT 279 (318)
Q Consensus 210 ~~~~~~~~~h~--~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~~~~~~~~~~~~~---v~~v~~spd 279 (318)
. ..+..+. ..+..+.|+|+ |+.|+..+.+ ..|.+||+.+...........+... ...+.|+||
T Consensus 228 ~---~~l~~~~~~~~~~~~~~spd----g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spd 300 (388)
T 3pe7_A 228 M---RKVKTHAEGESCTHEFWVPD----GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGD 300 (388)
T ss_dssp C---EESCCCCTTEEEEEEEECTT----SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEE
T ss_pred e---EEeeeCCCCcccccceECCC----CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccC
Confidence 3 2233343 35788999996 6666554432 2499999887542211111111000 112379999
Q ss_pred CCEEEEE---------eCCCeEEEEEECCCCceEEE
Q psy2762 280 GDILTVS---------CGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 280 g~~l~s~---------~~D~~v~iW~~~~~~~~~~~ 306 (318)
|+.|+.. ..+..|.+|+... ++...+
T Consensus 301 g~~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~l 335 (388)
T 3pe7_A 301 GSDAPVDVQDDSGYKIENDPFLYVFNMKN-GTQHRV 335 (388)
T ss_dssp ECCC------------CCCCEEEEEETTT-TEEEEE
T ss_pred CCcceeEeeeccccccCCCCEEEEEeccC-CceEEe
Confidence 9998854 4566899999765 344433
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.76 E-value=2.4e-15 Score=135.12 Aligned_cols=240 Identities=11% Similarity=0.074 Sum_probs=152.2
Q ss_pred EEEeeCC--CcEEEEEcCCCcCCCCCCCCcceE--EEEec-ccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCC-CCc
Q psy2762 28 LATCSSD--HTVKVFNLDRNLKKDDSHSQKGTL--IAELK-GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD-NGN 101 (318)
Q Consensus 28 l~s~s~D--~~v~vwd~~~~~~~~~~~~~~~~~--~~~~~-~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~-~~~ 101 (318)
|+.|+.. +.|.+|+++.. ++.+ +.... ++...+..++|++ ++++|++++.+ .|.+|++. +++
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~---------~g~l~~~~~~~~~~~~~~~~~a~sp--dg~~l~~~~~~-~v~~~~~~~~g~ 72 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDE---------KLTCKLIKRTEIPQDEPISWMTFDH--ERKNIYGAAMK-KWSSFAVKSPTE 72 (365)
T ss_dssp EEEEESSSSCEEEEEEEETT---------TTEEEEEEEEECCTTCCCSEEEECT--TSSEEEEEEBT-EEEEEEEEETTE
T ss_pred EEEEEccCCCcEEEEEEECC---------CCCEEEeeEEccCCCCCCcEEEECC--CCCEEEEEccc-eEEEEEECCCCC
Confidence 4445543 56888877421 2332 22221 2344678899974 58999999988 99999986 665
Q ss_pred EEEEEEecCCCcCeEEEEeeCCCCCc--EEEEee-------------cCCeEEEEEeecCCCCcceeeec----cccccc
Q psy2762 102 WFKYYEYNNHDSSVNSIAWAPKEFGL--ILACGS-------------SDGTISFLTYMSDTNSWESRKIA----AHTIGC 162 (318)
Q Consensus 102 ~~~~~~~~~h~~~v~~v~~~p~~~~~--~lasgs-------------~d~~i~i~~~~~~~~~~~~~~~~----~h~~~v 162 (318)
.........+ +.+.+++|+|+ +. ++++++ .++.+.+|++..... ....+. .+...+
T Consensus 73 ~~~~~~~~~~-g~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~--~~~~~~~~~~~~~~~~ 147 (365)
T 1jof_A 73 IVHEASHPIG-GHPRANDADTN--TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK--LEKNVQNYEYQENTGI 147 (365)
T ss_dssp EEEEEEEECC-SSGGGGCTTSC--CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC--EEEEEEEEECCTTCCE
T ss_pred EEEeeEeecC-CCCccEEECCC--CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc--CcceEeeEEeCCCCcc
Confidence 4333332222 23566899998 55 344543 689999999853221 111121 134567
Q ss_pred ceeeeCCCCCCCccccccCCCCCCccceEEEec-CCCeEEEEEcc-CCeEEEEEEcc--cCCCCeeEEEEccCCCCCccE
Q psy2762 163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDNLIKIWKQE-GDKWIEETKLE--NHSDWVRDVAWAPSWGLSKCM 238 (318)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~~i~iwd~~-~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~~~~ 238 (318)
..++|+|+ +++|+++. .++.|++|++. +++......+. .|...++.+.|+|+ |++
T Consensus 148 ~~~~~spd-----------------G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spd----g~~ 206 (365)
T 1jof_A 148 HGMVFDPT-----------------ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPT----GNY 206 (365)
T ss_dssp EEEEECTT-----------------SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTT----SSE
T ss_pred eEEEECCC-----------------CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCC----CCE
Confidence 78999997 45566554 46799999997 66543333333 34566899999996 777
Q ss_pred EEEEeC-CCeEEEEEcCCCc-cee--eEEeeec-------CC------cEEEEE-EcCCCCEEEEEeCCC------eEEE
Q psy2762 239 IASCSQ-DRKVIIWTSNDYV-TWT--PFIMNTF-------DD------VVWNVS-WSLTGDILTVSCGDN------SVSL 294 (318)
Q Consensus 239 l~s~s~-D~~i~vw~~~~~~-~~~--~~~~~~~-------~~------~v~~v~-~spdg~~l~s~~~D~------~v~i 294 (318)
|++++. +++|.+|+..... ... ...+... .. .+..++ |+|||++|+++..+. +|++
T Consensus 207 l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v 286 (365)
T 1jof_A 207 LYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAG 286 (365)
T ss_dssp EEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE
T ss_pred EEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEE
Confidence 777765 7899999865311 111 1111111 11 588999 999999988776432 8999
Q ss_pred EEECCCCceEE
Q psy2762 295 WKENTDGAWQC 305 (318)
Q Consensus 295 W~~~~~~~~~~ 305 (318)
|+++..|+...
T Consensus 287 ~~~~~~g~~~~ 297 (365)
T 1jof_A 287 FKLRDCGSIEK 297 (365)
T ss_dssp EEECTTSCEEE
T ss_pred EEECCCCCEEE
Confidence 99976666554
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=1e-15 Score=135.72 Aligned_cols=251 Identities=10% Similarity=0.068 Sum_probs=169.9
Q ss_pred cceeeeeeecCCCCEEEEeeCC------------------------CcEEEEEcCCCcCCCCCCCCcceEEEEec-cccc
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSD------------------------HTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSG 67 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D------------------------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~ 67 (318)
-+.|.+++++|+|+++++.+.+ ++|.+||.. +++++..+. ++-.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-----------~g~~~~~~~~~~~~ 91 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN-----------NAEILQSSGKNLFY 91 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT-----------TCCEEEEECTTTCS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC-----------CCeEEeccCCCccC
Confidence 3578999999999999988877 478999875 244554443 4556
Q ss_pred CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc-EEEEEEe-------cCCCcCeEEEEeeCCCCCcEEEEee-cCCeE
Q psy2762 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-WFKYYEY-------NNHDSSVNSIAWAPKEFGLILACGS-SDGTI 138 (318)
Q Consensus 68 ~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~-~~~~~~~-------~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i 138 (318)
....+++++ +|+++++...++.|++||..... ......- .++-.....|+++|++ +.++++.+ .++.|
T Consensus 92 ~p~gia~d~--~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~-g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 92 LPHGLSIDT--DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPST-GAVFVSDGYCNSRI 168 (329)
T ss_dssp SEEEEEECT--TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTT-CCEEEEECSSCCEE
T ss_pred CceEEEECC--CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCC-CeEEEEeCCCCCeE
Confidence 788999963 58888888889999999976542 1222111 2334468899999932 66777776 68899
Q ss_pred EEEEeecCCCCcceeeecc----------cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC
Q psy2762 139 SFLTYMSDTNSWESRKIAA----------HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD 208 (318)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~~----------h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~ 208 (318)
++|+. .+. ....+.. +......++++|+. +..+++...++.|++|+.+++
T Consensus 169 ~~~~~-~g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~----------------g~l~v~d~~~~~I~~~~~~~G 228 (329)
T 3fvz_A 169 VQFSP-SGK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHL----------------DQLCVADRENGRIQCFKTDTK 228 (329)
T ss_dssp EEECT-TSC---EEEEECEECCSSSCCTTEESCEEEEEEETTT----------------TEEEEEETTTTEEEEEETTTC
T ss_pred EEEcC-CCC---EEEEeccCCCCCCCCCcccCCCcEEEEECCC----------------CEEEEEECCCCEEEEEECCCC
Confidence 98873 221 1122211 11224567777752 357788888999999999867
Q ss_pred eEEEEEEcccCCCCeeEEEEccCCC--CCccEEEEEeCCCeEEEEEcCCCcceeeEEe---eecCCcEEEEEEcCCCCEE
Q psy2762 209 KWIEETKLENHSDWVRDVAWAPSWG--LSKCMIASCSQDRKVIIWTSNDYVTWTPFIM---NTFDDVVWNVSWSLTGDIL 283 (318)
Q Consensus 209 ~~~~~~~~~~h~~~V~~v~~sp~~~--~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~---~~~~~~v~~v~~spdg~~l 283 (318)
++........+...+..++|+|..- .++...++.+.+.+|++|+..+... ...+ ..+...+..++++|||+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 229 EFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp CEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred cEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCCEE
Confidence 6655544456777899999999100 0122233333455899999776532 2222 2344568999999999888
Q ss_pred EEEeCCCeEEEEEECC
Q psy2762 284 TVSCGDNSVSLWKENT 299 (318)
Q Consensus 284 ~s~~~D~~v~iW~~~~ 299 (318)
++...++.|++|+.+.
T Consensus 307 vad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 307 IGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEESSSCCEEEEEEEE
T ss_pred EEECCCCEEEEEeCCc
Confidence 8888899999998654
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=9.8e-17 Score=144.55 Aligned_cols=249 Identities=11% Similarity=0.024 Sum_probs=159.0
Q ss_pred ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE-
Q psy2762 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC- 86 (318)
Q Consensus 8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~- 86 (318)
+..+|...+..+.|+|||++|+.++.++.|.+||+.. ++....+..+.+.+....|....++.+++..
T Consensus 75 lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-----------g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 143 (388)
T 3pe7_A 75 LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLAT-----------LEENVVYQVPAEWVGYGTWVANSDCTKLVGIE 143 (388)
T ss_dssp CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTT-----------CCEEEEEECCTTEEEEEEEEECTTSSEEEEEE
T ss_pred eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCC-----------CcceeeeechhhcccccceeECCCCCeecccc
Confidence 4556776777889999999999999999999999973 3333344555555554444212357877742
Q ss_pred ---------------------ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeC-CCCCcEEEEeecCC------eE
Q psy2762 87 ---------------------SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP-KEFGLILACGSSDG------TI 138 (318)
Q Consensus 87 ---------------------s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~~lasgs~d~------~i 138 (318)
+.+..|.+||+.+++...+ ..+...+..++|+| + +..++....+. .|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l---~~~~~~~~~~~~sp~d--g~~l~~~~~~~~~~~~~~l 218 (388)
T 3pe7_A 144 IRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI---LQENQWLGHPIYRPYD--DSTVAFCHEGPHDLVDARM 218 (388)
T ss_dssp EEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE---EEESSCEEEEEEETTE--EEEEEEEECSCTTTSSCSE
T ss_pred ccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe---ecCCccccccEECCCC--CCEEEEEEecCCCCCcceE
Confidence 3457899999988764333 23556789999999 8 56666665432 45
Q ss_pred EEEEeecCCCCcceeeecccc--cccceeeeCCCCCCCccccccCCCCCCccceEEEecC--C---CeEEEEEccCCeEE
Q psy2762 139 SFLTYMSDTNSWESRKIAAHT--IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC--D---NLIKIWKQEGDKWI 211 (318)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~--d---~~i~iwd~~~~~~~ 211 (318)
.+++.. .. ....+..+. ..+....|+|+ ++.|+..+. + ..|++||+.+++..
T Consensus 219 ~~~d~~--~~--~~~~l~~~~~~~~~~~~~~spd-----------------g~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 219 WLINED--GT--NMRKVKTHAEGESCTHEFWVPD-----------------GSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp EEEETT--SC--CCEESCCCCTTEEEEEEEECTT-----------------SSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred EEEeCC--CC--ceEEeeeCCCCcccccceECCC-----------------CCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 555532 21 223343333 24667889997 344544332 1 24999999888654
Q ss_pred EEEEcccCCCC---eeEEEEccCCCCCccEEEEE---------eCCCeEEEEEcCCCcceeeEEeeecCC----------
Q psy2762 212 EETKLENHSDW---VRDVAWAPSWGLSKCMIASC---------SQDRKVIIWTSNDYVTWTPFIMNTFDD---------- 269 (318)
Q Consensus 212 ~~~~~~~h~~~---V~~v~~sp~~~~~~~~l~s~---------s~D~~i~vw~~~~~~~~~~~~~~~~~~---------- 269 (318)
....+.++... ...+.|+|+ |+.|+.. ..+..|.+|++.+.. ...+..+..
T Consensus 278 ~l~~~~~~~~~~~~~~~~~~spd----g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~~~~ 350 (388)
T 3pe7_A 278 QLTSMPACSHLMSNYDGSLMVGD----GSDAPVDVQDDSGYKIENDPFLYVFNMKNGT---QHRVARHDTSWKVFEGDRQ 350 (388)
T ss_dssp EEEEECCEEEEEECTTSSEEEEE----ECCC------------CCCCEEEEEETTTTE---EEEEEECCCCCCCBTTBSS
T ss_pred EEEcCCCceeeeecCCCCeEccC----CCcceeEeeeccccccCCCCEEEEEeccCCc---eEEeccccCcccccccccc
Confidence 44444442111 122479996 6666643 456789999988743 233444443
Q ss_pred -cEEEEEEcCCCCEEEEEe-CCCeEEEEEECCC
Q psy2762 270 -VVWNVSWSLTGDILTVSC-GDNSVSLWKENTD 300 (318)
Q Consensus 270 -~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~ 300 (318)
.+.+++|+|||+.|+.++ .++..+||.++..
T Consensus 351 ~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 351 VTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp TTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 477899999999888776 5788889987653
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=3.9e-16 Score=150.81 Aligned_cols=255 Identities=10% Similarity=0.046 Sum_probs=168.8
Q ss_pred cCCCcceeeeeeecCCCCEEEEe--eCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeE---------EEEecC-
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATC--SSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW---------QVAWAH- 76 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~--s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~---------~v~~~~- 76 (318)
..+|...|..++|++++.++++. +.++..+||.+... + ....+..|...|. ...|+.
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~----------~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~S 87 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD----------G-AEESALPAPWNVRNRVFEYSGFPWAGVPR 87 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT----------S-CEEESSCTTCCBCCCGGGTCCCCEEEECC
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC----------C-CcceeCCCCccccccccccCCccceeeee
Confidence 34789999999999988888887 66899999986311 2 2455666766665 566652
Q ss_pred CCCCcE-EEEEEC-CCeEEEEeCC--C-CcEEEEEEecC-----CCcCeEEEEeeCCCCCcEEEEeecC----------C
Q psy2762 77 PQFGTL-LASCSY-DRKVIIWRGD--N-GNWFKYYEYNN-----HDSSVNSIAWAPKEFGLILACGSSD----------G 136 (318)
Q Consensus 77 ~~~~~~-las~s~-Dg~v~vWd~~--~-~~~~~~~~~~~-----h~~~v~~v~~~p~~~~~~lasgs~d----------~ 136 (318)
| ||++ |+.++. +..|.+|++. . +... .+.. |...+.+++|+|+ +..|++++.+ .
T Consensus 88 P-Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~---~l~~~~~~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 88 P-AGGPLLVFTHFGDQRLYAFEPDAPGGAVPR---PLTPVSAVGGGLRWADPVLLPE--RGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp S-SSSCEEEEEBTTTCCEEEECTTSTTCCCCE---ECSCCCCSTTCEEEEEEEEETT--TTEEEEEEEEECSSSTTCEEE
T ss_pred c-CCCeEEEEEECCCCeEEEEcCCCCCCCCCE---eccCCccCCCCccccCcEECCC--CCEEEEEEecccCCCCCCcee
Confidence 4 5777 666554 4566666665 2 3322 2333 5677899999999 6677777766 4
Q ss_pred eEEEEEeecCC--CCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC--------CeEEEEEc
Q psy2762 137 TISFLTYMSDT--NSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD--------NLIKIWKQ 205 (318)
Q Consensus 137 ~i~i~~~~~~~--~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d--------~~i~iwd~ 205 (318)
.|.+|+..... .......+. .+...+..++|+|+ +++||..+.+ ..|++||+
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpD-----------------G~~la~~~~~~~~~~~~~~~i~~~d~ 224 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPD-----------------GRQAVWLAWDHPRMPWEGTELKTARV 224 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTT-----------------SSEEEEEEECTTCCTTTCEEEEEEEE
T ss_pred EEEEEECCCCccccCCceeEEEecCCCcccCceECCC-----------------CCEEEEEECCCCCCCCCCcEEEEEEE
Confidence 78888864310 001234454 55566778899997 5678877755 37999999
Q ss_pred c-CCeEEEE-EEcccCCCCeeEEEEccCCCCCccEEEEEeCCC--eEEEEEcCCCcceeeEEeeecC-Cc--------EE
Q psy2762 206 E-GDKWIEE-TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR--KVIIWTSNDYVTWTPFIMNTFD-DV--------VW 272 (318)
Q Consensus 206 ~-~~~~~~~-~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~--~i~vw~~~~~~~~~~~~~~~~~-~~--------v~ 272 (318)
. +++.... ....+|...+..+.|+|+ |++++++..|+ .|.+|++.+.. ...+..+. .. +.
T Consensus 225 ~~~g~~~~~~~l~~~~~~~~~~~~~spd----g~l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w~~~~~ 297 (662)
T 3azo_A 225 TEDGRFADTRTLLGGPEEAIAQAEWAPD----GSLIVATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLWTPGMR 297 (662)
T ss_dssp CTTSCEEEEEEEEEETTBCEEEEEECTT----SCEEEEECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCCSTTCC
T ss_pred CCCCcccccEEeCCCCCceEcceEECCC----CeEEEEECCCCCeEEEEEECCCCc---eeecccccccccCccccccCc
Confidence 8 4521111 222356778999999996 66888888888 45555553332 12222111 11 56
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEECCC-CceEE
Q psy2762 273 NVSWSLTGDILTVSCGDNSVSLWKENTD-GAWQC 305 (318)
Q Consensus 273 ~v~~spdg~~l~s~~~D~~v~iW~~~~~-~~~~~ 305 (318)
+++|+|++++++++.. ++++||.++.. ++.+.
T Consensus 298 ~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~ 330 (662)
T 3azo_A 298 WFAPLANGLIAVVHGK-GAAVLGILDPESGELVD 330 (662)
T ss_dssp SEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEE
T ss_pred eEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEE
Confidence 7899999999999999 99999977653 44433
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.72 E-value=8.8e-17 Score=156.87 Aligned_cols=238 Identities=13% Similarity=0.187 Sum_probs=156.0
Q ss_pred eeeeeeecCCCCEEEEeeC---------CCcEEEEEcCCCcCCCCCCCCcceEE--EEecccccCeEEEEecCCCCCcEE
Q psy2762 15 MIHDAEMDYLGLYLATCSS---------DHTVKVFNLDRNLKKDDSHSQKGTLI--AELKGHSGPVWQVAWAHPQFGTLL 83 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~---------D~~v~vwd~~~~~~~~~~~~~~~~~~--~~~~~h~~~V~~v~~~~~~~~~~l 83 (318)
.|.+++|||||++|++++. |++|++||++. ++.+ ..+ ...+..++|++ ||+.|
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~-----------g~~~~~~~l---~~~~~~~~~SP--DG~~l 124 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN-----------GEFVRGNEL---PRPIQYLCWSP--VGSKL 124 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-----------TEECCSSCC---CSSBCCEEECS--STTCE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC-----------Cccccceec---CcccccceECC--CCCEE
Confidence 3889999999999999876 79999999973 2321 112 35688899974 59999
Q ss_pred EEEECCCeEEEEeCCCCcEEEEEEecCCCcCe-----------------EEEEeeCCCCCcEEEEeecCC----------
Q psy2762 84 ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV-----------------NSIAWAPKEFGLILACGSSDG---------- 136 (318)
Q Consensus 84 as~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v-----------------~~v~~~p~~~~~~lasgs~d~---------- 136 (318)
|+++ |+.|++|++.+++...+ ...++...| .+++|+|| +..|++++.|.
T Consensus 125 a~~~-~~~i~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD--G~~la~~~~d~~~~~~~~~~~ 200 (719)
T 1z68_A 125 AYVY-QNNIYLKQRPGDPPFQI-TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPN--GKFLAYAEFNDTDIPVIAYSY 200 (719)
T ss_dssp EEEE-TTEEEEESSTTSCCEEC-CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTT--SSEEEEEEEECTTSCEEEEEE
T ss_pred EEEE-CCeEEEEeCCCCCcEEE-ecCCCcCCeEcccccceeeeecccCcccEEECCC--CCEEEEEEECCCCCceEEeec
Confidence 9986 88999999987754332 112332222 48999999 67788877652
Q ss_pred ------------------------eEEEEEeecCCCC--cce---eeecccccccceeeeCCCCCCCccccccCCCCCCc
Q psy2762 137 ------------------------TISFLTYMSDTNS--WES---RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGV 187 (318)
Q Consensus 137 ------------------------~i~i~~~~~~~~~--~~~---~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~ 187 (318)
.|.+||...+... ..+ ..+.+|...+..++|+|+
T Consensus 201 ~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD----------------- 263 (719)
T 1z68_A 201 YGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD----------------- 263 (719)
T ss_dssp CCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-----------------
T ss_pred cCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-----------------
Confidence 6677776332100 000 112356677889999997
Q ss_pred cceEEEec--CC--CeEEEEE----ccCCeEEEEEEc----ccCCCCee-----EEEEccCCCCCccEEE--EEeCCC--
Q psy2762 188 AKRLVSGG--CD--NLIKIWK----QEGDKWIEETKL----ENHSDWVR-----DVAWAPSWGLSKCMIA--SCSQDR-- 246 (318)
Q Consensus 188 ~~~lasgs--~d--~~i~iwd----~~~~~~~~~~~~----~~h~~~V~-----~v~~sp~~~~~~~~l~--s~s~D~-- 246 (318)
++.+++.. .+ ..|.+|| ..++++. ..+ .+|..++. .+.|+|+ |..|+ +...++
T Consensus 264 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~spd----g~~l~~~~~~~~g~~ 337 (719)
T 1z68_A 264 ERVCLQWLKRVQNVSVLSICDFREDWQTWDCP--KTQEHIEESRTGWAGGFFVSTPVFSYD----AISYYKIFSDKDGYK 337 (719)
T ss_dssp SEEEEEEEESSTTEEEEEEEEECSSSSSEECC--GGGEEEEECSSSCSSSSSCCCCEECTT----SSCEEEEEECTTSCE
T ss_pred CeEEEEEeccccCeEEEEEEcccCCCCCCceE--EEEecccccCCceEccccCCccEECCC----CCeEEEEEEccCCce
Confidence 34555533 22 2477888 6665432 222 46777777 8999997 55443 344566
Q ss_pred eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEECC
Q psy2762 247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENT 299 (318)
Q Consensus 247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-----~~v~iW~~~~ 299 (318)
.|.+|++.+.. ...+..+...|..+.++ +|+.|+..+.+ +..+||.++.
T Consensus 338 ~l~~~~~~~~~---~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 338 HIHYIKDTVEN---AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEEESSCSTT---CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EEEEEECCCCc---eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 45566665433 23344444557788888 88887777654 8899999877
No 168
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.69 E-value=2.1e-14 Score=140.11 Aligned_cols=251 Identities=10% Similarity=-0.005 Sum_probs=160.4
Q ss_pred cCCCcceeeeeeecCCCCEEEEeeCCC-----cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATCSSDH-----TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL 83 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l 83 (318)
..+|...+..++|||||++|+.++.++ +|+|||+.. ++.+.... ....+..++|++ ||+.|
T Consensus 120 ~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t-----------g~~~~~~~-~~~~~~~~~wsp--Dg~~l 185 (710)
T 2xdw_A 120 SDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG-----------AKELPDVL-ERVKFSCMAWTH--DGKGM 185 (710)
T ss_dssp CTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT-----------TEEEEEEE-EEECSCCEEECT--TSSEE
T ss_pred ccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC-----------CCCCcccc-cCcccceEEEEe--CCCEE
Confidence 356666788999999999998766544 899999973 34333211 222367799974 58999
Q ss_pred EEEECCCe----------------EEEEeCCCCcE--EEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-----CCeEEE
Q psy2762 84 ASCSYDRK----------------VIIWRGDNGNW--FKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-----DGTISF 140 (318)
Q Consensus 84 as~s~Dg~----------------v~vWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-----d~~i~i 140 (318)
+.++.|+. |.+|++.++.. ..++....|...+..++|+|+ +.+++..+. +..|.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~ 263 (710)
T 2xdw_A 186 FYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDD--GRYVLLSIREGCDPVNRLWY 263 (710)
T ss_dssp EEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT--SCEEEEEEECSSSSCCEEEE
T ss_pred EEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCC--CCEEEEEEEccCCCccEEEE
Confidence 99998876 99999987642 233333345666889999999 556665554 567888
Q ss_pred EEeec------CCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC----CCeEEEEEccCCeE
Q psy2762 141 LTYMS------DTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC----DNLIKIWKQEGDKW 210 (318)
Q Consensus 141 ~~~~~------~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~----d~~i~iwd~~~~~~ 210 (318)
|+... +. .....+..+...+.. .|+|+ +..|+..+. +..|.+||+.++..
T Consensus 264 ~d~~~~~~~~~~~--~~~~~l~~~~~~~~~-~~s~d-----------------g~~l~~~s~~~~~~~~l~~~d~~~~~~ 323 (710)
T 2xdw_A 264 CDLQQESNGITGI--LKWVKLIDNFEGEYD-YVTNE-----------------GTVFTFKTNRHSPNYRLINIDFTDPEE 323 (710)
T ss_dssp EEGGGSSSSSCSS--CCCEEEECSSSSCEE-EEEEE-----------------TTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred EECcccccccCCc--cceEEeeCCCCcEEE-EEecc-----------------CCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 88754 21 123344445444433 36664 234444333 33699999876531
Q ss_pred EEEEEcccCCC--CeeEEEEccCCCCCccEEEEEeCCCeEE--EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE
Q psy2762 211 IEETKLENHSD--WVRDVAWAPSWGLSKCMIASCSQDRKVI--IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS 286 (318)
Q Consensus 211 ~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~--vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~ 286 (318)
.....+..|.. .+..+.|+++ +.++++...|+..+ +|++.+.. ....+..+...|..++++|+++.|+.+
T Consensus 324 ~~~~~l~~~~~~~~~~~~~~~~~----~~lv~~~~~~g~~~l~~~~~~~g~--~~~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 324 SKWKVLVPEHEKDVLEWVACVRS----NFLVLCYLHDVKNTLQLHDLATGA--LLKIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp GGCEEEECCCSSCEEEEEEEETT----TEEEEEEEETTEEEEEEEETTTCC--EEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred ccceeccCCCCCCeEEEEEEEcC----CEEEEEEEECCEEEEEEEECCCCC--EEEecCCCCceEEEEecCCCCCEEEEE
Confidence 00122333433 6888999874 77889999998655 45653322 123344446678999999999876633
Q ss_pred -e---CCCeEEEEEECCCC
Q psy2762 287 -C---GDNSVSLWKENTDG 301 (318)
Q Consensus 287 -~---~D~~v~iW~~~~~~ 301 (318)
+ ..+++.+||+.++.
T Consensus 398 ~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 398 FTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECSSCCCEEEEEETTSSS
T ss_pred EeCCCCCCEEEEEECCCCc
Confidence 2 35689999876543
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.68 E-value=3.8e-14 Score=123.24 Aligned_cols=239 Identities=14% Similarity=0.083 Sum_probs=161.0
Q ss_pred CCcceeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 11 GHEDMIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
.+.....+++|+|+|+ +++++..++.|.+||.+ .+ ...+..+...+.++++++ +|+++++...+
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~-----------~~--~~~~~~~~~~~~~l~~~~--dg~l~v~~~~~ 89 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDD-----------GQ--LSPEMHPSHHQNGHCLNK--QGHLIACSHGL 89 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETT-----------SC--EEEEESSCSSEEEEEECT--TCCEEEEETTT
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECC-----------CC--eEEEECCCCCcceeeECC--CCcEEEEecCC
Confidence 3455778899999998 78888889999999986 22 455666778899999964 58888777777
Q ss_pred CeEEEEeCCCCcEEEEEEe-cC-CCcCeEEEEeeCCCCCcEEEE----eecC-----------CeEEEEEeecCCCCcce
Q psy2762 90 RKVIIWRGDNGNWFKYYEY-NN-HDSSVNSIAWAPKEFGLILAC----GSSD-----------GTISFLTYMSDTNSWES 152 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~-~~-h~~~v~~v~~~p~~~~~~las----gs~d-----------~~i~i~~~~~~~~~~~~ 152 (318)
+.|.+||..+++....... .. ....++.+++.|+ +.++++ |+.+ +.-.||.+... . ..
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~--G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~ 164 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD--GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--TL 164 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT--SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--CE
T ss_pred CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC--CCEEEECCccccccccccccccccCCCcEEEEECCC-C--CE
Confidence 9999999877764333211 11 1234678999998 667776 3311 11245555332 1 22
Q ss_pred eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc-CCeE-EEEEEcccCCCCeeEEEEcc
Q psy2762 153 RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE-GDKW-IEETKLENHSDWVRDVAWAP 230 (318)
Q Consensus 153 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~-~~~~-~~~~~~~~h~~~V~~v~~sp 230 (318)
..+..+....+.++|+|+ ++.|++.+.++.|++|++. .+++ .....+..+...+..+++++
T Consensus 165 ~~~~~~~~~~~gi~~s~d-----------------g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~ 227 (296)
T 3e5z_A 165 SAPIRDRVKPNGLAFLPS-----------------GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA 227 (296)
T ss_dssp EEEECCCSSEEEEEECTT-----------------SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT
T ss_pred EEeecCCCCCccEEECCC-----------------CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC
Confidence 333444455678899997 3556888888999999986 4443 22222234556678899999
Q ss_pred CCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEE-cCCCCEEEEEeCCCeEEEEEECC
Q psy2762 231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW-SLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 231 ~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~-spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
+ |.++++. ++.|.+|+..... ...+..+.. +.+++| +|+++.|+.++.++ ||.++.
T Consensus 228 ~----G~l~v~~--~~~v~~~~~~g~~---~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~---l~~~~~ 284 (296)
T 3e5z_A 228 G----GLIWASA--GDGVHVLTPDGDE---LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE---FWSIET 284 (296)
T ss_dssp T----SCEEEEE--TTEEEEECTTSCE---EEEEECSSC-CCEEEEESTTSCEEEEEETTE---EEEEEC
T ss_pred C----CCEEEEc--CCeEEEECCCCCE---EEEEECCCC-ceeEEEECCCCCEEEEEcCCe---EEEEEc
Confidence 6 6666655 8889999986432 233333445 889999 69999999888774 555444
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.68 E-value=2.1e-15 Score=135.88 Aligned_cols=236 Identities=8% Similarity=0.016 Sum_probs=147.2
Q ss_pred eeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEE-------------------EEecC
Q psy2762 16 IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ-------------------VAWAH 76 (318)
Q Consensus 16 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-------------------v~~~~ 76 (318)
...+.|+|||++|+..+.++.|.+||+... +.......+.+.... +.|++
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~-----------~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp 151 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKNELNLMKVDLETL-----------EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP 151 (396)
T ss_dssp TTTCEECTTSSEEEEEETTTEEEEEETTTC-----------CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred cccceECCCCCEEEEEEcCCcEEEEECCCC-----------CcEEEEecccccCCCCCEEEeccCCccccccccccccCC
Confidence 334789999999999999999999998632 222223333332222 23332
Q ss_pred CCCCcEEEEE-----ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeC-CCCCcEEEEeecC------CeEEEEEee
Q psy2762 77 PQFGTLLASC-----SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP-KEFGLILACGSSD------GTISFLTYM 144 (318)
Q Consensus 77 ~~~~~~las~-----s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~~lasgs~d------~~i~i~~~~ 144 (318)
+++.++.+ ..+..|.+||+.+++...+. .+...+..+.|+| + +..++..+.+ ..|.+|+..
T Consensus 152 --dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~~~sp~d--g~~l~~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 152 --LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGHPIYRPFD--DSTVGFCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp --CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEEEEEETTE--EEEEEEEECSCSSSCSCCCEEEETT
T ss_pred --CCcceeeeeeccCCCcceEEEEECCCCcEEeec---cCCcccccceECCCC--CCEEEEEecCCCCCCCceEEEEECC
Confidence 35554443 35678999999887644432 3556789999999 5 4445544443 245566542
Q ss_pred cCCCCcceeeeccc--ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcc
Q psy2762 145 SDTNSWESRKIAAH--TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLE 217 (318)
Q Consensus 145 ~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~ 217 (318)
.. ....+..+ ...+..+.|+|+ +++|+..+.+ +.|++||+.+++......+.
T Consensus 225 ~~----~~~~l~~~~~~~~~~~~~~spd-----------------g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 283 (396)
T 3c5m_A 225 GS----NVRKIKEHAEGESCTHEFWIPD-----------------GSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP 283 (396)
T ss_dssp SC----CCEESSCCCTTEEEEEEEECTT-----------------SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC
T ss_pred CC----ceeEeeccCCCccccceEECCC-----------------CCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC
Confidence 21 12233322 224667899997 3556655443 45999999887654444333
Q ss_pred cCCCCeeEEEEcc-CCCCCccEEEEEe----------------CCCeEEEEEcCCCcceeeEEeeecCC-----------
Q psy2762 218 NHSDWVRDVAWAP-SWGLSKCMIASCS----------------QDRKVIIWTSNDYVTWTPFIMNTFDD----------- 269 (318)
Q Consensus 218 ~h~~~V~~v~~sp-~~~~~~~~l~s~s----------------~D~~i~vw~~~~~~~~~~~~~~~~~~----------- 269 (318)
+ .. +.|+| + +.+|+.++ .+..|.+|++.+... ..+..+..
T Consensus 284 ~----~~-~~~s~~d----g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~~ 351 (396)
T 3c5m_A 284 P----CS-HLMSNFD----GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA---QKLCKHSTSWDVLDGDRQI 351 (396)
T ss_dssp S----EE-EEEECSS----SSEEEEEECCC----------CCCCCCEEEEEETTTTBC---CEEEECCCCCCCBTTBSST
T ss_pred C----CC-CCccCCC----CceEEEecCCcceeeccccccccCCCCcEEEEecccCce---EEccCCCCccccccccccC
Confidence 3 23 88999 7 66777655 347899999876532 22333332
Q ss_pred cEEEEEEcCCCCEEEEEeC-CCeEEEEEECCCCc
Q psy2762 270 VVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGA 302 (318)
Q Consensus 270 ~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~~~~ 302 (318)
.+.+++|+|||+.|+.++. ++...||.++..+.
T Consensus 352 ~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 352 THPHPSFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp TCCCCEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred CCCCceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 2567899999999887764 67888998875443
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.65 E-value=3.6e-15 Score=134.26 Aligned_cols=235 Identities=10% Similarity=0.028 Sum_probs=145.9
Q ss_pred eeeeeeecCCCCEEEEeeCC---CcEEEEEcCCCcCCCCCCCCcceEEEEecccccC-eEEEEecCCCCCcEEEEEECCC
Q psy2762 15 MIHDAEMDYLGLYLATCSSD---HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~~~~~~~~las~s~Dg 90 (318)
.+..++|+|||++|+..+.. ..|.+||+.. ++. ..+..+... ...+.|++ +|++|+.++.++
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~-----------~~~-~~l~~~~~~~~~~~~~sp--dg~~l~~~~~~~ 102 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET-----------QQA-VQLTEGKGDNTFGGFIST--DERAFFYVKNEL 102 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-----------TEE-EECCCSSCBCTTTCEECT--TSSEEEEEETTT
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCC-----------CcE-EEeecCCCCccccceECC--CCCEEEEEEcCC
Confidence 37889999999998876543 3577777752 333 333333333 33377874 589999999999
Q ss_pred eEEEEeCCCCcEEEEEEecCCCcCeEE-------------------EEeeCCCCCcEEEEe-----ecCCeEEEEEeecC
Q psy2762 91 KVIIWRGDNGNWFKYYEYNNHDSSVNS-------------------IAWAPKEFGLILACG-----SSDGTISFLTYMSD 146 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~-------------------v~~~p~~~~~~lasg-----s~d~~i~i~~~~~~ 146 (318)
.|.+||+.+++...+... +...... ++|+|+. ..++.. ..+..|.+|++..+
T Consensus 103 ~l~~~d~~~~~~~~~~~~--~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg--~~~~~~~~~~~~~~~~l~~~d~~~g 178 (396)
T 3c5m_A 103 NLMKVDLETLEEQVIYTV--DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT--SWEKFAEFYHTNPTCRLIKVDIETG 178 (396)
T ss_dssp EEEEEETTTCCEEEEEEC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC--SHHHHHHHHHTCCCEEEEEEETTTC
T ss_pred cEEEEECCCCCcEEEEec--ccccCCCCCEEEeccCCccccccccccccCCCC--cceeeeeeccCCCcceEEEEECCCC
Confidence 999999988765444332 2222222 3456663 333322 34556777776332
Q ss_pred CCCcceeeecccccccceeeeCC-CCCCCccccccCCCCCCccceEEEecCC------CeEEEEEccCCeEEEEEEcccC
Q psy2762 147 TNSWESRKIAAHTIGCNAVSWGP-GIGSLSELDLKGSKLGGVAKRLVSGGCD------NLIKIWKQEGDKWIEETKLENH 219 (318)
Q Consensus 147 ~~~~~~~~~~~h~~~v~~~~~~p-~~~~~~~~~~~~~~~~~~~~~lasgs~d------~~i~iwd~~~~~~~~~~~~~~h 219 (318)
+...+..+...+..+.|+| + +..|+..+.+ ..|.+||..+++... +..+
T Consensus 179 ----~~~~~~~~~~~~~~~~~sp~d-----------------g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~---l~~~ 234 (396)
T 3c5m_A 179 ----ELEVIHQDTAWLGHPIYRPFD-----------------DSTVGFCHEGPHDLVDARMWLVNEDGSNVRK---IKEH 234 (396)
T ss_dssp ----CEEEEEEESSCEEEEEEETTE-----------------EEEEEEEECSCSSSCSCCCEEEETTSCCCEE---SSCC
T ss_pred ----cEEeeccCCcccccceECCCC-----------------CCEEEEEecCCCCCCCceEEEEECCCCceeE---eecc
Confidence 2333445556677889998 4 3445554433 358888887654322 2223
Q ss_pred --CCCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEe----
Q psy2762 220 --SDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSC---- 287 (318)
Q Consensus 220 --~~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~---- 287 (318)
...+..+.|+|+ |.+|+.++.+ +.|.+|++.+... ..+..... .. +.|+| ||++|+.++
T Consensus 235 ~~~~~~~~~~~spd----g~~l~~~~~~~~~~~~~l~~~d~~~g~~---~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 235 AEGESCTHEFWIPD----GSAMAYVSYFKGQTDRVIYKANPETLEN---EEVMVMPP-CS-HLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp CTTEEEEEEEECTT----SSCEEEEEEETTTCCEEEEEECTTTCCE---EEEEECCS-EE-EEEECSSSSEEEEEECCC-
T ss_pred CCCccccceEECCC----CCEEEEEecCCCCccceEEEEECCCCCe---EEeeeCCC-CC-CCccCCCCceEEEecCCcc
Confidence 235788999996 7777777654 5599999876432 22222222 23 89999 999998765
Q ss_pred ------------CCCeEEEEEECCC
Q psy2762 288 ------------GDNSVSLWKENTD 300 (318)
Q Consensus 288 ------------~D~~v~iW~~~~~ 300 (318)
.+..|.+|+...+
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp ---------CCCCCCEEEEEETTTT
T ss_pred eeeccccccccCCCCcEEEEecccC
Confidence 3478999986553
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.65 E-value=1.8e-13 Score=121.29 Aligned_cols=229 Identities=11% Similarity=0.104 Sum_probs=148.8
Q ss_pred eeeeeeecCCCCEEEEeeCC---Cc--EEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 15 MIHDAEMDYLGLYLATCSSD---HT--VKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D---~~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
.+..++|+|||++|+..+.+ +. |.+|++.. ++... +..+.. +..+.|++ +|+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~-----------g~~~~-l~~~~~-~~~~~wsp--dg~~l~~~~~~ 124 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLET-----------LSSKK-ILEAKN-IRSLEWNE--DSRKLLIVGFK 124 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT-----------TEEEE-EEEESE-EEEEEECT--TSSEEEEEEEC
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC-----------CceEE-EEcCCC-ccceeECC--CCCEEEEEEcc
Confidence 46778999999999987754 34 56666642 33322 222334 99999974 58888887743
Q ss_pred ---------------------------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC------
Q psy2762 90 ---------------------------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG------ 136 (318)
Q Consensus 90 ---------------------------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~------ 136 (318)
..|.+||+.+++..... .. . .+..++|+|+ + +++++..+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l--~~-~-~~~~~~~spd--g-~~~~~~~~~~~~~~~ 197 (347)
T 2gop_A 125 RREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF--EK-P-RFSSGIWHRD--K-IVVNVPHREIIPQYF 197 (347)
T ss_dssp CCC---------CCCC---------CEEEEEEEETTTTEEEEEE--EE-E-TTCEEEEETT--E-EEEEEECCCSSCCSS
T ss_pred CCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeee--cC-C-CcccccCCCC--e-EEEEEeccccccccc
Confidence 57888999877641222 22 2 6889999998 5 666665542
Q ss_pred -eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC--------CeEEEEEccC
Q psy2762 137 -TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD--------NLIKIWKQEG 207 (318)
Q Consensus 137 -~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d--------~~i~iwd~~~ 207 (318)
...+|.+. .. +...+..+ ..+.. ++|+ +++|+.++.+ ..|.+|| +
T Consensus 198 ~~~~l~~~d--~~--~~~~l~~~-~~~~~--~spd-----------------g~~l~~~~~~~~~~~~~~~~l~~~d--~ 251 (347)
T 2gop_A 198 KFWDIYIWE--DG--KEEKMFEK-VSFYA--VDSD-----------------GERILLYGKPEKKYMSEHNKLYIYD--G 251 (347)
T ss_dssp CCEEEEEEE--TT--EEEEEEEE-ESEEE--EEEC-----------------SSCEEEEECCSSSCCCSSCEEEEEC--S
T ss_pred ccccEEEeC--CC--ceEEeccC-cceee--ECCC-----------------CCEEEEEEccccCCccccceEEEEC--C
Confidence 45666654 21 23344433 33333 3665 4566666543 3677887 4
Q ss_pred CeEEEEEEcccCCCCeeE-EEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE
Q psy2762 208 DKWIEETKLENHSDWVRD-VAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS 286 (318)
Q Consensus 208 ~~~~~~~~~~~h~~~V~~-v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~ 286 (318)
++.. ....+|...+.. +.|+ + + ++++++.|+.++|| +... ....+..+...|.+++|+| ..++++
T Consensus 252 ~~~~--~l~~~~~~~~~~~~~~s-d----g-~~~~~~~~~~~~l~-~~~g---~~~~~~~~~~~v~~~~~s~--~~~~~~ 317 (347)
T 2gop_A 252 KEVM--GILDEVDRGVGQAKIKD-G----K-VYFTLFEEGSVNLY-IWDG---EIKPIAKGRHWIMGFDVDE--IVVYLK 317 (347)
T ss_dssp SCEE--ESSTTCCSEEEEEEEET-T----E-EEEEEEETTEEEEE-EESS---SEEEEECSSSEEEEEEESS--SEEEEE
T ss_pred CceE--eccccCCcccCCccEEc-C----c-EEEEEecCCcEEEE-EcCC---ceEEEecCCCeEEeeeeeC--cEEEEE
Confidence 4432 223556677886 8998 6 6 89999999999999 8632 2233334567899999999 677778
Q ss_pred eCCCeE-EEEEECCCCceEEEe
Q psy2762 287 CGDNSV-SLWKENTDGAWQCIT 307 (318)
Q Consensus 287 ~~D~~v-~iW~~~~~~~~~~~~ 307 (318)
+.++.. +||..+ |....+.
T Consensus 318 ~~~~~~~~l~~~~--g~~~~lt 337 (347)
T 2gop_A 318 ETATRLRELFTWD--GEEKQLT 337 (347)
T ss_dssp ECSSSCCEEEEES--SSEEECC
T ss_pred cCCCChHHheEeC--CcEEEec
Confidence 777765 899887 5544443
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=2.9e-14 Score=137.69 Aligned_cols=257 Identities=9% Similarity=-0.048 Sum_probs=161.3
Q ss_pred cCCCcceee---------eeeec--CCCCE-EEEeeCCCcEEEEEcCCCcCCCCCCCCcc-eEEEEecc-----cccCeE
Q psy2762 9 DTGHEDMIH---------DAEMD--YLGLY-LATCSSDHTVKVFNLDRNLKKDDSHSQKG-TLIAELKG-----HSGPVW 70 (318)
Q Consensus 9 ~~gH~~~v~---------~~~~~--~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~~~~~-~~~~~~~~-----h~~~V~ 70 (318)
.++|...|. ...++ |||++ |+..+. ...+||.++.. ..+ .....+.. |...+.
T Consensus 63 l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~-~~~~l~~~~~~--------~~g~~~~~~l~~~~~~~~~~~~~ 133 (662)
T 3azo_A 63 ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF-GDQRLYAFEPD--------APGGAVPRPLTPVSAVGGGLRWA 133 (662)
T ss_dssp SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT-TTCCEEEECTT--------STTCCCCEECSCCCCSTTCEEEE
T ss_pred eCCCCccccccccccCCccceeeeecCCCeEEEEEEC-CCCeEEEEcCC--------CCCCCCCEeccCCccCCCCcccc
Confidence 345666666 55555 99998 775543 34455554310 001 12344555 677889
Q ss_pred EEEecCCCCCcEEEEEECC----------CeEEEEeCCC------CcEEEEEEec-CCCcCeEEEEeeCCCCCcEEEEee
Q psy2762 71 QVAWAHPQFGTLLASCSYD----------RKVIIWRGDN------GNWFKYYEYN-NHDSSVNSIAWAPKEFGLILACGS 133 (318)
Q Consensus 71 ~v~~~~~~~~~~las~s~D----------g~v~vWd~~~------~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~lasgs 133 (318)
+++|++ ||+.|++++.| ..|.+||+.+ +... .+. .+...+..++|+|| +..|+..+
T Consensus 134 ~~~~sp--Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~SpD--G~~la~~~ 206 (662)
T 3azo_A 134 DPVLLP--ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR---ELSDDAHRFVTGPRLSPD--GRQAVWLA 206 (662)
T ss_dssp EEEEET--TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE---ESSCSCSSEECCCEECTT--SSEEEEEE
T ss_pred CcEECC--CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee---EEEecCCCcccCceECCC--CCEEEEEE
Confidence 999984 59999999887 5899999987 5432 234 45567888999999 66777766
Q ss_pred cC--------CeEEEEEee-cCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC--eEE
Q psy2762 134 SD--------GTISFLTYM-SDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN--LIK 201 (318)
Q Consensus 134 ~d--------~~i~i~~~~-~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~--~i~ 201 (318)
.+ ..|.+|++. .+. ......+. .|...+..+.|+|+ ++.+++++.++ .|.
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~-~~~~~~l~~~~~~~~~~~~~spd-----------------g~l~~~~~~~~~~~l~ 268 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGR-FADTRTLLGGPEEAIAQAEWAPD-----------------GSLIVATDRTGWWNLH 268 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSC-EEEEEEEEEETTBCEEEEEECTT-----------------SCEEEEECTTSSCEEE
T ss_pred CCCCCCCCCCcEEEEEEECCCCc-ccccEEeCCCCCceEcceEECCC-----------------CeEEEEECCCCCeEEE
Confidence 54 378888875 221 01233343 45677888999997 45677888888 555
Q ss_pred EEEccCCeEEEEEEcccCCCC--------eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEE
Q psy2762 202 IWKQEGDKWIEETKLENHSDW--------VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWN 273 (318)
Q Consensus 202 iwd~~~~~~~~~~~~~~h~~~--------V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~ 273 (318)
+||..+++..+. ...+... +..+.|+|+ +.++++++. +.++||.+..... ....+..+...+..
T Consensus 269 ~~~~~~~~~~~l--~~~~~~~~~p~w~~~~~~~~~~~~----~~~~~~~~~-~~~~l~~~d~~~~-~~~~l~~~~~~~~~ 340 (662)
T 3azo_A 269 RVDPATGAATQL--CRREEEFAGPLWTPGMRWFAPLAN----GLIAVVHGK-GAAVLGILDPESG-ELVDAAGPWTEWAA 340 (662)
T ss_dssp EECTTTCCEEES--SCCSSBSSCCCCSTTCCSEEECTT----SCEEEEEBS-SSCEEEEEETTTT-EEEECCSSCCEEEE
T ss_pred EEECCCCceeec--ccccccccCccccccCceEeEeCC----CEEEEEEEc-CccEEEEEECCCC-cEEEecCCCCeEEE
Confidence 566656654322 2233222 567888885 788999988 9999994432111 23445555666776
Q ss_pred E-EEcCCCCEEEEEeCCCeEEEEEECC-CCceEEEe
Q psy2762 274 V-SWSLTGDILTVSCGDNSVSLWKENT-DGAWQCIT 307 (318)
Q Consensus 274 v-~~spdg~~l~s~~~D~~v~iW~~~~-~~~~~~~~ 307 (318)
+ +++++.-.+++++.+...+||..+. +++...+.
T Consensus 341 ~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 341 TLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 6 5554444455666777778887664 44555443
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.65 E-value=3.4e-13 Score=118.96 Aligned_cols=237 Identities=10% Similarity=0.035 Sum_probs=152.8
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC-
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD- 89 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D- 89 (318)
+|...+.+++|+|+|++++++..++.|.+||.+. ++.......+...+.+++|++ +++++++...+
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-----------~~~~~~~~~~~~~~~~i~~~~--dg~l~v~~~~~~ 108 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET-----------KEIKRPFVSHKANPAAIKIHK--DGRLFVCYLGDF 108 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT-----------CCEEEEEECSSSSEEEEEECT--TSCEEEEECTTS
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCC-----------CcEEEEeeCCCCCcceEEECC--CCcEEEEeCCCC
Confidence 4556778999999999888888899999999862 233332335667899999963 47877777666
Q ss_pred ---CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeeccccccc
Q psy2762 90 ---RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIAAHTIGC 162 (318)
Q Consensus 90 ---g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~~h~~~v 162 (318)
+.|.+||..++..........+...++++++.|+ +.++++...+ ....||.+..... ....+..+....
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~ 184 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK--GGFYFTDFRGYSTNPLGGVYYVSPDFR--TVTPIIQNISVA 184 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT--SCEEEEECCCBTTBCCEEEEEECTTSC--CEEEEEEEESSE
T ss_pred CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC--CCEEEEeccccccCCCceEEEEeCCCC--EEEEeecCCCcc
Confidence 6899999887654322221224457899999998 5566654431 2345555533221 122222233345
Q ss_pred ceeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC-C-eEEE-----EEEcccCCCCeeEEEEccCCCC
Q psy2762 163 NAVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG-D-KWIE-----ETKLENHSDWVRDVAWAPSWGL 234 (318)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~-~-~~~~-----~~~~~~h~~~V~~v~~sp~~~~ 234 (318)
..++|+|+ +. .+++.+.++.|++||... + .... ...+.++ ..+..++++++
T Consensus 185 ~~i~~~~d-----------------g~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~--- 243 (333)
T 2dg1_A 185 NGIALSTD-----------------EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSD--- 243 (333)
T ss_dssp EEEEECTT-----------------SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTT---
T ss_pred cceEECCC-----------------CCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCC---
Confidence 67889886 33 345556788999999853 2 2111 1122333 45788999996
Q ss_pred CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCC------cEEEEEEcCCCCEEEEEeCC
Q psy2762 235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD------VVWNVSWSLTGDILTVSCGD 289 (318)
Q Consensus 235 ~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~------~v~~v~~spdg~~l~s~~~D 289 (318)
+.++++...++.|.+|+..... ...+..... .+.+++|+|||+.|+.++.+
T Consensus 244 -G~l~v~~~~~~~v~~~d~~g~~---~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 244 -DNLYVAMYGQGRVLVFNKRGYP---IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp -CCEEEEEETTTEEEEECTTSCE---EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred -CCEEEEEcCCCEEEEECCCCCE---EEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 7778887788999999885421 222222221 58899999998777655554
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=3e-14 Score=138.70 Aligned_cols=252 Identities=8% Similarity=-0.102 Sum_probs=160.6
Q ss_pred CCCcceeeeeeecCCCCEEE-----EeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCe--EEEEecCCCCCcE
Q psy2762 10 TGHEDMIHDAEMDYLGLYLA-----TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV--WQVAWAHPQFGTL 82 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~-----s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V--~~v~~~~~~~~~~ 82 (318)
.+|...+..++|||||++|| +|+.+.+|++||++.+ +.+. ..+...+ ..++|++ ||+.
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg-----------~~~~--~~~~~~~~~~~~~wsp--Dg~~ 181 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG-----------EWSK--VDVIEGGKYATPKWTP--DSKG 181 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC-----------CBCS--SCCBSCCTTCCCEECT--TSSE
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC-----------CCcC--CcccCcccccceEEec--CCCE
Confidence 46777899999999999999 5666789999999743 2110 1122222 5789974 5899
Q ss_pred EEEEECCCe-------------EEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeec
Q psy2762 83 LASCSYDRK-------------VIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMS 145 (318)
Q Consensus 83 las~s~Dg~-------------v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~ 145 (318)
|+.++.|.. |.+|++.++. ...++....+...+..++|+|+ +.+++..+.++ ...+|-...
T Consensus 182 l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 182 FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRD--GKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTT--SCCEEEEEEETTTEEEEEEECT
T ss_pred EEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCC--CCEEEEEEeCCCCceEEEEEcC
Confidence 999999887 9999998764 2344444456667899999999 45555555444 444444322
Q ss_pred CCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec---CCCeEEEEEccCCe---EEEEEEcccC
Q psy2762 146 DTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG---CDNLIKIWKQEGDK---WIEETKLENH 219 (318)
Q Consensus 146 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs---~d~~i~iwd~~~~~---~~~~~~~~~h 219 (318)
... ....+..+...+....| |+ +..++... .++.|.+||+.+++ +... +..+
T Consensus 260 ~~~--~~~~l~~~~~~~~~~~~-~~-----------------g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l--~~~~ 317 (695)
T 2bkl_A 260 GEK--DFRLLVKGVGAKYEVHA-WK-----------------DRFYVLTDEGAPRQRVFEVDPAKPARASWKEI--VPED 317 (695)
T ss_dssp TCS--SCEEEEECSSCCEEEEE-ET-----------------TEEEEEECTTCTTCEEEEEBTTBCSGGGCEEE--ECCC
T ss_pred CCC--ceEEeecCCCceEEEEe-cC-----------------CcEEEEECCCCCCCEEEEEeCCCCCccCCeEE--ecCC
Confidence 221 23445555545555555 33 23333333 35789999987653 2221 2223
Q ss_pred -CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec-CCcEEEEEEcCCCCEEEEE----eCCCeEE
Q psy2762 220 -SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGDILTVS----CGDNSVS 293 (318)
Q Consensus 220 -~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~-~~~v~~v~~spdg~~l~s~----~~D~~v~ 293 (318)
...|..++|+. +.++++...|+..+||....... ....+..+ ...|..++++||++.|+.+ ...++|.
T Consensus 318 ~~~~l~~~~~~~-----~~lv~~~~~dg~~~l~~~~~~g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~ 391 (695)
T 2bkl_A 318 SSASLLSVSIVG-----GHLSLEYLKDATSEVRVATLKGK-PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIY 391 (695)
T ss_dssp SSCEEEEEEEET-----TEEEEEEEETTEEEEEEEETTCC-EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEEEC-----CEEEEEEEECCEEEEEEEeCCCC-eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEE
Confidence 44578888873 67899999999999986542111 12223322 4578889999999887733 3357899
Q ss_pred EEEECCCCceEEEe
Q psy2762 294 LWKENTDGAWQCIT 307 (318)
Q Consensus 294 iW~~~~~~~~~~~~ 307 (318)
+||+.++ +...+.
T Consensus 392 ~~d~~~g-~~~~l~ 404 (695)
T 2bkl_A 392 KTSVSTG-KSELWA 404 (695)
T ss_dssp EEETTTC-CEEEEE
T ss_pred EEECCCC-cEEEEe
Confidence 9997654 444443
No 176
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.62 E-value=2.8e-14 Score=126.03 Aligned_cols=211 Identities=8% Similarity=-0.034 Sum_probs=127.1
Q ss_pred eeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc------ccCeEEEEecCCCCCcEEEEEE
Q psy2762 15 MIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH------SGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 15 ~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~~~~~~~~~las~s 87 (318)
.+..++|+|+|+++ +++..++.|.+||+. +++.+..+..+ ...+.+++|++ +|++|++++
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~-----------t~~~~~~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~~~ 110 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLD-----------TCKNTFHANLSSVPGEVGRSMYSFAISP--DGKEVYATV 110 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETT-----------TTEEEEEEESCCSTTEEEECSSCEEECT--TSSEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCC-----------CCcEEEEEEcccccccccccccceEECC--CCCEEEEEc
Confidence 57889999999865 456678999999986 24555555432 23478899974 588999988
Q ss_pred CC------------CeEEEEeCCCCcEEE-EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762 88 YD------------RKVIIWRGDNGNWFK-YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK 154 (318)
Q Consensus 88 ~D------------g~v~vWd~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~ 154 (318)
.+ +.|.+||+.+++... ...+. +...+.+++|+|+ +.+++ ++ +.|.+||..... ....
T Consensus 111 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d--g~l~~-~~--~~i~~~d~~~~~---~~~~ 181 (349)
T 1jmx_B 111 NPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD--GSLYV-AG--PDIYKMDVKTGK---YTVA 181 (349)
T ss_dssp EEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT--SCEEE-ES--SSEEEECTTTCC---EEEE
T ss_pred ccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC--CcEEE-cc--CcEEEEeCCCCc---eecc
Confidence 66 999999987643211 11222 3446889999999 44444 33 348888764332 1111
Q ss_pred ecccc--c----------------------ccceeeeCCCCC--------------------CCcccccc-------CCC
Q psy2762 155 IAAHT--I----------------------GCNAVSWGPGIG--------------------SLSELDLK-------GSK 183 (318)
Q Consensus 155 ~~~h~--~----------------------~v~~~~~~p~~~--------------------~~~~~~~~-------~~~ 183 (318)
+..+. . ....++++++.. .....+.. ...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (349)
T 1jmx_B 182 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGL 261 (349)
T ss_dssp ECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEE
T ss_pred ccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeE
Confidence 11110 0 011122322110 00000000 000
Q ss_pred CCC-ccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCC
Q psy2762 184 LGG-VAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY 256 (318)
Q Consensus 184 ~~~-~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~ 256 (318)
+.. .+++++++ ++.|++||+.+++...... ....+.+++|+|+ +.+|++++.++.|++||..+.
T Consensus 262 ~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~d----g~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 262 RSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKK----GDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp ECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECSS----SSCEEEESBSSEEEEEETTTT
T ss_pred ecCCCCCEEEEE--cCeEEEEECccCeEEEEEc---CCCCccceEECCC----CCEEEEecCCCeEEEEecccc
Confidence 011 25567776 8899999998886543332 2234779999996 667777888999999998764
No 177
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=1.5e-13 Score=123.38 Aligned_cols=250 Identities=10% Similarity=0.015 Sum_probs=150.0
Q ss_pred eeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc------ccCeEEEEecCCCCCc
Q psy2762 18 DAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH------SGPVWQVAWAHPQFGT 81 (318)
Q Consensus 18 ~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~~~~~~~~ 81 (318)
.++|+|||++|+.++ .|++|.+||.. +.+.+.++... ......+++++ +|+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~-----------t~~~~~~i~~~~~~~~~g~~p~~i~~sp--dg~ 120 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD-----------KLTFEKEISLPPKRVQGLNYDGLFRQTT--DGK 120 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT-----------TCCEEEEEEECTTBCCBCCCGGGEEECT--TSS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc-----------CCcEEEEEEcCccccccCCCcceEEECC--CCC
Confidence 789999999999876 36789999986 23455555432 23456788864 589
Q ss_pred EEEEEEC--CCeEEEEeCCCCcEEEEEE-ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762 82 LLASCSY--DRKVIIWRGDNGNWFKYYE-YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH 158 (318)
Q Consensus 82 ~las~s~--Dg~v~vWd~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h 158 (318)
+|+++.. +++|.+||+.+.+.. .. +.. .....+.+.|+. ...+++.+.||.+.+++.....+ ... ..+
T Consensus 121 ~l~v~n~~~~~~v~v~d~~~~~~~--~~~i~~--~~~~~v~~~p~~-~~~~~~~~~dg~~~~v~~~~~g~---~~~-~~~ 191 (361)
T 2oiz_A 121 FIVLQNASPATSIGIVDVAKGDYV--EDVTAA--AGCWSVIPQPNR-PRSFMTICGDGGLLTINLGEDGK---VAS-QSR 191 (361)
T ss_dssp EEEEEEESSSEEEEEEETTTTEEE--EEEGGG--TTEEEEEECTTS-SSEEEEEETTSSEEEEEECTTSS---EEE-EEE
T ss_pred EEEEECCCCCCeEEEEECCCCcEE--EEEecC--CCcceeEEcCCC-CeeEEEECCCCcEEEEEECCCCc---Eee-ecc
Confidence 9988875 589999999887533 33 332 122335677874 35677888999998888743221 110 011
Q ss_pred ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE--ccc----CC----CCeeEEEE
Q psy2762 159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK--LEN----HS----DWVRDVAW 228 (318)
Q Consensus 159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~--~~~----h~----~~V~~v~~ 228 (318)
.. ..|.+...+..... .+ .+..++..+.++.|.++|+..+....... +.. +. ....-+.|
T Consensus 192 ~~----~~~~~~~~~~~~~~---~~---~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 192 SK----QMFSVKDDPIFIAP---AL---DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp CC----CCSCTTTSCBCSCC---EE---CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred cc----ceEcCCCCceEEEe---cc---cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEE
Confidence 00 11222111100000 00 02345556688999999986543211111 110 11 11123789
Q ss_pred ccCCCCCccEEEEEe----------CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762 229 APSWGLSKCMIASCS----------QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 229 sp~~~~~~~~l~s~s----------~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~ 298 (318)
+|+ .+..+++.+ ...+|.+||+.+.. ....+..+. +++++|+|||++|++++. ++|.+||..
T Consensus 262 ~~d---g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 262 HRA---SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp ETT---TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred ecC---CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 996 233444433 13589999998753 233444444 899999999999998887 999999977
Q ss_pred CCCceEEEee
Q psy2762 299 TDGAWQCITE 308 (318)
Q Consensus 299 ~~~~~~~~~~ 308 (318)
++ +.+.+..
T Consensus 334 t~-~l~~~~~ 342 (361)
T 2oiz_A 334 QP-EPKLLRT 342 (361)
T ss_dssp SS-SCEEEEE
T ss_pred CC-cceeeEE
Confidence 64 3344444
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=6.3e-14 Score=137.42 Aligned_cols=250 Identities=14% Similarity=0.149 Sum_probs=152.5
Q ss_pred ecCCCccee-----eeeeecCCCCEEEEeeCC---------CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEE
Q psy2762 8 VDTGHEDMI-----HDAEMDYLGLYLATCSSD---------HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVA 73 (318)
Q Consensus 8 ~~~gH~~~v-----~~~~~~~~g~~l~s~s~D---------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 73 (318)
+..+|.... ..+.|||||++|+.++.+ +.+.+||+.. ++ +..+..|.+.+...+
T Consensus 51 ~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~-----------~~-~~~l~~~~~~~~~~~ 118 (740)
T 4a5s_A 51 FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK-----------RQ-LITEERIPNNTQWVT 118 (740)
T ss_dssp EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-----------TE-ECCSSCCCTTEEEEE
T ss_pred EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC-----------Cc-EEEcccCCCcceeeE
Confidence 445665432 236779999999998877 4556999873 33 345777888999999
Q ss_pred ecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCe-----------------EEEEeeCCCCCcEEEEeecCC
Q psy2762 74 WAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV-----------------NSIAWAPKEFGLILACGSSDG 136 (318)
Q Consensus 74 ~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v-----------------~~v~~~p~~~~~~lasgs~d~ 136 (318)
|++ ||+.||.++ |+.|.+|++.++...++ +..++...+ ..++|+|| +..||..+.|.
T Consensus 119 ~SP--dG~~la~~~-~~~i~~~~~~~~~~~~l-t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpD--g~~la~~~~d~ 192 (740)
T 4a5s_A 119 WSP--VGHKLAYVW-NNDIYVKIEPNLPSYRI-TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN--GTFLAYAQFND 192 (740)
T ss_dssp ECS--STTCEEEEE-TTEEEEESSTTSCCEEC-CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT--SSEEEEEEEEC
T ss_pred ECC--CCCEEEEEE-CCeEEEEECCCCceEEE-cCCCCccceecCcccccccchhcCCCcceEECCC--CCEEEEEEEcc
Confidence 984 599999984 78999999987754332 223333222 35899999 67777775443
Q ss_pred e------------------------------------EEEEEeec---CCCCcceeeec------ccccccceeeeCCCC
Q psy2762 137 T------------------------------------ISFLTYMS---DTNSWESRKIA------AHTIGCNAVSWGPGI 171 (318)
Q Consensus 137 ~------------------------------------i~i~~~~~---~~~~~~~~~~~------~h~~~v~~~~~~p~~ 171 (318)
. |.+||+.. +.. .....+. +|...+..++|+|+
T Consensus 193 ~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~wspd- 270 (740)
T 4a5s_A 193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN-ATSIQITAPASMLIGDHYLCDVTWATQ- 270 (740)
T ss_dssp TTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC-CCEEEECCCHHHHTSCEEEEEEEEEET-
T ss_pred cCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc-ceEEEecCCccCCCCCeEEEEEEEeCC-
Confidence 2 34444422 110 0111222 24555677888887
Q ss_pred CCCccccccCCCCCCccceEEEe----cCCCeEEEEEccCCe----EEEEEEc--ccCCCCee-----EEEEccCCCCCc
Q psy2762 172 GSLSELDLKGSKLGGVAKRLVSG----GCDNLIKIWKQEGDK----WIEETKL--ENHSDWVR-----DVAWAPSWGLSK 236 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~lasg----s~d~~i~iwd~~~~~----~~~~~~~--~~h~~~V~-----~v~~sp~~~~~~ 236 (318)
++.++.. +.+..|++||..+++ +.....+ ++|..+|. .+.|+|+ |
T Consensus 271 ----------------g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD----G 330 (740)
T 4a5s_A 271 ----------------ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD----G 330 (740)
T ss_dssp ----------------TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT----S
T ss_pred ----------------CeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC----C
Confidence 3433333 334479999988875 2222222 56777766 7899996 6
Q ss_pred cEEE-EEeC-C--CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE-eC----CCeEEEEEECCCC
Q psy2762 237 CMIA-SCSQ-D--RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CG----DNSVSLWKENTDG 301 (318)
Q Consensus 237 ~~l~-s~s~-D--~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~-~~----D~~v~iW~~~~~~ 301 (318)
+.|+ ..+. + ..|.+|+..+... ..+....-.|..+.+ +|++.|+-. .. .+...||.++..|
T Consensus 331 ~~l~~~~s~~~G~~~l~~~~~~~~~~---~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g 400 (740)
T 4a5s_A 331 NSFYKIISNEEGYRHICYFQIDKKDC---TFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLID 400 (740)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCSSC---EESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTE
T ss_pred CEEEEEEEcCCCceEEEEEECCCCce---EecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCC
Confidence 6666 6664 3 4677788776432 233323334544432 446655444 43 3467788877654
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=2.1e-12 Score=110.16 Aligned_cols=238 Identities=9% Similarity=0.007 Sum_probs=156.4
Q ss_pred eeeeeeecCCCCEEE-EeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-cccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762 15 MIHDAEMDYLGLYLA-TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-KGHSGPVWQVAWAHPQFGTLLASCSYDRKV 92 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~-s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~~~~~~~~las~s~Dg~v 92 (318)
...+++++++|++++ +.+.++.|.+||.... . ...+ ..+...+.++++.+ +++++++.. ++.|
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~-----------~-~~~~~~~~~~~p~~i~~~~--~g~l~v~~~-~~~i 89 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGST-----------G-TTVLPFNGLYQPQGLAVDG--AGTVYVTDF-NNRV 89 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----------------EECCCCSCCSCCCEEECT--TCCEEEEET-TTEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCc-----------c-cceEeeCCcCCcceeEECC--CCCEEEEcC-CCEE
Confidence 677899999999888 6578899999986521 1 1111 23335677888863 477666655 8999
Q ss_pred EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCC
Q psy2762 93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG 172 (318)
Q Consensus 93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 172 (318)
.+||...... ..... .....+.++++.|+ +.++++...++.|.+|+. +... ..............++++|+
T Consensus 90 ~~~d~~~~~~-~~~~~-~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~--~~~~-~~~~~~~~~~~p~~i~~~~~-- 160 (270)
T 1rwi_B 90 VTLAAGSNNQ-TVLPF-DGLNYPEGLAVDTQ--GAVYVADRGNNRVVKLAA--GSKT-QTVLPFTGLNDPDGVAVDNS-- 160 (270)
T ss_dssp EEECTTCSCC-EECCC-CSCSSEEEEEECTT--CCEEEEEGGGTEEEEECT--TCCS-CEECCCCSCCSCCCEEECTT--
T ss_pred EEEeCCCceE-eeeec-CCcCCCcceEECCC--CCEEEEECCCCEEEEEEC--CCce-eEeeccccCCCceeEEEeCC--
Confidence 9999876532 21111 22256889999997 567777777788888743 2211 11111122234566777775
Q ss_pred CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762 173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 252 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~ 252 (318)
++.+++...++.|.+||..+..... ....+...+.+|+++|+ |.++++...++.|.+|+
T Consensus 161 ---------------g~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~p~~i~~d~~----g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 161 ---------------GNVYVTDTDNNRVVKLEAESNNQVV--LPFTDITAPWGIAVDEA----GTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp ---------------CCEEEEEGGGTEEEEECTTTCCEEE--CCCSSCCSEEEEEECTT----CCEEEEETTTSCEEEEC
T ss_pred ---------------CCEEEEECCCCEEEEEecCCCceEe--ecccCCCCceEEEECCC----CCEEEEECCCCcEEEEc
Confidence 3556666777899999987654321 12233356889999996 67777777789999999
Q ss_pred cCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
..+.... .........+.+++++|+|+++++...++.|++++...
T Consensus 220 ~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 220 AGSTTST--VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp TTCSCCE--ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCCCcce--eeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 8664321 11112235688999999999888888899999998654
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=2.5e-12 Score=113.37 Aligned_cols=238 Identities=10% Similarity=0.053 Sum_probs=158.5
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV 92 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v 92 (318)
...|.++.|++++..+++.+.++.+++|.- .....+..+...+.+++|++ ++++++++..++.|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~--~g~l~~~~~~~~~i 68 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTITA--------------EPWLEISKKGLQLEGLNFDR--QGQLFLLDVFEGNI 68 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEEC--------------EEEEEEESSCCCEEEEEECT--TSCEEEEETTTCEE
T ss_pred ccccceeeecCCccceeEEeecccCccccc--------------ceeEEEeccCccccCcEECC--CCCEEEEECCCCEE
Confidence 346788999999988888888999999932 34566777777889999973 58888888889999
Q ss_pred EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeec--ccccccceee
Q psy2762 93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIA--AHTIGCNAVS 166 (318)
Q Consensus 93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~ 166 (318)
.+||..+++..... ..+...+.+++++|+ +.++++...+ +.|.+|+..... .. ..+. .+...+..+.
T Consensus 69 ~~~d~~~~~~~~~~--~~~~~~~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~d~~~~~--~~-~~~~~~~~~~~~~~i~ 141 (333)
T 2dg1_A 69 FKINPETKEIKRPF--VSHKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAATENGDN--LQ-DIIEDLSTAYCIDDMV 141 (333)
T ss_dssp EEECTTTCCEEEEE--ECSSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEECTTSCS--CE-EEECSSSSCCCEEEEE
T ss_pred EEEeCCCCcEEEEe--eCCCCCcceEEECCC--CcEEEEeCCCCCCCceEEEEeCCCCE--EE-EEEccCccCCcccceE
Confidence 99999877643322 235678999999998 5667766655 578887753222 11 1111 2334567788
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecC------CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc-EE
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGC------DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MI 239 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~------d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l 239 (318)
++|+ +..+++... .+.|..+|.++++.... ..+...+..++|+|+ +. ++
T Consensus 142 ~d~~-----------------g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~i~~~~d----g~~l~ 197 (333)
T 2dg1_A 142 FDSK-----------------GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI---IQNISVANGIALSTD----EKVLW 197 (333)
T ss_dssp ECTT-----------------SCEEEEECCCBTTBCCEEEEEECTTSCCEEEE---EEEESSEEEEEECTT----SSEEE
T ss_pred ECCC-----------------CCEEEEeccccccCCCceEEEEeCCCCEEEEe---ecCCCcccceEECCC----CCEEE
Confidence 8886 344454443 24566666555443222 122334789999996 55 44
Q ss_pred EEEeCCCeEEEEEcCCC-cceee---EEeeecC--CcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 240 ASCSQDRKVIIWTSNDY-VTWTP---FIMNTFD--DVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 240 ~s~s~D~~i~vw~~~~~-~~~~~---~~~~~~~--~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
++.+.++.|.+|+.... ..... ....... ..+..++++++|+++++...++.|.+|+.
T Consensus 198 v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 198 VTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred EEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 55566889999998532 11110 1111112 36788999999999888888899999985
No 181
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=1.5e-12 Score=127.76 Aligned_cols=247 Identities=13% Similarity=0.008 Sum_probs=151.3
Q ss_pred cCCCcceeeeeeecCCCCEEEEeeCC-----CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLATCSSD-----HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL 83 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l 83 (318)
..+|...+..++|||||++|+.++.+ .+|++||++. ++.+.. ..+...+..++|++ | +.|
T Consensus 158 ~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t-----------g~~~~~-~~~~~~~~~~~wsp--D-~~l 222 (741)
T 1yr2_A 158 AKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVAD-----------GKPLAD-ELKWVKFSGLAWLG--N-DAL 222 (741)
T ss_dssp C----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTT-----------CCEEEE-EEEEEESCCCEEST--T-SEE
T ss_pred ccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCC-----------CCCCCc-cCCCceeccEEEEC--C-CEE
Confidence 34555678899999999999887654 4699999973 233221 11222235788973 5 778
Q ss_pred EEEECCCe--------------EEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-----CeEEEEE
Q psy2762 84 ASCSYDRK--------------VIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-----GTISFLT 142 (318)
Q Consensus 84 as~s~Dg~--------------v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-----~~i~i~~ 142 (318)
+.++.|+. |.+|++.++. ...++....+...+..++|+|+ +.+++..+.+ ..|.+|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~~l~~~d 300 (741)
T 1yr2_A 223 LYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSD--GRWVVITSSEGTDPVNTVHVAR 300 (741)
T ss_dssp EEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT--SCEEEEEEECTTCSCCEEEEEE
T ss_pred EEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCC--CCEEEEEEEccCCCcceEEEEE
Confidence 88777664 8899987654 2334433334446889999999 5566665544 3788888
Q ss_pred eecCCCCcc-eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC----CCeEEEEEccCC--eEEEEEE
Q psy2762 143 YMSDTNSWE-SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC----DNLIKIWKQEGD--KWIEETK 215 (318)
Q Consensus 143 ~~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~----d~~i~iwd~~~~--~~~~~~~ 215 (318)
...+. .. ...+..+........ +|+ +..|+..+. ++.|.+||+.+. ++...
T Consensus 301 ~~~~~--~~~~~~l~~~~~~~~~~~-~~d-----------------g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l-- 358 (741)
T 1yr2_A 301 VTNGK--IGPVTALIPDLKAQWDFV-DGV-----------------GDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTV-- 358 (741)
T ss_dssp EETTE--ECCCEEEECSSSSCEEEE-EEE-----------------TTEEEEEECTTCTTCEEEEEECSSSSCEEEEE--
T ss_pred CCCCC--CcccEEecCCCCceEEEE-ecc-----------------CCEEEEEECCCCCCCEEEEEeCCCCccccEEE--
Confidence 75431 11 233444433333332 243 345555554 445999998763 33322
Q ss_pred cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee-cCCcEEEEEEcCCCCEEEEE----eCCC
Q psy2762 216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVS----CGDN 290 (318)
Q Consensus 216 ~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~-~~~~v~~v~~spdg~~l~s~----~~D~ 290 (318)
+..+...+..++|+. +.++++...|+..+||....... ....+.. ....|..++++||++.|+.+ ...+
T Consensus 359 ~~~~~~~l~~~~~~~-----~~lv~~~~~dg~~~l~~~~~~g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 432 (741)
T 1yr2_A 359 VPESKDNLESVGIAG-----NRLFASYIHDAKSQVLAFDLDGK-PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPA 432 (741)
T ss_dssp ECCCSSEEEEEEEEB-----TEEEEEEEETTEEEEEEEETTSC-EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEE
T ss_pred ecCCCCeEEEEEEEC-----CEEEEEEEECCEEEEEEEeCCCC-ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCC
Confidence 345555577788863 67889999999988886542111 1222322 34678999999999876633 2357
Q ss_pred eEEEEEECCC
Q psy2762 291 SVSLWKENTD 300 (318)
Q Consensus 291 ~v~iW~~~~~ 300 (318)
++.+||+.++
T Consensus 433 ~i~~~d~~tg 442 (741)
T 1yr2_A 433 TVLALDPATA 442 (741)
T ss_dssp EEEEEETTTT
T ss_pred EEEEEECCCC
Confidence 8889986553
No 182
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.54 E-value=7.6e-11 Score=101.60 Aligned_cols=250 Identities=14% Similarity=0.050 Sum_probs=165.4
Q ss_pred CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
..+...+.+++++++|+++++...++.|.+||.. . ......+..+...+.++++.+ ++.++++...+
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~----------~~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~ 77 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G----------KITEYPLPTPDAKVMCLTISS--DGEVWFTENAA 77 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C----------CEEEEECSSTTCCEEEEEECT--TSCEEEEETTT
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C----------CeEEecCCcccCceeeEEECC--CCCEEEeCCCC
Confidence 3456789999999999988877778899999875 2 111122233456788999863 57877777668
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 169 (318)
+.|..||.. +.. ..+.+......+.++++.|+ +.++++...++.|..++. .+. ........+...+..+++.|
T Consensus 78 ~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~d~-~g~--~~~~~~~~~~~~~~~i~~~~ 150 (299)
T 2z2n_A 78 NKIGRITKK-GII-KEYTLPNPDSAPYGITEGPN--GDIWFTEMNGNRIGRITD-DGK--IREYELPNKGSYPSFITLGS 150 (299)
T ss_dssp TEEEEECTT-SCE-EEEECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECT-TCC--EEEEECSSTTCCEEEEEECT
T ss_pred CeEEEECCC-CcE-EEEeCCCcCCCceeeEECCC--CCEEEEecCCceEEEECC-CCC--EEEecCCCCCCCCceEEEcC
Confidence 999999976 332 33333334567899999987 567777666778888765 221 11111112233456677776
Q ss_pred CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762 170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~ 249 (318)
+ +..+++...++.|.+||. +++... ..+..+...+.+++++|+ +.++++...++.|.
T Consensus 151 ~-----------------g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~----g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 151 D-----------------NALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVGITKGND----DALWFVEIIGNKIG 207 (299)
T ss_dssp T-----------------SCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTT----SSEEEEETTTTEEE
T ss_pred C-----------------CCEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEECCC----CCEEEEccCCceEE
Confidence 5 345666666789999998 555432 233444556889999985 66777766788999
Q ss_pred EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
+|+. +.. ............+..++++|+|+++++...++.|..|+. .+....+
T Consensus 208 ~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~--~g~~~~~ 260 (299)
T 2z2n_A 208 RITT-SGE-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS--NNIIEEY 260 (299)
T ss_dssp EECT-TCC-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET--TTEEEEE
T ss_pred EECC-CCc-EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC--CCceEEE
Confidence 9998 332 111112223457899999999997776657789999985 3444433
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.54 E-value=6.8e-12 Score=111.03 Aligned_cols=227 Identities=15% Similarity=0.081 Sum_probs=143.1
Q ss_pred CcceeeeeeecCCCCEEEEee---------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762 12 HEDMIHDAEMDYLGLYLATCS---------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL 82 (318)
Q Consensus 12 H~~~v~~~~~~~~g~~l~s~s---------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~ 82 (318)
.-..+..+++ ||++|+... .++.|.+||++.. .. ..+ ..+..+.|++ +|++
T Consensus 13 ~~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~-----------~~-~~l----~~~~~~~~Sp--Dg~~ 72 (347)
T 2gop_A 13 KFAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNN-----------AR-RFI----ENATMPRISP--DGKK 72 (347)
T ss_dssp CSCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTC-----------CE-EEE----ESCEEEEECT--TSSE
T ss_pred eeEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCC-----------ce-EEc----ccCCCeEECC--CCCE
Confidence 3456778888 999887642 3677889988632 22 223 5688899974 5898
Q ss_pred EEEEECC---Ce--EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----------------------
Q psy2762 83 LASCSYD---RK--VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD---------------------- 135 (318)
Q Consensus 83 las~s~D---g~--v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d---------------------- 135 (318)
||.++.+ +. |.+|++.+++...... +.. +..++|+|+ +..|+.++.+
T Consensus 73 la~~~~~~~~~~~~l~~~~~~~g~~~~l~~---~~~-~~~~~wspd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 73 IAFMRANEEKKVSEIWVADLETLSSKKILE---AKN-IRSLEWNED--SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEE---ESE-EEEEEECTT--SSEEEEEEECCCC---------CCCC------
T ss_pred EEEEEeccCCCcceEEEEECCCCceEEEEc---CCC-ccceeECCC--CCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 9888764 34 6677877765444332 233 899999999 5566665532
Q ss_pred -----CeEEEEEeecCCCCcce-eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC-------eEEE
Q psy2762 136 -----GTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-------LIKI 202 (318)
Q Consensus 136 -----~~i~i~~~~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-------~i~i 202 (318)
..|.+|+...+ +. ..+.. . .+..+.|+|+ + .+++++.+. ..+|
T Consensus 147 ~~~~~~~l~~~d~~~~----~~~~~l~~-~-~~~~~~~spd-----------------g-~~~~~~~~~~~~~~~~~~~l 202 (347)
T 2gop_A 147 FDGEKTTFWIFDTESE----EVIEEFEK-P-RFSSGIWHRD-----------------K-IVVNVPHREIIPQYFKFWDI 202 (347)
T ss_dssp ---CEEEEEEEETTTT----EEEEEEEE-E-TTCEEEEETT-----------------E-EEEEEECCCSSCCSSCCEEE
T ss_pred ccCccceEEEEECCCC----eEEeeecC-C-CcccccCCCC-----------------e-EEEEEecccccccccccccE
Confidence 45666765322 12 33333 3 6788899996 4 555554432 4455
Q ss_pred EEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC--------eEEEEEcCCCcceeeEEeeecCCcEEE-
Q psy2762 203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR--------KVIIWTSNDYVTWTPFIMNTFDDVVWN- 273 (318)
Q Consensus 203 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~--------~i~vw~~~~~~~~~~~~~~~~~~~v~~- 273 (318)
|..++++.... ..+ ..+..+ +|+ |..|+.++.+. .|.+|+ .. . .......+...+..
T Consensus 203 ~~~d~~~~~~l---~~~-~~~~~~--spd----g~~l~~~~~~~~~~~~~~~~l~~~d-~~-~--~~~l~~~~~~~~~~~ 268 (347)
T 2gop_A 203 YIWEDGKEEKM---FEK-VSFYAV--DSD----GERILLYGKPEKKYMSEHNKLYIYD-GK-E--VMGILDEVDRGVGQA 268 (347)
T ss_dssp EEEETTEEEEE---EEE-ESEEEE--EEC----SSCEEEEECCSSSCCCSSCEEEEEC-SS-C--EEESSTTCCSEEEEE
T ss_pred EEeCCCceEEe---ccC-cceeeE--CCC----CCEEEEEEccccCCccccceEEEEC-CC-c--eEeccccCCcccCCc
Confidence 55445543322 223 445444 886 77787777553 677777 22 1 11222344567876
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 274 VSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 274 v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
+.|+ || ++++++.|+.++|| ++ .|+...+
T Consensus 269 ~~~s-dg-~~~~~~~~~~~~l~-~~-~g~~~~~ 297 (347)
T 2gop_A 269 KIKD-GK-VYFTLFEEGSVNLY-IW-DGEIKPI 297 (347)
T ss_dssp EEET-TE-EEEEEEETTEEEEE-EE-SSSEEEE
T ss_pred cEEc-Cc-EEEEEecCCcEEEE-Ec-CCceEEE
Confidence 9999 99 99999999999999 88 5654433
No 184
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.52 E-value=1.5e-11 Score=105.95 Aligned_cols=201 Identities=16% Similarity=0.189 Sum_probs=137.0
Q ss_pred CCcceeeeeee-cCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEE
Q psy2762 11 GHEDMIHDAEM-DYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 11 gH~~~v~~~~~-~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s 87 (318)
+|...+..+++ .++|.++++... ++.|++||.+ ++.+..+. .+...+.++++.+ +++++++..
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~------------g~~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~ 139 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY------------GQFVRKFGATILQHPRGVTVDN--KGRIIVVEC 139 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT------------SCEEEEECTTTCSCEEEEEECT--TSCEEEEET
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC------------CcEEEEecCccCCCceEEEEeC--CCCEEEEEC
Confidence 45567888999 578887777643 8999999853 34455553 3456788999863 588888877
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccccccee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAV 165 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~ 165 (318)
.++.|.+||... +....+....+...+.+|+++|+ +.++++...++.|.+|+.. .. ....+. ++...+..+
T Consensus 140 ~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g~---~~~~~~~~g~~~~p~~i 212 (286)
T 1q7f_A 140 KVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDK--QEIFISDNRAHCVKVFNYE-GQ---YLRQIGGEGITNYPIGV 212 (286)
T ss_dssp TTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSS--SEEEEEEGGGTEEEEEETT-CC---EEEEESCTTTSCSEEEE
T ss_pred CCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCC--CCEEEEECCCCEEEEEcCC-CC---EEEEEccCCccCCCcEE
Confidence 889999999654 43333332244556899999998 6678887888999999852 21 122232 222445678
Q ss_pred eeCCCCCCCccccccCCCCCCccceEEEecCCC-eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~ 244 (318)
+++|+ ++.+++...++ .|++||.... .............+.+++++|+ +.++++ +.
T Consensus 213 ~~d~~-----------------G~l~v~~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~----g~l~vs-~~ 269 (286)
T 1q7f_A 213 GINSN-----------------GEILIADNHNNFNLTIFTQDGQ-LISALESKVKHAQCFDVALMDD----GSVVLA-SK 269 (286)
T ss_dssp EECTT-----------------CCEEEEECSSSCEEEEECTTSC-EEEEEEESSCCSCEEEEEEETT----TEEEEE-ET
T ss_pred EECCC-----------------CCEEEEeCCCCEEEEEECCCCC-EEEEEcccCCCCcceeEEECCC----CcEEEE-CC
Confidence 88875 45677777775 9999997643 3222222222334789999996 777776 67
Q ss_pred CCeEEEEEcCC
Q psy2762 245 DRKVIIWTSND 255 (318)
Q Consensus 245 D~~i~vw~~~~ 255 (318)
|++|++|+...
T Consensus 270 ~~~v~v~~~~~ 280 (286)
T 1q7f_A 270 DYRLYIYRYVQ 280 (286)
T ss_dssp TTEEEEEECSC
T ss_pred CCeEEEEEccc
Confidence 99999998754
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.52 E-value=4.5e-11 Score=103.16 Aligned_cols=231 Identities=11% Similarity=0.060 Sum_probs=152.8
Q ss_pred CCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc
Q psy2762 23 YLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN 101 (318)
Q Consensus 23 ~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~ 101 (318)
..+++|++++.|+.|.+||.+ +++.+-.+..+. ..+.++.+.+ +|++|+ +.++.|..||. +++
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~-----------tG~~~w~~~~~~~~~~~~~~~~p--dG~ilv--s~~~~V~~~d~-~G~ 66 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKD-----------TKEIVWEYPLEKGWECNSVAATK--AGEILF--SYSKGAKMITR-DGR 66 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETT-----------TTEEEEEEECCTTCCCCEEEECT--TSCEEE--ECBSEEEEECT-TSC
T ss_pred CCCcEEEeeCCCCEEEEEECC-----------CCeEEEEeCCCccCCCcCeEECC--CCCEEE--eCCCCEEEECC-CCC
Confidence 356889999999999999985 467787887766 4678888864 588888 45889999998 565
Q ss_pred EEEEEEecCC-CcCeEEEEeeCCCCCcEEEEeec-CCeEEEEEeecCCCCcceeeec------ccccccceeeeCCCCCC
Q psy2762 102 WFKYYEYNNH-DSSVNSIAWAPKEFGLILACGSS-DGTISFLTYMSDTNSWESRKIA------AHTIGCNAVSWGPGIGS 173 (318)
Q Consensus 102 ~~~~~~~~~h-~~~v~~v~~~p~~~~~~lasgs~-d~~i~i~~~~~~~~~~~~~~~~------~h~~~v~~~~~~p~~~~ 173 (318)
.++++..+ ...+.++.+.|+ +.++++.+. ++.|..++. .++ .+..+. .+......++..++
T Consensus 67 --~~W~~~~~~~~~~~~~~~~~d--G~~lv~~~~~~~~v~~vd~-~Gk---~l~~~~~~~~~~~~~~~~~~v~~~~~--- 135 (276)
T 3no2_A 67 --ELWNIAAPAGCEMQTARILPD--GNALVAWCGHPSTILEVNM-KGE---VLSKTEFETGIERPHAQFRQINKNKK--- 135 (276)
T ss_dssp --EEEEEECCTTCEEEEEEECTT--SCEEEEEESTTEEEEEECT-TSC---EEEEEEECCSCSSGGGSCSCCEECTT---
T ss_pred --EEEEEcCCCCccccccEECCC--CCEEEEecCCCCEEEEEeC-CCC---EEEEEeccCCCCcccccccCceECCC---
Confidence 34445443 346888999998 667777665 555544442 121 111111 11112223334443
Q ss_pred CccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc
Q psy2762 174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS 253 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~ 253 (318)
+.++++.+.++.|..||.+ ++..-. +... ..+.++...|+ +..+++++.++.|..+|.
T Consensus 136 --------------G~~lv~~~~~~~v~~~d~~-G~~~w~--~~~~-~~~~~~~~~~~----g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 136 --------------GNYLVPLFATSEVREIAPN-GQLLNS--VKLS-GTPFSSAFLDN----GDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp --------------SCEEEEETTTTEEEEECTT-SCEEEE--EECS-SCCCEEEECTT----SCEEEECBTTSEEEEECT
T ss_pred --------------CCEEEEecCCCEEEEECCC-CCEEEE--EECC-CCccceeEcCC----CCEEEEeCCCCeEEEEeC
Confidence 5789999999999999988 554333 3322 34567778775 778888888889999998
Q ss_pred CCC-cceeeEEe--ee-cCCcEEEEEEcCCCCEEEEEeCC--------CeEEEEEECCCCc
Q psy2762 254 NDY-VTWTPFIM--NT-FDDVVWNVSWSLTGDILTVSCGD--------NSVSLWKENTDGA 302 (318)
Q Consensus 254 ~~~-~~~~~~~~--~~-~~~~v~~v~~spdg~~l~s~~~D--------~~v~iW~~~~~~~ 302 (318)
.+. ..|+.... .+ ....+..+...++|+.+++.... +..++.+++..|+
T Consensus 194 ~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 194 ESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK 254 (276)
T ss_dssp TTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB
T ss_pred cCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCC
Confidence 843 23322110 00 11347889999999999887422 2457888877775
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.50 E-value=7.3e-11 Score=102.76 Aligned_cols=245 Identities=9% Similarity=0.061 Sum_probs=153.8
Q ss_pred ceeeeeeecCCCCEEEE-------eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-----cccccCeEEEEecCCCC-C
Q psy2762 14 DMIHDAEMDYLGLYLAT-------CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-----KGHSGPVWQVAWAHPQF-G 80 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s-------~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-----~~h~~~V~~v~~~~~~~-~ 80 (318)
....+++|+++|.++++ +..++.|.+||... ++.. .+ .++...+.++.+.+ + +
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~-----------g~~~-~~~~~~~~~~~~~~~~i~~~~--~~g 83 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT-----------GKKT-VICKPEVNGYGGIPAGCQCDR--DAN 83 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT-----------CCEE-EEECCEETTEECCEEEEEECS--SSS
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC-----------CcEE-EEEecccCCCCCCCceEEEec--CCC
Confidence 35678999999998888 67889999998752 2221 22 23667789999863 4 5
Q ss_pred cEEEEEECCCeEEEEeCCCCcEEEE-EEec-C-CCcCeEEEEeeCCCCCcEEEEeecCC-------------eEEEEEee
Q psy2762 81 TLLASCSYDRKVIIWRGDNGNWFKY-YEYN-N-HDSSVNSIAWAPKEFGLILACGSSDG-------------TISFLTYM 144 (318)
Q Consensus 81 ~~las~s~Dg~v~vWd~~~~~~~~~-~~~~-~-h~~~v~~v~~~p~~~~~~lasgs~d~-------------~i~i~~~~ 144 (318)
++++ ++.+..|.+||.. ++.... .... . +...+.++++.|+ +.++++...++ ...+|.+.
T Consensus 84 ~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (314)
T 1pjx_A 84 QLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYE--GNLWITAPAGEVAPADYTRSMQEKFGSIYCFT 159 (314)
T ss_dssp EEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTT--SCEEEEECBCBCTTSCCCBTTSSSCEEEEEEC
T ss_pred cEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCC--CCEEEEecCcccccccccccccCCCCeEEEEC
Confidence 5444 4445578899987 653222 1111 1 1235889999998 55666655441 13444442
Q ss_pred cCCCCcceeeecccccccceeeeC----CCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEcc-CCeEE---EEEE
Q psy2762 145 SDTNSWESRKIAAHTIGCNAVSWG----PGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQE-GDKWI---EETK 215 (318)
Q Consensus 145 ~~~~~~~~~~~~~h~~~v~~~~~~----p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~-~~~~~---~~~~ 215 (318)
.. . ....+..+......++|+ |+ ++. +++...++.|++||.+ .++.. ....
T Consensus 160 ~~-g--~~~~~~~~~~~~~~i~~~~~~d~d-----------------g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~ 219 (314)
T 1pjx_A 160 TD-G--QMIQVDTAFQFPNGIAVRHMNDGR-----------------PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH 219 (314)
T ss_dssp TT-S--CEEEEEEEESSEEEEEEEECTTSC-----------------EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred CC-C--CEEEeccCCCCcceEEEecccCCC-----------------CCEEEEEECCCCeEEEEECCCCCccccceEEEE
Confidence 22 1 122222233334667777 75 333 4555678899999976 44321 1233
Q ss_pred cccCC-CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEE-EEeCCCeEE
Q psy2762 216 LENHS-DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILT-VSCGDNSVS 293 (318)
Q Consensus 216 ~~~h~-~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~-s~~~D~~v~ 293 (318)
+.++. ..+..++++++ |.++++...++.|.+|+..+... ......+...+.+++|+|+|+.|. +...++.|.
T Consensus 220 ~~~~~~~~p~~i~~d~~----G~l~v~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~ 293 (314)
T 1pjx_A 220 IPGTHEGGADGMDFDED----NNLLVANWGSSHIEVFGPDGGQP--KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVW 293 (314)
T ss_dssp CCCCSSCEEEEEEEBTT----CCEEEEEETTTEEEEECTTCBSC--SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCCCCCCCceEECCC----CCEEEEEcCCCEEEEEcCCCCcE--eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEE
Confidence 44444 56788999996 77888877889999999873321 122333346789999999999554 445568999
Q ss_pred EEEECCCCc
Q psy2762 294 LWKENTDGA 302 (318)
Q Consensus 294 iW~~~~~~~ 302 (318)
.|+.+..|.
T Consensus 294 ~~~~~~~g~ 302 (314)
T 1pjx_A 294 KFEWQRNGK 302 (314)
T ss_dssp EEECSSCBC
T ss_pred EEeCCCCCc
Confidence 999877653
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.48 E-value=7.3e-11 Score=104.31 Aligned_cols=238 Identities=8% Similarity=0.036 Sum_probs=147.7
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII 94 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v 94 (318)
....+.+. .+++.++...+++|.+||.. +++.+.++. .......+++++ ++.++++...++.|.+
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~-----------t~~~~~~i~-~~~~p~~i~~~~--~g~lyv~~~~~~~v~~ 109 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDIN-----------TFKEVGRIT-GFTSPRYIHFLS--DEKAYVTQIWDYRIFI 109 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETT-----------TCCEEEEEE-CCSSEEEEEEEE--TTEEEEEEBSCSEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECc-----------ccEEEEEcC-CCCCCcEEEEeC--CCeEEEEECCCCeEEE
Confidence 34566663 34555556678999999986 356667764 345678888863 3655555558999999
Q ss_pred EeCCCCcEEEEEEecC---CCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762 95 WRGDNGNWFKYYEYNN---HDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG 170 (318)
Q Consensus 95 Wd~~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 170 (318)
||..+.+......... .......+++ .. +.++++.. .++.|.++|..... ....+.. ......+.++|+
T Consensus 110 iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~--~~lyv~~~~~~~~v~viD~~t~~---~~~~i~~-g~~p~~i~~~~d 182 (328)
T 3dsm_A 110 INPKTYEITGYIECPDMDMESGSTEQMVQ-YG--KYVYVNCWSYQNRILKIDTETDK---VVDELTI-GIQPTSLVMDKY 182 (328)
T ss_dssp EETTTTEEEEEEECTTCCTTTCBCCCEEE-ET--TEEEEEECTTCCEEEEEETTTTE---EEEEEEC-SSCBCCCEECTT
T ss_pred EECCCCeEEEEEEcCCccccCCCcceEEE-EC--CEEEEEcCCCCCEEEEEECCCCe---EEEEEEc-CCCccceEEcCC
Confidence 9998876544333321 0014456777 33 55666654 48899999864332 1122221 122345666765
Q ss_pred CCCCccccccCCCCCCccceEEEecCC----------CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762 171 IGSLSELDLKGSKLGGVAKRLVSGGCD----------NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~lasgs~d----------~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 240 (318)
++.++++..+ +.|.++|..+++......+.. ......++|+|+ +..|.
T Consensus 183 -----------------G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d----~~~ly 240 (328)
T 3dsm_A 183 -----------------NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQLNGT----RDTLY 240 (328)
T ss_dssp -----------------SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEECTT----SCEEE
T ss_pred -----------------CCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEEecC----CCEEE
Confidence 3555555544 789999998876544333321 235789999996 55565
Q ss_pred EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEE----eCCCeEEEEEEC
Q psy2762 241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVS----CGDNSVSLWKEN 298 (318)
Q Consensus 241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~----~~D~~v~iW~~~ 298 (318)
.+.. .|.+||..+..................++++| +|+.+++. ..+++|.+|+.+
T Consensus 241 v~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 241 WINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 5543 89999987643211011111135688999999 56666655 568899999866
No 188
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=2.1e-09 Score=92.53 Aligned_cols=247 Identities=12% Similarity=0.028 Sum_probs=161.7
Q ss_pred CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEE-EEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~~~~~~~~las~s~D 89 (318)
.....+.++.++++|++.++...++.|.+||.. . +.. ..+..+...+.++.+.+ ++.++++...+
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~-----------~~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~ 82 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-G-----------RIKEFEVPTPDAKVMCLIVSS--LGDIWFTENGA 82 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S-----------CEEEEECSSTTCCEEEEEECT--TSCEEEEETTT
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-C-----------ceEEEECCCCCCcceeEEECC--CCCEEEEecCC
Confidence 345678899999999998887778999999875 2 111 22334446788898853 57777776668
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 169 (318)
+.|..+|.. +.. ..+.+......+.++++.++ +.++++...++.|..++.. + ......+......+..+++.|
T Consensus 83 ~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g--~~~~~~~~~~~~~~~~i~~d~ 155 (300)
T 2qc5_A 83 NKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLN--GDIWFTQLNGDRIGKLTAD-G--TIYEYDLPNKGSYPAFITLGS 155 (300)
T ss_dssp TEEEEECTT-SCE-EEEECSSTTCCEEEEEECST--TCEEEEETTTTEEEEECTT-S--CEEEEECSSTTCCEEEEEECT
T ss_pred CeEEEECCC-CCe-EEecCCCCCCCCccceECCC--CCEEEEccCCCeEEEECCC-C--CEEEccCCCCCCCceeEEECC
Confidence 899999987 543 33344434467899999987 5667766667777777642 1 111111112223455666766
Q ss_pred CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762 170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~ 249 (318)
+ ++.+++...++.|..+|. .++... .....+...+..+.++++ +.++++....+.|.
T Consensus 156 ~-----------------g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~----g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 156 D-----------------NALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGND----GALWFVEIMGNKIG 212 (300)
T ss_dssp T-----------------SSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTT----SSEEEEETTTTEEE
T ss_pred C-----------------CCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCC----CCEEEEccCCCEEE
Confidence 4 345556666788999998 444332 334445566899999985 66676666677899
Q ss_pred EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305 (318)
Q Consensus 250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~ 305 (318)
+|+..... ...........+.+++++|+|++.++...++.|..++. .+....
T Consensus 213 ~~~~~g~~--~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~--~g~~~~ 264 (300)
T 2qc5_A 213 RITTTGEI--SEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN--DNTIQE 264 (300)
T ss_dssp EECTTCCE--EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT--TSCEEE
T ss_pred EEcCCCcE--EEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC--CCcEEE
Confidence 99874321 11112223456889999999997776666788988875 455443
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.42 E-value=2e-09 Score=92.62 Aligned_cols=241 Identities=11% Similarity=0.016 Sum_probs=156.5
Q ss_pred CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK 91 (318)
Q Consensus 12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~ 91 (318)
+...+..++++++|.++++...++.|..||.+.. .....+......+.++.+.+ ++.++++...++.
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-----------~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~ 121 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKKGI-----------IKEYTLPNPDSAPYGITEGP--NGDIWFTEMNGNR 121 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-----------EEEEECSSTTCCEEEEEECT--TSCEEEEETTTTE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-----------EEEEeCCCcCCCceeeEECC--CCCEEEEecCCce
Confidence 4467889999999999888777889999986411 11122233455788899863 5787777777889
Q ss_pred EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762 92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI 171 (318)
Q Consensus 92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 171 (318)
|.+||. ++.. .......+...+.++++.|+ +.+.++...++.|..++. .+. ........+...+..+++.|+
T Consensus 122 i~~~d~-~g~~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~-~g~--~~~~~~~~~~~~~~~i~~~~~- 193 (299)
T 2z2n_A 122 IGRITD-DGKI-REYELPNKGSYPSFITLGSD--NALWFTENQNNAIGRITE-SGD--ITEFKIPTPASGPVGITKGND- 193 (299)
T ss_dssp EEEECT-TCCE-EEEECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECT-TCC--EEEEECSSTTCCEEEEEECTT-
T ss_pred EEEECC-CCCE-EEecCCCCCCCCceEEEcCC--CCEEEEeCCCCEEEEEcC-CCc--EEEeeCCCCCCcceeEEECCC-
Confidence 999998 4443 23333334567899999987 566766666778888765 221 111111222334556777765
Q ss_pred CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762 172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw 251 (318)
+..+++...++.|.+||. +++.. ...+..+...+.++.++|+ |.++++...++.|.+|
T Consensus 194 ----------------g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~----g~l~v~~~~~~~i~~~ 251 (299)
T 2z2n_A 194 ----------------DALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGAG----IDLWFTEWGANKIGRL 251 (299)
T ss_dssp ----------------SSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECST----TCEEEEETTTTEEEEE
T ss_pred ----------------CCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECCC----CCEEEeccCCceEEEE
Confidence 345566666789999998 55532 2334455667899999986 6666666678899999
Q ss_pred EcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 252 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
+... . ............+.++++ ++|++.++.. .+.+..++...
T Consensus 252 d~~g-~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 252 TSNN-I-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp ETTT-E-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred CCCC-c-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence 9843 1 111112233457899999 9998877665 45555565443
No 190
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.42 E-value=7.8e-11 Score=104.06 Aligned_cols=211 Identities=13% Similarity=0.093 Sum_probs=138.7
Q ss_pred ccCeEEEEecCCCCCcEEEEEECC------------------------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEee
Q psy2762 66 SGPVWQVAWAHPQFGTLLASCSYD------------------------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121 (318)
Q Consensus 66 ~~~V~~v~~~~~~~~~~las~s~D------------------------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~ 121 (318)
-+.|.++++++ +|+++++...+ ++|.+||..+++..... ..++-..+..|++.
T Consensus 23 l~~v~~va~d~--~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDS--KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS-GKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECT--TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE-CTTTCSSEEEEEEC
T ss_pred cCCceEEEECC--CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc-CCCccCCceEEEEC
Confidence 46789999963 58888888877 47999998877654322 12344578899999
Q ss_pred CCCCCcEEEEeecCCeEEEEEeecCCCCcceeee---------cccccccceeeeCCCCCCCccccccCCCCCCccceEE
Q psy2762 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKI---------AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV 192 (318)
Q Consensus 122 p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la 192 (318)
|+ +.++++...++.|..|+..... ..+..+ ..+......++++|+. +..++
T Consensus 100 ~~--g~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~----------------g~lyv 159 (329)
T 3fvz_A 100 TD--GNYWVTDVALHQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPST----------------GAVFV 159 (329)
T ss_dssp TT--SCEEEEETTTTEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTT----------------CCEEE
T ss_pred CC--CCEEEEECCCCEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCC----------------CeEEE
Confidence 98 6688888888999998752111 011222 1222345678888732 45667
Q ss_pred Eec-CCCeEEEEEccCCeEEEEEEcc--------cCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEE
Q psy2762 193 SGG-CDNLIKIWKQEGDKWIEETKLE--------NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI 263 (318)
Q Consensus 193 sgs-~d~~i~iwd~~~~~~~~~~~~~--------~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~ 263 (318)
+.+ .++.|++|+.+. +........ ++-.....|+++|+ .+.++++...++.|++|+..+... ...
T Consensus 160 ~d~~~~~~I~~~~~~g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~---~g~l~v~d~~~~~I~~~~~~~G~~--~~~ 233 (329)
T 3fvz_A 160 SDGYCNSRIVQFSPSG-KFVTQWGEESSGSSPRPGQFSVPHSLALVPH---LDQLCVADRENGRIQCFKTDTKEF--VRE 233 (329)
T ss_dssp EECSSCCEEEEECTTS-CEEEEECEECCSSSCCTTEESCEEEEEEETT---TTEEEEEETTTTEEEEEETTTCCE--EEE
T ss_pred EeCCCCCeEEEEcCCC-CEEEEeccCCCCCCCCCcccCCCcEEEEECC---CCEEEEEECCCCEEEEEECCCCcE--EEE
Confidence 776 689999999654 332222111 22344789999996 377888888899999999874321 122
Q ss_pred e--eecCCcEEEEEEcC------CCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762 264 M--NTFDDVVWNVSWSL------TGDILTVSCGDNSVSLWKENTDGAWQC 305 (318)
Q Consensus 264 ~--~~~~~~v~~v~~sp------dg~~l~s~~~D~~v~iW~~~~~~~~~~ 305 (318)
+ ..+...+.+++|+| +|+.+++...+.++++|+...+.....
T Consensus 234 ~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 234 IKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp ECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred EeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 2 23456788999999 444444444556999999776644443
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.41 E-value=2e-11 Score=118.76 Aligned_cols=239 Identities=10% Similarity=0.025 Sum_probs=149.5
Q ss_pred cCCCCEEEEeeCCC---cEEEEEcCCCcCCCCCCCCcceEEEE----ecccccCeEEEEecCCCCCcEEE-----EEECC
Q psy2762 22 DYLGLYLATCSSDH---TVKVFNLDRNLKKDDSHSQKGTLIAE----LKGHSGPVWQVAWAHPQFGTLLA-----SCSYD 89 (318)
Q Consensus 22 ~~~g~~l~s~s~D~---~v~vwd~~~~~~~~~~~~~~~~~~~~----~~~h~~~V~~v~~~~~~~~~~la-----s~s~D 89 (318)
+|+|.+++-...++ .-.||-+... ......+.. .++|...+.+++|++ ||++|| +|+.+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~l~d~~~~a~~~~~~~~~~~~SP--DG~~la~~~~~~G~~~ 146 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGE-------SGQEKVLLDPNGWSKDGTVSLGTWAVSW--DGKKVAFAQKPNAADE 146 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEEST-------TSCCEEEECGGGSSSSSCEEEEEEEECT--TSSEEEEEEEETTCSC
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCC-------CCCcEEEEchHHhccCCCEEEEEEEECC--CCCEEEEEECCCCCce
Confidence 48999888776655 3566765311 001122221 124666789999984 589998 55566
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCe--EEEEeeCCCCCcEEEEeecCCe-------------EEEEEeecCCCC-ccee
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSV--NSIAWAPKEFGLILACGSSDGT-------------ISFLTYMSDTNS-WESR 153 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v--~~v~~~p~~~~~~lasgs~d~~-------------i~i~~~~~~~~~-~~~~ 153 (318)
.+|++||+.+++... ..+...+ ..++|+|+ +..|+.++.|.. |.+|++..+... ..+.
T Consensus 147 ~~i~v~dl~tg~~~~----~~~~~~~~~~~~~wspD--g~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~ 220 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSK----VDVIEGGKYATPKWTPD--SKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH 220 (695)
T ss_dssp CEEEEEETTTCCBCS----SCCBSCCTTCCCEECTT--SSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred EEEEEEECCCCCCcC----CcccCcccccceEEecC--CCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence 799999999876320 1122222 67899999 667888888765 889987433211 0111
Q ss_pred eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC----eEEEEEccCCeEEEEEEcccCCCCeeEEEEc
Q psy2762 154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN----LIKIWKQEGDKWIEETKLENHSDWVRDVAWA 229 (318)
Q Consensus 154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~----~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~s 229 (318)
....|...+..+.|+|+ +++|+..+.++ .|++|+..++++.. +..+...+....|
T Consensus 221 ~~~~~~~~~~~~~~SpD-----------------G~~l~~~~~~~~~~~~l~~~~~~~~~~~~---l~~~~~~~~~~~~- 279 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRD-----------------GKYLFVYILRGWSENDVYWKRPGEKDFRL---LVKGVGAKYEVHA- 279 (695)
T ss_dssp CCCCCTTCEEEEEECTT-----------------SCCEEEEEEETTTEEEEEEECTTCSSCEE---EEECSSCCEEEEE-
T ss_pred ecCCCCEEEEEEEECCC-----------------CCEEEEEEeCCCCceEEEEEcCCCCceEE---eecCCCceEEEEe-
Confidence 12234456678899997 46677766655 57777655444322 3345555666666
Q ss_pred cCCCCCccEEEEEe---CCCeEEEEEcCCCcc--eeeEEeeec-CCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 230 PSWGLSKCMIASCS---QDRKVIIWTSNDYVT--WTPFIMNTF-DDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 230 p~~~~~~~~l~s~s---~D~~i~vw~~~~~~~--~~~~~~~~~-~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
|+ +.++++.. .++.|.+|++.+... |. ...... ...|.+++|+ ++.++++...|+..+||..+..|.
T Consensus 280 ~~----g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 280 WK----DRFYVLTDEGAPRQRVFEVDPAKPARASWK-EIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp ET----TEEEEEECTTCTTCEEEEEBTTBCSGGGCE-EEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred cC----CcEEEEECCCCCCCEEEEEeCCCCCccCCe-EEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 43 34555444 258899999866432 22 222222 4568889999 788899999999999998875443
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.40 E-value=5.5e-10 Score=105.86 Aligned_cols=250 Identities=14% Similarity=0.123 Sum_probs=160.2
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC---CCCCcEEEEEECC-C
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH---PQFGTLLASCSYD-R 90 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~---~~~~~~las~s~D-g 90 (318)
.++.+.|+|||++++.++.|+.|.+||+.. .+++.+.++....+ ...++|++ | +|++++.+.+. +
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~---------~t~~~v~~i~~G~~-P~~ia~s~~~~p-DGk~l~v~n~~~~ 266 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWM---------KEPTTVAEIKIGSE-ARSIETSKMEGW-EDKYAIAGAYWPP 266 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTS---------SSCCEEEEEECCSE-EEEEEECCSTTC-TTTEEEEEEEETT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCC---------CCCcEeEEEecCCC-CceeEEccccCC-CCCEEEEEEccCC
Confidence 466899999999999999999999999841 12356666665443 46888873 3 58888777665 9
Q ss_pred eEEEEeCCCCcEEEEEEecC--------CCc-CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762 91 KVIIWRGDNGNWFKYYEYNN--------HDS-SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG 161 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~~~~~~--------h~~-~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~ 161 (318)
+|.|+|..+.+.+......+ |.. .+..+..+++. ..++++...+|.|.++|+.... ......+ .....
T Consensus 267 ~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~-~~~vv~~~~~g~v~~vd~~~~~-~~~v~~i-~~~~~ 343 (567)
T 1qks_A 267 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR-PEFIVNVKETGKILLVDYTDLN-NLKTTEI-SAERF 343 (567)
T ss_dssp EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEETTCSS-EEEEEEE-ECCSS
T ss_pred eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC-CEEEEEecCCCeEEEEecCCCc-cceeeee-ecccc
Confidence 99999988776555443321 222 57788888874 3456666777899988874332 1111122 11222
Q ss_pred cceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCCeEEEEEEc-c--cCCCCeeEEE-EccCCCCCc
Q psy2762 162 CNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGDKWIEETKL-E--NHSDWVRDVA-WAPSWGLSK 236 (318)
Q Consensus 162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~~~~~~~~~-~--~h~~~V~~v~-~sp~~~~~~ 236 (318)
...+.|+|+ +++ +++...+++|.++|..+++....... . -|.. +... ++|+ .+
T Consensus 344 ~~d~~~~pd-----------------gr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg--~g~~~~~p~---~g 401 (567)
T 1qks_A 344 LHDGGLDGS-----------------HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPG--RGANFVHPT---FG 401 (567)
T ss_dssp EEEEEECTT-----------------SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCT--TCEEEEETT---TE
T ss_pred ccCceECCC-----------------CCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCc--cceeeECCC---CC
Confidence 345678886 344 45566788999999998876544433 1 2432 2223 5775 25
Q ss_pred cEEEEEe-CCCeEEEEEcCCCc----cee-eEEeeecCCcEEEEEEcCCCCEEEEEeC-------CCeEEEEEECCC
Q psy2762 237 CMIASCS-QDRKVIIWTSNDYV----TWT-PFIMNTFDDVVWNVSWSLTGDILTVSCG-------DNSVSLWKENTD 300 (318)
Q Consensus 237 ~~l~s~s-~D~~i~vw~~~~~~----~~~-~~~~~~~~~~v~~v~~spdg~~l~s~~~-------D~~v~iW~~~~~ 300 (318)
..+++.. .+++|.+++..... .|. ...+......-..+..+|++++|..... .++|.++|+++.
T Consensus 402 ~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 402 PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 5556554 46899999987621 122 2223222222245789999999988663 359999998754
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.39 E-value=1.7e-10 Score=112.46 Aligned_cols=204 Identities=9% Similarity=-0.022 Sum_probs=130.9
Q ss_pred ccccCeEEEEecCCCCCcEEEEEECCC-----eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe-
Q psy2762 64 GHSGPVWQVAWAHPQFGTLLASCSYDR-----KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT- 137 (318)
Q Consensus 64 ~h~~~V~~v~~~~~~~~~~las~s~Dg-----~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~- 137 (318)
+|...+..++|++ ||++||.++.++ +|++||+.+++.... .+. ...+..++|+|| +..|+.++.++.
T Consensus 122 ~~~~~~~~~~~SP--Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~--~~~~~~~~wspD--g~~l~~~~~~~~~ 194 (710)
T 2xdw_A 122 DGTVALRGYAFSE--DGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLE--RVKFSCMAWTHD--GKGMFYNAYPQQD 194 (710)
T ss_dssp TSCEEEEEEEECT--TSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEE--EECSCCEEECTT--SSEEEEEECCCCS
T ss_pred CCCEEEEEEEECC--CCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-ccc--CcccceEEEEeC--CCEEEEEEECCcc
Confidence 3555688899984 589998776644 899999998865442 222 223678999999 667777777665
Q ss_pred ---------------EEEEEeecCCCCcceeee-c--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC---
Q psy2762 138 ---------------ISFLTYMSDTNSWESRKI-A--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC--- 196 (318)
Q Consensus 138 ---------------i~i~~~~~~~~~~~~~~~-~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~--- 196 (318)
|.+|++..+. .....+ . .|...+..+.|+|+ +++|+..+.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~--~~~~~v~~~~~~~~~~~~~~~SpD-----------------g~~l~~~~~~~~ 255 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQ--SEDILCAEFPDEPKWMGGAELSDD-----------------GRYVLLSIREGC 255 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCG--GGCEEEECCTTCTTCEEEEEECTT-----------------SCEEEEEEECSS
T ss_pred ccccccccccCCCCEEEEEECCCCc--ccceEEeccCCCCeEEEEEEEcCC-----------------CCEEEEEEEccC
Confidence 8888864332 111111 1 23444567889997 456666554
Q ss_pred --CCeEEEEEccC------CeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC----CeEEEEEcCCCcceeeEEe
Q psy2762 197 --DNLIKIWKQEG------DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD----RKVIIWTSNDYVTWTPFIM 264 (318)
Q Consensus 197 --d~~i~iwd~~~------~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D----~~i~vw~~~~~~~~~~~~~ 264 (318)
+..|++||+.+ +.. ....+..+...+.. .|+|+ |..|+..+.+ ..|.+|++.+........+
T Consensus 256 ~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~d----g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 256 DPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNE----GTVFTFKTNRHSPNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp SSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEE----TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE
T ss_pred CCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEecc----CCEEEEEECCCCCCCEEEEEeCCCCCcccceec
Confidence 67899999875 321 12334456555554 48886 5555555543 3699999876431011223
Q ss_pred eecCC--cEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 265 NTFDD--VVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 265 ~~~~~--~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
..+.. .+.+++|++++.+++++..|+..+||-.+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 33333 688899998888999999999777665554
No 194
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.37 E-value=2.9e-10 Score=101.89 Aligned_cols=225 Identities=10% Similarity=0.068 Sum_probs=136.6
Q ss_pred ceeeeeeecCCCCEEEEeeC--CCcEEEEEcCCCcCCCCCCCCcceEEEE-ecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762 14 DMIHDAEMDYLGLYLATCSS--DHTVKVFNLDRNLKKDDSHSQKGTLIAE-LKGHSGPVWQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s~s~--D~~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~~~~~~~~~las~s~Dg 90 (318)
.....++|+|+|++|+.+.. +++|.|||++ +++.+.+ +.. .+. ..+.+.+ .....+++.+.||
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~-----------~~~~~~~~i~~-~~~-~~v~~~p-~~~~~~~~~~~dg 173 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVA-----------KGDYVEDVTAA-AGC-WSVIPQP-NRPRSFMTICGDG 173 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETT-----------TTEEEEEEGGG-TTE-EEEEECT-TSSSEEEEEETTS
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECC-----------CCcEEEEEecC-CCc-ceeEEcC-CCCeeEEEECCCC
Confidence 34667899999999998764 6899999997 3466666 542 221 2244433 3347888999999
Q ss_pred eEEEEeCCC-CcEEEEEE----ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--c------
Q psy2762 91 KVIIWRGDN-GNWFKYYE----YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--A------ 157 (318)
Q Consensus 91 ~v~vWd~~~-~~~~~~~~----~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~------ 157 (318)
.+.+|+... ++...... +.....++ .+.++|+ +..++..+.++.|.++|+..+... ....+. .
T Consensus 174 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~--g~~~~~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~ 249 (361)
T 2oiz_A 174 GLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALD--KDKAHFVSYYGNVYSADFSGDEVK-VDGPWSLLNDEDKAK 249 (361)
T ss_dssp SEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEEC--SSEEEEEBTTSEEEEEECSSSSCE-EEEEEESCCHHHHHT
T ss_pred cEEEEEECCCCcEeeeccccceEcCCCCce-EEEeccc--CCEEEEEeCCCeEEEEEecCCCce-ecccccccCcccccc
Confidence 999998764 43321111 11122222 2334565 334455567888988887433210 000000 0
Q ss_pred --cccccceeeeCCCCCCCccccccCCCCCCccceEEEec----------CCCeEEEEEccCCeEEEEEEcccCCCCeeE
Q psy2762 158 --HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG----------CDNLIKIWKQEGDKWIEETKLENHSDWVRD 225 (318)
Q Consensus 158 --h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs----------~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~ 225 (318)
...+...++++|+. ...+++.+ ..+.|.+||+.+++.. .++..+. +.+
T Consensus 250 ~~~p~g~~~~a~~~dg----------------~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v--~~i~~~~--p~~ 309 (361)
T 2oiz_A 250 NWVPGGYNLVGLHRAS----------------GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV--ARIPGRD--ALS 309 (361)
T ss_dssp TCEECCSSCEEEETTT----------------TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE--EEEECTT--CCE
T ss_pred ccccCCeeEEEEecCC----------------CeEEEEEccCCCcccccCCCceEEEEECCCCcEE--EEEecCC--eeE
Confidence 01112235667752 12233322 1358999999988643 4455565 899
Q ss_pred EEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC
Q psy2762 226 VAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD 281 (318)
Q Consensus 226 v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~ 281 (318)
+.|+|+ |++|++++. ++|.+||..+........+..+....+.++++|||+
T Consensus 310 ia~spd----g~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 310 MTIDQQ----RNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEETT----TTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEECCC----CCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999996 778888876 999999988752112233334456778999999986
No 195
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.37 E-value=2.5e-10 Score=98.88 Aligned_cols=201 Identities=12% Similarity=0.046 Sum_probs=132.9
Q ss_pred EEEecccccCeEEEEecCCCCCc-EEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe
Q psy2762 59 IAELKGHSGPVWQVAWAHPQFGT-LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT 137 (318)
Q Consensus 59 ~~~~~~h~~~V~~v~~~~~~~~~-~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~ 137 (318)
+..+..+.....+++|++ +++ +++++..++.|..|+..++ ... +..+...+.+++++|+ +.++++...++.
T Consensus 20 ~~~l~~~~~~~eg~~~d~--~g~~l~~~~~~~~~i~~~~~~~~--~~~--~~~~~~~~~~l~~~~d--g~l~v~~~~~~~ 91 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVP--ARSAVIFSDVRQNRTWAWSDDGQ--LSP--EMHPSHHQNGHCLNKQ--GHLIACSHGLRR 91 (296)
T ss_dssp CEEEECCCSSEEEEEEEG--GGTEEEEEEGGGTEEEEEETTSC--EEE--EESSCSSEEEEEECTT--CCEEEEETTTTE
T ss_pred EEEEecCCccccCCeEeC--CCCEEEEEeCCCCEEEEEECCCC--eEE--EECCCCCcceeeECCC--CcEEEEecCCCe
Confidence 344556677788999974 476 7888889999999998876 233 3346677999999998 667777666788
Q ss_pred EEEEEeecCCCCcceeeec----c-cccccceeeeCCCCCCCccccccCCCCCCccceEEE----ec-------------
Q psy2762 138 ISFLTYMSDTNSWESRKIA----A-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVS----GG------------- 195 (318)
Q Consensus 138 i~i~~~~~~~~~~~~~~~~----~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~las----gs------------- 195 (318)
|.+|+...+. ...+. . ....++.++++|+ +..+++ |+
T Consensus 92 i~~~d~~~g~----~~~~~~~~~~~~~~~~~~i~~d~~-----------------G~l~vtd~~~g~~~~~~~~~~~~~~ 150 (296)
T 3e5z_A 92 LERQREPGGE----WESIADSFEGKKLNSPNDVCLAPD-----------------GSLWFSDPTYGIDKPEEGYGGEMEL 150 (296)
T ss_dssp EEEECSTTCC----EEEEECEETTEECCCCCCEEECTT-----------------SCEEEEECSHHHHCGGGSSCCCCCS
T ss_pred EEEEcCCCCc----EEEEeeccCCCCCCCCCCEEECCC-----------------CCEEEECCccccccccccccccccC
Confidence 9888763332 11221 1 1124567888876 455665 33
Q ss_pred CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce--eeEEeeecCCcEEE
Q psy2762 196 CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWN 273 (318)
Q Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~--~~~~~~~~~~~v~~ 273 (318)
..+.|..++.. ++. ..+..+....+.++|+|+ +..|++.+.++.|.+|++...... ...........+..
T Consensus 151 ~~~~l~~~~~~-g~~---~~~~~~~~~~~gi~~s~d----g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~ 222 (296)
T 3e5z_A 151 PGRWVFRLAPD-GTL---SAPIRDRVKPNGLAFLPS----GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG 222 (296)
T ss_dssp SSCEEEEECTT-SCE---EEEECCCSSEEEEEECTT----SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS
T ss_pred CCcEEEEECCC-CCE---EEeecCCCCCccEEECCC----CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe
Confidence 13455555554 332 223455566899999996 666787888899999998622111 01112223445678
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762 274 VSWSLTGDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 274 v~~spdg~~l~s~~~D~~v~iW~~~ 298 (318)
++++++|+++++. ++.|.+|+.+
T Consensus 223 i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 223 LRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp EEEBTTSCEEEEE--TTEEEEECTT
T ss_pred EEECCCCCEEEEc--CCeEEEECCC
Confidence 9999999977666 7899999854
No 196
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.36 E-value=8.9e-11 Score=114.24 Aligned_cols=252 Identities=9% Similarity=-0.011 Sum_probs=148.8
Q ss_pred cCCCcceeeeeeecCCCCEEE-----EeeCCCcEEEEEcCCCcCCCCCCCCcceEEE-EecccccCeEEEEecCCCCCcE
Q psy2762 9 DTGHEDMIHDAEMDYLGLYLA-----TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA-ELKGHSGPVWQVAWAHPQFGTL 82 (318)
Q Consensus 9 ~~gH~~~v~~~~~~~~g~~l~-----s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~V~~v~~~~~~~~~~ 82 (318)
..+|...+..++|||||++|| +|+.+.+|+|||+++ ++.+. .+.. .....++|+ + ++.
T Consensus 124 a~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t-----------g~~~~~~~~~--~k~~~~~Ws-D--g~~ 187 (693)
T 3iuj_A 124 SPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES-----------KQPLETPLKD--VKFSGISWL-G--NEG 187 (693)
T ss_dssp STTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT-----------CSEEEEEEEE--EESCCCEEE-T--TTE
T ss_pred cCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC-----------CCCCccccCC--ceeccEEEe-C--CCE
Confidence 456777899999999999988 344446899999973 23222 2221 112467897 4 788
Q ss_pred EEEEECCCe-------------EEEEeCCCCcE--EEEEEecC-CCcCeEEEEeeCCCCCcEE-EEeec---CCeEEEEE
Q psy2762 83 LASCSYDRK-------------VIIWRGDNGNW--FKYYEYNN-HDSSVNSIAWAPKEFGLIL-ACGSS---DGTISFLT 142 (318)
Q Consensus 83 las~s~Dg~-------------v~vWd~~~~~~--~~~~~~~~-h~~~v~~v~~~p~~~~~~l-asgs~---d~~i~i~~ 142 (318)
|+.++.|.. |.+|++.++.. ..++.... |...+..++|+|+ +.++ ++.+. ...|.+++
T Consensus 188 l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~i~~~d 265 (693)
T 3iuj_A 188 FFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTED--DRFLLISAANSTSGNRLYVKD 265 (693)
T ss_dssp EEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTT--SCEEEEEEESSSSCCEEEEEE
T ss_pred EEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCC--CCEEEEEEccCCCCcEEEEEE
Confidence 888888854 99999876532 34444333 4455788999999 4444 33332 24777877
Q ss_pred eecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccCCeEEEEEEcccC
Q psy2762 143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEGDKWIEETKLENH 219 (318)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~~~~~~~~~~~~h 219 (318)
...+.. ....+..+....... |+++. +..++....+ +.|.++++.++.......+..|
T Consensus 266 ~~~~~~--~~~~l~~~~~~~~~~-~~~~g----------------~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 326 (693)
T 3iuj_A 266 LSQENA--PLLTVQGDLDADVSL-VDNKG----------------STLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE 326 (693)
T ss_dssp TTSTTC--CCEEEECSSSSCEEE-EEEET----------------TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC
T ss_pred CCCCCC--ceEEEeCCCCceEEE-EeccC----------------CEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC
Confidence 643321 233444444333332 34331 2333444333 5788888876532111234455
Q ss_pred CCCeeEEEEccCCCCCccEEEEEe-CCC--eEEEEEcCCCcceeeEEe-eecCCcEEEEEEcCCCCEEEEEeCC----Ce
Q psy2762 220 SDWVRDVAWAPSWGLSKCMIASCS-QDR--KVIIWTSNDYVTWTPFIM-NTFDDVVWNVSWSLTGDILTVSCGD----NS 291 (318)
Q Consensus 220 ~~~V~~v~~sp~~~~~~~~l~s~s-~D~--~i~vw~~~~~~~~~~~~~-~~~~~~v~~v~~spdg~~l~s~~~D----~~ 291 (318)
...+. .|+|+ +..|+... .|+ .|++|++.+.. ...+ ......+..++++|+++.|+....+ ++
T Consensus 327 ~~~~~--~~s~~----g~~lv~~~~~~g~~~l~~~d~~g~~---~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~ 397 (693)
T 3iuj_A 327 RQQVL--TVHSG----SGYLFAEYMVDATARVEQFDYEGKR---VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPT 397 (693)
T ss_dssp CSSCE--EEEEE----TTEEEEEEEETTEEEEEEECTTSCE---EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCE
T ss_pred CCCEE--EEEEE----CCEEEEEEEECCeeEEEEEECCCCe---eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCE
Confidence 55554 88886 55555554 454 68888876432 1222 2234568888999998877766544 67
Q ss_pred EEEEEECCCCceEEEe
Q psy2762 292 VSLWKENTDGAWQCIT 307 (318)
Q Consensus 292 v~iW~~~~~~~~~~~~ 307 (318)
+..||+.. ++...+.
T Consensus 398 l~~~d~~~-g~~~~l~ 412 (693)
T 3iuj_A 398 LYRFEPKS-GAISLYR 412 (693)
T ss_dssp EEEECTTT-CCEEEEE
T ss_pred EEEEECCC-CeEEEEE
Confidence 87777544 4454444
No 197
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.34 E-value=3.4e-11 Score=108.39 Aligned_cols=176 Identities=12% Similarity=0.011 Sum_probs=121.0
Q ss_pred CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc---------EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN---------WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138 (318)
Q Consensus 68 ~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~---------~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i 138 (318)
.++.+++++ ...+|++|+.|+. ++|+...-+ ........ +.. |..|+| + +.+++++ .++.|
T Consensus 39 ~~nlLais~--~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d--~~~L~v~-~~~~l 108 (388)
T 1xip_A 39 SLQNLDISN--SKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--H--GDQVLVS-TRNAL 108 (388)
T ss_dssp CCBCEEEET--TTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--E--TTEEEEE-ESSEE
T ss_pred cccEEEEcC--CCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--C--CCEEEEE-cCCcE
Confidence 477788874 3678899998854 459753211 11111222 455 999999 5 5677777 88999
Q ss_pred EEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc
Q psy2762 139 SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN 218 (318)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~ 218 (318)
.+||..... .......|..++..+.+.+. .+|+++.||.|.+||+..+....
T Consensus 109 ~v~dv~sl~---~~~~~~~~~~~v~~i~~~~p-------------------~~av~~~dG~L~v~dl~~~~~~~------ 160 (388)
T 1xip_A 109 YSLDLEELS---EFRTVTSFEKPVFQLKNVNN-------------------TLVILNSVNDLSALDLRTKSTKQ------ 160 (388)
T ss_dssp EEEESSSTT---CEEEEEECSSCEEEEEECSS-------------------EEEEEETTSEEEEEETTTCCEEE------
T ss_pred EEEEchhhh---ccCccceeecceeeEEecCC-------------------CEEEEECCCCEEEEEccCCcccc------
Confidence 999975443 22234456666766665542 38889999999999998765432
Q ss_pred CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe------e---ecCCcEEEEEEcCCCCEEEEEe
Q psy2762 219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM------N---TFDDVVWNVSWSLTGDILTVSC 287 (318)
Q Consensus 219 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~------~---~~~~~v~~v~~spdg~~l~s~~ 287 (318)
+...|+|++|||+ | ++.+..|+++++|+...........+ . .+...|.+|.|.+++++|++-.
T Consensus 161 ~~~~Vs~v~WSpk----G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 161 LAQNVTSFDVTNS----Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEESEEEEEECSS----E--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred ccCCceEEEEcCC----c--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 3456999999996 6 67899999999998765431101122 1 2567899999999999998743
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=3.6e-09 Score=96.38 Aligned_cols=237 Identities=7% Similarity=-0.045 Sum_probs=152.3
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC--eE
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR--KV 92 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg--~v 92 (318)
....++|+++|+++++...++.|++||.+. +.+...... ..... ++|++ +++.|+.+..++ .|
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~-----------g~~~~~~~~-~~~~~-ia~~~--~g~~l~~~d~~~~~~I 196 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDD-----------NKVTTVHPG-FKGGK-PAVTK--DKQRVYSIGWEGTHTV 196 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTT-----------TEEEEEEET-CCBCB-CEECT--TSSEEEEEBSSTTCEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCC-----------CEEEEeecc-CCCCc-eeEec--CCCcEEEEecCCCceE
Confidence 567899999999888888889999999862 333333332 22233 78863 578888888876 78
Q ss_pred EEEeCCCCcEEEEE-EecC-CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-e--eccccccc--cee
Q psy2762 93 IIWRGDNGNWFKYY-EYNN-HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR-K--IAAHTIGC--NAV 165 (318)
Q Consensus 93 ~vWd~~~~~~~~~~-~~~~-h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~-~--~~~h~~~v--~~~ 165 (318)
.+++...+...... .+.. ....+.+++++|++ +.+++ +..++.|..|+..... .... . ..++.... +.+
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~-g~lyv-~d~~~~I~~~d~~~~~--~~~~~~~~~~g~~~~~P~~~i 272 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKIGAVALDETE-EWLYF-VDSNKNFGRFNVKTQE--VTLIKQLELSGSLGTNPGPYL 272 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTS-SEEEE-ECTTCEEEEEETTTCC--EEEEEECCCCSCCCCSSCCEE
T ss_pred EEEEcCCCceeEEeeeccchhcCCcEEEEEeCCC-CeEEE-EECCCcEEEEECCCCC--EEEEecccccCCCCCCccccE
Confidence 88887654321211 1112 34567889999953 55555 5567888888763222 1111 0 11111111 278
Q ss_pred eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC---------------CCCeeEEEEcc
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH---------------SDWVRDVAWAP 230 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h---------------~~~V~~v~~sp 230 (318)
+|+|+. +..+++-..++.|+.|+.+.. ... +.++ -.....++++|
T Consensus 273 a~~p~~----------------g~lyv~d~~~~~I~~~~~~g~-~~~---~~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 273 IYYFVD----------------SNFYMSDQNLSSVYKITPDGE-CEW---FCGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp EEETTT----------------TEEEEEETTTTEEEEECTTCC-EEE---EEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred EEeCCC----------------CEEEEEeCCCCEEEEEecCCC-EEE---EEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 888842 355677778889999987654 211 1222 13478999999
Q ss_pred CCCCCccEEEEEe-CCCeEEEEEcCCCcceeeEEeeec---------------CCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762 231 SWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMNTF---------------DDVVWNVSWSLTGDILTVSCGDNSVSL 294 (318)
Q Consensus 231 ~~~~~~~~l~s~s-~D~~i~vw~~~~~~~~~~~~~~~~---------------~~~v~~v~~spdg~~l~s~~~D~~v~i 294 (318)
+ |.++++-+ .++.|+.|+..+.. ...+.+. -.....++++|+|+++++-..++.||.
T Consensus 333 d----G~lyvad~~~~~~I~~~~~~~G~---v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 333 D----GNFYIVDGFKGYCLRKLDILDGY---VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp T----CCEEEEETTTTCEEEEEETTTTE---EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred C----CCEEEEeCCCCCEEEEEECCCCE---EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
Confidence 6 67777777 88999999954432 1222222 135889999999988888788888887
Q ss_pred EEE
Q psy2762 295 WKE 297 (318)
Q Consensus 295 W~~ 297 (318)
+.+
T Consensus 406 i~~ 408 (409)
T 3hrp_A 406 YAV 408 (409)
T ss_dssp EEE
T ss_pred EEe
Confidence 765
No 199
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.31 E-value=1.5e-08 Score=87.89 Aligned_cols=235 Identities=11% Similarity=0.064 Sum_probs=147.5
Q ss_pred CCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 10 TGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
..+-.--....|+++ +.++++...++.|..||.... .. ..+ .+...+.++++.+ +|+++++ .
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~-----------~~-~~~-~~~~~~~~i~~~~--dG~l~v~-~- 71 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK-----------QV-QRV-TMDAPVSSVALRQ--SGGYVAT-I- 71 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTC-----------CE-EEE-ECSSCEEEEEEBT--TSSEEEE-E-
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCC-----------cE-EEE-eCCCceEEEEECC--CCCEEEE-E-
Confidence 334446678889985 556777778899999998632 22 222 2456789999964 4775554 3
Q ss_pred CCeEEEEeCCCCcEEEEEEecC--CCcCeEEEEeeCCCCCcEEEEeecC---------CeEEEEEeecCCCCcceeeecc
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNN--HDSSVNSIAWAPKEFGLILACGSSD---------GTISFLTYMSDTNSWESRKIAA 157 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d---------~~i~i~~~~~~~~~~~~~~~~~ 157 (318)
++.|.+||..+++......... ....++.+++.|+ +.++++...+ ....+|.+.... ....+..
T Consensus 72 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d--G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---~~~~~~~ 146 (297)
T 3g4e_A 72 GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA--GRYFAGTMAEETAPAVLERHQGALYSLFPDH---HVKKYFD 146 (297)
T ss_dssp TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT--SCEEEEEEECCSBTTBCCTTCEEEEEECTTS---CEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC--CCEEEecCCcccccccccCCCcEEEEEECCC---CEEEEee
Confidence 6789999988776444333221 2245789999998 5555543221 334666664332 1222233
Q ss_pred cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEc--cCCeEE---EEEEcccCCCCeeEEEEccCC
Q psy2762 158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ--EGDKWI---EETKLENHSDWVRDVAWAPSW 232 (318)
Q Consensus 158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~--~~~~~~---~~~~~~~h~~~V~~v~~sp~~ 232 (318)
+....+.++|+|+. ...+++.+.++.|.+|++ .++... ....+..+......+++.++
T Consensus 147 ~~~~pngi~~spdg----------------~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~- 209 (297)
T 3g4e_A 147 QVDISNGLDWSLDH----------------KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE- 209 (297)
T ss_dssp EESBEEEEEECTTS----------------CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT-
T ss_pred ccccccceEEcCCC----------------CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC-
Confidence 33345678999873 123466677889999987 344322 12233344456788999986
Q ss_pred CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc-CCCCEEEEEeC
Q psy2762 233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS-LTGDILTVSCG 288 (318)
Q Consensus 233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s-pdg~~l~s~~~ 288 (318)
|.+.++...++.|.+|+..+... ...+......+.+++|. ||++.|..++.
T Consensus 210 ---G~lwva~~~~~~v~~~d~~tG~~--~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 210 ---GKLWVACYNGGRVIRLDPVTGKR--LQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp ---SCEEEEEETTTEEEEECTTTCCE--EEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred ---CCEEEEEcCCCEEEEEcCCCceE--EEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 77788877888999999874331 22333344678999998 89887665543
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.30 E-value=2.4e-10 Score=98.59 Aligned_cols=186 Identities=17% Similarity=0.122 Sum_probs=128.0
Q ss_pred CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCC-cCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762 80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHD-SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH 158 (318)
Q Consensus 80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h 158 (318)
+++|++++.|+.|.+||.++++. .+++..+. ..+.++++.|+ +.+++ +.++.|..+|. .++. +..+..+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~~~~~~pd--G~ilv--s~~~~V~~~d~-~G~~---~W~~~~~ 74 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEI--VWEYPLEKGWECNSVAATKA--GEILF--SYSKGAKMITR-DGRE---LWNIAAP 74 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEE--EEEEECCTTCCCCEEEECTT--SCEEE--ECBSEEEEECT-TSCE---EEEEECC
T ss_pred CcEEEeeCCCCEEEEEECCCCeE--EEEeCCCccCCCcCeEECCC--CCEEE--eCCCCEEEECC-CCCE---EEEEcCC
Confidence 78999999999999999988874 45555554 46889999998 66777 34677888775 3332 2233322
Q ss_pred -ccccceeeeCCCCCCCccccccCCCCCCccceEEEecC-CCeEEEEEccCCeEEEEEEcc----cCCCCeeEEEEccCC
Q psy2762 159 -TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLE----NHSDWVRDVAWAPSW 232 (318)
Q Consensus 159 -~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~~i~iwd~~~~~~~~~~~~~----~h~~~V~~v~~sp~~ 232 (318)
...+..+.+.|+ ++.+++.+. ++.|..+|.+. +......+. ++....+.+++.++
T Consensus 75 ~~~~~~~~~~~~d-----------------G~~lv~~~~~~~~v~~vd~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~- 135 (276)
T 3no2_A 75 AGCEMQTARILPD-----------------GNALVAWCGHPSTILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKK- 135 (276)
T ss_dssp TTCEEEEEEECTT-----------------SCEEEEEESTTEEEEEECTTS-CEEEEEEECCSCSSGGGSCSCCEECTT-
T ss_pred CCccccccEECCC-----------------CCEEEEecCCCCEEEEEeCCC-CEEEEEeccCCCCcccccccCceECCC-
Confidence 234556667775 467777776 77787787644 333333322 22234566777775
Q ss_pred CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
|.+|++...++.|..||.+....|+. .....+.++.+.|+|+.|++++.++.|..+|..++.
T Consensus 136 ---G~~lv~~~~~~~v~~~d~~G~~~w~~----~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 136 ---GNYLVPLFATSEVREIAPNGQLLNSV----KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp ---SCEEEEETTTTEEEEECTTSCEEEEE----ECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred ---CCEEEEecCCCEEEEECCCCCEEEEE----ECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 88999999999999999875433322 223456788999999999988888889888866554
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.30 E-value=5.5e-11 Score=107.00 Aligned_cols=183 Identities=12% Similarity=0.033 Sum_probs=125.5
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII 94 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v 94 (318)
.++.+++++...++++|+.| .++||++++-..........-..... ..+.. |+.++| +++.|+.+ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f----d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF----HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE----ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE----CCCEEEEE-cCCcEEE
Confidence 68899999999999999987 56679875211000000000011111 23566 999999 37889888 8899999
Q ss_pred EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCC
Q psy2762 95 WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL 174 (318)
Q Consensus 95 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 174 (318)
||+.+-.... ....|...+.++.+.+. . +++++.||.|.+|++.... .. .+...|.+++|+|+
T Consensus 111 ~dv~sl~~~~--~~~~~~~~v~~i~~~~p--~--~av~~~dG~L~v~dl~~~~----~~---~~~~~Vs~v~WSpk---- 173 (388)
T 1xip_A 111 LDLEELSEFR--TVTSFEKPVFQLKNVNN--T--LVILNSVNDLSALDLRTKS----TK---QLAQNVTSFDVTNS---- 173 (388)
T ss_dssp EESSSTTCEE--EEEECSSCEEEEEECSS--E--EEEEETTSEEEEEETTTCC----EE---EEEESEEEEEECSS----
T ss_pred EEchhhhccC--ccceeecceeeEEecCC--C--EEEEECCCCEEEEEccCCc----cc---cccCCceEEEEcCC----
Confidence 9987543222 23456677888877764 2 7788999999999974332 11 24567999999996
Q ss_pred ccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc------c---cCCCCeeEEEEccCCCCCccEEEE
Q psy2762 175 SELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL------E---NHSDWVRDVAWAPSWGLSKCMIAS 241 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~------~---~h~~~V~~v~~sp~~~~~~~~l~s 241 (318)
+ ++.|..||++++|+....+.....++ . +|...|.+|+|.++ +.+|++
T Consensus 174 -------------G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~----~~flv~ 230 (388)
T 1xip_A 174 -------------Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP----QDFLAV 230 (388)
T ss_dssp -------------E--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS----SEEEEE
T ss_pred -------------c--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC----CeEEEE
Confidence 4 68899999999999887653112233 2 47788999999985 566665
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.29 E-value=1.1e-08 Score=96.89 Aligned_cols=246 Identities=14% Similarity=0.061 Sum_probs=154.5
Q ss_pred ecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCC--
Q psy2762 21 MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD-- 98 (318)
Q Consensus 21 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~-- 98 (318)
.+|.+.++++...+++|.|+|.. +++++.++... ..+..+.|++ +|++|++++.|+.|.+||+.
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~-----------t~~v~~~i~~g-~~p~~v~~Sp--DGr~lyv~~~dg~V~viD~~~~ 228 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGS-----------TYEIKTVLDTG-YAVHISRLSA--SGRYLFVIGRDGKVNMIDLWMK 228 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETT-----------TCCEEEEEECS-SCEEEEEECT--TSCEEEEEETTSEEEEEETTSS
T ss_pred cCCCceEEEEeCCCCeEEEEECC-----------CCeEEEEEeCC-CCccceEECC--CCCEEEEEcCCCeEEEEECCCC
Confidence 34556778888899999999986 34667776533 3466889974 59999999999999999985
Q ss_pred CCcEEEEEEecCCCcCeEEEEee----CCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc----------ccc-ccc
Q psy2762 99 NGNWFKYYEYNNHDSSVNSIAWA----PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA----------HTI-GCN 163 (318)
Q Consensus 99 ~~~~~~~~~~~~h~~~v~~v~~~----p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~----------h~~-~v~ 163 (318)
+.+.+. ++.. ......++|+ |++ ..++++...+++|.++|..... .+..+.. |.. .+.
T Consensus 229 t~~~v~--~i~~-G~~P~~ia~s~~~~pDG-k~l~v~n~~~~~v~ViD~~t~~---~~~~i~~~~~~~~~~~~~p~~rva 301 (567)
T 1qks_A 229 EPTTVA--EIKI-GSEARSIETSKMEGWED-KYAIAGAYWPPQYVIMDGETLE---PKKIQSTRGMTYDEQEYHPEPRVA 301 (567)
T ss_dssp SCCEEE--EEEC-CSEEEEEEECCSTTCTT-TEEEEEEEETTEEEEEETTTCC---EEEEEECCEECTTTCCEESCCCEE
T ss_pred CCcEeE--EEec-CCCCceeEEccccCCCC-CEEEEEEccCCeEEEEECCCCc---EEEEEeccccccccccccCCCceE
Confidence 554333 3433 2346789999 573 2444555556899999853322 1222221 111 234
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE-
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC- 242 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~- 242 (318)
.+..+++. ..+++...++|.|.++|....+......+ .......++.|+|+ +++|.++
T Consensus 302 ~i~~s~~~----------------~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pd----gr~~~va~ 360 (567)
T 1qks_A 302 AILASHYR----------------PEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGS----HRYFITAA 360 (567)
T ss_dssp EEEECSSS----------------SEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTT----SCEEEEEE
T ss_pred EEEEcCCC----------------CEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCC----CCEEEEEe
Confidence 44455431 24567778889999999765432222232 23345778999996 6665544
Q ss_pred eCCCeEEEEEcCCCcceeeEEee-----ecCCcEEEEEEcCCCCEE-EEEe-CCCeEEEEEECCCCc----eEEEeeecc
Q psy2762 243 SQDRKVIIWTSNDYVTWTPFIMN-----TFDDVVWNVSWSLTGDIL-TVSC-GDNSVSLWKENTDGA----WQCITEMGK 311 (318)
Q Consensus 243 s~D~~i~vw~~~~~~~~~~~~~~-----~~~~~v~~v~~spdg~~l-~s~~-~D~~v~iW~~~~~~~----~~~~~~~~~ 311 (318)
..+.+|.++|..+... ..... .|...-..+ ++|++..+ +++. .+++|.+++.+..++ |+.++.+..
T Consensus 361 ~~sn~V~ViD~~t~kl--~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 361 NARNKLVVIDTKEGKL--VAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp GGGTEEEEEETTTTEE--EEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CCCCeEEEEECCCCcE--EEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec
Confidence 4688999999987531 11121 232211122 68885444 4443 578999999887443 877777654
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.26 E-value=3.6e-08 Score=84.68 Aligned_cols=237 Identities=9% Similarity=0.048 Sum_probs=150.4
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV 92 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v 92 (318)
...+..++++++|+++++...++.|.+||.. . ......+......+.++++.+ ++.++++...++.|
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g----------~~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i 127 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G----------GFTEYPLPQPDSGPYGITEGL--NGDIWFTQLNGDRI 127 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-S----------CEEEEECSSTTCCEEEEEECS--TTCEEEEETTTTEE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-C----------CeEEecCCCCCCCCccceECC--CCCEEEEccCCCeE
Confidence 4578889999999988887778889999875 2 111122333446688898863 57777776668899
Q ss_pred EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCC
Q psy2762 93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG 172 (318)
Q Consensus 93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 172 (318)
..+|.. ++.. .+.+......+.++++.|+ +.+.++...++.|..++. .+. ........+...+..+.+.++
T Consensus 128 ~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~i~~~~~-~g~--~~~~~~~~~~~~~~~i~~d~~-- 198 (300)
T 2qc5_A 128 GKLTAD-GTIY-EYDLPNKGSYPAFITLGSD--NALWFTENQNNSIGRITN-TGK--LEEYPLPTNAAAPVGITSGND-- 198 (300)
T ss_dssp EEECTT-SCEE-EEECSSTTCCEEEEEECTT--SSEEEEETTTTEEEEECT-TCC--EEEEECSSTTCCEEEEEECTT--
T ss_pred EEECCC-CCEE-EccCCCCCCCceeEEECCC--CCEEEEecCCCeEEEECC-CCc--EEEeeCCCCCCCcceEEECCC--
Confidence 999987 5432 3334434567889999987 556666665777777764 221 111111122234556666664
Q ss_pred CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762 173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 252 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~ 252 (318)
+..+++....+.|.+|+. .++.. ...+..+...+.++.++++ +.++++...++.|..|+
T Consensus 199 ---------------g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~----g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 199 ---------------GALWFVEIMGNKIGRITT-TGEIS-EYDIPTPNARPHAITAGKN----SEIWFTEWGANQIGRIT 257 (300)
T ss_dssp ---------------SSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECST----TCEEEEETTTTEEEEEC
T ss_pred ---------------CCEEEEccCCCEEEEEcC-CCcEE-EEECCCCCCCceEEEECCC----CCEEEeccCCCeEEEEC
Confidence 345555556678999998 44432 2334445566899999986 66666666678999998
Q ss_pred cCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762 253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296 (318)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~ 296 (318)
.... .....+......+.+++++|+|++.++.. . .|..++
T Consensus 258 ~~g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 258 NDNT--IQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp TTSC--EEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred CCCc--EEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 8432 11112222335678999999998776554 3 555444
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.25 E-value=1.9e-08 Score=90.52 Aligned_cols=244 Identities=12% Similarity=-0.004 Sum_probs=139.3
Q ss_pred eeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-------ccCeEEEEecCCCCC
Q psy2762 18 DAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-------SGPVWQVAWAHPQFG 80 (318)
Q Consensus 18 ~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-------~~~V~~v~~~~~~~~ 80 (318)
.++|+|||++|+.+. .+++|.+||... .+.+.++..- ...-..+.|++ +|
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t-----------~~~~~~i~~~~~~~~~~g~~p~~~~~sp--DG 136 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT-----------FLPIADIELPDAPRFDVGPYSWMNANTP--NN 136 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC-----------CcEEEEEECCCccccccCCCccceEECC--CC
Confidence 799999999988875 368899999862 3344443211 12234678864 58
Q ss_pred cEEEEEEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee--eec
Q psy2762 81 TLLASCSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR--KIA 156 (318)
Q Consensus 81 ~~las~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~--~~~ 156 (318)
++|+.+.. +..|.++| .+++.... .+.. . .++.+.|+. ...+++.+.|+.+.+++. ..+...... ...
T Consensus 137 ~~l~v~n~~~~~~v~viD-~t~~~~~~-~i~~-~---~~~~~~~~~-~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~ 208 (373)
T 2mad_H 137 ADLLFFQFAAGPAVGLVV-QGGSSDDQ-LLSS-P---TCYHIHPGA-PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAML 208 (373)
T ss_pred CEEEEEecCCCCeEEEEE-CCCCEEeE-EcCC-C---ceEEEEeCC-CceEEEEcCCCCEEEEEC-CCcEEEEEeccccc
Confidence 99998875 57899999 88764333 0221 1 135566664 345666778898888886 332110000 000
Q ss_pred cccccc-ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC----------CCCeeE
Q psy2762 157 AHTIGC-NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH----------SDWVRD 225 (318)
Q Consensus 157 ~h~~~v-~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h----------~~~V~~ 225 (318)
....++ ....+.++. +..++. +..+.+.+.|+..+.......++-. ......
T Consensus 209 ~~~~p~~~~~~~~~~~----------------~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 271 (373)
T 2mad_H 209 TAAQNLLTQPAQANKS----------------GRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQ 271 (373)
T ss_pred cCCcceeecceeEecC----------------CEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEe
Confidence 000010 011122211 122333 3667899998865432111111110 112334
Q ss_pred EEEccCCCCCccEEEEEeC----------CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEe-CCCeEE
Q psy2762 226 VAWAPSWGLSKCMIASCSQ----------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVS 293 (318)
Q Consensus 226 v~~sp~~~~~~~~l~s~s~----------D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~-~D~~v~ 293 (318)
+.++|+ +..+..+.. ++.|.+.|..+... ...+ ......+.++|+|||+ .|+++. .+++|.
T Consensus 272 ~~~s~d----~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 272 VAYLKS----SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred EEECCC----CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEE-ECCCCcCeEEECCCCCeEEEEEcCCCCeEE
Confidence 677886 444444332 35799999876431 1222 2344688999999999 777777 589999
Q ss_pred EEEECCCCceEEE
Q psy2762 294 LWKENTDGAWQCI 306 (318)
Q Consensus 294 iW~~~~~~~~~~~ 306 (318)
++|..+....+.+
T Consensus 345 ViD~~t~~vv~~i 357 (373)
T 2mad_H 345 IYDAGAGDQDQST 357 (373)
T ss_pred EEECCCCCEEeee
Confidence 9998776555443
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.23 E-value=7.4e-08 Score=84.80 Aligned_cols=226 Identities=10% Similarity=-0.048 Sum_probs=139.0
Q ss_pred eeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762 15 MIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 15 ~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
....+.|+|+ +.++++...++.|.+||.+. +. ...+. +...+.++.|++ +++++++. .+ .|.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~-----------~~-~~~~~-~~~~v~~i~~~~--dg~l~v~~-~~-gl~ 112 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLAS-----------GR-KTVHA-LPFMGSALAKIS--DSKQLIAS-DD-GLF 112 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTT-----------TE-EEEEE-CSSCEEEEEEEE--TTEEEEEE-TT-EEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCC-----------Cc-EEEEE-CCCcceEEEEeC--CCeEEEEE-CC-CEE
Confidence 4567889997 45666777789999999862 22 22222 346789999974 47766654 44 488
Q ss_pred EEeCCCCcEEEEEEecC--CCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762 94 IWRGDNGNWFKYYEYNN--HDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~ 167 (318)
+||..+++......... ....++++++.|+ +.++++...+ ....||.+. . . ....+..+....+.++|
T Consensus 113 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~--G~l~v~~~~~~~~~~~~~l~~~~-~-g--~~~~~~~~~~~~~~i~~ 186 (326)
T 2ghs_A 113 LRDTATGVLTLHAELESDLPGNRSNDGRMHPS--GALWIGTMGRKAETGAGSIYHVA-K-G--KVTKLFADISIPNSICF 186 (326)
T ss_dssp EEETTTCCEEEEECSSTTCTTEEEEEEEECTT--SCEEEEEEETTCCTTCEEEEEEE-T-T--EEEEEEEEESSEEEEEE
T ss_pred EEECCCCcEEEEeeCCCCCCCCCCCCEEECCC--CCEEEEeCCCcCCCCceEEEEEe-C-C--cEEEeeCCCcccCCeEE
Confidence 99988776433322211 1235889999998 5555543321 234566554 2 1 22223223334567889
Q ss_pred CCCCCCCccccccCCCCCCccceE-EEecCCCeEEEEEcc--CC-eE---EEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRL-VSGGCDNLIKIWKQE--GD-KW---IEETKLENHSDWVRDVAWAPSWGLSKCMIA 240 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~l-asgs~d~~i~iwd~~--~~-~~---~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 240 (318)
+|+ ++.| ++.+.++.|.+|+.+ ++ +. .....+.........+.+.++ |.+++
T Consensus 187 s~d-----------------g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~----G~lwv 245 (326)
T 2ghs_A 187 SPD-----------------GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE----GHIWN 245 (326)
T ss_dssp CTT-----------------SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT----SCEEE
T ss_pred cCC-----------------CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCC----CCEEE
Confidence 986 3333 555667899999975 44 21 112233334455778999885 67777
Q ss_pred EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc-CCCCEEEEEe
Q psy2762 241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS-LTGDILTVSC 287 (318)
Q Consensus 241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s-pdg~~l~s~~ 287 (318)
+...++.|.+|+..... ...+......+.+++|+ ||++.|+.++
T Consensus 246 a~~~~~~v~~~d~~g~~---~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 246 ARWGEGAVDRYDTDGNH---IARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEETTTEEEEECTTCCE---EEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEeCCCEEEEECCCCCE---EEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 76667889999884321 22233334569999998 9988775554
No 206
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.22 E-value=1.2e-08 Score=88.82 Aligned_cols=234 Identities=13% Similarity=0.039 Sum_probs=140.8
Q ss_pred cceeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762 13 EDMIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK 91 (318)
Q Consensus 13 ~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~ 91 (318)
-.......|+|+|+ ++++...++.|..|+.. . . ...+..+...+..+.+.+ +|+++++...++.
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g-----------~-~~~~~~~~~~~~gl~~d~--dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G-----------T-VDVLLDATAFTNGNAVDA--QQRLVHCEHGRRA 108 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-S-----------C-EEEEEESCSCEEEEEECT--TSCEEEEETTTTE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-C-----------C-EEEEeCCCCccceeeECC--CCCEEEEECCCCE
Confidence 44667899999998 67777788999999864 1 2 234555667789999863 5786666555688
Q ss_pred EEEEeCCCCcEEEEEE-ecCC-CcCeEEEEeeCCCCCcEEEE----eecC-----------CeEEEEEeecCCCCcceee
Q psy2762 92 VIIWRGDNGNWFKYYE-YNNH-DSSVNSIAWAPKEFGLILAC----GSSD-----------GTISFLTYMSDTNSWESRK 154 (318)
Q Consensus 92 v~vWd~~~~~~~~~~~-~~~h-~~~v~~v~~~p~~~~~~las----gs~d-----------~~i~i~~~~~~~~~~~~~~ 154 (318)
|.+|+.. ++...... ..+. ...++.+++.|+ +.+.++ |..+ +.-.||.+...... ...
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~d--G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~--~~~ 183 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARD--GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP--LQR 183 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTT--SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC--CEE
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCC--CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc--EEE
Confidence 9999976 44322211 1111 134678999998 666665 3321 12334444322221 122
Q ss_pred ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC------CeEEEEEccCCeEEEEEEc-ccCCCCeeEEE
Q psy2762 155 IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD------NLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227 (318)
Q Consensus 155 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d------~~i~iwd~~~~~~~~~~~~-~~h~~~V~~v~ 227 (318)
+. .....+.++|+|+ ++.|+.+... +.|++|++..+.......+ .........++
T Consensus 184 ~~-~~~~p~gl~~spd-----------------g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~ 245 (305)
T 3dr2_A 184 MA-DLDHPNGLAFSPD-----------------EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFC 245 (305)
T ss_dssp EE-EESSEEEEEECTT-----------------SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEE
T ss_pred Ee-cCCCCcceEEcCC-----------------CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEE
Confidence 22 2334567889987 3445555443 6899999876532111111 11233456788
Q ss_pred EccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL 294 (318)
Q Consensus 228 ~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~i 294 (318)
++++ |.+.++. .++ |.+|+..... ...+. ....+.+++|+|+++.|..++.++..++
T Consensus 246 ~d~~----G~lwv~~-~~g-v~~~~~~g~~---~~~~~-~~~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 246 VDRG----GWLWSSS-GTG-VCVFDSDGQL---LGHIP-TPGTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp ECTT----SCEEECC-SSE-EEEECTTSCE---EEEEE-CSSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred ECCC----CCEEEec-CCc-EEEECCCCCE---EEEEE-CCCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 8886 6655444 454 9999885432 22222 2235889999999999888887654433
No 207
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=2.9e-09 Score=94.52 Aligned_cols=241 Identities=10% Similarity=0.011 Sum_probs=143.4
Q ss_pred ceeeeeeecCCCCEEEEee--CCCcEEEEEcCCCcCCCCCCCCcceEE------EEecccccCeEEEEecCCCCCcEEEE
Q psy2762 14 DMIHDAEMDYLGLYLATCS--SDHTVKVFNLDRNLKKDDSHSQKGTLI------AELKGHSGPVWQVAWAHPQFGTLLAS 85 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s~s--~D~~v~vwd~~~~~~~~~~~~~~~~~~------~~~~~h~~~V~~v~~~~~~~~~~las 85 (318)
..+..++++|+|+++++.. .++.++||.+.. +++. ....+|...+.++++.+ +++++++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~-----------g~~~~~p~~~~~~~~~~~~p~gv~~d~--~g~L~v~ 83 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ-----------DGLIPFPPQSGNAIITFDTVLGIKSDG--NGIVWML 83 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET-----------TEEEESCCCCSSCCCCCSCEEEEEECS--SSEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECC-----------CCeecCCCcccCcccceeEeeEEEEcC--CCcEEEE
Confidence 5788999999999999864 234467776641 1211 01124567899999963 4665555
Q ss_pred EEC-----CCeEEEEeCCCCcEEEEEEecC----CCcCeEEEEeeCCCCCcEEEEee---cCCeEEEEEeecCCCCccee
Q psy2762 86 CSY-----DRKVIIWRGDNGNWFKYYEYNN----HDSSVNSIAWAPKEFGLILACGS---SDGTISFLTYMSDTNSWESR 153 (318)
Q Consensus 86 ~s~-----Dg~v~vWd~~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~~lasgs---~d~~i~i~~~~~~~~~~~~~ 153 (318)
-.. +..|.+||+.+++....+.+.. +...++.+++.|+. +.++++.. .++.|.+|+...+. ..+
T Consensus 84 D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~-g~~yvtd~~~~~~~~i~v~d~~~g~---~~r 159 (343)
T 2qe8_A 84 DNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIH-NFVYISDPAPDDKAALIRVDLQTGL---AAR 159 (343)
T ss_dssp ECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTT-TEEEEEECCSGGGCEEEEEETTTCC---EEE
T ss_pred cCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCC-CEEEEEcCccCCCCeEEEEECCCCC---EEE
Confidence 433 5799999998877555555431 23456899999863 45666655 67889999864332 111
Q ss_pred eecccc-----------------------------cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC-eEEEE
Q psy2762 154 KIAAHT-----------------------------IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-LIKIW 203 (318)
Q Consensus 154 ~~~~h~-----------------------------~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-~i~iw 203 (318)
.+.+|. ..++.++|+|+ ++.|+.+..++ .|..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d-----------------g~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 160 VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE-----------------NEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT-----------------SCEEEEEESSCSEEEEE
T ss_pred EecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC-----------------CCEEEEEeCCCCeEEEE
Confidence 111111 12344555554 34555555544 44444
Q ss_pred Ecc---CCeE-----EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee--ecCCcEEE
Q psy2762 204 KQE---GDKW-----IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWN 273 (318)
Q Consensus 204 d~~---~~~~-----~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~--~~~~~v~~ 273 (318)
+.. .+.. .......++......++++++ |.++++...++.|.+|+..+.. ...+. .....+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~----G~l~va~~~~~~V~~~d~~~G~---~~~~~~~~~~~~p~~ 295 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD----HNIYVGDLAHSAIGVITSADRA---YKLLVTDEKLSWTDS 295 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT----CCEEEEEGGGTEEEEEETTTTE---EEEEEECGGGSCEEE
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECCC----CCEEEEccCCCeEEEEECCCCC---EEEEEECCceecCCe
Confidence 422 1000 000011133334667899986 7888888889999999983322 11221 12356889
Q ss_pred EEEcCCCCEEEEEeCCCeEEEE
Q psy2762 274 VSWSLTGDILTVSCGDNSVSLW 295 (318)
Q Consensus 274 v~~spdg~~l~s~~~D~~v~iW 295 (318)
++|.|+|+++++.+..+.+.+|
T Consensus 296 va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 296 FNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EEECTTSCEEEEECCGGGSGGG
T ss_pred eEECCCCcEEEEeCcccccccc
Confidence 9999999988888765544333
No 208
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.19 E-value=1.3e-08 Score=89.80 Aligned_cols=217 Identities=11% Similarity=-0.035 Sum_probs=136.0
Q ss_pred CCCcEEEEEcCCCcCCCCCCCCcceEEEEec------ccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEE
Q psy2762 33 SDHTVKVFNLDRNLKKDDSHSQKGTLIAELK------GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYY 106 (318)
Q Consensus 33 ~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~------~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~ 106 (318)
.+++|.++|.+. ++....+. ........+.+. .++++++...+++|.+||..+++.+...
T Consensus 15 ~~~~l~~~d~~t-----------~~~~~~i~~~~n~~~lg~~~~~i~~~---~~~lyv~~~~~~~v~viD~~t~~~~~~i 80 (328)
T 3dsm_A 15 SNATLSYYDPAT-----------CEVENEVFYRANGFKLGDVAQSMVIR---DGIGWIVVNNSHVIFAIDINTFKEVGRI 80 (328)
T ss_dssp CCBEEEEEETTT-----------TEEECSHHHHHHSSCCBSCEEEEEEE---TTEEEEEEGGGTEEEEEETTTCCEEEEE
T ss_pred CCceEEEEECCC-----------CEEhhhhHhhhcCcccCccceEEEEE---CCEEEEEEcCCCEEEEEECcccEEEEEc
Confidence 489999999863 34433321 112345677763 2566677777899999999988754433
Q ss_pred EecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc-----cccceeeeCCCCCCCccccccC
Q psy2762 107 EYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT-----IGCNAVSWGPGIGSLSELDLKG 181 (318)
Q Consensus 107 ~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~p~~~~~~~~~~~~ 181 (318)
. .......++++|+ +.++++...++.|.++|..... ....+.... .....+++ .+
T Consensus 81 --~-~~~~p~~i~~~~~--g~lyv~~~~~~~v~~iD~~t~~---~~~~i~~g~~~~~~~~p~~i~~-~~----------- 140 (328)
T 3dsm_A 81 --T-GFTSPRYIHFLSD--EKAYVTQIWDYRIFIINPKTYE---ITGYIECPDMDMESGSTEQMVQ-YG----------- 140 (328)
T ss_dssp --E-CCSSEEEEEEEET--TEEEEEEBSCSEEEEEETTTTE---EEEEEECTTCCTTTCBCCCEEE-ET-----------
T ss_pred --C-CCCCCcEEEEeCC--CeEEEEECCCCeEEEEECCCCe---EEEEEEcCCccccCCCcceEEE-EC-----------
Confidence 3 2456889999887 5666665578999999864322 111222111 02223333 11
Q ss_pred CCCCCccceEEEec-CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC----------CeEEE
Q psy2762 182 SKLGGVAKRLVSGG-CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD----------RKVII 250 (318)
Q Consensus 182 ~~~~~~~~~lasgs-~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D----------~~i~v 250 (318)
+..+++.. .++.|.++|..+++....... ......+.++|+ |.+++++..+ +.|.+
T Consensus 141 ------~~lyv~~~~~~~~v~viD~~t~~~~~~i~~---g~~p~~i~~~~d----G~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 141 ------KYVYVNCWSYQNRILKIDTETDKVVDELTI---GIQPTSLVMDKY----NKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp ------TEEEEEECTTCCEEEEEETTTTEEEEEEEC---SSCBCCCEECTT----SEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred ------CEEEEEcCCCCCEEEEEECCCCeEEEEEEc---CCCccceEEcCC----CCEEEEECCCccCCccccCCceEEE
Confidence 23344443 488999999988865443332 123568899996 6777766554 78999
Q ss_pred EEcCCCcceeeEEee-ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 251 WTSNDYVTWTPFIMN-TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 251 w~~~~~~~~~~~~~~-~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
+|..+... ..... ........++|+||++.|..+.. +|.+||..++
T Consensus 208 id~~t~~v--~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~ 254 (328)
T 3dsm_A 208 IDAETFTV--EKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEAD 254 (328)
T ss_dssp EETTTTEE--EEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCS
T ss_pred EECCCCeE--EEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCC
Confidence 99876431 11121 11236789999999999887755 7888886553
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.19 E-value=3.3e-09 Score=103.90 Aligned_cols=242 Identities=13% Similarity=0.063 Sum_probs=141.8
Q ss_pred cCCCCEEEEeeCCCc---EEEEEcCCCcCCCCCCCCcceEEEE----ecccccCeEEEEecCCCCCcEEEEEECC-----
Q psy2762 22 DYLGLYLATCSSDHT---VKVFNLDRNLKKDDSHSQKGTLIAE----LKGHSGPVWQVAWAHPQFGTLLASCSYD----- 89 (318)
Q Consensus 22 ~~~g~~l~s~s~D~~---v~vwd~~~~~~~~~~~~~~~~~~~~----~~~h~~~V~~v~~~~~~~~~~las~s~D----- 89 (318)
+|+|++++-...++. -.||.+..... .......+.. -++|...+..++|++ ||++||.++.+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~lld~~~l~~~~~~~~~~~~~SP--DG~~la~~~~~~G~e~ 188 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAP----VGTKGRVLLDPNTWAKDGATALDAWAASD--DGRLLAYSVQDGGSDW 188 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSC----TTCCCEEEECGGGCC----EEEEEEEECT--TSSEEEEEEEETTCSE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCcc----CCCCCEEEECHHHhccCCCEEEEeEEECC--CCCEEEEEEcCCCCce
Confidence 489999887665554 67776641100 0001122111 123445688899984 58998887664
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe--------------EEEEEeecCCCCcceeee
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT--------------ISFLTYMSDTNSWESRKI 155 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~--------------i~i~~~~~~~~~~~~~~~ 155 (318)
.+|++||+.+++.... .+ +...+..++|+|+ . .|+.++.++. |.+|+...+. .....+
T Consensus 189 ~~i~v~dl~tg~~~~~-~~--~~~~~~~~~wspD-~--~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~--~~~~lv 260 (741)
T 1yr2_A 189 RTVKFVGVADGKPLAD-EL--KWVKFSGLAWLGN-D--ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQ--SADQPV 260 (741)
T ss_dssp EEEEEEETTTCCEEEE-EE--EEEESCCCEESTT-S--EEEEEECCCC--------CCCCCEEEEEETTSCG--GGCEEE
T ss_pred EEEEEEECCCCCCCCc-cC--CCceeccEEEECC-C--EEEEEEecCcccccccccCCCCCEEEEEECCCCc--hhCEEE
Confidence 4699999998875332 11 1222357899998 3 3444454443 6677653221 111112
Q ss_pred c---ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEE
Q psy2762 156 A---AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVA 227 (318)
Q Consensus 156 ~---~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~ 227 (318)
. .+...+..+.|+|+ +++|+..+.+ ..|++||+.++.......+..+...+....
T Consensus 261 ~~~~~~~~~~~~~~~SpD-----------------G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ 323 (741)
T 1yr2_A 261 FATPELPKRGHGASVSSD-----------------GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV 323 (741)
T ss_dssp ECCTTCTTCEEEEEECTT-----------------SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE
T ss_pred eccCCCCeEEEEEEECCC-----------------CCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE
Confidence 1 23234667889997 4667766644 389999988762110123334444454443
Q ss_pred EccCCCCCccEEEEEeCC----CeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 228 WAPSWGLSKCMIASCSQD----RKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 228 ~sp~~~~~~~~l~s~s~D----~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
+|+ +..|+..+.+ ..|.+|++.+.. .+. .....+...+.+++|+ ++.++++...|+..+||..+..|
T Consensus 324 -~~d----g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 324 -DGV----GDQLWFVSGDGAPLKKIVRVDLSGSTPRFD-TVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp -EEE----TTEEEEEECTTCTTCEEEEEECSSSSCEEE-EEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS
T ss_pred -ecc----CCEEEEEECCCCCCCEEEEEeCCCCccccE-EEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 465 6667766654 459999987631 222 2334445567788888 67788888999999999887544
No 210
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.18 E-value=3e-09 Score=90.37 Aligned_cols=199 Identities=10% Similarity=-0.042 Sum_probs=131.4
Q ss_pred CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s~Dg 90 (318)
+...+.+++++++|+++++.. ++.|.+||.+.. ....+. .....+.++++.+ +++++++...++
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~------------~~~~~~~~~~~~p~~i~~~~--~g~l~v~~~~~~ 129 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN------------NQTVLPFDGLNYPEGLAVDT--QGAVYVADRGNN 129 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS------------CCEECCCCSCSSEEEEEECT--TCCEEEEEGGGT
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc------------eEeeeecCCcCCCcceEECC--CCCEEEEECCCC
Confidence 345678899999999777766 889999987522 112222 2235688999863 578777777789
Q ss_pred eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762 91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG 170 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 170 (318)
.|.+|+..+..... ........+.++++.|+ +.++++...++.|.+|+..... .......+...+..++++|+
T Consensus 130 ~i~~~~~~~~~~~~--~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~d~~ 202 (270)
T 1rwi_B 130 RVVKLAAGSKTQTV--LPFTGLNDPDGVAVDNS--GNVYVTDTDNNRVVKLEAESNN---QVVLPFTDITAPWGIAVDEA 202 (270)
T ss_dssp EEEEECTTCCSCEE--CCCCSCCSCCCEEECTT--CCEEEEEGGGTEEEEECTTTCC---EEECCCSSCCSEEEEEECTT
T ss_pred EEEEEECCCceeEe--eccccCCCceeEEEeCC--CCEEEEECCCCEEEEEecCCCc---eEeecccCCCCceEEEECCC
Confidence 99999765443211 11222345788999997 5577776677888888753221 11111122234566777775
Q ss_pred CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762 171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v 250 (318)
+..+++...++.|++|+..+.... .....+...+.+++++|+ |.++++.+.++.|++
T Consensus 203 -----------------g~l~v~~~~~~~v~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~----g~l~v~~~~~~~v~~ 259 (270)
T 1rwi_B 203 -----------------GTVYVTEHNTNQVVKLLAGSTTST--VLPFTGLNTPLAVAVDSD----RTVYVADRGNDRVVK 259 (270)
T ss_dssp -----------------CCEEEEETTTSCEEEECTTCSCCE--ECCCCSCSCEEEEEECTT----CCEEEEEGGGTEEEE
T ss_pred -----------------CCEEEEECCCCcEEEEcCCCCcce--eeccCCCCCceeEEECCC----CCEEEEECCCCEEEE
Confidence 355666677889999998765321 112233356899999996 678888889999999
Q ss_pred EEcCC
Q psy2762 251 WTSND 255 (318)
Q Consensus 251 w~~~~ 255 (318)
++...
T Consensus 260 ~~~~~ 264 (270)
T 1rwi_B 260 LTSLE 264 (270)
T ss_dssp ECCCG
T ss_pred EcCCC
Confidence 98765
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=3.4e-08 Score=88.59 Aligned_cols=247 Identities=11% Similarity=0.090 Sum_probs=143.0
Q ss_pred eeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-------cCeEEEEecCCCCCc
Q psy2762 19 AEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-------GPVWQVAWAHPQFGT 81 (318)
Q Consensus 19 ~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-------~~V~~v~~~~~~~~~ 81 (318)
++++|||++|+.++ .+++|.+||.. +.+++.++.... ..-..+.|++ ||+
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~-----------t~~v~~~I~v~~g~r~~~g~~P~~~a~sp--DGk 149 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV-----------TLLPTADIELPDAPRFLVGTYPWMTSLTP--DGK 149 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-----------TCCEEEEEEETTCCCCCBSCCGGGEEECT--TSS
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECC-----------CCeEEEEEECCCccccccCCCCceEEEcC--CCC
Confidence 99999999887765 36789999986 345566554211 1234578864 589
Q ss_pred EEEEEEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762 82 LLASCSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159 (318)
Q Consensus 82 ~las~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~ 159 (318)
+|+.+.. ++.|.++|..+.+.+....+.+ |..+.|.. ...+++.+.||.+.+.+.....+. ......+.
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~vv~tI~v~g------~~~~~P~g-~~~~~~~~~DG~~~~v~~~~~g~v--~~~~~~~~ 220 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD------CYHIFPTA-PDTFFMHCRDGSLAKVAFGTEGTP--EITHTEVF 220 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEECCS------EEEEEEEE-TTEEEEEETTSCEEEEECCSSSCC--EEEECCCC
T ss_pred EEEEEEcCCCCeEEEEECCCCcEEEEEECCC------cceeecCC-CceeEEECCCCCEEEEECCCCCeE--EEeeccee
Confidence 8888864 6899999999887555444322 12233432 345667778888877776432111 10000000
Q ss_pred ----cccc-eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc---------c-CCCCee
Q psy2762 160 ----IGCN-AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE---------N-HSDWVR 224 (318)
Q Consensus 160 ----~~v~-~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~---------~-h~~~V~ 224 (318)
.++. ..+|.+ ..++ ++-.+.++.|++.|+.++.......+. + ......
T Consensus 221 ~~~~~~~~~~~~~~~----------------~dG~-~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q 283 (386)
T 3sjl_D 221 HPEDEFLINHPAYSQ----------------KAGR-LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ 283 (386)
T ss_dssp SCTTSCBCSCCEEET----------------TTTE-EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS
T ss_pred ccccccccccceeEc----------------CCCc-EEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcc
Confidence 0000 011111 1133 333556789999998765321111111 0 112233
Q ss_pred EEEEccCCCCCccEEEEEeC---------CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEe-CCCeEE
Q psy2762 225 DVAWAPSWGLSKCMIASCSQ---------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVS 293 (318)
Q Consensus 225 ~v~~sp~~~~~~~~l~s~s~---------D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~-~D~~v~ 293 (318)
.+.++|+ .+++.++-.. ...|.+.|..+... ...+ .....+++++++|||+ +|.++. .+++|.
T Consensus 284 ~~a~~~~---~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv--~~~i-~vg~~~~~lavs~D~~~~ly~tn~~~~~Vs 357 (386)
T 3sjl_D 284 QVAYHRA---LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER--LAKF-EMGHEIDSINVSQDEKPLLYALSTGDKTLY 357 (386)
T ss_dssp CEEEETT---TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEE-EEEEEECEEEECSSSSCEEEEEETTTTEEE
T ss_pred eeeECCC---CCeEEEEeccccccccCCCCCEEEEEECCCCeE--EEEE-ECCCCcceEEECCCCCeEEEEEcCCCCeEE
Confidence 4677886 2334443321 25688888877542 1111 1234789999999997 676665 489999
Q ss_pred EEEECCCCceEEEeeec
Q psy2762 294 LWKENTDGAWQCITEMG 310 (318)
Q Consensus 294 iW~~~~~~~~~~~~~~~ 310 (318)
++|..++...+.+...+
T Consensus 358 ViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 358 IHDAESGEELRSVNQLG 374 (386)
T ss_dssp EEETTTCCEEEEECCCC
T ss_pred EEECCCCcEEEEecCCC
Confidence 99988876666665544
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.03 E-value=5.7e-07 Score=81.78 Aligned_cols=205 Identities=12% Similarity=-0.036 Sum_probs=128.8
Q ss_pred cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEee
Q psy2762 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYM 144 (318)
Q Consensus 67 ~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~ 144 (318)
.....++|++ +++++++...++.|++||..++...... .. ..... ++|+|+ +..+..+..++ .|.+++..
T Consensus 131 ~~P~~la~d~--~g~lyv~d~~~~~I~~id~~~g~~~~~~--~~-~~~~~-ia~~~~--g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVG--NNTVLAYQRDDPRVRLISVDDNKVTTVH--PG-FKGGK-PAVTKD--KQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECS--TTEEEEEETTTTEEEEEETTTTEEEEEE--ET-CCBCB-CEECTT--SSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeC--CCCEEEEecCCCcEEEEECCCCEEEEee--cc-CCCCc-eeEecC--CCcEEEEecCCCceEEEEEcC
Confidence 3577899863 5787777777899999999876543322 22 22233 899998 45565666554 66666643
Q ss_pred cCCCCcceeee---cc-cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE--ccc
Q psy2762 145 SDTNSWESRKI---AA-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK--LEN 218 (318)
Q Consensus 145 ~~~~~~~~~~~---~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~--~~~ 218 (318)
... ....+ .. ....+..++++|+. + .|..+..++.|+.||..++....... ..+
T Consensus 203 ~~~---~~~~~g~~~~~~~~~p~~iav~p~~----------------g-~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g 262 (409)
T 3hrp_A 203 SGW---APTRIGQLGSTFSGKIGAVALDETE----------------E-WLYFVDSNKNFGRFNVKTQEVTLIKQLELSG 262 (409)
T ss_dssp GTT---CEEEEEECCTTSCSCCCBCEECTTS----------------S-EEEEECTTCEEEEEETTTCCEEEEEECCCCS
T ss_pred CCc---eeEEeeeccchhcCCcEEEEEeCCC----------------C-eEEEEECCCcEEEEECCCCCEEEEecccccC
Confidence 221 11122 11 33456778888842 2 34446668899999988765322211 223
Q ss_pred CCCCe-e-EEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec---------------CCcEEEEEEcCCCC
Q psy2762 219 HSDWV-R-DVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF---------------DDVVWNVSWSLTGD 281 (318)
Q Consensus 219 h~~~V-~-~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~---------------~~~v~~v~~spdg~ 281 (318)
+...- . .++|+|+ ++.++++-...+.|+.|+..... ..+.+. -.....++|+|+|+
T Consensus 263 ~~~~~P~~~ia~~p~---~g~lyv~d~~~~~I~~~~~~g~~----~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 263 SLGTNPGPYLIYYFV---DSNFYMSDQNLSSVYKITPDGEC----EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp CCCCSSCCEEEEETT---TTEEEEEETTTTEEEEECTTCCE----EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred CCCCCccccEEEeCC---CCEEEEEeCCCCEEEEEecCCCE----EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 33222 3 9999995 36777777788999999876531 112121 13478999999999
Q ss_pred EEEEEe-CCCeEEEEEECCCCceEEEe
Q psy2762 282 ILTVSC-GDNSVSLWKENTDGAWQCIT 307 (318)
Q Consensus 282 ~l~s~~-~D~~v~iW~~~~~~~~~~~~ 307 (318)
++++-. .++.|+.|+.. .|...++.
T Consensus 336 lyvad~~~~~~I~~~~~~-~G~v~~~~ 361 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDIL-DGYVSTVA 361 (409)
T ss_dssp EEEEETTTTCEEEEEETT-TTEEEEEE
T ss_pred EEEEeCCCCCEEEEEECC-CCEEEEEe
Confidence 887777 78899999854 35554443
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.02 E-value=1.3e-07 Score=86.15 Aligned_cols=245 Identities=11% Similarity=0.081 Sum_probs=141.4
Q ss_pred eeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-------ccCeEEEEecCCCCC
Q psy2762 18 DAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-------SGPVWQVAWAHPQFG 80 (318)
Q Consensus 18 ~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-------~~~V~~v~~~~~~~~ 80 (318)
.++++|||++|+.+. .++.|.++|.. +.+++.++..- ...-..+.|++ +|
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~-----------t~~vv~~I~v~g~~r~~~g~~P~~~~~sp--DG 188 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV-----------TFLPIADIELPDAPRFLVGTYQWMNALTP--DN 188 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-----------TCCEEEEEEETTCCCCCBSCCGGGSEECT--TS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC-----------CCcEEEEEECCCccccccCCCcceEEEcC--CC
Confidence 789999999887775 46789999986 34555555321 11234567764 58
Q ss_pred cEEEEEEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee---ee
Q psy2762 81 TLLASCSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR---KI 155 (318)
Q Consensus 81 ~~las~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~---~~ 155 (318)
++|+.+.. +++|.+.|..+.+.+....+.+ +....|+. ...+++.+.||.+.+.+....+ .... .+
T Consensus 189 k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g------~~~~~p~g-~~~~v~~~~dG~~~~V~~~~~~--v~~~~~~~~ 259 (426)
T 3c75_H 189 KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD------CYHIFPAS-PTVFYMNCRDGSLARVDFADGE--TKVTNTEVF 259 (426)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEEECCS------EEEEEEEE-TTEEEEEETTSSEEEEECCTTC--CEEEECCCC
T ss_pred CEEEEEecCCCCeEEEEECCCCeEEEEEEcCC------ceeeccCC-CcEEEEEcCCCCEEEEECCCCc--EEEEeeeee
Confidence 88888875 5799999999887555443321 13344543 2445566677777666652111 1100 00
Q ss_pred ccccccc-ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE--EEccc--------CCCCee
Q psy2762 156 AAHTIGC-NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE--TKLEN--------HSDWVR 224 (318)
Q Consensus 156 ~~h~~~v-~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~--~~~~~--------h~~~V~ 224 (318)
.....++ ....++|+ +..++..+..+.|.+.|...+..... ..+.. ......
T Consensus 260 ~v~~~p~~~~~~~~~d-----------------g~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~ 322 (426)
T 3c75_H 260 HTEDELLINHPAFSLR-----------------SGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQ 322 (426)
T ss_dssp SCTTSCBCSCCEECTT-----------------TCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSS
T ss_pred ccCCCceeeEeeecCC-----------------CCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCce
Confidence 0000111 11233443 23344445678999999865432111 11100 011122
Q ss_pred EEEEccCCCCCccEEEEEe---------CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEe-CCCeEE
Q psy2762 225 DVAWAPSWGLSKCMIASCS---------QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVS 293 (318)
Q Consensus 225 ~v~~sp~~~~~~~~l~s~s---------~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~-~D~~v~ 293 (318)
.+.++|+ .++.+++.. .++.|.+.|..+... ...+. .....+.++|+|||+ .|+++. .+++|.
T Consensus 323 ~va~s~d---g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv--v~~I~-vg~~P~gia~spDg~~~lyv~n~~s~~Vs 396 (426)
T 3c75_H 323 QTAYHRQ---SDRIYLLVDQRDEWKHKAASRFVVVLNAETGER--INKIE-LGHEIDSINVSQDAEPLLYALSAGTQTLH 396 (426)
T ss_dssp CEEEEGG---GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eeEEcCC---CCEEEEEecccccccccCCCCEEEEEECCCCeE--EEEEE-CCCCcCeEEEccCCCEEEEEEcCCCCeEE
Confidence 3688996 233444433 135799999887542 22222 223578999999999 888888 599999
Q ss_pred EEEECCCCceEEEe
Q psy2762 294 LWKENTDGAWQCIT 307 (318)
Q Consensus 294 iW~~~~~~~~~~~~ 307 (318)
++|..+....+.+.
T Consensus 397 VID~~t~kvv~tI~ 410 (426)
T 3c75_H 397 IYDAATGEELRSVD 410 (426)
T ss_dssp EEETTTCCEEEEEC
T ss_pred EEECCCCCEEEEec
Confidence 99988765555543
No 214
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.93 E-value=1.6e-06 Score=74.96 Aligned_cols=202 Identities=7% Similarity=0.056 Sum_probs=122.7
Q ss_pred ccccCeEEEEecCCCCCcEEEE-------EECCCeEEEEeCCCCcEEEEEEe---cCCCcCeEEEEeeCCCCCcEEEEee
Q psy2762 64 GHSGPVWQVAWAHPQFGTLLAS-------CSYDRKVIIWRGDNGNWFKYYEY---NNHDSSVNSIAWAPKEFGLILACGS 133 (318)
Q Consensus 64 ~h~~~V~~v~~~~~~~~~~las-------~s~Dg~v~vWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~~lasgs 133 (318)
..-....+++|. + ++.++++ +..++.|.+||..+++.... .. .++...+.++++.|+. +.++++..
T Consensus 15 ~~~~~~~~~~~~-~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-g~l~v~~~ 90 (314)
T 1pjx_A 15 EDIPGAEGPVFD-K-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVI-CKPEVNGYGGIPAGCQCDRDA-NQLFVADM 90 (314)
T ss_dssp CCCTTCEEEEEC-T-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEE-ECCEETTEECCEEEEEECSSS-SEEEEEET
T ss_pred ccCCCccCceEC-C-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEE-EecccCCCCCCCceEEEecCC-CcEEEEEC
Confidence 334456788996 3 5777777 67789999999877764322 21 1244668899999872 34444433
Q ss_pred cCCeEEEEEeecCCCCcceeee-c----c-cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC----------
Q psy2762 134 SDGTISFLTYMSDTNSWESRKI-A----A-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---------- 197 (318)
Q Consensus 134 ~d~~i~i~~~~~~~~~~~~~~~-~----~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---------- 197 (318)
...|.+|+.. +. ...+ . . ....+..++++|+ +..+++...+
T Consensus 91 -~~~l~~~d~~-g~----~~~~~~~~~~~~~~~~~~~i~~d~~-----------------g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 91 -RLGLLVVQTD-GT----FEEIAKKDSEGRRMQGCNDCAFDYE-----------------GNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp -TTEEEEEETT-SC----EEECCSBCTTSCBCBCCCEEEECTT-----------------SCEEEEECBCBCTTSCCCBT
T ss_pred -CCCEEEEeCC-CC----EEEEEeccCCCccccCCcCEEECCC-----------------CCEEEEecCccccccccccc
Confidence 4467777753 21 2222 1 1 1124667777775 3445554444
Q ss_pred -----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEc----cCCCCCccE-EEEEeCCCeEEEEEcC-CCcceeeEE---
Q psy2762 198 -----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWA----PSWGLSKCM-IASCSQDRKVIIWTSN-DYVTWTPFI--- 263 (318)
Q Consensus 198 -----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~s----p~~~~~~~~-l~s~s~D~~i~vw~~~-~~~~~~~~~--- 263 (318)
+.|..|+.+ ++.... ..+......++|+ |+ +.. +++...++.|.+|+.. .........
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~---~~~~~~~~~i~~~~~~d~d----g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~ 219 (314)
T 1pjx_A 148 MQEKFGSIYCFTTD-GQMIQV---DTAFQFPNGIAVRHMNDGR----PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH 219 (314)
T ss_dssp TSSSCEEEEEECTT-SCEEEE---EEEESSEEEEEEEECTTSC----EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCCeEEEECCC-CCEEEe---ccCCCCcceEEEecccCCC----CCEEEEEECCCCeEEEEECCCCCccccceEEEE
Confidence 467777765 433221 1233346889999 86 644 4555678999999875 221101111
Q ss_pred eeecC-CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 264 MNTFD-DVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 264 ~~~~~-~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
+..+. ..+..++++++|+++++...++.|.+|+.+++
T Consensus 220 ~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 220 IPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp CCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred CCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 12222 56789999999999888878899999986543
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.85 E-value=4.6e-06 Score=72.07 Aligned_cols=202 Identities=11% Similarity=0.054 Sum_probs=121.2
Q ss_pred cccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEE
Q psy2762 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT 142 (318)
Q Consensus 63 ~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~ 142 (318)
..+.....+..|.+ .++.++++...++.|..||..++.. ..+. ....+.+++++|+ +.++++ . +..|.+|+
T Consensus 9 ~~~~~~~Egp~w~~-~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~---~~~~~~~i~~~~d--G~l~v~-~-~~~l~~~d 79 (297)
T 3g4e_A 9 PENCRCGESPVWEE-VSNSLLFVDIPAKKVCRWDSFTKQV-QRVT---MDAPVSSVALRQS--GGYVAT-I-GTKFCALN 79 (297)
T ss_dssp CCCCSBEEEEEEET-TTTEEEEEETTTTEEEEEETTTCCE-EEEE---CSSCEEEEEEBTT--SSEEEE-E-TTEEEEEE
T ss_pred ccCCccccCCeEEC-CCCEEEEEECCCCEEEEEECCCCcE-EEEe---CCCceEEEEECCC--CCEEEE-E-CCeEEEEE
Confidence 34444566788864 3577888888889999999887653 2222 3567999999998 555554 3 55677777
Q ss_pred eecCCCCcceeeecc-----cccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cC--------CCeEEEEEccC-
Q psy2762 143 YMSDTNSWESRKIAA-----HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GC--------DNLIKIWKQEG- 207 (318)
Q Consensus 143 ~~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~--------d~~i~iwd~~~- 207 (318)
...+. ...+.. ....++.+.++|+ +..+++. +. ...-+||.+..
T Consensus 80 ~~~g~----~~~~~~~~~~~~~~~~~di~~d~d-----------------G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~ 138 (297)
T 3g4e_A 80 WKEQS----AVVLATVDNDKKNNRFNDGKVDPA-----------------GRYFAGTMAEETAPAVLERHQGALYSLFPD 138 (297)
T ss_dssp TTTTE----EEEEEECCTTCSSEEEEEEEECTT-----------------SCEEEEEEECCSBTTBCCTTCEEEEEECTT
T ss_pred CCCCc----EEEEEecCCCCCCCCCCCEEECCC-----------------CCEEEecCCcccccccccCCCcEEEEEECC
Confidence 53221 122211 1123566778876 3333332 21 12345555432
Q ss_pred CeEEEEEEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcC--CCcceeeEEe---eecCCcEEEEEEcCCCC
Q psy2762 208 DKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSN--DYVTWTPFIM---NTFDDVVWNVSWSLTGD 281 (318)
Q Consensus 208 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~--~~~~~~~~~~---~~~~~~v~~v~~spdg~ 281 (318)
++... +..+....+.++|+|+ +. ++++.+.++.|.+|+.. +......... ......+..++++++|+
T Consensus 139 g~~~~---~~~~~~~pngi~~spd----g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 139 HHVKK---YFDQVDISNGLDWSLD----HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp SCEEE---EEEEESBEEEEEECTT----SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC
T ss_pred CCEEE---EeeccccccceEEcCC----CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC
Confidence 22211 1223334689999997 54 45666678899999874 2211111111 12235678999999999
Q ss_pred EEEEEeCCCeEEEEEECCCC
Q psy2762 282 ILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 282 ~l~s~~~D~~v~iW~~~~~~ 301 (318)
+.++...++.|.+|+.+++.
T Consensus 212 lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEEETTTEEEEECTTTCC
T ss_pred EEEEEcCCCEEEEEcCCCce
Confidence 88877778889999865443
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.84 E-value=2.5e-07 Score=82.83 Aligned_cols=240 Identities=10% Similarity=-0.045 Sum_probs=133.2
Q ss_pred eecCCCcceeeeeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-------cCe
Q psy2762 7 LVDTGHEDMIHDAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-------GPV 69 (318)
Q Consensus 7 ~~~~gH~~~v~~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-------~~V 69 (318)
++..|.. + .+.|+|||++++.+. .+++|.+||.. +++++.++..+. ..-
T Consensus 61 ~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~-----------T~~vv~~I~v~~~~~~~~g~~P 126 (368)
T 1mda_H 61 HSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV-----------TFLPIADIELPDAPRFSVGPRV 126 (368)
T ss_dssp EEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT-----------TCCEEEEEEETTSCSCCBSCCT
T ss_pred EEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC-----------CCCEEEEEECCCccccccCCCc
Confidence 3445544 3 699999999988876 37899999986 356677765431 224
Q ss_pred EEEEecCCCCCcEEEEEEC--CCeEEE--EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec
Q psy2762 70 WQVAWAHPQFGTLLASCSY--DRKVII--WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS 145 (318)
Q Consensus 70 ~~v~~~~~~~~~~las~s~--Dg~v~v--Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~ 145 (318)
..+.+++ ||++|+.+.. +..|.+ +|..+ .......+ . +.+.|+. ...+++.+.|+.+.+.++..
T Consensus 127 ~~ia~Sp--DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~---~---~~~~p~g-~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 127 HIIGNCA--SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS---C---FHIHPGA-AATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp TSEEECT--TSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS---C---CCCEEEE-TTEEECCCCTTSCEEEECCS
T ss_pred ceEEEcC--CCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC---c---eEEccCC-CeEEEEEcCCCCEEEEECcc
Confidence 5678864 5888988875 467888 98765 22222211 1 2234543 23455666777776666532
Q ss_pred CCC-Ccceee-----ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-
Q psy2762 146 DTN-SWESRK-----IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN- 218 (318)
Q Consensus 146 ~~~-~~~~~~-----~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~- 218 (318)
... ...... +.....+. . .++ +..++-.+. +.|.+.|...+.......+.-
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~---~-~~~-----------------~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~ 252 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAA---Q-ANY-----------------PGMLVWAVA-SSILQGDIPAAGATMKAAIDGN 252 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCE---E-ETT-----------------TTEEEECBS-SCCEEEECCSSCCEEECCCCSS
T ss_pred ccccCCeEEEEeeeeeeCCCCcc---c-ccc-----------------CCEEEEEcC-CEEEEEECCCCcceEEEEEEec
Confidence 000 000000 00000111 1 221 123444445 889999986432111111110
Q ss_pred ------CC---CCeeEEEEccCCCCCccEEEEEe-C-------CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC
Q psy2762 219 ------HS---DWVRDVAWAPSWGLSKCMIASCS-Q-------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD 281 (318)
Q Consensus 219 ------h~---~~V~~v~~sp~~~~~~~~l~s~s-~-------D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~ 281 (318)
+. .....+.++|+ .+..+++.. . +..+.++|..+... ...+. .....+.++|+|||+
T Consensus 253 ~~~~~~~~~~p~g~~~v~~s~d---g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v--v~~i~-vg~~p~gi~~s~Dg~ 326 (368)
T 1mda_H 253 ESGRKADNFRSAGFQMVAKLKN---TDGIMILTVEHSRSCLAAAENTSSVTASVGQT--SGPIS-NGHDSDAIIAAQDGA 326 (368)
T ss_dssp CTHHHHTTEEECSSSCEEEETT---TTEEEEEEEECSSCTTSCEEEEEEEESSSCCE--EECCE-EEEEECEEEECCSSS
T ss_pred cccccccccccCcceeeEEcCC---CCEEEEEeccccCcccccCCCEEEEECCCCeE--EEEEE-CCCCcceEEECCCCC
Confidence 10 11122789997 233444433 2 23566999987541 12222 123578999999998
Q ss_pred E-EEEEe-CCCeEEEEEECCC
Q psy2762 282 I-LTVSC-GDNSVSLWKENTD 300 (318)
Q Consensus 282 ~-l~s~~-~D~~v~iW~~~~~ 300 (318)
. +++.. .+++|.++|..+.
T Consensus 327 ~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 327 SDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp CEEEEEETTTTEEEEEESSSC
T ss_pred EEEEEccCCCCeEEEEECCCC
Confidence 4 55555 5999999998775
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.83 E-value=1.1e-07 Score=92.41 Aligned_cols=201 Identities=11% Similarity=0.046 Sum_probs=116.5
Q ss_pred ccccCeEEEEecCCCCCcEEEE-----EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--
Q psy2762 64 GHSGPVWQVAWAHPQFGTLLAS-----CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-- 136 (318)
Q Consensus 64 ~h~~~V~~v~~~~~~~~~~las-----~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-- 136 (318)
+|...+..++|++ ||++||- |+...+|++||+.+++.... .+.. .....++|+ | +..|+.++.+.
T Consensus 126 ~~~~~l~~~~~Sp--Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~--~k~~~~~Ws-D--g~~l~y~~~~~~~ 197 (693)
T 3iuj_A 126 DGTTALDQLSFSR--DGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD--VKFSGISWL-G--NEGFFYSSYDKPD 197 (693)
T ss_dssp TSCCEEEEEEECT--TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE--EESCCCEEE-T--TTEEEEEESSCCC
T ss_pred CCcEEEEEEEECC--CCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC--ceeccEEEe-C--CCEEEEEEecCcc
Confidence 4555688889974 5888884 33346899999998875432 2221 113567899 8 55566666663
Q ss_pred -----------eEEEEEeecCCCCcceeee---cc-cccccceeeeCCCCCCCccccccCCCCCCccceEE-Eec---CC
Q psy2762 137 -----------TISFLTYMSDTNSWESRKI---AA-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV-SGG---CD 197 (318)
Q Consensus 137 -----------~i~i~~~~~~~~~~~~~~~---~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la-sgs---~d 197 (318)
.|.+|++..+. .+...+ .. |......+.|+|+ +++|+ +.+ .+
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~--~~~~~v~~~~~~~~~~~~~~~~SpD-----------------g~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQ--EDDRLVFGAIPAQHHRYVGATVTED-----------------DRFLLISAANSTSG 258 (693)
T ss_dssp -------CCCCEEEEEETTSCG--GGCEEEESCSGGGCCSEEEEEECTT-----------------SCEEEEEEESSSSC
T ss_pred cccccccCCCcEEEEEECCCCc--ccceEEEecCCCCCeEEEEEEEcCC-----------------CCEEEEEEccCCCC
Confidence 37777753322 111122 12 3334567889997 34443 222 33
Q ss_pred CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC---CeEEEEEcCCCcceeeEEeeecCCcEEEE
Q psy2762 198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFIMNTFDDVVWNV 274 (318)
Q Consensus 198 ~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~vw~~~~~~~~~~~~~~~~~~~v~~v 274 (318)
+.|+++|+.+++. +...+..+....... |+++ ++.++++...| ..|.++++.+........+..+...+.
T Consensus 259 ~~i~~~d~~~~~~-~~~~l~~~~~~~~~~-~~~~---g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-- 331 (693)
T 3iuj_A 259 NRLYVKDLSQENA-PLLTVQGDLDADVSL-VDNK---GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-- 331 (693)
T ss_dssp CEEEEEETTSTTC-CCEEEECSSSSCEEE-EEEE---TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--
T ss_pred cEEEEEECCCCCC-ceEEEeCCCCceEEE-Eecc---CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--
Confidence 5899999876521 112334455555554 5664 24455555444 578888887654211123334444454
Q ss_pred EEcCCCCEEEEEeC-CC--eEEEEEEC
Q psy2762 275 SWSLTGDILTVSCG-DN--SVSLWKEN 298 (318)
Q Consensus 275 ~~spdg~~l~s~~~-D~--~v~iW~~~ 298 (318)
.|+|+++.|+.... |+ .|++|+.+
T Consensus 332 ~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 89999998877764 44 56666644
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.79 E-value=1.3e-06 Score=77.19 Aligned_cols=203 Identities=12% Similarity=0.035 Sum_probs=122.8
Q ss_pred CCcceeeeeeecCCCCEEEEeeC-----CCcEEEEEcCCCcCCCCCCCCcceEEEEeccc------ccCeEEEEecCCCC
Q psy2762 11 GHEDMIHDAEMDYLGLYLATCSS-----DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH------SGPVWQVAWAHPQF 79 (318)
Q Consensus 11 gH~~~v~~~~~~~~g~~l~s~s~-----D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~~~~~~ 79 (318)
+|-..+..++|+++|+++++-.. ++.|.+||+. +++++.++... ...+..+++.++ .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~-----------tg~~~~~~~~~~~~~~~~~~~~~v~vd~~-~ 131 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL-----------NNQLSRVIYLPPPITLSNSFVNDLAVDLI-H 131 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT-----------TTEEEEEEECCTTTSCTTCCCCEEEEETT-T
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC-----------CCeEEEEEECChhhcccccccceEEEecC-C
Confidence 56678999999999987776433 5789999986 34555555422 234678888632 3
Q ss_pred CcEEEEEE---CCCeEEEEeCCCCcEEEEEEecCC-----------------------------CcCeEEEEeeCCCCCc
Q psy2762 80 GTLLASCS---YDRKVIIWRGDNGNWFKYYEYNNH-----------------------------DSSVNSIAWAPKEFGL 127 (318)
Q Consensus 80 ~~~las~s---~Dg~v~vWd~~~~~~~~~~~~~~h-----------------------------~~~v~~v~~~p~~~~~ 127 (318)
+..+++-. .++.|.+||+.+++.... +.+| ...++.|+|+|+ +.
T Consensus 132 g~~yvtd~~~~~~~~i~v~d~~~g~~~r~--~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d--g~ 207 (343)
T 2qe8_A 132 NFVYISDPAPDDKAALIRVDLQTGLAARV--LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE--NE 207 (343)
T ss_dssp TEEEEEECCSGGGCEEEEEETTTCCEEEE--CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT--SC
T ss_pred CEEEEEcCccCCCCeEEEEECCCCCEEEE--ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC--CC
Confidence 55556655 688999999887653332 2221 123688999998 54
Q ss_pred EEEEeecCCeEEEEEeecC--CC-C-cc--e---eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC
Q psy2762 128 ILACGSSDGTISFLTYMSD--TN-S-WE--S---RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN 198 (318)
Q Consensus 128 ~lasgs~d~~i~i~~~~~~--~~-~-~~--~---~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~ 198 (318)
.+..+..++. ++|.+... .. . .. . ....++......++++++ +..+++...++
T Consensus 208 ~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~-----------------G~l~va~~~~~ 269 (343)
T 2qe8_A 208 WLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD-----------------HNIYVGDLAHS 269 (343)
T ss_dssp EEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT-----------------CCEEEEEGGGT
T ss_pred EEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC-----------------CCEEEEccCCC
Confidence 4555555543 44544221 00 0 00 0 011122223445666664 46788888899
Q ss_pred eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762 199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 252 (318)
Q Consensus 199 ~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~ 252 (318)
.|.+||..+++........ +...+.+++|.|+ +.++++.+....+.+|.
T Consensus 270 ~V~~~d~~~G~~~~~~~~~-~~~~p~~va~~~~----g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 270 AIGVITSADRAYKLLVTDE-KLSWTDSFNFGSD----GYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp EEEEEETTTTEEEEEEECG-GGSCEEEEEECTT----SCEEEEECCGGGSGGGB
T ss_pred eEEEEECCCCCEEEEEECC-ceecCCeeEECCC----CcEEEEeCccccccccc
Confidence 9999998455543333222 3456889999985 66777776555554443
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.78 E-value=2.3e-05 Score=71.10 Aligned_cols=231 Identities=12% Similarity=0.077 Sum_probs=134.4
Q ss_pred eec--CCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec--------ccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 20 EMD--YLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK--------GHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 20 ~~~--~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~--------~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
.++ +++++|+. |..+++|.|+|+... ....++.++++ +.. .-..+... | +| +++|+..
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~-------p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~-p-dG-i~Vs~~g 156 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPN-------PREPKIIKVIEPEEVKKVSGYS-RLHTVHCG-P-DA-IYISALG 156 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSC-------TTSCEEEEEECHHHHHHHHCEE-EEEEEEEC-S-SC-EEEEEEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCC-------CCCceeeeeechhhcccccCCC-cccceeEC-C-Ce-EEEEcCC
Confidence 346 77777654 668899999998521 12235666663 111 22234444 3 46 7777766
Q ss_pred C------CeEEEEeCCCCcEEEEEEecCCC-cCeEEEEeeCCCCCcEEEEee-------------------cCCeEEEEE
Q psy2762 89 D------RKVIIWRGDNGNWFKYYEYNNHD-SSVNSIAWAPKEFGLILACGS-------------------SDGTISFLT 142 (318)
Q Consensus 89 D------g~v~vWd~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~~lasgs-------------------~d~~i~i~~ 142 (318)
+ +.|.+.|..+.+.+..+...... ...+.+-|+|+ ...+++.. .+..|.+||
T Consensus 157 ~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~--~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D 234 (462)
T 2ece_A 157 NEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLP--NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWD 234 (462)
T ss_dssp ETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETT--TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEE
T ss_pred CcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCC--CCEEEEccCcCccccccccchhhhhhccCCEEEEEE
Confidence 6 78999999887765555433222 23456888998 44566653 367999999
Q ss_pred eecCCCCcceeeec-c-ccccccee--eeCCCCCCCccccccCCCCCCccceEEEec------CCCeEEEEEccCCeEEE
Q psy2762 143 YMSDTNSWESRKIA-A-HTIGCNAV--SWGPGIGSLSELDLKGSKLGGVAKRLVSGG------CDNLIKIWKQEGDKWIE 212 (318)
Q Consensus 143 ~~~~~~~~~~~~~~-~-h~~~v~~~--~~~p~~~~~~~~~~~~~~~~~~~~~lasgs------~d~~i~iwd~~~~~~~~ 212 (318)
+..++ ....+. + .......+ +|+|+. +++..+. -+++|.+|..+.+++..
T Consensus 235 ~~~~k---~~~tI~vg~~g~~P~~i~f~~~Pdg-----------------~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~ 294 (462)
T 2ece_A 235 LRKRK---RIHSLTLGEENRMALELRPLHDPTK-----------------LMGFINMVVSLKDLSSSIWLWFYEDGKWNA 294 (462)
T ss_dssp TTTTE---EEEEEESCTTEEEEEEEEECSSTTC-----------------CEEEEEEEEETTTCCEEEEEEEEETTEEEE
T ss_pred CCCCc---EeeEEecCCCCCccceeEeeECCCC-----------------CEEEEEEeeeccCCCceEEEEEecCCceeE
Confidence 85331 122222 1 11122233 448763 3433333 56688887766665433
Q ss_pred EEEc--ccC----------------CCCeeEEEEccCCCCCccEEEEEe-CCCeEEEEEcCCCccee-eEEeeec-----
Q psy2762 213 ETKL--ENH----------------SDWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWT-PFIMNTF----- 267 (318)
Q Consensus 213 ~~~~--~~h----------------~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~vw~~~~~~~~~-~~~~~~~----- 267 (318)
...+ ... ......|.+||+ +++|..+. ..+.|.++++....... ......-
T Consensus 295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D----GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~ 370 (462)
T 2ece_A 295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD----DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHR 370 (462)
T ss_dssp EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT----SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTC
T ss_pred EEEEeCCCccccccccccccccccCCCceeEEEECCC----CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecc
Confidence 3321 110 134678999997 66555555 47899999986432111 1111111
Q ss_pred ---------CCcEEEEEEcCCCCEEEEEe
Q psy2762 268 ---------DDVVWNVSWSLTGDILTVSC 287 (318)
Q Consensus 268 ---------~~~v~~v~~spdg~~l~s~~ 287 (318)
...-..++++|||++|..+.
T Consensus 371 ~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 371 ADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp BCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 01246899999999999998
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.78 E-value=8.5e-09 Score=92.59 Aligned_cols=183 Identities=12% Similarity=0.056 Sum_probs=95.6
Q ss_pred CCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762 79 FGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH 158 (318)
Q Consensus 79 ~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h 158 (318)
++.++++++.|+.|..||..+++. .+++.. ..+.+..+.++ +.++++++.|+.|..||...++..|. ...+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~--~W~~~~--~~~~s~p~~~~--g~~~v~~s~dg~l~a~d~~tG~~~w~---~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI--KWTLKE--DPVLQVPTHVE--EPAFLPDPNDGSLYTLGSKNNEGLTK---LPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE--EEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCSEE---CSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE--EEEecC--CCceecceEcC--CCEEEEeCCCCEEEEEECCCCceeee---eecc
Confidence 468899999999999999998874 344443 34444444454 45677778999999998765543222 1111
Q ss_pred ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccE
Q psy2762 159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238 (318)
Q Consensus 159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~ 238 (318)
.... +..+|.. ..+..+++++.|+.|+.||..+++.. ..+..+. .+.++|+ +..
T Consensus 79 ~~~~--~~~sp~~--------------~~~~~v~~g~~dg~v~a~D~~tG~~~--w~~~~~~----~~~~~p~----~~~ 132 (369)
T 2hz6_A 79 IPEL--VQASPCR--------------SSDGILYMGKKQDIWYVIDLLTGEKQ--QTLSSAF----ADSLSPS----TSL 132 (369)
T ss_dssp HHHH--HTTCSCC-------------------CCCCEEEEEEEEECCC--------------------------------
T ss_pred Cccc--cccCceE--------------ecCCEEEEEeCCCEEEEEECCCCcEE--EEecCCC----ccccccc----CCE
Confidence 1000 0011110 00235778889999999999887642 2333332 2345663 667
Q ss_pred EEEEeCCCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCC---CEEEEEeCCCeEEEEEECCCC
Q psy2762 239 IASCSQDRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTG---DILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 239 l~s~s~D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg---~~l~s~~~D~~v~iW~~~~~~ 301 (318)
|++++.|+.|+.||..+.. .|... .... ...++++++ ..++.++.||.|..||..++.
T Consensus 133 v~~~~~dg~v~a~d~~tG~~~W~~~-~~~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 133 LYLGRTEYTITMYDTKTRELRWNAT-YFDY----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp EEEEEEEEEEECCCSSSSSCCCEEE-EEEE----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred EEEEecCCEEEEEECCCCCEEEeEe-cccc----cCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 8889999999999987654 24322 1111 223344432 456678899999999977654
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.72 E-value=9.8e-05 Score=66.09 Aligned_cols=241 Identities=10% Similarity=-0.034 Sum_probs=135.4
Q ss_pred eecCCCCEEEEeeC--CC---cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE-------
Q psy2762 20 EMDYLGLYLATCSS--DH---TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS------- 87 (318)
Q Consensus 20 ~~~~~g~~l~s~s~--D~---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s------- 87 (318)
...|++.+++.+.. .. +|.++|.. +++++.++.....+ .+.+++ ++++|+.+.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~-----------t~~~~~~i~~g~~p--~i~~sp--Dg~~lyv~n~~~~~~~ 91 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAG-----------SGSILGHVNGGFLP--NPVAAH--SGSEFALASTSFSRIA 91 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECC-----------CCeEEEEecCCCCC--CeEECC--CCCEEEEEeccccccc
Confidence 34578887776643 22 88999986 35667777654444 888874 588888876
Q ss_pred ---CCCeEEEEeCCCCcEEEEEEec--C---CCcCeEEEEeeCCCCCcEEEEeec--CCeEEEEEeecCCCCcceee-ec
Q psy2762 88 ---YDRKVIIWRGDNGNWFKYYEYN--N---HDSSVNSIAWAPKEFGLILACGSS--DGTISFLTYMSDTNSWESRK-IA 156 (318)
Q Consensus 88 ---~Dg~v~vWd~~~~~~~~~~~~~--~---h~~~v~~v~~~p~~~~~~lasgs~--d~~i~i~~~~~~~~~~~~~~-~~ 156 (318)
.++.|.+||..+.+......+. . +......++|+|+ ++++..++. ++.|.++| ..++ .... +.
T Consensus 92 rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spD--G~~l~v~n~~~~~~v~viD-~t~~---~~~~~i~ 165 (373)
T 2mad_H 92 KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN--NADLLFFQFAAGPAVGLVV-QGGS---SDDQLLS 165 (373)
T ss_pred cCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCC--CCEEEEEecCCCCeEEEEE-CCCC---EEeEEcC
Confidence 3688999999876544433332 0 0123457899999 555665553 57888887 5443 1122 21
Q ss_pred ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE---cccCCCCe-eEEEEccCC
Q psy2762 157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK---LENHSDWV-RDVAWAPSW 232 (318)
Q Consensus 157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~---~~~h~~~V-~~v~~sp~~ 232 (318)
. . . ++.+.|.. ...+++.+.||.+.++|. +++...... ......++ ....|.++
T Consensus 166 ~-~-~--~~~~~~~~----------------~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~- 223 (373)
T 2mad_H 166 S-P-T--CYHIHPGA----------------PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK- 223 (373)
T ss_pred C-C-c--eEEEEeCC----------------CceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec-
Confidence 1 1 1 12233321 134566778999999998 654331111 00111121 22455664
Q ss_pred CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee----------cCCcEEEEEEcCCCCEEEEEeC----------CCeE
Q psy2762 233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT----------FDDVVWNVSWSLTGDILTVSCG----------DNSV 292 (318)
Q Consensus 233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~----------~~~~v~~v~~spdg~~l~s~~~----------D~~v 292 (318)
++.++. .+..+.+.+.|.............. .......++++|||+.|..+.. ++.|
T Consensus 224 --~~~~~~-~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V 300 (373)
T 2mad_H 224 --SGRIVW-PVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEV 300 (373)
T ss_pred --CCEEEE-EcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeE
Confidence 233333 3467888888886432111010100 0122445789999988877653 3578
Q ss_pred EEEEECCCCceEEE
Q psy2762 293 SLWKENTDGAWQCI 306 (318)
Q Consensus 293 ~iW~~~~~~~~~~~ 306 (318)
.+.|..+......+
T Consensus 301 ~VID~~t~~vv~~i 314 (373)
T 2mad_H 301 TSVTGLVGQTSSQI 314 (373)
T ss_pred EEEECCCCEEEEEE
Confidence 88886654333333
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.70 E-value=2.9e-06 Score=73.63 Aligned_cols=199 Identities=14% Similarity=0.111 Sum_probs=118.9
Q ss_pred EEEecccccCeEEEEecCCCCCc-EEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe
Q psy2762 59 IAELKGHSGPVWQVAWAHPQFGT-LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT 137 (318)
Q Consensus 59 ~~~~~~h~~~V~~v~~~~~~~~~-~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~ 137 (318)
+..+..+.....+..|.+ +++ ++++...++.|..|+.. +.. .. +..+...++.+++.|+ +.++++...++.
T Consensus 37 ~~~l~~~~~~~egp~~~~--~g~~l~~~d~~~~~i~~~~~~-g~~-~~--~~~~~~~~~gl~~d~d--G~l~v~~~~~~~ 108 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWE--AQRTLVWSDLVGRRVLGWRED-GTV-DV--LLDATAFTNGNAVDAQ--QRLVHCEHGRRA 108 (305)
T ss_dssp CEEEECCCSSEEEEEEEG--GGTEEEEEETTTTEEEEEETT-SCE-EE--EEESCSCEEEEEECTT--SCEEEEETTTTE
T ss_pred eEEEecCCcCccCCeEeC--CCCEEEEEECCCCEEEEEeCC-CCE-EE--EeCCCCccceeeECCC--CCEEEEECCCCE
Confidence 344455566778889974 466 77787788999999974 432 22 2234567899999998 666766556677
Q ss_pred EEEEEeecCCCCcceeeeccc-----ccccceeeeCCCCCCCccccccCCCCCCccceEEE----ecC------------
Q psy2762 138 ISFLTYMSDTNSWESRKIAAH-----TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVS----GGC------------ 196 (318)
Q Consensus 138 i~i~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~las----gs~------------ 196 (318)
|..++.. +. ...+..+ ...++.+++.|+ +..+++ |..
T Consensus 109 v~~~~~~-g~----~~~~~~~~~~~~~~~~~~i~~d~d-----------------G~l~~td~~~g~~~~~~~~~~~~~~ 166 (305)
T 3dr2_A 109 ITRSDAD-GQ----AHLLVGRYAGKRLNSPNDLIVARD-----------------GAIWFTDPPFGLRKPSQGCPADPEL 166 (305)
T ss_dssp EEEECTT-SC----EEEEECEETTEECSCCCCEEECTT-----------------SCEEEECCSGGGSCGGGSCCCCCSS
T ss_pred EEEECCC-CC----EEEEEeccCCCccCCCCCEEECCC-----------------CCEEEeCcCCCcccccccccccccc
Confidence 8777642 21 2222111 123567778775 344454 332
Q ss_pred -CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC------CeEEEEEcCCCcceeeEEee-ecC
Q psy2762 197 -DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD------RKVIIWTSNDYVTWTPFIMN-TFD 268 (318)
Q Consensus 197 -d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D------~~i~vw~~~~~~~~~~~~~~-~~~ 268 (318)
.+.|..+|..+++..... .....+.++|+|+ +..|..+... +.|.+|++............ ...
T Consensus 167 ~~~~v~~~d~~~g~~~~~~----~~~~p~gl~~spd----g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~ 238 (305)
T 3dr2_A 167 AHHSVYRLPPDGSPLQRMA----DLDHPNGLAFSPD----EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD 238 (305)
T ss_dssp SCEEEEEECSSSCCCEEEE----EESSEEEEEECTT----SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS
T ss_pred CCCeEEEEcCCCCcEEEEe----cCCCCcceEEcCC----CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC
Confidence 245777776555433221 2234688999996 6656665554 78999987653200011111 112
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 269 DVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
.....++++++|++.+ +..+ .|.+|+.
T Consensus 239 ~~pdgi~~d~~G~lwv-~~~~-gv~~~~~ 265 (305)
T 3dr2_A 239 GLPDGFCVDRGGWLWS-SSGT-GVCVFDS 265 (305)
T ss_dssp SCCCSEEECTTSCEEE-CCSS-EEEEECT
T ss_pred CCCCeEEECCCCCEEE-ecCC-cEEEECC
Confidence 3345789999999654 4444 4888874
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.65 E-value=4.3e-05 Score=66.96 Aligned_cols=192 Identities=10% Similarity=-0.030 Sum_probs=113.7
Q ss_pred eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC
Q psy2762 69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148 (318)
Q Consensus 69 V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~ 148 (318)
..+..|++ ..+.++++...++.|..||..++.. ..+. ....+.++++.|+ +.++++ +.+ .|.+|+...+.
T Consensus 51 ~egp~~~~-~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~---~~~~v~~i~~~~d--g~l~v~-~~~-gl~~~d~~~g~- 120 (326)
T 2ghs_A 51 GEGPTFDP-ASGTAWWFNILERELHELHLASGRK-TVHA---LPFMGSALAKISD--SKQLIA-SDD-GLFLRDTATGV- 120 (326)
T ss_dssp EEEEEEET-TTTEEEEEEGGGTEEEEEETTTTEE-EEEE---CSSCEEEEEEEET--TEEEEE-ETT-EEEEEETTTCC-
T ss_pred CcCCeEeC-CCCEEEEEECCCCEEEEEECCCCcE-EEEE---CCCcceEEEEeCC--CeEEEE-ECC-CEEEEECCCCc-
Confidence 45678864 3466777777889999999887643 2222 2467999999998 555554 344 47777753222
Q ss_pred Ccceeeeccc-----ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC----CeEEEEEccCCeEEEEEEcccC
Q psy2762 149 SWESRKIAAH-----TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD----NLIKIWKQEGDKWIEETKLENH 219 (318)
Q Consensus 149 ~~~~~~~~~h-----~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d----~~i~iwd~~~~~~~~~~~~~~h 219 (318)
...+... ...++.+.++|+ +..+++...+ +...||.+.+++.... ..+
T Consensus 121 ---~~~~~~~~~~~~~~~~~~i~~d~~-----------------G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~---~~~ 177 (326)
T 2ghs_A 121 ---LTLHAELESDLPGNRSNDGRMHPS-----------------GALWIGTMGRKAETGAGSIYHVAKGKVTKL---FAD 177 (326)
T ss_dssp ---EEEEECSSTTCTTEEEEEEEECTT-----------------SCEEEEEEETTCCTTCEEEEEEETTEEEEE---EEE
T ss_pred ---EEEEeeCCCCCCCCCCCCEEECCC-----------------CCEEEEeCCCcCCCCceEEEEEeCCcEEEe---eCC
Confidence 1222111 124567778876 3333333211 2334444334443221 122
Q ss_pred CCCeeEEEEccCCCCCccEE-EEEeCCCeEEEEEcC--CC-cceeeEEee---ecCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy2762 220 SDWVRDVAWAPSWGLSKCMI-ASCSQDRKVIIWTSN--DY-VTWTPFIMN---TFDDVVWNVSWSLTGDILTVSCGDNSV 292 (318)
Q Consensus 220 ~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~vw~~~--~~-~~~~~~~~~---~~~~~v~~v~~spdg~~l~s~~~D~~v 292 (318)
....+.++|+|+ +..| ++.+.++.|.+|+.. +. ......... .....+..++++++|++.++...++.|
T Consensus 178 ~~~~~~i~~s~d----g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v 253 (326)
T 2ghs_A 178 ISIPNSICFSPD----GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAV 253 (326)
T ss_dssp ESSEEEEEECTT----SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEE
T ss_pred CcccCCeEEcCC----CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEE
Confidence 334678999996 5544 555567899999975 32 111111111 123457889999999988777677889
Q ss_pred EEEEE
Q psy2762 293 SLWKE 297 (318)
Q Consensus 293 ~iW~~ 297 (318)
.+|+.
T Consensus 254 ~~~d~ 258 (326)
T 2ghs_A 254 DRYDT 258 (326)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 99975
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.61 E-value=2.2e-08 Score=89.93 Aligned_cols=206 Identities=15% Similarity=0.090 Sum_probs=104.4
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEE
Q psy2762 24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF 103 (318)
Q Consensus 24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~ 103 (318)
++.++++++.|+.|..||.. +|+++-.++. +.+.+..+.. ++..+++++.|+.|..||..+++..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~-----------tG~~~W~~~~--~~~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKR-----------TGSIKWTLKE--DPVLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEGL 72 (369)
T ss_dssp CTTEEEEEETTSEEEEEETT-----------TCCEEEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCS
T ss_pred eCCEEEEEcCCCEEEEEECC-----------CCCEEEEecC--CCceecceEc--CCCEEEEeCCCCEEEEEECCCCcee
Confidence 57789999999999999986 3555555554 4554443332 3667888889999999999776532
Q ss_pred EEEEecCCCc-CeEEEEeeCCC-CCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccC
Q psy2762 104 KYYEYNNHDS-SVNSIAWAPKE-FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181 (318)
Q Consensus 104 ~~~~~~~h~~-~v~~v~~~p~~-~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~ 181 (318)
+.+..+.. .+ ..+|-- .+..+++++.|+.|..||...++..|. ...+. ...++|.
T Consensus 73 --w~~~~~~~~~~---~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~---~~~~~----~~~~~p~----------- 129 (369)
T 2hz6_A 73 --TKLPFTIPELV---QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQT---LSSAF----ADSLSPS----------- 129 (369)
T ss_dssp --EECSCCHHHHH---TTCSCC-----CCCCEEEEEEEEECCC-------------------------------------
T ss_pred --eeeeccCcccc---ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEE---ecCCC----ccccccc-----------
Confidence 22222211 11 011110 123466788899999998765553332 11111 1223332
Q ss_pred CCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-cee
Q psy2762 182 SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-TWT 260 (318)
Q Consensus 182 ~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-~~~ 260 (318)
+..+++++.|+.|+.||..+++..-....... ....++++... ...++.++.|+.|..||..+.. .|.
T Consensus 130 ------~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~-~~~v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 130 ------TSLLYLGRTEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDY-KMSHFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTC-CCCEEEEETSCEEEEECTTTCCEEEE
T ss_pred ------CCEEEEEecCCEEEEEECCCCCEEEeEecccc----cCccccCCccc-cceEEEECCCCEEEEEECCCCcEEEE
Confidence 35688899999999999887753212211111 11222221101 1456778899999999987653 222
Q ss_pred eEEeeecCCcEE-EEEEcCCCCE
Q psy2762 261 PFIMNTFDDVVW-NVSWSLTGDI 282 (318)
Q Consensus 261 ~~~~~~~~~~v~-~v~~spdg~~ 282 (318)
.....++. ...++++|..
T Consensus 199 ----~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 199 ----QNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp ----EECSSCEEEEEECTTSSCE
T ss_pred ----ecCCCceEEEEEecCCceE
Confidence 12334443 3455666653
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.60 E-value=9e-06 Score=78.70 Aligned_cols=53 Identities=9% Similarity=0.235 Sum_probs=38.8
Q ss_pred CeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 246 RKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 246 ~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
+.|..||+.+.. .|+ ..+..++++..++++|..++.++.|+.+++||..++..
T Consensus 457 g~l~A~D~~tG~~~W~----~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWS----VEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTTEEEEE----EEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cEEEEEeCCCCcEEee----cCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 778999987643 222 22334556667778888999999999999999887654
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.59 E-value=7.9e-06 Score=79.26 Aligned_cols=54 Identities=17% Similarity=0.338 Sum_probs=38.1
Q ss_pred CCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 245 DRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 245 D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
++.|+.||+.+.. .|+. .+..+++...++..|.+++.++.|+.++.||.+++..
T Consensus 454 ~g~l~A~D~~tG~~~W~~----~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEV----PYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEEETTTTEEEEEE----EESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ceeEEEEECCCCCeEeEc----cCCCCccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 4779999987653 2322 2223344456677888999999999999999888653
No 227
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.48 E-value=6e-05 Score=67.51 Aligned_cols=225 Identities=10% Similarity=-0.015 Sum_probs=128.7
Q ss_pred eeecCCCCEEEEeeC-----CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE------
Q psy2762 19 AEMDYLGLYLATCSS-----DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS------ 87 (318)
Q Consensus 19 ~~~~~~g~~l~s~s~-----D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s------ 87 (318)
....|++..++.... +++|.+.|.. +++++.++.....+ .+.+++ +|++|+.++
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~-----------t~~v~~~I~vG~~P--~va~sp--DG~~lyVan~~~~r~ 102 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGE-----------AGRVIGMIDGGFLP--NPVVAD--DGSFIAHASTVFSRI 102 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETT-----------TTEEEEEEEECSSC--EEEECT--TSSCEEEEEEEEEET
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECC-----------CCeEEEEEECCCCC--cEEECC--CCCEEEEEccccccc
Confidence 445789988777654 6899999986 45777777755555 388874 588777765
Q ss_pred ----CCCeEEEEeCCCCcEEEEEEecC-----CCcCeEEEEeeCCCCCcEEEEee--cCCeEEEEEeecCCCCcceeeec
Q psy2762 88 ----YDRKVIIWRGDNGNWFKYYEYNN-----HDSSVNSIAWAPKEFGLILACGS--SDGTISFLTYMSDTNSWESRKIA 156 (318)
Q Consensus 88 ----~Dg~v~vWd~~~~~~~~~~~~~~-----h~~~v~~v~~~p~~~~~~lasgs--~d~~i~i~~~~~~~~~~~~~~~~ 156 (318)
.+++|.+||..+.+.+....+.. .......++|+|+ +.++..+. .++.|.++|....+ ....+.
T Consensus 103 ~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spD--Gk~lyVan~~~~~~VsVID~~t~~---vv~tI~ 177 (386)
T 3sjl_D 103 ARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD--GKTLLFYQFSPAPAVGVVDLEGKA---FKRMLD 177 (386)
T ss_dssp TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT--SSEEEEEECSSSCEEEEEETTTTE---EEEEEE
T ss_pred ccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCC--CCEEEEEEcCCCCeEEEEECCCCc---EEEEEE
Confidence 36789999999887655544432 0124567899999 55555444 36889999874432 112221
Q ss_pred ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEEE--cccCCCCee-EEEEccCC
Q psy2762 157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEETK--LENHSDWVR-DVAWAPSW 232 (318)
Q Consensus 157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~~--~~~h~~~V~-~v~~sp~~ 232 (318)
. .++ ...+ |.. .+.+++.+.||++-+.++.. ++...... +..-..++. ...|.+.
T Consensus 178 v--~g~-~~~~-P~g----------------~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~- 236 (386)
T 3sjl_D 178 V--PDC-YHIF-PTA----------------PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK- 236 (386)
T ss_dssp C--CSE-EEEE-EEE----------------TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT-
T ss_pred C--CCc-ceee-cCC----------------CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC-
Confidence 1 111 1111 211 23566778899988888765 43221111 111112221 2355422
Q ss_pred CCCccEEEEEeCCCeEEEEEcCCCccee--eEEeee--------cCCcEEEEEEcCCCCEEEEEe
Q psy2762 233 GLSKCMIASCSQDRKVIIWTSNDYVTWT--PFIMNT--------FDDVVWNVSWSLTGDILTVSC 287 (318)
Q Consensus 233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~--~~~~~~--------~~~~v~~v~~spdg~~l~s~~ 287 (318)
+|+++. .+.+++|.+.|..+..... +..+.. ......-++++|+++.|..+.
T Consensus 237 --dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~ 298 (386)
T 3sjl_D 237 --AGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLV 298 (386)
T ss_dssp --TTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred --CCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEe
Confidence 354433 6668999999986542100 000000 011223477899998888764
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.45 E-value=5.9e-05 Score=68.46 Aligned_cols=201 Identities=16% Similarity=0.135 Sum_probs=116.1
Q ss_pred cEEEEEECCCeEEEEeCCCC--cEEEEEEec------CCC-cCeEEEEeeCCCCCcEEEEeecC------CeEEEEEeec
Q psy2762 81 TLLASCSYDRKVIIWRGDNG--NWFKYYEYN------NHD-SSVNSIAWAPKEFGLILACGSSD------GTISFLTYMS 145 (318)
Q Consensus 81 ~~las~s~Dg~v~vWd~~~~--~~~~~~~~~------~h~-~~v~~v~~~p~~~~~~lasgs~d------~~i~i~~~~~ 145 (318)
.+++++-.+.+|.|.|..+. +......++ ... ...-.+.+.|+ + +++++..+ +.|.++|...
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd--G-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD--A-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS--C-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC--e-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 45556667889999998643 222222221 111 13345677888 5 55555555 6788876532
Q ss_pred CCCCcceeeec-c-cccc-cceeeeCCCCCCCccccccCCCCCCccceEEEec-------------------CCCeEEEE
Q psy2762 146 DTNSWESRKIA-A-HTIG-CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-------------------CDNLIKIW 203 (318)
Q Consensus 146 ~~~~~~~~~~~-~-h~~~-v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-------------------~d~~i~iw 203 (318)
.+ .+..+. + .... -..+.|+|+ ++.+++.. .+.+|.+|
T Consensus 174 ~~---v~~~~~~~~~~~~~~Yd~~~~p~-----------------~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~ 233 (462)
T 2ece_A 174 FE---PLGKWEIDRGDQYLAYDFWWNLP-----------------NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW 233 (462)
T ss_dssp CC---EEEECCSBCTTCCCCCCEEEETT-----------------TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred Ce---EEEEEccCCCCccccceEEECCC-----------------CCEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence 22 122222 1 1111 124566775 34566653 47899999
Q ss_pred EccCCeEEEEEEcccCCCCeeEEEE--ccCCCCCccEEEEEe------CCCeEEEEEcCCCcceeeEE---eee--c---
Q psy2762 204 KQEGDKWIEETKLENHSDWVRDVAW--APSWGLSKCMIASCS------QDRKVIIWTSNDYVTWTPFI---MNT--F--- 267 (318)
Q Consensus 204 d~~~~~~~~~~~~~~h~~~V~~v~~--sp~~~~~~~~l~s~s------~D~~i~vw~~~~~~~~~~~~---~~~--~--- 267 (318)
|+.+++..+...+.........|.| +|+ +.++..++ .+++|.+|..... .+.... +.. .
T Consensus 234 D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pd----g~~aYV~~e~~~~~Lss~V~v~~~d~g-~~~~~~vIdi~~~~v~~~ 308 (462)
T 2ece_A 234 DLRKRKRIHSLTLGEENRMALELRPLHDPT----KLMGFINMVVSLKDLSSSIWLWFYEDG-KWNAEKVIEIPAEPLEGN 308 (462)
T ss_dssp ETTTTEEEEEEESCTTEEEEEEEEECSSTT----CCEEEEEEEEETTTCCEEEEEEEEETT-EEEEEEEEEECCEECCSS
T ss_pred ECCCCcEeeEEecCCCCCccceeEeeECCC----CCEEEEEEeeeccCCCceEEEEEecCC-ceeEEEEEeCCCcccccc
Confidence 9988765554444212223456666 886 55554444 6778887765442 222111 111 0
Q ss_pred -----------CCcEEEEEEcCCCCEEEEEeC-CCeEEEEEECCCCceEEEeee
Q psy2762 268 -----------DDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGAWQCITEM 309 (318)
Q Consensus 268 -----------~~~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~~~~~~~~~~~ 309 (318)
......+.+||||++|..+.+ .++|+++|+...+..+.+..+
T Consensus 309 lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I 362 (462)
T 2ece_A 309 LPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKV 362 (462)
T ss_dssp CCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred ccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEE
Confidence 134678999999999988875 779999998766656655554
No 229
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.41 E-value=2.5e-05 Score=75.36 Aligned_cols=255 Identities=8% Similarity=0.026 Sum_probs=135.4
Q ss_pred eeeecC-CCCEEEEeeCCC-----------cEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEE
Q psy2762 18 DAEMDY-LGLYLATCSSDH-----------TVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLA 84 (318)
Q Consensus 18 ~~~~~~-~g~~l~s~s~D~-----------~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~la 84 (318)
.+++.+ +|++++.||.+. .+.+||.... ....+..+. .+.....++++.. ++++++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~---------~w~~~~~~~~~~~~~~~~~~~~~--~g~lyv 258 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG---------IVSDRTVTVTKHDMFCPGISMDG--NGQIVV 258 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC---------CBCCCEEEECSCCCSSCEEEECT--TSCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC---------cEEeCcccCCCCCCccccccCCC--CCCEEE
Confidence 455666 888888888654 5788887632 222222221 2222233344432 588999
Q ss_pred EEEC-CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cC-----CeEEEEEeecCCCCcceeee--
Q psy2762 85 SCSY-DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SD-----GTISFLTYMSDTNSWESRKI-- 155 (318)
Q Consensus 85 s~s~-Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d-----~~i~i~~~~~~~~~~~~~~~-- 155 (318)
.||. +..+.+||+.+.++.....+..... -.++++.++ +++++.|+ .+ ..+.+||+.. +.|.....
T Consensus 259 ~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~d--g~iyv~GG~~~~~~~~~~~e~yd~~t--~~W~~~~~~~ 333 (656)
T 1k3i_A 259 TGGNDAKKTSLYDSSSDSWIPGPDMQVARG-YQSSATMSD--GRVFTIGGSWSGGVFEKNGEVYSPSS--KTWTSLPNAK 333 (656)
T ss_dssp ECSSSTTCEEEEEGGGTEEEECCCCSSCCS-SCEEEECTT--SCEEEECCCCCSSSCCCCEEEEETTT--TEEEEETTSC
T ss_pred eCCCCCCceEEecCcCCceeECCCCCcccc-ccceEEecC--CeEEEEeCcccCCcccccceEeCCCC--CcceeCCCcc
Confidence 9885 4689999998877765433322111 123444555 67888887 34 4567777532 23432110
Q ss_pred -cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC---------CCeEEEEEccCCeEEEEEEcccC------
Q psy2762 156 -AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC---------DNLIKIWKQEGDKWIEETKLENH------ 219 (318)
Q Consensus 156 -~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~---------d~~i~iwd~~~~~~~~~~~~~~h------ 219 (318)
...........+..+ ++.++.|+. ...+..||..++.+.........
T Consensus 334 ~~p~~~~~~~~~~~~~-----------------~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 396 (656)
T 1k3i_A 334 VNPMLTADKQGLYRSD-----------------NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAP 396 (656)
T ss_dssp SGGGCCCCTTGGGTTT-----------------CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECC
T ss_pred ccccccccccceeecC-----------------CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCC
Confidence 000000000001110 122233333 34678889877764322111110
Q ss_pred -CCCeeEEEEccCCCCCccEEEEEeCCC-----------eEEEEEcCCCcceeeEE-eeecCCc-EEEEEEcCCCCEEEE
Q psy2762 220 -SDWVRDVAWAPSWGLSKCMIASCSQDR-----------KVIIWTSNDYVTWTPFI-MNTFDDV-VWNVSWSLTGDILTV 285 (318)
Q Consensus 220 -~~~V~~v~~sp~~~~~~~~l~s~s~D~-----------~i~vw~~~~~~~~~~~~-~~~~~~~-v~~v~~spdg~~l~s 285 (318)
...-.++.|... ++++++.||.+. .|.+||..... |.... ....... -.++...|+|+.++.
T Consensus 397 ~~~~~~av~~~~~---~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~mp~~R~~~~~~~l~~g~i~v~ 472 (656)
T 1k3i_A 397 DAMCGNAVMYDAV---KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP-NTVFASNGLYFARTFHTSVVLPDGSTFIT 472 (656)
T ss_dssp CCBTCEEEEEETT---TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC-EEEECTTCCSSCCBSCEEEECTTSCEEEE
T ss_pred CCCCCceEeccCC---CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC-eeEEccCCCCCCcccCCeEECCCCCEEEE
Confidence 112345555442 477888888643 57778776532 43211 0111222 234567789999999
Q ss_pred EeCC-----------CeEEEEEECCCCceEEEeeec
Q psy2762 286 SCGD-----------NSVSLWKENTDGAWQCITEMG 310 (318)
Q Consensus 286 ~~~D-----------~~v~iW~~~~~~~~~~~~~~~ 310 (318)
||.+ .++.+||..+ +.|..+..+.
T Consensus 473 GG~~~~~~~~~~~~~~~v~~ydp~t-~~W~~~~~~~ 507 (656)
T 1k3i_A 473 GGQRRGIPFEDSTPVFTPEIYVPEQ-DTFYKQNPNS 507 (656)
T ss_dssp CCBSBCCTTCCCSBCCCCEEEEGGG-TEEEECCCCS
T ss_pred CCcccCcCcCCCCcccceEEEcCCC-CceeecCCCC
Confidence 9865 4689999655 6888766543
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.41 E-value=0.00013 Score=61.82 Aligned_cols=198 Identities=9% Similarity=-0.011 Sum_probs=121.1
Q ss_pred ceeeeeeecCCCCEEEEeeC--CCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc-CeEEEEecCCCCCcEEEEEECCC
Q psy2762 14 DMIHDAEMDYLGLYLATCSS--DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG-PVWQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s~s~--D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~~~~~~~~~~las~s~Dg 90 (318)
.....+.|++++.+.++.+. +++|++.|+. +++++.++..... ....+.+. .+.+.++.-.++
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~-----------tg~v~~~i~l~~~~fgeGi~~~---g~~lyv~t~~~~ 86 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQ-----------TGKVENIHKMDDSYFGEGLTLL---NEKLYQVVWLKN 86 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETT-----------TCCEEEEEECCTTCCEEEEEEE---TTEEEEEETTCS
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECC-----------CCCEEEEEecCCCcceEEEEEe---CCEEEEEEecCC
Confidence 45678999998876666654 6899999987 3566666542221 22345553 134444445578
Q ss_pred eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccc---ccee
Q psy2762 91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIG---CNAV 165 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~---v~~~ 165 (318)
.+.++|..+.+.+...... ... ...+++++ ..++++ ..++.|.++|..... ....+. .+..+ .+.+
T Consensus 87 ~v~viD~~t~~v~~~i~~g--~~~--g~glt~Dg-~~l~vs-~gs~~l~viD~~t~~---v~~~I~Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQ--MKD--GWGLATDG-KILYGS-DGTSILYEIDPHTFK---LIKKHNVKYNGHRVIRLNEL 157 (266)
T ss_dssp EEEEEETTTTEEEEEEECC--SSS--CCEEEECS-SSEEEE-CSSSEEEEECTTTCC---EEEEEECEETTEECCCEEEE
T ss_pred EEEEEECCCCcEEEEEECC--CCC--eEEEEECC-CEEEEE-CCCCeEEEEECCCCc---EEEEEEECCCCcccccceeE
Confidence 9999999887655544332 111 23456663 344544 467888888763322 122222 11112 3455
Q ss_pred eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC-----------CCCeeEEEEccCCCC
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH-----------SDWVRDVAWAPSWGL 234 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h-----------~~~V~~v~~sp~~~~ 234 (318)
.|. + +..++....++.|.+.|..+++......+.+. ....+.|+|+|+
T Consensus 158 e~~-d-----------------g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~--- 216 (266)
T 2iwa_A 158 EYI-N-----------------GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE--- 216 (266)
T ss_dssp EEE-T-----------------TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT---
T ss_pred EEE-C-----------------CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC---
Confidence 554 2 34456666678999999998876555544321 134689999997
Q ss_pred CccEEEEEeCCCeEEEEEcCC
Q psy2762 235 SKCMIASCSQDRKVIIWTSND 255 (318)
Q Consensus 235 ~~~~l~s~s~D~~i~vw~~~~ 255 (318)
...+++++....+|.+-++..
T Consensus 217 ~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 217 NKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTEEEEEETTCSEEEEEEEEE
T ss_pred CCEEEEECCCCCeEEEEEEec
Confidence 357888888888888887654
No 231
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.33 E-value=0.0003 Score=61.20 Aligned_cols=237 Identities=11% Similarity=0.042 Sum_probs=129.3
Q ss_pred ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec--------------------ccccCeEEEE
Q psy2762 14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK--------------------GHSGPVWQVA 73 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~--------------------~h~~~V~~v~ 73 (318)
.....++++++|+++.++..++.|..|+.... . +..+. ...+...+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~ 86 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNS-----------G-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDIS 86 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTT-----------C-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCC-----------c-eEEEecccccccccccccccchhccccCCCCceEE
Confidence 34677889999997788888999999987521 1 11111 1123577888
Q ss_pred ecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEE-ecC-CCcCeEEEEeeC-CCCCcEEEEeec----------------
Q psy2762 74 WAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE-YNN-HDSSVNSIAWAP-KEFGLILACGSS---------------- 134 (318)
Q Consensus 74 ~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~-~~~-h~~~v~~v~~~p-~~~~~~lasgs~---------------- 134 (318)
+.+ .++. |..+...+.|..+|..++....... ..+ .....+.+++.| + +.+.++-..
T Consensus 87 ~~~-~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~--G~l~v~d~~~~~~~~~~~~~~~~~~ 162 (322)
T 2fp8_A 87 YNL-QNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRT--GIVYFTDVSTLYDDRGVQQIMDTSD 162 (322)
T ss_dssp EET-TTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTT--CCEEEEESCSSCCTTCHHHHHHHTC
T ss_pred EcC-CCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCC--CEEEEECCcccccccccceehcccC
Confidence 853 1344 5555555568888876543212111 111 113468899998 7 445554322
Q ss_pred -CCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCC---e
Q psy2762 135 -DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGD---K 209 (318)
Q Consensus 135 -d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~---~ 209 (318)
++.|..++. ... ....+.......+.++++|+ +.. +++-..++.|++|++... +
T Consensus 163 ~~g~v~~~d~--~~~--~~~~~~~~~~~p~gia~~~d-----------------g~~lyv~d~~~~~I~~~~~~~~~~~~ 221 (322)
T 2fp8_A 163 KTGRLIKYDP--STK--ETTLLLKELHVPGGAEVSAD-----------------SSFVLVAEFLSHQIVKYWLEGPKKGT 221 (322)
T ss_dssp CCEEEEEEET--TTT--EEEEEEEEESCCCEEEECTT-----------------SSEEEEEEGGGTEEEEEESSSTTTTC
T ss_pred CCceEEEEeC--CCC--EEEEeccCCccCcceEECCC-----------------CCEEEEEeCCCCeEEEEECCCCcCCc
Confidence 244555543 211 11111111123456788876 333 444466688999987642 2
Q ss_pred EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC----------CCeEEEEEcCCCcceeeEEeeec----CCcEEEEE
Q psy2762 210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ----------DRKVIIWTSNDYVTWTPFIMNTF----DDVVWNVS 275 (318)
Q Consensus 210 ~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~----------D~~i~vw~~~~~~~~~~~~~~~~----~~~v~~v~ 275 (318)
......+. . ...+++.++ |.+.++... .+.|..++..... ...+... -..+..+.
T Consensus 222 ~~~~~~~~---g-P~gi~~d~~----G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~---~~~~~~~~g~~~~~~~~~~ 290 (322)
T 2fp8_A 222 AEVLVKIP---N-PGNIKRNAD----GHFWVSSSEELDGNMHGRVDPKGIKFDEFGNI---LEVIPLPPPFAGEHFEQIQ 290 (322)
T ss_dssp EEEEEECS---S-EEEEEECTT----SCEEEEEEEETTSSTTSCEEEEEEEECTTSCE---EEEEECCTTTTTSCCCEEE
T ss_pred cceEEeCC---C-CCCeEECCC----CCEEEEecCcccccccCCCccEEEEECCCCCE---EEEEECCCCCccccceEEE
Confidence 21112222 2 677889886 666666544 3567777764321 1222211 13466666
Q ss_pred EcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 276 WSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 276 ~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
+ .+|+++++....+.|..++...
T Consensus 291 ~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 291 E-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp E-ETTEEEEECSSCSEEEEEEC--
T ss_pred E-eCCEEEEeecCCCceEEEeccc
Confidence 6 4676666666778888887654
No 232
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.29 E-value=0.00023 Score=66.86 Aligned_cols=253 Identities=13% Similarity=0.021 Sum_probs=142.1
Q ss_pred CCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEE--EecccccCeEEEEecC-CCCCcEEEEEE-----------
Q psy2762 23 YLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIA--ELKGHSGPVWQVAWAH-PQFGTLLASCS----------- 87 (318)
Q Consensus 23 ~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~--~~~~h~~~V~~v~~~~-~~~~~~las~s----------- 87 (318)
+||++|+.+.. ++.|.+-|++. .++.. ++..- .....+++.. | ++++++.++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t-----------~~~~~ii~ip~g-~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDV-----------MKCDAILEIPNA-KGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTT-----------TEEEEEEECSSC-CSEEEEEECCSS-BCSEEEEEECSCEESSCSSS
T ss_pred cCCCEEEEEcCCCCEEEEEECCC-----------ceEeeEEeCCCC-CCCcceeeeecC-CCcEEEEecccccccCCCCc
Confidence 38888777665 55699999973 34444 44321 2356777643 4 477777774
Q ss_pred -------CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC---------------eEEEE----
Q psy2762 88 -------YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG---------------TISFL---- 141 (318)
Q Consensus 88 -------~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~---------------~i~i~---- 141 (318)
+++.+.+.|.++.+...+....+ ....++++|+ +.++.+.+.+. .|.+.
T Consensus 166 ~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg---~pd~~~~spd--Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~ 240 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKWEVAWQVLVSG---NLDNCDADYE--GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAE 240 (595)
T ss_dssp STTCGGGEEEEEEEEETTTTEEEEEEEESS---CCCCEEECSS--SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHH
T ss_pred ccccccccCceEEEEECCCCeEEEEEEeCC---CccceEECCC--CCEEEEEecCcccCcchhhccccccceEEEeeccc
Confidence 35689999998765433333322 3455778998 55555555442 23332
Q ss_pred -------------------EeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEE
Q psy2762 142 -------------------TYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI 202 (318)
Q Consensus 142 -------------------~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~i 202 (318)
|........-...+.. ......+.++|+. -..++++..+.+|.+
T Consensus 241 ~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDG----------------k~v~V~~~~s~~VsV 303 (595)
T 1fwx_A 241 IEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDK----------------KHLCVAGKLSPTVTV 303 (595)
T ss_dssp HHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTS----------------SEEEEECTTSSBEEE
T ss_pred eeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCC----------------CEEEEeCCCCCeEEE
Confidence 2211000000001110 0112345566652 135677778889999
Q ss_pred EEccCCeE----------EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc--------ceeeEEe
Q psy2762 203 WKQEGDKW----------IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV--------TWTPFIM 264 (318)
Q Consensus 203 wd~~~~~~----------~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~--------~~~~~~~ 264 (318)
+|+.+.+. ....+.+- ....+.+.|+|+ |...++.-.|.+|-+|+..... ......+
T Consensus 304 id~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~d----G~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~ki 378 (595)
T 1fwx_A 304 LDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGR----GNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKL 378 (595)
T ss_dssp EEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTT----SEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEE
T ss_pred EECcccccccccccCcccceEEEcCC-CCCcceEEECCC----CeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEe
Confidence 99875310 01122221 233678999996 6566777789999999986511 1122233
Q ss_pred eecCCcE-----EEEEEcCCCCEEEEEeC---CCe----------EEEEEECCCCceEEEeeeccccccc
Q psy2762 265 NTFDDVV-----WNVSWSLTGDILTVSCG---DNS----------VSLWKENTDGAWQCITEMGKTSEQR 316 (318)
Q Consensus 265 ~~~~~~v-----~~v~~spdg~~l~s~~~---D~~----------v~iW~~~~~~~~~~~~~~~~~~~~~ 316 (318)
..+-++- ...+++|||++|.++.. |+- -++.|+ .+++...+...--..||+
T Consensus 379 dV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~di-s~~~m~lv~d~p~~~ePh 447 (595)
T 1fwx_A 379 DVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDI-SGDKMVLVHDGPTFAEPH 447 (595)
T ss_dssp ECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEEC-SSSSCEEEEEEEESSCCC
T ss_pred ecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEc-CCCcEEEEEEEcCCCCCC
Confidence 3332221 22356899999999864 432 288998 566777666655444443
No 233
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.23 E-value=0.0019 Score=55.65 Aligned_cols=232 Identities=13% Similarity=-0.001 Sum_probs=124.5
Q ss_pred ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC-C-e
Q psy2762 14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD-R-K 91 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D-g-~ 91 (318)
.....++++++|+++++-..++.|..||.+. .....+. -.+....+++.+ +++++++.... + .
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g------------~~~~~~~-~~~~p~gia~~~--dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG------------NQQIHAT-VEGKVSGLAFTS--NGDLVATGWNADSIP 96 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC------------CEEEEEE-CSSEEEEEEECT--TSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC------------ceEEEEe-CCCCceeEEEcC--CCcEEEEeccCCcce
Confidence 4567899999999888877889998888652 2222222 234578888863 47765554332 2 3
Q ss_pred EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc---------ccccc
Q psy2762 92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA---------HTIGC 162 (318)
Q Consensus 92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~---------h~~~v 162 (318)
|..++..+++......+.. ......++..+. +.++++-..++.|..+|..... ..+..... .....
T Consensus 97 v~~~d~~~g~~~~~~~~~~-~~~~~g~~~~~~--~~~~v~d~~~g~i~~~d~~~~~--~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPD-AIFLNGITPLSD--TQYLTADSYRGAIWLIDVVQPS--GSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp EEEEECTTSCEEEEEECTT-CSCEEEEEESSS--SEEEEEETTTTEEEEEETTTTE--EEEEEECGGGSCSSTTCCSCSE
T ss_pred EEEEcCCCCeEEEEEeCCC-ccccCcccccCC--CcEEEEECCCCeEEEEeCCCCc--EeEEEECCccccccccCCCCcC
Confidence 5566666665444333321 223345554443 4455554457766665532110 01110000 00001
Q ss_pred ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762 163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241 (318)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s 241 (318)
+.+ +|+. ...+++-+..+.|.+++.+. +.......+.. ......++++++ |.++++
T Consensus 172 ngi--s~dg----------------~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~d----G~l~va 228 (306)
T 2p4o_A 172 NGL--KRFG----------------NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVE----GNLYGA 228 (306)
T ss_dssp EEE--EEET----------------TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTT----CCEEEE
T ss_pred CCc--CcCC----------------CEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCC----CCEEEE
Confidence 111 2221 23456666778899999764 22110111110 123567888886 677777
Q ss_pred EeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc---CCCCEEEEEeCC
Q psy2762 242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS---LTGDILTVSCGD 289 (318)
Q Consensus 242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s---pdg~~l~s~~~D 289 (318)
....+.|.+++...... .............+++|. ||++.|..+...
T Consensus 229 ~~~~~~V~~~~~~G~~~-~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 229 THIYNSVVRIAPDRSTT-IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CBTTCCEEEECTTCCEE-EEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred eCCCCeEEEECCCCCEE-EEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 66778899998753210 011111112468899999 898777666543
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.23 E-value=0.00034 Score=58.92 Aligned_cols=196 Identities=11% Similarity=0.079 Sum_probs=117.1
Q ss_pred eEEEEecccccC--eEEEEecCCCCCcEEEEEECCC--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEe
Q psy2762 57 TLIAELKGHSGP--VWQVAWAHPQFGTLLASCSYDR--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACG 132 (318)
Q Consensus 57 ~~~~~~~~h~~~--V~~v~~~~~~~~~~las~s~Dg--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasg 132 (318)
+++.++. |... ...+.|+ ++.++.|.+.+| .|++.|+.+++......+.. ......+++.. +.+.+..
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~---~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g---~~ly~lt 103 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR---NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWK---DKIVGLT 103 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE---TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEET---TEEEEEE
T ss_pred EEEEEec-CCCCcccceEEEE---CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeC---CEEEEEE
Confidence 3566663 4433 4678885 368888888877 99999999998666555432 11223344443 3566666
Q ss_pred ecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE
Q psy2762 133 SSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE 212 (318)
Q Consensus 133 s~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~ 212 (318)
..++.+.++|....+ .+..+.- ...-..++ ++ +..|+.+..++.|+++|..+.+...
T Consensus 104 w~~~~v~v~D~~t~~---~~~ti~~-~~eG~glt--~d-----------------g~~L~~SdGs~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 104 WKNGLGFVWNIRNLR---QVRSFNY-DGEGWGLT--HN-----------------DQYLIMSDGTPVLRFLDPESLTPVR 160 (262)
T ss_dssp SSSSEEEEEETTTCC---EEEEEEC-SSCCCCEE--EC-----------------SSCEEECCSSSEEEEECTTTCSEEE
T ss_pred eeCCEEEEEECccCc---EEEEEEC-CCCceEEe--cC-----------------CCEEEEECCCCeEEEEcCCCCeEEE
Confidence 678888898864332 1222221 11111222 22 2345555557889999988765444
Q ss_pred EEEcccCC---CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee----------ecCCcEEEEEEcCC
Q psy2762 213 ETKLENHS---DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN----------TFDDVVWNVSWSLT 279 (318)
Q Consensus 213 ~~~~~~h~---~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~----------~~~~~v~~v~~spd 279 (318)
........ ..++.+.|. + |...+..-.+..|.+.|..+........+. ...+..+.+||+|+
T Consensus 161 ~I~V~~~g~~~~~lNELe~~-~----G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 161 TITVTAHGEELPELNELEWV-D----GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp EEECEETTEECCCEEEEEEE-T----TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred EEEeccCCccccccceeEEE-C----CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 33332222 335667776 2 667776667888999998775421111111 11246799999999
Q ss_pred CCEEEEEeC
Q psy2762 280 GDILTVSCG 288 (318)
Q Consensus 280 g~~l~s~~~ 288 (318)
++.|..+|.
T Consensus 236 ~~~lfVTGK 244 (262)
T 3nol_A 236 HHRLFVTGK 244 (262)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEECC
Confidence 988888875
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.21 E-value=0.0019 Score=54.72 Aligned_cols=210 Identities=10% Similarity=0.022 Sum_probs=124.1
Q ss_pred ceEEEEeccccc--CeEEEEecCCCCCcEEEEEEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEE
Q psy2762 56 GTLIAELKGHSG--PVWQVAWAHPQFGTLLASCSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC 131 (318)
Q Consensus 56 ~~~~~~~~~h~~--~V~~v~~~~~~~~~~las~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~las 131 (318)
.+++.++. |.. ....+.|++ ++.++++.+. ++.|.+.|+.+++......+..+ .....+++.. +.+.++
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~--dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g---~~lyv~ 81 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAE--NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLLN---EKLYQV 81 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECS--TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEET---TEEEEE
T ss_pred ceEEEEEE-CCCCCCcccEEEeC--CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEeC---CEEEEE
Confidence 35666764 443 357899963 3666666553 58999999999886665544332 2233556653 356677
Q ss_pred eecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762 132 GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI 211 (318)
Q Consensus 132 gs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~ 211 (318)
...++.+.++|..... .+..+..... .....+++ ++.++.+..+++|.++|..+.+..
T Consensus 82 t~~~~~v~viD~~t~~---v~~~i~~g~~--~g~glt~D-----------------g~~l~vs~gs~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLS---NIKNFTHQMK--DGWGLATD-----------------GKILYGSDGTSILYEIDPHTFKLI 139 (266)
T ss_dssp ETTCSEEEEEETTTTE---EEEEEECCSS--SCCEEEEC-----------------SSSEEEECSSSEEEEECTTTCCEE
T ss_pred EecCCEEEEEECCCCc---EEEEEECCCC--CeEEEEEC-----------------CCEEEEECCCCeEEEEECCCCcEE
Confidence 7788899998863221 1222221101 11222232 233444456889999999886544
Q ss_pred EEEEcccCC---CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec-----------CCcEEEEEEc
Q psy2762 212 EETKLENHS---DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-----------DDVVWNVSWS 277 (318)
Q Consensus 212 ~~~~~~~h~---~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~-----------~~~v~~v~~s 277 (318)
.......+. ..++.+.|. + +...+....+..|.+-|..+........+.+. ....+.++|+
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~-d----g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYI-N----GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EEEECEETTEECCCEEEEEEE-T----TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred EEEEECCCCcccccceeEEEE-C----CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 333332221 236778887 3 66667776788999999987542111111111 1357899999
Q ss_pred CCCCEEEEEe-CCCeEEEEEECC
Q psy2762 278 LTGDILTVSC-GDNSVSLWKENT 299 (318)
Q Consensus 278 pdg~~l~s~~-~D~~v~iW~~~~ 299 (318)
|+++.|..++ ..+.|..-++..
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCCEEEEECCCCCeEEEEEEec
Confidence 9987766665 566776666544
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.19 E-value=0.0004 Score=58.50 Aligned_cols=183 Identities=13% Similarity=0.156 Sum_probs=108.4
Q ss_pred cceeeeeeecCCCCEEEEeeCCC--cEEEEEcCCCcCCCCCCCCcceEEEEecccccC-eEEEEecCCCCCcEEEEE-EC
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDH--TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLASC-SY 88 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~~~~~~~~las~-s~ 88 (318)
......+.|+ ++.+..|.|.+| .|+++|++ +++++..+...... ...+... ++.|... -.
T Consensus 42 ~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~-----------Tgkv~~~~~l~~~~FgeGit~~----g~~ly~ltw~ 105 (262)
T 3nol_A 42 KAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIE-----------SGKTLQQIELGKRYFGEGISDW----KDKIVGLTWK 105 (262)
T ss_dssp TCEEEEEEEE-TTEEEEEEEETTEEEEEEECTT-----------TCCEEEEEECCTTCCEEEEEEE----TTEEEEEESS
T ss_pred CcccceEEEE-CCEEEEECCCCCCceEEEEECC-----------CCcEEEEEecCCccceeEEEEe----CCEEEEEEee
Confidence 3455778888 778888888876 89999986 45666666543322 1234442 3344444 45
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccc---cc
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIG---CN 163 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~---v~ 163 (318)
++.+.++|..+.+.+..+...+. ...+++++ ..++ ....++.|.++|..... ....+. ....+ ++
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~e-----G~glt~dg-~~L~-~SdGs~~i~~iDp~T~~---v~~~I~V~~~g~~~~~lN 175 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDGE-----GWGLTHND-QYLI-MSDGTPVLRFLDPESLT---PVRTITVTAHGEELPELN 175 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSSC-----CCCEEECS-SCEE-ECCSSSEEEEECTTTCS---EEEEEECEETTEECCCEE
T ss_pred CCEEEEEECccCcEEEEEECCCC-----ceEEecCC-CEEE-EECCCCeEEEEcCCCCe---EEEEEEeccCCccccccc
Confidence 88999999988876665554331 12334553 3344 44446778887753322 122222 11112 23
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC----------CCCeeEEEEccCCC
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH----------SDWVRDVAWAPSWG 233 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h----------~~~V~~v~~sp~~~ 233 (318)
.+.|.. +..+|..-.++.|.+.|.++++......+.+- .+..+.|+|+|+
T Consensus 176 ELe~~~------------------G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~-- 235 (262)
T 3nol_A 176 ELEWVD------------------GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE-- 235 (262)
T ss_dssp EEEEET------------------TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT--
T ss_pred eeEEEC------------------CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC--
Confidence 455542 34556666778999999999876555554321 134589999997
Q ss_pred CCccEEEEE
Q psy2762 234 LSKCMIASC 242 (318)
Q Consensus 234 ~~~~~l~s~ 242 (318)
...++++|
T Consensus 236 -~~~lfVTG 243 (262)
T 3nol_A 236 -HHRLFVTG 243 (262)
T ss_dssp -TTEEEEEE
T ss_pred -CCEEEEEC
Confidence 35566655
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.10 E-value=0.0007 Score=57.07 Aligned_cols=195 Identities=8% Similarity=0.022 Sum_probs=117.0
Q ss_pred eEEEEecccc--cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762 57 TLIAELKGHS--GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS 134 (318)
Q Consensus 57 ~~~~~~~~h~--~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~ 134 (318)
+++.++ -|. .....+.|. .+.++.|.+.+|.|++.|+++++..... +.. ......+++.. +.+.+....
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~---~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g---~~Ly~ltw~ 114 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH---QGHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDG---ERLYQLTWT 114 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE---TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECS---SCEEEEESS
T ss_pred EEEEEE-cCCCccccceEEEE---CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeC---CEEEEEEcc
Confidence 455666 343 334688885 3688889999999999999998765544 442 21223355543 355666677
Q ss_pred CCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE
Q psy2762 135 DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET 214 (318)
Q Consensus 135 d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~ 214 (318)
++.+.++|....+ .+..+.. ...-..++ ++ ++.|+.+..++.|+++|..+.+.....
T Consensus 115 ~~~v~V~D~~Tl~---~~~ti~~-~~eGwGLt--~D-----------------g~~L~vSdGs~~l~~iDp~T~~v~~~I 171 (268)
T 3nok_A 115 EGLLFTWSGMPPQ---RERTTRY-SGEGWGLC--YW-----------------NGKLVRSDGGTMLTFHEPDGFALVGAV 171 (268)
T ss_dssp SCEEEEEETTTTE---EEEEEEC-SSCCCCEE--EE-----------------TTEEEEECSSSEEEEECTTTCCEEEEE
T ss_pred CCEEEEEECCcCc---EEEEEeC-CCceeEEe--cC-----------------CCEEEEECCCCEEEEEcCCCCeEEEEE
Confidence 8889898863322 1122211 11111222 11 244555556889999998887654444
Q ss_pred EcccCCC---CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee-----------ecCCcEEEEEEcCCC
Q psy2762 215 KLENHSD---WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN-----------TFDDVVWNVSWSLTG 280 (318)
Q Consensus 215 ~~~~h~~---~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~-----------~~~~~v~~v~~spdg 280 (318)
....+.. .++.+.|.. |...+..-.+..|.+-|..+........+. ...+..+.+||+|++
T Consensus 172 ~V~~~g~~v~~lNeLe~~d-----G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~ 246 (268)
T 3nok_A 172 QVKLRGQPVELINELECAN-----GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS 246 (268)
T ss_dssp ECEETTEECCCEEEEEEET-----TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT
T ss_pred EeCCCCcccccccccEEeC-----CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC
Confidence 3333322 356778873 667776667889999998775421111111 112468999999988
Q ss_pred CEEEEEeC
Q psy2762 281 DILTVSCG 288 (318)
Q Consensus 281 ~~l~s~~~ 288 (318)
+.|..++.
T Consensus 247 ~rlfVTGK 254 (268)
T 3nok_A 247 GRIFMTGK 254 (268)
T ss_dssp CCEEEEET
T ss_pred CEEEEeCC
Confidence 77776663
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.09 E-value=0.0015 Score=63.23 Aligned_cols=109 Identities=16% Similarity=0.157 Sum_probs=58.9
Q ss_pred CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc----------Ce-EEEEecCCCCCcEEEEEECCCeEE
Q psy2762 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG----------PV-WQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~----------~V-~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
+..|+.++.++.|..+|..+ |+.+=.+..+.. .+ ..+.. .+..++.++.|+.|.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~t-----------G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~v~v~~~dg~l~ 134 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARD-----------GRLIWKYDPQSDRHRAGEACCDAVNRGVAV----WKGKVYVGVLDGRLE 134 (689)
T ss_dssp TTEEEEECGGGCEEEEETTT-----------CCEEEEECCCCCGGGGGGCTTCSCCCCCEE----ETTEEEEECTTSEEE
T ss_pred CCEEEEEcCCCeEEEEECCC-----------CceeEEEcCCCCccccccccccCCCCccEE----ECCEEEEEccCCEEE
Confidence 55677778889999999863 444433332211 11 11222 246788889999999
Q ss_pred EEeCCCCcEEEEEEecCCCcCeEEEEeeC---CCCCcEEEEee-----cCCeEEEEEeecCCCCc
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS-----SDGTISFLTYMSDTNSW 150 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p---~~~~~~lasgs-----~d~~i~i~~~~~~~~~~ 150 (318)
.+|..+++..=.+....+......+..+| + +.+++..+ .++.|..+|..+++..|
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~--g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRVVN--GKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp EEETTTCCEEEEEECCSCTTSCCBCCSCCEEET--TEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEECCCCCEeeeecCcCCCCCCccccCCcEEEC--CEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 99999887432222210111111111122 2 34443322 36788888876655433
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.08 E-value=0.00089 Score=57.83 Aligned_cols=217 Identities=14% Similarity=0.053 Sum_probs=117.7
Q ss_pred CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEE
Q psy2762 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFK 104 (318)
Q Consensus 25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~ 104 (318)
+..|..++.++.|..+|.. ++.......+...+.++... .++. |..++.++.+..+|.. +....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~------------g~~~~~~~~~~~~~~~~~~~--~~g~-l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD------------GTEKWRFKTKKAIYATPIVS--EDGT-IYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp TTEEEEECTTSEEEEECTT------------SCEEEEEECSSCCCSCCEEC--TTSC-EEEECTTSEEEEECTT-SCEEE
T ss_pred CCEEEEEecCCEEEEEcCC------------CCEEEEEcCCCceeeeeEEc--CCCE-EEEEcCCCEEEEECCC-CCEeE
Confidence 3345556667777777754 22333333344444455443 2344 6667788999999988 55333
Q ss_pred EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCC
Q psy2762 105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184 (318)
Q Consensus 105 ~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~ 184 (318)
. +......+.++...++ +.+.+. + +.|..++ .... ...........+.++...++
T Consensus 171 ~--~~~~~~~~~~~~~d~~--g~l~v~-t--~~l~~~d-~~g~---~~~~~~~~~~~~~~~~~~~~-------------- 225 (330)
T 3hxj_A 171 R--FKTNDAITSAASIGKD--GTIYFG-S--DKVYAIN-PDGT---EKWNFYAGYWTVTRPAISED-------------- 225 (330)
T ss_dssp E--EECSSCCCSCCEECTT--CCEEEE-S--SSEEEEC-TTSC---EEEEECCSSCCCSCCEECTT--------------
T ss_pred E--EecCCCceeeeEEcCC--CEEEEE-e--CEEEEEC-CCCc---EEEEEccCCcceeceEECCC--------------
Confidence 3 3333445666666555 444443 3 5666665 2222 11111122223444444432
Q ss_pred CCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe
Q psy2762 185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM 264 (318)
Q Consensus 185 ~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~ 264 (318)
+ .|..++.++.|..+|...... . .+......+..+...++ + .|..++.++.|..++......+ ..
T Consensus 226 ---g-~l~v~t~~~gl~~~~~~g~~~-~--~~~~~~~~~~~~~~~~~----g-~l~v~t~~ggl~~~d~~g~~~~---~~ 290 (330)
T 3hxj_A 226 ---G-TIYVTSLDGHLYAINPDGTEK-W--RFKTGKRIESSPVIGNT----D-TIYFGSYDGHLYAINPDGTEKW---NF 290 (330)
T ss_dssp ---S-CEEEEETTTEEEEECTTSCEE-E--EEECSSCCCSCCEECTT----S-CEEEECTTCEEEEECTTSCEEE---EE
T ss_pred ---C-eEEEEcCCCeEEEECCCCCEe-E--EeeCCCCccccceEcCC----C-eEEEecCCCCEEEECCCCcEEE---EE
Confidence 2 466677788888888644332 2 22223333344555442 3 4667778888999986432222 11
Q ss_pred eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 265 ~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~ 298 (318)
......+.++...++|++. .++.+|.+++....
T Consensus 291 ~~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 291 ETGSWIIATPVIDENGTIY-FGTRNGKFYALFNL 323 (330)
T ss_dssp ECSSCCCSCCEECTTCCEE-EECTTSCEEEEEC-
T ss_pred EcCCccccceEEcCCCEEE-EEcCCCeEEEEecc
Confidence 1123456677777888755 57788998887643
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.08 E-value=0.0011 Score=58.75 Aligned_cols=228 Identities=14% Similarity=0.080 Sum_probs=120.9
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEE
Q psy2762 24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF 103 (318)
Q Consensus 24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~ 103 (318)
++..++.++.|+.|..+|..+ ++.+-.............. .+..++.++.++.|..+|..+++..
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~t-----------G~~~W~~~~~~~~~~~p~~----~~~~v~v~~~~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSD-----------GTVAWQTKVAGEALSRPVV----SDGLVLIHTSNGQLQALNEADGAVK 166 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTT-----------CCEEEEEECSSCCCSCCEE----ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred eCCEEEEEcCCCEEEEEECCC-----------CCEEEEEeCCCceEcCCEE----ECCEEEEEcCCCeEEEEECCCCcEE
Confidence 455677788899999999862 4444333322211111122 1457788889999999999888643
Q ss_pred EEEEecCCCc---CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc-----ccceeeeCCCCCCCc
Q psy2762 104 KYYEYNNHDS---SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI-----GCNAVSWGPGIGSLS 175 (318)
Q Consensus 104 ~~~~~~~h~~---~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~~~ 175 (318)
-......... ........ + + .+..++.++.|..+|...+...|... ...... .+..+.-.|.
T Consensus 167 W~~~~~~~~~~~~~~~~~~~~-~--~-~v~~g~~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~----- 236 (376)
T 3q7m_A 167 WTVNLDMPSLSLRGESAPTTA-F--G-AAVVGGDNGRVSAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPV----- 236 (376)
T ss_dssp EEEECCC-----CCCCCCEEE-T--T-EEEECCTTTEEEEEETTTCCEEEEEE-CCC-----------CCCCCCE-----
T ss_pred EEEeCCCCceeecCCCCcEEE-C--C-EEEEEcCCCEEEEEECCCCcEEEEEe-cccCCCCcccccccccCCCcE-----
Confidence 2222211100 00111222 2 2 46667788888888765443222211 000000 0000111110
Q ss_pred cccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~ 255 (318)
-. +..+..++.++.|..+|..+++..-.... .....+... +..|..++.++.|..+|..+
T Consensus 237 ---------~~-~~~v~~~~~~g~l~~~d~~tG~~~w~~~~----~~~~~~~~~------~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 237 ---------VV-NGVVFALAYNGNLTALDLRSGQIMWKREL----GSVNDFIVD------GNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp ---------EE-TTEEEEECTTSCEEEEETTTCCEEEEECC----CCEEEEEEE------TTEEEEEETTCCEEEEETTT
T ss_pred ---------EE-CCEEEEEecCcEEEEEECCCCcEEeeccC----CCCCCceEE------CCEEEEEcCCCeEEEEECCC
Confidence 00 23577788899999999988764322221 123333332 34677788899999999876
Q ss_pred Ccc-eeeEEeeecC-CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 256 YVT-WTPFIMNTFD-DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 256 ~~~-~~~~~~~~~~-~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
... |. ..... ..+.+... .+..|..++.+|.|.++|..++.
T Consensus 297 G~~~w~---~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 297 GVTLWT---QSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp CCEEEE---ECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred CcEEEe---ecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCc
Confidence 541 21 11011 11111222 24577788889999999977654
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.06 E-value=0.0038 Score=52.44 Aligned_cols=239 Identities=11% Similarity=-0.010 Sum_probs=128.2
Q ss_pred CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEE
Q psy2762 26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKY 105 (318)
Q Consensus 26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~ 105 (318)
.+|+.+.. +.|+.++++.... ........+........+++|.+ ..+.++++-...+.|..+++........
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~------~~~~~~~~~~~~~~~~~gi~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 73 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTM------KKTEAKAFLHIPAKVIIGLAFDC-VDKVVYWTDISEPSIGRASLHGGEPTTI 73 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCB------CGGGCEEEEEEEEEEEEEEEEET-TTTEEEEEETTTTEEEEEESSSCCCEEE
T ss_pred cEEEEEcC-CeEEEEEecCccc------ccccceeeecCCCCcEEEEEEec-CCCEEEEEECCCCEEEEEecCCCCcEEE
Confidence 34444443 4788888863210 00000111222234567889864 2355555655678999999876542222
Q ss_pred EEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCC
Q psy2762 106 YEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKL 184 (318)
Q Consensus 106 ~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~ 184 (318)
+...-.....+++.|+. +.++++-...+.|.+++... .. ...+. ........++++|+.
T Consensus 74 --~~~~~~~p~~ia~d~~~-~~lyv~d~~~~~I~~~~~~g-~~---~~~~~~~~~~~P~~i~vd~~~------------- 133 (267)
T 1npe_A 74 --IRQDLGSPEGIALDHLG-RTIFWTDSQLDRIEVAKMDG-TQ---RRVLFDTGLVNPRGIVTDPVR------------- 133 (267)
T ss_dssp --ECTTCCCEEEEEEETTT-TEEEEEETTTTEEEEEETTS-CS---CEEEECSSCSSEEEEEEETTT-------------
T ss_pred --EECCCCCccEEEEEecC-CeEEEEECCCCEEEEEEcCC-CC---EEEEEECCCCCccEEEEeeCC-------------
Confidence 22222467899999863 45666666677888777521 11 11111 111234567777742
Q ss_pred CCccceEEEecC--CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE
Q psy2762 185 GGVAKRLVSGGC--DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF 262 (318)
Q Consensus 185 ~~~~~~lasgs~--d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~ 262 (318)
+..+++... .+.|..++++........ .......+.++++|+ .+.+.++-...+.|.+++..+... ..
T Consensus 134 ---g~lyv~~~~~~~~~I~~~~~dg~~~~~~~--~~~~~~P~gia~d~~---~~~lyv~d~~~~~I~~~~~~g~~~--~~ 203 (267)
T 1npe_A 134 ---GNLYWTDWNRDNPKIETSHMDGTNRRILA--QDNLGLPNGLTFDAF---SSQLCWVDAGTHRAECLNPAQPGR--RK 203 (267)
T ss_dssp ---TEEEEEECCSSSCEEEEEETTSCCCEEEE--CTTCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTEEEE--EE
T ss_pred ---CEEEEEECCCCCcEEEEEecCCCCcEEEE--ECCCCCCcEEEEcCC---CCEEEEEECCCCEEEEEecCCCce--EE
Confidence 222333322 467888887654321111 122245789999996 345556666678899999865321 11
Q ss_pred EeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCceEE
Q psy2762 263 IMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQC 305 (318)
Q Consensus 263 ~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~~~~ 305 (318)
..... .....++.. +..|..+. ..+.|..++...+...+.
T Consensus 204 ~~~~~-~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 204 VLEGL-QYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp EEECC-CSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EecCC-CCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEE
Confidence 12222 234566654 44555454 567888888655433333
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.05 E-value=0.0055 Score=54.15 Aligned_cols=229 Identities=13% Similarity=0.114 Sum_probs=121.9
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc---------ccCeE-EEEecCCCCCcEEEEEECCCeEE
Q psy2762 24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH---------SGPVW-QVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h---------~~~V~-~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
.+..++.++.++.|..+|.++ ++.+-..... ...+. .+.. ++..++.++.|+.|.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~t-----------G~~~W~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~v~~~~g~l~ 116 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADD-----------GKEIWSVSLAEKDGWFSKEPALLSGGVTV----SGGHVYIGSEKAQVY 116 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTT-----------CCEEEEEECCC---CCSCCCCCEEEEEEE----ETTEEEEEETTSEEE
T ss_pred ECCEEEEEcCCCeEEEEEccC-----------CceeeeecCccccccccccCcccccCceE----eCCEEEEEcCCCEEE
Confidence 456777788899999999863 3333222221 12222 2222 256778888999999
Q ss_pred EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee--eeCCCC
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV--SWGPGI 171 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~--~~~p~~ 171 (318)
.+|..+++.. ++.............. + + .+..++.++.|..+|...++..|.. .. ..++... ...|.
T Consensus 117 a~d~~tG~~~--W~~~~~~~~~~~p~~~-~--~-~v~v~~~~g~l~~~d~~tG~~~W~~---~~-~~~~~~~~~~~~~~- 185 (376)
T 3q7m_A 117 ALNTSDGTVA--WQTKVAGEALSRPVVS-D--G-LVLIHTSNGQLQALNEADGAVKWTV---NL-DMPSLSLRGESAPT- 185 (376)
T ss_dssp EEETTTCCEE--EEEECSSCCCSCCEEE-T--T-EEEEECTTSEEEEEETTTCCEEEEE---EC-CC-----CCCCCCE-
T ss_pred EEECCCCCEE--EEEeCCCceEcCCEEE-C--C-EEEEEcCCCeEEEEECCCCcEEEEE---eC-CCCceeecCCCCcE-
Confidence 9999888743 3333222211111222 2 2 4666778888888886544422221 11 1111000 00010
Q ss_pred CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCC-----CeeEEEEccCCCCCccEEEEEeCCC
Q psy2762 172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD-----WVRDVAWAPSWGLSKCMIASCSQDR 246 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~-----~V~~v~~sp~~~~~~~~l~s~s~D~ 246 (318)
-. +..++.++.++.|..+|..+++..-......... .+..+.-.|-. .+..+..++.++
T Consensus 186 -------------~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g 249 (376)
T 3q7m_A 186 -------------TA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNG 249 (376)
T ss_dssp -------------EE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTS
T ss_pred -------------EE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCc
Confidence 00 1357788889999999988776432222221100 00001111110 134567777899
Q ss_pred eEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 247 KVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 247 ~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
.+..+|..+.. .|.. . ......+.. ++..|..++.++.|..+|..++.
T Consensus 250 ~l~~~d~~tG~~~w~~----~-~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 250 NLTALDLRSGQIMWKR----E-LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp CEEEEETTTCCEEEEE----C-CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCC
T ss_pred EEEEEECCCCcEEeec----c-CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCc
Confidence 99999987643 1211 1 122333333 45677778888999999977654
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.99 E-value=0.0013 Score=55.49 Aligned_cols=182 Identities=8% Similarity=0.005 Sum_probs=107.6
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCe--EEEEecCCCCCcEEEEEECCC
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV--WQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V--~~v~~~~~~~~~~las~s~Dg 90 (318)
......+.|+ ++.+.++.+.+|.|+++|+++ ++++..+ .. ... ..+.+. .+.+....-.++
T Consensus 54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~T-----------gkv~~~~-l~-~~~FgeGit~~---g~~Ly~ltw~~~ 116 (268)
T 3nok_A 54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLES-----------AQPVWME-RL-GNIFAEGLASD---GERLYQLTWTEG 116 (268)
T ss_dssp TCCEEEEEEE-TTEEEEEETTTTEEEECCSSC-----------SSCSEEE-EC-TTCCEEEEEEC---SSCEEEEESSSC
T ss_pred ccccceEEEE-CCEEEEEcCCCCEEEEEECCC-----------CcEEeEE-CC-CCcceeEEEEe---CCEEEEEEccCC
Confidence 3445678886 467788888999999999873 3444444 11 222 235542 234555555689
Q ss_pred eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccc---ccee
Q psy2762 91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIG---CNAV 165 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~---v~~~ 165 (318)
.+.++|..+.+.+..+...+. -..++ ++ +..|..+..++.|.++|....+ ....+. .+..+ ++.+
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~~e---GwGLt--~D--g~~L~vSdGs~~l~~iDp~T~~---v~~~I~V~~~g~~v~~lNeL 186 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYSGE---GWGLC--YW--NGKLVRSDGGTMLTFHEPDGFA---LVGAVQVKLRGQPVELINEL 186 (268)
T ss_dssp EEEEEETTTTEEEEEEECSSC---CCCEE--EE--TTEEEEECSSSEEEEECTTTCC---EEEEEECEETTEECCCEEEE
T ss_pred EEEEEECCcCcEEEEEeCCCc---eeEEe--cC--CCEEEEECCCCEEEEEcCCCCe---EEEEEEeCCCCccccccccc
Confidence 999999998876655554322 23343 44 3334444557888888754332 122222 22222 2344
Q ss_pred eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-----------CCCCeeEEEEccCCCC
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-----------HSDWVRDVAWAPSWGL 234 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-----------h~~~V~~v~~sp~~~~ 234 (318)
.|.. +..+|..-.++.|.+.|.++++......+.+ -.+..+.|+|+|+
T Consensus 187 e~~d------------------G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~--- 245 (268)
T 3nok_A 187 ECAN------------------GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG--- 245 (268)
T ss_dssp EEET------------------TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT---
T ss_pred EEeC------------------CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC---
Confidence 4442 3455666667899999999887655554431 1235689999997
Q ss_pred CccEEEEE
Q psy2762 235 SKCMIASC 242 (318)
Q Consensus 235 ~~~~l~s~ 242 (318)
..++++||
T Consensus 246 ~~rlfVTG 253 (268)
T 3nok_A 246 SGRIFMTG 253 (268)
T ss_dssp TCCEEEEE
T ss_pred CCEEEEeC
Confidence 35677766
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.98 E-value=0.0036 Score=52.10 Aligned_cols=197 Identities=11% Similarity=0.030 Sum_probs=117.3
Q ss_pred ceEEEEecccc--cCeEEEEecCCCCCcEEEEEECCC--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEE
Q psy2762 56 GTLIAELKGHS--GPVWQVAWAHPQFGTLLASCSYDR--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC 131 (318)
Q Consensus 56 ~~~~~~~~~h~--~~V~~v~~~~~~~~~~las~s~Dg--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~las 131 (318)
.+++.++ -|. .....+.|. + +.++.|.+.+| .|++.|+.+++......+..+. .-..+++.. +++...
T Consensus 9 ~~v~~~~-phd~~~ftqGL~~~-~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~---~~ly~l 80 (243)
T 3mbr_X 9 YRVVKRY-PHDTTAFTEGLFYL-R--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWR---DRLIQL 80 (243)
T ss_dssp EEEEEEE-ECCTTCCEEEEEEE-T--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEET---TEEEEE
T ss_pred eEEEEEc-CCCCccccccEEEE-C--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeC---CEEEEE
Confidence 3456666 465 336689985 2 67778877764 9999999999876655554321 223344443 456666
Q ss_pred eecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762 132 GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI 211 (318)
Q Consensus 132 gs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~ 211 (318)
...++.+.++|....+ .+..+. ....-..++ ++ +..|..+..++.|.++|..+.+..
T Consensus 81 tw~~~~v~v~D~~tl~---~~~ti~-~~~~Gwglt--~d-----------------g~~L~vSdgs~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLT---PRARFR-YPGEGWALT--SD-----------------DSHLYMSDGTAVIRKLDPDTLQQV 137 (243)
T ss_dssp ESSSSEEEEEETTTTE---EEEEEE-CSSCCCEEE--EC-----------------SSCEEEECSSSEEEEECTTTCCEE
T ss_pred EeeCCEEEEEECCcCc---EEEEEe-CCCCceEEe--eC-----------------CCEEEEECCCCeEEEEeCCCCeEE
Confidence 7778899898863322 112222 111112222 22 234444555889999998887544
Q ss_pred EEEEcccCC---CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee-----------ecCCcEEEEEEc
Q psy2762 212 EETKLENHS---DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN-----------TFDDVVWNVSWS 277 (318)
Q Consensus 212 ~~~~~~~h~---~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~-----------~~~~~v~~v~~s 277 (318)
.......+. ..++.+.|.. |...+..-.+..|.+-|..+........+. ...+..+.+||+
T Consensus 138 ~~I~V~~~g~~~~~lNeLe~~~-----G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d 212 (243)
T 3mbr_X 138 GSIKVTAGGRPLDNLNELEWVN-----GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFD 212 (243)
T ss_dssp EEEECEETTEECCCEEEEEEET-----TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEE
T ss_pred EEEEEccCCcccccceeeEEeC-----CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEc
Confidence 443333222 2356777763 666766666788999988775421111111 112467999999
Q ss_pred CCCCEEEEEeC
Q psy2762 278 LTGDILTVSCG 288 (318)
Q Consensus 278 pdg~~l~s~~~ 288 (318)
|+++.|..++.
T Consensus 213 ~~~~~lfVTGK 223 (243)
T 3mbr_X 213 AEHDRLFVTGK 223 (243)
T ss_dssp TTTTEEEEEET
T ss_pred CCCCEEEEECC
Confidence 99888777764
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.98 E-value=0.0017 Score=62.77 Aligned_cols=104 Identities=14% Similarity=0.131 Sum_probs=58.1
Q ss_pred CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc----------Ce-EEEEecCCCCCcEEEEEECCCeEE
Q psy2762 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG----------PV-WQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~----------~V-~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
+..|+.++.++.|.-+|.. +|+.+=.+..... .+ ..+.+ .+..++.++.|+.+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~-----------tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~----~~~~v~v~~~dg~l~ 141 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTR-----------TGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL----WKGKVYVGAWDGRLI 141 (677)
T ss_dssp TTEEEEECGGGCEEEEETT-----------TTEEEEEECCCCCGGGGGGSSSCSCCCCCEE----ETTEEEEECTTSEEE
T ss_pred CCEEEEECCCCeEEEEECC-----------CCcEEEEEcCCCCccccccccccCCCCCceE----ECCEEEEEcCCCEEE
Confidence 4556667778899999986 3454433332211 01 12232 256788889999999
Q ss_pred EEeCCCCcEEEEEEecCC-C----cCeE-EEEeeCCCCCcEEEEee-----cCCeEEEEEeecCCC
Q psy2762 94 IWRGDNGNWFKYYEYNNH-D----SSVN-SIAWAPKEFGLILACGS-----SDGTISFLTYMSDTN 148 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h-~----~~v~-~v~~~p~~~~~~lasgs-----~d~~i~i~~~~~~~~ 148 (318)
.+|..+++. .+++..+ . ..+. ...+. + +.+++..+ .++.|..+|..+++.
T Consensus 142 alD~~tG~~--~W~~~~~~~~~~~~~~~~~p~v~-~--~~v~v~~~~~~~~~~g~v~a~D~~tG~~ 202 (677)
T 1kb0_A 142 ALDAATGKE--VWHQNTFEGQKGSLTITGAPRVF-K--GKVIIGNGGAEYGVRGYITAYDAETGER 202 (677)
T ss_dssp EEETTTCCE--EEEEETTTTCCSSCBCCSCCEEE-T--TEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred EEECCCCCE--EeeecCCcCcCcCcccccCcEEE-C--CEEEEEecccccCCCCEEEEEECCCCcE
Confidence 999998874 3444332 1 1111 11111 2 34443332 268888888765553
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.97 E-value=0.0049 Score=51.31 Aligned_cols=184 Identities=10% Similarity=0.053 Sum_probs=107.9
Q ss_pred cceeeeeeecCCCCEEEEeeCCC--cEEEEEcCCCcCCCCCCCCcceEEEEecccccC-eEEEEecCCCCCcEEEEEECC
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDH--TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLASCSYD 89 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~~~~~~~~las~s~D 89 (318)
......+.|+. +.+..|.+.+| .|+++|++ +++++......... --.+... .+.+....-.+
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~-----------tgkv~~~~~l~~~~fgeGi~~~---~~~ly~ltw~~ 84 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLE-----------TGRILQRAEVPPPYFGAGIVAW---RDRLIQLTWRN 84 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETT-----------TCCEEEEEECCTTCCEEEEEEE---TTEEEEEESSS
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECC-----------CCCEEEEEeCCCCcceeEEEEe---CCEEEEEEeeC
Confidence 34566788876 67777777764 89999997 45666665433222 1234442 24455555568
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccc---cce
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIG---CNA 164 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~---v~~ 164 (318)
+.+.++|..+.+.+..+...+ .-..+ .+++ ..++++ ..++.|.++|....+ ....+. .+..+ ++.
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~---~Gwgl--t~dg-~~L~vS-dgs~~l~~iDp~t~~---~~~~I~V~~~g~~~~~lNe 154 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPG---EGWAL--TSDD-SHLYMS-DGTAVIRKLDPDTLQ---QVGSIKVTAGGRPLDNLNE 154 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSS---CCCEE--EECS-SCEEEE-CSSSEEEEECTTTCC---EEEEEECEETTEECCCEEE
T ss_pred CEEEEEECCcCcEEEEEeCCC---CceEE--eeCC-CEEEEE-CCCCeEEEEeCCCCe---EEEEEEEccCCccccccee
Confidence 999999998877655555433 22334 4553 344444 457788888754322 122222 22222 234
Q ss_pred eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-----------CCCCeeEEEEccCCC
Q psy2762 165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-----------HSDWVRDVAWAPSWG 233 (318)
Q Consensus 165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-----------h~~~V~~v~~sp~~~ 233 (318)
+.|.. +..+|..-.+..|.+.|..+++......+.+ -.+..+.|+|+|+
T Consensus 155 Le~~~------------------G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~-- 214 (243)
T 3mbr_X 155 LEWVN------------------GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE-- 214 (243)
T ss_dssp EEEET------------------TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT--
T ss_pred eEEeC------------------CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC--
Confidence 44432 3445555567789999999887655544432 1134689999997
Q ss_pred CCccEEEEE
Q psy2762 234 LSKCMIASC 242 (318)
Q Consensus 234 ~~~~~l~s~ 242 (318)
..+++++|
T Consensus 215 -~~~lfVTG 222 (243)
T 3mbr_X 215 -HDRLFVTG 222 (243)
T ss_dssp -TTEEEEEE
T ss_pred -CCEEEEEC
Confidence 35666666
No 247
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.97 E-value=0.0058 Score=51.34 Aligned_cols=222 Identities=12% Similarity=0.013 Sum_probs=122.3
Q ss_pred eeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762 15 MIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 15 ~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
.+..+++++++. ++++...++.|.+++++.. .....+.........+++.+ ..+.++++-...+.|.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~-----------~~~~~~~~~~~~p~~ia~d~-~~~~lyv~d~~~~~I~ 104 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGG-----------EPTTIIRQDLGSPEGIALDH-LGRTIFWTDSQLDRIE 104 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSC-----------CCEEEECTTCCCEEEEEEET-TTTEEEEEETTTTEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCC-----------CcEEEEECCCCCccEEEEEe-cCCeEEEEECCCCEEE
Confidence 456888998655 4555556789999998632 11122222224567888863 2345555555678999
Q ss_pred EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec--CCeEEEEEeecCCCCcceeeec-ccccccceeeeCCC
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS--DGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPG 170 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~--d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~ 170 (318)
++++........ ..........+++.|++ +.++++... .+.|..+++. +.. ...+. ........++++|+
T Consensus 105 ~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~-g~lyv~~~~~~~~~I~~~~~d-g~~---~~~~~~~~~~~P~gia~d~~ 177 (267)
T 1npe_A 105 VAKMDGTQRRVL--FDTGLVNPRGIVTDPVR-GNLYWTDWNRDNPKIETSHMD-GTN---RRILAQDNLGLPNGLTFDAF 177 (267)
T ss_dssp EEETTSCSCEEE--ECSSCSSEEEEEEETTT-TEEEEEECCSSSCEEEEEETT-SCC---CEEEECTTCSCEEEEEEETT
T ss_pred EEEcCCCCEEEE--EECCCCCccEEEEeeCC-CEEEEEECCCCCcEEEEEecC-CCC---cEEEEECCCCCCcEEEEcCC
Confidence 999875432222 12112457899999963 455555433 3566665542 111 11111 11123456777775
Q ss_pred CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762 171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v 250 (318)
. +..+++-...+.|.++|.++...... +.+- .....++.. .+.++++....+.|.+
T Consensus 178 ~----------------~~lyv~d~~~~~I~~~~~~g~~~~~~--~~~~-~~P~gi~~d-----~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 178 S----------------SQLCWVDAGTHRAECLNPAQPGRRKV--LEGL-QYPFAVTSY-----GKNLYYTDWKTNSVIA 233 (267)
T ss_dssp T----------------TEEEEEETTTTEEEEEETTEEEEEEE--EECC-CSEEEEEEE-----TTEEEEEETTTTEEEE
T ss_pred C----------------CEEEEEECCCCEEEEEecCCCceEEE--ecCC-CCceEEEEe-----CCEEEEEECCCCeEEE
Confidence 2 23456666678899999875432222 2222 223566543 2455565556788999
Q ss_pred EEcCCCcceeeEEeeec-CCcEEEEEEcCCCC
Q psy2762 251 WTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGD 281 (318)
Q Consensus 251 w~~~~~~~~~~~~~~~~-~~~v~~v~~spdg~ 281 (318)
++..+... ...+... ....+.+++.|++-
T Consensus 234 ~d~~~g~~--~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 234 MDLAISKE--MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EETTTTEE--EEEECCSSCCCCCCEEEECSCC
T ss_pred EeCCCCCc--eEEEccccccccceeeecCccC
Confidence 98875431 2222221 12356788888763
No 248
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.93 E-value=0.0013 Score=59.76 Aligned_cols=190 Identities=10% Similarity=-0.013 Sum_probs=110.8
Q ss_pred CCCCCcEEEEEECC-----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee---------cCCeEEEE
Q psy2762 76 HPQFGTLLASCSYD-----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS---------SDGTISFL 141 (318)
Q Consensus 76 ~~~~~~~las~s~D-----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs---------~d~~i~i~ 141 (318)
+|.++++++.+... ++|.+.|..+.+.+..... -..+ .++++|+.. .++++.. .++.|.++
T Consensus 80 p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v--G~~P--gia~SpDgk-~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 80 PAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG--GFLP--HPVAAEDGS-FFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE--CSSC--EEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC--CCCC--ceEECCCCC-EEEEEeccccccccCCCCCEEEEE
Confidence 44467766666553 6999999998875544433 2234 799999953 3333322 46688888
Q ss_pred EeecCCCCcceeeec-c------cccccceeeeCCCCCCCccccccCCCCCCccceEEEecC--CCeEEEEEccCCeEEE
Q psy2762 142 TYMSDTNSWESRKIA-A------HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC--DNLIKIWKQEGDKWIE 212 (318)
Q Consensus 142 ~~~~~~~~~~~~~~~-~------h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~--d~~i~iwd~~~~~~~~ 212 (318)
|....+ ....+. + .......+.++|+ ++++..+.. ++.|.+.|..+++...
T Consensus 155 D~~t~~---vv~~I~v~g~~r~~~g~~P~~~~~spD-----------------Gk~lyV~n~~~~~~VsVID~~t~kvv~ 214 (426)
T 3c75_H 155 DPVTFL---PIADIELPDAPRFLVGTYQWMNALTPD-----------------NKNLLFYQFSPAPAVGVVDLEGKTFDR 214 (426)
T ss_dssp CTTTCC---EEEEEEETTCCCCCBSCCGGGSEECTT-----------------SSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred ECCCCc---EEEEEECCCccccccCCCcceEEEcCC-----------------CCEEEEEecCCCCeEEEEECCCCeEEE
Confidence 764332 122222 1 0123456778887 456666653 6889999999887554
Q ss_pred EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE--EeeecCCc-EEEEEEcCCCCEEEEEeCC
Q psy2762 213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF--IMNTFDDV-VWNVSWSLTGDILTVSCGD 289 (318)
Q Consensus 213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~--~~~~~~~~-v~~v~~spdg~~l~s~~~D 289 (318)
.....+ +....|+ ....+++.+.|+++.+.+.......... ....-..+ ...+.|+|+++.++..+..
T Consensus 215 ~I~v~g------~~~~~p~---g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~ 285 (426)
T 3c75_H 215 MLDVPD------CYHIFPA---SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT 285 (426)
T ss_dssp EEECCS------EEEEEEE---ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT
T ss_pred EEEcCC------ceeeccC---CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC
Confidence 433322 1233443 1345667777888777777332110000 00000111 1245789999888777888
Q ss_pred CeEEEEEECC
Q psy2762 290 NSVSLWKENT 299 (318)
Q Consensus 290 ~~v~iW~~~~ 299 (318)
+.|.+.|...
T Consensus 286 g~V~ViD~~~ 295 (426)
T 3c75_H 286 GKIFQADLTA 295 (426)
T ss_dssp SEEEEEEECS
T ss_pred CcEEEEeccC
Confidence 8999988753
No 249
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.92 E-value=0.00037 Score=67.12 Aligned_cols=231 Identities=11% Similarity=0.056 Sum_probs=117.2
Q ss_pred eeeecCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE-CC-----C
Q psy2762 18 DAEMDYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS-YD-----R 90 (318)
Q Consensus 18 ~~~~~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s-~D-----g 90 (318)
++++.++|++++.||. +..+.+||.... ....+..+......- ++... + ++++++.|| .+ .
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~---------~W~~~~~~~~~R~~~-s~~~~-~-dg~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSD---------SWIPGPDMQVARGYQ-SSATM-S-DGRVFTIGGSWSGGVFEK 314 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGT---------EEEECCCCSSCCSSC-EEEEC-T-TSCEEEECCCCCSSSCCC
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCC---------ceeECCCCCcccccc-ceEEe-c-CCeEEEEeCcccCCcccc
Confidence 4567789999999984 568999998622 222222221111111 22222 2 488888888 44 5
Q ss_pred eEEEEeCCCCcEEEEEEe---cCCCcCeEEEEeeCCCCCcEEEEeecCCe---------EEEEEeecCCCCcceeeeccc
Q psy2762 91 KVIIWRGDNGNWFKYYEY---NNHDSSVNSIAWAPKEFGLILACGSSDGT---------ISFLTYMSDTNSWESRKIAAH 158 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~~lasgs~d~~---------i~i~~~~~~~~~~~~~~~~~h 158 (318)
.+.+||+.+..+...-.. ...... ....+..+ +.+++.|+.++. +..||...+ .|.. ....+
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~-~~~~~~~~--~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~--~w~~-~~~~~ 388 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPMLTAD-KQGLYRSD--NHAWLFGWKKGSVFQAGPSTAMNWYYTSGS--GDVK-SAGKR 388 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGCCCC-TTGGGTTT--CSCCEEECGGGCEEECCSSSEEEEEECSTT--CEEE-EEEEC
T ss_pred cceEeCCCCCcceeCCCcccccccccc-ccceeecC--CceEEEECCCCcEEEecCccceeeeecCCc--ceee-cCCcc
Confidence 799999988766443100 000000 00111222 344555655543 445554322 2211 11111
Q ss_pred cc---------ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC-----------eEEEEEccCCeEEEEE--Ec
Q psy2762 159 TI---------GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-----------LIKIWKQEGDKWIEET--KL 216 (318)
Q Consensus 159 ~~---------~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-----------~i~iwd~~~~~~~~~~--~~ 216 (318)
.. ....+.|... .++.++.|+.++ .|.+||..++++.... .+
T Consensus 389 ~~~~~~~~~~~~~~av~~~~~----------------~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m 452 (656)
T 1k3i_A 389 QSNRGVAPDAMCGNAVMYDAV----------------KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL 452 (656)
T ss_dssp EETTEECCCCBTCEEEEEETT----------------TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC
T ss_pred ccccccCCCCCCCceEeccCC----------------CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC
Confidence 10 1112222111 135677777543 6888888887775443 22
Q ss_pred ccCCCCeeEEEEccCCCCCccEEEEEeCC-----------CeEEEEEcCCCcceeeEEeeecC-CcEEEEEEcCCCCEEE
Q psy2762 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQD-----------RKVIIWTSNDYVTWTPFIMNTFD-DVVWNVSWSLTGDILT 284 (318)
Q Consensus 217 ~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-----------~~i~vw~~~~~~~~~~~~~~~~~-~~v~~v~~spdg~~l~ 284 (318)
..... -.+....|+ +++++.||.+ ..+.+||..+. .|......... ..-..+.+.|||+.++
T Consensus 453 p~~R~-~~~~~~l~~----g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~-~W~~~~~~~~~R~~hs~a~ll~dg~v~v 526 (656)
T 1k3i_A 453 YFART-FHTSVVLPD----GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD-TFYKQNPNSIVRVYHSISLLLPDGRVFN 526 (656)
T ss_dssp SSCCB-SCEEEECTT----SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT-EEEECCCCSSCCCTTEEEEECTTSCEEE
T ss_pred CCCcc-cCCeEECCC----CCEEEECCcccCcCcCCCCcccceEEEcCCCC-ceeecCCCCCccccccHhhcCCCcEEEe
Confidence 21111 123345564 7889999865 46889998663 34321101111 1122345679999999
Q ss_pred EEeC
Q psy2762 285 VSCG 288 (318)
Q Consensus 285 s~~~ 288 (318)
.||.
T Consensus 527 ~GG~ 530 (656)
T 1k3i_A 527 GGGG 530 (656)
T ss_dssp EECC
T ss_pred cCCC
Confidence 9885
No 250
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.90 E-value=0.0099 Score=51.83 Aligned_cols=248 Identities=10% Similarity=0.123 Sum_probs=128.5
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEE-ecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE-LKGHSGPVWQVAWAHPQFGTLLASCSYDRK 91 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~~~~~~~~~las~s~Dg~ 91 (318)
...+.++.|.+.+..++ ++.++.| |...+. .++.+.+.. .......+.++.|. + +..++ ++.++.
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i--~~s~Dg-------G~tW~~~~~~~~~~~~~~~~i~~~-~--~~~~~-~g~~g~ 100 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL--METRDG-------GQTWEPRTLVLDHSDYRFNSVSFQ-G--NEGWI-VGEPPI 100 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE--EEESST-------TSSCEECCCCCSCCCCEEEEEEEE-T--TEEEE-EEETTE
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE--EEeCCC-------CCCCeECCCCCCCCCccEEEEEec-C--CeEEE-EECCCe
Confidence 44788999987777777 4567754 332211 112232211 11223457888885 3 34444 455665
Q ss_pred EEEEeCCCC-cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762 92 VIIWRGDNG-NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG 170 (318)
Q Consensus 92 v~vWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 170 (318)
|..- .+.+ .+........++..+..|.+.++ +.+++++ .++.| |...+.-..|.... ..+...+..+.+.|+
T Consensus 101 i~~S-~DgG~tW~~~~~~~~~~~~~~~i~~~~~--~~~~~~~-~~g~v--~~S~DgG~tW~~~~-~~~~~~~~~~~~~~~ 173 (327)
T 2xbg_A 101 MLHT-TDGGQSWSQIPLDPKLPGSPRLIKALGN--GSAEMIT-NVGAI--YRTKDSGKNWQALV-QEAIGVMRNLNRSPS 173 (327)
T ss_dssp EEEE-SSTTSSCEECCCCTTCSSCEEEEEEEET--TEEEEEE-TTCCE--EEESSTTSSEEEEE-CSCCCCEEEEEECTT
T ss_pred EEEE-CCCCCCceECccccCCCCCeEEEEEECC--CCEEEEe-CCccE--EEEcCCCCCCEEee-cCCCcceEEEEEcCC
Confidence 4432 2222 23332111123455778887765 5566655 45543 33323233454322 233445667777764
Q ss_pred CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762 171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v 250 (318)
+.+++.+...+..+-+|.....+.+.. ......+..+.+.|+ +. +..++.++.+++
T Consensus 174 -----------------~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~----g~-~~~~~~~G~~~~ 229 (327)
T 2xbg_A 174 -----------------GEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPD----GR-LWMIVNGGKIAF 229 (327)
T ss_dssp -----------------SCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTT----SC-EEEEETTTEEEE
T ss_pred -----------------CcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCC----CC-EEEEeCCceEEE
Confidence 345665554444444443233443332 234556889999885 44 445667888887
Q ss_pred EEcCCCcceeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEe
Q psy2762 251 WTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307 (318)
Q Consensus 251 w~~~~~~~~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~ 307 (318)
.+......|+..... .....+.+++|.|+++.++.+ .++.+ ++..+-+..|..+.
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDV 286 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECG
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcC
Confidence 743323334322111 112358899999988877755 46766 33334444687654
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.85 E-value=0.0024 Score=61.59 Aligned_cols=55 Identities=9% Similarity=0.212 Sum_probs=37.6
Q ss_pred CCCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 244 QDRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 244 ~D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
.++.|.-||+.+.. .|+.. ...+++...+...|.+|+.++.|+.|+.||..++..
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~----~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVP----YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccceEEEEeCCCCcEEEEcc----CCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 35889999987653 23222 223344445556788899999999999999877643
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.82 E-value=0.011 Score=49.77 Aligned_cols=208 Identities=13% Similarity=0.185 Sum_probs=123.4
Q ss_pred EecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEE
Q psy2762 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF 140 (318)
Q Consensus 61 ~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i 140 (318)
.+.+-.+.+..++|.+. .+.+++....++.|...|.. ++......+.+. .....|++.++ +.++++.-.++.+.+
T Consensus 21 ~l~g~~~~lSGla~~~~-~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~--g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQ-SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGD--NQFVISDERDYAIYV 95 (255)
T ss_dssp ECTTCCSCEEEEEEETT-TTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECST--TEEEEEETTTTEEEE
T ss_pred ECCCcccCcceeEEeCC-CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCC--CEEEEEECCCCcEEE
Confidence 45666678999999743 45677778888899988987 665555545442 45778888876 566666556677777
Q ss_pred EEeecCCCCcceeeec------ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC---CeEE
Q psy2762 141 LTYMSDTNSWESRKIA------AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG---DKWI 211 (318)
Q Consensus 141 ~~~~~~~~~~~~~~~~------~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~---~~~~ 211 (318)
+++............. ....+...++|.|. ++.|.++.+.....||..+. ....
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~-----------------~~~L~va~E~~p~~i~~~~g~~~~~~l 158 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ-----------------DHTFWFFKEKNPIEVYKVNGLLSSNEL 158 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETT-----------------TTEEEEEEESSSEEEEEEESTTCSSCC
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCC-----------------CCEEEEEECcCCceEEEEcccccCCce
Confidence 7764333111111111 12233467777775 23444455544555555431 1101
Q ss_pred EEEE---c--ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee-ec------CCcEEEEEEcCC
Q psy2762 212 EETK---L--ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN-TF------DDVVWNVSWSLT 279 (318)
Q Consensus 212 ~~~~---~--~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~-~~------~~~v~~v~~spd 279 (318)
.... + ..+...+..|+++|. .+.+++.....+.|-++|....... ...+. +. -..--.|+|.|+
T Consensus 159 ~i~~~~~~~~~~~~~d~S~l~~dp~---tg~lliLS~~s~~L~~~d~~g~~~~-~~~L~~g~~~l~~~~~qpEGia~d~~ 234 (255)
T 3qqz_A 159 HISKDKALQRQFTLDDVSGAEFNQQ---KNTLLVLSHESRALQEVTLVGEVIG-EMSLTKGSRGLSHNIKQAEGVAMDAS 234 (255)
T ss_dssp EEEECHHHHHTCCSSCCCEEEEETT---TTEEEEEETTTTEEEEECTTCCEEE-EEECSTTGGGCSSCCCSEEEEEECTT
T ss_pred eeecchhhccccccCCceeEEEcCC---CCeEEEEECCCCeEEEEcCCCCEEE-EEEcCCccCCcccccCCCCeeEECCC
Confidence 1110 0 123345789999997 5778888888899999988764211 11121 11 125679999999
Q ss_pred CCEEEEEeCCCeEEEEEE
Q psy2762 280 GDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 280 g~~l~s~~~D~~v~iW~~ 297 (318)
|++. .+++-+ .+|..
T Consensus 235 G~ly-IvsE~n--~~y~f 249 (255)
T 3qqz_A 235 GNIY-IVSEPN--RFYRF 249 (255)
T ss_dssp CCEE-EEETTT--EEEEE
T ss_pred CCEE-EEcCCc--eEEEE
Confidence 9855 457777 44543
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.82 E-value=0.016 Score=51.73 Aligned_cols=245 Identities=8% Similarity=-0.045 Sum_probs=130.8
Q ss_pred eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEe
Q psy2762 17 HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR 96 (318)
Q Consensus 17 ~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd 96 (318)
.+.+..+.+.++++ ....|+..++... .....+. .......++|.+ ..+.++++-...+.|..++
T Consensus 80 ~C~~~~~~~~l~~~--~~~~I~~i~~~~~-----------~~~~~~~-~~~~~~gl~~d~-~~~~ly~~D~~~~~I~r~~ 144 (386)
T 3v65_B 80 SCKALGPEPVLLFA--NRIDIRQVLPHRS-----------EYTLLLN-NLENAIALDFHH-RRELVFWSDVTLDRILRAN 144 (386)
T ss_dssp CEEECSSCCEEEEE--CBSCEEEECTTSC-----------CCEEEEC-SCSCEEEEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred eECCccccceeEee--cCccceeeccCCC-----------cEEEEec-CCCccEEEEEec-CCCeEEEEeCCCCcEEEEe
Confidence 34444454433333 3456777777521 1112222 234577899964 3466666666678899999
Q ss_pred CCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCcc
Q psy2762 97 GDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSE 176 (318)
Q Consensus 97 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 176 (318)
+..+....+. .........+++.+.. +.++.+-...+.|.+.++. +. .....+.........+++.|..
T Consensus 145 ~~g~~~~~~~--~~~~~~p~glavd~~~-g~lY~~d~~~~~I~~~~~d-g~--~~~~l~~~~l~~P~giavdp~~----- 213 (386)
T 3v65_B 145 LNGSNVEEVV--STGLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLD-GA--HRKVLLWQSLEKPRAIALHPME----- 213 (386)
T ss_dssp TTSCCEEEEE--CSSCSCCCCEEEETTT-TEEEEEETTTTEEEECBTT-SC--SCEEEECSSCSCEEEEEEETTT-----
T ss_pred cCCCCcEEEE--eCCCCCccEEEEEeCC-CeEEEEcCCCCeEEEEeCC-CC--ceEEeecCCCCCCcEEEEEcCC-----
Confidence 8765432221 2122345677888753 4555665556666665432 11 1111111111234566666642
Q ss_pred ccccCCCCCCccceEEEecCC-CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762 177 LDLKGSKLGGVAKRLVSGGCD-NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255 (318)
Q Consensus 177 ~~~~~~~~~~~~~~lasgs~d-~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~ 255 (318)
+..+.+-... +.|..++++....... ....-...+.|+|+|+ .+.+.++=+..+.|..++...
T Consensus 214 -----------g~ly~td~~~~~~I~r~~~dG~~~~~~--~~~~~~~PnGlavd~~---~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 214 -----------GTIYWTDWGNTPRIEASSMDGSGRRII--ADTHLFWPNGLTIDYA---GRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp -----------TEEEEEECSSSCEEEEEETTSCSCEEE--ECSSCSCEEEEEEEGG---GTEEEEEETTTTEEEEECTTS
T ss_pred -----------CeEEEeccCCCCEEEEEeCCCCCcEEE--EECCCCCeeeEEEeCC---CCEEEEEECCCCEEEEEeCCC
Confidence 2334444444 6788888775432211 1223345789999986 355556556678899998765
Q ss_pred CcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 256 YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 256 ~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
.... ............+++ ..+..+.+-...+.|...+...+.....+
T Consensus 278 ~~~~--~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 278 SHRK--AVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp CSCE--EEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CeeE--EEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 3321 122222334667888 35556666656777777764444444433
No 254
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.70 E-value=0.021 Score=49.68 Aligned_cols=235 Identities=10% Similarity=0.073 Sum_probs=120.7
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV 92 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v 92 (318)
...+.++.|++ +..++ ++.++.| |...+. .++.+.+.....+.+.++.+.+.. ++..++.+ .++.|
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i--~~S~Dg-------G~tW~~~~~~~~~~~~~~~i~~~~--~~~~~~~~-~~g~v 144 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIM--LHTTDG-------GQSWSQIPLDPKLPGSPRLIKALG--NGSAEMIT-NVGAI 144 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEE--EEESST-------TSSCEECCCCTTCSSCEEEEEEEE--TTEEEEEE-TTCCE
T ss_pred CccEEEEEecC-CeEEE-EECCCeE--EEECCC-------CCCceECccccCCCCCeEEEEEEC--CCCEEEEe-CCccE
Confidence 44688888876 44444 4556644 333211 122333222222345567777643 25555554 45543
Q ss_pred -EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecC-CCCcceeeecccccccceeeeCCC
Q psy2762 93 -IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSD-TNSWESRKIAAHTIGCNAVSWGPG 170 (318)
Q Consensus 93 -~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~-~~~~~~~~~~~h~~~v~~~~~~p~ 170 (318)
+-.|- ...+.... ..+...+..+++.|+ +.+++.+. ++.+.. .... -..|.... ......+..+.+.|+
T Consensus 145 ~~S~Dg-G~tW~~~~--~~~~~~~~~~~~~~~--~~~~~~g~-~G~~~~--S~d~gG~tW~~~~-~~~~~~~~~~~~~~~ 215 (327)
T 2xbg_A 145 YRTKDS-GKNWQALV--QEAIGVMRNLNRSPS--GEYVAVSS-RGSFYS--TWEPGQTAWEPHN-RTTSRRLHNMGFTPD 215 (327)
T ss_dssp EEESST-TSSEEEEE--CSCCCCEEEEEECTT--SCEEEEET-TSSEEE--EECTTCSSCEEEE-CCSSSCEEEEEECTT
T ss_pred EEEcCC-CCCCEEee--cCCCcceEEEEEcCC--CcEEEEEC-CCcEEE--EeCCCCCceeECC-CCCCCccceeEECCC
Confidence 33332 12344432 245567889999987 56666554 444322 2121 23343322 123344556666664
Q ss_pred CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEcc--cCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762 171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLE--NHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~--~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 247 (318)
+. +..++.+|.+++.+.+.+ .+... ... .+...+.+|.|.|+ +..++ ++.++.
T Consensus 216 -----------------g~-~~~~~~~G~~~~s~~D~G~tW~~~-~~~~~~~~~~~~~v~~~~~----~~~~~-~g~~g~ 271 (327)
T 2xbg_A 216 -----------------GR-LWMIVNGGKIAFSDPDNSENWGEL-LSPLRRNSVGFLDLAYRTP----NEVWL-AGGAGA 271 (327)
T ss_dssp -----------------SC-EEEEETTTEEEEEETTEEEEECCC-BCTTSSCCSCEEEEEESSS----SCEEE-EESTTC
T ss_pred -----------------CC-EEEEeCCceEEEecCCCCCeeEec-cCCcccCCcceEEEEecCC----CEEEE-EeCCCe
Confidence 22 445566788777643322 23211 111 12235889999874 55555 455777
Q ss_pred EEEEEcCCCcceeeEEee-ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762 248 VIIWTSNDYVTWTPFIMN-TFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296 (318)
Q Consensus 248 i~vw~~~~~~~~~~~~~~-~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~ 296 (318)
| ++.......|+..... .....+.+|.|.++++ ++.++.+|++.-++
T Consensus 272 i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 272 L-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp E-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred E-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 6 4445545556432111 1235678899986665 55677788765443
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.68 E-value=0.024 Score=49.84 Aligned_cols=248 Identities=8% Similarity=-0.052 Sum_probs=134.2
Q ss_pred ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762 14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
+..+|.+..+.+.++++- ...|+..+++. ......+.+ ......++|.+ ..+.++.+-...+.|.
T Consensus 34 d~~~C~~~~~~~~ll~~~--~~~I~~i~~~g-----------~~~~~~~~~-~~~~~~l~~d~-~~~~ly~~D~~~~~I~ 98 (349)
T 3v64_C 34 DRRSCKALGPEPVLLFAN--RIDIRQVLPHR-----------SEYTLLLNN-LENAIALDFHH-RRELVFWSDVTLDRIL 98 (349)
T ss_dssp TSSCEEESSSCCEEEEEC--BSCEEEECTTS-----------CCEEEEECS-CSCEEEEEEET-TTTEEEEEETTTTEEE
T ss_pred CCCcccccccCceeEeec--ccceEEEeCCC-----------CeeEEeecC-CCceEEEEEec-cccEEEEEeccCCceE
Confidence 344555555644444432 34577776642 122222232 34478899964 3456666666678899
Q ss_pred EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS 173 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 173 (318)
.+++..+...... .........+++.+.. +.++.+-...+.|.+.+.. +.. ....+.........+++.|..
T Consensus 99 r~~~~g~~~~~~~--~~~~~~p~glavd~~~-g~ly~~d~~~~~I~~~~~d-G~~--~~~l~~~~l~~P~~iavdp~~-- 170 (349)
T 3v64_C 99 RANLNGSNVEEVV--STGLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLD-GAH--RKVLLWQSLEKPRAIALHPME-- 170 (349)
T ss_dssp EEETTSCSCEEEE--CSSCSCCCEEEEETTT-TEEEEEETTTTEEEEEETT-SCS--CEEEECTTCSCEEEEEEETTT--
T ss_pred EEecCCCCceEEE--eCCCCCccEEEEecCC-CeEEEEcCCCCeEEEEcCC-CCc--eEEEEeCCCCCcceEEEecCc--
Confidence 9988765432221 1122345678888753 4566666666777776642 111 111111122234567777642
Q ss_pred CccccccCCCCCCccceEEEecCC-CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762 174 LSELDLKGSKLGGVAKRLVSGGCD-NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 252 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~lasgs~d-~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~ 252 (318)
+..+.+-... +.|...+++....... ....-...+.|+++|+ .+.+..+=+..+.|..++
T Consensus 171 --------------g~ly~td~~~~~~I~r~~~dG~~~~~~--~~~~~~~PnGla~d~~---~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 171 --------------GTIYWTDWGNTPRIEASSMDGSGRRII--ADTHLFWPNGLTIDYA---GRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp --------------TEEEEEECSSSCEEEEEETTSCSCEES--CCSSCSCEEEEEEETT---TTEEEEEETTTTEEEEEE
T ss_pred --------------CeEEEeccCCCCEEEEEeCCCCCcEEE--EECCCCCcceEEEeCC---CCEEEEEECCCCEEEEEe
Confidence 2334444444 7788888775432111 1222345789999986 355666666678899998
Q ss_pred cCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
....... ............+++. .+..+.+-...+.|...+...+.....+
T Consensus 232 ~dG~~~~--~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 232 LDGSHRK--AVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTSCSCE--EEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCceE--EEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 8754321 1222223456678883 5555555556677766663344444433
No 256
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.67 E-value=0.003 Score=61.82 Aligned_cols=199 Identities=11% Similarity=0.065 Sum_probs=99.2
Q ss_pred CeEEEEec-CCCCCcEEEEEEC-C----CeEEEEeCCCC-cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC----
Q psy2762 68 PVWQVAWA-HPQFGTLLASCSY-D----RKVIIWRGDNG-NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG---- 136 (318)
Q Consensus 68 ~V~~v~~~-~~~~~~~las~s~-D----g~v~vWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~---- 136 (318)
.+...+|+ + ||++||-+.. + .+|.++|+.++ +... ..+. .....++|+|| +..|+....|.
T Consensus 175 ~~~~~~~S~P--DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~---~~~~~~~WspD--g~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKPAPP--EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVS---GTNGEIVWGPD--HTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEECTT--TTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEE---EECSCCEECSS--TTEEEEEEECTTCCE
T ss_pred EEeeeEecCC--CCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-cccc---CceeeEEEecC--CCEEEEEEECCCCCC
Confidence 57778997 4 5887775433 2 25999999887 5211 0111 11346789999 44455555542
Q ss_pred -eEEEEEeecCCCCcceeeec--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEec---CCCeEEEEEccCC--
Q psy2762 137 -TISFLTYMSDTNSWESRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG---CDNLIKIWKQEGD-- 208 (318)
Q Consensus 137 -~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs---~d~~i~iwd~~~~-- 208 (318)
.|.++++ +........+. ....-...+.|+|+ +++|+..+ ....|+++|+.++
T Consensus 247 ~~v~~~~l--gt~~~~~~lv~~~~~~~~~~~~~~SpD-----------------g~~l~~~~~~~~~~~l~~~d~~~~~~ 307 (751)
T 2xe4_A 247 NKVWRHVM--GKLQSEDVCLYEEHNPLFSAFMYKAAD-----------------TNTLCIGSQSPETAEVHLLDLRKGNA 307 (751)
T ss_dssp EEEEEEET--TSCGGGCEEEEECCCTTCEEEEEECTT-----------------SSEEEEEEECSSCEEEEEEESSSCTT
T ss_pred CEEEEEEC--CCCchhcEEEEecCCCceEEEEEECCC-----------------CCEEEEEecCCCCceEEEEECCCCCC
Confidence 3444544 22211111221 11122346678887 34555433 2335777887754
Q ss_pred eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC--C--eEEEEEcCCCcceee-EEeeecCCcEEEEEEcCCCCEE
Q psy2762 209 KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD--R--KVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDIL 283 (318)
Q Consensus 209 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D--~--~i~vw~~~~~~~~~~-~~~~~~~~~v~~v~~spdg~~l 283 (318)
++..............++.|+.. +.+++....+ + .|..+++.+...+.. .........+.++++. .+.++
T Consensus 308 ~~~~~~l~~~~~~~~~s~~~~~g----~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv 382 (751)
T 2xe4_A 308 HNTLEIVRPREKGVRYDVQMHGT----SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLV 382 (751)
T ss_dssp CCCEEESSCCCTTCCEEEEEETT----TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEE
T ss_pred CceeEEeecCCCCceEEEeeeeC----CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEE
Confidence 22001112334445566665542 4444444443 3 455556543222222 1111112245566665 34456
Q ss_pred EEEeCCCeEEEEEEC
Q psy2762 284 TVSCGDNSVSLWKEN 298 (318)
Q Consensus 284 ~s~~~D~~v~iW~~~ 298 (318)
++...|+..+||-.+
T Consensus 383 ~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 383 VAGRRAGLTRIWTMM 397 (751)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred EEEEeCCEEEEEEEe
Confidence 666778877777655
No 257
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.67 E-value=0.021 Score=48.70 Aligned_cols=198 Identities=16% Similarity=0.252 Sum_probs=102.9
Q ss_pred CcEEEEEECC-----CeEEEEeCCCCc---EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-----eEEEEEeecC
Q psy2762 80 GTLLASCSYD-----RKVIIWRGDNGN---WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-----TISFLTYMSD 146 (318)
Q Consensus 80 ~~~las~s~D-----g~v~vWd~~~~~---~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-----~i~i~~~~~~ 146 (318)
+.+++.|+.+ ..+.++|+.+.. +.....+......-..+.+ + +.+++.|+.++ .+.++|+ .
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~d~--~ 136 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--G--DMIYVSGGFDGSRRHTSMERYDP--N 136 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCEEEEEET--T
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--C--CEEEEEcccCCCcccceEEEEcC--C
Confidence 6777777765 468889988877 7665443322222222222 3 56777777553 3444443 3
Q ss_pred CCCcceeeecccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCC
Q psy2762 147 TNSWESRKIAAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHS 220 (318)
Q Consensus 147 ~~~~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~ 220 (318)
.+.|....-.... .....+.+. ++.++.|+.+ ..+.+||..++++.....+....
T Consensus 137 ~~~W~~~~~~p~~r~~~~~~~~~-------------------~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 197 (301)
T 2vpj_A 137 IDQWSMLGDMQTAREGAGLVVAS-------------------GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR 197 (301)
T ss_dssp TTEEEEEEECSSCCBSCEEEEET-------------------TEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred CCeEEECCCCCCCcccceEEEEC-------------------CEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc
Confidence 3334322111100 000111110 2455666654 45889999888886654443322
Q ss_pred CCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC-----C
Q psy2762 221 DWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----N 290 (318)
Q Consensus 221 ~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-----~ 290 (318)
..-..+.+ ++.+++.|+.+ ..+.+||..+.. |....... .......+...+++.++.|+.+ .
T Consensus 198 ~~~~~~~~------~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p-~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 269 (301)
T 2vpj_A 198 SGAGVALL------NDHIYVVGGFDGTAHLSSVEAYNIRTDS-WTTVTSMT-TPRCYVGATVLRGRLYAIAGYDGNSLLS 269 (301)
T ss_dssp BSCEEEEE------TTEEEEECCBCSSSBCCCEEEEETTTTE-EEEECCCS-SCCBSCEEEEETTEEEEECCBCSSSBEE
T ss_pred ccceEEEE------CCEEEEEeCCCCCcccceEEEEeCCCCc-EEECCCCC-CcccceeEEEECCEEEEEcCcCCCcccc
Confidence 22222332 25677778765 458889887643 43221111 1111111222267777777755 3
Q ss_pred eEEEEEECCCCceEEEeeecc
Q psy2762 291 SVSLWKENTDGAWQCITEMGK 311 (318)
Q Consensus 291 ~v~iW~~~~~~~~~~~~~~~~ 311 (318)
.+.+||..+ ..|..+..|..
T Consensus 270 ~v~~yd~~~-~~W~~~~~~~~ 289 (301)
T 2vpj_A 270 SIECYDPII-DSWEVVTSMGT 289 (301)
T ss_dssp EEEEEETTT-TEEEEEEEEEE
T ss_pred cEEEEcCCC-CeEEEcCCCCc
Confidence 566777544 68998877654
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.65 E-value=0.023 Score=48.80 Aligned_cols=214 Identities=12% Similarity=0.049 Sum_probs=114.4
Q ss_pred ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD 135 (318)
Q Consensus 56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d 135 (318)
.+++..+... .....++|.+ +++++++-...+.|..||.... ....... ...+..+++.|+ +.++++....
T Consensus 22 ~~~~~~~p~~-~~pegia~~~--~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~---~~~p~gia~~~d--G~l~vad~~~ 92 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAP--DGTIFVTNHEVGEIVSITPDGN-QQIHATV---EGKVSGLAFTSN--GDLVATGWNA 92 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECT--TSCEEEEETTTTEEEEECTTCC-EEEEEEC---SSEEEEEEECTT--SCEEEEEECT
T ss_pred ceEeEeCCCC-CCcceEEECC--CCCEEEEeCCCCeEEEECCCCc-eEEEEeC---CCCceeEEEcCC--CcEEEEeccC
Confidence 4556666543 4567899864 4777777667899999997753 3333322 346889999998 4555554332
Q ss_pred -C-eEEEEEeecCCCCcceeeecccc--cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762 136 -G-TISFLTYMSDTNSWESRKIAAHT--IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI 211 (318)
Q Consensus 136 -~-~i~i~~~~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~ 211 (318)
+ .|..++. ... ....+.... .....++..+. +..+++-..++.|.++|...+...
T Consensus 93 ~~~~v~~~d~--~~g--~~~~~~~~~~~~~~~g~~~~~~-----------------~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 93 DSIPVVSLVK--SDG--TVETLLTLPDAIFLNGITPLSD-----------------TQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp TSCEEEEEEC--TTS--CEEEEEECTTCSCEEEEEESSS-----------------SEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcceEEEEcC--CCC--eEEEEEeCCCccccCcccccCC-----------------CcEEEEECCCCeEEEEeCCCCcEe
Confidence 2 2433332 221 111211110 00111111111 234555556788888887654211
Q ss_pred EE--E------EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC-CcceeeEEeeecCCcEEEEEEcCCCCE
Q psy2762 212 EE--T------KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND-YVTWTPFIMNTFDDVVWNVSWSLTGDI 282 (318)
Q Consensus 212 ~~--~------~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~-~~~~~~~~~~~~~~~v~~v~~spdg~~ 282 (318)
.. . ...+.-...+.| +|+ .+.++++-...+.|..++... ............ .....++++++|++
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~d---g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l 225 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRF---GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNL 225 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEE---TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCE
T ss_pred EEEECCccccccccCCCCcCCCc--CcC---CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCE
Confidence 10 0 001111234556 675 234566666788999999864 111111111111 23457899999988
Q ss_pred EEEEeCCCeEEEEEECCCCceEEEe
Q psy2762 283 LTVSCGDNSVSLWKENTDGAWQCIT 307 (318)
Q Consensus 283 l~s~~~D~~v~iW~~~~~~~~~~~~ 307 (318)
+++-...+.|.+++ ..|+...+.
T Consensus 226 ~va~~~~~~V~~~~--~~G~~~~~~ 248 (306)
T 2p4o_A 226 YGATHIYNSVVRIA--PDRSTTIIA 248 (306)
T ss_dssp EEECBTTCCEEEEC--TTCCEEEEE
T ss_pred EEEeCCCCeEEEEC--CCCCEEEEe
Confidence 77666678888886 345554443
No 259
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.62 E-value=0.0017 Score=56.06 Aligned_cols=176 Identities=14% Similarity=0.082 Sum_probs=96.9
Q ss_pred CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762 80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159 (318)
Q Consensus 80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~ 159 (318)
+..|..++.++.+..+|.. +.. .+....+...+.++...++ +. +..++.++.|..++.. +. .........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~~~~--g~-l~vgt~~~~l~~~d~~-g~---~~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTE--KWRFKTKKAIYATPIVSED--GT-IYVGSNDNYLYAINPD-GT---EKWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCE--EEEEECSSCCCSCCEECTT--SC-EEEECTTSEEEEECTT-SC---EEEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-CCE--EEEEcCCCceeeeeEEcCC--CE-EEEEcCCCEEEEECCC-CC---EeEEEecCC
Confidence 3457778889999999987 553 3333334444566666655 44 4456777888777653 22 111111122
Q ss_pred cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762 160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239 (318)
Q Consensus 160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l 239 (318)
..+..+...++ + .|..++ +.|..+| .+++.. ..+......+.++...++ + .|
T Consensus 177 ~~~~~~~~d~~-----------------g-~l~v~t--~~l~~~d-~~g~~~--~~~~~~~~~~~~~~~~~~----g-~l 228 (330)
T 3hxj_A 177 AITSAASIGKD-----------------G-TIYFGS--DKVYAIN-PDGTEK--WNFYAGYWTVTRPAISED----G-TI 228 (330)
T ss_dssp CCCSCCEECTT-----------------C-CEEEES--SSEEEEC-TTSCEE--EEECCSSCCCSCCEECTT----S-CE
T ss_pred CceeeeEEcCC-----------------C-EEEEEe--CEEEEEC-CCCcEE--EEEccCCcceeceEECCC----C-eE
Confidence 22333333222 2 244455 7889999 444322 223334455778888764 4 35
Q ss_pred EEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 240 ~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
..++.++.|..++......+. .......+.++...++|+ |..++.++.|..++.
T Consensus 229 ~v~t~~~gl~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 229 YVTSLDGHLYAINPDGTEKWR---FKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp EEEETTTEEEEECTTSCEEEE---EECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred EEEcCCCeEEEECCCCCEeEE---eeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 556778888888754432221 111222233455566665 455777878888873
No 260
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.56 E-value=0.0037 Score=55.68 Aligned_cols=236 Identities=11% Similarity=-0.062 Sum_probs=125.8
Q ss_pred eeeeeeecC-C-CCEEEEeeCCC----cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE-
Q psy2762 15 MIHDAEMDY-L-GLYLATCSSDH----TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS- 87 (318)
Q Consensus 15 ~v~~~~~~~-~-g~~l~s~s~D~----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s- 87 (318)
.+.+..+.+ . ....++...++ +|.|.|.+ +++++.++.....+ .+.+++ ++++|+.+.
T Consensus 20 ~~~~~~~~~~~~~~~yV~~~~~~~~~d~vsvID~~-----------t~~v~~~i~vG~~P--~i~~sp--Dg~~lyVan~ 84 (368)
T 1mda_H 20 GSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAG-----------CGVTLGHSLGAFLS--LAVAGH--SGSDFALAST 84 (368)
T ss_dssp CCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETT-----------TTEEEEEEEECTTC--EEEECT--TSSCEEEEEE
T ss_pred ccccccCCCCCCCeEEEECCccCCccceEEEEECC-----------CCeEEEEEeCCCCC--ceEECC--CCCEEEEEcc
Confidence 333444443 3 23444555455 78899986 45778888755556 688874 588888876
Q ss_pred ---------CCCeEEEEeCCCCcEEEEEEecCC-----CcCeEEEEeeCCCCCcEEEEeec--CCeEEE--EEeecCCCC
Q psy2762 88 ---------YDRKVIIWRGDNGNWFKYYEYNNH-----DSSVNSIAWAPKEFGLILACGSS--DGTISF--LTYMSDTNS 149 (318)
Q Consensus 88 ---------~Dg~v~vWd~~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~~lasgs~--d~~i~i--~~~~~~~~~ 149 (318)
.+++|.+||..+.+......+.+. ......++++|+ ++++..+.. +..|.+ +|...
T Consensus 85 ~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpD--Gk~lyVan~~~~~~v~V~~iD~~t---- 158 (368)
T 1mda_H 85 SFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS--SACLLFFLFGSSAAAGLSVPGASD---- 158 (368)
T ss_dssp EETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT--SSCEEEEECSSSCEEEEEETTTEE----
T ss_pred cccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCC--CCEEEEEccCCCCeEEEEEEchhh----
Confidence 378999999998876555444310 123457899999 545555543 456777 65422
Q ss_pred cceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-----CeEEEEE--EcccCCCC
Q psy2762 150 WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-----DKWIEET--KLENHSDW 222 (318)
Q Consensus 150 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-----~~~~~~~--~~~~h~~~ 222 (318)
...+.. .++ ....|+. ...+++.+.|+.+-+.+... ++..... .+.--..+
T Consensus 159 --v~~i~v--~~~--~~~~p~g----------------~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 159 --DQLTKS--ASC--FHIHPGA----------------AATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp --EEEEEC--SSC--CCCEEEE----------------TTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred --ceEEEC--CCc--eEEccCC----------------CeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 112210 011 1111211 12355667788887778765 2211000 01111222
Q ss_pred eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee------cC----CcEEEEEEcCCCCEEEEEeC----
Q psy2762 223 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT------FD----DVVWNVSWSLTGDILTVSCG---- 288 (318)
Q Consensus 223 V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~------~~----~~v~~v~~spdg~~l~s~~~---- 288 (318)
. . +++ +..++-.+. +.+.+.|.............- .. ....-++|+|||+.|..+..
T Consensus 217 ~---~-~~~----~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~ 287 (368)
T 1mda_H 217 A---Q-ANY----PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSR 287 (368)
T ss_dssp E---E-ETT----TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSS
T ss_pred c---c-ccc----CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccC
Confidence 2 2 443 334444445 888888875421000000000 00 01111689999998876533
Q ss_pred -----CCeEEEEEECCCCc
Q psy2762 289 -----DNSVSLWKENTDGA 302 (318)
Q Consensus 289 -----D~~v~iW~~~~~~~ 302 (318)
++.+.++|..+...
T Consensus 288 ~~~~~~~~~~ViD~~t~~v 306 (368)
T 1mda_H 288 SCLAAAENTSSVTASVGQT 306 (368)
T ss_dssp CTTSCEEEEEEEESSSCCE
T ss_pred cccccCCCEEEEECCCCeE
Confidence 23566999777543
No 261
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.52 E-value=0.021 Score=55.83 Aligned_cols=117 Identities=15% Similarity=0.061 Sum_probs=66.7
Q ss_pred CCCcc-eeeeeeec-CCCCEEEEeeC-C----CcEEEEEcCCCcCCCCCCCCcceEE-EEecccccCeEEEEecCCCCCc
Q psy2762 10 TGHED-MIHDAEMD-YLGLYLATCSS-D----HTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQFGT 81 (318)
Q Consensus 10 ~gH~~-~v~~~~~~-~~g~~l~s~s~-D----~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~~~~~~~ 81 (318)
.+|.. .+...+|| |||++||-... + .+|+++|++.+. +.+ ..+. .....+.|++ ||+
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~----------~~l~~~~~---~~~~~~~Wsp--Dg~ 233 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS----------QTIADKVS---GTNGEIVWGP--DHT 233 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT----------CCCCCCEE---EECSCCEECS--STT
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC----------EeCCcccc---CceeeEEEec--CCC
Confidence 35554 67889999 99998874332 2 359999987320 110 0011 1134578974 577
Q ss_pred EEEEEECCC-----eEEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec---CCeEEEEEee
Q psy2762 82 LLASCSYDR-----KVIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS---DGTISFLTYM 144 (318)
Q Consensus 82 ~las~s~Dg-----~v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~---d~~i~i~~~~ 144 (318)
.|+....|. .|.++++.++. ...++.. ........+.|+|+ +.+|+..+. ...|.+++..
T Consensus 234 ~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 234 SLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEE-HNPLFSAFMYKAAD--TNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp EEEEEEECTTCCEEEEEEEETTSCGGGCEEEEEC-CCTTCEEEEEECTT--SSEEEEEEECSSCEEEEEEESS
T ss_pred EEEEEEECCCCCCCEEEEEECCCCchhcEEEEec-CCCceEEEEEECCC--CCEEEEEecCCCCceEEEEECC
Confidence 777777662 57777776653 1233322 22344668899999 444544332 2345555653
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.49 E-value=0.055 Score=49.07 Aligned_cols=155 Identities=10% Similarity=0.087 Sum_probs=83.7
Q ss_pred eeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC-C--
Q psy2762 15 MIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD-R-- 90 (318)
Q Consensus 15 ~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D-g-- 90 (318)
....++++| ++..|..+...+.|+.+|++. +. +..+.........++|++ ++++|+.+... +
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~-----------~~-v~~~~~~~~~P~~ia~d~--~G~~lyvad~~~~~~ 203 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEK-----------EY-VSTVYSGLSKVRTICWTH--EADSMIITNDQNNND 203 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTT-----------TE-EEEEECCCSCEEEEEECT--TSSEEEEEECCSCTT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCC-----------CE-EEEEecCCCCcceEEEeC--CCCEEEEEeCCCCcc
Confidence 446788887 344455444447888888762 22 333333445578899863 47756555542 1
Q ss_pred --eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccccceee
Q psy2762 91 --KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAVS 166 (318)
Q Consensus 91 --~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~ 166 (318)
.+.+.+.. +.......+.. ......+++.|++ +.++++-..++.|..++.. .. ....+. ........++
T Consensus 204 ~~~v~~~~~~-g~~~~~~~l~~-~~~p~giavdp~~-g~lyv~d~~~~~V~~~~~~--~~--~~~~~~~~~~~~~P~gia 276 (430)
T 3tc9_A 204 RPNNYILTRE-SGFKVITELTK-GQNCNGAETHPIN-GELYFNSWNAGQVFRYDFT--TQ--ETTPLFTIQDSGWEFHIQ 276 (430)
T ss_dssp SEEEEEEEGG-GTSCSEEEEEE-CSSCCCEEECTTT-CCEEEEETTTTEEEEEETT--TT--EEEEEEECSSSSCCEEEE
T ss_pred cceEEEEeCC-Cceeeeeeecc-CCCceEEEEeCCC-CEEEEEECCCCEEEEEECC--CC--cEEEEEEcCCCCcceeEE
Confidence 23333332 22210011111 1234678899943 5666666667777777642 11 111111 1112345688
Q ss_pred eCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG 207 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~ 207 (318)
|+|+ ++ .+++-...+.|+.++.+.
T Consensus 277 ~~pd-----------------G~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 277 FHPS-----------------GNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ECTT-----------------SSEEEEEETTTTEEEEEEEET
T ss_pred EcCC-----------------CCEEEEEECCCCEEEEEeCCc
Confidence 8886 34 455556677898887653
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.47 E-value=0.051 Score=51.28 Aligned_cols=55 Identities=9% Similarity=0.146 Sum_probs=33.9
Q ss_pred CCCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 244 QDRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 244 ~D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
.++.|..||..+.. .|+.. ....+.+......+..+..++.|+.|+.||..++..
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~----~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKW----EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEE----ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCCeEEEEECCCCCEEEEec----CCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 35778888876543 23221 122233333344566777789999999999877643
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.39 E-value=0.07 Score=47.85 Aligned_cols=232 Identities=13% Similarity=-0.018 Sum_probs=123.8
Q ss_pred CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC----cEEEEEEec
Q psy2762 34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG----NWFKYYEYN 109 (318)
Q Consensus 34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~----~~~~~~~~~ 109 (318)
...|+..+++.. ... .+......+..++|.. ..+.++.+-...+.|..+++... .... .+.
T Consensus 91 ~~~I~~i~l~~~---------~~~---~~~~~~~~~~~l~~d~-~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~--~~~ 155 (400)
T 3p5b_L 91 RHEVRKMTLDRS---------EYT---SLIPNLRNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VIS 155 (400)
T ss_dssp TTEEEEECTTSC---------SCE---EEECSCSCEEEEEEET-TTTEEEEEETTTTEEEEEEC------CCCEE--EEC
T ss_pred cceeEEEccCCc---------cee---EeccccCcceEEeeee-ccCceEEEecCCCeEEEEEcccCCCCCcceE--EEe
Confidence 468888887632 111 1223456678999964 34566666556788888887652 1111 122
Q ss_pred CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccc
Q psy2762 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189 (318)
Q Consensus 110 ~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 189 (318)
........+++.+.. +.++.+-...+.|.+.++. +. .....+.........++..|.. +.
T Consensus 156 ~~~~~p~glavD~~~-~~lY~~d~~~~~I~~~~~~-g~--~~~~l~~~~~~~P~~iavdp~~----------------g~ 215 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVADTK-GV--KRKTLFRENGSKPRAIVVDPVH----------------GF 215 (400)
T ss_dssp SSCSCEEEEEEETTT-TEEEEEETTTTEEEEECTT-TC--SEEEEEECSSCCEEEEEEETTT----------------TE
T ss_pred CCCCCcccEEEEecC-CceEEEECCCCeEEEEeCC-CC--ceEEEEeCCCCCcceEEEeccc----------------Ce
Confidence 223456788888743 4566666666777765542 11 1111111112224566776642 22
Q ss_pred eEEEe-cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC
Q psy2762 190 RLVSG-GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD 268 (318)
Q Consensus 190 ~lasg-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~ 268 (318)
.+.+- +..+.|...+++....... ....-...+.|+++|+ .+.+..+=+....|...++.+.............
T Consensus 216 ly~td~~~~~~I~~~~~dG~~~~~~--~~~~l~~P~glavd~~---~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l 290 (400)
T 3p5b_L 216 MYWTDWGTPAKIKKGGLNGVDIYSL--VTENIQWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL 290 (400)
T ss_dssp EEEEECSSSCCEEEEETTSCSCEEE--ECSSCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCCCEEEEECSSTT
T ss_pred EEEEeCCCCCEEEEEeCCCCccEEE--EECCCCceEEEEEEeC---CCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCC
Confidence 33333 3346788888776432211 1223345789999986 3445555556778999988764322211111112
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 269 DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
.....++.. .+..+.+-...+.|..++..++.....+
T Consensus 291 ~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 291 AHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp SSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred CCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 345577773 4455555556677777775555444443
No 265
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.35 E-value=0.078 Score=50.26 Aligned_cols=56 Identities=14% Similarity=0.279 Sum_probs=32.6
Q ss_pred CCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc-eE
Q psy2762 245 DRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA-WQ 304 (318)
Q Consensus 245 D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~-~~ 304 (318)
++.|.-||+.+.. .|+... ..++++-.....|..+..++.|+.++.+|.+++.. |+
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~ 509 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKME----RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK 509 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEE----SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cCeEEEEECCCCCEEeEecC----CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE
Confidence 4667777776543 232211 11222212223567777899999999999888653 44
No 266
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.33 E-value=0.061 Score=45.91 Aligned_cols=197 Identities=13% Similarity=0.155 Sum_probs=101.3
Q ss_pred CcEEEEEECC----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC------CeEEEEEeecCCCC
Q psy2762 80 GTLLASCSYD----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD------GTISFLTYMSDTNS 149 (318)
Q Consensus 80 ~~~las~s~D----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d------~~i~i~~~~~~~~~ 149 (318)
+.+++.|+.+ ..+.++|+.+..+.....+......-..+.+ + +.+++.|+.+ ..+.++|+ ....
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~d~--~~~~ 129 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--E--GKIYTSGGSEVGNSALYLFECYDT--RTES 129 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--T--TEEEEECCBBTTBSCCCCEEEEET--TTTE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--C--CEEEEECCCCCCCcEeeeEEEEeC--CCCc
Confidence 6777788765 6788899988877665444322222222222 3 5677777765 23455554 3333
Q ss_pred cceeeecccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEecC---------CCeEEEEEccCCeEEEEEEcccC
Q psy2762 150 WESRKIAAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC---------DNLIKIWKQEGDKWIEETKLENH 219 (318)
Q Consensus 150 ~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~---------d~~i~iwd~~~~~~~~~~~~~~h 219 (318)
|....-.... .....+.+. ++.++.|+. -..+.+||..++++.....+...
T Consensus 130 W~~~~~~p~~r~~~~~~~~~-------------------~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 190 (306)
T 3ii7_A 130 WHTKPSMLTQRCSHGMVEAN-------------------GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA 190 (306)
T ss_dssp EEEECCCSSCCBSCEEEEET-------------------TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC
T ss_pred eEeCCCCcCCcceeEEEEEC-------------------CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch
Confidence 4321110000 000011110 234555543 34588999998888665443322
Q ss_pred CCCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcceeeEEeeecC-CcEEEEEEcCCCCEEEEEeCC----
Q psy2762 220 SDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFD-DVVWNVSWSLTGDILTVSCGD---- 289 (318)
Q Consensus 220 ~~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~~~~~~~~~~~-~~v~~v~~spdg~~l~s~~~D---- 289 (318)
...-..+.+ ++.+++.|+.+ ..+.+||.... .|......... .....+.+ ++++++.|+.+
T Consensus 191 r~~~~~~~~------~~~i~v~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 261 (306)
T 3ii7_A 191 RKNHGLVFV------KDKIFAVGGQNGLGGLDNVEYYDIKLN-EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGR 261 (306)
T ss_dssp CBSCEEEEE------TTEEEEECCEETTEEBCCEEEEETTTT-EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSB
T ss_pred hhcceEEEE------CCEEEEEeCCCCCCCCceEEEeeCCCC-cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCee
Confidence 222222222 25677777654 35788888764 24321111111 11122222 67788778754
Q ss_pred -CeEEEEEECCCCceEEEeeecc
Q psy2762 290 -NSVSLWKENTDGAWQCITEMGK 311 (318)
Q Consensus 290 -~~v~iW~~~~~~~~~~~~~~~~ 311 (318)
..+.+||..+ .+|..+..|..
T Consensus 262 ~~~~~~yd~~~-~~W~~~~~~~~ 283 (306)
T 3ii7_A 262 LGHILEYNTET-DKWVANSKVRA 283 (306)
T ss_dssp CCEEEEEETTT-TEEEEEEEEEC
T ss_pred eeeEEEEcCCC-CeEEeCCCccc
Confidence 4677777544 58998877653
No 267
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.32 E-value=0.066 Score=46.09 Aligned_cols=186 Identities=8% Similarity=0.043 Sum_probs=101.0
Q ss_pred eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC------------------CCcCeEEEEeeCCCCCcEEE
Q psy2762 69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN------------------HDSSVNSIAWAPKEFGLILA 130 (318)
Q Consensus 69 V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~------------------h~~~v~~v~~~p~~~~~~la 130 (318)
..+++|.+ +++++.++..++.|..|+..++.... +.... ....+..+++.+++ +.+++
T Consensus 21 p~~i~~d~--~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~-g~l~v 96 (322)
T 2fp8_A 21 PNSFTFDS--TNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN-NQLYI 96 (322)
T ss_dssp CCCEECCT--TCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT-TEEEE
T ss_pred ceEEEEcC--CCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCC-CcEEE
Confidence 45677753 47778888889999999987654322 22111 01247889999732 55554
Q ss_pred EeecCCeEEEEEeecCCCCcceeeecc----c-ccccceeeeCC-CCCCCccccccCCCCCCccceEEEe-c--------
Q psy2762 131 CGSSDGTISFLTYMSDTNSWESRKIAA----H-TIGCNAVSWGP-GIGSLSELDLKGSKLGGVAKRLVSG-G-------- 195 (318)
Q Consensus 131 sgs~d~~i~i~~~~~~~~~~~~~~~~~----h-~~~v~~~~~~p-~~~~~~~~~~~~~~~~~~~~~lasg-s-------- 195 (318)
+ ...+.|..++.. .. ....+.. . ....+.++..| + +...++- +
T Consensus 97 ~-d~~~~i~~~d~~--~g--~~~~~~~~~~~~~~~~p~~i~~d~~~-----------------G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 97 V-DCYYHLSVVGSE--GG--HATQLATSVDGVPFKWLYAVTVDQRT-----------------GIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp E-ETTTEEEEECTT--CE--ECEEEESEETTEECSCEEEEEECTTT-----------------CCEEEEESCSSCCTTCH
T ss_pred E-ECCCCEEEEeCC--CC--EEEEecccCCCCcccccceEEEecCC-----------------CEEEEECCccccccccc
Confidence 4 333445555431 11 1111111 1 11235566666 4 2222221 1
Q ss_pred --------CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCcceeeEEeee
Q psy2762 196 --------CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVTWTPFIMNT 266 (318)
Q Consensus 196 --------~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~~~~~~~~~ 266 (318)
.++.|..||..+++..... .+ ....+.|+|+|+ +. ++++-...+.|.+++..............
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~-~~~p~gia~~~d----g~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~ 227 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLLL--KE-LHVPGGAEVSAD----SSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK 227 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEEE--EE-ESCCCEEEECTT----SSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE
T ss_pred ceehcccCCCceEEEEeCCCCEEEEec--cC-CccCcceEECCC----CCEEEEEeCCCCeEEEEECCCCcCCccceEEe
Confidence 2366888887666432211 11 123468999996 55 44444567889999887532111111212
Q ss_pred cCCcEEEEEEcCCCCEEEEEeC
Q psy2762 267 FDDVVWNVSWSLTGDILTVSCG 288 (318)
Q Consensus 267 ~~~~v~~v~~spdg~~l~s~~~ 288 (318)
... ...+++.++|++.++...
T Consensus 228 ~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 228 IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp CSS-EEEEEECTTSCEEEEEEE
T ss_pred CCC-CCCeEECCCCCEEEEecC
Confidence 233 678999999987766544
No 268
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.25 E-value=0.074 Score=45.29 Aligned_cols=199 Identities=17% Similarity=0.285 Sum_probs=100.0
Q ss_pred CcEEEEEECCC-----eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE---EEEEeecCCCCcc
Q psy2762 80 GTLLASCSYDR-----KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI---SFLTYMSDTNSWE 151 (318)
Q Consensus 80 ~~~las~s~Dg-----~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i---~i~~~~~~~~~~~ 151 (318)
+.+++.|+.++ .+.++|+.+..+.....+......-..+.+ + +.+++.|+.++.- .+|-+....+.|.
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--N--GLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T--TEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--C--CEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 67777777653 588889888777655443322222222222 2 5677777765421 1233323333343
Q ss_pred eeeecccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-------CeEEEEEccCCeEEEEEEcccCCCCe
Q psy2762 152 SRKIAAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-------NLIKIWKQEGDKWIEETKLENHSDWV 223 (318)
Q Consensus 152 ~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-------~~i~iwd~~~~~~~~~~~~~~h~~~V 223 (318)
...-.... .....+.+. ++.++.|+.+ ..+.+||..++++.....+......-
T Consensus 138 ~~~~~p~~r~~~~~~~~~-------------------~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 198 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVVG-------------------GLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA 198 (302)
T ss_dssp EECCCSSCCBSCEEEEET-------------------TEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred ecCCCCCcccCceEEEEC-------------------CEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc
Confidence 21111000 000011110 2345555542 35889999988886654443322222
Q ss_pred eEEEEccCCCCCccEEEEEeCCC-----eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC-----eEE
Q psy2762 224 RDVAWAPSWGLSKCMIASCSQDR-----KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-----SVS 293 (318)
Q Consensus 224 ~~v~~sp~~~~~~~~l~s~s~D~-----~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~-----~v~ 293 (318)
..+.+ ++.+++.|+.++ .+.+||..+. .|...........-.++. ..+++.++.|+.++ .+.
T Consensus 199 ~~~~~------~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~ 270 (302)
T 2xn4_A 199 GVGVL------NNLLYAVGGHDGPLVRKSVEVYDPTTN-AWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVE 270 (302)
T ss_dssp EEEEE------TTEEEEECCBSSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEE
T ss_pred cEEEE------CCEEEEECCCCCCcccceEEEEeCCCC-CEeeCCCCCCccccCeEE-EECCEEEEECCcCCCcccccEE
Confidence 22222 256777777653 5888888764 343211111111111122 22677777777653 478
Q ss_pred EEEECCCCceEEEe-eec
Q psy2762 294 LWKENTDGAWQCIT-EMG 310 (318)
Q Consensus 294 iW~~~~~~~~~~~~-~~~ 310 (318)
+||..+ ..|..+. .|.
T Consensus 271 ~yd~~~-~~W~~~~~~~~ 287 (302)
T 2xn4_A 271 YYNPTT-DKWTVVSSCMS 287 (302)
T ss_dssp EEETTT-TEEEECSSCCS
T ss_pred EEcCCC-CeEEECCcccC
Confidence 888654 5898875 443
No 269
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.20 E-value=0.065 Score=51.53 Aligned_cols=63 Identities=17% Similarity=0.137 Sum_probs=39.3
Q ss_pred CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc----------Ce-EEEEecCCCCCcEEEEEECCCeEE
Q psy2762 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG----------PV-WQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~----------~V-~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
+..|+.++.++.|.-+|..+ |+.+=.+..... .+ ..+.+ .+..++.++.|+.|.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~t-----------G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~v~~~dg~l~ 130 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAAS-----------GKELWRYDPEVAKVKARTSCCDAVNRGVAL----WGDKVYVGTLDGRLI 130 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTT-----------CCEEEEECCCCCGGGGGGCTTCSCCCCCEE----EBTEEEEECTTSEEE
T ss_pred CCEEEEECCCCeEEEEECCC-----------ChhceEECCCCCccccccccccCCccceEE----ECCEEEEEcCCCEEE
Confidence 45666677788898888763 344333322111 01 11222 246778888999999
Q ss_pred EEeCCCCcE
Q psy2762 94 IWRGDNGNW 102 (318)
Q Consensus 94 vWd~~~~~~ 102 (318)
.+|..+++.
T Consensus 131 alD~~tG~~ 139 (668)
T 1kv9_A 131 ALDAKTGKA 139 (668)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCCE
Confidence 999998874
No 270
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.17 E-value=0.17 Score=47.83 Aligned_cols=53 Identities=9% Similarity=0.158 Sum_probs=32.7
Q ss_pred CCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 245 DRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 245 D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
++.|.-||+.+.. .|+... ..+++.-.....|.++..++.|+.++.||.+++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE----HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE----SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECCCCCEEEEecC----CCCCcccceEeCCCEEEEECCCCcEEEEECCCCC
Confidence 5778888876643 233221 1122222222346678889999999999987765
No 271
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.16 E-value=0.053 Score=50.94 Aligned_cols=204 Identities=10% Similarity=0.011 Sum_probs=107.4
Q ss_pred CCcEEEEEEC-CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEe-e-CCCCCcEEEEee------------------cCCe
Q psy2762 79 FGTLLASCSY-DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW-A-PKEFGLILACGS------------------SDGT 137 (318)
Q Consensus 79 ~~~~las~s~-Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~-~-p~~~~~~lasgs------------------~d~~ 137 (318)
||++|+.... +.+|.+-|+.+.++..+.+++. ....-.+++ + |+ +.++.+++ .++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~--~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPR--SNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSB--CSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCC--CcEEEEecccccccCCCCcccccccccCce
Confidence 4666666554 5679999999877655555542 234667787 4 77 44555553 2346
Q ss_pred EEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCC----------C---------------CCCccceEE
Q psy2762 138 ISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS----------K---------------LGGVAKRLV 192 (318)
Q Consensus 138 i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~----------~---------------~~~~~~~la 192 (318)
+.+.|.....- ..++.--. ...-++.+|+............ . .-..+++..
T Consensus 177 vtvID~~t~~v---~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 177 FTAVDADKWEV---AWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEETTTTEE---EEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred EEEEECCCCeE---EEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 66666532211 11121001 1233445554322111111000 0 000011111
Q ss_pred EecCCCeEEEEEccC--CeEEEEEEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCcc---------ee
Q psy2762 193 SGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVT---------WT 260 (318)
Q Consensus 193 sgs~d~~i~iwd~~~--~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~---------~~ 260 (318)
. +.|.|.|..+ +... ...+..- ....++.++|+ |+ .++++..+.+|.++|+.+... ..
T Consensus 253 i----~~V~VID~~~~~~~~~-~~~Ipvg-~~PhGv~~sPD----Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~ 322 (595)
T 1fwx_A 253 L----NGVKVVDGRKEASSLF-TRYIPIA-NNPHGCNMAPD----KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSA 322 (595)
T ss_dssp E----TTEEEEECSGGGCCSS-EEEEEEE-SSCCCEEECTT----SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGG
T ss_pred E----CcEEEEeCcccCCcee-EEEEecC-CCceEEEEcCC----CCEEEEeCCCCCeEEEEECcccccccccccCcccc
Confidence 1 4588999776 3210 1122111 12468999997 55 555555789999999885310 00
Q ss_pred eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762 261 PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299 (318)
Q Consensus 261 ~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~ 299 (318)
...........+.++|+|||...++.--|++|..|+++.
T Consensus 323 v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 323 VVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred eEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 111112234678999999994344444699999999765
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.15 E-value=0.14 Score=46.46 Aligned_cols=209 Identities=9% Similarity=0.055 Sum_probs=110.2
Q ss_pred eEEEEecCC-CCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeec
Q psy2762 69 VWQVAWAHP-QFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMS 145 (318)
Q Consensus 69 V~~v~~~~~-~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~ 145 (318)
-..++|.+. .++. |..+...+.|+.+|+.++.... +.........|++.++. .++++..... .-.++.+..
T Consensus 141 P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~---~~~~~~~P~giavd~dG--~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 141 IWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDI---KTTNIGQCADVNFTLNG--DMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEE---ECCCCSCEEEEEECTTC--CEEEEECCSCTTSEEEEEECG
T ss_pred CceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEE---eecCCCCccEEEECCCC--CEEEEcCCCCcccceEEEEEC
Confidence 457888531 1244 4444444889999987664322 22334568899999984 4555543211 111111111
Q ss_pred CCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE-EEEEEcccCCCCee
Q psy2762 146 DTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW-IEETKLENHSDWVR 224 (318)
Q Consensus 146 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~-~~~~~~~~h~~~V~ 224 (318)
.. .+..............++++|.. +..+++-..++.|+.+|..++.. ...... +....-.
T Consensus 215 ~~-~~~~~~~~~~~~~P~giavd~~~----------------G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~ 276 (433)
T 4hw6_A 215 AS-GFTERLSLCNARGAKTCAVHPQN----------------GKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNF 276 (433)
T ss_dssp GG-TTCCEEEEEECSSBCCCEECTTT----------------CCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCE
T ss_pred CC-CeeccccccccCCCCEEEEeCCC----------------CeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcc
Confidence 11 11100111111223456666631 34445555677899998876653 222222 2223345
Q ss_pred EEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCcc--eeeEEeeec---------------CCcEEEEEE---------c
Q psy2762 225 DVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVT--WTPFIMNTF---------------DDVVWNVSW---------S 277 (318)
Q Consensus 225 ~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~--~~~~~~~~~---------------~~~v~~v~~---------s 277 (318)
.++|+|+ +. +.++-.....|+.++...... ..+....+. -.....+++ .
T Consensus 277 ~ia~dpd----G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 277 HIVWHPT----GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp EEEECTT----SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred cEEEeCC----CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 7999997 55 556666678899987653110 001111110 123667999 7
Q ss_pred CCCCEEEEEeCCCeEEEEEECCCCceEEEe
Q psy2762 278 LTGDILTVSCGDNSVSLWKENTDGAWQCIT 307 (318)
Q Consensus 278 pdg~~l~s~~~D~~v~iW~~~~~~~~~~~~ 307 (318)
++|+++++=...+.|+.++ ..|...++.
T Consensus 353 ~~g~lyvaD~~n~~I~~~~--~~G~v~t~~ 380 (433)
T 4hw6_A 353 DEYDFYFCDRDSHTVRVLT--PEGRVTTYA 380 (433)
T ss_dssp CCEEEEEEETTTTEEEEEC--TTSEEEEEE
T ss_pred CCCcEEEEECCCCEEEEEC--CCCCEEEEE
Confidence 7887776666667777775 566666554
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.06 E-value=0.17 Score=45.85 Aligned_cols=238 Identities=9% Similarity=0.030 Sum_probs=123.4
Q ss_pred eeeeeeecCC---CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC--
Q psy2762 15 MIHDAEMDYL---GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD-- 89 (318)
Q Consensus 15 ~v~~~~~~~~---g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D-- 89 (318)
....++++|+ |+++++-. .+.|+.+|... +. +.++.........+++++ +|+++++-...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~-~~~I~~id~~~-----------g~-v~~~~~~~~~P~giavd~--dG~lyVad~~~~~ 204 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQ-RDAFRHVDFVN-----------QY-VDIKTTNIGQCADVNFTL--NGDMVVVDDQSSD 204 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECB-TSCEEEEETTT-----------TE-EEEECCCCSCEEEEEECT--TCCEEEEECCSCT
T ss_pred CCceEEEccccCCCEEEEEeC-CCCEEEEECCC-----------CE-EEEeecCCCCccEEEECC--CCCEEEEcCCCCc
Confidence 3567889984 55555433 38899998752 33 334444445578899964 47744443211
Q ss_pred -Ce-EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccccccee
Q psy2762 90 -RK-VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAV 165 (318)
Q Consensus 90 -g~-v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~ 165 (318)
.. +...+...+ ......+. .-.....+++.|++ +.++++-..++.|..++...+. . ...+. +.......+
T Consensus 205 ~~~gv~~~~~~~~-~~~~~~~~-~~~~P~giavd~~~-G~lyv~d~~~~~V~~~d~~~g~--~-~~~~~~~~~~~~~~~i 278 (433)
T 4hw6_A 205 TNTGIYLFTRASG-FTERLSLC-NARGAKTCAVHPQN-GKIYYTRYHHAMISSYDPATGT--L-TEEEVMMDTKGSNFHI 278 (433)
T ss_dssp TSEEEEEECGGGT-TCCEEEEE-ECSSBCCCEECTTT-CCEEECBTTCSEEEEECTTTCC--E-EEEEEECSCCSSCEEE
T ss_pred ccceEEEEECCCC-eecccccc-ccCCCCEEEEeCCC-CeEEEEECCCCEEEEEECCCCe--E-EEEEeccCCCCCcccE
Confidence 22 222232221 11001111 12334667888842 5566665566777666542111 1 01111 111112358
Q ss_pred eeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC--CeEEEEEEccc---------------CCCCeeEEE
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG--DKWIEETKLEN---------------HSDWVRDVA 227 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~--~~~~~~~~~~~---------------h~~~V~~v~ 227 (318)
+++|+ +. .+++-...+.|+.++.+. +.+.....+.+ .-.....++
T Consensus 279 a~dpd-----------------G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~gia 341 (433)
T 4hw6_A 279 VWHPT-----------------GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGI 341 (433)
T ss_dssp EECTT-----------------SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEE
T ss_pred EEeCC-----------------CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEE
Confidence 88886 33 455556677888877652 22110001111 112356688
Q ss_pred E---------ccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee------------------cCCcEEEEEEc-CC
Q psy2762 228 W---------APSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT------------------FDDVVWNVSWS-LT 279 (318)
Q Consensus 228 ~---------sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~------------------~~~~v~~v~~s-pd 279 (318)
+ .+ .+.++++=.....|+.++..... ..+.+ .-.....|+++ ++
T Consensus 342 v~~n~~y~~dd~----~g~lyvaD~~n~~I~~~~~~G~v----~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~ 413 (433)
T 4hw6_A 342 FVKNEAYAGEED----EYDFYFCDRDSHTVRVLTPEGRV----TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKR 413 (433)
T ss_dssp EEECGGGTTSSC----CEEEEEEETTTTEEEEECTTSEE----EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTT
T ss_pred EEccccccccCC----CCcEEEEECCCCEEEEECCCCCE----EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCC
Confidence 8 44 36666666667788888754311 11110 01246799999 67
Q ss_pred CCEEEEEeCCCeEEEEEEC
Q psy2762 280 GDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 280 g~~l~s~~~D~~v~iW~~~ 298 (318)
|.++++=...+.||..+.+
T Consensus 414 g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 414 KCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEecC
Confidence 7766655567788877653
No 274
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.01 E-value=0.29 Score=47.81 Aligned_cols=245 Identities=11% Similarity=0.021 Sum_probs=135.0
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe----cccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL----KGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~----~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
...|.++..+++|.+.+ |+.++-|..|+.... .-...... ......|.++... .+|. |..|+.
T Consensus 309 ~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~---------~~~~~~~~~~~~~l~~~~V~~i~~d--~~g~-lWiGt~ 375 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRN---------RFKNIRNIPYKNSLSDNVVSCIVED--KDKN-LWIGTN 375 (795)
T ss_dssp SSCEEEEEECTTSCEEE-EESSSCEEEECGGGG---------SSEEECCCTTSSSCSCSSEEEEEEC--TTSC-EEEEES
T ss_pred CCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcc---------cceEEcCCCCCCCCCCCeeEEEEEC--CCCC-EEEEEC
Confidence 35789999999998765 666777888876421 00111100 0124568888764 2344 566788
Q ss_pred CCeEEEEeCCCCcEEEEEEec------CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-----
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYN------NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA----- 157 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~------~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~----- 157 (318)
++-+..|+..++.......-. .....|.++...++ +.++-.|+.++-|..++...+. ...+..
T Consensus 376 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~~lWigt~~~Gl~~~d~~~~~----~~~~~~~~~~l 449 (795)
T 4a2l_A 376 DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK--KSLVYIGTHAGGLSILHRNSGQ----VENFNQRNSQL 449 (795)
T ss_dssp SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT--TTEEEEEETTTEEEEEETTTCC----EEEECTTTSCC
T ss_pred CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC--CCEEEEEeCcCceeEEeCCCCc----EEEeecCCCCc
Confidence 878888998766543321100 12356888887765 5534556766667777643221 111110
Q ss_pred cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc----ccCCCCeeEEEEccCCC
Q psy2762 158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL----ENHSDWVRDVAWAPSWG 233 (318)
Q Consensus 158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~----~~h~~~V~~v~~sp~~~ 233 (318)
+...|.++...++ +. |-.|+. +.|.+||..++++...... .-....|+++...++
T Consensus 450 ~~~~v~~i~~d~~-----------------g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-- 508 (795)
T 4a2l_A 450 VNENVYAILPDGE-----------------GN-LWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSH-- 508 (795)
T ss_dssp SCSCEEEEEECSS-----------------SC-EEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTT--
T ss_pred CCCeeEEEEECCC-----------------CC-EEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCC--
Confidence 1123444443332 22 444444 4588899887754322111 112356899988875
Q ss_pred CCccEEEEEeCCCeEEEEEcCCCcceeeE---Eee-ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762 234 LSKCMIASCSQDRKVIIWTSNDYVTWTPF---IMN-TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305 (318)
Q Consensus 234 ~~~~~l~s~s~D~~i~vw~~~~~~~~~~~---~~~-~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~ 305 (318)
+.+.+.. . +-|..|+..+... ... ... -....|.++...++|++.+++. . .+..|+... +++..
T Consensus 509 --g~lWigt-~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~-~~~~~ 576 (795)
T 4a2l_A 509 --KRLWIGG-E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKD-KQIKR 576 (795)
T ss_dssp --CCEEEEE-S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTT-TEEEE
T ss_pred --CCEEEEe-C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCC-CcEEE
Confidence 5555443 3 4478888755321 100 000 1235799999999998765443 3 567777433 34443
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.98 E-value=0.15 Score=43.94 Aligned_cols=232 Identities=11% Similarity=-0.022 Sum_probs=124.7
Q ss_pred CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC---cEEEEEEecC
Q psy2762 34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG---NWFKYYEYNN 110 (318)
Q Consensus 34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~---~~~~~~~~~~ 110 (318)
...|+..|++.. .....+. ......++.|.+ ..+.++.+-...+.|..+++... ..... .+..
T Consensus 9 ~~~I~~i~~~~~-----------~~~~~~~-~~~~p~g~~~d~-~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~-~~~~ 74 (316)
T 1ijq_A 9 RHEVRKMTLDRS-----------EYTSLIP-NLRNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-VISR 74 (316)
T ss_dssp BSSEEEEETTSC-----------CCEEEEC-SCSSEEEEEEET-TTTEEEEEETTTTEEEEEEC--------CEE-EECS
T ss_pred CCeEEEEECCCc-----------ceEehhc-CCCceEEEEEEe-CCCEEEEEECCCCcEEEEECCCCCCCcccEE-EEeC
Confidence 357888888632 1222222 234567899864 33556666666789999987751 11111 1222
Q ss_pred CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccc
Q psy2762 111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189 (318)
Q Consensus 111 h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 189 (318)
.-.....+++.+.. +.++.+-...+.|.+.+.. +. ....+. ........++..|.. +.
T Consensus 75 ~~~~p~glavd~~~-~~ly~~d~~~~~I~~~~~~-g~---~~~~~~~~~~~~P~~iavdp~~----------------g~ 133 (316)
T 1ijq_A 75 DIQAPDGLAVDWIH-SNIYWTDSVLGTVSVADTK-GV---KRKTLFRENGSKPRAIVVDPVH----------------GF 133 (316)
T ss_dssp SCSCCCEEEEETTT-TEEEEEETTTTEEEEEETT-SS---SEEEEEECTTCCEEEEEEETTT----------------TE
T ss_pred CCCCcCEEEEeecC-CeEEEEECCCCEEEEEeCC-CC---ceEEEEECCCCCcceEEeCCCC----------------CE
Confidence 22345788888653 4556665667788777642 11 111111 111234566666642 22
Q ss_pred eEEEecC-CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC
Q psy2762 190 RLVSGGC-DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD 268 (318)
Q Consensus 190 ~lasgs~-d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~ 268 (318)
.+.+... .+.|...+++....... ....-...+.|+++|+ .+.+..+-+..+.|..++..+.............
T Consensus 134 ly~~d~~~~~~I~~~~~dG~~~~~~--~~~~~~~P~gla~d~~---~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~ 208 (316)
T 1ijq_A 134 MYWTDWGTPAKIKKGGLNGVDIYSL--VTENIQWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL 208 (316)
T ss_dssp EEEEECSSSCEEEEEETTSCCEEEE--ECSSCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEEEEECTTTT
T ss_pred EEEEccCCCCeEEEEcCCCCCeEEE--EECCCCCceEEEEecc---CCEEEEEECCCCeEEEEecCCCceEEEeecCCcc
Confidence 3333333 36788888765432111 1222345789999986 3555566566788999998753321111111112
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 269 DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
.....+++. .+..+.+-...+.|...+..++...+.+
T Consensus 209 ~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 209 AHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp SSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 345678885 4556666666778888775555444443
No 276
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.95 E-value=0.15 Score=43.54 Aligned_cols=114 Identities=20% Similarity=0.291 Sum_probs=63.6
Q ss_pred ceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcc
Q psy2762 189 KRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVT 258 (318)
Q Consensus 189 ~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~ 258 (318)
..++.|+.+ +.+.+||..++++.....+......-..+.+ ++.+++.|+.+ ..+.+||+.+. .
T Consensus 170 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~v~~yd~~~~-~ 242 (308)
T 1zgk_A 170 LLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL------HNCIYAAGGYDGQDQLNSVERYDVETE-T 242 (308)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCBCSSSBCCCEEEEETTTT-E
T ss_pred EEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE------CCEEEEEeCCCCCCccceEEEEeCCCC-c
Confidence 455666654 4588999988888655443322222223333 25677777765 45888888764 3
Q ss_pred eeeEEeeecCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEECCCCceEEEeeecc
Q psy2762 259 WTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAWQCITEMGK 311 (318)
Q Consensus 259 ~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-----~~v~iW~~~~~~~~~~~~~~~~ 311 (318)
|...........-.++.. -++++++.|+.+ ..+.++|..+ .+|..+..|-.
T Consensus 243 W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~ 298 (308)
T 1zgk_A 243 WTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDT-DTWSEVTRMTS 298 (308)
T ss_dssp EEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTT-TEEEEEEECSS
T ss_pred EEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCC-CEEeecCCCCC
Confidence 432111111111112222 267777777754 3567777554 68998877654
No 277
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.90 E-value=0.37 Score=47.13 Aligned_cols=230 Identities=7% Similarity=0.040 Sum_probs=123.3
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-----ccccCeEEEEecCCCCCcEEEEEE
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-----GHSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----~h~~~V~~v~~~~~~~~~~las~s 87 (318)
...|.++...++|++|-.|+.++-|.+||... +. ...+. .....|.++... .+|.+.+ |+
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~-----------~~-~~~~~~~~~~l~~~~v~~i~~d--~~g~lwi-gt 469 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS-----------GQ-VENFNQRNSQLVNENVYAILPD--GEGNLWL-GT 469 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTT-----------CC-EEEECTTTSCCSCSCEEEEEEC--SSSCEEE-EE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCC-----------Cc-EEEeecCCCCcCCCeeEEEEEC--CCCCEEE-Ee
Confidence 35788898889998444567777789998752 22 22222 234578888864 3466444 44
Q ss_pred CCCeEEEEeCCCCcEEEEEEe----cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee--e--cccc
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEY----NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK--I--AAHT 159 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~--~--~~h~ 159 (318)
.+ -+.+||..++........ ......|.++...++ +.+.+ |+.+| +..++..... ..... . ....
T Consensus 470 ~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~--g~lWi-gt~~G-l~~~~~~~~~--~~~~~~~~~~~l~~ 542 (795)
T 4a2l_A 470 LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSH--KRLWI-GGEEG-LSVFKQEGLD--IQKASILPVSNVTK 542 (795)
T ss_dssp SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTT--CCEEE-EESSC-EEEEEEETTE--EEECCCSCSCGGGG
T ss_pred cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCC--CCEEE-EeCCc-eEEEeCCCCe--EEEecCCCCCCCCC
Confidence 54 477788876643322111 112356888887776 54444 34444 6666653321 10000 0 0112
Q ss_pred cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC-CCCeeEEEEccCCCCCccE
Q psy2762 160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH-SDWVRDVAWAPSWGLSKCM 238 (318)
Q Consensus 160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~~~ 238 (318)
..+.++...++ +. |-.|+.. .|..||..++++.......+- ...|.++...++ |.+
T Consensus 543 ~~i~~i~~d~~-----------------g~-lWigT~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~----g~l 599 (795)
T 4a2l_A 543 LFTNCIYEASN-----------------GI-IWVGTRE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSF----GRL 599 (795)
T ss_dssp SCEEEEEECTT-----------------SC-EEEEESS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTT----SCE
T ss_pred CeeEEEEECCC-----------------CC-EEEEeCC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCC----CCE
Confidence 23444444443 23 3334444 578888877654332222222 345888888774 555
Q ss_pred EEEEeCCCeEEEEEcCCCcceeeEEee---ecC-CcE--EEEEEcCCCCEEEEEeCCCeEE
Q psy2762 239 IASCSQDRKVIIWTSNDYVTWTPFIMN---TFD-DVV--WNVSWSLTGDILTVSCGDNSVS 293 (318)
Q Consensus 239 l~s~s~D~~i~vw~~~~~~~~~~~~~~---~~~-~~v--~~v~~spdg~~l~s~~~D~~v~ 293 (318)
.+++ . +-|..|+..+.. ..... +.. ..+ .++...++|++++ |+.+|-++
T Consensus 600 Wi~t-~-~Gl~~~~~~~~~---~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~~Gl~~ 654 (795)
T 4a2l_A 600 WLST-N-RGISCFNPETEK---FRNFTESDGLQSNQFNTASYCRTSVGQMYF-GGINGITT 654 (795)
T ss_dssp EEEE-T-TEEEEEETTTTE---EEEECGGGTCSCSCEEEEEEEECTTSCEEE-EETTEEEE
T ss_pred EEEc-C-CceEEEcCCCCc---EEEcCCcCCCccccCccCceeECCCCeEEE-ecCCceEE
Confidence 5544 3 457778876532 11111 111 122 5677788998765 55566443
No 278
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.78 E-value=0.15 Score=43.32 Aligned_cols=189 Identities=12% Similarity=0.129 Sum_probs=95.0
Q ss_pred CCCEEEEeeCC----CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC------CeEE
Q psy2762 24 LGLYLATCSSD----HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD------RKVI 93 (318)
Q Consensus 24 ~g~~l~s~s~D----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D------g~v~ 93 (318)
++.+++.||.+ ..+.+||.... ....+..+......-..+.+ ++++++.|+.+ ..+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~---------~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~ 121 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKD---------SWYSKLGPPTPRDSLAACAA----EGKIYTSGGSEVGNSALYLFE 121 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTT---------EEEEEECCSSCCBSCEEEEE----TTEEEEECCBBTTBSCCCCEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCC---------eEEECCCCCccccceeEEEE----CCEEEEECCCCCCCcEeeeEE
Confidence 56667777755 56777877522 23333332211111122222 36777888776 4688
Q ss_pred EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC---------eEEEEEeecCCCCcceeeecccc-cccc
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG---------TISFLTYMSDTNSWESRKIAAHT-IGCN 163 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~---------~i~i~~~~~~~~~~~~~~~~~h~-~~v~ 163 (318)
+||+.+..+.....+......-.++.+ + +.+++.|+.++ .+.++|+ ....|....-.... ....
T Consensus 122 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~ 195 (306)
T 3ii7_A 122 CYDTRTESWHTKPSMLTQRCSHGMVEA--N--GLIYVCGGSLGNNVSGRVLNSCEVYDP--ATETWTELCPMIEARKNHG 195 (306)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEE--T--TEEEEECCEESCTTTCEECCCEEEEET--TTTEEEEECCCSSCCBSCE
T ss_pred EEeCCCCceEeCCCCcCCcceeEEEEE--C--CEEEEECCCCCCCCcccccceEEEeCC--CCCeEEECCCccchhhcce
Confidence 899988877655333322122222222 2 46677766432 2445554 33334322110000 0000
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccE
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~ 238 (318)
.+.. . ++.++.|+.+ ..+.+||..++++.....+.........+.+ ++.+
T Consensus 196 ~~~~-~------------------~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~i 250 (306)
T 3ii7_A 196 LVFV-K------------------DKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV------GSIV 250 (306)
T ss_dssp EEEE-T------------------TEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE------TTEE
T ss_pred EEEE-C------------------CEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE------CCEE
Confidence 1111 0 2456666653 3588999998888665444333222233333 2567
Q ss_pred EEEEeCC-----CeEEEEEcCCC
Q psy2762 239 IASCSQD-----RKVIIWTSNDY 256 (318)
Q Consensus 239 l~s~s~D-----~~i~vw~~~~~ 256 (318)
++.|+.+ ..+.+||....
T Consensus 251 ~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 251 YVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEEECBCSSSBCCEEEEEETTTT
T ss_pred EEEeCcCCCeeeeeEEEEcCCCC
Confidence 7888754 45778887663
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.70 E-value=0.52 Score=46.14 Aligned_cols=212 Identities=11% Similarity=-0.052 Sum_probs=111.8
Q ss_pred cccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE--EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEE
Q psy2762 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW--FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT 142 (318)
Q Consensus 65 h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~ 142 (318)
....+.+++|.. ..+.++++-...+.|..+++..... .....+...-.....|++.+.. +.++.+-...+.|.+.+
T Consensus 422 ~~~~~~gl~~d~-~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~-~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 422 NLRNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp SCSSEEEEEEET-TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT-TEEEEEETTTTEEEEEE
T ss_pred CCCceEEEeecc-cCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC-CcEEEEecCCCeEEEEe
Confidence 345677888864 3456666666678888888764211 0111122223446678888764 45666666777887776
Q ss_pred eecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cCCCeEEEEEccCCeEEEEEEcccCC
Q psy2762 143 YMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDNLIKIWKQEGDKWIEETKLENHS 220 (318)
Q Consensus 143 ~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iwd~~~~~~~~~~~~~~h~ 220 (318)
+. +. ....+. ........+++.|.. +..+.+- +..+.|.+.+++....... +...-
T Consensus 500 ld-G~---~~~~l~~~~l~~P~gIaVDp~~----------------g~LYwtD~g~~~~I~~~~~dG~~~~~l--v~~~l 557 (791)
T 3m0c_C 500 TK-GV---KRKTLFRENGSKPRAIVVDPVH----------------GFMYWTDWGTPAKIKKGGLNGVDIYSL--VTENI 557 (791)
T ss_dssp TT-SS---SEEEEEECTTCCEEEEEEETTT----------------TEEEEEECSSSCEEEEEETTSCCEEEE--ECSSC
T ss_pred CC-CC---eEEEEEeCCCCCcceEEEecCC----------------CCEEEecCCCCCeEEEEecCCCceEEE--EeCCC
Confidence 52 11 111221 222234567777642 2223332 3336788888876543222 22333
Q ss_pred CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762 221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~--~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~ 298 (318)
.+.+.|+++|. .+.+.++=.....|...++.+..... .... ......+|++.. ++++++-...+.|..-+..
T Consensus 558 ~~P~GLavD~~---~~~LYwaD~~~~~I~~~d~dG~~~~~--v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 558 QWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNRKT--ILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp SCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEE--EEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecC---CCeEEEEeCCCCcEEEEecCCCceEE--EecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCC
Confidence 56789999986 35555554556788888886644221 2221 122345777642 3344444445666555544
Q ss_pred CCCceEEE
Q psy2762 299 TDGAWQCI 306 (318)
Q Consensus 299 ~~~~~~~~ 306 (318)
.+.....+
T Consensus 632 tG~~~~~l 639 (791)
T 3m0c_C 632 TGSDVNLL 639 (791)
T ss_dssp TCCCCEEE
T ss_pred CCcceEEe
Confidence 44444444
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.65 E-value=0.31 Score=42.74 Aligned_cols=198 Identities=14% Similarity=0.113 Sum_probs=104.9
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCC--CCCc---E-EEEEEC--CCeEEEE
Q psy2762 24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHP--QFGT---L-LASCSY--DRKVIIW 95 (318)
Q Consensus 24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~--~~~~---~-las~s~--Dg~v~vW 95 (318)
...+++.....+-+.|||+. |+.+..+.. +.++.+...+. -.|+ + ++|.-. +.+|.++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~------------G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf 104 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD------------GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY 104 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT------------SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEE
T ss_pred CccEEEEEcCCCCEEEEcCC------------CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEE
Confidence 44566666777899999995 467777753 45666655310 0011 2 333333 5799999
Q ss_pred eC--CCCcEEEEEEe--c-CCC-cCeEEEEe--eCCCCCcEEEEeecCCeEEEEEeecCCC-Ccc---eeeecccccccc
Q psy2762 96 RG--DNGNWFKYYEY--N-NHD-SSVNSIAW--APKEFGLILACGSSDGTISFLTYMSDTN-SWE---SRKIAAHTIGCN 163 (318)
Q Consensus 96 d~--~~~~~~~~~~~--~-~h~-~~v~~v~~--~p~~~~~~lasgs~d~~i~i~~~~~~~~-~~~---~~~~~~h~~~v~ 163 (318)
++ .++........ + ... ..++.+++ +|.....++.....++.+..|++..... ... ++.+.. ...+.
T Consensus 105 ~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~E 183 (355)
T 3amr_A 105 AIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTE 183 (355)
T ss_dssp EECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEE
T ss_pred EECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcc
Confidence 66 34332111000 0 011 45666777 6653234566777889998888754321 111 122211 12233
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc-----CCeEEEEEEc--ccCCCCeeEEEEccCCCCCc
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE-----GDKWIEETKL--ENHSDWVRDVAWAPSWGLSK 236 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~-----~~~~~~~~~~--~~h~~~V~~v~~sp~~~~~~ 236 (318)
.+...+. ..+|..+-+|..|..++.+ +++. ...+ ..-...+..|..-+.....+
T Consensus 184 gcvvDd~-----------------~g~Lyv~eEd~GIw~~da~p~~~~~~~~--v~~~~~g~l~aDvEGLai~~~~~g~g 244 (355)
T 3amr_A 184 GMAADDE-----------------YGRLYIAEEDEAIWKFSAEPDGGSNGTV--IDRADGRHLTRDIEGLTIYYAADGKG 244 (355)
T ss_dssp EEEEETT-----------------TTEEEEEETTTEEEEEECSTTSCSCCEE--EEEBSSSSBCSCEEEEEEEECGGGCE
T ss_pred eEEEcCC-----------------CCeEEEecccceEEEEeCCcCCCCCceE--EEEecCCccccCcceEEEEecCCCCE
Confidence 4444443 2468888898665555533 1222 2222 22234688888854311113
Q ss_pred cEEEEEeCCCeEEEEEcCC
Q psy2762 237 CMIASCSQDRKVIIWTSND 255 (318)
Q Consensus 237 ~~l~s~s~D~~i~vw~~~~ 255 (318)
.+|+|+-.+.+..||+.+.
T Consensus 245 yLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 245 YLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EEEEEEGGGTEEEEEESST
T ss_pred EEEEEcCCCCEEEEEECCC
Confidence 3455554678999999863
No 281
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.56 E-value=0.33 Score=42.13 Aligned_cols=223 Identities=9% Similarity=0.105 Sum_probs=121.3
Q ss_pred ecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCC----C--cCeEEEEe---eCCCCCcEEEEe
Q psy2762 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNH----D--SSVNSIAW---APKEFGLILACG 132 (318)
Q Consensus 62 ~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h----~--~~v~~v~~---~p~~~~~~lasg 132 (318)
+......-.+++|. +..+.+++|.-+.++|..|+...+....+ .+.+- . ..+..|.| .|+ +.++++.
T Consensus 8 ~~~~~~yPE~~~wd-~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~--grL~vv~ 83 (334)
T 2p9w_A 8 VKVKNLTPEDTIYD-RTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNS--KRLFAVM 83 (334)
T ss_dssp ECCTTCCCSCEEEE-TTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSC--CEEEEEE
T ss_pred ecCcccCCcCccCc-CCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCC--CcEEEEE
Confidence 33444445578885 34566666666899999999875543333 34321 1 13578999 566 6677654
Q ss_pred ec-------------CCeEEEEEee---cCCCCcceeeecccc-----------cccceeeeCCCCCCCccccccCCCCC
Q psy2762 133 SS-------------DGTISFLTYM---SDTNSWESRKIAAHT-----------IGCNAVSWGPGIGSLSELDLKGSKLG 185 (318)
Q Consensus 133 s~-------------d~~i~i~~~~---~~~~~~~~~~~~~h~-----------~~v~~~~~~p~~~~~~~~~~~~~~~~ 185 (318)
.. +..|..+|+. .++..+. ..+.... ..++.++..++
T Consensus 84 ~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~~--------------- 147 (334)
T 2p9w_A 84 KNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDRD--------------- 147 (334)
T ss_dssp EETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECTT---------------
T ss_pred cccccccccccccCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECCC---------------
Confidence 32 5667777764 2332221 1111111 13556666654
Q ss_pred CccceEEEecCC-CeEEEEEccCCeEEEEE-Ec--ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceee
Q psy2762 186 GVAKRLVSGGCD-NLIKIWKQEGDKWIEET-KL--ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTP 261 (318)
Q Consensus 186 ~~~~~lasgs~d-~~i~iwd~~~~~~~~~~-~~--~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~ 261 (318)
++..++++.- +.|...+.+........ .. .......+.|.++|+ +..|+....++.|..+|+.....+..
T Consensus 148 --GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pd----g~~Liv~~~~g~L~~fD~~~pv~~~v 221 (334)
T 2p9w_A 148 --GNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPH----SNKLIAFGGPRALTAFDVSKPYAWPE 221 (334)
T ss_dssp --SCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETT----TTEEEEESSSSSEEEEECSSSSCCCE
T ss_pred --CCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCC----CCEEEEEcCCCeEEEEcCCCCcceee
Confidence 4556666666 66666665544221111 11 111223579999996 65566555599999999875432111
Q ss_pred EEee--e---cCCcEEE-EEEcCCCCE-EEEEeCCCeEEEEEECCCCceEEEeeeccccc
Q psy2762 262 FIMN--T---FDDVVWN-VSWSLTGDI-LTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 314 (318)
Q Consensus 262 ~~~~--~---~~~~v~~-v~~spdg~~-l~s~~~D~~v~iW~~~~~~~~~~~~~~~~~~~ 314 (318)
. +. + .-...-. +.--.+|+. |++.+..+.+.+- ..++ |+....++....
T Consensus 222 ~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~--S~Dg-W~sa~~~g~~~~ 277 (334)
T 2p9w_A 222 P-VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFR--SWDN-WKSANIKKTKRS 277 (334)
T ss_dssp E-CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEE--CSST-TSEEEEEEEECG
T ss_pred c-ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEE--CCCC-cceeEEeeeecC
Confidence 1 11 1 1111222 233347888 5555556554443 3344 998888877654
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.53 E-value=0.66 Score=45.18 Aligned_cols=247 Identities=10% Similarity=0.017 Sum_probs=128.0
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEE----ecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE----LKGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~----~~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
...|+++...++|.+.+ |...+-|.++|............ .-..+.. .......|.++... .+| .|-.|..
T Consensus 257 ~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~-~f~~~~~~~~~~~l~~~~v~~i~~D--~~g-~lWigt~ 331 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQI-RFEFIREGDNNYSLSNASARYIFQD--SFN-NIWIGTW 331 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EESSSCEEEEETTCC----------CEEECBCSSTTSBSSSCEEEEEEC--SSC-CEEEEEB
T ss_pred CceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeecc-ccccccCCCCCCCCCCCeEEEEEEe--CCC-CEEEEec
Confidence 34688888888888666 45545677888752200000000 0000000 01234568888764 234 4667777
Q ss_pred CCeEEEEeCCCCcEEEEEEe-------cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec----c
Q psy2762 89 DRKVIIWRGDNGNWFKYYEY-------NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA----A 157 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~-------~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~----~ 157 (318)
++-|..++............ ......|.++...++ +.+ -.|+.++-|..++.... ...... .
T Consensus 332 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~l-Wigt~~~Gl~~~~~~~~----~~~~~~~~~~~ 404 (781)
T 3v9f_A 332 GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQ--GKL-WIGTDGGGINVFENGKR----VAIYNKENREL 404 (781)
T ss_dssp SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTT--SCE-EEEEBSSCEEEEETTEE----EEECC-----C
T ss_pred CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCC--CCE-EEEeCCCcEEEEECCCC----eEEEccCCCCC
Confidence 77888888776543222100 012346888887765 443 34565555666653211 111110 0
Q ss_pred cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762 158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237 (318)
Q Consensus 158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~ 237 (318)
....|.++...++ + .|-.|+.++.|..+|..++++............|.++...++ +.
T Consensus 405 ~~~~v~~i~~d~~-----------------g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~----g~ 462 (781)
T 3v9f_A 405 LSNSVLCSLKDSE-----------------G-NLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN----KK 462 (781)
T ss_dssp CCSBEEEEEECTT-----------------S-CEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT----SE
T ss_pred CCcceEEEEECCC-----------------C-CEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC----CC
Confidence 1122334433322 2 355577767788898876654221110123456888888774 55
Q ss_pred EEEEEeCCCeEEEEEcCCCcceeeEEee----ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 238 MIASCSQDRKVIIWTSNDYVTWTPFIMN----TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 238 ~l~s~s~D~~i~vw~~~~~~~~~~~~~~----~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
+.+ +.. +-|.+++..+... ...... .....|.++...++|++.+.+..+| |..++.
T Consensus 463 lwi-gt~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~ 522 (781)
T 3v9f_A 463 IWI-GTH-AGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTP 522 (781)
T ss_dssp EEE-EET-TEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECT
T ss_pred EEE-EEC-CceEEEeCCCCeE-EecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeC
Confidence 444 444 4588888765431 111110 0135799999999998765443344 555653
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.50 E-value=0.011 Score=57.29 Aligned_cols=202 Identities=11% Similarity=-0.032 Sum_probs=100.8
Q ss_pred cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC----CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEE
Q psy2762 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT 142 (318)
Q Consensus 67 ~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~----~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~ 142 (318)
..+.+++|.+ ..+.++++-...+.|..+++.. ..... .+...-.....|++.+.. +.++++-...+.|.+.+
T Consensus 406 ~~p~gla~d~-~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~--~i~~~~~~P~glavD~~~-g~LY~tD~~~~~I~v~d 481 (699)
T 1n7d_A 406 RNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VISRDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVAD 481 (699)
T ss_dssp TTCCCCEEET-TTTEEEECCTTTTSBEEEESCCCCC-CCCCC--BCCSCC--CCCEECCCSS-SBCEECCTTTSCEEEEB
T ss_pred cceEEEcccc-ccCeEEEEecCCCeEEEEecCCCCCCcceEE--EEeCCCCCcceEEEEeeC-CcEEEEeccCCeEEEEe
Confidence 3456778853 2344555544567888888764 11101 111111234567777543 44555555566777765
Q ss_pred eecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cCCCeEEEEEccCCeEEEEEEcccCC
Q psy2762 143 YMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDNLIKIWKQEGDKWIEETKLENHS 220 (318)
Q Consensus 143 ~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iwd~~~~~~~~~~~~~~h~ 220 (318)
.... ....+. ........+++.|..+ ..+++- +..+.|.+++++...... .....-
T Consensus 482 ~dg~----~~~~l~~~~~~~P~giavDp~~g----------------~ly~td~~~~~~I~~~~~dG~~~~~--l~~~~l 539 (699)
T 1n7d_A 482 TKGV----KRKTLFREQGSKPRAIVVDPVHG----------------FMYWTDWGTPAKIKKGGLNGVDIYS--LVTENI 539 (699)
T ss_dssp SSSC----CEEEECCCSSCCCCCEECCSSSS----------------CCEECCCSSSCCEEBCCSSSCCCCE--ESCSSC
T ss_pred cCCC----ceEEEEeCCCCCcceEEEccCCC----------------cEEEcccCCCCeEEEEeCCCCCeeE--EEeCCC
Confidence 4211 111111 1112235566666422 222322 223677777765432111 111223
Q ss_pred CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762 221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298 (318)
Q Consensus 221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~ 298 (318)
...+.|+|+|+ .+.++++-+..+.|.++++.+.... .... ........+++..+ .++++....+.|..++..
T Consensus 540 ~~PnGlavd~~---~~~LY~aD~~~~~I~~~d~dG~~~~--~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 540 QWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SSCCCEEECTT---TCCEEEEETTTTEEEEECSSSSCCE--EECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred CCccEEEEecc---CCEEEEEecCCCeEEEEccCCCceE--EEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 34678999986 3556666667788999988653321 1111 11122345666544 455555566788877744
Q ss_pred CC
Q psy2762 299 TD 300 (318)
Q Consensus 299 ~~ 300 (318)
++
T Consensus 614 ~G 615 (699)
T 1n7d_A 614 TG 615 (699)
T ss_dssp TE
T ss_pred CC
Confidence 43
No 284
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.49 E-value=0.041 Score=49.46 Aligned_cols=124 Identities=12% Similarity=0.121 Sum_probs=79.4
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCC-CcceEEEEecc------cccCeEEEEecCCC--CCcEEEE
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHS-QKGTLIAELKG------HSGPVWQVAWAHPQ--FGTLLAS 85 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~------h~~~V~~v~~~~~~--~~~~las 85 (318)
.|..+.+||+|++||..+ +.+|.|-.+..+.......+ ......+++.- ...+|..+.| ||- .+..|+.
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlW-HPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLF-HPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEE-CTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEe-ccccCCCCeEEE
Confidence 467799999999999876 67999999863211111100 01112344443 2467999999 663 2568999
Q ss_pred EECCCeEEEEeCCCCcEEEE--------EEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEE
Q psy2762 86 CSYDRKVIIWRGDNGNWFKY--------YEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF 140 (318)
Q Consensus 86 ~s~Dg~v~vWd~~~~~~~~~--------~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i 140 (318)
--.|++|++||+......++ +.+......|.+++|.++.-..++++.+.+|-|.-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 99999999999875321122 11222335788999999754456655667777753
No 285
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.44 E-value=0.35 Score=40.96 Aligned_cols=189 Identities=19% Similarity=0.250 Sum_probs=92.1
Q ss_pred CCCEEEEeeCCC-----cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC-----eEE
Q psy2762 24 LGLYLATCSSDH-----TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR-----KVI 93 (318)
Q Consensus 24 ~g~~l~s~s~D~-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg-----~v~ 93 (318)
++.+++.||.++ .+.+||.... ....+..+......-..+.+ ++.+++.|+.++ .+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~---------~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~ 127 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKD---------QWTSVANMRDRRSTLGAAVL----NGLLYAVGGFDGSTGLSSVE 127 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTT---------EEEEECCCSSCCBSCEEEEE----TTEEEEEEEECSSCEEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCC---------ceeeCCCCCccccceEEEEE----CCEEEEEcCCCCCccCceEE
Confidence 566666777553 4777776521 22333222211111122222 367777787664 577
Q ss_pred EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-------eEEEEEeecCCCCcceeeeccc-cccccee
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-------TISFLTYMSDTNSWESRKIAAH-TIGCNAV 165 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-------~i~i~~~~~~~~~~~~~~~~~h-~~~v~~~ 165 (318)
++|+.+..+.....+........++.+ + +.+++.|+.++ .+.++|+ ....|....-... ......+
T Consensus 128 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~~~ 201 (302)
T 2xn4_A 128 AYNIKSNEWFHVAPMNTRRSSVGVGVV--G--GLLYAVGGYDVASRQCLSTVECYNA--TTNEWTYIAEMSTRRSGAGVG 201 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEE--T--TEEEEECCEETTTTEECCCEEEEET--TTTEEEEECCCSSCCBSCEEE
T ss_pred EEeCCCCeEeecCCCCCcccCceEEEE--C--CEEEEEeCCCCCCCccccEEEEEeC--CCCcEEECCCCccccccccEE
Confidence 888888777655433322222222222 2 46777776532 2445554 3333432111100 0000111
Q ss_pred eeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240 (318)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 240 (318)
.+. +..++.|+.+ +.+.+||..++++.....+......-..+.+ ++.+++
T Consensus 202 ~~~-------------------~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~------~~~i~v 256 (302)
T 2xn4_A 202 VLN-------------------NLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV------NGLLYV 256 (302)
T ss_dssp EET-------------------TEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE------TTEEEE
T ss_pred EEC-------------------CEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE------CCEEEE
Confidence 111 2456667654 3688999998888665443322221122222 256777
Q ss_pred EEeCCC-----eEEEEEcCCC
Q psy2762 241 SCSQDR-----KVIIWTSNDY 256 (318)
Q Consensus 241 s~s~D~-----~i~vw~~~~~ 256 (318)
.|+.++ .+.+||..+.
T Consensus 257 ~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 257 VGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp ECCBCSSSBCCCEEEEETTTT
T ss_pred ECCcCCCcccccEEEEcCCCC
Confidence 777654 3777877653
No 286
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.38 E-value=0.49 Score=42.00 Aligned_cols=180 Identities=8% Similarity=-0.036 Sum_probs=98.9
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVS 166 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~ 166 (318)
....|+..++........ +.. ...+..++|.+.+ +.++.+-...+.|..++..... ...+. ........++
T Consensus 94 ~~~~I~~i~~~~~~~~~~--~~~-~~~~~gl~~d~~~-~~ly~~D~~~~~I~r~~~~g~~----~~~~~~~~~~~p~gla 165 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLL--LNN-LENAIALDFHHRR-ELVFWSDVTLDRILRANLNGSN----VEEVVSTGLESPGGLA 165 (386)
T ss_dssp CBSCEEEECTTSCCCEEE--ECS-CSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCC----EEEEECSSCSCCCCEE
T ss_pred cCccceeeccCCCcEEEE--ecC-CCccEEEEEecCC-CeEEEEeCCCCcEEEEecCCCC----cEEEEeCCCCCccEEE
Confidence 346677788776543332 222 3457889999864 5566665566777666542111 11111 1111234455
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD- 245 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D- 245 (318)
+.+.. +..+++-...+.|.+.+++..... ..+.......+.|++.|. .+.++.+-...
T Consensus 166 vd~~~----------------g~lY~~d~~~~~I~~~~~dg~~~~--~l~~~~l~~P~giavdp~---~g~ly~td~~~~ 224 (386)
T 3v65_B 166 VDWVH----------------DKLYWTDSGTSRIEVANLDGAHRK--VLLWQSLEKPRAIALHPM---EGTIYWTDWGNT 224 (386)
T ss_dssp EETTT----------------TEEEEEETTTTEEEECBTTSCSCE--EEECSSCSCEEEEEEETT---TTEEEEEECSSS
T ss_pred EEeCC----------------CeEEEEcCCCCeEEEEeCCCCceE--EeecCCCCCCcEEEEEcC---CCeEEEeccCCC
Confidence 55421 244556666678888887654321 112233345689999986 35555555444
Q ss_pred CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEEC
Q psy2762 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 298 (318)
Q Consensus 246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~ 298 (318)
+.|...+...... .............++|+|++..|.-+- ..+.|+.++.+
T Consensus 225 ~~I~r~~~dG~~~--~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 225 PRIEASSMDGSGR--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp CEEEEEETTSCSC--EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CEEEEEeCCCCCc--EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 6788777765331 112222234578999998766665553 45566666543
No 287
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.37 E-value=0.83 Score=44.50 Aligned_cols=236 Identities=11% Similarity=0.036 Sum_probs=125.2
Q ss_pred cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe----cccccCeEEEEecCCCCCcEEEEEEC
Q psy2762 13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL----KGHSGPVWQVAWAHPQFGTLLASCSY 88 (318)
Q Consensus 13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~----~~h~~~V~~v~~~~~~~~~~las~s~ 88 (318)
...|.++...++|.+.+ |+.++-|.+||... +. ...+ ......|.++... .++. |..|..
T Consensus 362 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~-----------~~-~~~~~~~~~~~~~~v~~i~~d--~~g~-lWigt~ 425 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLWI-GTDGGGINVFENGK-----------RV-AIYNKENRELLSNSVLCSLKD--SEGN-LWFGTY 425 (781)
T ss_dssp SSCEEEEEECTTSCEEE-EEBSSCEEEEETTE-----------EE-EECC-----CCCSBEEEEEEC--TTSC-EEEEET
T ss_pred CcceEEEEEcCCCCEEE-EeCCCcEEEEECCC-----------Ce-EEEccCCCCCCCcceEEEEEC--CCCC-EEEEec
Confidence 35688898888888665 55566688888642 11 1111 1234678888764 2355 455777
Q ss_pred CCeEEEEeCCCCcEEEEEEe-cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc----cccccc
Q psy2762 89 DRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA----HTIGCN 163 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~----h~~~v~ 163 (318)
++-+..++..+++... +.. ......|.++...++ +.+. .|+.. -+..++..... +....... ....+.
T Consensus 426 ~~Gl~~~~~~~~~~~~-~~~~~~~~~~v~~i~~d~~--g~lw-igt~~-Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~ 498 (781)
T 3v9f_A 426 LGNISYYNTRLKKFQI-IELEKNELLDVRVFYEDKN--KKIW-IGTHA-GVFVIDLASKK--VIHHYDTSNSQLLENFVR 498 (781)
T ss_dssp TEEEEEECSSSCEEEE-CCSTTTCCCCEEEEEECTT--SEEE-EEETT-EEEEEESSSSS--CCEEECTTTSSCSCSCEE
T ss_pred cCCEEEEcCCCCcEEE-eccCCCCCCeEEEEEECCC--CCEE-EEECC-ceEEEeCCCCe--EEecccCcccccccceeE
Confidence 7778888877664322 111 113457888877765 5444 34444 46666643221 11110000 012334
Q ss_pred eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-CCCCeeEEEEccCCCCCccEEEEE
Q psy2762 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASC 242 (318)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~ 242 (318)
++...++ + .|-.|+.++-|..||.+++++.......+ ....|.++...++ |.+.++
T Consensus 499 ~i~~d~~-----------------g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~----g~lWi~- 555 (781)
T 3v9f_A 499 SIAQDSE-----------------G-RFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSK----GQMWLA- 555 (781)
T ss_dssp EEEECTT-----------------C-CEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTT----SCEEEE-
T ss_pred EEEEcCC-----------------C-CEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCC----CCEEEE-
Confidence 4443332 2 34455554457778877665432211111 2346888888774 555544
Q ss_pred eCCCeEEEEEcCCCcceeeEEeeec-CCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762 243 SQDRKVIIWTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGDILTVSCGDNSVSLWK 296 (318)
Q Consensus 243 s~D~~i~vw~~~~~~~~~~~~~~~~-~~~v~~v~~spdg~~l~s~~~D~~v~iW~ 296 (318)
..+|-+..|+..+..........+. ...|.++...++|++.+++ .+| +..++
T Consensus 556 T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~ 608 (781)
T 3v9f_A 556 TGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-NTG-ISCYI 608 (781)
T ss_dssp ETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC-SSC-EEEEE
T ss_pred ECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc-CCc-eEEEE
Confidence 3466547887765431100000111 2357889999999876544 444 55555
No 288
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.35 E-value=0.56 Score=42.35 Aligned_cols=157 Identities=9% Similarity=0.073 Sum_probs=87.7
Q ss_pred eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC----eEEEEEee
Q psy2762 69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG----TISFLTYM 144 (318)
Q Consensus 69 V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~----~i~i~~~~ 144 (318)
...+++++ .++..|..+...+.|+.+|+..+..... .........|+|+++. ..++++...++ .+.+.+.
T Consensus 139 P~~lavdp-~~~g~Lyv~d~~~~I~~id~~~~~v~~~---~~~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 139 AVWLSFDP-KNHNHLYLVGEQHPTRLIDFEKEYVSTV---YSGLSKVRTICWTHEA-DSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CCEEEEET-TEEEEEEEEEBTEEEEEEETTTTEEEEE---ECCCSCEEEEEECTTS-SEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCEEEECC-CCCCeEEEEeCCCcEEEEECCCCEEEEE---ecCCCCcceEEEeCCC-CEEEEEeCCCCcccceEEEEeC-
Confidence 35677752 1134455555558888899876543222 2234567899999983 22555544322 2222221
Q ss_pred cCCCCcc-eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCe
Q psy2762 145 SDTNSWE-SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWV 223 (318)
Q Consensus 145 ~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V 223 (318)
... +. ...+. .......++++|+. +..+++-..++.|+.++..++.......... ....
T Consensus 213 ~g~--~~~~~~l~-~~~~p~giavdp~~----------------g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P 272 (430)
T 3tc9_A 213 ESG--FKVITELT-KGQNCNGAETHPIN----------------GELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWE 272 (430)
T ss_dssp GGT--SCSEEEEE-ECSSCCCEEECTTT----------------CCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCC
T ss_pred CCc--eeeeeeec-cCCCceEEEEeCCC----------------CEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcc
Confidence 111 11 11111 12234566777732 3455666677889999988765423333322 2446
Q ss_pred eEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCC
Q psy2762 224 RDVAWAPSWGLSKC-MIASCSQDRKVIIWTSND 255 (318)
Q Consensus 224 ~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~ 255 (318)
+.|+|+|+ +. ++++-.....|..++...
T Consensus 273 ~gia~~pd----G~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 273 FHIQFHPS----GNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEECTT----SSEEEEEETTTTEEEEEEEET
T ss_pred eeEEEcCC----CCEEEEEECCCCEEEEEeCCc
Confidence 78999996 55 556666778899987653
No 289
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.29 E-value=0.42 Score=40.37 Aligned_cols=189 Identities=14% Similarity=0.191 Sum_probs=95.0
Q ss_pred CCCEEEEeeCC-----CcEEEEEcCCCcCCCCCCCCc---ceEEEEecccccCeEEEEecCCCCCcEEEEEECCC-----
Q psy2762 24 LGLYLATCSSD-----HTVKVFNLDRNLKKDDSHSQK---GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR----- 90 (318)
Q Consensus 24 ~g~~l~s~s~D-----~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg----- 90 (318)
++.+++.||.+ ..+.+||.... . ...+..+......-..+.+ ++++++.|+.++
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~---------~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~ 128 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTAD---------EDGVWYSVAPMNVRRGLAGATTL----GDMIYVSGGFDGSRRHT 128 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCC---------TTCCCEEECCCSSCCBSCEEEEE----TTEEEEECCBCSSCBCC
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCC---------CCCeeEECCCCCCCccceeEEEE----CCEEEEEcccCCCcccc
Confidence 56677777755 45778887532 2 3333222211111112222 367777777543
Q ss_pred eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-----eEEEEEeecCCCCcceeeecccc-cccce
Q psy2762 91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-----TISFLTYMSDTNSWESRKIAAHT-IGCNA 164 (318)
Q Consensus 91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-----~i~i~~~~~~~~~~~~~~~~~h~-~~v~~ 164 (318)
.+.++|+.+..+.....+......-.++.+ + +.+++.|+.++ .+.++|+ ....|....-.... .....
T Consensus 129 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~--~~~~W~~~~~~p~~r~~~~~ 202 (301)
T 2vpj_A 129 SMERYDPNIDQWSMLGDMQTAREGAGLVVA--S--GVIYCLGGYDGLNILNSVEKYDP--HTGHWTNVTPMATKRSGAGV 202 (301)
T ss_dssp EEEEEETTTTEEEEEEECSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEET--TTTEEEEECCCSSCCBSCEE
T ss_pred eEEEEcCCCCeEEECCCCCCCcccceEEEE--C--CEEEEECCCCCCcccceEEEEeC--CCCcEEeCCCCCcccccceE
Confidence 688889888877665544322222222222 3 56777777653 3445554 33334321110000 00011
Q ss_pred eeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762 165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239 (318)
Q Consensus 165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l 239 (318)
+.+. ++.++.|+.+ +.+.+||..++++.....+.........+.+ ++.++
T Consensus 203 ~~~~-------------------~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~i~ 257 (301)
T 2vpj_A 203 ALLN-------------------DHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL------RGRLY 257 (301)
T ss_dssp EEET-------------------TEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE------TTEEE
T ss_pred EEEC-------------------CEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE------CCEEE
Confidence 1111 2456667664 4689999998888665444322222222222 25677
Q ss_pred EEEeCC-----CeEEEEEcCCC
Q psy2762 240 ASCSQD-----RKVIIWTSNDY 256 (318)
Q Consensus 240 ~s~s~D-----~~i~vw~~~~~ 256 (318)
+.|+.+ ..+.+||.+..
T Consensus 258 v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 258 AIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EECCBCSSSBEEEEEEEETTTT
T ss_pred EEcCcCCCcccccEEEEcCCCC
Confidence 777765 34677777653
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.06 E-value=0.041 Score=53.22 Aligned_cols=205 Identities=8% Similarity=-0.074 Sum_probs=101.7
Q ss_pred eeeeeeecCCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762 15 MIHDAEMDYLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
.+..++|++.+..|+- -...+.|+.++++.... .......+.........+++.. ..+.++++-...+.|.
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~-------~~~~~~~i~~~~~~P~glavD~-~~g~LY~tD~~~~~I~ 478 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-------VSSYDTVISRDIQAPDGLAVDW-IHSNIYWTDSVLGTVS 478 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC--------CCCCCBCCSCC--CCCEECCC-SSSBCEECCTTTSCEE
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCC-------CcceEEEEeCCCCCcceEEEEe-eCCcEEEEeccCCeEE
Confidence 4556788876555544 34567888888763100 0000111111112234566542 2356666655678899
Q ss_pred EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-CeEEEEEeecCCCCcceeeec-ccccccceeeeCCCC
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-GTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGI 171 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~ 171 (318)
+.++.......+ +.........|++.|.. +.++.+-... +.|...++. +.. ...+. ......+.++++|+.
T Consensus 479 v~d~dg~~~~~l--~~~~~~~P~giavDp~~-g~ly~td~~~~~~I~~~~~d-G~~---~~~l~~~~l~~PnGlavd~~~ 551 (699)
T 1n7d_A 479 VADTKGVKRKTL--FREQGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLN-GVD---IYSLVTENIQWPNGITLDLLS 551 (699)
T ss_dssp EEBSSSCCEEEE--CCCSSCCCCCEECCSSS-SCCEECCCSSSCCEEBCCSS-SCC---CCEESCSSCSSCCCEEECTTT
T ss_pred EEecCCCceEEE--EeCCCCCcceEEEccCC-CcEEEcccCCCCeEEEEeCC-CCC---eeEEEeCCCCCccEEEEeccC
Confidence 998875532222 22222345778898864 4444443222 455544321 111 11111 111224567787753
Q ss_pred CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762 172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw 251 (318)
+..+++-+..+.|..+++....................|++.. +.++++....+.|..+
T Consensus 552 ----------------~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~-----~~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 552 ----------------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-----DKVFWTDIINEAIFSA 610 (699)
T ss_dssp ----------------CCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET-----TEEEEECSTTTCEEEE
T ss_pred ----------------CEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC-----CEEEEEeCCCCeEEEE
Confidence 2344555666789999886543222211111112234555543 3556666667888888
Q ss_pred EcCC
Q psy2762 252 TSND 255 (318)
Q Consensus 252 ~~~~ 255 (318)
+..+
T Consensus 611 d~~~ 614 (699)
T 1n7d_A 611 NRLT 614 (699)
T ss_dssp ETTT
T ss_pred EccC
Confidence 7643
No 291
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.03 E-value=0.61 Score=39.77 Aligned_cols=112 Identities=14% Similarity=0.273 Sum_probs=59.9
Q ss_pred ceEEEecC------CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC-----eEEEEEcCCCc
Q psy2762 189 KRLVSGGC------DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR-----KVIIWTSNDYV 257 (318)
Q Consensus 189 ~~lasgs~------d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~-----~i~vw~~~~~~ 257 (318)
+.++.|+. -+.+.+||..++++.....+......-..+.+ ++.+++.|+.++ .+.+||..+.
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~yd~~~~- 222 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH------DGRIIVAAGVTDTGLTSSAEVYSITDN- 222 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEEEEECSSSEEEEEEEEETTTT-
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE------CCEEEEEeccCCCCccceEEEEECCCC-
Confidence 45566665 24688999998888665444322222222222 256777787654 4778888664
Q ss_pred ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC--------------eEEEEEECCCCceEEEeee
Q psy2762 258 TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN--------------SVSLWKENTDGAWQCITEM 309 (318)
Q Consensus 258 ~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~--------------~v~iW~~~~~~~~~~~~~~ 309 (318)
.|...........-.++. .-++++++.|+.++ .+.++|..+ .+|..+...
T Consensus 223 ~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~~~~ 286 (315)
T 4asc_A 223 KWAPFEAFPQERSSLSLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEE-KKWEGVLRE 286 (315)
T ss_dssp EEEEECCCSSCCBSCEEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT-TEEEEEESC
T ss_pred eEEECCCCCCcccceeEE-EECCEEEEECCccccCcCCccccccccCcEEEecCCC-ChhhhhccC
Confidence 353321111111111222 22677777777642 345565443 589988443
No 292
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.94 E-value=0.7 Score=39.66 Aligned_cols=205 Identities=8% Similarity=-0.066 Sum_probs=109.6
Q ss_pred eeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762 15 MIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI 93 (318)
Q Consensus 15 ~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~ 93 (318)
....++|++.+. +..+-...+.|..++++... ........+.........+++.. ..+.++++-...+.|.
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~-------~~~~~~~~~~~~~~~p~glavd~-~~~~ly~~d~~~~~I~ 102 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAH-------GVSSYDTVISRDIQAPDGLAVDW-IHSNIYWTDSVLGTVS 102 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC---------------CEEEECSSCSCCCEEEEET-TTTEEEEEETTTTEEE
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCC-------CCcccEEEEeCCCCCcCEEEEee-cCCeEEEEECCCCEEE
Confidence 356788987654 55555567889888876210 00011112222223456777653 2355556656778999
Q ss_pred EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-CeEEEEEeecCCCCcceeeec-ccccccceeeeCCCC
Q psy2762 94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-GTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGI 171 (318)
Q Consensus 94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~ 171 (318)
+.+.......... ...-.....+++.|.+ +.++.+.... +.|...+. .+.. ...+. ..-...+.++++|+.
T Consensus 103 ~~~~~g~~~~~~~--~~~~~~P~~iavdp~~-g~ly~~d~~~~~~I~~~~~-dG~~---~~~~~~~~~~~P~gla~d~~~ 175 (316)
T 1ijq_A 103 VADTKGVKRKTLF--RENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGL-NGVD---IYSLVTENIQWPNGITLDLLS 175 (316)
T ss_dssp EEETTSSSEEEEE--ECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEET-TSCC---EEEEECSSCSCEEEEEEETTT
T ss_pred EEeCCCCceEEEE--ECCCCCcceEEeCCCC-CEEEEEccCCCCeEEEEcC-CCCC---eEEEEECCCCCceEEEEeccC
Confidence 9998754432222 2223457899999864 5555554333 55655443 1111 11111 111234567777652
Q ss_pred CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762 172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw 251 (318)
+..+.+-+..+.|..+|++...................+++.. +.++.+-...+.|..+
T Consensus 176 ----------------~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-----~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 176 ----------------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-----DKVFWTDIINEAIFSA 234 (316)
T ss_dssp ----------------TEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-----TEEEEEETTTTEEEEE
T ss_pred ----------------CEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-----CEEEEEECCCCeEEEE
Confidence 2344555666789999987643222222211223356777742 5566666677888888
Q ss_pred EcCC
Q psy2762 252 TSND 255 (318)
Q Consensus 252 ~~~~ 255 (318)
+..+
T Consensus 235 ~~~~ 238 (316)
T 1ijq_A 235 NRLT 238 (316)
T ss_dssp ETTT
T ss_pred eCCC
Confidence 7643
No 293
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.85 E-value=0.66 Score=38.70 Aligned_cols=204 Identities=12% Similarity=0.071 Sum_probs=116.0
Q ss_pred CCCcceeeeeeecCCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-cccCeEEEEecCCCCCcEEEEEE
Q psy2762 10 TGHEDMIHDAEMDYLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSGPVWQVAWAHPQFGTLLASCS 87 (318)
Q Consensus 10 ~gH~~~v~~~~~~~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~~~~~~~~las~s 87 (318)
.|=.+.+..++++|++..|++ ...++.|...|.. +++++++.- -......+++.. ++.++++.-
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~------------g~v~~~i~l~g~~D~EGIa~~~--~g~~~vs~E 88 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN------------GDLIRTIPLDFVKDLETIEYIG--DNQFVISDE 88 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT------------CCEEEEEECSSCSSEEEEEECS--TTEEEEEET
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC------------CCEEEEEecCCCCChHHeEEeC--CCEEEEEEC
Confidence 355568999999998776655 5556666666653 456665532 124567788753 466656544
Q ss_pred CCCeEEEEeCCCCcE---EEEEEec----CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec--CCCCcceeee---
Q psy2762 88 YDRKVIIWRGDNGNW---FKYYEYN----NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS--DTNSWESRKI--- 155 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~---~~~~~~~----~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~--~~~~~~~~~~--- 155 (318)
.++.+.++++..... .....+. ........|++.|.. +.++++. ......+|.+.- ......+...
T Consensus 89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~-~~L~va~-E~~p~~i~~~~g~~~~~~l~i~~~~~~ 166 (255)
T 3qqz_A 89 RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQD-HTFWFFK-EKNPIEVYKVNGLLSSNELHISKDKAL 166 (255)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTT-TEEEEEE-ESSSEEEEEEESTTCSSCCEEEECHHH
T ss_pred CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCC-CEEEEEE-CcCCceEEEEcccccCCceeeecchhh
Confidence 567888887654331 1222221 123456899999984 3445444 333455665531 1111111100
Q ss_pred c--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc-cCC------CCeeEE
Q psy2762 156 A--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE-NHS------DWVRDV 226 (318)
Q Consensus 156 ~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~-~h~------~~V~~v 226 (318)
. .+......++++|.. ++.++...+.+.|-++|.+.. ......+. +.. ..-..|
T Consensus 167 ~~~~~~~d~S~l~~dp~t----------------g~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGi 229 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQK----------------NTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGV 229 (255)
T ss_dssp HHTCCSSCCCEEEEETTT----------------TEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEE
T ss_pred ccccccCCceeEEEcCCC----------------CeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCee
Confidence 0 122245667777742 567888888899999998765 34444554 211 235789
Q ss_pred EEccCCCCCccEEEEEeCCCeEEEE
Q psy2762 227 AWAPSWGLSKCMIASCSQDRKVIIW 251 (318)
Q Consensus 227 ~~sp~~~~~~~~l~s~s~D~~i~vw 251 (318)
+|.|+ |. |..+|+-..+.++
T Consensus 230 a~d~~----G~-lyIvsE~n~~y~f 249 (255)
T 3qqz_A 230 AMDAS----GN-IYIVSEPNRFYRF 249 (255)
T ss_dssp EECTT----CC-EEEEETTTEEEEE
T ss_pred EECCC----CC-EEEEcCCceEEEE
Confidence 99996 55 4444676644444
No 294
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.75 E-value=0.8 Score=38.90 Aligned_cols=145 Identities=14% Similarity=0.214 Sum_probs=72.4
Q ss_pred CcEEEEEECC-----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-----eEEEEEeecCCCC
Q psy2762 80 GTLLASCSYD-----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-----TISFLTYMSDTNS 149 (318)
Q Consensus 80 ~~~las~s~D-----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-----~i~i~~~~~~~~~ 149 (318)
+++++.|+.+ ..+.++|+.+..+.....+......-.++.+ + +.+++.|+.++ .+.++|+ ....
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~--~~~~ 195 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--N--RLLYAVGGFDGTNRLNSAECYYP--ERNE 195 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEET--TTTE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--C--CEEEEEeCCCCCCcCceEEEEeC--CCCe
Confidence 5677777654 3678889888776554333322222222222 2 56777777653 3445554 3333
Q ss_pred cceeeeccc-ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCe
Q psy2762 150 WESRKIAAH-TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWV 223 (318)
Q Consensus 150 ~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V 223 (318)
|....-... ......+.+. +..++.|+.+ ..+.+||+.++++.....+......-
T Consensus 196 W~~~~~~p~~r~~~~~~~~~-------------------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 256 (308)
T 1zgk_A 196 WRMITAMNTIRSGAGVCVLH-------------------NCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL 256 (308)
T ss_dssp EEECCCCSSCCBSCEEEEET-------------------TEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC
T ss_pred EeeCCCCCCccccceEEEEC-------------------CEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce
Confidence 332111000 0000111110 2456666654 46899999988886554433222222
Q ss_pred eEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCC
Q psy2762 224 RDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSND 255 (318)
Q Consensus 224 ~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~ 255 (318)
..+.. ++.+++.|+.+ ..+.+||..+
T Consensus 257 ~~~~~------~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 257 GITVH------QGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp EEEEE------TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred EEEEE------CCEEEEEcCcCCCcccceEEEEcCCC
Confidence 22222 25677777754 3466777655
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.67 E-value=1 Score=39.42 Aligned_cols=102 Identities=16% Similarity=0.117 Sum_probs=56.3
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec---ccccCeEEEEecCCC---CCcEEEEEEC
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK---GHSGPVWQVAWAHPQ---FGTLLASCSY 88 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~---~h~~~V~~v~~~~~~---~~~~las~s~ 88 (318)
.-..++|.|+|+++++ ..++.|.+++ + . ....+..+. ........++|. |. .+.+.++-..
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~-~-g---------~~~~~~~~~v~~~g~~~p~gia~~-pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR-E-G---------RLSTYAELSVYHRGESGLLGLALH-PRFPQEPYVYAYRTV 98 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE-T-T---------EEEEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE-C-C---------CccEeecceEeecCCCCceeEEEC-CCCCCCCEEEEEEec
Confidence 4567999999997765 5569999887 3 2 112222222 123456788985 32 2444444443
Q ss_pred C-----CeEEEEeCCCCcE---EEEE-Eec---CCCcCeEEEEeeCCCCCcEEEE
Q psy2762 89 D-----RKVIIWRGDNGNW---FKYY-EYN---NHDSSVNSIAWAPKEFGLILAC 131 (318)
Q Consensus 89 D-----g~v~vWd~~~~~~---~~~~-~~~---~h~~~v~~v~~~p~~~~~~las 131 (318)
. ..|..++...+.. ..+. .+. ........++|.|+ +.++++
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd--G~Lyv~ 151 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD--GMLYVT 151 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT--SCEEEE
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC--CCEEEE
Confidence 2 5677777654321 1111 233 11123468999998 445554
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.40 E-value=1.2 Score=38.43 Aligned_cols=233 Identities=7% Similarity=-0.043 Sum_probs=123.8
Q ss_pred CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc
Q psy2762 34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS 113 (318)
Q Consensus 34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~ 113 (318)
...|+..+++... ..... .+. ....+.++.|.. ..+.++.+-...+.|..+++..+...... +...-.
T Consensus 12 ~~~I~~i~l~~~~-------~~~~~--~~~-~~~~~~~ld~d~-~~~~lyw~D~~~~~I~r~~~~g~~~~~~~-~~~~l~ 79 (318)
T 3sov_A 12 RRDLRLVDATNGK-------ENATI--VVG-GLEDAAAVDFVF-SHGLIYWSDVSEEAIKRTEFNKTESVQNV-VVSGLL 79 (318)
T ss_dssp EEEEEEEETTCTT-------SCCEE--EEE-EEEEEEEEEEEG-GGTEEEEEETTTTEEEEEETTSSSCCCEE-EEECCS
T ss_pred cCeEEEEECCCCc-------eEEEE--Eec-CCCccEEEEEEe-CCCEEEEEECCCCcEEEEEccCCCceEEE-EcCCCC
Confidence 4678888886320 00111 111 223466888864 34666666666788988988765311111 111123
Q ss_pred CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEE
Q psy2762 114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVS 193 (318)
Q Consensus 114 ~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~las 193 (318)
....+++.+.. +.++.+-...+.|.+.+.. +.. ....+.........++..|.. +..+.+
T Consensus 80 ~p~glavd~~~-g~ly~~d~~~~~I~~~~~d-G~~--~~~l~~~~~~~P~giavdp~~----------------g~ly~t 139 (318)
T 3sov_A 80 SPDGLACDWLG-EKLYWTDSETNRIEVSNLD-GSL--RKVLFWQELDQPRAIALDPSS----------------GFMYWT 139 (318)
T ss_dssp CCCEEEEETTT-TEEEEEETTTTEEEEEETT-SCS--CEEEECSSCSSEEEEEEEGGG----------------TEEEEE
T ss_pred CccEEEEEcCC-CeEEEEECCCCEEEEEECC-CCc--EEEEEeCCCCCccEEEEeCCC----------------CEEEEE
Confidence 45678888753 4566665666777777642 111 111111111223455666532 222333
Q ss_pred e-cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEE
Q psy2762 194 G-GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVW 272 (318)
Q Consensus 194 g-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~ 272 (318)
- +..+.|...+++....... ....-..-+.|+++|+ .+.+..+=+..+.|..++..+.... ...........
T Consensus 140 d~~~~~~I~r~~~dG~~~~~~--~~~~l~~Pnglavd~~---~~~lY~aD~~~~~I~~~d~dG~~~~--~~~~~~~~~P~ 212 (318)
T 3sov_A 140 DWGEVPKIERAGMDGSSRFII--INSEIYWPNGLTLDYE---EQKLYWADAKLNFIHKSNLDGTNRQ--AVVKGSLPHPF 212 (318)
T ss_dssp ECSSSCEEEEEETTSCSCEEE--ECSSCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCE--EEECSCCSCEE
T ss_pred ecCCCCEEEEEEcCCCCeEEE--EECCCCCccEEEEecc---CCEEEEEECCCCEEEEEcCCCCceE--EEecCCCCCce
Confidence 2 3457788888765432111 1222344689999996 3555565566788999988753321 11221234456
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 273 NVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 273 ~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
.+++. .+..+.+-...+.|...+..++...+.+
T Consensus 213 glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 213 ALTLF-EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEe-CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 77775 3445555556778888876555544443
No 297
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.39 E-value=1.2 Score=38.56 Aligned_cols=42 Identities=12% Similarity=0.280 Sum_probs=22.7
Q ss_pred eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762 199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246 (318)
Q Consensus 199 ~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~ 246 (318)
.+.+||+.+++|.....+......-.++.+ ++.+++.||.+.
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~i~v~GG~~~ 327 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPW------NNSLLIIGGETA 327 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEE------TTEEEEEEEECG
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEe------CCEEEEEeeeCC
Confidence 477899988888766555443332223322 256777787653
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.21 E-value=1.4 Score=38.46 Aligned_cols=66 Identities=11% Similarity=0.050 Sum_probs=38.6
Q ss_pred CeeEEEEccCCC---CCccEEEEEeCCCeEEEEEcCCCccee-eEE-eeecCCcEEEEEEcCCCCEEEEEe
Q psy2762 222 WVRDVAWAPSWG---LSKCMIASCSQDRKVIIWTSNDYVTWT-PFI-MNTFDDVVWNVSWSLTGDILTVSC 287 (318)
Q Consensus 222 ~V~~v~~sp~~~---~~~~~l~s~s~D~~i~vw~~~~~~~~~-~~~-~~~~~~~v~~v~~spdg~~l~s~~ 287 (318)
....+.|..... ..+.++++.-..+.|...++....... ... +......+..+++.|||.++++..
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 356777742110 136677766667778887776432111 111 112234688999999998776653
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.06 E-value=1.5 Score=37.93 Aligned_cols=210 Identities=9% Similarity=0.063 Sum_probs=112.1
Q ss_pred CCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc----ccc--CeEEEEec-CCCCCcE
Q psy2762 11 GHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG----HSG--PVWQVAWA-HPQFGTL 82 (318)
Q Consensus 11 gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~----h~~--~V~~v~~~-~~~~~~~ 82 (318)
+..-.-.+++|++ ++.++++.-..++|..||.... .-..+ .+.+ ... .+..+.|. |+.++.+
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~---------~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL 79 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ---------SHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRL 79 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTC---------CEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEE
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCC---------eEEEE-ecCCccccCCCcceeeEEEEeccCCCCcE
Confidence 4455667789976 4555555558999999997521 11112 2322 111 24688882 1123677
Q ss_pred EEEEE-------------CCCeEEEEeCC---CCcEEEEEEecCC-----------CcCeEEEEeeCCCCCcEEEEeecC
Q psy2762 83 LASCS-------------YDRKVIIWRGD---NGNWFKYYEYNNH-----------DSSVNSIAWAPKEFGLILACGSSD 135 (318)
Q Consensus 83 las~s-------------~Dg~v~vWd~~---~~~~~~~~~~~~h-----------~~~v~~v~~~p~~~~~~lasgs~d 135 (318)
++... .+..|..+|+. +++......+... ....+.++..++ +...++++.-
T Consensus 80 ~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~--GnaYVt~s~~ 157 (334)
T 2p9w_A 80 FAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD--GNSYVAFALG 157 (334)
T ss_dssp EEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT--SCEEEEEEES
T ss_pred EEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC--CCEEEeCCCC
Confidence 77543 26789999988 5554333333321 124788888887 6677777777
Q ss_pred -CeEEEEEeecCCCCcceeeec----ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE
Q psy2762 136 -GTISFLTYMSDTNSWESRKIA----AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW 210 (318)
Q Consensus 136 -~~i~i~~~~~~~~~~~~~~~~----~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~ 210 (318)
+.|...+ .+-+......+. ....+.+.++++|+ ++.|+.....+.|..+|+.....
T Consensus 158 ~~~I~rV~--pdG~~~~~~~~~~~~~~~~~G~nGIv~~pd-----------------g~~Liv~~~~g~L~~fD~~~pv~ 218 (334)
T 2p9w_A 158 MPAIARVS--ADGKTVSTFAWESGNGGQRPGYSGITFDPH-----------------SNKLIAFGGPRALTAFDVSKPYA 218 (334)
T ss_dssp SCEEEEEC--TTSCCEEEEEECCCCSSSCCSCSEEEEETT-----------------TTEEEEESSSSSEEEEECSSSSC
T ss_pred CCeEEEEe--CCCCEEeeeeecCCCcccccCcceEEEeCC-----------------CCEEEEEcCCCeEEEEcCCCCcc
Confidence 6654433 222111111111 11223567788886 34555554589999999774211
Q ss_pred EEEEEcc--cC---CCCeeEEEEccCCCCCccE-EEEEeCCCeEEEEEcCC
Q psy2762 211 IEETKLE--NH---SDWVRDVAWAPSWGLSKCM-IASCSQDRKVIIWTSND 255 (318)
Q Consensus 211 ~~~~~~~--~h---~~~V~~v~~sp~~~~~~~~-l~s~s~D~~i~vw~~~~ 255 (318)
. ..... +. -.....+ .|.. .+|+. |++.+..+.+.+.+...
T Consensus 219 ~-~v~~~~~G~~~~~~~~dgi--lp~~-~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 219 W-PEPVKINGDFGTLSGTEKI--VTVP-VGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp C-CEECEESSCCCCCTTEEEE--EEEE-ETTEEEEEEEETTEEEEEECSST
T ss_pred e-eecccccCCcccccCcccc--cccc-cCCEEEEEEcCCCCEEEEECCCC
Confidence 0 11111 21 1112333 2211 12555 66666777777776655
No 300
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.05 E-value=1.4 Score=37.43 Aligned_cols=103 Identities=10% Similarity=0.171 Sum_probs=56.7
Q ss_pred CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC-C-----CeEEEEEcCCCcceeeEEeeecC-Cc
Q psy2762 198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-D-----RKVIIWTSNDYVTWTPFIMNTFD-DV 270 (318)
Q Consensus 198 ~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D-----~~i~vw~~~~~~~~~~~~~~~~~-~~ 270 (318)
+.+.+||..++++.....+......-..+.+ ++.+++.||. + ..+.+||..+. .|... .... ..
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~--~~~p~~r 187 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLSH------MDLVYVIGGKGSDRKCLNKMCVYDPKKF-EWKEL--APMQTAR 187 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCBCTTSCBCCCEEEEETTTT-EEEEC--CCCSSCC
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEEE------CCEEEEEeCCCCCCcccceEEEEeCCCC-eEEEC--CCCCCch
Confidence 4588999988888665444332222222222 2567777776 2 35788887764 34321 1111 11
Q ss_pred EEEEEEcCCCCEEEEEeCCC-----eEEEEEECCCCceEEEeeec
Q psy2762 271 VWNVSWSLTGDILTVSCGDN-----SVSLWKENTDGAWQCITEMG 310 (318)
Q Consensus 271 v~~v~~spdg~~l~s~~~D~-----~v~iW~~~~~~~~~~~~~~~ 310 (318)
....+..-++++++.|+.++ .+.++|..+ .+|..+..+-
T Consensus 188 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~p 231 (315)
T 4asc_A 188 SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD-NKWAPFEAFP 231 (315)
T ss_dssp BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT-TEEEEECCCS
T ss_pred hceEEEEECCEEEEEeccCCCCccceEEEEECCC-CeEEECCCCC
Confidence 11111122677888887654 466676544 5899887654
No 301
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.01 E-value=1.6 Score=37.95 Aligned_cols=196 Identities=10% Similarity=-0.037 Sum_probs=107.5
Q ss_pred eeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762 16 IHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII 94 (318)
Q Consensus 16 v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v 94 (318)
...++|++.+. ++.+-...+.|..++++.. .....+.........+++.. ..+.++++-...+.|.+
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~-----------~~~~~~~~~~~~p~glavd~-~~g~ly~~d~~~~~I~~ 142 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGS-----------NVEEVVSTGLESPGGLAVDW-VHDKLYWTDSGTSRIEV 142 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC-----------SCEEEECSSCSCCCEEEEET-TTTEEEEEETTTTEEEE
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCC-----------CceEEEeCCCCCccEEEEec-CCCeEEEEcCCCCeEEE
Confidence 56788886544 4445456778888887632 11111222223345667643 24566666666788999
Q ss_pred EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-CeEEEEEeecCCCCcceeeec-ccccccceeeeCCCCC
Q psy2762 95 WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-GTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIG 172 (318)
Q Consensus 95 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~ 172 (318)
.++........ +...-...+.+++.|.+ +.++.+-... +.|...+.. +.. ...+. ......+.++++|+.
T Consensus 143 ~~~dG~~~~~l--~~~~l~~P~~iavdp~~-g~ly~td~~~~~~I~r~~~d-G~~---~~~~~~~~~~~PnGla~d~~~- 214 (349)
T 3v64_C 143 ANLDGAHRKVL--LWQSLEKPRAIALHPME-GTIYWTDWGNTPRIEASSMD-GSG---RRIIADTHLFWPNGLTIDYAG- 214 (349)
T ss_dssp EETTSCSCEEE--ECTTCSCEEEEEEETTT-TEEEEEECSSSCEEEEEETT-SCS---CEESCCSSCSCEEEEEEETTT-
T ss_pred EcCCCCceEEE--EeCCCCCcceEEEecCc-CeEEEeccCCCCEEEEEeCC-CCC---cEEEEECCCCCcceEEEeCCC-
Confidence 98875432222 22233457899999864 5566655544 566555431 111 11111 112234567887753
Q ss_pred CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762 173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 252 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~ 252 (318)
+....+-+..+.|..+|++....... +.........|++.. +.++.+-...+.|...+
T Consensus 215 ---------------~~lY~aD~~~~~I~~~~~dG~~~~~~--~~~~~~~P~giav~~-----~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 215 ---------------RRMYWVDAKHHVIERANLDGSHRKAV--ISQGLPHPFAITVFE-----DSLYWTDWHTKSINSAN 272 (349)
T ss_dssp ---------------TEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEET-----TEEEEEETTTTEEEEEE
T ss_pred ---------------CEEEEEECCCCEEEEEeCCCCceEEE--EeCCCCCceEEEEEC-----CEEEEecCCCCeEEEEE
Confidence 23445556667899998876432111 222233456777732 55666666677777777
Q ss_pred c
Q psy2762 253 S 253 (318)
Q Consensus 253 ~ 253 (318)
.
T Consensus 273 ~ 273 (349)
T 3v64_C 273 K 273 (349)
T ss_dssp T
T ss_pred c
Confidence 3
No 302
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.82 E-value=1.8 Score=37.46 Aligned_cols=52 Identities=13% Similarity=0.201 Sum_probs=29.3
Q ss_pred CcEEEEEEC-C---------CeEEEEeCCCCcEEEEEEec-CCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762 80 GTLLASCSY-D---------RKVIIWRGDNGNWFKYYEYN-NHDSSVNSIAWAPKEFGLILACGSSD 135 (318)
Q Consensus 80 ~~~las~s~-D---------g~v~vWd~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~lasgs~d 135 (318)
+.+++.||. + ..+.++|+.+..+.....+. .....-.++. .+ +.+++.|+.+
T Consensus 66 ~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~--~~iyv~GG~~ 128 (357)
T 2uvk_A 66 GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HN--GKAYVTGGVN 128 (357)
T ss_dssp TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ET--TEEEEEECCC
T ss_pred CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--EC--CEEEEEeCcC
Confidence 567777776 2 46888898887775543332 1111122222 33 5677888765
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.68 E-value=2.1 Score=37.58 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=104.5
Q ss_pred eeeeeeecCCCCEEEEee------------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-----cccCeEEEEecCC
Q psy2762 15 MIHDAEMDYLGLYLATCS------------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-----HSGPVWQVAWAHP 77 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s------------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----h~~~V~~v~~~~~ 77 (318)
.-.++.+.|+|..+++++ .+|.|.++|.+... .+...+ .+.+ .......+.+..+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~-------~~~~~l-~~~g~~~~~~~f~PhGi~~~~d 122 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE-------PAVSEL-EIIGNTLDISSFNPHGISTFID 122 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSS-------CCEEEC-EEECSSCCGGGCCEEEEEEEEC
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCC-------CceEEE-EccCCCCCcCceeeeeeEEEEC
Confidence 456677888887777763 68999999986220 011111 2222 2234555665332
Q ss_pred CCCc--EEEEEEC--CCeEEEEeCCCC--cEEEEEEecCC-CcCeEEEEeeCCCCCcEEEEeec---C------------
Q psy2762 78 QFGT--LLASCSY--DRKVIIWRGDNG--NWFKYYEYNNH-DSSVNSIAWAPKEFGLILACGSS---D------------ 135 (318)
Q Consensus 78 ~~~~--~las~s~--Dg~v~vWd~~~~--~~~~~~~~~~h-~~~v~~v~~~p~~~~~~lasgs~---d------------ 135 (318)
.++. +++.-.. +.+|.+|++... .......+.+. -...+.+++.++ +.+.++... |
T Consensus 123 ~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~--G~fyvt~~~~ftd~~~~~~e~~~~~ 200 (355)
T 3sre_A 123 DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGP--EHFYATNDHYFIDPYLKSWEMHLGL 200 (355)
T ss_dssp TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEET--TEEEEEESCSCSSHHHHHHHHHTTC
T ss_pred CCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCC--CCEEecCCcEeCCcccccchhhccC
Confidence 2332 3333222 568888876543 33333344432 235789999987 555555431 1
Q ss_pred CeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEE
Q psy2762 136 GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEET 214 (318)
Q Consensus 136 ~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~ 214 (318)
..=.+|.+..+ +...+...-...+.++|+|+. ....++-+..+.|+.|+++. +......
T Consensus 201 ~~g~vyr~d~~----~~~~~~~~l~~pNGia~spDg----------------~~lYvadt~~~~I~~~~~~~~g~l~~~~ 260 (355)
T 3sre_A 201 AWSFVTYYSPN----DVRVVAEGFDFANGINISPDG----------------KYVYIAELLAHKIHVYEKHANWTLTPLR 260 (355)
T ss_dssp CCEEEEEECTT----CCEEEEEEESSEEEEEECTTS----------------SEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred CccEEEEEECC----eEEEeecCCcccCcceECCCC----------------CEEEEEeCCCCeEEEEEECCCCcEecCE
Confidence 12234444322 122222222345788999973 12345556678899998763 3332222
Q ss_pred EcccCCCCeeEEEEccCCCCCccEEEEEeCC-CeEEEEEc
Q psy2762 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQD-RKVIIWTS 253 (318)
Q Consensus 215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-~~i~vw~~ 253 (318)
.+ ......-.++..++ +|.+.+++..+ +.|..|+.
T Consensus 261 ~~-~~~g~PDGi~vD~e---~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 261 VL-SFDTLVDNISVDPV---TGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EE-ECSSEEEEEEECTT---TCCEEEEEESCHHHHHSCCT
T ss_pred EE-eCCCCCceEEEeCC---CCcEEEEecCCceEEEEECC
Confidence 22 12233456677662 15666655544 23333443
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.55 E-value=1.9 Score=37.66 Aligned_cols=120 Identities=8% Similarity=0.082 Sum_probs=66.9
Q ss_pred cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc---cCCCCeeEEEEccCCCCCccE
Q psy2762 162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE---NHSDWVRDVAWAPSWGLSKCM 238 (318)
Q Consensus 162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~---~h~~~V~~v~~sp~~~~~~~~ 238 (318)
...++|.|+ +. |..+..++.|++++ .++......+. .-......|+|+|++..++.+
T Consensus 33 P~~ia~~pd-----------------G~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~l 92 (352)
T 2ism_A 33 PWALAFLPD-----------------GG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYV 92 (352)
T ss_dssp EEEEEECTT-----------------SC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEE
T ss_pred ceEEEEcCC-----------------Ce-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEE
Confidence 357788886 34 44445568899888 34332222221 123457899999976544555
Q ss_pred EEEEeCC-----CeEEEEEcCCCcceeeE-EeeecC------CcEEEEEEcCCCCEEEEEeCCCe-----------EEEE
Q psy2762 239 IASCSQD-----RKVIIWTSNDYVTWTPF-IMNTFD------DVVWNVSWSLTGDILTVSCGDNS-----------VSLW 295 (318)
Q Consensus 239 l~s~s~D-----~~i~vw~~~~~~~~~~~-~~~~~~------~~v~~v~~spdg~~l~s~~~D~~-----------v~iW 295 (318)
.++-... ..|..++.......... .+.... .....++|.|||.+.++.+..+. =+|+
T Consensus 93 Yv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ 172 (352)
T 2ism_A 93 YAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKIL 172 (352)
T ss_dssp EEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEE
T ss_pred EEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEE
Confidence 5555543 56777776642100111 111111 13468999999987776543211 2677
Q ss_pred EECCCC
Q psy2762 296 KENTDG 301 (318)
Q Consensus 296 ~~~~~~ 301 (318)
.++.+|
T Consensus 173 ri~~dG 178 (352)
T 2ism_A 173 RLTPEG 178 (352)
T ss_dssp EECTTS
T ss_pred EEcCCC
Confidence 776655
No 305
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.36 E-value=3.4 Score=38.78 Aligned_cols=24 Identities=13% Similarity=0.068 Sum_probs=20.0
Q ss_pred cEEEEEECCCeEEEEeCCCCcEEE
Q psy2762 81 TLLASCSYDRKVIIWRGDNGNWFK 104 (318)
Q Consensus 81 ~~las~s~Dg~v~vWd~~~~~~~~ 104 (318)
..++.++.+|.+.++|..+++.+-
T Consensus 337 ~~v~~~~~~G~l~~lD~~tG~~lw 360 (582)
T 1flg_A 337 KATAHADRNGFFYVVDRSNGKLQN 360 (582)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEE
T ss_pred EEEEEECCCceEEEEECCCCCEec
Confidence 378889999999999999887543
No 306
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.35 E-value=2.3 Score=38.62 Aligned_cols=101 Identities=11% Similarity=0.053 Sum_probs=54.7
Q ss_pred cceEEEecCCCeEEEEEccCCeEEEEEEccc------CCCCeeEEEEccCCCCCccEEEEEeC------------CCeEE
Q psy2762 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLEN------HSDWVRDVAWAPSWGLSKCMIASCSQ------------DRKVI 249 (318)
Q Consensus 188 ~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~------h~~~V~~v~~sp~~~~~~~~l~s~s~------------D~~i~ 249 (318)
+..+++-...+.|++++..++.......+.. .......|+|+|++..++.+.++-+. ...|.
T Consensus 38 G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~ 117 (454)
T 1cru_A 38 NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIR 117 (454)
T ss_dssp SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEE
Confidence 4555554444468888765444333333321 12446799999987655666666543 12444
Q ss_pred EEEcCCCc-ce-eeE-Eee----ecCCcEEEEEEcCCCCEEEEEeC
Q psy2762 250 IWTSNDYV-TW-TPF-IMN----TFDDVVWNVSWSLTGDILTVSCG 288 (318)
Q Consensus 250 vw~~~~~~-~~-~~~-~~~----~~~~~v~~v~~spdg~~l~s~~~ 288 (318)
-++..... .. ... .+. ........++|.|||++.++.+.
T Consensus 118 r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 118 RYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred EEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 45443211 00 011 111 11235789999999998887664
No 307
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.35 E-value=4.2 Score=39.76 Aligned_cols=182 Identities=9% Similarity=-0.077 Sum_probs=97.9
Q ss_pred CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccceeee
Q psy2762 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSW 167 (318)
Q Consensus 89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~ 167 (318)
...|+..++.......+. .....+..|+|.+.+ +.++.+-...+.|..+++...........+ .........+++
T Consensus 403 ~~~Ir~i~l~~~~~~~l~---~~~~~~~gl~~d~~~-~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp BSSEEEECTTSCCCEEEE---CSCSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred ccceeEeeccCCcceeee---cCCCceEEEeecccC-CeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 456777777655433322 223557789999854 556666666677776665321100011111 111223344555
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC-CC
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-DR 246 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D~ 246 (318)
.+.. ++.+++-...+.|.+.++++.....+ +.......+.|++.|. .+.++.+-.. ..
T Consensus 479 D~~~----------------~~LY~tD~~~~~I~v~~ldG~~~~~l--~~~~l~~P~gIaVDp~---~g~LYwtD~g~~~ 537 (791)
T 3m0c_C 479 DWIH----------------SNIYWTDSVLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPV---HGFMYWTDWGTPA 537 (791)
T ss_dssp ETTT----------------TEEEEEETTTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETT---TTEEEEEECSSSC
T ss_pred eecC----------------CcEEEEecCCCeEEEEeCCCCeEEEE--EeCCCCCcceEEEecC---CCCEEEecCCCCC
Confidence 4421 24556667778899999876543222 2223344789999986 3444444322 36
Q ss_pred eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEE
Q psy2762 247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKE 297 (318)
Q Consensus 247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~ 297 (318)
.|.+.++.+... .............|+++|.+..|..+- ..+.|+..++
T Consensus 538 ~I~~~~~dG~~~--~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 538 KIKKGGLNGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp EEEEEETTSCCE--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eEEEEecCCCce--EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 788887765431 112222235688999998776666553 3445555553
No 308
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.27 E-value=2.2 Score=36.22 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=28.0
Q ss_pred CcEEEEEECC-------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762 80 GTLLASCSYD-------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS 134 (318)
Q Consensus 80 ~~~las~s~D-------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~ 134 (318)
+.+++.|+.+ ..+.++|+.+..+.....++.....-..+. .+ +.+++.|+.
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~--~~iyv~GG~ 167 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HN--GMIYCLGGK 167 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ET--TEEEEECCE
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--EC--CEEEEEcCC
Confidence 6777777764 357788888877765433322111111222 23 566777764
No 309
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.15 E-value=2.3 Score=36.06 Aligned_cols=109 Identities=11% Similarity=0.208 Sum_probs=57.1
Q ss_pred ceEEEecC------CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCc
Q psy2762 189 KRLVSGGC------DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYV 257 (318)
Q Consensus 189 ~~lasgs~------d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~ 257 (318)
+.++.|+. -+.+.+||..++++.....+......-..+.+ ++.+++.||.+ ..+.+||..+..
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH------KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE------TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE------CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 44555653 23588999999888665443322222222222 25677777754 346678876643
Q ss_pred ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC--------------CeEEEEEECCCCceEEE
Q psy2762 258 TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD--------------NSVSLWKENTDGAWQCI 306 (318)
Q Consensus 258 ~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D--------------~~v~iW~~~~~~~~~~~ 306 (318)
|...........-.++. ..++++++.||.+ ..+.++|..+ .+|..+
T Consensus 234 -W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~ 293 (318)
T 2woz_A 234 -WEVMTEFPQERSSISLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK-KEWAGM 293 (318)
T ss_dssp -EEECCCCSSCCBSCEEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT-TEEEEE
T ss_pred -EEECCCCCCcccceEEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC-CEehhh
Confidence 43211111111111222 2267777777654 3466666444 589887
No 310
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.98 E-value=3.7 Score=37.72 Aligned_cols=214 Identities=11% Similarity=0.051 Sum_probs=111.6
Q ss_pred eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC-CCcCeEEEEe-------eCCCCCcEEEEeecCC----
Q psy2762 69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN-HDSSVNSIAW-------APKEFGLILACGSSDG---- 136 (318)
Q Consensus 69 V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~-h~~~v~~v~~-------~p~~~~~~lasgs~d~---- 136 (318)
-..++|.+...+.++++-...+.|++.|+..+....+..... .......|+| +++. ..++++-..++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G-~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA-EYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT-CEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC-CEEEEEeCCCCCccc
Confidence 456787631234455554444678888888765433332211 1224789999 8873 23555544432
Q ss_pred --eEEEEEeecCCCCcce----eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc----
Q psy2762 137 --TISFLTYMSDTNSWES----RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE---- 206 (318)
Q Consensus 137 --~i~i~~~~~~~~~~~~----~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~---- 206 (318)
.|.+.+... ...+.. ..+.. -..+..++.+|+. +..+++-..++.|..+|++
T Consensus 220 ~~~V~~i~r~~-~G~~~~~~~~~~v~~-~~~p~giavdp~~----------------g~LYvtd~~~g~V~r~d~~~~~~ 281 (496)
T 3kya_A 220 SPSVYIIKRNA-DGTFDDRSDIQLIAA-YKQCNGATIHPIN----------------GELYFNSYEKGQVFRLDLVDYFK 281 (496)
T ss_dssp EEEEEEEECCT-TSCCSTTSCEEEEEE-ESCCCCEEECTTT----------------CCEEEEETTTTEEEEECHHHHHH
T ss_pred CceEEEEecCC-CCceeecccceeecc-CCCceEEEEcCCC----------------CeEEEEECCCCEEEEEecccccc
Confidence 244443211 111210 11211 1234566667742 3456677788889999987
Q ss_pred ---CCeE------------EEEEEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCccee--eEEeeec-
Q psy2762 207 ---GDKW------------IEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVTWT--PFIMNTF- 267 (318)
Q Consensus 207 ---~~~~------------~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~~~--~~~~~~~- 267 (318)
++.. .+.... +...+-+.|+|+|+ +. +.++=.....|+.++........ +....+.
T Consensus 282 ~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~----G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~ 356 (496)
T 3kya_A 282 TIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPT----GKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY 356 (496)
T ss_dssp HHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTT----SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT
T ss_pred cccCceeecccccccccccceeEec-CCCCCceEEEEcCC----CCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC
Confidence 4432 122222 23345689999997 55 45555567788886654321100 0111110
Q ss_pred -----C---------CcEE-EEEEc-------CCCCEEEEEeCCCeEEEEEECCCCceEEEee
Q psy2762 268 -----D---------DVVW-NVSWS-------LTGDILTVSCGDNSVSLWKENTDGAWQCITE 308 (318)
Q Consensus 268 -----~---------~~v~-~v~~s-------pdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~ 308 (318)
. .... .+... ++|.++++=.....||.++ ..|...+++-
T Consensus 357 g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~--~~G~v~TiaG 417 (496)
T 3kya_A 357 KQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT--PEGIVSTYAG 417 (496)
T ss_dssp TBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC--TTCBEEEEEE
T ss_pred CCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe--CCCCEEEEec
Confidence 0 1233 45554 4666666555667777775 6677766653
No 311
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.92 E-value=4.7 Score=38.72 Aligned_cols=200 Identities=13% Similarity=0.100 Sum_probs=99.8
Q ss_pred CcEEEEEECC----CeEEEEeCCCCcEEEEE-E-----ecCCCcCeEEEEeeCCCCCcEEEEeecCC------eEEEEEe
Q psy2762 80 GTLLASCSYD----RKVIIWRGDNGNWFKYY-E-----YNNHDSSVNSIAWAPKEFGLILACGSSDG------TISFLTY 143 (318)
Q Consensus 80 ~~~las~s~D----g~v~vWd~~~~~~~~~~-~-----~~~h~~~v~~v~~~p~~~~~~lasgs~d~------~i~i~~~ 143 (318)
+.+++.||.+ ..+.++|+.+..+.... . +......-..+.+..+ +.+++.|+.++ .+.+||+
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~--~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRN--NQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTT--TEEEEECCBSSTTCBCCCCEEEET
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccC--CEEEEEcCCCCCCCccccEEEEeC
Confidence 5677777754 45778898887776554 2 1111111222333213 56777877543 2334443
Q ss_pred ecCCCCcceeeeccc-ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC--eEEEEEccCCeEEEEEE---cc
Q psy2762 144 MSDTNSWESRKIAAH-TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN--LIKIWKQEGDKWIEETK---LE 217 (318)
Q Consensus 144 ~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~--~i~iwd~~~~~~~~~~~---~~ 217 (318)
..+.|....-... ......+.+. + ++.++.||.++ .+.+||..++.|..... +.
T Consensus 476 --~t~~W~~~~~~p~~R~~h~~~~~~-~-----------------~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p 535 (695)
T 2zwa_A 476 --KTREWSMIKSLSHTRFRHSACSLP-D-----------------GNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFF 535 (695)
T ss_dssp --TTTEEEECCCCSBCCBSCEEEECT-T-----------------SCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGG
T ss_pred --CCCcEEECCCCCCCcccceEEEEc-C-----------------CEEEEECCCCCCCCEEEEECCCCceEEccCCCCCC
Confidence 3333432110000 0000111111 1 34567777655 68999999988865443 22
Q ss_pred cCCCCeeEEEEccCCCCCccEEEEEeC--C-----CeEEEEEcCCCcc-----eeeEEeeecCC-cEEEEEEcCCCCEEE
Q psy2762 218 NHSDWVRDVAWAPSWGLSKCMIASCSQ--D-----RKVIIWTSNDYVT-----WTPFIMNTFDD-VVWNVSWSLTGDILT 284 (318)
Q Consensus 218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~--D-----~~i~vw~~~~~~~-----~~~~~~~~~~~-~v~~v~~spdg~~l~ 284 (318)
.....-..+.+... .+.+++.||. + ..+.+||+....- |.......... .-.++....++++++
T Consensus 536 ~~r~~~~a~v~~~~---~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv 612 (695)
T 2zwa_A 536 QNSLVSAGLEFDPV---SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLI 612 (695)
T ss_dssp GSCCBSCEEEEETT---TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEE
T ss_pred CcccceeEEEEeCC---CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEE
Confidence 22222223455442 2567777776 2 3588889876541 43221111111 111233333477777
Q ss_pred EEeCC--------CeEEEEEECCCCceEE
Q psy2762 285 VSCGD--------NSVSLWKENTDGAWQC 305 (318)
Q Consensus 285 s~~~D--------~~v~iW~~~~~~~~~~ 305 (318)
.||.+ ..+.++|..+ ..|..
T Consensus 613 ~GG~~~~~~~~~~~~v~~yd~~t-~~W~~ 640 (695)
T 2zwa_A 613 VGGTSPSGLFDRTNSIISLDPLS-ETLTS 640 (695)
T ss_dssp ECCBCSSCCCCTTTSEEEEETTT-TEEEE
T ss_pred ECCccCCCCCCCCCeEEEEECCC-CeEEE
Confidence 77743 4588888655 57874
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.84 E-value=3.1 Score=36.40 Aligned_cols=176 Identities=14% Similarity=0.140 Sum_probs=89.4
Q ss_pred CCCeEEEEeCCC--CcEEEEEEecC-----CCcCeEEEEeeCC--CCCcEEEEeec--CCeEEEEEeecCCCCcc-eeee
Q psy2762 88 YDRKVIIWRGDN--GNWFKYYEYNN-----HDSSVNSIAWAPK--EFGLILACGSS--DGTISFLTYMSDTNSWE-SRKI 155 (318)
Q Consensus 88 ~Dg~v~vWd~~~--~~~~~~~~~~~-----h~~~v~~v~~~p~--~~~~~lasgs~--d~~i~i~~~~~~~~~~~-~~~~ 155 (318)
.+|.|-++|+.+ .+. ....+.+ .....-.+++.++ +...++++-.. +.+|.+|++..+..... ...+
T Consensus 81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 689999999873 222 2223333 1235667777663 22245565444 56888888865432111 1111
Q ss_pred cccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEec-----------------CCCeEEEEEccCCeEEEEEEcc
Q psy2762 156 AAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-----------------CDNLIKIWKQEGDKWIEETKLE 217 (318)
Q Consensus 156 ~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-----------------~d~~i~iwd~~~~~~~~~~~~~ 217 (318)
.+.. ...+.+...++ +...++.. ..+.|.-++. ++... ...
T Consensus 160 ~g~~~~~pND~~v~~~-----------------G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~--~~~ 218 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGP-----------------EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRV--VAE 218 (355)
T ss_dssp CCTTCSSEEEEEEEET-----------------TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEE--EEE
T ss_pred ccCCCCCCceEEEeCC-----------------CCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEE--eec
Confidence 1111 12345555543 12222221 1233444443 32211 111
Q ss_pred cCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEeCC
Q psy2762 218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGD 289 (318)
Q Consensus 218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D 289 (318)
+ -..-+.|+|||+ ...+.++-+..+.|..|++..................-.++..+ +|++.+++..+
T Consensus 219 ~-l~~pNGia~spD---g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 219 G-FDFANGINISPD---GKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp E-ESSEEEEEECTT---SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred C-CcccCcceECCC---CCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 2 233689999997 23445555567899999986432111111113345677889999 59887766533
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.76 E-value=3.7 Score=36.93 Aligned_cols=71 Identities=13% Similarity=0.175 Sum_probs=48.1
Q ss_pred CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee------e---cCCcEEEEEEcCCCCEEEEEe--C
Q psy2762 220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN------T---FDDVVWNVSWSLTGDILTVSC--G 288 (318)
Q Consensus 220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~------~---~~~~v~~v~~spdg~~l~s~~--~ 288 (318)
...|..+.|+|-+. .+..|++--.|++||+||+...... |..+. + ....|.+++|..+|-.|.... +
T Consensus 124 ~s~I~qVlWHPl~~-~ds~LVVLtsD~~Ir~yDl~~s~~~-P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~ 201 (452)
T 3pbp_A 124 KSSIKKVLFHPKSY-RDSCIVVLKEDDTITMFDILNSQEK-PIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTE 201 (452)
T ss_dssp CCCEEEEEECTTBG-GGCEEEEEETTSCEEEEETTCTTSC-CEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTT
T ss_pred CCceeEEEeccccC-CCCeEEEEecCCEEEEEEcccCCCC-CcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCC
Confidence 56799999999643 3667888999999999999873321 22221 1 114578889998776555544 5
Q ss_pred CCeE
Q psy2762 289 DNSV 292 (318)
Q Consensus 289 D~~v 292 (318)
.|.|
T Consensus 202 ~GDI 205 (452)
T 3pbp_A 202 GGDI 205 (452)
T ss_dssp SCEE
T ss_pred CCCE
Confidence 5543
No 314
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.72 E-value=1.7 Score=37.97 Aligned_cols=110 Identities=7% Similarity=0.027 Sum_probs=60.5
Q ss_pred EEEecCCCeEEEEEccCCeEEEEEEcc---cCCCCeeEEEEccCCCCCccEEEEEeC---C----CeEEEEEcCCCc-ce
Q psy2762 191 LVSGGCDNLIKIWKQEGDKWIEETKLE---NHSDWVRDVAWAPSWGLSKCMIASCSQ---D----RKVIIWTSNDYV-TW 259 (318)
Q Consensus 191 lasgs~d~~i~iwd~~~~~~~~~~~~~---~h~~~V~~v~~sp~~~~~~~~l~s~s~---D----~~i~vw~~~~~~-~~ 259 (318)
|..+..++.|++++. .++ .....+. .-......|+|+|++..++.+.++-+. + ..|..|+..... ..
T Consensus 42 l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~ 119 (354)
T 3a9g_A 42 YLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKL 119 (354)
T ss_dssp EEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCE
T ss_pred EEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCc
Confidence 444555689998874 333 2222221 122347899999976555666665543 3 567777765431 00
Q ss_pred -eeEE----eee-cCCcEEEEEEcCCCCEEEEEeCCCe-----------EEEEEECCCCc
Q psy2762 260 -TPFI----MNT-FDDVVWNVSWSLTGDILTVSCGDNS-----------VSLWKENTDGA 302 (318)
Q Consensus 260 -~~~~----~~~-~~~~v~~v~~spdg~~l~s~~~D~~-----------v~iW~~~~~~~ 302 (318)
.... +.. .......++|.|||.++++.+..+. =+|+.++.+|.
T Consensus 120 ~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~ 179 (354)
T 3a9g_A 120 KEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR 179 (354)
T ss_dssp EEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred CccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC
Confidence 0111 111 1113467999999988777553221 15777766554
No 315
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.50 E-value=4.5 Score=37.15 Aligned_cols=247 Identities=10% Similarity=0.008 Sum_probs=127.9
Q ss_pred eeeeeeecCC--CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc---cccCeEEEEe-------cCCCCCcE
Q psy2762 15 MIHDAEMDYL--GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG---HSGPVWQVAW-------AHPQFGTL 82 (318)
Q Consensus 15 ~v~~~~~~~~--g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~---h~~~V~~v~~-------~~~~~~~~ 82 (318)
....++|+|. ++++++-...+.|++.|++. +.+...+.. .......++| +. ++.+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~-----------~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~--~G~~ 206 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKN-----------RMLSSPLNINTIPTNRIRSIAFNKKIEGYAD--EAEY 206 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTT-----------TEEEEEECCTTSSCSBEEEEEECCCBTTTBC--TTCE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCC-----------CEEEEEEccCccccCCCcEEEEeecccccCC--CCCE
Confidence 3557889983 44454444446788888752 233222222 1224788998 74 4776
Q ss_pred EEEEECCC-------eEEEEeCCC-CcEE------EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEee----
Q psy2762 83 LASCSYDR-------KVIIWRGDN-GNWF------KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM---- 144 (318)
Q Consensus 83 las~s~Dg-------~v~vWd~~~-~~~~------~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~---- 144 (318)
|+.+...+ .|.+.+... +.+. ....+ .....++++|++ +.++++-..++.|..+++.
T Consensus 207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~----~~p~giavdp~~-g~LYvtd~~~g~V~r~d~~~~~~ 281 (496)
T 3kya_A 207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY----KQCNGATIHPIN-GELYFNSYEKGQVFRLDLVDYFK 281 (496)
T ss_dssp EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE----SCCCCEEECTTT-CCEEEEETTTTEEEEECHHHHHH
T ss_pred EEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC----CCceEEEEcCCC-CeEEEEECCCCEEEEEecccccc
Confidence 66666554 255554333 1221 11122 124577889964 5677777778888888774
Q ss_pred ---cCCC-----Ccc---eeeec--ccccccceeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC--C
Q psy2762 145 ---SDTN-----SWE---SRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG--D 208 (318)
Q Consensus 145 ---~~~~-----~~~---~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~--~ 208 (318)
.+.. .+. ...+. +.......++|+|+ +. .+++-+....|+.++... +
T Consensus 282 ~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~-----------------G~~lYvaD~~~h~I~kid~dg~~~ 344 (496)
T 3kya_A 282 TIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPT-----------------GKYAYFGVINNHYFMRSDYDEIKK 344 (496)
T ss_dssp HHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTT-----------------SSEEEEEETTTTEEEEEEEETTTT
T ss_pred cccCceeecccccccccccceeEecCCCCCceEEEEcCC-----------------CCEEEEEeCCCCEEEEEecCCCcc
Confidence 2221 000 11111 11122356888886 34 344456667888866543 2
Q ss_pred eE---EEEEEc---ccCC---------CCee-EEEEc-cCC--CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee---
Q psy2762 209 KW---IEETKL---ENHS---------DWVR-DVAWA-PSW--GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT--- 266 (318)
Q Consensus 209 ~~---~~~~~~---~~h~---------~~V~-~v~~s-p~~--~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~--- 266 (318)
.+ ...... .+.. .... .+... |++ ...+.++++=.....||.++..... ..+.+
T Consensus 345 ~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v----~TiaG~g~ 420 (496)
T 3kya_A 345 EFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIV----STYAGRGA 420 (496)
T ss_dssp EECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCBE----EEEEESCT
T ss_pred eecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCCE----EEEecccc
Confidence 21 111111 1111 1123 33443 100 0025566665667788888754321 11111
Q ss_pred -----------c----------CCcEEEEEEcCC-CCEEEEEeCCCeEEEEEECCC
Q psy2762 267 -----------F----------DDVVWNVSWSLT-GDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 267 -----------~----------~~~v~~v~~spd-g~~l~s~~~D~~v~iW~~~~~ 300 (318)
+ -.....|+++++ |.++++=.....||.++.+..
T Consensus 421 ~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 421 STSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp THHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred cccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 0 124679999997 776665566778888887664
No 316
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.44 E-value=1.2 Score=38.98 Aligned_cols=124 Identities=10% Similarity=0.078 Sum_probs=68.0
Q ss_pred cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc----cCCCCeeEEEEccCCCCCcc
Q psy2762 162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE----NHSDWVRDVAWAPSWGLSKC 237 (318)
Q Consensus 162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~----~h~~~V~~v~~sp~~~~~~~ 237 (318)
...++|.|+ +..+++--..|.|++++..++.......+. ........|+|+|++..++.
T Consensus 34 P~~ia~~pd-----------------G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~ 96 (347)
T 3das_A 34 PWGLAPLPG-----------------GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHM 96 (347)
T ss_dssp EEEEEECTT-----------------SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCE
T ss_pred ceEEEEcCC-----------------CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCE
Confidence 356788886 455666555899999876555432222221 22345789999996533354
Q ss_pred EEEEEe--CCCeEEEEEcCCC-----c-ceeeEEeee----cCCcEEEEEEcCCCCEEEEEeCCC-----------eEEE
Q psy2762 238 MIASCS--QDRKVIIWTSNDY-----V-TWTPFIMNT----FDDVVWNVSWSLTGDILTVSCGDN-----------SVSL 294 (318)
Q Consensus 238 ~l~s~s--~D~~i~vw~~~~~-----~-~~~~~~~~~----~~~~v~~v~~spdg~~l~s~~~D~-----------~v~i 294 (318)
+.++-+ .+..|.-|..... . ......+.. ....-..+.|.|||.+.++.++.+ .=+|
T Consensus 97 lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~I 176 (347)
T 3das_A 97 VYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKI 176 (347)
T ss_dssp EEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCE
T ss_pred EEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEE
Confidence 444432 3445555555441 1 000111111 112345799999999888765311 2356
Q ss_pred EEECCCCc
Q psy2762 295 WKENTDGA 302 (318)
Q Consensus 295 W~~~~~~~ 302 (318)
|.++.+|.
T Consensus 177 lRi~~dG~ 184 (347)
T 3das_A 177 LRMTPDGE 184 (347)
T ss_dssp EEECTTSS
T ss_pred EEEeCCCC
Confidence 77666554
No 317
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.13 E-value=4.1 Score=35.58 Aligned_cols=199 Identities=12% Similarity=0.180 Sum_probs=109.8
Q ss_pred EEecCCCC--CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCC--C----cEEEEeec--CCeEEEE
Q psy2762 72 VAWAHPQF--GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF--G----LILACGSS--DGTISFL 141 (318)
Q Consensus 72 v~~~~~~~--~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~----~~lasgs~--d~~i~i~ 141 (318)
..|.+|.+ ..+++...-++-+.++|+ .++.++ .+. .+.++.|..-|.-. + ..+++.-. +++|.++
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~--~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf 104 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLH--SYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY 104 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEE--EEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEE--Ecc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEE
Confidence 34554432 345555566788999999 455333 233 25677777776300 0 22333333 5789999
Q ss_pred EeecCCCCcceeeeccc--c-----cccceeee--CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC---C-
Q psy2762 142 TYMSDTNSWESRKIAAH--T-----IGCNAVSW--GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG---D- 208 (318)
Q Consensus 142 ~~~~~~~~~~~~~~~~h--~-----~~v~~~~~--~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~---~- 208 (318)
++...... +..+..- . ..+..+++ +|..+ ..|+.....++.+..|++.. +
T Consensus 105 ~iDp~~~~--l~~i~~~~~pv~t~~~~pyGlcly~~~~~g---------------~~yafV~~k~G~~~q~~l~~~~~g~ 167 (355)
T 3amr_A 105 AIDGKNGT--LQSMTDPDHPIATAINEVYGFTLYHSQKTG---------------KYYAMVTGKEGEFEQYELKADKNGY 167 (355)
T ss_dssp EECTTTCC--EEECSCTTSCEECCCSSCCCEEEEECTTTC---------------CEEEEEECSSSEEEEEEEEECTTSC
T ss_pred EECCCCCc--eeeccccccCcCCCCCCeeEEEEEecCCCC---------------cEEEEEECCCCeEEEEEEEeCCCCc
Confidence 87433322 2222110 0 12233333 33210 13677778889999998732 2
Q ss_pred ---eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc--ceeeEEe---eecCCcEEEEEE--cC
Q psy2762 209 ---KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV--TWTPFIM---NTFDDVVWNVSW--SL 278 (318)
Q Consensus 209 ---~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~--~~~~~~~---~~~~~~v~~v~~--sp 278 (318)
+.+....+ ...+..+...+. ...|..+-+|.-|..++.+... ....... ....+.+..++. .+
T Consensus 168 ~~~~lVR~f~l---gsq~EgcvvDd~----~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~ 240 (355)
T 3amr_A 168 ISGKKVRAFKM---NSQTEGMAADDE----YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAA 240 (355)
T ss_dssp EEEEEEEEEEC---SSCEEEEEEETT----TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECG
T ss_pred ccceEEEEecC---CCCcceEEEcCC----CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecC
Confidence 22333333 234677788875 5578888888777667654322 1111111 122346777877 56
Q ss_pred CCC-EEEEEe-CCCeEEEEEECC
Q psy2762 279 TGD-ILTVSC-GDNSVSLWKENT 299 (318)
Q Consensus 279 dg~-~l~s~~-~D~~v~iW~~~~ 299 (318)
+|+ +|+.++ .+++.-+|+...
T Consensus 241 ~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 241 DGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp GGCEEEEEEEGGGTEEEEEESST
T ss_pred CCCEEEEEEcCCCCEEEEEECCC
Confidence 666 666666 577999999753
No 318
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.13 E-value=4.4 Score=35.93 Aligned_cols=206 Identities=8% Similarity=-0.071 Sum_probs=108.3
Q ss_pred ceeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762 14 DMIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV 92 (318)
Q Consensus 14 ~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v 92 (318)
..+..++|++.+. +..+-...+.|..++++... ........+.........+++.. ..+.++++-...+.|
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~-------~~~~~~~~~~~~~~~p~glavD~-~~~~lY~~d~~~~~I 183 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH-------GVSSYDTVISRDIQAPDGLAVDW-IHSNIYWTDSVLGTV 183 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-------------CCCEEEECSSCSCEEEEEEET-TTTEEEEEETTTTEE
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCC-------CCCcceEEEeCCCCCcccEEEEe-cCCceEEEECCCCeE
Confidence 4567788887544 44444456778888775210 00011122222334566777753 235666666667899
Q ss_pred EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-CCeEEEEEeecCCCCcceeee-cccccccceeeeCCC
Q psy2762 93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-DGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPG 170 (318)
Q Consensus 93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~ 170 (318)
.+.++.......+. ...-.....|++.|.. +.++.+-.. .+.|...+.. +.. ...+ .......+.++++|.
T Consensus 184 ~~~~~~g~~~~~l~--~~~~~~P~~iavdp~~-g~ly~td~~~~~~I~~~~~d-G~~---~~~~~~~~l~~P~glavd~~ 256 (400)
T 3p5b_L 184 SVADTKGVKRKTLF--RENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLN-GVD---IYSLVTENIQWPNGITLDLL 256 (400)
T ss_dssp EEECTTTCSEEEEE--ECSSCCEEEEEEETTT-TEEEEEECSSSCCEEEEETT-SCS---CEEEECSSCSCEEEEEEETT
T ss_pred EEEeCCCCceEEEE--eCCCCCcceEEEeccc-CeEEEEeCCCCCEEEEEeCC-CCc---cEEEEECCCCceEEEEEEeC
Confidence 99988765432222 2223457899999864 455555422 3555554431 111 1111 111123456777764
Q ss_pred CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762 171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v 250 (318)
. +....+=+..+.|..+|++...........+.-.....|+... +.++.+-...+.|..
T Consensus 257 ~----------------~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-----~~lywtd~~~~~V~~ 315 (400)
T 3p5b_L 257 S----------------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-----DKVFWTDIINEAIFS 315 (400)
T ss_dssp T----------------TEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-----TEEEEEESSSCSEEE
T ss_pred C----------------CEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-----CEEEEecCCCCeEEE
Confidence 2 2334444566789999987654322222212223345666632 456666666777888
Q ss_pred EEcCC
Q psy2762 251 WTSND 255 (318)
Q Consensus 251 w~~~~ 255 (318)
++..+
T Consensus 316 ~~~~~ 320 (400)
T 3p5b_L 316 ANRLT 320 (400)
T ss_dssp EESSS
T ss_pred EEcCC
Confidence 87433
No 319
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.97 E-value=4 Score=34.99 Aligned_cols=181 Identities=13% Similarity=0.023 Sum_probs=95.9
Q ss_pred CCeEEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762 89 DRKVIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS 166 (318)
Q Consensus 89 Dg~v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~ 166 (318)
...|+..++.... .... +.+ ...+..++|.+.+ +.++.+-...+.|..+++..... ....+.........++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~--~~~-~~~~~~ld~d~~~-~~lyw~D~~~~~I~r~~~~g~~~--~~~~~~~~l~~p~gla 85 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIV--VGG-LEDAAAVDFVFSH-GLIYWSDVSEEAIKRTEFNKTES--VQNVVVSGLLSPDGLA 85 (318)
T ss_dssp EEEEEEEETTCTTSCCEEE--EEE-EEEEEEEEEEGGG-TEEEEEETTTTEEEEEETTSSSC--CCEEEEECCSCCCEEE
T ss_pred cCeEEEEECCCCceEEEEE--ecC-CCccEEEEEEeCC-CEEEEEECCCCcEEEEEccCCCc--eEEEEcCCCCCccEEE
Confidence 4577778776542 1111 111 1245688999864 55666656667776665422110 0011111112233455
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE-eCC
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC-SQD 245 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~-s~D 245 (318)
+.+.. +..+.+-...+.|.+++++....... +.......+.|++.|. .+.++.+- +..
T Consensus 86 vd~~~----------------g~ly~~d~~~~~I~~~~~dG~~~~~l--~~~~~~~P~giavdp~---~g~ly~td~~~~ 144 (318)
T 3sov_A 86 CDWLG----------------EKLYWTDSETNRIEVSNLDGSLRKVL--FWQELDQPRAIALDPS---SGFMYWTDWGEV 144 (318)
T ss_dssp EETTT----------------TEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEEGG---GTEEEEEECSSS
T ss_pred EEcCC----------------CeEEEEECCCCEEEEEECCCCcEEEE--EeCCCCCccEEEEeCC---CCEEEEEecCCC
Confidence 54421 34455666677899998876432111 2233345689999985 24444443 235
Q ss_pred CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE-eCCCeEEEEEEC
Q psy2762 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CGDNSVSLWKEN 298 (318)
Q Consensus 246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~-~~D~~v~iW~~~ 298 (318)
..|...+...... ......--...+.++|+|++..|.-+ +..+.|..++.+
T Consensus 145 ~~I~r~~~dG~~~--~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 145 PKIERAGMDGSSR--FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp CEEEEEETTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEcCCCCe--EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 6777777654321 11121222456899999976666555 445667666644
No 320
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.94 E-value=6.4 Score=37.32 Aligned_cols=231 Identities=6% Similarity=-0.084 Sum_probs=127.9
Q ss_pred CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCC
Q psy2762 33 SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHD 112 (318)
Q Consensus 33 ~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~ 112 (318)
..+.|+..+++.. ....+..+ ..-..+.+++|.+ .++.++.+-..++.|..+++.......+. ...-
T Consensus 13 ~~~~I~~i~l~~~---------~~~~~~~~-~~~~~~~~l~~d~-~~~~lywtD~~~~~I~r~~~~g~~~~~v~--~~g~ 79 (628)
T 4a0p_A 13 RRADIRRISLETN---------NNNVAIPL-TGVKEASALDFDV-TDNRIYWTDISLKTISRAFMNGSALEHVV--EFGL 79 (628)
T ss_dssp ETTEEEEEESSCT---------TCEEECCC-CSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEE--CSSC
T ss_pred eCCcEEEEECCCC---------CcceEEEc-CCCCceEEEEEEC-CCCEEEEEECCCCeEEEEECCCCCcEEEE--eCCC
Confidence 4678899988632 11111112 2234577899964 35666667667789998888765432222 2112
Q ss_pred cCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEE
Q psy2762 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV 192 (318)
Q Consensus 113 ~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la 192 (318)
.....+++.+.. +.++.+-...+.|.+.++. +.. ....+...-.....+++.|.. +..+.
T Consensus 80 ~~P~GlAvD~~~-~~LY~tD~~~~~I~v~~~d-G~~--~~~l~~~~l~~P~~iavdp~~----------------G~lY~ 139 (628)
T 4a0p_A 80 DYPEGMAVDWLG-KNLYWADTGTNRIEVSKLD-GQH--RQVLVWKDLDSPRALALDPAE----------------GFMYW 139 (628)
T ss_dssp SCCCEEEEETTT-TEEEEEETTTTEEEEEETT-STT--CEEEECSSCCCEEEEEEETTT----------------TEEEE
T ss_pred CCcceEEEEeCC-CEEEEEECCCCEEEEEecC-CCc--EEEEEeCCCCCcccEEEccCC----------------CeEEE
Confidence 346678887653 4566666666777776652 211 111111112234567777743 22233
Q ss_pred Ee-cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762 193 SG-GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV 271 (318)
Q Consensus 193 sg-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v 271 (318)
+- +..+.|...+++........ . .-...+.|+++++ .+.+..+=...+.|...++.+... ..+.......
T Consensus 140 tD~g~~~~I~r~~~dG~~~~~l~--~-~~~~P~GlalD~~---~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l~~P 210 (628)
T 4a0p_A 140 TEWGGKPKIDRAAMDGSERTTLV--P-NVGRANGLTIDYA---KRRLYWTDLDTNLIESSNMLGLNR---EVIADDLPHP 210 (628)
T ss_dssp EECSSSCEEEEEETTSCSCEEEE--C-SCSSEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSC---EEEEECCSCE
T ss_pred eCCCCCCEEEEEeCCCCceEEEE--C-CCCCcceEEEccc---cCEEEEEECCCCEEEEEcCCCCce---EEeeccCCCc
Confidence 32 33567777777765432222 2 3455789999986 345555555678899998876432 2222223345
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762 272 WNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306 (318)
Q Consensus 272 ~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~ 306 (318)
..+++.. +..+++-...+.|...+..++.....+
T Consensus 211 ~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 211 FGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred eEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEE
Confidence 6788864 445544445677777775555444433
No 321
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.86 E-value=6.4 Score=37.10 Aligned_cols=55 Identities=7% Similarity=-0.080 Sum_probs=33.5
Q ss_pred CeEEEEEccCCeEEEEEEcccCCC--------CeeEEEEc-cCCCCCc---cEEEEEeCCCeEEEEEcCCCc
Q psy2762 198 NLIKIWKQEGDKWIEETKLENHSD--------WVRDVAWA-PSWGLSK---CMIASCSQDRKVIIWTSNDYV 257 (318)
Q Consensus 198 ~~i~iwd~~~~~~~~~~~~~~h~~--------~V~~v~~s-p~~~~~~---~~l~s~s~D~~i~vw~~~~~~ 257 (318)
+.|.-+|.++++..=......|.. ++. +... . +| ..++.++.++.+.+.|..+..
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~----~G~~~~~v~~~~~~G~l~~lD~~tG~ 344 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDK----DGKARKLLTHPDRNGIVYTLDRTDGA 344 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECT----TSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-Eecccc----CCcEEEEEEEECCCcEEEEEECCCCC
Confidence 378888988886543334443422 221 1221 2 24 567788899999999987654
No 322
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.33 E-value=7.2 Score=36.43 Aligned_cols=68 Identities=12% Similarity=0.137 Sum_probs=37.8
Q ss_pred CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc--CeE-EEEeeCCCCCcEEEEeec-----CCeEEEEEeecCCCCc
Q psy2762 80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS--SVN-SIAWAPKEFGLILACGSS-----DGTISFLTYMSDTNSW 150 (318)
Q Consensus 80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~--~v~-~v~~~p~~~~~~lasgs~-----d~~i~i~~~~~~~~~~ 150 (318)
+..++.++.|+.+..+|..+++..=...+..+.. .+. ..... + +.+++.... ++.|..+|..+++..|
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~--g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-K--DTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-T--TEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-C--CEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 4677888889999999998887432223322110 111 11111 2 444443332 7888888876555333
No 323
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.05 E-value=8.9 Score=36.81 Aligned_cols=183 Identities=11% Similarity=0.125 Sum_probs=87.2
Q ss_pred CCcEEEEEECCC------eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeecCCCCc
Q psy2762 79 FGTLLASCSYDR------KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMSDTNSW 150 (318)
Q Consensus 79 ~~~~las~s~Dg------~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~~~~~~ 150 (318)
++.+++.||.++ .+-++|+.+..|.....+......-.++.+. + +.+++.|+.++ .+.+||+ ..+.|
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~-~--~~iyv~GG~~~~~~v~~yd~--~t~~W 525 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLP-D--GNVLILGGVTEGPAMLLYNV--TEEIF 525 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECT-T--SCEEEECCBCSSCSEEEEET--TTTEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEc-C--CEEEEECCCCCCCCEEEEEC--CCCce
Confidence 367777877643 4778888887775543333211222223322 3 56788887655 4555654 33345
Q ss_pred ceeeecc----cccccceeeeCCCCCCCccccccCCCCCCccceEEEecC--C-----CeEEEEEccCCe------EEEE
Q psy2762 151 ESRKIAA----HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC--D-----NLIKIWKQEGDK------WIEE 213 (318)
Q Consensus 151 ~~~~~~~----h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~--d-----~~i~iwd~~~~~------~~~~ 213 (318)
......+ .......+.+.... +..++.||. + +.+.+||+.++. |...
T Consensus 526 ~~~~~~g~~p~~r~~~~a~v~~~~~----------------~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~ 589 (695)
T 2zwa_A 526 KDVTPKDEFFQNSLVSAGLEFDPVS----------------KQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKK 589 (695)
T ss_dssp EECCCSSGGGGSCCBSCEEEEETTT----------------TEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE
T ss_pred EEccCCCCCCCcccceeEEEEeCCC----------------CEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEc
Confidence 4322111 01111112222210 235566665 2 458899988887 5544
Q ss_pred EEcc-cCCCCeeEEEEccCCCCCccEEEEEeCC--------CeEEEEEcCCCcceeeEEeeecC------CcE-EEEEEc
Q psy2762 214 TKLE-NHSDWVRDVAWAPSWGLSKCMIASCSQD--------RKVIIWTSNDYVTWTPFIMNTFD------DVV-WNVSWS 277 (318)
Q Consensus 214 ~~~~-~h~~~V~~v~~sp~~~~~~~~l~s~s~D--------~~i~vw~~~~~~~~~~~~~~~~~------~~v-~~v~~s 277 (318)
.... .....-..+.+. ++.+++.||.+ ..+.+||..+. .|....+.... ..+ .++...
T Consensus 590 ~~~p~~~R~~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~-~W~~~~~p~~~~~~~~p~~~gh~~~~~ 663 (695)
T 2zwa_A 590 LQHPLFQRYGSQIKYIT-----PRKLLIVGGTSPSGLFDRTNSIISLDPLSE-TLTSIPISRRIWEDHSLMLAGFSLVST 663 (695)
T ss_dssp EECGGGCCBSCEEEEEE-----TTEEEEECCBCSSCCCCTTTSEEEEETTTT-EEEECCCCHHHHHHSCCCCSSCEEECC
T ss_pred CCCCCCCcccceEEEeC-----CCEEEEECCccCCCCCCCCCeEEEEECCCC-eEEEeeccccccCCCCccceeeeEEEe
Confidence 4321 111112223332 15677777743 45888988764 35421111100 000 233444
Q ss_pred CCCCEEEEEeC
Q psy2762 278 LTGDILTVSCG 288 (318)
Q Consensus 278 pdg~~l~s~~~ 288 (318)
++|+.++.||.
T Consensus 664 ~~g~i~v~GGg 674 (695)
T 2zwa_A 664 SMGTIHIIGGG 674 (695)
T ss_dssp ---CEEEECCE
T ss_pred CCCEEEEEeCC
Confidence 56677777764
No 324
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=87.67 E-value=3.5 Score=35.88 Aligned_cols=109 Identities=12% Similarity=0.089 Sum_probs=55.0
Q ss_pred cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE-EEEc----ccCCCCeeEEEEccCCCCCc
Q psy2762 162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE-ETKL----ENHSDWVRDVAWAPSWGLSK 236 (318)
Q Consensus 162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~-~~~~----~~h~~~V~~v~~sp~~~~~~ 236 (318)
...++|.|+ +.+|..+...+.|++++.+. .... ...+ .........|+|+|++..++
T Consensus 20 P~~i~~~pd-----------------G~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g 81 (353)
T 2g8s_A 20 PWALAFLPD-----------------NHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSR 81 (353)
T ss_dssp EEEEEECST-----------------TCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHC
T ss_pred cEEEEEcCC-----------------CCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCC
Confidence 356778886 34244455678999987543 2110 1111 11123468999999532234
Q ss_pred cEEEEEeC-------CCeEEEEEcCCCcc-e-eeE-Eeeec------CCcEEEEEEcCCCCEEEEEeC
Q psy2762 237 CMIASCSQ-------DRKVIIWTSNDYVT-W-TPF-IMNTF------DDVVWNVSWSLTGDILTVSCG 288 (318)
Q Consensus 237 ~~l~s~s~-------D~~i~vw~~~~~~~-~-~~~-~~~~~------~~~v~~v~~spdg~~l~s~~~ 288 (318)
.+.++-+. ...|..|+...... . ... .+... ...-..++|.|||.++++.+.
T Consensus 82 ~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 82 RIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred EEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 45554433 22455555543210 0 111 11111 112467999999976666543
No 325
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.51 E-value=19 Score=33.93 Aligned_cols=228 Identities=7% Similarity=-0.049 Sum_probs=114.5
Q ss_pred CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc
Q psy2762 34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS 113 (318)
Q Consensus 34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~ 113 (318)
.+.|++.+++.. ......+........+++|.+ .++.++.+=...+.|..+++........ .+...-.
T Consensus 17 ~~~I~~i~~~~~----------~~~~~~~~~~~~~~~~ld~~~-~~~~ly~sD~~~~~I~r~~~~g~~~~~~-v~~~~~~ 84 (619)
T 3s94_A 17 RRDLRLVDATNG----------KENATIVVGGLEDAAAVDFVF-SHGLIYWSDVSEEAIKRTEFNKTESVQN-VVVSGLL 84 (619)
T ss_dssp SSBEEEECCC-------------------CBCCSCEEEEEEET-TTTEEEEEETTTTEEEEEEC-----CEE-EECSSCS
T ss_pred cccEEEEeCCCC----------cceEEEEEcCCCceEEEEEEe-CCCEEEEEECCCCeEEEEEccCCCceEE-EEeCCCC
Confidence 567888887521 001111222344567888864 3455555544567888888765421111 1222224
Q ss_pred CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEE
Q psy2762 114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV 192 (318)
Q Consensus 114 ~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la 192 (318)
....+++.+.. +.++.+-...+.|.+.+.. +.. ...+. ..-.....+++.|.. +..+.
T Consensus 85 ~P~GlAvD~~~-~~ly~~d~~~~~I~v~~~d-G~~---~~~l~~~~l~~P~~Iavdp~~----------------g~ly~ 143 (619)
T 3s94_A 85 SPDGLACDWLG-EKLYWTDSETNRIEVSNLD-GSL---RKVLFWQELDQPRAIALDPSS----------------GFMYW 143 (619)
T ss_dssp CEEEEEEETTT-TEEEEEETTTTEEEEEETT-SCS---CEEEECSSCSCCCCEEEETTT----------------TEEEE
T ss_pred CcCeEEEEecC-CEEEEEeCCCCEEEEEECC-CCC---EEEEEeCCCCCCceEEEecCC----------------CeEEE
Confidence 67889998854 5566666667888877652 211 11121 222234566776642 22233
Q ss_pred Ee-cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762 193 SG-GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV 271 (318)
Q Consensus 193 sg-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v 271 (318)
+- +..+.|...++++....... ...-.+.+.|+++|+ .+.+..+=.....|...++.+..... .........
T Consensus 144 tD~g~~~~I~r~~~dG~~~~~l~--~~~~~~P~Glald~~---~~~LY~aD~~~~~I~~~~~dG~~~~~--~~~~~~~~P 216 (619)
T 3s94_A 144 TDWGEVPKIERAGMDGSSRFIII--NSEIYWPNGLTLDYE---EQKLYWADAKLNFIHKSNLDGTNRQA--VVKGSLPHP 216 (619)
T ss_dssp EECSSSCEEEEEETTSCSCEEEE--CSSCSSEEEEEEETT---TTEEEEEETTTCCEEEESSSCCEEC-----------C
T ss_pred eccCCCCEEEEEECCCCceEEEE--eCCCCCCcEEEEEcc---CCEEEEEeCCCCeEEEecCCCCccEE--EEeCCCCCc
Confidence 32 33456666666654322221 223345789999986 35555555566778888876533211 111111223
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762 272 WNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302 (318)
Q Consensus 272 ~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~ 302 (318)
..+++..+ ..+.+-...+.|..-+..++..
T Consensus 217 ~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 217 FALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp CCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred eEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 46777655 3444434566777777555443
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.16 E-value=16 Score=31.71 Aligned_cols=107 Identities=13% Similarity=0.079 Sum_probs=56.3
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe----cccccCeEEEEecCC--CCCcEEEEEE-
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL----KGHSGPVWQVAWAHP--QFGTLLASCS- 87 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~----~~h~~~V~~v~~~~~--~~~~~las~s- 87 (318)
.-..++|.|+|.++++--..|.|++++.... ....+..+ ....+....+++.++ .++.+.++=+
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g---------~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTG---------RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTC---------CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCC---------cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 4567999999998887655898888865321 11222222 123455788898532 1344444322
Q ss_pred -CCCeEEEEeCCCC--------cEEEEE-EecC-CCcCeEEEEeeCCCCCcEEEEe
Q psy2762 88 -YDRKVIIWRGDNG--------NWFKYY-EYNN-HDSSVNSIAWAPKEFGLILACG 132 (318)
Q Consensus 88 -~Dg~v~vWd~~~~--------~~~~~~-~~~~-h~~~v~~v~~~p~~~~~~lasg 132 (318)
.+..|.-|....+ ....++ .+.. .......|+|.|+ +.++++.
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD--G~Lyvt~ 157 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD--KMLYAGT 157 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT--SCEEEEC
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC--CCEEEEE
Confidence 3444444544331 111222 2321 1123567999998 4455543
No 327
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=85.03 E-value=28 Score=33.49 Aligned_cols=224 Identities=17% Similarity=0.186 Sum_probs=104.6
Q ss_pred cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC----CCcCeEEEEeeCCCCCcEEEEeecC------C
Q psy2762 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN----HDSSVNSIAWAPKEFGLILACGSSD------G 136 (318)
Q Consensus 67 ~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~~lasgs~d------~ 136 (318)
+.|..|++.+ .+...+..+...+.|.-++-....+..+....+ ....|.+|++.|...+.+++..+.. +
T Consensus 23 g~i~~i~~~p-~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNE-TEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECS-SSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECC-CCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 3788999854 445556666655655444433334444221011 0245899999996555665554321 1
Q ss_pred eEEEEEeecCCCCcceeeeccc----c---cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-C
Q psy2762 137 TISFLTYMSDTNSWESRKIAAH----T---IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-D 208 (318)
Q Consensus 137 ~i~i~~~~~~~~~~~~~~~~~h----~---~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~ 208 (318)
...||...+.-+.|+....... . ..+..++++|.. ...|..+...+ -.||.... +
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~----------------~~~v~~g~~~g-~gl~~S~DgG 164 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPND----------------NRILYLGTRCG-NGLWRSTDYG 164 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSC----------------TTCEEEECSTT-CCEEEESSTT
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCC----------------CCEEEEeeccC-CcEEEeCCCC
Confidence 2456655444445554332111 0 012456666642 12344444221 12454332 2
Q ss_pred -eEEEEEEcccC--------------CCCeeEEEEccCCCC---CccEEEEEeCCCeEEEEEcCC-CcceeeEEeeecCC
Q psy2762 209 -KWIEETKLENH--------------SDWVRDVAWAPSWGL---SKCMIASCSQDRKVIIWTSND-YVTWTPFIMNTFDD 269 (318)
Q Consensus 209 -~~~~~~~~~~h--------------~~~V~~v~~sp~~~~---~~~~l~s~s~D~~i~vw~~~~-~~~~~~~~~~~~~~ 269 (318)
.+.+...+..+ ...+..+.++|.... ....|..+..|+.-.||...+ ...|....-.....
T Consensus 165 ~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~ 244 (737)
T 2cn3_A 165 VTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGL 244 (737)
T ss_dssp SSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCCSS
T ss_pred cceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCCcc
Confidence 34332222211 123677888875210 012444454454333554433 33454321000111
Q ss_pred cEEEEEEcCCCCEEEEEeC-------CCeEEEEEECC-CCceEEEee
Q psy2762 270 VVWNVSWSLTGDILTVSCG-------DNSVSLWKENT-DGAWQCITE 308 (318)
Q Consensus 270 ~v~~v~~spdg~~l~s~~~-------D~~v~iW~~~~-~~~~~~~~~ 308 (318)
....+.++|++.+.++... +..-.||..+. +..|..+..
T Consensus 245 ~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~ 291 (737)
T 2cn3_A 245 LPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITP 291 (737)
T ss_dssp EEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCS
T ss_pred cceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccC
Confidence 2345678887777665532 13456776544 456886654
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=85.01 E-value=37 Score=34.76 Aligned_cols=234 Identities=11% Similarity=0.032 Sum_probs=117.3
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCC----CCcEEEEEEC-C
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ----FGTLLASCSY-D 89 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~----~~~~las~s~-D 89 (318)
.|..++.+ +.+++.++ ++.+.++.++.. .-..+... .-.+.|.|+++.+.. .+.++|.|.+ |
T Consensus 515 ~I~~As~n--~~~vvva~-g~~l~~fel~~~---------~L~~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d 581 (1158)
T 3ei3_A 515 NISVASCN--SSQVVVAV-GRALYYLQIHPQ---------ELRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTD 581 (1158)
T ss_dssp CCCEEEEC--SSEEEEEE-TTEEEEEEEETT---------EEEEEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTT
T ss_pred EEEEEEeC--CCEEEEEE-CCEEEEEEeeCC---------ceeeeccc-CCCCceEEEEeecCCCCcccccEEEEEECCC
Confidence 34444443 23555554 577878777521 00112221 225689999986322 2479999997 9
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-e-ecccccccceeee
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR-K-IAAHTIGCNAVSW 167 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~-~-~~~h~~~v~~~~~ 167 (318)
++|+|+.+..-+......+.. .....++.+..-+...++.+|-.||.+.-+.+.......... . ..+ ..++.-..+
T Consensus 582 ~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~ 659 (1158)
T 3ei3_A 582 ISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTF 659 (1158)
T ss_dssp TEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEE
T ss_pred CEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEE
Confidence 999999987655444444432 233445544432224678899999987666553222111111 1 112 112211111
Q ss_pred CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCe-eEEEEccCCCCCccEEEEEeCCC
Q psy2762 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWV-RDVAWAPSWGLSKCMIASCSQDR 246 (318)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V-~~v~~sp~~~~~~~~l~s~s~D~ 246 (318)
... +. ...||+++ +..-++-.+ +.+ ....+.. ..+ ....|+..... +. ++. ..++
T Consensus 660 ~~~--------------~~-~~V~a~s~--rp~liy~~~-~~l-~~s~l~~--~~v~~~~~F~se~~~-~g-~v~-~~~~ 715 (1158)
T 3ei3_A 660 RSL--------------ST-TNVFACSD--RPTVIYSSN-HKL-VFSNVNL--KEVNYMCPLNSDGYP-DS-LAL-ANNS 715 (1158)
T ss_dssp ESS--------------SC-EEEEEESS--SCEEEEESS-SSE-EEEEBSS--SCCCEEEEECCSSST-TE-EEE-ECSS
T ss_pred eeC--------------Cc-eeEEEECC--CCEEEEEcC-Cce-EEeccCh--HHhceEeccCcccCC-Cc-EEE-EcCC
Confidence 110 00 12344432 333334322 222 2222211 123 23455443211 22 333 3356
Q ss_pred eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762 247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG 288 (318)
Q Consensus 247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~ 288 (318)
.++|..+.+...+... .-.....+..++++|+.+.++.+..
T Consensus 716 ~LrI~~i~~~~~~~~~-~ipL~~Tprri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 716 TLTIGTIDEIQKLHIR-TVPLYESPRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp CEEEEEECCSSSEEEE-EEECSSEEEEEEEEGGGTEEEEEEE
T ss_pred ceEEEEecccCCeeEE-EEeCCCCceEEEEcCCCCEEEEEEE
Confidence 6999988765544332 2345567899999999887766553
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.71 E-value=22 Score=32.19 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=52.4
Q ss_pred EEEecCCCeEEEEEccCCeE-EEEEEcc-----c----CCCCeeEEEEccCCCCCccEEEEEeCCC------------eE
Q psy2762 191 LVSGGCDNLIKIWKQEGDKW-IEETKLE-----N----HSDWVRDVAWAPSWGLSKCMIASCSQDR------------KV 248 (318)
Q Consensus 191 lasgs~d~~i~iwd~~~~~~-~~~~~~~-----~----h~~~V~~v~~sp~~~~~~~~l~s~s~D~------------~i 248 (318)
|......|.|++++...... .....+. + ...-...|+|+|++..++.+.++-+.+. .|
T Consensus 29 l~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v 108 (463)
T 2wg3_C 29 LFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRV 108 (463)
T ss_dssp EEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEE
T ss_pred EEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEE
Confidence 45556789999997543210 0111111 1 1234788999997544455555544321 33
Q ss_pred EEEEcCCC--c-----c-eeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762 249 IIWTSNDY--V-----T-WTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDN 290 (318)
Q Consensus 249 ~vw~~~~~--~-----~-~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~ 290 (318)
.-|.+... . . ..+.... .....-..++|.|||.+.++.++.+
T Consensus 109 ~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 109 VEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp EEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred EEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 33555421 0 0 1111111 1123567899999998888777543
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=81.28 E-value=5 Score=32.69 Aligned_cols=61 Identities=10% Similarity=0.048 Sum_probs=37.5
Q ss_pred eEEEEccCCCCCccEEEEEeCCCeEEEEEcCC--Cccee---eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy2762 224 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSND--YVTWT---PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292 (318)
Q Consensus 224 ~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~--~~~~~---~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v 292 (318)
..+-|.|+ |.+.++ .|+.|.-++..+ ...|. ...-..--..+..|.|.|+|.+.|.. |+.+
T Consensus 91 ~a~~fD~~----G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 91 QFLFFDPN----GYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp SEEEECTT----SCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred eEEEECCC----CCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 67889986 655555 669887776522 11221 11111111457899999999888766 6663
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=81.10 E-value=21 Score=29.06 Aligned_cols=151 Identities=12% Similarity=0.168 Sum_probs=74.7
Q ss_pred CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC---Ccc--eeeec--ccccccceeeeCCCCCCCccccccCCCCCC
Q psy2762 114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN---SWE--SRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGG 186 (318)
Q Consensus 114 ~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~---~~~--~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 186 (318)
.+..++|+|+ +.+.+. .++. +|....... .|- ...+- +.. .-..+.|.|+
T Consensus 42 ~~~~laf~P~--G~LYaV--~~G~--Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~---------------- 98 (236)
T 1tl2_A 42 NFKFLFLSPG--GELYGV--LNDK--IYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPN---------------- 98 (236)
T ss_dssp TCSEEEECTT--SCEEEE--ETTE--EEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTT----------------
T ss_pred cceeEEECCC--ccEEEE--eCCe--EEEECCCCCCcccccccccEecccccc-cceEEEECCC----------------
Confidence 5679999997 666666 5665 554432221 110 01110 000 1256667775
Q ss_pred ccceEEEecCCCeEEEEEccCC---eEEEE-EEc-ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCC--cce
Q psy2762 187 VAKRLVSGGCDNLIKIWKQEGD---KWIEE-TKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY--VTW 259 (318)
Q Consensus 187 ~~~~lasgs~d~~i~iwd~~~~---~~~~~-~~~-~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~--~~~ 259 (318)
+...++ .||.|+-++.-++ .+.-. ..+ .+--..+..|.|.|+ |.+.+.. |+.+.-+..... ..|
T Consensus 99 -G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~----G~Lyav~--dg~lyr~~~P~~~~~~w 169 (236)
T 1tl2_A 99 -GYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPN----GYLYAVH--GQQFYKALPPVSNQDNW 169 (236)
T ss_dssp -SCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTT----SCEEEEE--TTEEEEECCCSSTTCCH
T ss_pred -CCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCC----ceEEEEe--CCcEEecCCCCCCCccc
Confidence 343444 6698887764221 11000 011 111134789999996 5555444 777433221100 011
Q ss_pred ---eeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762 260 ---TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300 (318)
Q Consensus 260 ---~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~ 300 (318)
........-..-..+.|+|+|.+.+.. ++ +||.....
T Consensus 170 l~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 170 LARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp HHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEESCC
T ss_pred ccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEecCCc
Confidence 011111112234557799999888766 66 67876554
No 332
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=78.83 E-value=32 Score=29.89 Aligned_cols=34 Identities=18% Similarity=0.433 Sum_probs=20.4
Q ss_pred EEEEEcCC-CCEEEEEeCCCeEEEEEECCCC-ceEEEe
Q psy2762 272 WNVSWSLT-GDILTVSCGDNSVSLWKENTDG-AWQCIT 307 (318)
Q Consensus 272 ~~v~~spd-g~~l~s~~~D~~v~iW~~~~~~-~~~~~~ 307 (318)
..++++|. ...|..++.++. ||....+| .|..+.
T Consensus 344 ~~~~~~p~~~~~l~~g~~~g~--l~~S~D~G~tW~~~~ 379 (394)
T 3b7f_A 344 QAMTADAHAPVGVYFGTTGGE--IWASADEGEHWQCIA 379 (394)
T ss_dssp BSEEECCSSSCCEEEECTTSC--EEEESSTTSBCEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCe--EEEECCCCCCceEcc
Confidence 35788885 344665665554 45555544 588765
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=77.56 E-value=24 Score=30.48 Aligned_cols=121 Identities=12% Similarity=0.157 Sum_probs=58.8
Q ss_pred CcEEEEEECCCeEEEEeCCCCcEEEEEEecCC-CcCeEEEEeeCC--CCCcEEEEe-ecCCeEEEEEeecCCCCcceeee
Q psy2762 80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNH-DSSVNSIAWAPK--EFGLILACG-SSDGTISFLTYMSDTNSWESRKI 155 (318)
Q Consensus 80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~--~~~~~lasg-s~d~~i~i~~~~~~~~~~~~~~~ 155 (318)
+.+++.++.||.|...|..+++ ..++++.. ..++.... .|. ..+..++.. +.||.|..++...+...+ ..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~--~~W~~~~~~~~p~~~~~-~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~---~~ 83 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGH--IIWSIEPENFQPLIEIQ-EPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL---PL 83 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTE--EEEEECGGGSCCSEECC-CSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE---EE
T ss_pred CCEEEEEeCCCeEEEEECCCCc--EEEEecCCccCCcEEec-CCccccCCcEEEEEECCCCEEEEEECCCCcEEe---ee
Confidence 4678888999999999988886 45555432 11222111 010 012333333 578888776643221111 11
Q ss_pred c-ccccccceeee--CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE
Q psy2762 156 A-AHTIGCNAVSW--GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET 214 (318)
Q Consensus 156 ~-~h~~~v~~~~~--~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~ 214 (318)
. ........+.. .|-. .+. + ... .+..+.+|+.++.+.-.|+.+++..-..
T Consensus 84 ~~~~lv~~SP~~~~~~pvv-----~~~-~-~~~-~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 84 SIRQLVSTSPLHLKTNIVV-----NDS-G-KIV-EDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp EHHHHHTTCSEEEECC------------------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred ccccceeccccccCCCcee-----ecc-c-ccc-cCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 1 00000111111 0000 000 0 000 0246889999999999999988754333
No 334
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=76.24 E-value=53 Score=30.99 Aligned_cols=181 Identities=10% Similarity=-0.095 Sum_probs=99.1
Q ss_pred CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceee
Q psy2762 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVS 166 (318)
Q Consensus 88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~ 166 (318)
....|+.-++.+........+.+ -..+..|+|.+.+ +.++.+-..++.|..+++. +.. ...+. ........++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~d~~~-~~lywtD~~~~~I~r~~~~-g~~---~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTG-VKEASALDFDVTD-NRIYWTDISLKTISRAFMN-GSA---LEHVVEFGLDYPEGMA 86 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCS-CSCEEEEEEETTT-TEEEEEETTTTEEEEEETT-SCS---CEEEECSSCSCCCEEE
T ss_pred eCCcEEEEECCCCCcceEEEcCC-CCceEEEEEECCC-CEEEEEECCCCeEEEEECC-CCC---cEEEEeCCCCCcceEE
Confidence 45678888877654322222222 2457789999874 5666666667777665542 111 11111 1111233444
Q ss_pred eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE-eCC
Q psy2762 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC-SQD 245 (318)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~-s~D 245 (318)
+.+.. ++.+.+-...+.|.+.++++...... +...-...+.|++.|. .|.++.+- +..
T Consensus 87 vD~~~----------------~~LY~tD~~~~~I~v~~~dG~~~~~l--~~~~l~~P~~iavdp~---~G~lY~tD~g~~ 145 (628)
T 4a0p_A 87 VDWLG----------------KNLYWADTGTNRIEVSKLDGQHRQVL--VWKDLDSPRALALDPA---EGFMYWTEWGGK 145 (628)
T ss_dssp EETTT----------------TEEEEEETTTTEEEEEETTSTTCEEE--ECSSCCCEEEEEEETT---TTEEEEEECSSS
T ss_pred EEeCC----------------CEEEEEECCCCEEEEEecCCCcEEEE--EeCCCCCcccEEEccC---CCeEEEeCCCCC
Confidence 44321 24455666677888888876532111 1122344689999985 35554443 234
Q ss_pred CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEEC
Q psy2762 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 298 (318)
Q Consensus 246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~ 298 (318)
..|...+..+... ..+.........++++++++.|.-+- ..+.|...+.+
T Consensus 146 ~~I~r~~~dG~~~---~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 146 PKIDRAAMDGSER---TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp CEEEEEETTSCSC---EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CEEEEEeCCCCce---EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 5666666655432 12222234678999999877666554 45566666543
No 335
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=74.78 E-value=40 Score=28.97 Aligned_cols=76 Identities=17% Similarity=0.134 Sum_probs=42.1
Q ss_pred CeeEEEEccCCC---CCccEEEEEeCCCeEEEEEcCCCccee-eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762 222 WVRDVAWAPSWG---LSKCMIASCSQDRKVIIWTSNDYVTWT-PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 222 ~V~~v~~sp~~~---~~~~~l~s~s~D~~i~vw~~~~~~~~~-~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~ 297 (318)
....+.|.+... ..+.++++--..+.|...++....... ...+......+..+++.|||.++++.. +..=+||.+
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td-~~~g~I~ri 350 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD-ESSGELLKV 350 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC-STTEEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe-CCCCEEEEE
Confidence 456677764211 136667666667777777665421111 111112234788999999998776543 223356765
Q ss_pred C
Q psy2762 298 N 298 (318)
Q Consensus 298 ~ 298 (318)
.
T Consensus 351 ~ 351 (353)
T 2g8s_A 351 S 351 (353)
T ss_dssp E
T ss_pred e
Confidence 3
No 336
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=73.33 E-value=70 Score=31.06 Aligned_cols=66 Identities=15% Similarity=0.236 Sum_probs=37.7
Q ss_pred ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC----CCcCeEEEEeeCCCCCcEEEEe
Q psy2762 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN----HDSSVNSIAWAPKEFGLILACG 132 (318)
Q Consensus 66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~~lasg 132 (318)
.+.|.+|++. |.+...+..+...+.|...+=....+.++..... ....+.+|++.|.+.+.+++..
T Consensus 14 ~g~i~~i~~~-p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAH-PKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEEC-SSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEEC-CCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 4678999985 4455667777777766555433333433211000 1236999999986434444443
No 337
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=64.38 E-value=61 Score=32.31 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=28.1
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 270 VVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 270 ~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
.+.+++..++..+|.+-+.|+++|||++.++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 46778888899999999999999999988863
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=56.76 E-value=1.1e+02 Score=27.38 Aligned_cols=65 Identities=11% Similarity=0.200 Sum_probs=38.9
Q ss_pred ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC------CCcCeEEEEeeCC---CCCcEEEEee
Q psy2762 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN------HDSSVNSIAWAPK---EFGLILACGS 133 (318)
Q Consensus 66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~------h~~~v~~v~~~p~---~~~~~lasgs 133 (318)
-..-++++|.+ +|.++++--..+.|.+++..++.......+.. .......|+|+|+ + +.+.++.+
T Consensus 26 l~~P~~~a~~p--dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~-g~lYv~~s 99 (454)
T 1cru_A 26 LNKPHALLWGP--DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNN-PYIYISGT 99 (454)
T ss_dssp CSSEEEEEECT--TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTS-CEEEEEEE
T ss_pred CCCceEEEEcC--CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcC-CEEEEEEe
Confidence 44567899963 58777664433578888765454333333321 1345679999995 3 45555554
No 339
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=54.44 E-value=1.6e+02 Score=28.43 Aligned_cols=88 Identities=14% Similarity=0.124 Sum_probs=46.1
Q ss_pred cccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEE-ec----C----CCcCeEEEEeeCCCCCcEEEEeec-
Q psy2762 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE-YN----N----HDSSVNSIAWAPKEFGLILACGSS- 134 (318)
Q Consensus 65 h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~-~~----~----h~~~v~~v~~~p~~~~~~lasgs~- 134 (318)
-.+.|.+|.+. |.+...+..+...+.|...+=....+.++.. +. + ....+.+|++.|...+.+++....
T Consensus 19 ~~g~i~~i~~~-p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~ 97 (763)
T 3a0f_A 19 GGGFISGLVAH-PTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDY 97 (763)
T ss_dssp BCSCEEEEEEC-SSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSC
T ss_pred CCCceeEEEeC-CCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccc
Confidence 45688999985 5556667777766655444322223433221 10 0 123589999998655555554432
Q ss_pred ---CCeEEEEEeecCCCCccee
Q psy2762 135 ---DGTISFLTYMSDTNSWESR 153 (318)
Q Consensus 135 ---d~~i~i~~~~~~~~~~~~~ 153 (318)
.....||.....-+.|+..
T Consensus 98 ~~~~~~~~i~~S~DgG~TW~~~ 119 (763)
T 3a0f_A 98 VQWDPWAAFLVSDDRGKTFKQY 119 (763)
T ss_dssp TTTCSCCEEEEESSTTSSCEEE
T ss_pred ccCCCCceEEEECCCCCCceec
Confidence 1113455443433455543
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=48.25 E-value=31 Score=34.41 Aligned_cols=30 Identities=23% Similarity=0.071 Sum_probs=25.3
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCC
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDR 44 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 44 (318)
.+.+++..++..++++-+.|+++|||++.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t 266 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLST 266 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTT
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCC
Confidence 456666778889999999999999999873
No 341
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=44.62 E-value=1.5e+02 Score=25.44 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=27.4
Q ss_pred CcEEEEEECCCeEEEEeCCC-CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee
Q psy2762 80 GTLLASCSYDRKVIIWRGDN-GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS 133 (318)
Q Consensus 80 ~~~las~s~Dg~v~vWd~~~-~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs 133 (318)
...|..|...|.+++-+-.. ..+...... .....|.+|++.|.+.+.+.+.+.
T Consensus 22 ~g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~~g~~ 75 (394)
T 3b7f_A 22 PVMLLVATIKGAWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERMLMAAR 75 (394)
T ss_dssp CCEEEEEETTEEEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEEEEEE
T ss_pred CCEEEEEecCceEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEEEEec
Confidence 34566677777443332221 244433211 224569999999843355555443
No 342
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=42.98 E-value=19 Score=36.73 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=25.8
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 271 VWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 271 v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
+.+++..++..+|.+-+.|+++|||++.++.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 3455667788999999999999999988873
No 343
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=42.75 E-value=31 Score=35.14 Aligned_cols=30 Identities=23% Similarity=0.071 Sum_probs=24.5
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCC
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDR 44 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 44 (318)
.+.+++..++..++++-+.|+++|||++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t 268 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLST 268 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCC
Confidence 444555667889999999999999999973
No 344
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=40.58 E-value=1.1e+02 Score=29.75 Aligned_cols=85 Identities=11% Similarity=0.193 Sum_probs=50.4
Q ss_pred CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee-----cCCcEEEEEEcCCC-CEEEEEeCCCe--
Q psy2762 220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT-----FDDVVWNVSWSLTG-DILTVSCGDNS-- 291 (318)
Q Consensus 220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~-----~~~~v~~v~~spdg-~~l~s~~~D~~-- 291 (318)
...|.+|.++|. +...+..+...+.|...+-. ...|++..... ....|.+++++|.. +.+..+.....
T Consensus 14 ~g~i~~i~~~p~---~~~~~~a~~~~ggv~rS~Dg-G~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 14 GGYITGIVAHPK---TKDLLYARTDIGGAYRWDAG-TSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD 89 (789)
T ss_dssp CSCEEEEEECSS---STTCEEEEESSSCEEEEETT-TTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred CCcEEEEEECCC---CCCEEEEEecCCCEEEecCC-CCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCC
Confidence 346999999996 34456667777776666533 34465422111 12369999999853 33444433222
Q ss_pred --EEEEEECCCC-ceEEEee
Q psy2762 292 --VSLWKENTDG-AWQCITE 308 (318)
Q Consensus 292 --v~iW~~~~~~-~~~~~~~ 308 (318)
-.||....+| .|+.+..
T Consensus 90 ~~~~v~~S~DgG~TW~~~~~ 109 (789)
T 1sqj_A 90 EWAAFYVSEDRGQSFTIYES 109 (789)
T ss_dssp SCCEEEEESSTTSEEEEEEC
T ss_pred cccEEEEECCCCCcceeccC
Confidence 5678766655 4987753
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=38.85 E-value=1.1e+02 Score=28.65 Aligned_cols=81 Identities=14% Similarity=0.219 Sum_probs=49.9
Q ss_pred eeeeeeecCCCCEEEEe-eCCCcEEEEEcCCCcC---CCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762 15 MIHDAEMDYLGLYLATC-SSDHTVKVFNLDRNLK---KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR 90 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~-s~D~~v~vwd~~~~~~---~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg 90 (318)
+.+.+.++|||+|++.+ -.+.+|.|+|...-.. ...... ...+....+.-.+ -...+|.. +|.-..|--.|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~-~~~~~ae~e~GlG-PlHt~Fd~--~G~aYTtlfidS 399 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADP-RDVIVGEPELGLG-PLHTTFDG--RGNAYTTLFIDS 399 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCG-GGGEEECCBCCSC-EEEEEECS--SSEEEEEETTTT
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCc-ccceEeeccCCCc-ccEEEECC--CCceEeeeeecc
Confidence 45668899999997765 4788999999862100 000001 1123334443333 35677853 576556666899
Q ss_pred eEEEEeCCC
Q psy2762 91 KVIIWRGDN 99 (318)
Q Consensus 91 ~v~vWd~~~ 99 (318)
.|.-|++..
T Consensus 400 qvvkWni~~ 408 (638)
T 3sbq_A 400 QVVKWNMEE 408 (638)
T ss_dssp EEEEEEHHH
T ss_pred eEEEEeccH
Confidence 999999864
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=37.92 E-value=1.8e+02 Score=24.30 Aligned_cols=92 Identities=9% Similarity=0.115 Sum_probs=44.7
Q ss_pred EecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC--eEEEEEcCCCcceeeEEeeecCCc
Q psy2762 193 SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR--KVIIWTSNDYVTWTPFIMNTFDDV 270 (318)
Q Consensus 193 sgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~--~i~vw~~~~~~~~~~~~~~~~~~~ 270 (318)
+......|.+-++.++..... +++ ... ..+.|+ +.+|+=...+. .|..-++.+.. ...+. ...
T Consensus 162 t~~g~~~Iy~~~l~g~~~~~l--~~~---~~~-~~~~P~----g~~iy~t~~~~~~~I~~~~ldG~~---~~~Lt--~~~ 226 (302)
T 3s25_A 162 NNPKNGQLYRYDTASQSEALF--YDC---NCY-KPVVLD----DTNVYYMDVNRDNAIVHVNINNPN---PVVLT--EAN 226 (302)
T ss_dssp ECTTTCCEEEEETTTTEEEEE--ECS---CEE-EEEEEE----TTEEEEEEGGGTTEEEEECSSSCC---CEECS--CSC
T ss_pred EeCCCceEEEEECCCCCEEEE--eCC---Ccc-ceeeec----CCEEEEEEcCCCcEEEEEECCCCC---eEEEe--CCC
Confidence 433456777777776643222 232 122 235575 44555444332 33333343322 12221 122
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762 271 VWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301 (318)
Q Consensus 271 v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~ 301 (318)
+ ..|+|+|++|.-+...+.=.|+.++.+|
T Consensus 227 ~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 227 I--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp E--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred c--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 3 3478888888765433234677777765
No 347
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=37.79 E-value=3.5e+02 Score=27.64 Aligned_cols=205 Identities=10% Similarity=0.067 Sum_probs=99.9
Q ss_pred CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCC----CCcEEEEeec-CCeEEEEE
Q psy2762 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE----FGLILACGSS-DGTISFLT 142 (318)
Q Consensus 68 ~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~----~~~~lasgs~-d~~i~i~~ 142 (318)
.|..++.+ +..++.++ ++.+.++.+..+......... -...|.|+++.|.. ...+++.|.. |++|+|++
T Consensus 515 ~I~~As~n----~~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 515 NISVASCN----SSQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCEEEEC----SSEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred EEEEEEeC----CCEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 46666543 23455554 678888877665433332222 35679999998643 2367888886 99999998
Q ss_pred eecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEc--cCCeEEEEE-EcccC
Q psy2762 143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ--EGDKWIEET-KLENH 219 (318)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~--~~~~~~~~~-~~~~h 219 (318)
+.. -.......+.. .....++.... . .. ..+|..|-.||.+--+.+ .++++.... .+-|
T Consensus 589 L~~-l~~~~~~~L~~-~~~p~si~l~~---------~-----~~-~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG- 650 (1158)
T 3ei3_A 589 LPS-FELLHKEMLGG-EIIPRSILMTT---------F-----ES-SHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG- 650 (1158)
T ss_dssp TTT-CCEEEEEECCS-SCCEEEEEEEE---------E-----TT-EEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-
T ss_pred CCC-CCeEEEEECCC-CCCCcEEEEEE---------e-----CC-CcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-
Confidence 732 11111111111 01111121110 0 00 247889999998765544 344433221 1223
Q ss_pred CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCC--CCEEEEEeCCCeEEEEEE
Q psy2762 220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLT--GDILTVSCGDNSVSLWKE 297 (318)
Q Consensus 220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spd--g~~l~s~~~D~~v~iW~~ 297 (318)
..+|.=..+... +..-+-+..++...++...+.. ..........-....|+.. ..-++.+ .++++||-.+
T Consensus 651 ~~pv~L~~~~~~----~~~~V~a~s~rp~liy~~~~~l---~~s~l~~~~v~~~~~F~se~~~~g~v~~-~~~~LrI~~i 722 (1158)
T 3ei3_A 651 TQPTVLRTFRSL----STTNVFACSDRPTVIYSSNHKL---VFSNVNLKEVNYMCPLNSDGYPDSLALA-NNSTLTIGTI 722 (1158)
T ss_dssp SSCCEEEEEESS----SCEEEEEESSSCEEEEESSSSE---EEEEBSSSCCCEEEEECCSSSTTEEEEE-CSSCEEEEEE
T ss_pred CCceEEEEEeeC----CceeEEEECCCCEEEEEcCCce---EEeccChHHhceEeccCcccCCCcEEEE-cCCceEEEEe
Confidence 334543344332 2222223335666666544321 1111111222344556432 1234433 3567999888
Q ss_pred CCCCceE
Q psy2762 298 NTDGAWQ 304 (318)
Q Consensus 298 ~~~~~~~ 304 (318)
+....|.
T Consensus 723 ~~~~~~~ 729 (1158)
T 3ei3_A 723 DEIQKLH 729 (1158)
T ss_dssp CCSSSEE
T ss_pred cccCCee
Confidence 6655543
No 348
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=37.38 E-value=53 Score=31.60 Aligned_cols=28 Identities=18% Similarity=0.301 Sum_probs=22.2
Q ss_pred eeeeeeecCCCCEEEEeeCCCcEEEEEcCC
Q psy2762 15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDR 44 (318)
Q Consensus 15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 44 (318)
.|.++.+ +..+|++-+.|+++|+|++.+
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t 250 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTS 250 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTT
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCC
Confidence 3554444 578999999999999999973
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=33.57 E-value=2.3e+02 Score=24.27 Aligned_cols=109 Identities=9% Similarity=0.020 Sum_probs=54.0
Q ss_pred EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-ccCeEEEEec-CCCCCcEEEEE-ECCCeEEEEeCCCCcEE
Q psy2762 27 YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-SGPVWQVAWA-HPQFGTLLASC-SYDRKVIIWRGDNGNWF 103 (318)
Q Consensus 27 ~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~-~~~~~~~las~-s~Dg~v~vWd~~~~~~~ 103 (318)
+++.++.||.|.-.|.+ +|+..=+++.- ..++....-. .+.++..++.. +.||.+..++..++...
T Consensus 12 ~V~v~t~dG~l~Ald~~-----------tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRR-----------NGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEETTSCEEEEETT-----------TTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred EEEEEeCCCeEEEEECC-----------CCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 56678889988888875 34444333322 1222221100 01123444443 57999999998777433
Q ss_pred EEEEecC--CCcCeEEEEeeCCC-------CCcEEEEeecCCeEEEEEeecCC
Q psy2762 104 KYYEYNN--HDSSVNSIAWAPKE-------FGLILACGSSDGTISFLTYMSDT 147 (318)
Q Consensus 104 ~~~~~~~--h~~~v~~v~~~p~~-------~~~~lasgs~d~~i~i~~~~~~~ 147 (318)
-...+.. ..+++.. .=.|-- .+..+.+|+.++.+...|..++.
T Consensus 81 ~~~~~~~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 81 LPLSIRQLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp EEEEHHHHHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred eeeccccceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 2222221 1122221 100000 13356788888888777765554
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=33.12 E-value=75 Score=30.54 Aligned_cols=37 Identities=11% Similarity=0.137 Sum_probs=29.1
Q ss_pred CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEe
Q psy2762 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY 108 (318)
Q Consensus 68 ~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~ 108 (318)
.|.++.+ +..+|++-+.|+++|+|++.+++++....+
T Consensus 223 ~Is~~~~----~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF----HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE----TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc----CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666554 257999999999999999999876666555
No 351
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=33.02 E-value=3.3e+02 Score=25.95 Aligned_cols=173 Identities=17% Similarity=0.262 Sum_probs=82.7
Q ss_pred CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-c----cccccceeeeCCCCCCCccccccCCCCCCcc
Q psy2762 114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-A----HTIGCNAVSWGPGIGSLSELDLKGSKLGGVA 188 (318)
Q Consensus 114 ~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~----h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 188 (318)
.|..|+++|.+.+.+++ +...+. +|.....-..|...... . ....+..++++|.... .
T Consensus 24 ~i~~i~~~p~~~~~~~~-~~~~gg--v~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~--------------~ 86 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYA-RAAIGG--AYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPN--------------R 86 (737)
T ss_dssp CCCEEEECSSSTTCEEE-ECSSSC--EEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTT--------------C
T ss_pred eeeEEEECCCCCCEEEE-EecCCc--EEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCC--------------E
Confidence 79999999986666555 443443 45444443444421110 1 1235677888774210 1
Q ss_pred ceEEEecCC-----CeEEEEEccCC--eEEEEEE-cc--cC---CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762 189 KRLVSGGCD-----NLIKIWKQEGD--KWIEETK-LE--NH---SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255 (318)
Q Consensus 189 ~~lasgs~d-----~~i~iwd~~~~--~~~~~~~-~~--~h---~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~ 255 (318)
-+++++... +...||....+ .+.+... +. ++ ...+..|.++|. +...|..+...+ --||...+
T Consensus 87 v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~---~~~~v~~g~~~g-~gl~~S~D 162 (737)
T 2cn3_A 87 VYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPN---DNRILYLGTRCG-NGLWRSTD 162 (737)
T ss_dssp EEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSS---CTTCEEEECSTT-CCEEEESS
T ss_pred EEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCC---CCCEEEEeeccC-CcEEEeCC
Confidence 133333211 13566764432 3433221 11 00 012467999986 334455454332 13443333
Q ss_pred -CcceeeEE-eeec--------------CCcEEEEEEcCCC-------CEEEEEeCCCeEEEEEECCCC-ceEEEe
Q psy2762 256 -YVTWTPFI-MNTF--------------DDVVWNVSWSLTG-------DILTVSCGDNSVSLWKENTDG-AWQCIT 307 (318)
Q Consensus 256 -~~~~~~~~-~~~~--------------~~~v~~v~~spdg-------~~l~s~~~D~~v~iW~~~~~~-~~~~~~ 307 (318)
...|+... +... ...+..+.++|.. ..|..+..|+.-.||....+| -|+.+.
T Consensus 163 gG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~ 238 (737)
T 2cn3_A 163 YGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVP 238 (737)
T ss_dssp TTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECT
T ss_pred CCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECC
Confidence 33443211 1100 1237778898753 244455555544578766655 488665
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=30.78 E-value=2.9e+02 Score=24.69 Aligned_cols=29 Identities=17% Similarity=0.001 Sum_probs=20.8
Q ss_pred eeeeeeecCCCC-EEEEeeCCCcEEEEEcC
Q psy2762 15 MIHDAEMDYLGL-YLATCSSDHTVKVFNLD 43 (318)
Q Consensus 15 ~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~ 43 (318)
.-..|+|.|+|. +|+.+...|.|++++.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 345689999996 34445778999999753
No 353
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=27.93 E-value=3.7e+02 Score=25.00 Aligned_cols=162 Identities=9% Similarity=-0.017 Sum_probs=88.3
Q ss_pred cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecC
Q psy2762 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSD 146 (318)
Q Consensus 67 ~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~ 146 (318)
..+.+++|.. .++.++.+-...+.|..+++.......+. ...-.....+++.+.. +.++.+-+..+.|.+.+.. +
T Consensus 349 ~~~~~ld~d~-~~~~ly~sD~~~~~I~r~~~~g~~~~~v~--~~~~~~p~GlAvD~~~-~~lY~tD~~~~~I~v~~~~-G 423 (619)
T 3s94_A 349 RHAIAIDYDP-VEGYIYWTDDEVRAIRRSFIDGSGSQFVV--TAQIAHPDGIAVDWVA-RNLYWTDTGTDRIEVTRLN-G 423 (619)
T ss_dssp SSEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEE--CSSCSCCCEEEEETTT-TEEEEEETTTTEEEEEETT-S
T ss_pred CccEEEEEEc-CCCeEEEEeCCCCeEEEEEcCCCccEEEE--ECCCCCcCceEEeccc-CcEEEEeCCCCcEEEEeCC-C
Confidence 4567888864 34555656556788888887754322222 2222356678887643 4566665666777776542 1
Q ss_pred CCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cCCCeEEEEEccCCeEEEEEEcccCCCCee
Q psy2762 147 TNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDNLIKIWKQEGDKWIEETKLENHSDWVR 224 (318)
Q Consensus 147 ~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~ 224 (318)
. . ...+. ..-.....+++.|.. +..+.+- +....|...+++....... ....-.+.+
T Consensus 424 ~--~-~~~l~~~~l~~P~~iavdp~~----------------G~ly~tD~g~~~~I~r~~~dG~~~~~l--~~~~l~~P~ 482 (619)
T 3s94_A 424 T--M-RKILISEDLEEPRAIVLDPMV----------------GYMYWTDWGEIPKIERAALDGSDRVVL--VNTSLGWPN 482 (619)
T ss_dssp C--S-CEEEECTTCCSEEEEEEETTT----------------TEEEEEECSSSCEEEEEETTSCSCEEE--ECSSCSCEE
T ss_pred C--e-EEEEEECCCCCeeeEEEEcCC----------------CcEEEecCCCCCEEEEEccCCCccEEE--EeCCCCCCe
Confidence 1 1 11111 112234567777642 2222332 3345666666665432211 123345678
Q ss_pred EEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc
Q psy2762 225 DVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV 257 (318)
Q Consensus 225 ~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~ 257 (318)
.|+++++ .+.+..+=+..+.|...++.+..
T Consensus 483 GlalD~~---~~~LY~aD~~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 483 GLALDYD---EGKIYWGDAKTDKIEVMNTDGTG 512 (619)
T ss_dssp EEEEETT---TTEEEEEETTTTEEEEEESSSCC
T ss_pred eeEEccc---CCEEEEEECCCCEEEEEecCCCc
Confidence 9999985 34444444556778888876543
No 354
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=24.93 E-value=4.2e+02 Score=25.36 Aligned_cols=85 Identities=9% Similarity=0.125 Sum_probs=49.3
Q ss_pred CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee----------cCCcEEEEEEcCC--CCEEEEE
Q psy2762 219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT----------FDDVVWNVSWSLT--GDILTVS 286 (318)
Q Consensus 219 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~----------~~~~v~~v~~spd--g~~l~s~ 286 (318)
-...|.+|.++|. +...+..+...+.|...+- ....|++..... ....|.+++++|. +..++.+
T Consensus 19 ~~g~i~~i~~~p~---~~~~~y~~~~~ggv~~S~D-gG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 19 GGGFISGLVAHPT---EKDLIYARTDIGGTYRWNA-AKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp BCSCEEEEEECSS---STTCEEEEESSSCEEEEET-TTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCCceeEEEeCCC---CCCEEEEEeccCcEEEECC-CCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 4456999999997 3455666666665555433 233454432211 1235899999983 3444444
Q ss_pred eC----CCeEEEEEECCCC-ceEEEe
Q psy2762 287 CG----DNSVSLWKENTDG-AWQCIT 307 (318)
Q Consensus 287 ~~----D~~v~iW~~~~~~-~~~~~~ 307 (318)
+. .....||....+| -|+.+.
T Consensus 95 g~~~~~~~~~~i~~S~DgG~TW~~~~ 120 (763)
T 3a0f_A 95 GDYVQWDPWAAFLVSDDRGKTFKQYR 120 (763)
T ss_dssp CSCTTTCSCCEEEEESSTTSSCEEEE
T ss_pred cccccCCCCceEEEECCCCCCceecc
Confidence 32 1235678876666 498775
No 355
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=23.58 E-value=2.3e+02 Score=26.58 Aligned_cols=72 Identities=8% Similarity=-0.023 Sum_probs=46.7
Q ss_pred eeEEEEccCCCCCccEE-EEEeCCCeEEEEEcCCCcc-----------eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762 223 VRDVAWAPSWGLSKCMI-ASCSQDRKVIIWTSNDYVT-----------WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN 290 (318)
Q Consensus 223 V~~v~~sp~~~~~~~~l-~s~s~D~~i~vw~~~~~~~-----------~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~ 290 (318)
...+..+|+ |.++ +++-.+.++.|++.++... ....+. ...-..+..+|.++|....|---|.
T Consensus 325 PHGv~vsPD----Gkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 325 PHGCNTSSD----GKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-ELGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp CCCEEECTT----SCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-BCCSCEEEEEECSSSEEEEEETTTT
T ss_pred CcceeeCCC----CCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-cCCCcccEEEECCCCceEeeeeecc
Confidence 357889997 5555 5555699999999875210 001111 1223567899999995554444799
Q ss_pred eEEEEEECC
Q psy2762 291 SVSLWKENT 299 (318)
Q Consensus 291 ~v~iW~~~~ 299 (318)
.|--|++..
T Consensus 400 qvvkWni~~ 408 (638)
T 3sbq_A 400 QVVKWNMEE 408 (638)
T ss_dssp EEEEEEHHH
T ss_pred eEEEEeccH
Confidence 999999643
No 356
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=21.50 E-value=1.2e+02 Score=20.82 Aligned_cols=29 Identities=24% Similarity=0.226 Sum_probs=21.1
Q ss_pred CeEEEEeCCCCcEEEEEEecCCCcCeEEE
Q psy2762 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118 (318)
Q Consensus 90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v 118 (318)
-.|.|||+.++....++.+.+..+.+-|+
T Consensus 17 E~V~IvNvnNG~RfeTYvI~GerSG~I~l 45 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTYVILGKKRGEICV 45 (97)
T ss_dssp CEEEEEETTTCCEEEEECEEECSTTCEEE
T ss_pred CEEEEEECCCCceEEEEEEeeccCCeEEE
Confidence 36899999999888888777654444444
No 357
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=21.04 E-value=1.6e+02 Score=22.32 Aligned_cols=34 Identities=9% Similarity=0.190 Sum_probs=25.3
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEECCC-CceEEEee
Q psy2762 273 NVSWSLTGDILTVSCGDNSVSLWKENTD-GAWQCITE 308 (318)
Q Consensus 273 ~v~~spdg~~l~s~~~D~~v~iW~~~~~-~~~~~~~~ 308 (318)
=+.|.|+|.+.|.+...| ..=+++.. +.|.-+.|
T Consensus 114 p~eF~p~~~w~a~~~esG--~f~dvDLse~eW~DYDE 148 (164)
T 1zso_A 114 LIDFFPSNNFIVEDTKGK--LYYDVNLSDQNWCDYNE 148 (164)
T ss_dssp EEEECCCSCEEEEETTSC--EEEEECCTTSCEEEEET
T ss_pred eEEEecCCcEEEEECCCC--cEEeeecCCCceecccc
Confidence 479999999999886666 44455553 57988876
Done!