Your job contains 1 sequence.
>psy2762
MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA
ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW
APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLK
GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA
SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD
GAWQCITEMGKTSEQRAM
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2762
(318 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BVC4 - symbol:SEC13 "Uncharacterized protein"... 1022 3.7e-103 1
UNIPROTKB|P55735 - symbol:SEC13 "Protein SEC13 homolog" s... 1008 1.1e-101 1
UNIPROTKB|F1PDM3 - symbol:SEC13 "Uncharacterized protein"... 1005 2.3e-101 1
UNIPROTKB|Q3ZCC9 - symbol:SEC13 "Protein SEC13 homolog" s... 1001 6.2e-101 1
ZFIN|ZDB-GENE-040426-2649 - symbol:sec13 "SEC13 homolog (... 1000 7.9e-101 1
MGI|MGI:99832 - symbol:Sec13 "SEC13 homolog (S. cerevisia... 997 1.7e-100 1
RGD|1359555 - symbol:Sec13 "SEC13 homolog (S. cerevisiae)... 997 1.7e-100 1
FB|FBgn0024509 - symbol:Sec13 "Sec13 ortholog (S. cerevis... 957 2.9e-96 1
DICTYBASE|DDB_G0292052 - symbol:sec13 "putative transport... 848 1.0e-84 1
POMBASE|SPBC215.15 - symbol:sec13 "COPII-coated vesicle c... 787 3.0e-78 1
TAIR|locus:2045648 - symbol:AT2G30050 "AT2G30050" species... 752 1.5e-74 1
TAIR|locus:2100267 - symbol:AT3G01340 "AT3G01340" species... 730 3.2e-72 1
ASPGD|ASPL0000075365 - symbol:sec13 species:162425 "Emeri... 728 5.3e-72 1
CGD|CAL0004667 - symbol:SEC13 species:5476 "Candida albic... 713 2.1e-70 1
SGD|S000004198 - symbol:SEC13 "Structural component of 3 ... 700 4.9e-69 1
UNIPROTKB|A8XJ40 - symbol:npp-20 "Protein SEC13 homolog" ... 609 2.2e-59 1
WB|WBGene00003806 - symbol:npp-20 species:6239 "Caenorhab... 576 6.8e-56 1
UNIPROTKB|Q9N4A7 - symbol:npp-20 "Protein SEC13 homolog" ... 576 6.8e-56 1
UNIPROTKB|E3NCB9 - symbol:Cre-npp-20 "CRE-NPP-20 protein"... 563 1.6e-54 1
UNIPROTKB|F1SQA9 - symbol:SEC13 "Uncharacterized protein"... 523 2.8e-50 1
DICTYBASE|DDB_G0277257 - symbol:DDB_G0277257 "Nucleoporin... 305 1.9e-43 2
SGD|S000003068 - symbol:SEH1 "Component of two distinct c... 278 1.6e-32 2
UNIPROTKB|B3GEK9 - symbol:npp-20 "Nuclear pore complex pr... 334 3.0e-30 1
CGD|CAL0005451 - symbol:orf19.2186 species:5476 "Candida ... 334 3.0e-30 1
FB|FBgn0033247 - symbol:Nup44A "Nucleoporin at 44A" speci... 334 3.0e-30 1
UNIPROTKB|Q5A2S9 - symbol:SEH1 "Putative uncharacterized ... 334 3.0e-30 1
POMBASE|SPAC15F9.02 - symbol:seh1 "nucleoporin Seh1" spec... 264 7.6e-29 2
UNIPROTKB|Q5U4Y8 - symbol:seh1l "Nucleoporin seh1" specie... 303 5.7e-27 1
UNIPROTKB|Q6GNF1 - symbol:seh1l-b "Nucleoporin seh1-B" sp... 300 1.2e-26 1
ZFIN|ZDB-GENE-030131-6689 - symbol:seh1l "SEH1-like (S. c... 300 1.2e-26 1
UNIPROTKB|Q4FZW5 - symbol:seh1l-a "Nucleoporin seh1-A" sp... 299 1.5e-26 1
UNIPROTKB|C1BK83 - symbol:seh1l "Nucleoporin seh1" specie... 297 2.5e-26 1
UNIPROTKB|Q96EE3 - symbol:SEH1L "Nucleoporin SEH1" specie... 294 5.2e-26 1
UNIPROTKB|E1BYP7 - symbol:SEH1L "Uncharacterized protein"... 294 5.2e-26 1
UNIPROTKB|Q5RAN6 - symbol:SEH1L "Nucleoporin SEH1" specie... 294 5.2e-26 1
UNIPROTKB|A7YY75 - symbol:SEH1L "Nucleoporin SEH1" specie... 292 8.4e-26 1
MGI|MGI:1919374 - symbol:Seh1l "SEH1-like (S. cerevisiae"... 289 1.8e-25 1
UNIPROTKB|B7QKS1 - symbol:ISCW023049 "Probable cytosolic ... 160 3.3e-20 2
WB|WBGene00003804 - symbol:npp-18 species:6239 "Caenorhab... 224 4.9e-20 2
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 164 5.2e-18 2
UNIPROTKB|I3LR40 - symbol:SEH1L "Uncharacterized protein"... 224 1.1e-17 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 163 1.7e-17 2
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 171 2.4e-17 2
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 169 2.8e-17 2
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 182 7.3e-16 2
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 209 2.8e-15 1
UNIPROTKB|F1SU35 - symbol:CIAO1 "Uncharacterized protein"... 148 9.2e-15 2
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 186 3.2e-14 2
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 144 3.8e-14 2
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 199 5.5e-14 1
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 196 7.4e-14 2
UNIPROTKB|B4JW81 - symbol:Ciao1 "Probable cytosolic iron-... 151 1.5e-13 2
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 192 5.2e-13 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 184 3.8e-12 1
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 184 3.8e-12 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 172 1.2e-10 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 170 1.9e-10 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 170 1.9e-10 1
TAIR|locus:2123752 - symbol:AT4G32990 "AT4G32990" species... 169 2.4e-10 1
POMBASE|SPAC806.02c - symbol:SPAC806.02c "Par A family AT... 148 2.4e-10 2
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 169 2.5e-10 1
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 168 3.2e-10 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 177 3.4e-10 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 166 5.7e-10 1
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 166 5.7e-10 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 120 5.8e-10 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 133 6.0e-10 2
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 165 6.1e-10 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 115 7.7e-10 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 175 8.3e-10 1
FB|FBgn0033972 - symbol:Ciao1 "Ciao1" species:7227 "Droso... 164 9.8e-10 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 167 1.4e-09 1
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 161 2.2e-09 1
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 161 2.2e-09 1
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 161 2.2e-09 1
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 103 2.3e-09 2
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 103 2.3e-09 2
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 103 2.3e-09 2
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 103 2.3e-09 2
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 103 2.3e-09 2
UNIPROTKB|B1N1C2 - symbol:GNB2L1 "Uncharacterized protein... 103 2.3e-09 2
UNIPROTKB|Q4R7Y4 - symbol:GNB2L1 "Guanine nucleotide-bind... 103 2.3e-09 2
UNIPROTKB|Q5U275 - symbol:gnb2l1 "LOC495666 protein" spec... 103 2.3e-09 2
MGI|MGI:101849 - symbol:Gnb2l1 "guanine nucleotide bindin... 103 2.3e-09 2
RGD|69229 - symbol:Gnb2l1 "guanine nucleotide binding pro... 103 2.3e-09 2
UNIPROTKB|G8JL27 - symbol:GNB2L1 "Guanine nucleotide-bind... 103 2.4e-09 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 163 2.4e-09 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 162 2.8e-09 1
TAIR|locus:2172432 - symbol:AT5G43920 "AT5G43920" species... 132 3.2e-09 2
ZFIN|ZDB-GENE-060503-525 - symbol:elp2 "elongation protei... 164 5.3e-09 1
POMBASE|SPAC343.04c - symbol:SPAC343.04c "WD repeat prote... 122 6.1e-09 2
ZFIN|ZDB-GENE-990415-89 - symbol:gnb2l1 "guanine nucleoti... 103 9.6e-09 2
UNIPROTKB|I3LI24 - symbol:GNB2L1 "Guanine nucleotide-bind... 102 9.8e-09 2
TAIR|locus:2012971 - symbol:AT1G71840 "AT1G71840" species... 103 1.0e-08 2
ASPGD|ASPL0000060163 - symbol:AN1385 species:162425 "Emer... 140 1.3e-08 2
UNIPROTKB|A4R7U3 - symbol:CIA1 "Probable cytosolic iron-s... 153 1.4e-08 2
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 128 1.4e-08 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 154 1.6e-08 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 154 2.3e-08 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 154 2.3e-08 1
WARNING: Descriptions of 382 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 195/316 (61%), Positives = 234/316 (74%)
Query: 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
MVS +N VDT HEDMIHDA+MDY G LATCSSD +VK+F++ RN Q LIA
Sbjct: 1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
+L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K YEY HDSSVNS+ W
Sbjct: 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCW 111
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGI--GSLSEL 177
AP ++GLILACGSSDG IS L+Y D WE +KI+ AHTIGCNAVSW P + GSL E
Sbjct: 112 APHDYGLILACGSSDGAISLLSYTGD-GQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQ 170
Query: 178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237
G K + KR SGGCDNL+KIWK+E +W EE KLE HSDWVRDVAWAPS GL
Sbjct: 171 P-SGQKPNYI-KRFASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS 228
Query: 238 MIASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
IASCSQD +V IWT +D +W+P +++ F+DVVW+VSWS+T +IL VS GDN V+LW
Sbjct: 229 TIASCSQDGRVFIWTCDDASGSSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLW 288
Query: 296 KENTDGAWQCITEMGK 311
KE+ DG W CI+++ K
Sbjct: 289 KESVDGLWACISDVNK 304
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 192/315 (60%), Positives = 231/315 (73%)
Query: 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
MVS +N VDT HEDMIHDA+MDY G LATCSSD +VK+F++ RN Q LIA
Sbjct: 1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
+L+GH GPVWQVAWAHP +G +LASCSYDRKVIIWR +NG W K +E+ HDSSVNS+ W
Sbjct: 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCW 111
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
AP ++GLILACGSSDG IS LTY + WE +KI AHTIGCNAVSW P + S +D
Sbjct: 112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
+ KR SGGCDNLIK+WK+E D +W EE KLE HSDWVRDVAWAPS GL
Sbjct: 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230
Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
IASCSQD +V IWT +D TW+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290
Query: 297 ENTDGAWQCITEMGK 311
E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 190/315 (60%), Positives = 231/315 (73%)
Query: 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
MVS +N VDT HEDMIHDA+MDY G LATCSSD +VK+F++ RN Q LIA
Sbjct: 1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
+L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E+ HDSSVNS+ W
Sbjct: 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCW 111
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
AP ++GLILACGSSDG IS LTY + WE +KI AHTIGCNAVSW P + S +D
Sbjct: 112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
+ K+ SGGCDNLIK+WK+E D +W EE KLE HSDWVRDVAWAPS GL
Sbjct: 171 PSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230
Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
IASCSQD +V IWT +D TW+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFIWTCDDTSGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290
Query: 297 ENTDGAWQCITEMGK 311
E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305
>UNIPROTKB|Q3ZCC9 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9913 "Bos
taurus" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0012507 GO:GO:0000776 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0051028 GO:GO:0031080 EMBL:BC102514
IPI:IPI00691005 RefSeq:NP_001069033.1 UniGene:Bt.62595
ProteinModelPortal:Q3ZCC9 SMR:Q3ZCC9 STRING:Q3ZCC9 PRIDE:Q3ZCC9
Ensembl:ENSBTAT00000023702 GeneID:512530 KEGG:bta:512530 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 InParanoid:Q3ZCC9 KO:K14004 OMA:IKLWKEE
OrthoDB:EOG40P471 NextBio:20870435 Uniprot:Q3ZCC9
Length = 322
Score = 1001 (357.4 bits), Expect = 6.2e-101, P = 6.2e-101
Identities = 188/315 (59%), Positives = 231/315 (73%)
Query: 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
MVS +N VDT HEDMIHDA+MDY G LATCSSD +VK+F++ RN Q L+A
Sbjct: 1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILVA 51
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
+L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E+ HDSSVNS+ W
Sbjct: 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCW 111
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
AP ++GLILACGSSDG IS LTY + WE +KI AHTIGCNAVSW P + S +D
Sbjct: 112 APHDYGLILACGSSDGAISLLTY-TGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
+ K+ SGGCDNLIK+WK+E D +W EE KLE HSDWVRDVAWAPS GL
Sbjct: 171 PSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230
Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
IASCSQD +V +WT +D TW+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290
Query: 297 ENTDGAWQCITEMGK 311
E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305
>ZFIN|ZDB-GENE-040426-2649 [details] [associations]
symbol:sec13 "SEC13 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0070971 "endoplasmic reticulum exit site" evidence=IDA]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0070278
"extracellular matrix constituent secretion" evidence=IMP]
[GO:0005622 "intracellular" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2649
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0001889 GO:GO:0051216
GO:GO:0006888 GO:GO:0007029 GO:GO:0055123 GO:GO:0070278
GO:GO:0070971 CTD:6396 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 HOVERGEN:HBG057343 KO:K14004 EMBL:BX537350
EMBL:BC054585 EMBL:BC153483 EMBL:CT027575 IPI:IPI00513236
RefSeq:NP_998500.1 UniGene:Dr.5496 STRING:Q7T2E1
Ensembl:ENSDART00000077063 GeneID:798071 KEGG:dre:798071
InParanoid:Q7T2E1 OMA:ISWAPAT NextBio:20933269 Uniprot:Q7T2E1
Length = 320
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 190/316 (60%), Positives = 230/316 (72%)
Query: 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
MVS +N VDT HEDMIHDA+MDY G LATCSSD +VK+F++ K+ L+A
Sbjct: 1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-----KNGGQ----ILVA 51
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
+L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +N W K YEY HDSSVNS+ W
Sbjct: 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENSTWDKMYEYTGHDSSVNSVCW 111
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGI--GSLSEL 177
P +FGLILACGSSDG IS LT D + W+ +KI AHTIGCNAVSW P + GSL E
Sbjct: 112 GPYDFGLILACGSSDGAISVLTCSGDGH-WDIKKINNAHTIGCNAVSWAPAVVPGSLIEQ 170
Query: 178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237
G K + KR VSGGCDNL+K+WK+E +W E+ KLE HSDWVRDV WAPS GL
Sbjct: 171 PT-GQKPNYI-KRFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTS 228
Query: 238 MIASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
IASCSQD +V IWT +D TWT +++ F+DVVW+VSWS+TG+IL VS GDN V+LW
Sbjct: 229 TIASCSQDGRVFIWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLW 288
Query: 296 KENTDGAWQCITEMGK 311
KE+ DG W CI+++ K
Sbjct: 289 KESVDGQWACISDVNK 304
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 188/315 (59%), Positives = 231/315 (73%)
Query: 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
MVS +N VDT HEDMIHDA+MDY G LATCSSD +VK+F++ RN Q LIA
Sbjct: 1 MVSVMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
+L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E++ HDSSVNS+ W
Sbjct: 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCW 111
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
AP ++GLILACGSSDG IS LTY + WE +KI AHTIGCNAVSW P + S +D
Sbjct: 112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
+ K+ SGGCDNLIK+W++E D +W EE KLE HSDWVRDVAWAPS GL
Sbjct: 171 PSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230
Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
IASCSQD +V IWT +D W+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290
Query: 297 ENTDGAWQCITEMGK 311
E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 188/315 (59%), Positives = 231/315 (73%)
Query: 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
MVS +N VDT HEDMIHDA+MDY G LATCSSD +VK+F++ RN Q LIA
Sbjct: 1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
+L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E++ HDSSVNS+ W
Sbjct: 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCW 111
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
AP ++GLILACGSSDG IS LTY + WE +KI AHTIGCNAVSW P + S +D
Sbjct: 112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
+ K+ SGGCDNLIK+W++E D +W EE KLE HSDWVRDVAWAPS GL
Sbjct: 171 PSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230
Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
IASCSQD +V IWT +D W+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290
Query: 297 ENTDGAWQCITEMGK 311
E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305
>FB|FBgn0024509 [details] [associations]
symbol:Sec13 "Sec13 ortholog (S. cerevisiae)" species:7227
"Drosophila melanogaster" [GO:0006900 "membrane budding"
evidence=ISS] [GO:0008363 "larval chitin-based cuticle development"
evidence=IMP] [GO:0035293 "chitin-based larval cuticle pattern
formation" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0031080 "nuclear pore outer ring"
evidence=ISS] [GO:0007184 "SMAD protein import into nucleus"
evidence=IMP] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0010629 GO:GO:0007184 GO:GO:0035293 EMBL:AF160909
ProteinModelPortal:Q7KLW8 STRING:Q7KLW8 PaxDb:Q7KLW8 PRIDE:Q7KLW8
FlyBase:FBgn0024509 InParanoid:Q7KLW8 OrthoDB:EOG46T1H2
ArrayExpress:Q7KLW8 Bgee:Q7KLW8 Uniprot:Q7KLW8
Length = 386
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 174/306 (56%), Positives = 225/306 (73%)
Query: 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
MVS L +DT HEDM+H A +D+ GL LATCSSD +V++F+ +N K +A
Sbjct: 31 MVSLLQEIDTEHEDMVHHAALDFYGLLLATCSSDGSVRIFHSRKNNKA----------LA 80
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG-NWFKYYEYNNHDSSVNSIA 119
ELKGH GPVWQVAWAHP+FG +LASCSYDRKVI+W+ +W K YEY+NHDSSVNS+
Sbjct: 81 ELKGHQGPVWQVAWAHPKFGNILASCSYDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVD 140
Query: 120 WAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELD 178
+AP E+GL+LAC SSDG++S LT ++ W+++KI AHTIG NA+SW P D
Sbjct: 141 FAPSEYGLVLACASSDGSVSVLTCNTEYGVWDAKKIPNAHTIGVNAISWCPAQAPDPAFD 200
Query: 179 LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
+ + KRLVSGGCDNL+KIW+++ D+W+EE +LE HSDWVRDVAWAPS GL +
Sbjct: 201 QRVTSRSAAVKRLVSGGCDNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWAPSIGLPRSQ 260
Query: 239 IASCSQDRKVIIWTSN-DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297
IA+ SQDR VI+W+SN D WT +++TFDD VW++SWS TG+IL V+ GDN+V+LWKE
Sbjct: 261 IATASQDRHVIVWSSNADLSEWTSTVLHTFDDAVWSISWSTTGNILAVTGGDNNVTLWKE 320
Query: 298 NTDGAW 303
NT+G W
Sbjct: 321 NTEGQW 326
>DICTYBASE|DDB_G0292052 [details] [associations]
symbol:sec13 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0030127 "COPII vesicle coat"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=IEA;ISS]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292052 GenomeReviews:CM000155_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
EMBL:AAFI02000187 GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643
GO:GO:0006888 GO:GO:0051028 GO:GO:0030127 KO:K14004 OMA:IKLWKEE
RefSeq:XP_629794.1 ProteinModelPortal:Q54DS8 SMR:Q54DS8
STRING:Q54DS8 PRIDE:Q54DS8 EnsemblProtists:DDB0235182
GeneID:8628472 KEGG:ddi:DDB_G0292052 ProtClustDB:CLSZ2429468
Uniprot:Q54DS8
Length = 301
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 157/304 (51%), Positives = 209/304 (68%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
VD+GHEDM+HDA+ DY G +LATCSSD +K+F++ ++ H + +L+GH G
Sbjct: 6 VDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGG---ENPQH------LVDLRGHEG 56
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRG-DNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
PVWQVAWAHP+FG +LAS SYDRKVI+W+ N +W ++Y H+ SVNSI+WAP EFG
Sbjct: 57 PVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFG 116
Query: 127 LILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG 185
L LAC SSDG+++ Y + N WE+ +KI IG N+VSW P S ++ + +
Sbjct: 117 LSLACASSDGSVTIHNY--NNNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIP 174
Query: 186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
KR+V+G CDNLIKI+K DKWI + +LE+H DWVRDVAWAP+ GL IASCSQD
Sbjct: 175 APIKRIVTGSCDNLIKIFKNVEDKWILDKQLEDHKDWVRDVAWAPNIGLPYSKIASCSQD 234
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
R VI+WT ++ W+ + FDD+VW VSWS+ G+IL VSCGDN V+LWKE D W+
Sbjct: 235 RSVIVWTQDENGVWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKL 294
Query: 306 ITEM 309
I+ +
Sbjct: 295 ISHV 298
>POMBASE|SPBC215.15 [details] [associations]
symbol:sec13 "COPII-coated vesicle component Sec13"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006999
"nuclear pore organization" evidence=ISO] [GO:0030127 "COPII
vesicle coat" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0071937 "barrier septum assembly involved in cell
cycle cytokinesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC215.15 GO:GO:0005829
GO:GO:0005886 GO:GO:0006886 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0005789 EMBL:CU329671 eggNOG:COG2319 GO:GO:0005643
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0051028 GO:GO:0071937
GO:GO:0030127 GO:GO:0006999 HOGENOM:HOG000216895 KO:K14004
OMA:IKLWKEE OrthoDB:EOG4QNR53 PIR:T39905 RefSeq:NP_596692.1
ProteinModelPortal:O94319 STRING:O94319 PRIDE:O94319
EnsemblFungi:SPBC215.15.1 GeneID:2540716 KEGG:spo:SPBC215.15
NextBio:20801838 Uniprot:O94319
Length = 297
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 154/309 (49%), Positives = 198/309 (64%)
Query: 5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG 64
+ VDT H+DMIHDA +DY G LATCSSD T+KVF+++ N + TL+ L+G
Sbjct: 1 MTTVDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQ---------TLLETLRG 51
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
HSGPVWQ+ WAHP+FGT+LAS SYD VI+WR G W + ++ H +SVN+++WAP E
Sbjct: 52 HSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVSWAPHE 111
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
+G +LAC SSDG +S L + D S ++R AH GCNAV W P SLS + S
Sbjct: 112 YGALLACASSDGKVSVLEFKDD-GSCDTRIFTAHEPGCNAVCWSPP--SLSGSVVGQSPA 168
Query: 185 GGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242
G K+L + GCDNL+KIW + + WI E L H DW RDVAWAPS GL+K +AS
Sbjct: 169 AG-PKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASA 227
Query: 243 SQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
SQD+ V IWT W TP F D+ W VSWSL+G+IL VSCGDN V L+KE+ +
Sbjct: 228 SQDKNVFIWTKEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKESQN 287
Query: 301 GAWQCITEM 309
WQ + E+
Sbjct: 288 -KWQLLNEL 295
>TAIR|locus:2045648 [details] [associations]
symbol:AT2G30050 "AT2G30050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0006900
"membrane budding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:AC004680 EMBL:AC004165 UniGene:At.25577
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:AF412112
EMBL:AY124848 IPI:IPI00529872 PIR:T00593 RefSeq:NP_180566.1
UniGene:At.74333 ProteinModelPortal:O64740 SMR:O64740 IntAct:O64740
STRING:O64740 PaxDb:O64740 PRIDE:O64740 ProMEX:O64740
EnsemblPlants:AT2G30050.1 GeneID:817556 KEGG:ath:AT2G30050
TAIR:At2g30050 InParanoid:O64740 PhylomeDB:O64740
ProtClustDB:CLSN2683847 ArrayExpress:O64740 Genevestigator:O64740
Uniprot:O64740
Length = 302
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 148/305 (48%), Positives = 197/305 (64%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
++TGHED++HD +MDY G +AT SSD T+K+ + N SQ+ +A L GH G
Sbjct: 6 IETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNN-----GGSQQ---LATLTGHRG 57
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFG 126
PVW+VAWAHP++G++LASCSYD +VI+W+ N N W + + + +H SSVNSIAWAP + G
Sbjct: 58 PVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIG 117
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDLKGSKLG 185
L LACGSSDG IS T +D W++ +I AH +G +VSW P + L S L
Sbjct: 118 LSLACGSSDGNISVFTARAD-GGWDTSRIDQAHPVGVTSVSWAPATAPGA---LVSSGLL 173
Query: 186 GVAKRLVSGGCDNLIKIWKQEGDKWIEET--KLENHSDWVRDVAWAPSWGLSKCMIASCS 243
+L SGGCDN +K+WK W + L+ H+DWVRDVAWAP+ GL K IAS S
Sbjct: 174 DPVYKLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGS 233
Query: 244 QDRKVIIWT-SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
QD KVIIWT + W ++ F VW VSWSLTG++L VS G+N+V++WKE DG
Sbjct: 234 QDGKVIIWTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGE 293
Query: 303 WQCIT 307
W+ +T
Sbjct: 294 WEQVT 298
>TAIR|locus:2100267 [details] [associations]
symbol:AT3G01340 "AT3G01340" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006900 "membrane budding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC010676
HOGENOM:HOG000216895 KO:K14004 ProtClustDB:CLSN2683847
EMBL:AF370262 EMBL:AY063079 IPI:IPI00528696 RefSeq:NP_001030616.1
RefSeq:NP_186783.1 UniGene:At.18565 ProteinModelPortal:Q9SRI1
SMR:Q9SRI1 IntAct:Q9SRI1 STRING:Q9SRI1 PRIDE:Q9SRI1 ProMEX:Q9SRI1
DNASU:821216 EnsemblPlants:AT3G01340.1 EnsemblPlants:AT3G01340.2
GeneID:821216 KEGG:ath:AT3G01340 TAIR:At3g01340 InParanoid:Q9SRI1
OMA:KIDQAHP PhylomeDB:Q9SRI1 ArrayExpress:Q9SRI1
Genevestigator:Q9SRI1 Uniprot:Q9SRI1
Length = 302
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 147/307 (47%), Positives = 194/307 (63%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
++TGH D IHD MDY G +AT SSD T+K+ + S+S +A L GH G
Sbjct: 6 IETGHSDTIHDVVMDYYGKRVATASSDCTIKITGV--------SNSGGSQHLATLTGHRG 57
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFG 126
PVWQVAWAHP+FG+LLASCSYD ++I+W+ N N W + + + +H SVNSIAWAP E G
Sbjct: 58 PVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELG 117
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGI--GSLSELDLKGSK 183
L LACG+SDG IS + +D W++ KI AH +G +VSW P G+L +
Sbjct: 118 LSLACGASDGNISVFSARAD-GGWDTTKIDQAHPVGVTSVSWAPATEPGAL----VSSGM 172
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWIEET--KLENHSDWVRDVAWAPSWGLSKCMIAS 241
+ V K L SGGCD+ +K+WK W + L H+DWVRDVAWAP+ GL K IAS
Sbjct: 173 IDPVYK-LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIAS 231
Query: 242 CSQDRKVIIWT-SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
S+D KVIIWT + W ++ F VW VSWSLTG++L VS G+N+V++WKE+ D
Sbjct: 232 GSEDGKVIIWTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVD 291
Query: 301 GAWQCIT 307
G W+ +T
Sbjct: 292 GEWEQVT 298
>ASPGD|ASPL0000075365 [details] [associations]
symbol:sec13 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005643
EMBL:BN001303 GO:GO:0051028 EMBL:AACD01000075 HOGENOM:HOG000216895
KO:K14004 OMA:IKLWKEE RefSeq:XP_661921.1 ProteinModelPortal:Q5B563
SMR:Q5B563 STRING:Q5B563 EnsemblFungi:CADANIAT00006147
GeneID:2872114 KEGG:ani:AN4317.2 OrthoDB:EOG4QNR53 Uniprot:Q5B563
Length = 309
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 153/315 (48%), Positives = 202/315 (64%)
Query: 9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP 68
++GH+DMIHDA +DY G LATCSSD T+K+F ++ D+H L+ LKGH GP
Sbjct: 9 NSGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIE-----GDTHK----LVETLKGHEGP 59
Query: 69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDN---------GNWFKYYEYNNHDSSVNSIA 119
VW V WAHP+FGT+LAS SYD KV+IWR + G W K ++++ H +SVN I+
Sbjct: 60 VWCVEWAHPKFGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMIS 119
Query: 120 WAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
WAP E G +LAC SSDG +S L + NSW + AH +G N++SW P + S L
Sbjct: 120 WAPHETGCLLACASSDGHVSVLEFRD--NSWTHQIFHAHGMGVNSISWAP---AASPGSL 174
Query: 180 KGSKLG-GVAKRLVSGGCDNLIKIWKQEGD-KWIEETK-LENHSDWVRDVAWAPSWGLSK 236
S G G +R V+GG DNL+KIW + K T+ LE HSDWVRDVAW+PS LSK
Sbjct: 175 VSSNPGIGQQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDWVRDVAWSPSI-LSK 233
Query: 237 CMIASCSQDRKVIIWTSN--DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL 294
IAS SQD+ V +WT++ + WT ++ FD+V+W VSWS +G+IL VS GDN VSL
Sbjct: 234 SYIASASQDKTVRVWTADASNPGQWTSQVLE-FDNVLWRVSWSPSGNILAVSGGDNKVSL 292
Query: 295 WKENTDGAWQCITEM 309
WKEN G W+ + ++
Sbjct: 293 WKENLRGQWEKVKDI 307
>CGD|CAL0004667 [details] [associations]
symbol:SEC13 species:5476 "Candida albicans" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0051028 EMBL:AACQ01000027
EMBL:AACQ01000026 KO:K14004 RefSeq:XP_720011.1 RefSeq:XP_720143.1
ProteinModelPortal:Q5AEF2 SMR:Q5AEF2 STRING:Q5AEF2 GeneID:3638207
GeneID:3638425 KEGG:cal:CaO19.316 KEGG:cal:CaO19.7948
Uniprot:Q5AEF2
Length = 298
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 147/309 (47%), Positives = 192/309 (62%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
+ H+D+IHDA +DY G LATCSSD T+K+F+LD D++ LI L GH G
Sbjct: 4 IGNAHDDLIHDAVLDYYGKRLATCSSDKTIKIFDLDGT----DNYK----LITTLTGHEG 55
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRG--DNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
PVWQV+WAHP+FG++LASCSYD K +IW+ + W E+ H +SVNS++WAP E
Sbjct: 56 PVWQVSWAHPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTVHQASVNSVSWAPHEL 115
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKL 184
G +L C SSDG +S + + D + S I AH IG N+ +W P S S D K
Sbjct: 116 GAVLLCTSSDGKVSVVDFNDDGTT--SHVIFDAHAIGANSATWAPV--STSSKDSAALKQ 171
Query: 185 GGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242
+R+VS G DNL KIWK + + ++EE KLE H+DWVRDVAW+PS L + IA+
Sbjct: 172 ---QRRIVSCGSDNLAKIWKYDAANNTYVEEAKLEGHTDWVRDVAWSPS-NLIRSYIATA 227
Query: 243 SQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
SQDR V+IWT + W ++ F DV W SWSL+G+IL VS GDN VSLWKEN
Sbjct: 228 SQDRTVLIWTQDRDGKWQKQLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQ 287
Query: 301 GAWQCITEM 309
G W+ E+
Sbjct: 288 GKWESAGEV 296
>SGD|S000004198 [details] [associations]
symbol:SEC13 "Structural component of 3 distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0031080 "nuclear pore
outer ring" evidence=IDA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IDA;IMP] [GO:0005773 "vacuole" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0043547 "positive regulation of GTPase activity" evidence=IDA]
[GO:0035859 "Seh1-associated complex" evidence=IDA] [GO:0031081
"nuclear pore distribution" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004198 GO:GO:0005774
GO:GO:0045893 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0043547 GO:GO:0005198 GO:GO:0015031 eggNOG:COG2319
EMBL:BK006945 GO:GO:0030433 GO:GO:0051028 EMBL:U14913 GO:GO:0030127
GO:GO:0031080 GO:GO:0031081 GO:GO:0035859 PDB:3IKO PDBsum:3IKO
PDB:3JRO PDBsum:3JRO GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE OrthoDB:EOG4QNR53
EMBL:L05929 PIR:A45442 RefSeq:NP_013309.1 PDB:2PM6 PDB:2PM7
PDB:2PM9 PDB:3JRP PDB:3MZK PDB:3MZL PDBsum:2PM6 PDBsum:2PM7
PDBsum:2PM9 PDBsum:3JRP PDBsum:3MZK PDBsum:3MZL
ProteinModelPortal:Q04491 SMR:Q04491 DIP:DIP-1826N IntAct:Q04491
MINT:MINT-402427 STRING:Q04491 PaxDb:Q04491 PeptideAtlas:Q04491
EnsemblFungi:YLR208W GeneID:850905 KEGG:sce:YLR208W CYGD:YLR208w
EvolutionaryTrace:Q04491 NextBio:967299 Genevestigator:Q04491
GermOnline:YLR208W GO:GO:0090114 Uniprot:Q04491
Length = 297
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 137/303 (45%), Positives = 192/303 (63%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ H ++IHDA +DY G LATCSSD T+K+F ++ ++H LI L GH
Sbjct: 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVE-----GETHK----LIDTLTGHE 53
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
GPVW+V WAHP+FGT+LASCSYD KV+IW+ +NG W + + H +SVNS+ WAP E+G
Sbjct: 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 113
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGG 186
+L SSDG +S + + + + I AH IG N+ SW P + + G+K
Sbjct: 114 PLLLVASSDGKVSVVEF-KENGTTSPIIIDAHAIGVNSASWAPATIE-EDGEHNGTK--- 168
Query: 187 VAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
+++ V+GG DNL+KIWK D ++ E+ LE HSDWVRDVAW+P+ L + +AS SQ
Sbjct: 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYLASVSQ 227
Query: 245 DRKVIIWTS-NDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301
DR IIWT N+ W ++ F DV+W SWSL+G++L +S GDN V+LWKEN +G
Sbjct: 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287
Query: 302 AWQ 304
W+
Sbjct: 288 KWE 290
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 78/275 (28%), Positives = 115/275 (41%)
Query: 7 LVDT--GHEDMIHDAEMDY--LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
L+DT GHE + + + G LA+CS D V ++ +++ SQ IA
Sbjct: 45 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK-----EENGRWSQ----IAVH 95
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKV-IIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
HS V V WA ++G LL S D KV ++ +NG + H VNS +WA
Sbjct: 96 AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII-IDAHAIGVNSASWA 154
Query: 122 P---KEFG--------LILACGSSDGTISFLTYMSDTNSW--ESRKIAAHTIGCNAVSWG 168
P +E G G +D + Y SD ++ ES + H+ V+W
Sbjct: 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWS 213
Query: 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDV 226
P + L S L V++ D IW Q+ ++ W ++T L+ DV
Sbjct: 214 PTV-------LLRSYLASVSQ-------DRTCIIWTQDNEQGPW-KKTLLKEEK--FPDV 256
Query: 227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTP 261
W SW LS ++A D KV +W N W P
Sbjct: 257 LWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 291
>UNIPROTKB|A8XJ40 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6238
"Caenorhabditis briggsae" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643 GO:GO:0000910
GO:GO:0051028 HOGENOM:HOG000216895 EMBL:HE601467
ProteinModelPortal:A8XJ40 STRING:A8XJ40 EnsemblMetazoa:CBG13889
WormBase:CBG13889 Uniprot:A8XJ40
Length = 306
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 130/312 (41%), Positives = 178/312 (57%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
+DT H D IHDA+++ G LATC SD VK+F + N Q LI EL GH+G
Sbjct: 8 IDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPN-------GQSYPLI-ELSGHNG 59
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
PVW+V+WAHP++G LLAS SYD+KVIIW+ NG W K YE+ H++SV S+A+AP +FGL
Sbjct: 60 PVWKVSWAHPKYGGLLASASYDKKVIIWQEVNGRWQKTYEWETHEASVTSVAFAPHQFGL 119
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGG 186
+LA S+DGTI L + + T W+S +I H G N+VSW PG D G K
Sbjct: 120 MLASSSADGTIGILRFDAQTQQWQSSRIQNCHDQGVNSVSWAPGTA-----DPAGKK--- 171
Query: 187 VAKRLVSGGCDNLIKIW--KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
R VS G D L+KIW +E ++W E + H D+VR+ AW P + I SC
Sbjct: 172 ---RFVSAGNDKLVKIWLLNEELNEWTCEKAIHCHKDFVREAAWCPVTNKGQHSIVSCGL 228
Query: 245 DRKVIIWTSNDYVT--WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
D ++++ D T W ++ +++ S+S G L+VS DN ++LW+EN G
Sbjct: 229 DGNLVLYRIADIETAEWKSKLLEQAPCALYHASFSPCGSFLSVSGDDNMITLWRENLQGQ 288
Query: 303 WQCITEMGKTSE 314
W I K E
Sbjct: 289 WIKIPRENKERE 300
>WB|WBGene00003806 [details] [associations]
symbol:npp-20 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0006997 "nucleus
organization" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 124/312 (39%), Positives = 177/312 (56%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
+DT H D IHDA+++ G LATC SD VK+F + N S+ +AEL GHSG
Sbjct: 8 IDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPN---GQSYP-----MAELVGHSG 59
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
PVW+V+WAHP++G LLAS SYD+KVIIW G W K YE+ H++S +A+AP ++GL
Sbjct: 60 PVWKVSWAHPKYGGLLASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAPHQYGL 119
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGG 186
+LA S+DG I L Y + +N W S KI H G N+V W PG +K
Sbjct: 120 MLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSAD------PAAK--- 170
Query: 187 VAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
KRLVS G D +KIW + ++WI E L H+D+VR+ AW P + I SC
Sbjct: 171 --KRLVSAGNDKNVKIWAFDDATNEWILEKTLAGHTDFVREAAWCPVTNNGQHTIVSCGM 228
Query: 245 DRKVIIW-TSN-DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
+ ++++ TSN + W ++ T +++ S+S G L+V+ DN +++W+EN G
Sbjct: 229 EGNLVLFRTSNIETEEWKAKLLETAPCALYHSSFSPCGSFLSVAGDDNVITIWRENLQGQ 288
Query: 303 WQCITEMGKTSE 314
W + K E
Sbjct: 289 WIKVPRDNKERE 300
>UNIPROTKB|Q9N4A7 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051169 "nuclear transport" evidence=IC]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 124/312 (39%), Positives = 177/312 (56%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
+DT H D IHDA+++ G LATC SD VK+F + N S+ +AEL GHSG
Sbjct: 8 IDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPN---GQSYP-----MAELVGHSG 59
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
PVW+V+WAHP++G LLAS SYD+KVIIW G W K YE+ H++S +A+AP ++GL
Sbjct: 60 PVWKVSWAHPKYGGLLASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAPHQYGL 119
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGG 186
+LA S+DG I L Y + +N W S KI H G N+V W PG +K
Sbjct: 120 MLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSAD------PAAK--- 170
Query: 187 VAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
KRLVS G D +KIW + ++WI E L H+D+VR+ AW P + I SC
Sbjct: 171 --KRLVSAGNDKNVKIWAFDDATNEWILEKTLAGHTDFVREAAWCPVTNNGQHTIVSCGM 228
Query: 245 DRKVIIW-TSN-DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
+ ++++ TSN + W ++ T +++ S+S G L+V+ DN +++W+EN G
Sbjct: 229 EGNLVLFRTSNIETEEWKAKLLETAPCALYHSSFSPCGSFLSVAGDDNVITIWRENLQGQ 288
Query: 303 WQCITEMGKTSE 314
W + K E
Sbjct: 289 WIKVPRDNKERE 300
>UNIPROTKB|E3NCB9 [details] [associations]
symbol:Cre-npp-20 "CRE-NPP-20 protein" species:31234
"Caenorhabditis remanei" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005643 GO:GO:0000910 OMA:IKLWKEE EMBL:DS268594
RefSeq:XP_003093969.1 ProteinModelPortal:E3NCB9
EnsemblMetazoa:CRE15709 GeneID:9811680 CTD:9811680 Uniprot:E3NCB9
Length = 311
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 123/312 (39%), Positives = 173/312 (55%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
+DT H D IHDA+++ G LATC SD VK+F + N Q LI EL GH+G
Sbjct: 8 IDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPN-------GQSYPLI-ELSGHNG 59
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
PVW+V+WAHP++G LLAS +YD+KVIIW+ NG W K YE+ H++S S+A+AP ++GL
Sbjct: 60 PVWKVSWAHPKYGGLLASAAYDKKVIIWQEINGRWQKSYEWACHEASTTSVAFAPHQYGL 119
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGG 186
LA S+DG I L Y S T W+S KI H G N+VSW PG +
Sbjct: 120 WLASSSADGDIGILRYDSVTGQWQSSKIQKCHEQGVNSVSWAPGSADPT----------- 168
Query: 187 VAKRLVSGGCDNLIKIW--KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
KRLVS G D KIW +Q W L H+D+VR+ AW P + I SC
Sbjct: 169 AKKRLVSAGNDKCAKIWVFQQTNGFW--RKLLNGHTDFVREAAWCPVTNKGQHSIVSCGL 226
Query: 245 DRKVIIWTSNDYVT--WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
+ ++++ +++ T W ++ +++ S+S G L+VS DN +++W+EN G
Sbjct: 227 EGNLVLYRNSNIETDEWKSKLLEKSPCPLYHASFSPCGSFLSVSGDDNMITIWRENLQGQ 286
Query: 303 WQCITEMGKTSE 314
W + K E
Sbjct: 287 WIKVPRENKERE 298
>UNIPROTKB|F1SQA9 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005635 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00550000075049 EMBL:CU469341
Ensembl:ENSSSCT00000012664 OMA:REISADH Uniprot:F1SQA9
Length = 158
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 101/161 (62%), Positives = 121/161 (75%)
Query: 1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
MVS +N VDT HEDMIHDA+MDY G LATCSSD +VK+F++ RN Q LIA
Sbjct: 1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
+L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E+ HDSSVNS+ W
Sbjct: 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCW 111
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTI 160
AP ++GLILACGSSDG IS LTY + WE +KI AHT+
Sbjct: 112 APHDYGLILACGSSDGAISLLTY-TGLGQWEVKKINNAHTV 151
Score = 126 (49.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 41/119 (34%), Positives = 56/119 (47%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWA-PSWGLSKCMIASCSQDRKV 248
RL + D +KI+ I L H V VAWA P +G ++ASCS DRKV
Sbjct: 27 RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGN---ILASCSYDRKV 83
Query: 249 IIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCG--DNSVSLWKENTDGAWQ 304
IIW + TW +T D V +V W+ L ++CG D ++SL G W+
Sbjct: 84 IIWKEENG-TWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWE 141
>DICTYBASE|DDB_G0277257 [details] [associations]
symbol:DDB_G0277257 "Nucleoporin SEH1" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277257 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000019 KO:K14299 RefSeq:XP_642765.1
ProteinModelPortal:Q86K39 STRING:Q86K39 EnsemblProtists:DDB0169145
GeneID:8620954 KEGG:ddi:DDB_G0277257 InParanoid:Q86K39 OMA:TELEDHI
Uniprot:Q86K39
Length = 467
Score = 305 (112.4 bits), Expect = 1.9e-43, Sum P(2) = 1.9e-43
Identities = 71/170 (41%), Positives = 94/170 (55%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
+ T H+D+IHD D+ G LATCSSD +KV+ D + +QK L AE K HSG
Sbjct: 7 LSTAHDDLIHDVSYDFYGKRLATCSSDQKIKVW--------DQNDNQKWELSAEWKAHSG 58
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWR-GDNGNWFKYYEYNNH--DS--SVNSIAWAP 122
VW++AWAHP++G ++ASCS+DR V IW ++ K ++ H DS SV I +AP
Sbjct: 59 SVWKLAWAHPEYGQVIASCSFDRTVCIWEESEDEKGQKKWQLKAHLVDSRDSVTDIKFAP 118
Query: 123 KEFGLILACGSSDGTISFLTYMSDTN--SWES-RKIAAHTIGCNAVSWGP 169
K FGL LA SSDG I M N W + + N +SW P
Sbjct: 119 KSFGLRLATCSSDGYIRIYEAMDIMNLSQWTIVEEFESQKGTSNCISWNP 168
Score = 174 (66.3 bits), Expect = 1.9e-43, Sum P(2) = 1.9e-43
Identities = 51/151 (33%), Positives = 77/151 (50%)
Query: 163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI-EETKLENHSD 221
N++ G IGSL+ ++ G+ GG+ + G ++ I + G+ I ++ SD
Sbjct: 306 NSIGNG-NIGSLN--NISGNS-GGLNSNSLMSGANSSINV--SSGNNSIYSNNNFDSSSD 359
Query: 222 W----VRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SNDYVTWT-PFIMNTFD--DVVWN 273
+ DV WAP+ G S +IA+ S+D KV IW S+D +M D VW
Sbjct: 360 GGSRAIHDVCWAPNMGRSYHLIATASKDHKVRIWKLSSDKSKMELKEVMRKDDHKSEVWR 419
Query: 274 VSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304
V W++TG IL S D +V LWK N +G W+
Sbjct: 420 VEWNITGTILASSGDDGNVCLWKCNMNGEWK 450
Score = 129 (50.5 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 49/179 (27%), Positives = 76/179 (42%)
Query: 19 AEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ 78
A +Y G +A+CS D TV ++ +D+ +K L A L V + +A
Sbjct: 66 AHPEY-GQVIASCSFDRTVCIWEES----EDEKGQKKWQLKAHLVDSRDSVTDIKFAPKS 120
Query: 79 FGTLLASCSYDRKVIIWRG-DNGN---WFKYYEYNNHDSSVNSIAWAPKEFGL-ILACGS 133
FG LA+CS D + I+ D N W E+ + + N I+W P + ++A GS
Sbjct: 121 FGLRLATCSSDGYIRIYEAMDIMNLSQWTIVEEFESQKGTSNCISWNPSSYDKPMIAVGS 180
Query: 134 SDGTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSW----GPGIGSLSELDLKGSKLGGV 187
++ I Y W + + A+ IG S G GIG + G GG+
Sbjct: 181 NEPYIKIWEYSETARKWLQIDTLTAYPIGSTISSSNLNSGGGIGGGIGSGIGGGIGGGI 239
Score = 115 (45.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 28/69 (40%), Positives = 38/69 (55%)
Query: 189 KRLVSGGCDNLIKIWKQ-EGDKWIEETKLENHSDWVRDVAWA-PSWGLSKCMIASCSQDR 246
KRL + D IK+W Q + KW + + HS V +AWA P +G +IASCS DR
Sbjct: 25 KRLATCSSDQKIKVWDQNDNQKWELSAEWKAHSGSVWKLAWAHPEYGQ---VIASCSFDR 81
Query: 247 KVIIWTSND 255
V IW ++
Sbjct: 82 TVCIWEESE 90
Score = 89 (36.4 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY 256
D+ ++IWK DK E K D + W W ++ ++AS D V +W N
Sbjct: 387 DHKVRIWKLSSDKSKMELKEVMRKDDHKSEVWRVEWNITGTILASSGDDGNVCLWKCNMN 446
Query: 257 VTWTPF 262
W F
Sbjct: 447 GEWKLF 452
Score = 52 (23.4 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 11/68 (16%), Positives = 34/68 (50%)
Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
I+++N++ + + DV W + + ++ + D+ V +WK ++D + + E+
Sbjct: 348 IYSNNNFDSSSDGGSRAIHDVCWAPNMGRSYHLIATASKDHKVRIWKLSSDKSKMELKEV 407
Query: 310 GKTSEQRA 317
+ + ++
Sbjct: 408 MRKDDHKS 415
>SGD|S000003068 [details] [associations]
symbol:SEH1 "Component of two distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0005773 "vacuole"
evidence=IEA] [GO:0035859 "Seh1-associated complex" evidence=IDA]
[GO:0031080 "nuclear pore outer ring" evidence=IDA] [GO:0017056
"structural constituent of nuclear pore" evidence=IC] [GO:0005643
"nuclear pore" evidence=IEA;IDA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0005774 "vacuolar membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000003068 GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BK006941
GO:GO:0015031 eggNOG:COG2319 GO:GO:0006913 GO:GO:0000329
GO:GO:0051028 TCDB:9.A.14.1.1 GO:GO:0031080 GO:GO:0035859
GO:GO:0017056 PDB:3EWE PDB:3F3F PDB:3F3G PDB:3F3P PDBsum:3EWE
PDBsum:3F3F PDBsum:3F3G PDBsum:3F3P KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
OrthoDB:EOG418FX3 EMBL:X90994 EMBL:Z72622 EMBL:AY558497 PIR:S62137
RefSeq:NP_011415.1 ProteinModelPortal:P53011 SMR:P53011
DIP:DIP-4193N IntAct:P53011 MINT:MINT-547303 STRING:P53011
PaxDb:P53011 PeptideAtlas:P53011 EnsemblFungi:YGL100W GeneID:852778
KEGG:sce:YGL100W CYGD:YGL100w EvolutionaryTrace:P53011
NextBio:972254 Genevestigator:P53011 GermOnline:YGL100W
Uniprot:P53011
Length = 349
Score = 278 (102.9 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 76/252 (30%), Positives = 119/252 (47%)
Query: 9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP 68
D+GH+D++HD D+ G ++ATCSSD +KVF LD KD S+ + L + H
Sbjct: 5 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLD----KDTSNWE---LSDSWRAHDSS 57
Query: 69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGD------NGN-WFKYYEYNNHDSSVNSIAWA 121
+ + WA P++G ++AS SYD+ V +W D +G W K N+ S+ S+ +A
Sbjct: 58 IVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFA 117
Query: 122 PKEFGLILACGSSDGTISFLTYM--SDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
P GL LAC +DG + + SD SW T +S P S+ L
Sbjct: 118 PAHLGLKLACLGNDGILRLYDALEPSDLRSWTL------TSEMKVLSIPPANHLQSDFCL 171
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
++L + I + + K KL H +R ++WAPS G +I
Sbjct: 172 SWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI 231
Query: 240 ASCSQDRKVIIW 251
A+ +D ++ I+
Sbjct: 232 ATGCKDGRIRIF 243
Score = 93 (37.8 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 271 VWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQ 315
VW+VSW+LTG IL+ + D V LWK ++C++ + T++Q
Sbjct: 307 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVI--TAQQ 349
>UNIPROTKB|B3GEK9 [details] [associations]
symbol:npp-20 "Nuclear pore complex protein 20"
species:135651 "Caenorhabditis brenneri" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0005643
GO:GO:0000910 EMBL:EU692928 ProteinModelPortal:B3GEK9 STRING:B3GEK9
Uniprot:B3GEK9
Length = 209
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 74/216 (34%), Positives = 112/216 (51%)
Query: 104 KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGC 162
K YE+ H++S +A+AP ++GL+LA S+DG I L Y + T W+S KI H G
Sbjct: 2 KSYEWEAHEASTTCVAFAPHQYGLMLASSSADGDIGILRYDTVTGQWQSSKIQKCHEQGV 61
Query: 163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW--KQEGDKWIEETKLENHS 220
N+VSW PG LS KRLVS G DN +KIW ++W E L H+
Sbjct: 62 NSVSWAPGTADLS-----------AKKRLVSAGNDNKVKIWLLNDTTNEWTCEKVLSGHT 110
Query: 221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT--WTPFIMNTFDDVVWNVSWSL 278
D+VR+ +W P + I SC D ++++ + + T W ++ +++ S+S
Sbjct: 111 DYVREASWCPVTNKGQHSIVSCGIDGNLVLFRTANIETDEWKSKLLEKAPCPLYHASFSP 170
Query: 279 TGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 314
G L+VS DN +++W+EN G W + K E
Sbjct: 171 CGSFLSVSGDDNMITIWRENLQGQWIKVPRENKERE 206
Score = 127 (49.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN--GNWFKYYEYNNHDSSVNSI 118
E + H VA+A Q+G +LAS S D + I R D G W H+ VNS+
Sbjct: 5 EWEAHEASTTCVAFAPHQYGLMLASSSADGDIGILRYDTVTGQWQSSKIQKCHEQGVNSV 64
Query: 119 AWAPKEFGLI----LACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGP 169
+WAP L L +D + TN W K+ + HT SW P
Sbjct: 65 SWAPGTADLSAKKRLVSAGNDNKVKIWLLNDTTNEWTCEKVLSGHTDYVREASWCP 120
>CGD|CAL0005451 [details] [associations]
symbol:orf19.2186 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031080 "nuclear pore
outer ring" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005451 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K14299
RefSeq:XP_715969.1 RefSeq:XP_716027.1 ProteinModelPortal:Q5A2S9
STRING:Q5A2S9 GeneID:3642290 GeneID:3642391 KEGG:cal:CaO19.2186
KEGG:cal:CaO19.9732 Uniprot:Q5A2S9
Length = 347
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 94/320 (29%), Positives = 148/320 (46%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGHE++IHD + D+ G ++AT SSD +KVF+LD S + L K H +
Sbjct: 16 TGHEELIHDIKYDFYGKHIATVSSDQHIKVFDLD-------SATSSWILNDSWKAHDSSI 68
Query: 70 WQVAWAHPQFGT--LLASCSYDRKVIIWR-------GDNGNWFKYYEYNNHD-SSVNSIA 119
+++WAHP+F + ++ASCSYDR V IW+ G W K + +
Sbjct: 69 AKISWAHPEFSSSKIIASCSYDRTVKIWQEQPDEMPGSGRRWLKLATLATESYGPIYDVC 128
Query: 120 WAPKEFGLILACGSSDGTISFLTYM--SDTNSWE-SRKIAA--HTIGCNAVSWGPGIGSL 174
+AP G L C SDG + +D +W + +IA ++ ++ G+
Sbjct: 129 FAPNHLGFKLGCVGSDGIFRIYESLEPNDLTAWVLTTEIAILNSSLPAKSLQSSFGVEWC 188
Query: 175 SELDLKGSKLGGVA--KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW 232
K K VA + V G + DK+++ L H+ +R V+WAPS
Sbjct: 189 PSKFTKTEKFIVVALDQGFVYGSVQKESSGEESASDKYVKICDLPEHNGLIRSVSWAPSM 248
Query: 233 GLSKCMIASCSQDRKVIIWTSN-----DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
G +IA+ +D V I+ + D T +N VW VSW++TG IL+ +
Sbjct: 249 GRKYHLIATGCKDGFVRIFKATEQENGDLKIETLAKLNDHKSEVWRVSWNMTGTILSSAG 308
Query: 288 GDNSVSLWKENTDGAWQCIT 307
D + LWK + W+C++
Sbjct: 309 DDGKLRLWKCSYLNEWKCMS 328
>FB|FBgn0033247 [details] [associations]
symbol:Nup44A "Nucleoporin at 44A" species:7227 "Drosophila
melanogaster" [GO:0005643 "nuclear pore" evidence=ISS] [GO:0017056
"structural constituent of nuclear pore" evidence=ISS] [GO:0007184
"SMAD protein import into nucleus" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0051445 "regulation of meiotic cell
cycle" evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0043234 "protein complex" evidence=IPI]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0007346
GO:GO:0005635 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048477
GO:GO:0051445 KO:K14299 GeneTree:ENSGT00550000074999 OMA:YEAPDIM
EMBL:AY060480 RefSeq:NP_610343.1 RefSeq:NP_724637.1
RefSeq:NP_724638.1 UniGene:Dm.3965 SMR:Q7K2X8 IntAct:Q7K2X8
STRING:Q7K2X8 EnsemblMetazoa:FBtr0088860 EnsemblMetazoa:FBtr0088861
EnsemblMetazoa:FBtr0088862 GeneID:35762 KEGG:dme:Dmel_CG8722
UCSC:CG8722-RA CTD:35762 FlyBase:FBgn0033247 InParanoid:Q7K2X8
OrthoDB:EOG42V6XT GenomeRNAi:35762 NextBio:795094 Uniprot:Q7K2X8
Length = 354
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 89/314 (28%), Positives = 154/314 (49%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD DY G +ATCSSD TVK++ D+ K + + K HSG +W+
Sbjct: 11 HKDVIHDVVFDYYGRRMATCSSDQTVKIW--------DEDGQGKWNVTSSWKAHSGSIWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN--------WFKYYEYNNHDSSVNSIAW 120
V+WAHP+FG ++A+CS+DR +W G+ + W + + +SV + +
Sbjct: 63 VSWAHPEFGQVVATCSFDRTASVWEEVIGEKVSSTNTPTRRWVRRTTLVDSRTSVTDVEF 122
Query: 121 APKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELD 178
APK GL+LA S+DG I + + + W + ++ + + +SW +++L
Sbjct: 123 APKYLGLLLATASADGIIRIYEAPDIMNLSQWPVQHEISNKLPLSCLSWNTSTYMVTQLL 182
Query: 179 LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
GS V + + + K ++ + + +D V DVA+AP+ G + M
Sbjct: 183 AAGSDEAATPTGKV------FLFAYSENSRKCVKIDTVNDITDPVTDVAFAPNAGRTFHM 236
Query: 239 IASCSQDRKVI-IWTSNDYVTWTPFIMNT--FDD---VVWNVSWSLTGDILTVSCGDNS- 291
+A S+D ++ + D + + T F + VW V W++ +L +S GD+
Sbjct: 237 LAVASKDLYIVNLRGVTDATDISKLDIQTIKFSEHNCPVWRVCWNMLATML-ISTGDDGC 295
Query: 292 VSLWKENTDGAWQC 305
V LW+ N + W+C
Sbjct: 296 VRLWRMNYNRQWRC 309
>UNIPROTKB|Q5A2S9 [details] [associations]
symbol:SEH1 "Putative uncharacterized protein SEH1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005451 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K14299
RefSeq:XP_715969.1 RefSeq:XP_716027.1 ProteinModelPortal:Q5A2S9
STRING:Q5A2S9 GeneID:3642290 GeneID:3642391 KEGG:cal:CaO19.2186
KEGG:cal:CaO19.9732 Uniprot:Q5A2S9
Length = 347
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 94/320 (29%), Positives = 148/320 (46%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGHE++IHD + D+ G ++AT SSD +KVF+LD S + L K H +
Sbjct: 16 TGHEELIHDIKYDFYGKHIATVSSDQHIKVFDLD-------SATSSWILNDSWKAHDSSI 68
Query: 70 WQVAWAHPQFGT--LLASCSYDRKVIIWR-------GDNGNWFKYYEYNNHD-SSVNSIA 119
+++WAHP+F + ++ASCSYDR V IW+ G W K + +
Sbjct: 69 AKISWAHPEFSSSKIIASCSYDRTVKIWQEQPDEMPGSGRRWLKLATLATESYGPIYDVC 128
Query: 120 WAPKEFGLILACGSSDGTISFLTYM--SDTNSWE-SRKIAA--HTIGCNAVSWGPGIGSL 174
+AP G L C SDG + +D +W + +IA ++ ++ G+
Sbjct: 129 FAPNHLGFKLGCVGSDGIFRIYESLEPNDLTAWVLTTEIAILNSSLPAKSLQSSFGVEWC 188
Query: 175 SELDLKGSKLGGVA--KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW 232
K K VA + V G + DK+++ L H+ +R V+WAPS
Sbjct: 189 PSKFTKTEKFIVVALDQGFVYGSVQKESSGEESASDKYVKICDLPEHNGLIRSVSWAPSM 248
Query: 233 GLSKCMIASCSQDRKVIIWTSN-----DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
G +IA+ +D V I+ + D T +N VW VSW++TG IL+ +
Sbjct: 249 GRKYHLIATGCKDGFVRIFKATEQENGDLKIETLAKLNDHKSEVWRVSWNMTGTILSSAG 308
Query: 288 GDNSVSLWKENTDGAWQCIT 307
D + LWK + W+C++
Sbjct: 309 DDGKLRLWKCSYLNEWKCMS 328
>POMBASE|SPAC15F9.02 [details] [associations]
symbol:seh1 "nucleoporin Seh1" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006407 "rRNA export from nucleus" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0031080 "nuclear pore outer
ring" evidence=IDA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC15F9.02 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 eggNOG:COG2319
GO:GO:0051028 GO:GO:0031080 GO:GO:0006407 KO:K14299
HOGENOM:HOG000216896 OMA:YEAPDIM PIR:T37727 RefSeq:NP_593751.1
ProteinModelPortal:Q10099 IntAct:Q10099 STRING:Q10099
EnsemblFungi:SPAC15F9.02.1 GeneID:2541682 KEGG:spo:SPAC15F9.02
OrthoDB:EOG418FX3 NextBio:20802775 Uniprot:Q10099
Length = 339
Score = 264 (98.0 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 74/252 (29%), Positives = 123/252 (48%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
+ T H+D+++D D+ G + +CS+D VKV++ + DD+ + + +E +
Sbjct: 9 IQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFN-----DDTETW--AITSEWRAGDA 61
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-----WFKYYEYNNHDSSVNSIAWAP 122
+ +VAWAHP FG +LA CS DR V I+ N W + + + S+V I++ P
Sbjct: 62 SLMRVAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCP 121
Query: 123 KEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS 182
+ G LA S+D T+ M N + T+ N ++ P S +E
Sbjct: 122 FQHGCKLAAVSADATLRIYEAMEPGN------LTYWTL-MNEIALMPSPPSRNEQPAFCV 174
Query: 183 KL--GGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
++ ++ GC N I+KQ KW + +L H+D +RD+ WAPS G S +I
Sbjct: 175 NWCPSRWREQYIAVGCMNDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYYLI 234
Query: 240 ASCSQDRKVIIW 251
A+ +D V I+
Sbjct: 235 ATACKDGNVRIF 246
Score = 90 (36.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 47/231 (20%), Positives = 89/231 (38%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA CS D V+++ +K + S+ +A+L V +++ Q G LA
Sbjct: 74 GQVLAVCSLDRGVRIYEE----QKKNFESKTWVEVAKLMDARSAVLDISFCPFQHGCKLA 129
Query: 85 SCSYDRKVIIWRG-DNGN---WFKYYEY-------NNHDSSVNSIAWAPKEFG-LILACG 132
+ S D + I+ + GN W E + ++ + W P + +A G
Sbjct: 130 AVSADATLRIYEAMEPGNLTYWTLMNEIALMPSPPSRNEQPAFCVNWCPSRWREQYIAVG 189
Query: 133 SSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL 191
+ +++ + W+ ++ HT + W P +GS L K G V
Sbjct: 190 CMND--AYIYKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYYLIATACKDGNVRIFK 247
Query: 192 VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242
V C+ + + + G+ E++ +S V + + KC + C
Sbjct: 248 VETLCEEVFQEEEDAGNSMTEDSNFNLNSLKVELIG---EYDNHKCQVWRC 295
Score = 72 (30.4 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 271 VWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
VW +++TG IL+ S D V LWK + ++CI+
Sbjct: 292 VWRCRFNVTGTILSSSGDDGCVRLWKASYANLFKCIS 328
>UNIPROTKB|Q5U4Y8 [details] [associations]
symbol:seh1l "Nucleoporin seh1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0007080 "mitotic metaphase plate congression"
evidence=ISS] [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0051315 "attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid segregation" evidence=ISS]
[GO:0000776 "kinetochore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051028 GO:GO:0051315
GO:GO:0000777 GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 CTD:81929
KO:K14299 GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896
OMA:YEAPDIM OrthoDB:EOG4DJJWR EMBL:CR855721 EMBL:BC084902
RefSeq:NP_001011152.1 UniGene:Str.2999 ProteinModelPortal:Q5U4Y8
STRING:Q5U4Y8 Ensembl:ENSXETT00000055056 GeneID:496570
KEGG:xtr:496570 Xenbase:XB-GENE-1015661 InParanoid:Q5U4Y8
Bgee:Q5U4Y8 Uniprot:Q5U4Y8
Length = 360
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 80/251 (31%), Positives = 128/251 (50%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD D+ G +ATCSSD +VKV++ N D H A K HSG VW+
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSEN---GDWHCT-----ASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
PK GL+LA S+DG + + + + W + + + C+ +SW P S S
Sbjct: 123 PKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNP---SSSRAH- 178
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKLENHSDWVRDVAWAPSWGLSKC 237
S + V S ++I++ + K+ + L + SD V D+A+AP+ G S
Sbjct: 179 --SPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFH 236
Query: 238 MIASCSQDRKV 248
++A ++D ++
Sbjct: 237 ILAVATKDVRI 247
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 59/259 (22%), Positives = 108/259 (41%)
Query: 25 GLYLATCSSDHTVKVFNL---DRNLK-KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
G LA+CS D T V+ + N K + SH K T + + + V V +A G
Sbjct: 71 GQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTS---VTDVKFAPKHMG 127
Query: 81 TLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS 133
+LA+CS D V I+ + W +E + S + I+W P + ++A GS
Sbjct: 128 LMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCK-LSCSCISWNPSSSRAHSPMIAVGS 186
Query: 134 SD------GTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIG------SLSELDLK 180
D G + Y +T + ++ + + + + +++ P +G +++ D++
Sbjct: 187 DDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFHILAVATKDVR 246
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240
+ + K L S G +I + +NH+ V W SW ++ ++A
Sbjct: 247 IFTMKPLRKELSSSGGVTKFEIHTV--------AQFDNHNSQV----WRVSWNITGTVLA 294
Query: 241 SCSQDRKVIIWTSNDYVTW 259
S D V +W +N W
Sbjct: 295 SSGDDGTVRLWKANYMDNW 313
>UNIPROTKB|Q6GNF1 [details] [associations]
symbol:seh1l-b "Nucleoporin seh1-B" species:8355 "Xenopus
laevis" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BC073561 RefSeq:NP_001085936.1
UniGene:Xl.3340 ProteinModelPortal:Q6GNF1 GeneID:444365
KEGG:xla:444365 Uniprot:Q6GNF1
Length = 360
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 79/251 (31%), Positives = 129/251 (51%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD D+ G +ATCSSD +VKV++ N+ + H A K HSG VW+
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENV---NWHCT-----ASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
PK GL+LA S+DG + + + + W + + + C+ +SW P S S
Sbjct: 123 PKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNP---SSSRAH- 178
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKLENHSDWVRDVAWAPSWGLSKC 237
S + V S ++I++ + K+ + L + SD V D+A+AP+ G S
Sbjct: 179 --SPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFH 236
Query: 238 MIASCSQDRKV 248
++A ++D ++
Sbjct: 237 ILAVATKDVRI 247
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 60/259 (23%), Positives = 109/259 (42%)
Query: 25 GLYLATCSSDHTVKVFNL---DRNLK-KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
G LA+CS D T V+ + N K + SH K T + + + V V +A G
Sbjct: 71 GQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTS---VTDVKFAPKHMG 127
Query: 81 TLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS 133
+LA+CS D V I+ + W +E + S + I+W P + ++A GS
Sbjct: 128 LMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCK-LSCSCISWNPSSSRAHSPMIAVGS 186
Query: 134 SD------GTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIG------SLSELDLK 180
D G + Y +T + ++ + + + + +++ P +G +++ D++
Sbjct: 187 DDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFHILAVATKDVR 246
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240
+ + K L S G + K E + +NH+ V W SW ++ ++A
Sbjct: 247 IFTMKPLRKELSSSG-----GVTKFENHT---VAQFDNHNSQV----WRVSWNITGTVLA 294
Query: 241 SCSQDRKVIIWTSNDYVTW 259
S D V +W +N W
Sbjct: 295 SSGDDGTVRLWKANYMDNW 313
>ZFIN|ZDB-GENE-030131-6689 [details] [associations]
symbol:seh1l "SEH1-like (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0051315 "attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid segregation" evidence=ISS]
[GO:0000776 "kinetochore" evidence=IEA;ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0031080 "nuclear
pore outer ring" evidence=ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-6689 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0051028 GO:GO:0051315 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 EMBL:BX294130 CTD:81929
KO:K14299 eggNOG:NOG257251 GeneTree:ENSGT00550000074999
HOGENOM:HOG000216896 EMBL:AY398414 IPI:IPI00499010
RefSeq:NP_956217.2 UniGene:Dr.20191 ProteinModelPortal:Q6TGU2
STRING:Q6TGU2 Ensembl:ENSDART00000013865 GeneID:334749
KEGG:dre:334749 InParanoid:Q6TGU2 NextBio:20810534
ArrayExpress:Q6TGU2 Bgee:Q6TGU2 Uniprot:Q6TGU2
Length = 364
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 78/251 (31%), Positives = 126/251 (50%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD D+ G +ATCSSD +VKV++ K DD A K HSG VW+
Sbjct: 11 HKDLIHDVSYDFHGRRMATCSSDQSVKVWD-----KGDDGEWH---CTASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
PK GL+L S+DG + + + + W + + + C+ +SW P S S
Sbjct: 123 PKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLACSCISWNP---SSSRAHP 179
Query: 180 KGSKLGGVAKRLVSGGCDNLIKI--WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237
+GG +G ++I + + K+ + L +D V D+A+AP+ G S
Sbjct: 180 PMIAVGGDDS---NGAYSGKVQIHEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFH 236
Query: 238 MIASCSQDRKV 248
++A ++D ++
Sbjct: 237 VLAIATKDVRI 247
>UNIPROTKB|Q4FZW5 [details] [associations]
symbol:seh1l-a "Nucleoporin seh1-A" species:8355 "Xenopus
laevis" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BC099027 RefSeq:NP_001089593.1
UniGene:Xl.47439 ProteinModelPortal:Q4FZW5 GeneID:734650
KEGG:xla:734650 CTD:81929 Xenbase:XB-GENE-1015667 KO:K14299
Uniprot:Q4FZW5
Length = 360
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 79/251 (31%), Positives = 127/251 (50%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD D+ G +ATCSSD +VKV+ D S + A K HSG VW+
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVW--------DKSENGNWHCTASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
PK GL+LA S+DG + + + + W + + + C+ +SW P S S
Sbjct: 123 PKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNP---SSSRAH- 178
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKLENHSDWVRDVAWAPSWGLSKC 237
S + V S ++I++ + K+ + L + SD V D+A+AP+ G S
Sbjct: 179 --SPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFH 236
Query: 238 MIASCSQDRKV 248
++A ++D ++
Sbjct: 237 ILAVATKDVRI 247
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 59/259 (22%), Positives = 108/259 (41%)
Query: 25 GLYLATCSSDHTVKVFNL---DRNLK-KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
G LA+CS D T V+ + N K + SH K T + + + V V +A G
Sbjct: 71 GQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTS---VTDVKFAPKHMG 127
Query: 81 TLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS 133
+LA+CS D V I+ + W +E + S + I+W P + ++A GS
Sbjct: 128 LMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCK-LSCSCISWNPSSSRAHSPMIAVGS 186
Query: 134 SD------GTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIG------SLSELDLK 180
D G + Y +T + ++ + + + + +++ P +G +++ D++
Sbjct: 187 DDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFHILAVATKDVR 246
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240
+ + K L S G +I + +NH+ V W SW ++ ++A
Sbjct: 247 IFTMKPLRKELSSSGGVTKFEIHTV--------AQFDNHNSQV----WRVSWNITGTVLA 294
Query: 241 SCSQDRKVIIWTSNDYVTW 259
S D V +W +N W
Sbjct: 295 SSGDDGTVRLWKANYMDNW 313
>UNIPROTKB|C1BK83 [details] [associations]
symbol:seh1l "Nucleoporin seh1" species:8014 "Osmerus
mordax" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BT075012 ProteinModelPortal:C1BK83
Uniprot:C1BK83
Length = 364
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 79/250 (31%), Positives = 125/250 (50%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD D+ G +ATCSSD +VKV++ K D+ T A K HSG VW+
Sbjct: 11 HKDLIHDVSYDFHGRRMATCSSDQSVKVWD------KSDNGEWNCT--ASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSL-SELD 178
PK GL+L S+DG + + + + W + + + C+ +SW P S +
Sbjct: 123 PKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMI 182
Query: 179 LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
GS A SG I + + K+ + L +D V D+A+AP+ G S +
Sbjct: 183 AVGSDDSNTA---YSGKVQ--IYEYVENTRKYAKVETLMTVTDPVHDIAFAPNLGRSFHV 237
Query: 239 IASCSQDRKV 248
+A ++D ++
Sbjct: 238 LAIATKDVRI 247
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 60/259 (23%), Positives = 103/259 (39%)
Query: 25 GLYLATCSSDHTVKVFNL---DRNLKKDD-SHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
G LA+CS D T V+ + N K+ SH K T + + + V V +A G
Sbjct: 71 GQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTS---VTDVKFAPKHMG 127
Query: 81 TLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS 133
+L +CS D V I+ + W +E + S + I+W P + ++A GS
Sbjct: 128 LMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCK-LSCSCISWNPSSSRAHSPMIAVGS 186
Query: 134 SD------GTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGIG------SLSELDLK 180
D G + Y+ +T + + T + +++ P +G +++ D++
Sbjct: 187 DDSNTAYSGKVQIYEYVENTRKYAKVETLMTVTDPVHDIAFAPNLGRSFHVLAIATKDVR 246
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240
KL + K S G L E +L+ D W SW ++ ++A
Sbjct: 247 IFKLIPMRKESSSSGPTKL-------------EVQLQAQFDGHNSQVWRVSWNITSTLLA 293
Query: 241 SCSQDRKVIIWTSNDYVTW 259
S D V +W +N W
Sbjct: 294 SSGDDGCVRLWKANYMDNW 312
>UNIPROTKB|Q96EE3 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9606 "Homo sapiens"
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=IMP] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IMP] [GO:0007080 "mitotic metaphase
plate congression" evidence=IMP] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0044281 GO:GO:0015031
GO:GO:0005975 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0019221 GO:GO:0015758 GO:GO:0010827 GO:GO:0055085
GO:GO:0051028 GO:GO:0051315 GO:GO:0000236 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 OMA:YEAPDIM EMBL:AF255625 EMBL:AF431970
EMBL:AF514996 EMBL:AF136976 EMBL:AK056940 EMBL:AK291226
EMBL:BC012430 IPI:IPI00185533 IPI:IPI00220609 RefSeq:NP_001013455.1
RefSeq:NP_112493.2 UniGene:Hs.301048 ProteinModelPortal:Q96EE3
SMR:Q96EE3 IntAct:Q96EE3 STRING:Q96EE3 DMDM:257051064 PaxDb:Q96EE3
PRIDE:Q96EE3 DNASU:81929 Ensembl:ENST00000262124
Ensembl:ENST00000399892 GeneID:81929 KEGG:hsa:81929 UCSC:uc002krq.3
UCSC:uc002krr.3 GeneCards:GC18P012947 HGNC:HGNC:30379 HPA:HPA039964
MIM:609263 neXtProt:NX_Q96EE3 PharmGKB:PA134912135
InParanoid:Q96EE3 OrthoDB:EOG4DJJWR PhylomeDB:Q96EE3 ChiTaRS:SEH1L
GenomeRNAi:81929 NextBio:72265 Bgee:Q96EE3 CleanEx:HS_SEH1L
Genevestigator:Q96EE3 GermOnline:ENSG00000085415 Uniprot:Q96EE3
Length = 360
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 79/251 (31%), Positives = 126/251 (50%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD D+ G +ATCSSD +VKV+ D S S A K HSG VW+
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVW--------DKSESGDWHCTASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
PK GL+LA S+DG + + + + W + + + C+ +SW P S S
Sbjct: 123 PKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNP---SSSRAH- 178
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKLENHSDWVRDVAWAPSWGLSKC 237
S + V S ++I++ + K+ + L +D V D+A+AP+ G S
Sbjct: 179 --SPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFH 236
Query: 238 MIASCSQDRKV 248
++A ++D ++
Sbjct: 237 ILAIATKDVRI 247
Score = 122 (48.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 61/259 (23%), Positives = 107/259 (41%)
Query: 25 GLYLATCSSDHTVKVFNL---DRNLK-KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
G LA+CS D T V+ + N K + SH K T + + + V V +A G
Sbjct: 71 GQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTS---VTDVKFAPKHMG 127
Query: 81 TLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS 133
+LA+CS D V I+ + W +E + S + I+W P + ++A GS
Sbjct: 128 LMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCK-LSCSCISWNPSSSRAHSPMIAVGS 186
Query: 134 SDGT------ISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIG------SLSELDLK 180
D + + Y +T + ++ + T + +++ P +G +++ D++
Sbjct: 187 DDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAIATKDVR 246
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240
L V K L S G +I + +NH+ V W SW ++ ++A
Sbjct: 247 IFTLKPVRKELTSSGGPTKFEIHIV--------AQFDNHNSQV----WRVSWNITGTVLA 294
Query: 241 SCSQDRKVIIWTSNDYVTW 259
S D V +W +N W
Sbjct: 295 SSGDDGCVRLWKANYMDNW 313
>UNIPROTKB|E1BYP7 [details] [associations]
symbol:SEH1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0006999
"nuclear pore organization" evidence=IEA] [GO:0007080 "mitotic
metaphase plate congression" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051315
GO:GO:0007080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 OMA:YEAPDIM EMBL:AADN02058864
IPI:IPI00575685 RefSeq:XP_003640847.1 Ensembl:ENSGALT00000022497
GeneID:100859886 KEGG:gga:100859886 Uniprot:E1BYP7
Length = 419
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 79/251 (31%), Positives = 126/251 (50%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H D+IHD D+ G +ATCSSD +VKV++ N D H A K HSG VW+
Sbjct: 11 HRDLIHDVSFDFHGRRMATCSSDQSVKVWDKSEN---GDWHCT-----ASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
PK GL+LA S+DG + + + + W + + + C+ +SW P S S
Sbjct: 123 PKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNP---SSSRAH- 178
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKLENHSDWVRDVAWAPSWGLSKC 237
S + V S ++I++ + K+ + L +D V D+A+AP+ G S
Sbjct: 179 --SPMIAVGSDDNSPNILAKVQIYEYNENTRKYAKAEALMTVTDPVHDIAFAPNLGRSFH 236
Query: 238 MIASCSQDRKV 248
++A ++D ++
Sbjct: 237 ILAVATKDVRI 247
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 63/259 (24%), Positives = 110/259 (42%)
Query: 25 GLYLATCSSDHTVKVFNL---DRNLK-KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
G LA+CS D T V+ + N K + SH K T + + + V V +A G
Sbjct: 71 GQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTS---VTDVKFAPKHMG 127
Query: 81 TLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS 133
+LA+CS D V I+ + W +E + S + I+W P + ++A GS
Sbjct: 128 LMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCK-LSCSCISWNPSSSRAHSPMIAVGS 186
Query: 134 SDGTISFLT------YMSDTNSW-ESRKIAAHTIGCNAVSWGPGIG------SLSELDLK 180
D + + L Y +T + ++ + T + +++ P +G +++ D++
Sbjct: 187 DDNSPNILAKVQIYEYNENTRKYAKAEALMTVTDPVHDIAFAPNLGRSFHILAVATKDVR 246
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240
L + K L S G L K + I + +NH+ V W SW ++ ++A
Sbjct: 247 IFTLKPLRKELTSSG--GLTKF-----EIHIV-AQFDNHNSQV----WRVSWNITGTVLA 294
Query: 241 SCSQDRKVIIWTSNDYVTW 259
S D V +W +N W
Sbjct: 295 SSGDDGCVRLWKANYMDNW 313
>UNIPROTKB|Q5RAN6 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9601 "Pongo abelii"
[GO:0006999 "nuclear pore organization" evidence=ISS] [GO:0007080
"mitotic metaphase plate congression" evidence=ISS] [GO:0031080
"nuclear pore outer ring" evidence=ISS] [GO:0051315 "attachment of
spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0000776 "kinetochore"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 EMBL:CR858979 RefSeq:NP_001125688.1
UniGene:Pab.10091 ProteinModelPortal:Q5RAN6 PRIDE:Q5RAN6
GeneID:100172610 KEGG:pon:100172610 InParanoid:Q5RAN6
Uniprot:Q5RAN6
Length = 360
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 79/251 (31%), Positives = 126/251 (50%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD D+ G +ATCSSD +VKV+ D S S A K HSG VW+
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVW--------DKSESGDWHCTASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
PK GL+LA S+DG + + + + W + + + C+ +SW P S S
Sbjct: 123 PKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNP---SSSRAH- 178
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKLENHSDWVRDVAWAPSWGLSKC 237
S + V S ++I++ + K+ + L +D V D+A+AP+ G S
Sbjct: 179 --SPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFH 236
Query: 238 MIASCSQDRKV 248
++A ++D ++
Sbjct: 237 ILAIATKDVRI 247
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 61/259 (23%), Positives = 106/259 (40%)
Query: 25 GLYLATCSSDHTVKVFNL---DRNLK-KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
G LA+CS D T V+ + N K + SH K T + + + V V +A G
Sbjct: 71 GQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTS---VTDVKFAPKHMG 127
Query: 81 TLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS 133
+LA+CS D V I+ + W +E + S + I+W P + ++A GS
Sbjct: 128 LMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCK-LSCSCISWNPSSSRAHSPMIAVGS 186
Query: 134 SDGT------ISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIG------SLSELDLK 180
D + + Y +T + ++ + T + +++ P +G +++ D++
Sbjct: 187 DDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAIATKDVR 246
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240
L V K L S G +I +NH+ V W SW ++ ++A
Sbjct: 247 IFTLKPVRKELTSSGGPTKFEIHIV--------AHFDNHNSQV----WRVSWNITGTVLA 294
Query: 241 SCSQDRKVIIWTSNDYVTW 259
S D V +W +N W
Sbjct: 295 SSGDDGCVRLWKANYMDNW 313
>UNIPROTKB|A7YY75 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9913 "Bos taurus"
[GO:0000776 "kinetochore" evidence=ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0031080 "nuclear pore
outer ring" evidence=ISS] [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299 EMBL:BC151606
IPI:IPI00839665 RefSeq:NP_001096559.1 UniGene:Bt.103393
ProteinModelPortal:A7YY75 STRING:A7YY75 Ensembl:ENSBTAT00000049050
GeneID:506509 KEGG:bta:506509 eggNOG:NOG257251
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
NextBio:20867635 ArrayExpress:A7YY75 Uniprot:A7YY75
Length = 360
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 76/249 (30%), Positives = 124/249 (49%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD D+ G +ATCSSD +VKV+ D S S + A K HSG VW+
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVW--------DKSESGEWHCTASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
PK GL+LA S+DG + + + + W + + + C+ +SW P S S
Sbjct: 123 PKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNP---SSSRAHA 179
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
+G + + + + + K+ + L +D V D+A+AP+ G S ++
Sbjct: 180 PMIAVGSDDSSPNAMAKVQIFE-YNENTRKYAKAETLLTVTDPVHDIAFAPNLGRSFHIL 238
Query: 240 ASCSQDRKV 248
A ++D ++
Sbjct: 239 AIATKDVRI 247
Score = 122 (48.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 61/259 (23%), Positives = 107/259 (41%)
Query: 25 GLYLATCSSDHTVKVFNL---DRNLK-KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
G LA+CS D T V+ + N K + SH K T + + + V V +A G
Sbjct: 71 GQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTS---VTDVKFAPKHMG 127
Query: 81 TLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS 133
+LA+CS D V I+ + W +E + S + I+W P + ++A GS
Sbjct: 128 LMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCK-LSCSCISWNPSSSRAHAPMIAVGS 186
Query: 134 SDGT------ISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIG------SLSELDLK 180
D + + Y +T + ++ + T + +++ P +G +++ D++
Sbjct: 187 DDSSPNAMAKVQIFEYNENTRKYAKAETLLTVTDPVHDIAFAPNLGRSFHILAIATKDVR 246
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 240
L V K L S G +I + +NH+ V W SW ++ ++A
Sbjct: 247 IFTLKPVRKELTSSGGPTKFEIHIV--------AQFDNHNSQV----WRVSWNITGTVLA 294
Query: 241 SCSQDRKVIIWTSNDYVTW 259
S D V +W +N W
Sbjct: 295 SSGDDGCVRLWKANYMDNW 313
>MGI|MGI:1919374 [details] [associations]
symbol:Seh1l "SEH1-like (S. cerevisiae" species:10090 "Mus
musculus" [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=ISO] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007080
"mitotic metaphase plate congression" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0031080 "nuclear pore outer
ring" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1919374 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CH466528
GO:GO:0015031 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
OrthoDB:EOG4DJJWR ChiTaRS:SEH1L EMBL:AK011330 EMBL:AK088835
EMBL:AK143727 EMBL:AK166573 EMBL:AK169231 EMBL:AK169388
EMBL:AK170591 EMBL:BC027244 IPI:IPI00315517 IPI:IPI00406514
RefSeq:NP_001034177.1 RefSeq:NP_082388.1 UniGene:Mm.307315
ProteinModelPortal:Q8R2U0 SMR:Q8R2U0 STRING:Q8R2U0
PhosphoSite:Q8R2U0 PaxDb:Q8R2U0 PRIDE:Q8R2U0
Ensembl:ENSMUST00000025421 GeneID:72124 KEGG:mmu:72124
UCSC:uc008fmx.1 UCSC:uc008fmy.1 InParanoid:Q3UP79 NextBio:335500
Bgee:Q8R2U0 Genevestigator:Q8R2U0 Uniprot:Q8R2U0
Length = 360
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 77/249 (30%), Positives = 123/249 (49%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D+IHD D+ G +ATCSSD +VKV+ D S S A K HSG VW+
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVW--------DKSESGDWHCTASWKTHSGSVWR 62
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR---GDNGN-------WFKYYEYNNHDSSVNSIAWA 121
V WAHP+FG +LASCS+DR +W G++ + W K + +SV + +A
Sbjct: 63 VTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFA 122
Query: 122 PKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
PK GL+LA S+DG + + + + W + + + C+ +SW P S S
Sbjct: 123 PKHMGLMLATCSADGIVRVYEAPDVMNLSQWSLQHEVSCKLCCSCISWNP---SSSRAHP 179
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
+G S + + + + K+ + L +D V D+A+AP+ G S ++
Sbjct: 180 PMIAVGSDDSSPNSMAKVQIFE-YNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHIL 238
Query: 240 ASCSQDRKV 248
A ++D ++
Sbjct: 239 AVATKDVRI 247
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 160 (61.4 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 55 KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHDS 113
K + +++L+GH VW VAW +P GT+LASC D+ + +W + G+W K + H
Sbjct: 2 KMSKLSDLEGHEDRVWNVAW-NPS-GTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQR 59
Query: 114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGP 169
+V ++W+ G LA S DGT DT +ES + H A W P
Sbjct: 60 TVRGVSWS--NCGRYLASSSFDGTTCIWRRQDDT--FESCATLEGHENEVKACGWSP 112
Score = 145 (56.1 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 45/169 (26%), Positives = 78/169 (46%)
Query: 2 VSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE 61
+S+L+ ++ GHED + + + G LA+C D +++++ L+ S K L
Sbjct: 3 MSKLSDLE-GHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGG-----SWVCKSVL--- 53
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L GH V V+W++ G LAS S+D IWR + + H++ V + W+
Sbjct: 54 LDGHQRTVRGVSWSN--CGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWS 111
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGP 169
P G LA S D T+ ++ + + +E + H+ V W P
Sbjct: 112 PS--GRFLATCSRDKTV-WIWEVGEDEEFECASVQTCHSQDVKKVLWHP 157
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 63/226 (27%), Positives = 98/226 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G +LATCS D TV ++ + + + + + Q T HS V
Sbjct: 100 GHENEVKACGWSPSGRFLATCSRDKTVWIWEVGEDEEFECASVQ--TC------HSQDVK 151
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
+V W HP L AS SYD + + + +W Y + H S+V +++ P + +
Sbjct: 152 KVLW-HPDRDEL-ASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGPGPEPQLAS 209
Query: 131 CGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
C ++DG++ D SWE + H VSW G L+ + G A
Sbjct: 210 C-AADGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLA------TACGDNAV 262
Query: 190 RL-VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
R+ V G D W+ + T + HS V V+W+PS GL
Sbjct: 263 RVFVKDGGDCS---WR------LGCTLTQAHSQDVNSVSWSPSGGL 299
Score = 140 (54.3 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S DN I+ + +E D W L+ H+ V +++ P + +ASC+ D V +
Sbjct: 162 LASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGPG---PEPQLASCAADGSVYV 218
Query: 251 W-TSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW-KENTDGAWQ 304
W T D +W + V++VSW T L +CGDN+V ++ K+ D +W+
Sbjct: 219 WGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVFVKDGGDCSWR 275
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 179 LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
++G + L S D IW+++ D + LE H + V+ W+PS G
Sbjct: 61 VRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWSPS-GR---F 116
Query: 239 IASCSQDRKVIIW-TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297
+A+CS+D+ V IW D + V V W D L + DN++ + E
Sbjct: 117 LATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIRFFCE 176
Query: 298 NTDGAWQCITEMGK 311
D WQC + K
Sbjct: 177 EVDD-WQCYCTLDK 189
Score = 124 (48.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/118 (28%), Positives = 51/118 (43%)
Query: 191 LVSGGCDNLIKIWKQEGDKWI-EETKLENHSDWVRDVAWAPSWGLSKC--MIASCSQDRK 247
L S G D I++W EG W+ + L+ H VR V+W S C +AS S D
Sbjct: 28 LASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVSW------SNCGRYLASSSFDGT 81
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
IW D + + ++ V WS +G L D +V +W+ D ++C
Sbjct: 82 TCIWRRQDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWIWEVGEDEEFEC 139
Score = 121 (47.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT--PFIMNTFDDVVWN 273
LE H D V +VAW PS G ++ASC D+ + +W + +W +++ V
Sbjct: 9 LEGHEDRVWNVAWNPS-GT---ILASCGGDKSIRLW-GLEGGSWVCKSVLLDGHQRTVRG 63
Query: 274 VSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRA 317
VSWS G L S D + +W+ D C T G +E +A
Sbjct: 64 VSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKA 107
>WB|WBGene00003804 [details] [associations]
symbol:npp-18 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0045132 GO:GO:0051028 KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
EMBL:AL021481 PIR:T26842 RefSeq:NP_499740.1
ProteinModelPortal:O45933 SMR:O45933 STRING:O45933 PaxDb:O45933
EnsemblMetazoa:Y43F4B.4.1 EnsemblMetazoa:Y43F4B.4.2 GeneID:176748
KEGG:cel:CELE_Y43F4B.4 UCSC:Y43F4B.4 CTD:176748 WormBase:Y43F4B.4
InParanoid:O45933 NextBio:893842 Uniprot:O45933
Length = 363
Score = 224 (83.9 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 54/170 (31%), Positives = 87/170 (51%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H D+IH D G +ATC+SD T+ ++ DR K D + ++ A K H G VW+
Sbjct: 16 HRDLIHCVSFDPHGRRMATCASDMTMAIW--DR---KPDGNWRRS---AHWKCHGGAVWR 67
Query: 72 VAWAHPQFGTLLASCSYDRKVIIW-----RGDN------GNWFKYYEYNNHDSSVNSIAW 120
V WAHP+FG ++A+CSYDR ++IW R + W + +++ S V I +
Sbjct: 68 VIWAHPEFGQIVATCSYDRTIVIWEEQIVRSEKDLKQKESQWIRRTIISDNRSDVTDICF 127
Query: 121 APKEFGLILACGSSDGTISFLTY--MSDTNSWES-RKIAAHTIGCNAVSW 167
+P+ GL++A + GT+ + D + W ++ A C V+W
Sbjct: 128 SPRHLGLMMASCNVLGTVRIYEAPDIVDASRWNLIHELQAFHTRCGCVTW 177
Score = 54 (24.1 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 272 WNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
W + ++L G +++ + D ++ WK W ++EM
Sbjct: 293 WRLRYNLMGSVISSTSLDGTLRSWKSLFVNQWVKLSEM 330
Score = 43 (20.2 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 13/45 (28%), Positives = 17/45 (37%)
Query: 227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV 271
AW + L +I+S S D + W S W DD V
Sbjct: 292 AWRLRYNLMGSVISSTSLDGTLRSWKSLFVNQWVKLSEMNVDDYV 336
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 164 (62.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 69/248 (27%), Positives = 108/248 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V V+ +D ++D + ++ L H+ V
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD----EEDEYE----CVSVLNSHTQDVK 154
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLAS SYD V +++ + +W H+S+V SIA+ P G LA
Sbjct: 155 HVVW-HPS-QELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPS--GQRLA 210
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR 190
S D T+ N + + V G + + D+ +L G
Sbjct: 211 SCSDDRTVRIWRQYLPGNE-QGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGA--- 266
Query: 191 LVSGGCDNLIKIWKQE-GDKWIEET-KL-----ENHSDWVRDVAWAPSWGLSKCMIASCS 243
L + D+ I++++++ G + T L + HS V VAW P ++ASCS
Sbjct: 267 LATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPK---EAGLLASCS 323
Query: 244 QDRKVIIW 251
D +V W
Sbjct: 324 DDGEVAFW 331
Score = 163 (62.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S G D I+IW EGD WI ++ L E H VR VAW+P +AS S D
Sbjct: 31 LASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY----LASASFDATTC 86
Query: 250 IWTSN--DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
IW N D+ T + ++ V +V+W+ +G++L D SV +W+ + + ++C++
Sbjct: 87 IWKKNQDDFECVTT--LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS 144
Query: 308 EMGKTSE 314
+ ++
Sbjct: 145 VLNSHTQ 151
Score = 153 (58.9 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 43/146 (29%), Positives = 68/146 (46%)
Query: 6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH 65
+++ GH+ + G YLA+ S D T ++ +N +DD + L+GH
Sbjct: 54 SVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK--KN--QDDFEC-----VTTLEGH 104
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKE 124
V VAWA P G LLA+CS D+ V +W D + ++ N+H V + W P +
Sbjct: 105 ENEVKSVAWA-PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162
Query: 125 FGLILACGSSDGTISFLTYMSDTNSW 150
+LA S D T+ Y + + W
Sbjct: 163 E--LLASASYDDTVKL--YQEEGDDW 184
Score = 149 (57.5 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D IWK+ D + T LE H + V+ VAWAPS L +A+CS+D+ V +
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL----LATCSRDKSVWV 131
Query: 251 WTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
W ++ + ++N+ V +V W + ++L + D++V L++E D W C
Sbjct: 132 WEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDD-WVC 186
Score = 143 (55.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 43/145 (29%), Positives = 64/145 (44%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFN--LDRNLK--KDDSHSQKGTLIAELKG-H 65
GHE + D G LA+CS D TV+++ L N + + L G H
Sbjct: 192 GHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFH 251
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-----WFKYYEY--NNHDSSVNSI 118
+ ++ VAW G L +C D + ++ D G+ F + H VN +
Sbjct: 252 TRTIYDVAWCQLT-GALATACG-DDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCV 309
Query: 119 AWAPKEFGLILACGSSDGTISFLTY 143
AW PKE GL+ +C S DG ++F Y
Sbjct: 310 AWNPKEAGLLASC-SDDGEVAFWEY 333
Score = 140 (54.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D ++++ + DS K L +GH V +VAW+ P G LA
Sbjct: 28 GTLLASCGGDRKIRIWGTE-----GDSWICKSVLS---EGHQRTVRKVAWS-P-CGNYLA 77
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
S S+D IW+ + ++ H++ V S+AWAP G +LA S D ++ ++ +
Sbjct: 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSV-WVWEV 134
Query: 145 SDTNSWESRKIA-AHTIGCNAVSWGP 169
+ + +E + +HT V W P
Sbjct: 135 DEEDEYECVSVLNSHTQDVKHVVWHP 160
Score = 129 (50.5 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +K++++EGD W+ LE H V +A+ PS G +ASCS DR V I
Sbjct: 165 LASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPS-GQR---LASCSDDRTVRI 220
Query: 251 WT------------SNDYVTWTPFI-MNTFDD-VVWNVSW-SLTGDILTVSCGDNSVSLW 295
W S +W ++ F +++V+W LTG + T +CGD+++ ++
Sbjct: 221 WRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGALAT-ACGDDAIRVF 279
Query: 296 KEN 298
+E+
Sbjct: 280 EED 282
Score = 123 (48.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 30/113 (26%), Positives = 55/113 (48%)
Query: 208 DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW-TSNDYVTWTPFIMNT 266
D + ++++ H D W +W + ++ASC DRK+ IW T D +
Sbjct: 3 DALVLQSRVPAHPD---SRCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEG 59
Query: 267 FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM-GKTSEQRAM 318
V V+WS G+ L + D + +WK+N D ++C+T + G +E +++
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-FECVTTLEGHENEVKSV 111
>UNIPROTKB|I3LR40 [details] [associations]
symbol:SEH1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051315 "attachment of spindle microtubules to
kinetochore involved in mitotic sister chromatid segregation"
evidence=IEA] [GO:0007080 "mitotic metaphase plate congression"
evidence=IEA] [GO:0006999 "nuclear pore organization" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0051315 GO:GO:0007080 GO:GO:0006999
GeneTree:ENSGT00550000074999 OMA:YEAPDIM EMBL:FP565312
Ensembl:ENSSSCT00000023051 Uniprot:I3LR40
Length = 324
Score = 224 (83.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 61/216 (28%), Positives = 104/216 (48%)
Query: 49 DDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR---GDNGN---- 101
D S S A K HSG VW+V WAHP+FG +LASCS+DR +W G++ +
Sbjct: 3 DKSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRG 62
Query: 102 ---WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTY--MSDTNSWESRKIA 156
W K + +SV + +APK GL+LA S+DG + + + + W +
Sbjct: 63 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEV 122
Query: 157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI----WKQEGDKWIE 212
+ + C+ +SW P S + + +A G + + K+ + + K+ +
Sbjct: 123 SCKLSCSCISWNPS-SSRAHPPM-------IAVGSDDGSPNAMAKVQIFEYNENTRKYAK 174
Query: 213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
L +D V D+A+AP+ G S ++A ++D ++
Sbjct: 175 AETLMTVTDPVHDIAFAPNLGRSFHILAIATKDVRI 210
Score = 180 (68.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/228 (26%), Positives = 105/228 (46%)
Query: 96 RGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTY--MSDTNSWESR 153
RG + +W K + +SV + +APK GL+LA S+DG + + + + W +
Sbjct: 61 RGQS-HWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQ 119
Query: 154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI----WKQEGDK 209
+ + C+ +SW P S + + +A G + + K+ + + K
Sbjct: 120 HEVSCKLSCSCISWNPS-SSRAHPPM-------IAVGSDDGSPNAMAKVQIFEYNENTRK 171
Query: 210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW--TSNDYVTW----TPF- 262
+ + L +D V D+A+AP+ G S ++A ++D ++ S +T T F
Sbjct: 172 YAKAETLMTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVSRKELTSSGGPTKFE 231
Query: 263 --IMNTFDD---VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
++ FD+ VW VSW++TG +L S D V LWK N W+C
Sbjct: 232 IQVVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKC 279
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 163 (62.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S G D I+IW EGD WI ++ L E H VR VAW+P +AS S D
Sbjct: 31 LASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY----LASASFDATTC 86
Query: 250 IWTSN--DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
IW N D+ T + ++ V +V+W+ +G++L D SV +W+ + + ++C++
Sbjct: 87 IWKKNQDDFECVTT--LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS 144
Query: 308 EMGKTSE 314
+ ++
Sbjct: 145 VLSSHTQ 151
Score = 163 (62.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 68/248 (27%), Positives = 108/248 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V V+ +D ++D + ++ L H+ V
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD----EEDEYE----CVSVLSSHTQDVK 154
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLAS SYD V +++ + +W H+S+V SIA+ P G LA
Sbjct: 155 HVVW-HPS-QELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPS--GQRLA 210
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR 190
S D T+ N + + + G + + D+ +L G
Sbjct: 211 SCSDDRTVRIWRQYLPGNE-QGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGA--- 266
Query: 191 LVSGGCDNLIKIWKQE-GDKWIEET-KL-----ENHSDWVRDVAWAPSWGLSKCMIASCS 243
L + D+ I++++++ G + T L + HS V VAW P ++ASCS
Sbjct: 267 LATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPK---EPGLLASCS 323
Query: 244 QDRKVIIW 251
D +V W
Sbjct: 324 DDGEVAFW 331
Score = 148 (57.2 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH 65
+++ GH+ + G YLA+ S D T ++ +N +DD + L+GH
Sbjct: 54 SVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK--KN--QDDFEC-----VTTLEGH 104
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKE 124
V VAWA P G LLA+CS D+ V +W D + ++ ++H V + W P +
Sbjct: 105 ENEVKSVAWA-PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQ 162
Query: 125 FGLILACGSSDGTISFLTYMSDTNSW 150
+LA S D T+ Y + + W
Sbjct: 163 E--LLASASYDDTVKL--YQEEGDDW 184
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/116 (31%), Positives = 61/116 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D IWK+ D + T LE H + V+ VAWAPS L +A+CS+D+ V +
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL----LATCSRDKSVWV 131
Query: 251 WTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
W ++ + ++++ V +V W + ++L + D++V L++E D W C
Sbjct: 132 WEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDD-WVC 186
Score = 142 (55.0 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D ++++ + DS K L +GH V +VAW+ P G LA
Sbjct: 28 GTLLASCGGDRKIRIWGTE-----GDSWICKSVLS---EGHQRTVRKVAWS-P-CGNYLA 77
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
S S+D IW+ + ++ H++ V S+AWAP G +LA S D ++ ++ +
Sbjct: 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSV-WVWEV 134
Query: 145 SDTNSWESRKI-AAHTIGCNAVSWGP 169
+ + +E + ++HT V W P
Sbjct: 135 DEEDEYECVSVLSSHTQDVKHVVWHP 160
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 44/145 (30%), Positives = 64/145 (44%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFN--LDRNLK--KDDSHSQKGTLIAELKG-H 65
GHE + D G LA+CS D TV+++ L N + I L G H
Sbjct: 192 GHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFH 251
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-----WFKYYEY--NNHDSSVNSI 118
+ ++ VAW G L +C D + ++ D G+ F + H VN +
Sbjct: 252 TRTIYDVAWCQLT-GALATACG-DDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCV 309
Query: 119 AWAPKEFGLILACGSSDGTISFLTY 143
AW PKE GL+ +C S DG ++F Y
Sbjct: 310 AWNPKEPGLLASC-SDDGEVAFWEY 333
Score = 130 (50.8 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +K++++EGD W+ LE H V +A+ PS G +ASCS DR V I
Sbjct: 165 LASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPS-GQR---LASCSDDRTVRI 220
Query: 251 WT------------SNDYVTWTPFI-MNTFDD-VVWNVSW-SLTGDILTVSCGDNSVSLW 295
W S +W ++ F +++V+W LTG + T +CGD+++ ++
Sbjct: 221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGALAT-ACGDDAIRVF 279
Query: 296 KEN 298
+E+
Sbjct: 280 EED 282
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 208 DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW-TSNDYVTWTPFIMNT 266
D + ++++ H D W +W S ++ASC DRK+ IW T D +
Sbjct: 3 DSLVLQSRVPAHPD---SRCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEG 59
Query: 267 FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM-GKTSEQRAM 318
V V+WS G+ L + D + +WK+N D ++C+T + G +E +++
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-FECVTTLEGHENEVKSV 111
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 171 (65.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 69/248 (27%), Positives = 109/248 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V V+ +D ++D + ++ L H+ V
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD----EEDEYE----CVSVLNSHTQDVK 154
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLAS SYD V ++R + +W H+S+V S+A+ P G LA
Sbjct: 155 HVVW-HPS-QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS--GQRLA 210
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR 190
S D T+ N + + V G S + D+ +L G
Sbjct: 211 SCSDDRTVRIWRQYLPGNE-QGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGT--- 266
Query: 191 LVSGGCDNLIKIWKQE-GDKWIEET-KL-----ENHSDWVRDVAWAPSWGLSKCMIASCS 243
L + D+ I++++++ G + T L + HS V VAW P + ++ASCS
Sbjct: 267 LATACGDDAIRVFEEDPGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPK---ERGLLASCS 323
Query: 244 QDRKVIIW 251
D ++ W
Sbjct: 324 DDGELAFW 331
Score = 164 (62.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 37/125 (29%), Positives = 65/125 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S G D ++IW +EGD WI ++ L E H VR VAW+P +AS S D
Sbjct: 31 LASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNY----LASASFDATTC 86
Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
IW N+ + ++ V +V+W+ +G++L D SV +W+ + + ++C++ +
Sbjct: 87 IWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146
Query: 310 GKTSE 314
++
Sbjct: 147 NSHTQ 151
Score = 151 (58.2 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 43/141 (30%), Positives = 65/141 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ + G YLA+ S D T ++ +N +DD + L+GH V
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWK--KN--EDDFEC-----VTTLEGHENEVK 109
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEFGLIL 129
VAWA P G LLA+CS D+ V +W D + ++ N+H V + W P + +L
Sbjct: 110 SVAWA-PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE--LL 165
Query: 130 ACGSSDGTISFLTYMSDTNSW 150
A S D T+ Y + + W
Sbjct: 166 ASASYDDTVKL--YREEEDDW 184
Score = 151 (58.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 45/145 (31%), Positives = 67/145 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFN--LDRNLKKDDSHSQKGT--LIAELKG-H 65
GHE + D G LA+CS D TV+++ L N + + + + L G H
Sbjct: 192 GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGFH 251
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-----WFKYYEY--NNHDSSVNSI 118
S ++ VAW GTL +C D + ++ D G+ F + H VN +
Sbjct: 252 SRTIYDVAWCQLT-GTLATACG-DDAIRVFEEDPGSDPQQPTFSLTAHVPQAHSQDVNCV 309
Query: 119 AWAPKEFGLILACGSSDGTISFLTY 143
AW PKE GL+ +C S DG ++F Y
Sbjct: 310 AWNPKERGLLASC-SDDGELAFWKY 333
Score = 146 (56.5 bits), Expect = 9.9e-17, Sum P(2) = 9.9e-17
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D +V+++ ++ DS K L +GH V +VAW+ P G LA
Sbjct: 28 GTLLASCGGDRSVRIWG-----REGDSWICKSVLC---EGHQRTVRKVAWS-P-CGNYLA 77
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
S S+D IW+ + ++ H++ V S+AWAP G +LA S D ++ ++ +
Sbjct: 78 SASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSV-WVWEV 134
Query: 145 SDTNSWESRKIA-AHTIGCNAVSWGP 169
+ + +E + +HT V W P
Sbjct: 135 DEEDEYECVSVLNSHTQDVKHVVWHP 160
Score = 125 (49.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +K++++E D W+ LE H V +A+ PS G +ASCS DR V I
Sbjct: 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS-GQR---LASCSDDRTVRI 220
Query: 251 WT------------SNDYVTWTPFI-MNTFDD-VVWNVSW-SLTGDILTVSCGDNSVSLW 295
W S +W ++ F +++V+W LTG + T +CGD+++ ++
Sbjct: 221 WRQYLPGNEQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLAT-ACGDDAIRVF 279
Query: 296 KEN 298
+E+
Sbjct: 280 EED 282
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 169 (64.5 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 66/248 (26%), Positives = 107/248 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V V+ +D ++D + ++ L H+ V
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD----EEDEYE----CVSVLNSHTQDVK 154
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLAS SYD V ++R + +W H+S+V S+A+ P G LA
Sbjct: 155 HVVW-HPS-QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS--GQRLA 210
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR 190
S D T+ N + + + G S + D+ +L G
Sbjct: 211 SCSDDRTVRIWRQYLPGNE-QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA--- 266
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-------ENHSDWVRDVAWAPSWGLSKCMIASCS 243
L + D+ I++++++ + ++ + HS V VAW P ++ASCS
Sbjct: 267 LATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPK---EPGLLASCS 323
Query: 244 QDRKVIIW 251
D +V W
Sbjct: 324 DDGEVAFW 331
Score = 163 (62.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S G D I+IW EGD WI ++ L E H VR VAW+P +AS S D
Sbjct: 31 LASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY----LASASFDATTC 86
Query: 250 IWTSN--DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
IW N D+ T + ++ V +V+W+ +G++L D SV +W+ + + ++C++
Sbjct: 87 IWKKNQDDFECVTT--LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS 144
Query: 308 EMGKTSE 314
+ ++
Sbjct: 145 VLNSHTQ 151
Score = 153 (58.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 43/146 (29%), Positives = 68/146 (46%)
Query: 6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH 65
+++ GH+ + G YLA+ S D T ++ +N +DD + L+GH
Sbjct: 54 SVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK--KN--QDDFEC-----VTTLEGH 104
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKE 124
V VAWA P G LLA+CS D+ V +W D + ++ N+H V + W P +
Sbjct: 105 ENEVKSVAWA-PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162
Query: 125 FGLILACGSSDGTISFLTYMSDTNSW 150
+LA S D T+ Y + + W
Sbjct: 163 E--LLASASYDDTVKL--YREEEDDW 184
Score = 151 (58.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D IWK+ D + T LE H + V+ VAWAPS L +A+CS+D+ V +
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL----LATCSRDKSVWV 131
Query: 251 WTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
W ++ + ++N+ V +V W + ++L + D++V L++E D W C
Sbjct: 132 WEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD-WVC 186
Score = 143 (55.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 43/144 (29%), Positives = 62/144 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFN--LDRNLK--KDDSHSQKGTLIAELKG-H 65
GHE + D G LA+CS D TV+++ L N + I L G H
Sbjct: 192 GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFH 251
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN----WFKY--YEYNNHDSSVNSIA 119
S ++ +AW G L +C D + N + F + + H VN +A
Sbjct: 252 SRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA 310
Query: 120 WAPKEFGLILACGSSDGTISFLTY 143
W PKE GL+ +C S DG ++F Y
Sbjct: 311 WNPKEPGLLASC-SDDGEVAFWKY 333
Score = 140 (54.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D ++++ + DS K L +GH V +VAW+ P G LA
Sbjct: 28 GTLLASCGGDRRIRIWGTE-----GDSWICKSVLS---EGHQRTVRKVAWS-P-CGNYLA 77
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
S S+D IW+ + ++ H++ V S+AWAP G +LA S D ++ ++ +
Sbjct: 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSV-WVWEV 134
Query: 145 SDTNSWESRKIA-AHTIGCNAVSWGP 169
+ + +E + +HT V W P
Sbjct: 135 DEEDEYECVSVLNSHTQDVKHVVWHP 160
Score = 122 (48.0 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 38/127 (29%), Positives = 65/127 (51%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +K++++E D W+ LE H V +A+ PS G +ASCS DR V I
Sbjct: 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS-GQR---LASCSDDRTVRI 220
Query: 251 WT------------SNDYVTWTPFI-MNTFDD-VVWNVSW-SLTGDILTVSCGDNSVSLW 295
W S +W ++ F +++++W LTG + T +CGD+++ ++
Sbjct: 221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT-ACGDDAIRVF 279
Query: 296 KE--NTD 300
+E N+D
Sbjct: 280 QEDPNSD 286
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 228 WAPSWGLSKCMIASCSQDRKVIIW-TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS 286
W +W + ++ASC DR++ IW T D + V V+WS G+ L +
Sbjct: 20 WFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA 79
Query: 287 CGDNSVSLWKENTDGAWQCITEM-GKTSEQRAM 318
D + +WK+N D ++C+T + G +E +++
Sbjct: 80 SFDATTCIWKKNQDD-FECVTTLEGHENEVKSV 111
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 182 (69.1 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 63/252 (25%), Positives = 110/252 (43%)
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
GH + + W+ P GT LAS S+D IW +G + H++ V S+ W+
Sbjct: 48 GHQRTIRSLGWS-P-CGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVS 105
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGS 182
L+ CG D ++ ++ + + + +E + +HT V W P E+
Sbjct: 106 G-SLLATCGR-DKSV-WIWEVQEDDEYECASVIHSHTQDVKKVVWHP----TKEI----- 153
Query: 183 KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242
L S D+ IK++K++ D W LE H V W+ S+ S I SC
Sbjct: 154 --------LASCSYDDTIKLYKEDEDDWSCCDTLEGHESTV----WSISFDGSGDRIVSC 201
Query: 243 SQDRKVIIW------------TSNDYVTWTPF-IMNTFDD-VVWNVSWSLTGDILTVSCG 288
S D+ V IW S + W +++ + D +++V WS ++ + G
Sbjct: 202 SDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASG 261
Query: 289 DNSVSLWKENTD 300
D+ + ++KE+T+
Sbjct: 262 DDCIRIFKEDTN 273
Score = 170 (64.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 65/255 (25%), Positives = 114/255 (44%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + + G LATC D +V ++ + ++DD + + +
Sbjct: 85 ECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEV----QEDDEYE----CASVIH 136
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
H+ V +V W HP +LASCSYD + +++ D +W H+S+V SI++
Sbjct: 137 SHTQDVKKVVW-HPT-KEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFDGS 194
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
I++C S D T+ N E ++ V G + D+ SK
Sbjct: 195 G-DRIVSC-SDDKTVRIWKSYPPGNQ-EGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSK 251
Query: 184 LGGVAKRLVSGGCDNLIKIWKQE--GDK-----WIEETKLENHSDWVRDVAWAPSWGLSK 236
+ G+ SG D+ I+I+K++ D+ + T+ + HS V + W P +
Sbjct: 252 VSGLIAT-ASG--DDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPK---DE 305
Query: 237 CMIASCSQDRKVIIW 251
++A+CS D V +W
Sbjct: 306 NILATCSDDGTVKLW 320
Score = 168 (64.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S G D I+IW +EGDKWI +T LE+ H +R + W+P G +AS S D
Sbjct: 20 LASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPC-GT---FLASASFDATTC 75
Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGAWQC 305
IW + ++ V +V WS++G +L +CG D SV +W+ D ++C
Sbjct: 76 IWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLA-TCGRDKSVWIWEVQEDDEYEC 131
Score = 150 (57.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGHED + G LA+C D T++++ K+ D K T++ + GH +
Sbjct: 2 TGHEDRVWSVAWSPNGFVLASCGGDKTIRIWG-----KEGDKWICK-TILED--GHQRTI 53
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
+ W+ P GT LAS S+D IW +G + H++ V S+ W+ L+
Sbjct: 54 RSLGWS-P-CGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSG-SLLA 110
Query: 130 ACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
CG D ++ ++ + + + +E + +HT V W P
Sbjct: 111 TCGR-DKSV-WIWEVQEDDEYECASVIHSHTQDVKKVVWHP 149
Score = 147 (56.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 78/305 (25%), Positives = 128/305 (41%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
+++ GH+ I G +LA+ S D T ++ D S + A L+GH
Sbjct: 44 ILEDGHQRTIRSLGWSPCGTFLASASFDATTCIW---------DQKSGEFECNATLEGHE 94
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAP-KE 124
V V W+ G+LLA+C D+ V IW + ++ ++H V + W P KE
Sbjct: 95 NEVKSVDWSVS--GSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKE 152
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSW-GPGIGSLSELDLKGS 182
ILA S D TI Y D + W + H ++S+ G G +S D K
Sbjct: 153 ---ILASCSYDDTIKL--YKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTV 207
Query: 183 KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD-WVRDVAWAPSWGLSKCMIAS 241
++ K G + ++ K KW L + D + DV W+ GL IA+
Sbjct: 208 RIW---KSYPPGNQEGVVVSGKHT--KWKCVCVLSGYHDRTIYDVHWSKVSGL----IAT 258
Query: 242 CSQDRKVIIW---TSND------YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-S 291
S D + I+ T++D + T ++ D V ++ W + + +C D+ +
Sbjct: 259 ASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMD--VNSICWHPKDENILATCSDDGT 316
Query: 292 VSLWK 296
V LW+
Sbjct: 317 VKLWR 321
Score = 133 (51.9 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 36/131 (27%), Positives = 69/131 (52%)
Query: 191 LVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L + G D + IW+ QE D++ + + +H+ V+ V W P+ K ++ASCS D +
Sbjct: 109 LATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPT----KEILASCSYDDTIK 164
Query: 250 IWTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLWKENTDGAWQCIT 307
++ D W+ + + VW++S+ +GD + VSC D+ +V +WK G + +
Sbjct: 165 LY-KEDEDDWSCCDTLEGHESTVWSISFDGSGDRI-VSCSDDKTVRIWKSYPPGNQEGVV 222
Query: 308 EMGKTSEQRAM 318
GK ++ + +
Sbjct: 223 VSGKHTKWKCV 233
Score = 131 (51.2 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHDSSVNSIAW 120
+ GH VW VAW+ P G +LASC D+ + IW + W K + H ++ S+ W
Sbjct: 1 MTGHEDRVWSVAWS-PN-GFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGW 58
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWE---SRKIAAHTIGCNAVSWGPGIGSL 174
+P G LA S D T T + D S E + + H +V W GSL
Sbjct: 59 SP--CGTFLASASFDAT----TCIWDQKSGEFECNATLEGHENEVKSVDWSVS-GSL 108
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 209 (78.6 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 84/305 (27%), Positives = 136/305 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGH A G LATC D T++++ D + + K T++++ GHS +
Sbjct: 11 TGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQR----WVAK-TVLSD--GHSRTI 63
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
VAW+ P G LAS S+D V IW +G + H++ V S++W+ G +L
Sbjct: 64 RDVAWS-P-CGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKS--GSLL 119
Query: 130 ACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVA 188
A S D ++ ++ ++ + +E + HT V W P D+
Sbjct: 120 ATCSRDKSV-WVWEVAQEDEYECAAVLNTHTQDVKKVEWHP------HEDI--------- 163
Query: 189 KRLVSGGCDNLIKIWKQE-GDK-WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246
L S DN IK++K++ D W L +H V W+ S+ S +ASCS D+
Sbjct: 164 --LASASYDNTIKLYKEDLADSDWSSFDTLVSHESTV----WSISFDGSGNRLASCSDDQ 217
Query: 247 KVIIWTS----NDY-VTW---TPF------IMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
V IW N++ V+ TP + V+++SW +L +CGD+ V
Sbjct: 218 TVKIWQEYKPGNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISWCKQSGLLATACGDDMV 277
Query: 293 SLWKE 297
++KE
Sbjct: 278 RIFKE 282
Score = 160 (61.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 82/301 (27%), Positives = 120/301 (39%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH I D G YLA+ S D TV +++ KK TL +GH
Sbjct: 54 VLSDGHSRTIRDVAWSPCGQYLASASFDATVAIWD-----KKSGEFECNATL----EGHE 104
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEF 125
V V+W+ + G+LLA+CS D+ V +W + ++ N H V + W P E
Sbjct: 105 NEVKSVSWS--KSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHED 162
Query: 126 GLILACGSSDGTISFLTYMSDT--NSWES-RKIAAHTIGCNAVSW-GPGIGSLSELDLKG 181
ILA S D TI Y D + W S + +H ++S+ G G S D +
Sbjct: 163 --ILASASYDNTIKL--YKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQT 218
Query: 182 SKLGGVAKRLVSGG--CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
K+ K G C + +WK T HS V D++W GL
Sbjct: 219 VKIWQEYKPGNEFGVSCPDNTPVWK------CVCTLAGYHSRSVYDISWCKQSGLLATAC 272
Query: 240 AS-CSQDRKVIIWTSNDYVTWTPF-IMNTFDDVVWNVSWSLT--GDILTVSCGDNSVSLW 295
+ K + +S T+ + V V W+ T G ++T S D V LW
Sbjct: 273 GDDMVRIFKEVEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTS-DDGDVKLW 331
Query: 296 K 296
K
Sbjct: 332 K 332
Score = 152 (58.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 71/258 (27%), Positives = 111/258 (43%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V V+ + ++D + A L
Sbjct: 95 ECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEV----AQEDEYE----CAAVLN 146
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + +++ D + +W + +H+S+V SI++
Sbjct: 147 THTQDVKKVEW-HPH-EDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFD 204
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
G LA S D T+ N + +T V G S S D+
Sbjct: 205 GS--GNRLASCSDDQTVKIWQEYKPGNEF-GVSCPDNTPVWKCVCTLAGYHSRSVYDISW 261
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQ-EGDKWIEET-----KLENHSDWVRDVAWAPSW-G 233
K G L++ C D++++I+K+ EG E T HS V V W P+ G
Sbjct: 262 CKQSG----LLATACGDDMVRIFKEVEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVG 317
Query: 234 LSKCMIASCSQDRKVIIW 251
L + + S D V +W
Sbjct: 318 L----LVTTSDDGDVKLW 331
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 37/117 (31%), Positives = 59/117 (50%)
Query: 191 LVSGGCDNLIKIWKQEGD-KWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
L + G D I+IW ++ +W+ +T L + HS +RDVAW+P G +AS S D V
Sbjct: 29 LATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSPC-GQ---YLASASFDATV 84
Query: 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
IW + ++ V +VSWS +G +L D SV +W+ + ++C
Sbjct: 85 AIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYEC 141
Score = 139 (54.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D + IW ++ ++ LE H + V+ V+W+ S L +A+CS+D+ V +
Sbjct: 75 LASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSL----LATCSRDKSVWV 130
Query: 251 W-TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN-TDGAW 303
W + + ++NT V V W DIL + DN++ L+KE+ D W
Sbjct: 131 WEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDW 185
Score = 137 (53.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 58 LIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD-NGNWF-KYYEYNNHDSSV 115
L+ L GH G W W HP+ G +LA+C D+ + IW D + W K + H ++
Sbjct: 6 LLQCLTGHRGRAWGAGW-HPK-GNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTI 63
Query: 116 NSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGIGSL 174
+AW+P G LA S D T++ + + +E + + H +VSW GSL
Sbjct: 64 RDVAWSP--CGQYLASASFDATVAI--WDKKSGEFECNATLEGHENEVKSVSWSKS-GSL 118
Score = 95 (38.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 30/111 (27%), Positives = 56/111 (50%)
Query: 197 DNLIKIWK--QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN 254
D + +W+ QE D++ L H+ V+ V W P + ++AS S D + ++
Sbjct: 125 DKSVWVWEVAQE-DEYECAAVLNTHTQDVKKVEWHPH----EDILASASYDNTIKLY-KE 178
Query: 255 DYVT--WTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLWKENTDG 301
D W+ F + + + VW++S+ +G+ L SC D+ +V +W+E G
Sbjct: 179 DLADSDWSSFDTLVSHESTVWSISFDGSGNRLA-SCSDDQTVKIWQEYKPG 228
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 38/109 (34%), Positives = 57/109 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S G D ++IW +EGD WI ++ L E H VR VAW+P +AS S D
Sbjct: 31 LASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNY----LASASFDATTC 86
Query: 250 IWTSN--DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
IW N D+ T + ++ V +V+W+ +G++L D SV +W+
Sbjct: 87 IWKKNKDDFECVTT--LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 45/145 (31%), Positives = 65/145 (44%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFN--LDRNLK--KDDSHSQKGTLIAELKG-H 65
GHE + D G LA+CS D TV+++ L N + + I L G H
Sbjct: 192 GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACNGSDPSWKCICTLSGFH 251
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-----WFKYYEY--NNHDSSVNSI 118
S ++ VAW G L +C D + ++ D G+ F + H VN +
Sbjct: 252 SRTIYDVAWCQLT-GALATACG-DDAIRVFEEDPGSDPQQPTFSLTAHLPQAHSQDVNCV 309
Query: 119 AWAPKEFGLILACGSSDGTISFLTY 143
AW PKE GL+ +C S DG ++F Y
Sbjct: 310 AWNPKEQGLLASC-SDDGELAFWKY 333
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/120 (32%), Positives = 57/120 (47%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D IWK+ D + T LE H + V+ VAWAPS L +A+CS+D+ V +
Sbjct: 76 LASASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWAPSGNL----LATCSRDKSVWV 131
Query: 251 WTSN-----DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
W T P+ + V+W+ S L L + D++V L++E D W C
Sbjct: 132 WEGTVENQPSDPTRVPYKPQSMKKVLWHPSQEL----LASASYDDTVKLYREEEDD-WVC 186
Score = 136 (52.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 67/249 (26%), Positives = 110/249 (44%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V V+ + ++ S + K S +
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVW--EGTVENQPSDPTR----VPYKPQS--MK 154
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
+V W HP LLAS SYD V ++R + +W H+S+V S+A+ P G LA
Sbjct: 155 KVLW-HPS-QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS--GQRLA 210
Query: 131 CGSSDGTIS-FLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
S D T+ + Y+ + + + C + G S + D+ +L G
Sbjct: 211 SCSDDRTVRIWRQYLPGNEQGVACNGSDPSWKC--ICTLSGFHSRTIYDVAWCQLTGA-- 266
Query: 190 RLVSGGCDNLIKIWKQE-GDKWIEET-KL-----ENHSDWVRDVAWAPSWGLSKCMIASC 242
L + D+ I++++++ G + T L + HS V VAW P + ++ASC
Sbjct: 267 -LATACGDDAIRVFEEDPGSDPQQPTFSLTAHLPQAHSQDVNCVAWNPK---EQGLLASC 322
Query: 243 SQDRKVIIW 251
S D ++ W
Sbjct: 323 SDDGELAFW 331
Score = 133 (51.9 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 37/114 (32%), Positives = 58/114 (50%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D +V+++ ++ DS K L +GH V +VAW+ P G LA
Sbjct: 28 GTLLASCGGDRSVRIWG-----REGDSWICKSVLC---EGHQRTVRKVAWS-P-CGNYLA 77
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138
S S+D IW+ + ++ H++ V S+AWAP G +LA S D ++
Sbjct: 78 SASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSV 129
Score = 132 (51.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 43/141 (30%), Positives = 61/141 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ + G YLA+ S D T ++ +N KDD + L+GH V
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWK--KN--KDDFEC-----VTTLEGHENEVK 109
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW-FKYYEYNNHDSSVNSIAWAPKEFGLIL 129
VAWA P G LLA+CS D+ V +W G N S+ + W P + +L
Sbjct: 110 SVAWA-PS-GNLLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLWHPSQE--LL 165
Query: 130 ACGSSDGTISFLTYMSDTNSW 150
A S D T+ Y + + W
Sbjct: 166 ASASYDDTVKL--YREEEDDW 184
Score = 121 (47.7 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +K++++E D W+ LE H V +A+ PS G +ASCS DR V I
Sbjct: 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS-GQR---LASCSDDRTVRI 220
Query: 251 WTS----NDY--------VTWTPFI-MNTFDD-VVWNVSW-SLTGDILTVSCGDNSVSLW 295
W N+ +W ++ F +++V+W LTG + T +CGD+++ ++
Sbjct: 221 WRQYLPGNEQGVACNGSDPSWKCICTLSGFHSRTIYDVAWCQLTGALAT-ACGDDAIRVF 279
Query: 296 KEN 298
+E+
Sbjct: 280 EED 282
Score = 83 (34.3 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 198 NLIKIWKQEGDKWIEETKLENH-SDWVRDVAWAPS------WGLSKCMIASCSQDRKVII 250
NL+ ++ W+ E +EN SD R V + P W S+ ++AS S D V +
Sbjct: 118 NLLATCSRDKSVWVWEGTVENQPSDPTR-VPYKPQSMKKVLWHPSQELLASASYDDTVKL 176
Query: 251 WTS--NDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLWKENTDG 301
+ +D+V + + VW++++ +G L SC D+ +V +W++ G
Sbjct: 177 YREEEDDWVCCAT--LEGHESTVWSLAFDPSGQRLA-SCSDDRTVRIWRQYLPG 227
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 186 (70.5 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 77/308 (25%), Positives = 138/308 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQ--KGTLIAELKGHSG 67
+GH + A LATC D T++++ DD + T++++ GH+
Sbjct: 11 SGHRGRVWGAGWHPRDPVLATCGEDKTIRIW-------ADDGTGRWVPKTVLSD--GHTR 61
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
+ VAW+ P G LAS S+D V IW +G + H++ V S++W+ G
Sbjct: 62 TIRDVAWS-P-CGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKS--GA 117
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGG 186
+LA S D ++ ++ ++ + +E + H+ V W P +E D+
Sbjct: 118 LLATCSRDKSV-WIWEVAQEDEYECAAVLNTHSQDVKKVEWHP-----NE-DV------- 163
Query: 187 VAKRLVSGGCDNLIKIWKQE-GDK-WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
L S DN I++++++ D W L +H V W+ ++ S +ASCS
Sbjct: 164 ----LASASYDNTIQLYREDLADSDWSSFDTLASHDSTV----WSIAFDASGSRLASCSD 215
Query: 245 DRKVIIWTS----NDY-VTW----TPF-----IMNTFDD-VVWNVSWSLTGDILTVSCGD 289
D+ V IW N++ V TP ++ F V+++SW ++ +CGD
Sbjct: 216 DQTVRIWQEYKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDISWCKKTGLIATACGD 275
Query: 290 NSVSLWKE 297
+ V +++E
Sbjct: 276 DMVRIFRE 283
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 85/312 (27%), Positives = 123/312 (39%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH I D G +LA+ S D TV ++ D S + A L+GH
Sbjct: 54 VLSDGHTRTIRDVAWSPCGRFLASASFDATVAIW---------DRRSGEFECNATLEGHE 104
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEF 125
V V+W+ + G LLA+CS D+ V IW + ++ N H V + W P E
Sbjct: 105 NEVKSVSWS--KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNED 162
Query: 126 GLILACGSSDGTISFLTYMSDT--NSWES-RKIAAHTIGCNAVSWGPGIGSLSEL-DLKG 181
+LA S D TI Y D + W S +A+H ++++ L+ D +
Sbjct: 163 --VLASASYDNTIQL--YREDLADSDWSSFDTLASHDSTVWSIAFDASGSRLASCSDDQT 218
Query: 182 SKLGGVAKRLVSGG--C-DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
++ K G C D +WK T HS V D++W GL
Sbjct: 219 VRIWQEYKPGNEFGVACPDGKTPVWK------CVCTLSGFHSRAVYDISWCKKTGL---- 268
Query: 239 IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWN---------VSWSLT-GDILTVSCG 288
IA+ D V I+ V +P TF+ V V WS T +L +
Sbjct: 269 IATACGDDMVRIFRE---VAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSD 325
Query: 289 DNSVSLWKENTD 300
D V LWK D
Sbjct: 326 DGDVKLWKFEDD 337
Score = 160 (61.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 68/261 (26%), Positives = 108/261 (41%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + ++D + A L
Sbjct: 95 ECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEV----AQEDEYE----CAAVLN 146
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
HS V +V W HP +LAS SYD + ++R D + +W + +HDS+V SIA+
Sbjct: 147 THSQDVKKVEW-HPN-EDVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFD 204
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
G LA S D T+ N + T V G S + D+
Sbjct: 205 AS--GSRLASCSDDQTVRIWQEYKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDISW 262
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN------HSDWVRDVAWAPSWGL 234
K G L++ C D++++I+++ E E HS V W+P+
Sbjct: 263 CKKTG----LIATACGDDMVRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVA- 317
Query: 235 SKCMIASCSQDRKVIIWTSND 255
++ + S D V +W D
Sbjct: 318 --GLLVTTSDDGDVKLWKFED 336
Score = 150 (57.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 38/126 (30%), Positives = 62/126 (49%)
Query: 191 LVSGGCDNLIKIWKQEGD-KWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
L + G D I+IW +G +W+ +T L + H+ +RDVAW+P G +AS S D V
Sbjct: 29 LATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWSPC-GR---FLASASFDATV 84
Query: 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITE 308
IW + ++ V +VSWS +G +L D SV +W+ + ++C
Sbjct: 85 AIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYECAAV 144
Query: 309 MGKTSE 314
+ S+
Sbjct: 145 LNTHSQ 150
Score = 144 (55.7 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 40/123 (32%), Positives = 58/123 (47%)
Query: 55 KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN-GNWF-KYYEYNNHD 112
K TL+ L GH G VW W HP+ +LA+C D+ + IW D G W K + H
Sbjct: 3 KLTLLQCLSGHRGRVWGAGW-HPR-DPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHT 60
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGI 171
++ +AW+P G LA S D T++ S +E + + H +VSW
Sbjct: 61 RTIRDVAWSP--CGRFLASASFDATVAIWDRRS--GEFECNATLEGHENEVKSVSWSKS- 115
Query: 172 GSL 174
G+L
Sbjct: 116 GAL 118
Score = 103 (41.3 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 31/110 (28%), Positives = 57/110 (51%)
Query: 197 DNLIKIWK--QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN 254
D + IW+ QE D++ L HS V+ V W P+ + ++AS S D + ++ +
Sbjct: 125 DKSVWIWEVAQE-DEYECAAVLNTHSQDVKKVEWHPN----EDVLASASYDNTIQLYRED 179
Query: 255 DYVT-WTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLWKENTDG 301
+ W+ F + + D VW++++ +G L SC D+ +V +W+E G
Sbjct: 180 LADSDWSSFDTLASHDSTVWSIAFDASGSRLA-SCSDDQTVRIWQEYKPG 228
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 144 (55.7 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 48 KDDSHSQKGTLIAELKGHS--GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD-NGNWFK 104
K+D ++ K LI ++ + VW +AW HP G +LA+C+ D+ + IW D NG W
Sbjct: 6 KNDKYNLK--LIDSMQKEAPYDKVWNLAW-HPN-GEILATCANDKYIQIWSKDTNGKWGL 61
Query: 105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCN 163
H+ +V +AW+P G LA S D + S D + + HT
Sbjct: 62 VQSLEGHEKTVRRVAWSP--CGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVK 119
Query: 164 AVSW 167
+V+W
Sbjct: 120 SVAW 123
Score = 142 (55.0 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 50/172 (29%), Positives = 76/172 (44%)
Query: 5 LNLVDTGHEDMIHDAEMDYL----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
L L+D+ ++ +D + G LATC++D +++++ D N K L+
Sbjct: 12 LKLIDSMQKEAPYDKVWNLAWHPNGEILATCANDKYIQIWSKDTN--------GKWGLVQ 63
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRG--DNGNWFKYYEYNNHDSSVNSI 118
L+GH V +VAW+ P G LA S+D IW D + H V S+
Sbjct: 64 SLEGHEKTVRRVAWS-P-CGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSV 121
Query: 119 AWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGP 169
AW G +LA S D +I ++ M D N +E I + H V W P
Sbjct: 122 AW--DSTGTLLATCSRDKSI-WIWQMEDDNDFECLSINSGHGQDIKCVLWHP 170
Score = 138 (53.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 38/140 (27%), Positives = 65/140 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + D G LATCS D ++ ++ ++ DD+ + ++ GH +
Sbjct: 113 GHTYEVKSVAWDSTGTLLATCSRDKSIWIWQME-----DDNDFE---CLSINSGHGQDIK 164
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLAS SYD + W+ +G+W H+SS+ +A+ K+ +++
Sbjct: 165 CVLW-HPN-EELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFN-KDGDKLVS 221
Query: 131 CGSSDGTISFLTYMSDTNSW 150
CG D + F + + W
Sbjct: 222 CGE-DKLVLFWKFDKENEKW 240
Score = 133 (51.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 190 RLVSGGC-DNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246
R ++G D IW++ D+ + + LE H+ V+ VAW S G ++A+CS+D+
Sbjct: 82 RFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAW-DSTGT---LLATCSRDK 137
Query: 247 KVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
+ IW D + +N+ + V W ++L S D+++ WK+ DG W+C
Sbjct: 138 SIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKD-IDGDWEC 196
Query: 306 ITEM 309
I +
Sbjct: 197 INTL 200
Score = 132 (51.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 37/116 (31%), Positives = 55/116 (47%)
Query: 197 DNLIKIW-KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SN 254
D I+IW K KW LE H VR VAW+P G +A S D IW S
Sbjct: 45 DKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPC-GR---FLAGASFDASTSIWEKSK 100
Query: 255 DYVTWTPFIM---NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
D + +T +T++ V +V+W TG +L D S+ +W+ D ++C++
Sbjct: 101 DELEFTHVSSLEGHTYE--VKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLS 154
Score = 102 (41.0 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 33/115 (28%), Positives = 54/115 (46%)
Query: 191 LVSGGCDNLIKIWKQ-EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S D+ IK WK +GD W L H + D+A+ G K + SC +D+ V+
Sbjct: 175 LASSSYDDTIKFWKDIDGD-WECINTLTGHESSIWDLAFNKD-G-DK--LVSCGEDKLVL 229
Query: 250 IWT-SNDYVTWTPFIM--NTFDDVVWNVSWS-LTGDILTVSCGDNSVSLWKENTD 300
W + W N ++++ WS LT I+T S D+S+ +++ +D
Sbjct: 230 FWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSA-DDSIIFYEQESD 283
Score = 100 (40.3 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 33/113 (29%), Positives = 54/113 (47%)
Query: 197 DNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255
D I IW+ E D E + + H ++ V W P+ L +AS S D + W D
Sbjct: 136 DKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEEL----LASSSYDDTIKFWKDID 191
Query: 256 YVTWTPFIMNTF---DDVVWNVSWSLTGDILTVSCGDNSVSL-WK-ENTDGAW 303
W +NT + +W+++++ GD L VSCG++ + L WK + + W
Sbjct: 192 G-DWE--CINTLTGHESSIWDLAFNKDGDKL-VSCGEDKLVLFWKFDKENEKW 240
Score = 94 (38.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 190 RLVSGGCDNLIKIWK--QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+LVS G D L+ WK +E +KWI K +N + R + ++ W I + S D
Sbjct: 218 KLVSCGEDKLVLFWKFDKENEKWINIFKFKNENS--RPI-YSIDWSSLTNTIVTGSADDS 274
Query: 248 VIIWT--SNDYVTWTPFIM---NTFDDVVWNVSWSLTGDILTVSCGDNS-VSLWK 296
+I + S+D I+ N D V W+ + SCGD+ + +W+
Sbjct: 275 IIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWE 329
Score = 72 (30.4 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL----EN-HSDWVRDVAWAPSWGLSKCMIASCSQD 245
+V+G D+ I ++QE D ++ K+ +N H V W P + K ++ASC D
Sbjct: 266 IVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKF---KNILASCGDD 322
Query: 246 RKVIIWTSND 255
+ IW D
Sbjct: 323 GFIKIWELQD 332
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 199 (75.1 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 72/247 (29%), Positives = 111/247 (44%)
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
GH V +VAW+ P G LAS S+D IW+ N ++ H++ V +AWAP
Sbjct: 59 GHQRTVRKVAWS-P-CGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPS 116
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGS 182
G +LA S D ++ ++ + + N +E + +HT V W P EL
Sbjct: 117 --GNLLATCSRDKSV-WIWEVDEENEYECVSVVNSHTQDVKHVVWHP----TQEL----- 164
Query: 183 KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242
L S DN + ++K+E D W LE H+ V W ++ S +ASC
Sbjct: 165 --------LASCSYDNNVCVYKEEDDDWECRATLEGHTSTV----WGLTFDPSGQRLASC 212
Query: 243 SQDRKVIIWTS--------NDYVTWTPFI-MNTFDD-VVWNVSWS-LTGDILTVSCGDNS 291
S D V IW W ++ F V++++W LTG + T +CGD+
Sbjct: 213 SDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGALAT-ACGDDG 271
Query: 292 VSLWKEN 298
V ++KE+
Sbjct: 272 VRVFKED 278
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 73/254 (28%), Positives = 107/254 (42%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAW 120
L+GH V VAWA P G LLA+CS D+ V IW D N ++ N+H V + W
Sbjct: 101 LEGHENEVKCVAWA-PS-GNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVW 158
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDL 179
P + L+ +C S D + Y + + WE R + HT + WG L+ D
Sbjct: 159 HPTQ-ELLASC-SYDNNVC--VYKEEDDDWECRATLEGHT----STVWG-----LT-FDP 204
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWK-------QEGDK--WIEETKLEN-HSDWVRDVAWA 229
G +RL S D +KIWK QEG W L H V D+AW
Sbjct: 205 SG-------QRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWC 257
Query: 230 PSWGLSKCMIASCSQDRKVIIWTSNDYV-------TWTPFIMNTFDDVVWNVSWSLTGDI 282
P L+ + +C D V ++ ++ + + + V ++W
Sbjct: 258 P---LTGALATACGDDG-VRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEAG 313
Query: 283 LTVSCGDNS-VSLW 295
L VSC DN +++W
Sbjct: 314 LLVSCSDNGEIAVW 327
Score = 164 (62.8 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 48/155 (30%), Positives = 71/155 (45%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH+ + G YLA+ S D T ++ KK+D + L+GH
Sbjct: 55 VLQDGHQRTVRKVAWSPCGNYLASASFDATTCIWK-----KKNDDFE----CLTVLEGHE 105
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEF 125
V VAWA P G LLA+CS D+ V IW D N ++ N+H V + W P +
Sbjct: 106 NEVKCVAWA-PS-GNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQ- 162
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRK-IAAHT 159
L+ +C S D + Y + + WE R + HT
Sbjct: 163 ELLASC-SYDNNVC--VYKEEDDDWECRATLEGHT 194
Score = 159 (61.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/120 (31%), Positives = 65/120 (54%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S G D I+IW +EGD W +T L++ H VR VAW+P +AS S D
Sbjct: 31 LASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNY----LASASFDATTC 86
Query: 250 IWT--SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
IW ++D+ T ++ ++ V V+W+ +G++L D SV +W+ + + ++C++
Sbjct: 87 IWKKKNDDFECLT--VLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVS 144
Score = 154 (59.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/146 (30%), Positives = 73/146 (50%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D T++++ ++ DS K T++ + GH V +VAW+ P G LA
Sbjct: 28 GTLLASCGGDRTIRIWG-----REGDSWECK-TVLQD--GHQRTVRKVAWS-P-CGNYLA 77
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
S S+D IW+ N ++ H++ V +AWAP G +LA S D ++ ++ +
Sbjct: 78 SASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPS--GNLLATCSRDKSV-WIWEV 134
Query: 145 SDTNSWESRKIA-AHTIGCNAVSWGP 169
+ N +E + +HT V W P
Sbjct: 135 DEENEYECVSVVNSHTQDVKHVVWHP 160
Score = 140 (54.3 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 57/248 (22%), Positives = 103/248 (41%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V ++ +D +++ + ++ + H+ V
Sbjct: 103 GHENEVKCVAWAPSGNLLATCSRDKSVWIWEVD----EENEYE----CVSVVNSHTQDVK 154
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLASCSYD V +++ ++ +W H S+V + + P G LA
Sbjct: 155 HVVW-HPT-QELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPS--GQRLA 210
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR 190
S D T+ E A + C G + D+ L G
Sbjct: 211 SCSDDCTVKIWKECQPEGGQEGTDAAWKCV-CTL----SGFHGRTVYDIAWCPLTGA--- 262
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-------ENHSDWVRDVAWAPSWGLSKCMIASCS 243
L + D+ ++++K++ ++ + H+ V +AW P ++ SCS
Sbjct: 263 LATACGDDGVRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPK---EAGLLVSCS 319
Query: 244 QDRKVIIW 251
+ ++ +W
Sbjct: 320 DNGEIAVW 327
Score = 138 (53.6 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 43/143 (30%), Positives = 63/143 (44%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSGPV 69
GH + D G LA+CS D TVK++ + + + L G H V
Sbjct: 192 GHTSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTV 251
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGD-----NGNWFKYYEY--NNHDSSVNSIAWAP 122
+ +AW P G L +C D V +++ D + F + H VN IAW P
Sbjct: 252 YDIAWC-PLTGALATACG-DDGVRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHP 309
Query: 123 KEFGLILACGSSDGTISFLTYMS 145
KE GL+++C S +G I+ Y S
Sbjct: 310 KEAGLLVSC-SDNGEIAVWNYQS 331
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 197 DNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255
D + IW+ + + E + N H+ V+ V W P+ L +ASCS D V ++ D
Sbjct: 126 DKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQEL----LASCSYDNNVCVYKEED 181
Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLWKE--------NTDGAWQCI 306
+ VW +++ +G L SC D+ +V +WKE TD AW+C+
Sbjct: 182 DDWECRATLEGHTSTVWGLTFDPSGQRLA-SCSDDCTVKIWKECQPEGGQEGTDAAWKCV 240
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 196 (74.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 69/248 (27%), Positives = 114/248 (45%)
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
+GH V +V+W+ P G LAS S+D IW + H++ V S+AWAP
Sbjct: 58 EGHQRTVRKVSWS-P-CGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAP 115
Query: 123 KEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKG 181
G +LA S D ++ ++ + + +E + +HT V W P EL
Sbjct: 116 S--GSLLATCSRDKSV-WVWEVDEEEEYECVSVLNSHTQDVKHVVWHPN----QEL---- 164
Query: 182 SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241
L S D+ +K++++E D W+ LE H+ V W+ ++ + +A+
Sbjct: 165 ---------LASASYDDSVKLYREEEDDWVCCATLEGHTSTV----WSLAFDQTGEQLAT 211
Query: 242 CSQDRKVIIWT--------SNDYVTWTPFIMNT--FDDVVWNVSWS-LTGDILTVSCGDN 290
CS D+ V IW S W T V++V+W+ LTG I T +CGD+
Sbjct: 212 CSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIAT-ACGDD 270
Query: 291 SVSLWKEN 298
+V +++E+
Sbjct: 271 AVRIFEED 278
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 39/125 (31%), Positives = 65/125 (52%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D IW ++ +++ T LE H + V+ VAWAPS L +A+CS+D+ V +
Sbjct: 76 LASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSL----LATCSRDKSVWV 131
Query: 251 WTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
W ++ + ++N+ V +V W ++L + D+SV L++E D W C +
Sbjct: 132 WEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREEEDD-WVCCATL 190
Query: 310 -GKTS 313
G TS
Sbjct: 191 EGHTS 195
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 65/249 (26%), Positives = 108/249 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V V+ +D +++ + ++ L H+ V
Sbjct: 103 GHENEVKSVAWAPSGSLLATCSRDKSVWVWEVD----EEEEYE----CVSVLNSHTQDVK 154
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLAS SYD V ++R + +W H S+V S+A+ + G LA
Sbjct: 155 HVVW-HPN-QELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAF--DQTGEQLA 210
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR 190
S D T+ + T S+ C G + + D+ + L G
Sbjct: 211 TCSDDKTVRIWRQLG-TGEQGSKSDPNWKCVCTLT----GYHTRTVYDVNWNHLTGA--- 262
Query: 191 LVSGGC-DNLIKIWKQE-GDKWIEET-KL-----ENHSDWVRDVAWAPSWGLSKCMIASC 242
++ C D+ ++I++++ G ++ T L H+ V V W P ++ASC
Sbjct: 263 -IATACGDDAVRIFEEDPGSDPLQPTFSLTAHMPRAHTQDVNCVTWHPK---EPNLLASC 318
Query: 243 SQDRKVIIW 251
S D ++ W
Sbjct: 319 SDDGEMAFW 327
Score = 150 (57.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 42/146 (28%), Positives = 67/146 (45%)
Query: 6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH 65
+++ GH+ + G YLA+ S D T ++ +KK + I L+GH
Sbjct: 54 SVLGEGHQRTVRKVSWSPCGNYLASASFDATTCIW-----MKKKEEFE----CITTLEGH 104
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKE 124
V VAWA P G+LLA+CS D+ V +W D ++ N+H V + W P +
Sbjct: 105 ENEVKSVAWA-PS-GSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQ 162
Query: 125 FGLILACGSSDGTISFLTYMSDTNSW 150
+LA S D ++ Y + + W
Sbjct: 163 E--LLASASYDDSVKL--YREEEDDW 184
Score = 149 (57.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 34/125 (27%), Positives = 62/125 (49%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S G D I+IW ++GD W+ ++ L E H VR V+W+P +AS S D
Sbjct: 31 LASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNY----LASASFDATTC 86
Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
IW + ++ V +V+W+ +G +L D SV +W+ + + ++C++ +
Sbjct: 87 IWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSVL 146
Query: 310 GKTSE 314
++
Sbjct: 147 NSHTQ 151
Score = 146 (56.5 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 41/121 (33%), Positives = 56/121 (46%)
Query: 57 TLIAELKGH-SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHDSS 114
TL++ + H W +AW +P GTLLASC DR + IW D NW K H +
Sbjct: 6 TLLSRVSAHPDSRCWFLAW-NPS-GTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRT 63
Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGIGS 173
V ++W+P G LA S D T +M +E + H +V+W P GS
Sbjct: 64 VRKVSWSP--CGNYLASASFDATTCI--WMKKKEEFECITTLEGHENEVKSVAWAPS-GS 118
Query: 174 L 174
L
Sbjct: 119 L 119
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/146 (29%), Positives = 67/146 (45%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D T++++ D D+ K L E GH V +V+W+ P G LA
Sbjct: 28 GTLLASCGGDRTIRIWGKD-----GDNWVCKSVL-GE--GHQRTVRKVSWS-P-CGNYLA 77
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
S S+D IW + H++ V S+AWAP G +LA S D ++ ++ +
Sbjct: 78 SASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPS--GSLLATCSRDKSV-WVWEV 134
Query: 145 SDTNSWESRKIA-AHTIGCNAVSWGP 169
+ +E + +HT V W P
Sbjct: 135 DEEEEYECVSVLNSHTQDVKHVVWHP 160
Score = 97 (39.2 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 29/121 (23%), Positives = 58/121 (47%)
Query: 197 DNLIKIWKQEGDKWIE-ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS-- 253
D + +W+ + ++ E + L +H+ V+ V W P+ L +AS S D V ++
Sbjct: 126 DKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQEL----LASASYDDSVKLYREEE 181
Query: 254 NDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE--------NTDGAWQC 305
+D+V +T VW++++ TG+ L D +V +W++ +D W+C
Sbjct: 182 DDWVCCATLEGHT--STVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKC 239
Query: 306 I 306
+
Sbjct: 240 V 240
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 151 (58.2 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 65/262 (24%), Positives = 113/262 (43%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + +V W+ P G LAS S+D IW N H++ V
Sbjct: 52 TILSD--GHKRTIREVRWS-P-CGEYLASASFDATTAIWSKHECN----ATLEGHENEVK 103
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + AHT V W P
Sbjct: 104 SVSWS-QSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNAHTQDVKRVVWHPS----K 156
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWG 233
E+ L S DN IK++ + W L +H+ V W+ +
Sbjct: 157 EI-------------LASASYDNTIKMYAESALDSDWDCTATLSSHTSTV----WSIDFE 199
Query: 234 LSKCMIASCSQDRKVIIWTS----NDYVTWTP----------FIMNTFDDVVWNVSW-SL 278
+ SCS D + IW + N+ TP + V++VSW L
Sbjct: 200 ADGERLVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVWKCVCTVAGQHSRAVYDVSWCKL 259
Query: 279 TGDILTVSCGDNSVSLWKENTD 300
TG ++ +CGD+ + ++KE++D
Sbjct: 260 TG-LIASACGDDGIRIFKESSD 280
Score = 145 (56.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 47/156 (30%), Positives = 70/156 (44%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH+ I + G YLA+ S D T +++ H TL +GH
Sbjct: 53 ILSDGHKRTIREVRWSPCGEYLASASFDATTAIWS---------KHECNATL----EGHE 99
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAP-KE 124
V V+W+ Q G LLA+CS D+ V IW + F+ N H V + W P KE
Sbjct: 100 NEVKSVSWS--QSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKE 157
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHT 159
ILA S D TI + + W+ + +++HT
Sbjct: 158 ---ILASASYDNTIKMYAESALDSDWDCTATLSSHT 190
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 176 ELDLKGSK--LGGVA-----KRLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA S G D I+IW Q G+ W +T L + H +R+V
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P +AS S D IW+ ++ + ++ V +VSWS +G +L
Sbjct: 67 WSPCGEY----LASASFDATTAIWSKHECNA----TLEGHENEVKSVSWSQSGGLLATCS 118
Query: 288 GDNSVSLWKENTDGAWQC 305
D SV +W+ D ++C
Sbjct: 119 RDKSVWIWEVAGDDEFEC 136
Score = 140 (54.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 39/123 (31%), Positives = 56/123 (45%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G ASC D+ + IW W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG 172
++ + W+P G LA S D T + + + N+ + H +VSW G
Sbjct: 60 RTIREVRWSP--CGEYLASASFDATTAIWS-KHECNA----TLEGHENEVKSVSWSQSGG 112
Query: 173 SLS 175
L+
Sbjct: 113 LLA 115
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 68/258 (26%), Positives = 104/258 (40%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 90 ECNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 141
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + ++ + +W ++H S+V SI +
Sbjct: 142 AHTQDVKRVVW-HPS-KEILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFE 199
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
L+ +C S D T+ N T+ V G S + D+
Sbjct: 200 ADGERLV-SC-SDDTTLKIWRAYHPGNEAGIATPDKTTVW-KCVCTVAGQHSRAVYDVSW 256
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLE-------NHSDWVRDVAWAPSWG 233
KL G L++ C D+ I+I+K+ D +E E H V V W P
Sbjct: 257 CKLTG----LIASACGDDGIRIFKESSDSKRDEPTFELLTAEESAHEQDVNAVEWNP--- 309
Query: 234 LSKCMIASCSQDRKVIIW 251
++ + SCS D + IW
Sbjct: 310 VTAGQLISCSDDGTIKIW 327
Score = 114 (45.2 bits), Expect = 0.00053, P = 0.00053
Identities = 40/159 (25%), Positives = 68/159 (42%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I G A+C D +++++ N + + K T++++ GH +
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGN-----TWTTK-TILSD--GHKRTIR 63
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
+V W+ P G LAS S+D IW N H++ V S++W+ + GL+
Sbjct: 64 EVRWS-P-CGEYLASASFDATTAIWSKHECN----ATLEGHENEVKSVSWS-QSGGLLAT 116
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169
C S D ++ D + + AHT V W P
Sbjct: 117 C-SRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHP 154
Score = 101 (40.6 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 182 SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIA 240
S+ GG+ L + D + IW+ GD E + N H+ V+ V W PS K ++A
Sbjct: 108 SQSGGL---LATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPS----KEILA 160
Query: 241 SCSQDRKVIIWTSNDYVT-WT-PFIMNTFDDVVWNVSWSLTGDILTVSCGDNS-VSLWKE 297
S S D + ++ + + W +++ VW++ + G+ L VSC D++ + +W+
Sbjct: 161 SASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFEADGERL-VSCSDDTTLKIWRA 219
Query: 298 NTDGAWQCITEMGKTS 313
G I KT+
Sbjct: 220 YHPGNEAGIATPDKTT 235
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 192 (72.6 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 73/254 (28%), Positives = 113/254 (44%)
Query: 59 IAELKGHSGPVWQVAW----AHPQ-FGTLLASCSYDRKVIIWRGDN--GNWF-KYYEYNN 110
I +L+GH+ VW VAW +H +LASCS D V IW + +W K
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 111 HDSSVNSIAWAPKEFGLILACGSSDGTIS-FLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169
H +V S AW+P G +LA S DGT + Y S+ + + H +VSW
Sbjct: 73 HTRTVRSCAWSPS--GQLLATASFDGTTGIWKNYGSEFECIST--LEGHENEVKSVSW-- 126
Query: 170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ-EGDKWIEETKLENHSDWVRDVAW 228
+ GS L ++ D + IW+ EG+++ L H+ V+ V W
Sbjct: 127 --------NASGSCLATCSR-------DKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQW 171
Query: 229 APSWGLSKCMIASCSQDRKVIIWTSND----Y--VTWTPFIMNTFDDVVWNVSWSLTGDI 282
P+ + + SCS D + +W S D Y V N VW++S++ GD
Sbjct: 172 HPTMDV----LFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDK 227
Query: 283 LTVSCGDN-SVSLW 295
+ V+C D+ ++ +W
Sbjct: 228 M-VTCSDDLTLKIW 240
Score = 175 (66.7 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 77/307 (25%), Positives = 138/307 (44%)
Query: 28 LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87
LA+CS D+TV+++ +L + S + K T++ E H+ V AW+ P G LLA+ S
Sbjct: 42 LASCSGDNTVRIWE-QSSLSR--SWTCK-TVLEET--HTRTVRSCAWS-PS-GQLLATAS 93
Query: 88 YDRKVIIWRGDNGNWFKYYE-YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSD 146
+D IW+ + G+ F+ H++ V S++W G LA S D ++ ++ + +
Sbjct: 94 FDGTTGIWK-NYGSEFECISTLEGHENEVKSVSWNAS--GSCLATCSRDKSV-WIWEVLE 149
Query: 147 TNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ 205
N ++ + HT V W P +D+ L S DN IK+W
Sbjct: 150 GNEYDCAAVLTGHTQDVKMVQWHP------TMDV-----------LFSCSYDNTIKVWWS 192
Query: 206 E---GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW--------TSN 254
E G+ +T E+++ V W+ S+ + + +CS D + IW +
Sbjct: 193 EDDDGEYQCVQTLGESNNGHSSTV-WSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGE 251
Query: 255 DYVTWTPF--IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW----KENTDG-AWQCIT 307
+Y W + D +++ WS DI+ GDN++ L+ ++ DG ++ +
Sbjct: 252 EYAPWIHLCTLSGYHDRTIYSAHWS-RDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLL 310
Query: 308 EMGKTSE 314
+ K E
Sbjct: 311 KKNKAHE 317
Score = 165 (63.1 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 57/211 (27%), Positives = 91/211 (43%)
Query: 111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS---WESRKIAAHTIGCNAVSW 167
H V S+AW P +DG L S N+ WE ++ + C V
Sbjct: 19 HTDRVWSVAWNP-------VSSHADGVSPILASCSGDNTVRIWEQSSLS-RSWTCKTV-- 68
Query: 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVA 227
+ ++ + L + D IWK G ++ + LE H + V+ V+
Sbjct: 69 ---LEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVS 125
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWT---SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILT 284
W S C+ A+CS+D+ V IW N+Y +T D V V W T D+L
Sbjct: 126 WNAS---GSCL-ATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQD--VKMVQWHPTMDVL- 178
Query: 285 VSCG-DNSVSLW-KENTDGAWQCITEMGKTS 313
SC DN++ +W E+ DG +QC+ +G+++
Sbjct: 179 FSCSYDNTIKVWWSEDDDGEYQCVQTLGESN 209
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 47/168 (27%), Positives = 75/168 (44%)
Query: 151 ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--D 208
E +K+ HT +V+W P + S ++ GV+ L S DN ++IW+Q
Sbjct: 12 EIQKLEGHTDRVWSVAWNP-VSSHAD---------GVSPILASCSGDNTVRIWEQSSLSR 61
Query: 209 KWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF 267
W +T LE H+ VR AW+PS L +A+ S D IW + +
Sbjct: 62 SWTCKTVLEETHTRTVRSCAWSPSGQL----LATASFDGTTGIWKNYGSEFECISTLEGH 117
Query: 268 DDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM-GKTSE 314
++ V +VSW+ +G L D SV +W+ + C + G T +
Sbjct: 118 ENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQD 165
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 211 IEETKLENHSDWVRDVAWAP----SWGLSKCMIASCSQDRKVIIWTSNDYV-TWT--PFI 263
+E KLE H+D V VAW P + G+S ++ASCS D V IW + +WT +
Sbjct: 11 VEIQKLEGHTDRVWSVAWNPVSSHADGVSP-ILASCSGDNTVRIWEQSSLSRSWTCKTVL 69
Query: 264 MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM-GKTSEQRAM 318
T V + +WS +G +L + D + +WK N ++CI+ + G +E +++
Sbjct: 70 EETHTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTLEGHENEVKSV 124
Score = 134 (52.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 72/264 (27%), Positives = 113/264 (42%)
Query: 3 SQLNLVDT--GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
S+ + T GHE+ + + G LATCS D +V ++ + + D + A
Sbjct: 106 SEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCA--------A 157
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW--RGDNGNWFKYY---EYNN-HDSS 114
L GH+ V V W HP L SCSYD + +W D+G + E NN H S+
Sbjct: 158 VLTGHTQDVKMVQW-HPTMDVLF-SCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSST 215
Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL 174
V SI++ ++ C S D T+ + +D +S + A I +S G
Sbjct: 216 VWSISFNAAGDKMV-TC-SDDLTLKI--WGTDIAKMQSGEEYAPWIHLCTLS---GYHDR 268
Query: 175 SELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ------EGDKW-IEETKLENHSDWVRDVA 227
+ S+ +A SG DN I+++ +G + + K + H + V V
Sbjct: 269 TIYSAHWSRDDIIA----SGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQ 324
Query: 228 WAPSWGLSKCMIASCSQDRKVIIW 251
W+P G ++AS S D V IW
Sbjct: 325 WSPGEG--NRLLASASDDGMVKIW 346
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 55/211 (26%), Positives = 88/211 (41%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGH + + L +CS D+T+KV+ + + D + TL GHS V
Sbjct: 160 TGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDD---DGEYQCVQTLGESNNGHSSTV 216
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGD-----NGN----WFKYYEYNN-HDSSVNSIA 119
W +++ G + +CS D + IW D +G W + HD ++ S
Sbjct: 217 WSISFNAA--GDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAH 274
Query: 120 WAPKEFGLILACGSSDGTIS-FLTYMSDTNSWES-----RKIAAHTIGCNAVSWGPGIGS 173
W+ + I+A G+ D I F+ D+ S +K AH N+V W PG
Sbjct: 275 WSRDD---IIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPG--- 328
Query: 174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWK 204
+G++L L S D ++KIW+
Sbjct: 329 ------EGNRL------LASASDDGMVKIWQ 347
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 184 (69.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 65/228 (28%), Positives = 102/228 (44%)
Query: 80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS 139
G LAS S+D IW+ N ++ H++ V +AWAP G LA S D ++
Sbjct: 73 GNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPS--GNQLATCSRDKSV- 129
Query: 140 FLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN 198
++ + + + +E + +HT V W P EL L S DN
Sbjct: 130 WIWEVDEEDEYECVSVVNSHTQDVKHVVWHP----TQEL-------------LASCSYDN 172
Query: 199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS----- 253
+ ++K+E D W LE H+ V W ++ S +ASCS DR V IW
Sbjct: 173 NVCVYKEEDDDWECRATLEGHTSTV----WGLTFDPSGQRLASCSDDRTVKIWKECQPGG 228
Query: 254 NDYVTWTPFI-MNTFDD-VVWNVSWS-LTGDILTVSCGDNSVSLWKEN 298
W ++ F V++++W LTG + T +CGD+ V ++KE+
Sbjct: 229 GQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALAT-ACGDDGVRVFKED 275
Score = 166 (63.5 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 68/256 (26%), Positives = 107/256 (41%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAW 120
L+GH V VAWA P G LA+CS D+ V IW D + ++ N+H V + W
Sbjct: 101 LEGHENEVKCVAWA-PS-GNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVW 158
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDL 179
P + L+ +C S D + Y + + WE R + HT + WG L+ D
Sbjct: 159 HPTQ-ELLASC-SYDNNVC--VYKEEDDDWECRATLEGHT----STVWG-----LT-FDP 204
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQ------EGDKWIEETKLEN-HSDWVRDVAWAPSW 232
G +RL S D +KIWK+ + W L H V D+AW P
Sbjct: 205 SG-------QRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCP-- 255
Query: 233 GLSKCMIASCSQDRKVIIWTSNDYV-------TWTPFIMNTFDDVVWNVSWSLTGDILTV 285
L+ + +C D V ++ ++ + + + V ++W L V
Sbjct: 256 -LTGALATACGDDG-VRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLV 313
Query: 286 SCGDNS-VSLWKENTD 300
SC DN +++W ++
Sbjct: 314 SCSDNGEIAVWNYQSE 329
Score = 161 (61.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 45/126 (35%), Positives = 67/126 (53%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D IWK++ D + T LE H + V+ VAWAPS +A+CS+D+ V I
Sbjct: 76 LASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGN----QLATCSRDKSVWI 131
Query: 251 WTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGAWQC-IT 307
W ++ + ++N+ V +V W T ++L SC DN+V ++KE D W+C T
Sbjct: 132 WEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLA-SCSYDNNVCVYKEEDDD-WECRAT 189
Query: 308 EMGKTS 313
G TS
Sbjct: 190 LEGHTS 195
Score = 153 (58.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 46/155 (29%), Positives = 70/155 (45%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH+ + G YLA+ S D T ++ KK+D + L+GH
Sbjct: 55 VLQDGHQRAVRKVAWSPCGNYLASASFDATTCIWK-----KKNDDFE----CLTVLEGHE 105
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEF 125
V VAWA P G LA+CS D+ V IW D + ++ N+H V + W P +
Sbjct: 106 NEVKCVAWA-PS-GNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQ- 162
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRK-IAAHT 159
L+ +C S D + Y + + WE R + HT
Sbjct: 163 ELLASC-SYDNNVC--VYKEEDDDWECRATLEGHT 194
Score = 152 (58.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S G D I+IW +EGD W +T L++ H VR VAW+P +AS S D
Sbjct: 31 LASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNY----LASASFDATTC 86
Query: 250 IWT--SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
IW ++D+ T ++ ++ V V+W+ +G+ L D SV +W+ + + ++C++
Sbjct: 87 IWKKKNDDFECLT--VLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVS 144
Score = 144 (55.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 43/144 (29%), Positives = 64/144 (44%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSGPV 69
GH + D G LA+CS D TVK++ + + + L G H V
Sbjct: 192 GHTSTVWGLTFDPSGQRLASCSDDRTVKIW---KECQPGGGQDTAWKCVCTLSGFHGRTV 248
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGD-----NGNWFKYYEY--NNHDSSVNSIAWAP 122
+ +AW P G L +C D V +++ D + F + H VN IAW P
Sbjct: 249 YDIAWC-PLTGALATACG-DDGVRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHP 306
Query: 123 KEFGLILACGSSDGTISFLTYMSD 146
KE GL+++C S +G I+ Y S+
Sbjct: 307 KEAGLLVSC-SDNGEIAVWNYQSE 329
Score = 142 (55.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 60/249 (24%), Positives = 104/249 (41%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V ++ +D ++D + ++ + H+ V
Sbjct: 103 GHENEVKCVAWAPSGNQLATCSRDKSVWIWEVD----EEDEYE----CVSVVNSHTQDVK 154
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLASCSYD V +++ ++ +W H S+V + + P G LA
Sbjct: 155 HVVW-HPT-QELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPS--GQRLA 210
Query: 131 CGSSDGTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
S D T+ W E + V G + D+ L G
Sbjct: 211 SCSDDRTVKI---------WKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGA-- 259
Query: 190 RLVSGGCDNLIKIWKQEG----DKWIEETKL---ENHSDWVRDVAWAPSWGLSKCMIASC 242
L + D+ ++++K++ D+ + + HS V +AW P ++ SC
Sbjct: 260 -LATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPK---EAGLLVSC 315
Query: 243 SQDRKVIIW 251
S + ++ +W
Sbjct: 316 SDNGEIAVW 324
Score = 139 (54.0 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D ++++ ++ DS K T++ + GH V +VAW+ P G LA
Sbjct: 28 GTLLASCGGDRAIRIWG-----REGDSWECK-TVLQD--GHQRAVRKVAWS-P-CGNYLA 77
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
S S+D IW+ N ++ H++ V +AWAP G LA S D ++ ++ +
Sbjct: 78 SASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPS--GNQLATCSRDKSV-WIWEV 134
Query: 145 SDTNSWESRKIA-AHTIGCNAVSWGP 169
+ + +E + +HT V W P
Sbjct: 135 DEEDEYECVSVVNSHTQDVKHVVWHP 160
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 197 DNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255
D + IW+ E D++ + + +H+ V+ V W P+ L +ASCS D V ++ D
Sbjct: 126 DKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQEL----LASCSYDNNVCVYKEED 181
Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLWKE-----NTDGAWQCI 306
+ VW +++ +G L SC D+ +V +WKE D AW+C+
Sbjct: 182 DDWECRATLEGHTSTVWGLTFDPSGQRLA-SCSDDRTVKIWKECQPGGGQDTAWKCV 237
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 184 (69.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 65/229 (28%), Positives = 105/229 (45%)
Query: 80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS 139
G LAS S+D IW+ + ++ H++ V +AWAP G +LA S D ++
Sbjct: 73 GKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPS--GSLLATCSRDKSV- 129
Query: 140 FLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN 198
++ + + + +E + +HT V W P EL L S DN
Sbjct: 130 WIWEVDEEDEYECLSVVNSHTQDVKHVVWHP----TQEL-------------LASASYDN 172
Query: 199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW---TSND 255
I I+K+E D W LE H V W+ ++ +ASCS DR V IW T+ D
Sbjct: 173 KICIYKEEDDDWECRATLEGHESTV----WSLTFDPEGRRLASCSDDRTVKIWKESTTGD 228
Query: 256 YVT---WTPFI-MNTFDD-VVWNVSWS-LTGDILTVSCGDNSVSLWKEN 298
+ W ++ F +++++W LTG + T +CGD+ V ++ E+
Sbjct: 229 GSSDESWKCICTLSGFHGRTIYDIAWCRLTGALAT-ACGDDGVRVFSED 276
Score = 157 (60.3 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K L S D IWK+ + + T LE H + V+ VAWAPS L +A+CS+D+ V
Sbjct: 74 KYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSL----LATCSRDKSV 129
Query: 249 IIWTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
IW ++ + ++N+ V +V W T ++L + DN + ++KE D W+C
Sbjct: 130 WIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIYKEEDDD-WEC 186
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/148 (31%), Positives = 69/148 (46%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH+ + G YLA+ S D T ++ KK D + T+ L+GH
Sbjct: 55 VLSDGHQRTVRKVAWSPCGKYLASASFDATTCIW------KKTDEDFECLTV---LEGHE 105
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEF 125
V VAWA P G+LLA+CS D+ V IW D + ++ N+H V + W P +
Sbjct: 106 NEVKCVAWA-PS-GSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQE 163
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESR 153
+LA S D I Y + + WE R
Sbjct: 164 --LLASASYDNKICI--YKEEDDDWECR 187
Score = 150 (57.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 38/120 (31%), Positives = 62/120 (51%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L + G D I+IW +EGD W + L + H VR VAW+P K +AS S D
Sbjct: 31 LATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWSPC---GK-YLASASFDATTC 86
Query: 250 IW--TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
IW T D+ T ++ ++ V V+W+ +G +L D SV +W+ + + ++C++
Sbjct: 87 IWKKTDEDFECLT--VLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLS 144
Score = 144 (55.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 64/253 (25%), Positives = 112/253 (44%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V ++ +D ++D + ++ + H+ V
Sbjct: 103 GHENEVKCVAWAPSGSLLATCSRDKSVWIWEVD----EEDEYE----CLSVVNSHTQDVK 154
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLAS SYD K+ I++ ++ +W H+S+V S+ + P+ G LA
Sbjct: 155 HVVW-HPT-QELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPE--GRRLA 210
Query: 131 CGSSDGTISFL--TYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVA 188
S D T+ + D +S ES K T+ G + D+ +L G
Sbjct: 211 SCSDDRTVKIWKESTTGDGSSDESWKCIC-TLS--------GFHGRTIYDIAWCRLTGA- 260
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKL-------ENHSDWVRDVAWAPSWGLSKCMIAS 241
L + D+ ++++ ++ E+ + H+ V V+W P ++A+
Sbjct: 261 --LATACGDDGVRVFSEDPTADPEQPIFALSAHVPKAHNQDVNCVSWNPK---EAGLLAT 315
Query: 242 CSQDRKVIIWTSN 254
CS + + IW N
Sbjct: 316 CSDNGEFAIWKYN 328
Score = 141 (54.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 43/146 (29%), Positives = 69/146 (47%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LATC D ++++ K+ DS K L GH V +VAW+ P G LA
Sbjct: 28 GTTLATCGGDRAIRIWG-----KEGDSWECKCVLS---DGHQRTVRKVAWS-P-CGKYLA 77
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
S S+D IW+ + ++ H++ V +AWAP G +LA S D ++ ++ +
Sbjct: 78 SASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPS--GSLLATCSRDKSV-WIWEV 134
Query: 145 SDTNSWESRKIA-AHTIGCNAVSWGP 169
+ + +E + +HT V W P
Sbjct: 135 DEEDEYECLSVVNSHTQDVKHVVWHP 160
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 197 DNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255
D + IW+ E D++ + + +H+ V+ V W P+ L +AS S D K+ I+ D
Sbjct: 126 DKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQEL----LASASYDNKICIYKEED 181
Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLWKENTDG------AWQCI 306
+ + VW++++ G L SC D+ +V +WKE+T G +W+CI
Sbjct: 182 DDWECRATLEGHESTVWSLTFDPEGRRLA-SCSDDRTVKIWKESTTGDGSSDESWKCI 238
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 172 (65.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 75/307 (24%), Positives = 130/307 (42%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGH + A G A+C D T++V+N K D T++ + GH+ +
Sbjct: 11 TGHAGRVWSAAWHPGGKLFASCGEDKTIRVWN-----KSDTDRWVAQTVLTD--GHTRTI 63
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++AW+ G LAS S+D V +W +G + HD+ V S+ W+ G +L
Sbjct: 64 RELAWSC--CGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRS--GNLL 119
Query: 130 ACGSSDGTISF--LTYMSDT-NSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLG 185
A S D ++ + + D + +E + HT V W P + DL
Sbjct: 120 ATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHP------QEDL------ 167
Query: 186 GVAKRLVSGGCDNLIKIWKQE-GD-KWIEETKLENHSDWVRDVAW-APSWGLSKCM---- 238
L S DN I++++Q+ D +W LE+HS V +++ A L+ C
Sbjct: 168 -----LASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTT 222
Query: 239 IASCSQ---DRKVIIWTSNDYVTWTPF--IMNTFDDVVWNVSWSLTGDILTVSCGDNSVS 293
+ Q D + I + W + V+++ W +L +CGD++V
Sbjct: 223 VKVWQQYGPDNALGIPCPDRGTIWKCVCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVR 282
Query: 294 LWKENTD 300
+++E +D
Sbjct: 283 IFREASD 289
Score = 169 (64.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 71/258 (27%), Positives = 111/258 (43%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GH++ + G LATCS D +V ++ + ++D + +A L
Sbjct: 95 ECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPDQEDEYE----CVAVLN 150
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
GH+ V +V W HPQ LLAS SYD + ++R D + W +H S+V SI++
Sbjct: 151 GHTQDVKKVCW-HPQ-EDLLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFD 208
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
G LA S D T+ N+ TI V G S S D+
Sbjct: 209 AT--GQRLASCSEDTTVKVWQQYGPDNALGIPCPDRGTIW-KCVCTLSGYHSRSVYDIDW 265
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEE------TKLENHSDWVRDVAWAPSW-G 233
K G L++ C D+ ++I+++ D E +E HS VAW P+ G
Sbjct: 266 CKQTG----LLATACGDDTVRIFREASDSDRNEPTFELVVTVEAHSQDANKVAWHPTVPG 321
Query: 234 LSKCMIASCSQDRKVIIW 251
L + + S D ++ +W
Sbjct: 322 L----LLTASDDGEIKLW 335
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 185 GGVAKRLVSGGCDNLIKIW-KQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKC--MIA 240
GG K S G D I++W K + D+W+ +T L + H+ +R++AW S C +A
Sbjct: 25 GG--KLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAW------SCCGHYLA 76
Query: 241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK---- 296
S S D V +W + D+ V +V+WS +G++L D SV +W+
Sbjct: 77 SASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHA 136
Query: 297 ENTDGAWQCITEM-GKTSE 314
+ + ++C+ + G T +
Sbjct: 137 PDQEDEYECVAVLNGHTQD 155
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/113 (29%), Positives = 53/113 (46%)
Query: 58 LIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW-RGDNGNWFKYYEYNN-HDSSV 115
L+ L GH+G VW AW HP G L ASC D+ + +W + D W + H ++
Sbjct: 6 LLQTLTGHAGRVWSAAW-HPG-GKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTI 63
Query: 116 NSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSW 167
+AW+ G LA S D T++ + + +E + + H +V+W
Sbjct: 64 RELAWSC--CGHYLASASFDTTVA--VWDKKSGEFECNATLEGHDNEVKSVTW 112
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 170 (64.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 72/279 (25%), Positives = 122/279 (43%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + ++ W+ P G LAS S+D IW +G + H++ V
Sbjct: 52 TILSD--GHKRTIREIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVK 107
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + AHT V W P
Sbjct: 108 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNAHTQDVKRVVWHP------ 158
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIW--KQEGDKWIEETKLENHSDWVRDVAWAPSWG 233
D+ L S DN IK++ Q W L +H+ V W+ +
Sbjct: 159 TKDI-----------LASASYDNTIKMFAESQLDSDWDCTATLSSHTSTV----WSIDFD 203
Query: 234 LSKCMIASCSQDRKVIIWTS----NDYVTWTPFIMNTFDDV----------VWNVSW-SL 278
+ SCS D+ + IW + ND TP + + V +++VSW L
Sbjct: 204 AEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKL 263
Query: 279 TGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRA 317
TG I T CGD+ + ++KE +D T T+E+ A
Sbjct: 264 TGLIAT-GCGDDGIRIFKETSDSKRDEPTFEQLTAEETA 301
Score = 148 (57.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 39/124 (31%), Positives = 58/124 (46%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G + ASC D+ + +W W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGI 171
++ I W+P G LA S D T + + + +E + + H +VSW
Sbjct: 60 RTIREIRWSP--CGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSG 115
Query: 172 GSLS 175
G L+
Sbjct: 116 GLLA 119
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 76/306 (24%), Positives = 122/306 (39%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
S ++ GH+ I + G YLA+ S D T +++ K + A L
Sbjct: 49 STKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWS------KSSGEFECN---ATL 99
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWA 121
+GH V V+W+ G LLA+CS D+ V IW + F+ N H V + W
Sbjct: 100 EGHENEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWH 157
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSW-GPGIGSLSELDL 179
P + ILA S D TI + W+ + +++HT ++ + G +S D
Sbjct: 158 PTKD--ILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDD 215
Query: 180 KGSKLGGVAKRLVSGGCD-NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
K K+ R G D + KQ K + T HS + DV+W GL
Sbjct: 216 KTLKIW----RAYHPGNDAGIATPDKQSVWKCVC-TLSGQHSRAIYDVSWCKLTGL--IA 268
Query: 239 IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWN-----VSWS--LTGDILTVSCGDN- 290
++ TS+ F T ++ V W+ + G + +SC D+
Sbjct: 269 TGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQL--ISCSDDG 326
Query: 291 SVSLWK 296
++ +WK
Sbjct: 327 TIKIWK 332
Score = 142 (55.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 71/263 (26%), Positives = 113/263 (42%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 94 ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 145
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + ++ + +W ++H S+V SI +
Sbjct: 146 AHTQDVKRVVW-HPT-KDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDF- 202
Query: 122 PKEFGLILACGSSDGTIS-FLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLK 180
E +++C S D T+ + Y ++ + C V G S + D+
Sbjct: 203 DAEGDRLVSC-SDDKTLKIWRAYHPGNDAGIATPDKQSVWKC--VCTLSGQHSRAIYDVS 259
Query: 181 GSKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN-------HSDWVRDVAWAPSW 232
KL G L++ GC D+ I+I+K+ D +E E H V V W P+
Sbjct: 260 WCKLTG----LIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPA- 314
Query: 233 GLSKCMIASCSQDRKVIIWTSND 255
++ +I SCS D + IW +D
Sbjct: 315 -VAGQLI-SCSDDGTIKIWKVDD 335
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 41/138 (29%), Positives = 65/138 (47%)
Query: 176 ELDLKGSK--LGGVA---KRLVSGGC--DNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA K V C D I++W G+ W +T L + H +R++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P G +AS S D IW+ + + ++ V +VSWS +G +L
Sbjct: 67 WSPC-GQ---YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCS 122
Query: 288 GDNSVSLWKENTDGAWQC 305
D SV +W+ D ++C
Sbjct: 123 RDKSVWIWEVAGDDEFEC 140
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 42/160 (26%), Positives = 76/160 (47%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I G A+C D ++V++L N + S K T++++ GH +
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGN-----TWSTK-TILSD--GHKRTIR 63
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
++ W+ P G LAS S+D IW +G + H++ V S++W+ + GL+
Sbjct: 64 EIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLAT 120
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
C S D ++ ++ ++ + +E + AHT V W P
Sbjct: 121 C-SRDKSV-WIWEVAGDDEFECAAVLNAHTQDVKRVVWHP 158
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 170 (64.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 72/279 (25%), Positives = 122/279 (43%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + ++ W+ P G LAS S+D IW +G + H++ V
Sbjct: 52 TILSD--GHKRTIREIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVK 107
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + AHT V W P
Sbjct: 108 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNAHTQDVKRVVWHP------ 158
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIW--KQEGDKWIEETKLENHSDWVRDVAWAPSWG 233
D+ L S DN IK++ Q W L +H+ V W+ +
Sbjct: 159 TKDI-----------LASASYDNTIKMFAESQLDSDWDCTATLSSHTSTV----WSIDFD 203
Query: 234 LSKCMIASCSQDRKVIIWTS----NDYVTWTPFIMNTFDDV----------VWNVSW-SL 278
+ SCS D+ + IW + ND TP + + V +++VSW L
Sbjct: 204 AEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKL 263
Query: 279 TGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRA 317
TG I T CGD+ + ++KE +D T T+E+ A
Sbjct: 264 TGLIAT-GCGDDGIRIFKETSDSKRDEPTFEQLTAEETA 301
Score = 148 (57.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 39/124 (31%), Positives = 58/124 (46%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G + ASC D+ + +W W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGI 171
++ I W+P G LA S D T + + + +E + + H +VSW
Sbjct: 60 RTIREIRWSP--CGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSG 115
Query: 172 GSLS 175
G L+
Sbjct: 116 GLLA 119
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 76/306 (24%), Positives = 122/306 (39%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
S ++ GH+ I + G YLA+ S D T +++ K + A L
Sbjct: 49 STKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWS------KSSGEFECN---ATL 99
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWA 121
+GH V V+W+ G LLA+CS D+ V IW + F+ N H V + W
Sbjct: 100 EGHENEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWH 157
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSW-GPGIGSLSELDL 179
P + ILA S D TI + W+ + +++HT ++ + G +S D
Sbjct: 158 PTKD--ILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDD 215
Query: 180 KGSKLGGVAKRLVSGGCD-NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
K K+ R G D + KQ K + T HS + DV+W GL
Sbjct: 216 KTLKIW----RAYHPGNDAGIATPDKQSVWKCVC-TLSGQHSRAIYDVSWCKLTGL--IA 268
Query: 239 IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWN-----VSWS--LTGDILTVSCGDN- 290
++ TS+ F T ++ V W+ + G + +SC D+
Sbjct: 269 TGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQL--ISCSDDG 326
Query: 291 SVSLWK 296
++ +WK
Sbjct: 327 TIKIWK 332
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 41/138 (29%), Positives = 65/138 (47%)
Query: 176 ELDLKGSK--LGGVA---KRLVSGGC--DNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA K V C D I++W G+ W +T L + H +R++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P G +AS S D IW+ + + ++ V +VSWS +G +L
Sbjct: 67 WSPC-GQ---YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCS 122
Query: 288 GDNSVSLWKENTDGAWQC 305
D SV +W+ D ++C
Sbjct: 123 RDKSVWIWEVAGDDEFEC 140
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 42/160 (26%), Positives = 76/160 (47%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I G A+C D ++V++L N + S K T++++ GH +
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGN-----TWSTK-TILSD--GHKRTIR 63
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
++ W+ P G LAS S+D IW +G + H++ V S++W+ + GL+
Sbjct: 64 EIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLAT 120
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
C S D ++ ++ ++ + +E + AHT V W P
Sbjct: 121 C-SRDKSV-WIWEVAGDDEFECAAVLNAHTQDVKRVVWHP 158
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 71/263 (26%), Positives = 112/263 (42%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 94 ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 145
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + ++ + +W ++H S+V SI +
Sbjct: 146 AHTQDVKRVVW-HPT-KDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDF- 202
Query: 122 PKEFGLILACGSSDGTIS-FLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLK 180
E +++C S D T+ + Y ++ + C V G S + D+
Sbjct: 203 DAEGDRLVSC-SDDKTLKIWRAYHPGNDAGIATPDKQSVWKC--VCTLSGQHSRAIYDVS 259
Query: 181 GSKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN-------HSDWVRDVAWAPSW 232
KL G L++ GC D+ I+I+K+ D +E E H V V W P+
Sbjct: 260 WCKLTG----LIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPA- 314
Query: 233 GLSKCMIASCSQDRKVIIWTSND 255
++ +I SCS D + IW D
Sbjct: 315 -VAGQLI-SCSDDGTIKIWKVAD 335
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 169 (64.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 59/207 (28%), Positives = 92/207 (44%)
Query: 111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC---NAVSW 167
H V ++AW P G+I +C S+D T+ S T SW + H +G N W
Sbjct: 19 HTDRVWNVAWNPAADGVIASC-SADKTVRIWEQSSLTRSWTCK--LGHRLGSFDGNTCVW 75
Query: 168 ---GPGIGSLS-----ELDLKGSKLGGVAKRLVSGGCDNLIKIWK---QEGDKWIEETKL 216
S+S E ++K L + G D + IW+ +E D++ L
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND----Y--VTWTPFIMNTFDDV 270
HS+ V+ V W P+ + + SCS D + IW S D Y V + N
Sbjct: 136 TGHSEDVKMVLWHPTMDV----LFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSST 191
Query: 271 VWNVSWSLTGDILTVSCGDN-SVSLWK 296
VW++S++ GD + V+C D+ +V +WK
Sbjct: 192 VWSISFNAAGDKM-VTCSDDLAVKIWK 217
Score = 148 (57.2 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 71/254 (27%), Positives = 104/254 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE + + G LATC D +V ++ + ++DD IA L GHS V
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQP--EEDDEFDT----IAVLTGHSEDVK 143
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIW--RGDNGNWF---KYYEYNN-HDSSVNSIAWAPKE 124
V W HP L SCSYD + IW ++G++ E NN H S+V SI++
Sbjct: 144 MVLW-HPTMDVLF-SCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAG 201
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
++ C + T +S S E H C G + + S+
Sbjct: 202 DKMV-TCSDDLAVKIWKTDISRMQSGEGYVPWTHV--CTL----SGFHDRTIYSVHWSRD 254
Query: 185 GGVAKRLVSGGCDNLIKIWKQ------EGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKC 237
G +A SG D+ I+++ +G + K E H V V WAP
Sbjct: 255 GVIA----SGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWAPD--KESR 308
Query: 238 MIASCSQDRKVIIW 251
++AS S D+ V IW
Sbjct: 309 LLASASDDKMVKIW 322
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 65/216 (30%), Positives = 99/216 (45%)
Query: 10 TGH-EDM---IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-G 64
TGH ED+ + MD L +CS D+T+K++ + +D ++ TL +EL G
Sbjct: 136 TGHSEDVKMVLWHPTMDVL----FSCSYDNTIKIWCSE---DEDGDYNCVQTL-SELNNG 187
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD-----NGN----WFKYYEYNN-HDSS 114
HS VW +++ G + +CS D V IW+ D +G W + HD +
Sbjct: 188 HSSTVWSISFNAA--GDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRT 245
Query: 115 VNSIAWAPKEFGLILACGSSDGTIS-FLTYMSDTNSWESRKIA-----AHTIGCNAVSWG 168
+ S+ W+ G+I A G+ D TI F+ SD+ S K+ AH + N+V W
Sbjct: 246 IYSVHWSRD--GVI-ASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWA 302
Query: 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWK 204
P K S+L L S D ++KIWK
Sbjct: 303 PD---------KESRL------LASASDDKMVKIWK 323
Score = 115 (45.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 33/123 (26%), Positives = 54/123 (43%)
Query: 194 GGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT- 252
G D +W+ + L H V+ V SW S ++A+C +D+ V IW
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSV----SWNASGSLLATCGRDKSVWIWEI 121
Query: 253 --SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLW-KENTDGAWQCITE 308
D T ++ + V V W T D+L SC DN++ +W E+ DG + C+
Sbjct: 122 QPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVL-FSCSYDNTIKIWCSEDEDGDYNCVQT 180
Query: 309 MGK 311
+ +
Sbjct: 181 LSE 183
Score = 97 (39.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 50/247 (20%), Positives = 97/247 (39%)
Query: 87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSD 146
S+D +W + H+S V S++W L+ CG + +
Sbjct: 67 SFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASG-SLLATCGRDKSVWIWEIQPEE 125
Query: 147 TNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ 205
+ +++ + H+ V W P + L + + C +
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNT---------IKIWCSE-----DE 171
Query: 206 EGDKWIEET--KLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN-------- 254
+GD +T +L N HS V W+ S+ + + +CS D V IW ++
Sbjct: 172 DGDYNCVQTLSELNNGHSSTV----WSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGE 227
Query: 255 DYVTWTPFI-MNTFDD-VVWNVSWSLTGDILTVSCGDNSVSLW----KENTDG-AWQCIT 307
YV WT ++ F D +++V WS G ++ GD+++ L+ ++ DG +++ +
Sbjct: 228 GYVPWTHVCTLSGFHDRTIYSVHWSRDG-VIASGAGDDTIQLFVDSDSDSVDGPSYKLLV 286
Query: 308 EMGKTSE 314
+ K E
Sbjct: 287 KKEKAHE 293
Score = 92 (37.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW 95
+ +L+GH+ VW VAW +P ++ASCS D+ V IW
Sbjct: 13 VQKLEGHTDRVWNVAW-NPAADGVIASCSADKTVRIW 48
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 148 (57.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G YLATCS D +V ++ +DD +A L+ H+ V
Sbjct: 376 GHENEVKCIAWSCNGNYLATCSRDKSVWIWEAT----EDDEFD----CLAVLQEHTQDVK 427
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LL S SYD + WR D +W + H ++V ++A++P G LA
Sbjct: 428 VVTW-HPT-EDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPN--GNTLA 483
Query: 131 CGSSDGTISFLTYMSDTN 148
+DG + FL +N
Sbjct: 484 SADNDGNV-FLWIKISSN 500
Score = 126 (49.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW--TSN 254
D+++ I ++ D W LE H + V+ +AW+ + +A+CS+D+ V IW T +
Sbjct: 355 DSVVSINEKIDDDWECTAALEGHENEVKCIAWSCNGNY----LATCSRDKSVWIWEATED 410
Query: 255 DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM-GKTS 313
D + DV V+W T D+L DNS+ W+++ D W ++ G T+
Sbjct: 411 DEFDCLAVLQEHTQDVKV-VTWHPTEDLLVSGSYDNSICFWRDDGDD-WALTCQLQGHTN 468
Score = 120 (47.3 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 33/110 (30%), Positives = 50/110 (45%)
Query: 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118
I + GH+G +W VA AHP L A+ S D+ V I+ + N + H S+ +
Sbjct: 283 ITTISGHTGRLWSVA-AHPML-PLFATSSQDKSVRIYNSNTYNLVHVID-GFHTRSIRRV 339
Query: 119 AWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSW 167
AW P E +LA S D +S + D WE + + H ++W
Sbjct: 340 AWRPIERP-VLAVASFDSVVSINEKIDD--DWECTAALEGHENEVKCIAW 386
Score = 101 (40.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
LVSG DN I W+ +GD W +L+ H++ V +A++P+ +AS D V +
Sbjct: 438 LVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNT----LASADNDGNVFL 493
Query: 251 W---TSNDYV 257
W +SN+ V
Sbjct: 494 WIKISSNEDV 503
Score = 88 (36.0 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 41/163 (25%), Positives = 71/163 (43%)
Query: 10 TGHEDMIHD-AEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSG 67
+GH + A L L+ AT S D +V+++N S L+ + G H+
Sbjct: 287 SGHTGRLWSVAAHPMLPLF-ATSSQDKSVRIYN-----------SNTYNLVHVIDGFHTR 334
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
+ +VAW P +LA S+D V I + +W H++ V IAW+ G
Sbjct: 335 SIRRVAW-RPIERPVLAVASFDSVVSINEKIDDDWECTAALEGHENEVKCIAWSCN--GN 391
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVSWGP 169
LA S D ++ ++ ++ + ++ + HT V+W P
Sbjct: 392 YLATCSRDKSV-WIWEATEDDEFDCLAVLQEHTQDVKVVTWHP 433
Score = 87 (35.7 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 197 DNLIKIWKQ-EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255
D + IW+ E D++ L+ H+ V+ V W P+ L + S S D + W +D
Sbjct: 399 DKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDL----LVSGSYDNSICFWR-DD 453
Query: 256 YVTWTPFI-MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
W + + VW +++S G+ L + D +V LW
Sbjct: 454 GDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLW 494
Score = 41 (19.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 190 RLVSGGCDNLIKIW 203
RL+SGG D ++W
Sbjct: 592 RLLSGGDDGECRVW 605
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 169 (64.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 74/286 (25%), Positives = 125/286 (43%)
Query: 50 DSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYN 109
+S S K T++++ GH + ++ W+ P G LAS S+D IW +G +
Sbjct: 46 NSWSTK-TILSD--GHKRTIREIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLE 100
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWG 168
H++ V S++W+ K GL+ C S D ++ ++ ++ + +E + HT V W
Sbjct: 101 GHENEVKSVSWS-KSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWH 157
Query: 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDV 226
P E+ L S DN IK++ + W L +H+ V
Sbjct: 158 P----TKEI-------------LASASYDNTIKMFAESALDSDWDCTATLSSHTSTV--- 197
Query: 227 AWAPSWGLSKCMIASCSQDRKVIIWTS----NDYVTWTPFIMNTFDDV----------VW 272
W+ + + SCS D + IW + ND TP + V ++
Sbjct: 198 -WSIDFDADGERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIY 256
Query: 273 NVSW-SLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRA 317
+VSW LTG I T +CGD+ + ++KE++D T T+E+ A
Sbjct: 257 DVSWCKLTGLIAT-ACGDDGIRIFKESSDSKRDEPTFEQVTAEESA 301
Score = 149 (57.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G ASC D+ + IW +W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGI 171
++ I W+P G LA S D T + + + +E + + H +VSW
Sbjct: 60 RTIREIRWSP--CGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSKSG 115
Query: 172 GSLS 175
G L+
Sbjct: 116 GLLA 119
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/160 (29%), Positives = 72/160 (45%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
S ++ GH+ I + G YLA+ S D T +++ K + A L
Sbjct: 49 STKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWS------KSSGEFECN---ATL 99
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWA 121
+GH V V+W+ + G LLA+CS D+ V IW + F+ N H V + W
Sbjct: 100 EGHENEVKSVSWS--KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWH 157
Query: 122 P-KEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHT 159
P KE ILA S D TI + + W+ + +++HT
Sbjct: 158 PTKE---ILASASYDNTIKMFAESALDSDWDCTATLSSHT 194
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 41/138 (29%), Positives = 64/138 (46%)
Query: 176 ELDLKGSK--LGGVA-----KRLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA S G D I+IW G+ W +T L + H +R++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P G +AS S D IW+ + + ++ V +VSWS +G +L
Sbjct: 67 WSPC-GQ---YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATCS 122
Query: 288 GDNSVSLWKENTDGAWQC 305
D SV +W+ D ++C
Sbjct: 123 RDKSVWIWEVAGDDEFEC 140
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 42/160 (26%), Positives = 75/160 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I G A+C D +++++L N S S K T++++ GH +
Sbjct: 12 GHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGN-----SWSTK-TILSD--GHKRTIR 63
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
++ W+ P G LAS S+D IW +G + H++ V S++W+ K GL+
Sbjct: 64 EIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-KSGGLLAT 120
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
C S D ++ ++ ++ + +E + HT V W P
Sbjct: 121 C-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWHP 158
Score = 132 (51.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 69/262 (26%), Positives = 104/262 (39%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 94 ECNATLEGHENEVKSVSWSKSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 145
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + ++ + +W ++H S+V SI +
Sbjct: 146 PHTQDVKRVVW-HPT-KEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFD 203
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
L+ +C S D T+ N T+ V G S + D+
Sbjct: 204 ADGERLV-SC-SDDTTLKIWRAYHPGNDAGVATPDKQTVW-KCVCTLSGQHSRAIYDVSW 260
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN-------HSDWVRDVAWAPSWG 233
KL G L++ C D+ I+I+K+ D +E E H V V W P
Sbjct: 261 CKLTG----LIATACGDDGIRIFKESSDSKRDEPTFEQVTAEESAHEQDVNSVEWNP--- 313
Query: 234 LSKCMIASCSQDRKVIIWTSND 255
+ + SCS D + IW D
Sbjct: 314 VMAGQLISCSDDGTIKIWKMLD 335
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 168 (64.2 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 65/245 (26%), Positives = 105/245 (42%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G YLATCS D +V ++ D + ++ I+ L+ HS V
Sbjct: 105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES-------GEEYECISVLQEHSQDVK 157
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V W HP LLAS SYD V IW+ + +W N H+ +V S + E G+
Sbjct: 158 HVIW-HPS-EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE-GVFRL 214
Query: 131 C-GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
C GS D T+ YM D + + C A+ P + ++ G +A
Sbjct: 215 CSGSDDSTVRVWKYMGDDEDDQQEWV------CEAIL--PDVHKRQVYNVAWGFNGLIA- 265
Query: 190 RLVSGGCDNLIKIWKQEGDKW-IEETKLENHSDW-VRDVAWAPSWGLSKCMIASCSQDRK 247
S G D ++ ++++ +W + + H + + V W G K ++A+ D
Sbjct: 266 ---SVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNG--KTILATGGDDGI 320
Query: 248 VIIWT 252
V W+
Sbjct: 321 VNFWS 325
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 68/280 (24%), Positives = 107/280 (38%)
Query: 43 DRNLKKDDSHSQKGTLIAELK--GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG 100
DR +K TLI L H + VAW P +LLA+ S+D V IW +
Sbjct: 33 DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW-RPHT-SLLAAGSFDSTVSIWAKEES 90
Query: 101 NWFKYYEYN------NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK 154
+ +E + H++ V +AW+ G LA S D ++ +E
Sbjct: 91 A-DRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECIS 147
Query: 155 IAA-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE 213
+ H+ V W P SE L S D+ ++IWK D W
Sbjct: 148 VLQEHSQDVKHVIWHP-----SEA------------LLASSSYDDTVRIWKDYDDDWECV 190
Query: 214 TKLENHSDWVRDVAWAPSWGLSKCMIASCS--QDRKVIIWT-----SNDYVTWT--PFIM 264
L H V W+ + ++ + CS D V +W +D W +
Sbjct: 191 AVLNGHEGTV----WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILP 246
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304
+ V+NV+W G I +V D +++++E DG W+
Sbjct: 247 DVHKRQVYNVAWGFNGLIASVGA-DGVLAVYEE-VDGEWK 284
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 44/148 (29%), Positives = 67/148 (45%)
Query: 7 LVDTGHEDMIHD-AEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH 65
L +T H+ I A + L LA S D TV ++ + + + + + L+A ++GH
Sbjct: 52 LDETAHKKAIRSVAWRPHTSL-LAAGSFDSTVSIWAKEESADR----TFEMDLLAIIEGH 106
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD-NGNWFKYYEY-NNHDSSVNSIAWAPK 123
V VAW++ G LA+CS D+ V IW D +G ++ H V + W P
Sbjct: 107 ENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS 164
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWE 151
E +LA S D T+ D WE
Sbjct: 165 E--ALLASSSYDDTVRIWKDYDD--DWE 188
Score = 121 (47.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 47/187 (25%), Positives = 79/187 (42%)
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGV 187
+LA GS D T+S W + A T + ++ G E ++KG
Sbjct: 72 LLAAGSFDSTVSI---------WAKEESADRTFEMDLLAIIEG----HENEVKGVAWSND 118
Query: 188 AKRLVSGGCDNLIKIWK--QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
L + D + IW+ + G+++ + L+ HS V+ V W PS + ++AS S D
Sbjct: 119 GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS----EALLASSSYD 174
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG--DNSVSLWK-----EN 298
V IW D ++N + VW+ + T + + G D++V +WK E+
Sbjct: 175 DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234
Query: 299 TDGAWQC 305
W C
Sbjct: 235 DQQEWVC 241
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 177 (67.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 84/282 (29%), Positives = 118/282 (41%)
Query: 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV 115
G L+ L GHSG V +A++ P G LLAS SYD + +W G + +E H S+
Sbjct: 782 GELLQTLDGHSGTVESLAFS-PD-GKLLASGSYDNTIDLWDSATGELLQTFE--GHPHSI 837
Query: 116 NSIAWAPKEFGLILACGSSDGTISF-------LTYMSDTNSWESRKIAAHTIGCNAVS-- 166
S+A+AP G LA S D TI L D++S R +A G S
Sbjct: 838 WSVAFAPD--GKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSS 895
Query: 167 -------WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-WIEET---- 214
W P G L + L+G + G V S L ++ K W T
Sbjct: 896 LDSTIKVWNPATGELQQ-SLEG-RSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELL 953
Query: 215 -KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDV-VW 272
LE HS VR VA++P K +AS S D + +W S T + TF +W
Sbjct: 954 QTLEGHSQSVRSVAFSPD---GK-QLASSSSDTTIKLWNST-----TGELQQTFKGHDLW 1004
Query: 273 --NVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKT 312
V++S G L DN++ LW T Q + + ++
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRS 1046
Score = 173 (66.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 82/320 (25%), Positives = 135/320 (42%)
Query: 5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG 64
L +D GH + G LA+ S D+T+ +++ S G L+ +G
Sbjct: 785 LQTLD-GHSGTVESLAFSPDGKLLASGSYDNTIDLWD-----------SATGELLQTFEG 832
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
H +W VA+A P G LAS S D + IW G + + +H SV S+A++P
Sbjct: 833 HPHSIWSVAFA-PD-GKELASASDDSTIKIWDLATGELQQTLD--SHSQSVRSVAFSPD- 887
Query: 125 FGLILACGSSDGTISFLT--------YMSDTNSW--------ESRKIAAHTIGCNAVSWG 168
G +LA S D TI + + W + +K+A+ + W
Sbjct: 888 -GKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN 946
Query: 169 PGIGSLSE-LDLKGSKLGGVA-----KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDW 222
P G L + L+ + VA K+L S D IK+W + +++T + H W
Sbjct: 947 PATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGE-LQQT-FKGHDLW 1004
Query: 223 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD---VVWNVSWSLT 279
+R VA++P K +++ S D + +W D T + + +D V V++S
Sbjct: 1005 IRAVAFSPD---GKHLVSG-SDDNTIKLW---DLATSE--LQQSLEDHSRSVHAVAFSPD 1055
Query: 280 GDILTVSCGDNSVSLWKENT 299
L S D+++ LW T
Sbjct: 1056 DKQLASSSLDSTIKLWDSAT 1075
Score = 147 (56.8 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 81/319 (25%), Positives = 128/319 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + G LA+ SSD T+K++N S G L KGH +W
Sbjct: 958 GHSQSVRSVAFSPDGKQLASSSSDTTIKLWN-----------STTGELQQTFKGHD--LW 1004
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL- 129
A A G L S S D + +W D +H SV+++A++P + L
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLW--DLATSELQQSLEDHSRSVHAVAFSPDDKQLASS 1062
Query: 130 -----------ACGSSDGTISFLTY--MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSE 176
A G T+ + S T S + + +A+++ W P G L +
Sbjct: 1063 SLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQ 1122
Query: 177 -LDLKGSKLGGVA-----KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP 230
L + + VA K+L SG D+ IK+W + ++ LE HSD ++ V ++P
Sbjct: 1123 TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQT--LEGHSDRIQSVVFSP 1180
Query: 231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGD 289
L +AS S D+ +W D T I V +V++S G +L S
Sbjct: 1181 DGKL----LASGSYDQTAKLW---DPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYG 1233
Query: 290 NSVSLWKENTDGAWQCITE 308
++ LW T Q + +
Sbjct: 1234 ETIKLWDPVTGELLQTLND 1252
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 71/262 (27%), Positives = 107/262 (40%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+ H GPV V ++ P G L S SYD V IW G + + H +V S+A++
Sbjct: 746 LENHLGPVESVVFS-PD-GKQLVSGSYDDTVKIWDPATGELLQTLD--GHSGTVESLAFS 801
Query: 122 PKEFGLILACGSSDGTISFL---------TYMSDTNS-W------ESRKIAAHTIGCNAV 165
P G +LA GS D TI T+ +S W + +++A+ +
Sbjct: 802 PD--GKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIK 859
Query: 166 SWGPGIGSLSE-LDLKGSKLGGVAKRLVSG---GCDNLIKIWKQEGDKWIE-ETKLENHS 220
W G L + LD + VA G +L K E + LE S
Sbjct: 860 IWDLATGELQQTLDSHSQSVRSVAFS-PDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD---DVVWNVSWS 277
WV+ VA++P G +AS S+ V +W T ++ T + V +V++S
Sbjct: 919 GWVKSVAFSPD-GKK---LASGSEKNTVKLWNPA-----TGELLQTLEGHSQSVRSVAFS 969
Query: 278 LTGDILTVSCGDNSVSLWKENT 299
G L S D ++ LW T
Sbjct: 970 PDGKQLASSSSDTTIKLWNSTT 991
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 166 (63.5 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 64/262 (24%), Positives = 113/262 (43%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + ++ W+ P G LAS S+D IW +G + H++ V
Sbjct: 52 TILSD--GHKRTIREIQWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVK 107
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + +HT V W P
Sbjct: 108 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNSHTQDVKRVVWHP----TK 160
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE--GDKWIEETKLENHSDWVRDVAWAPSWG 233
E+ L S DN IK++ +E + W L +H+ + W +
Sbjct: 161 EI-------------LASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTI----WGIDFD 203
Query: 234 LSKCMIASCSQDRKVIIW------------TSNDYVTWTPF--IMNTFDDVVWNVSW-SL 278
+ SCS D V IW T + W + +++VSW L
Sbjct: 204 ADGERLVSCSDDTTVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKL 263
Query: 279 TGDILTVSCGDNSVSLWKENTD 300
TG I T +CGD+ + ++KE +D
Sbjct: 264 TGLIAT-ACGDDGIRIFKETSD 284
Score = 153 (58.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 50/169 (29%), Positives = 74/169 (43%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
S ++ GH+ I + + G YLA+ S D T +++ K + A L
Sbjct: 49 STKTILSDGHKRTIREIQWSPCGQYLASASFDATTAIWS------KSSGEFECN---ATL 99
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWA 121
+GH V V+W+ G LLA+CS D+ V IW + F+ N+H V + W
Sbjct: 100 EGHENEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWH 157
Query: 122 P-KEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWG 168
P KE ILA S D TI N W+ + + +HT + WG
Sbjct: 158 PTKE---ILASASYDNTIKMYAEEPIDNDWDCTATLTSHT----STIWG 199
Score = 148 (57.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G + ASC D+ + IW W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGI 171
++ I W+P G LA S D T + + + +E + + H +VSW
Sbjct: 60 RTIREIQWSP--CGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSG 115
Query: 172 GSLS 175
G L+
Sbjct: 116 GLLA 119
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 176 ELDLKGSK--LGGVA---KRLVSGGC--DNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA K V C D I+IW G+ W +T L + H +R++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQ 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P G +AS S D IW+ + + ++ V +VSWS +G +L
Sbjct: 67 WSPC-GQ---YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCS 122
Query: 288 GDNSVSLWKENTDGAWQC 305
D SV +W+ D ++C
Sbjct: 123 RDKSVWIWEVAGDDEFEC 140
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 40/160 (25%), Positives = 76/160 (47%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I G A+C D +++++L N + S K T++++ GH +
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGN-----TWSTK-TILSD--GHKRTIR 63
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
++ W+ P G LAS S+D IW +G + H++ V S++W+ + GL+
Sbjct: 64 EIQWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLAT 120
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
C S D ++ ++ ++ + +E + +HT V W P
Sbjct: 121 C-SRDKSV-WIWEVAGDDEFECAAVLNSHTQDVKRVVWHP 158
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 67/258 (25%), Positives = 103/258 (39%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 94 ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 145
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + ++ + + +W +H S++ I +
Sbjct: 146 SHTQDVKRVVW-HPT-KEILASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFD 203
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
L+ +C S D T+ NS T+ V G S + D+
Sbjct: 204 ADGERLV-SC-SDDTTVKIWRAYHPGNSAGVATPDQQTVW-KCVCTLSGQHSRAIYDVSW 260
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN-------HSDWVRDVAWAPSWG 233
KL G L++ C D+ I+I+K+ D +E E H V V W P
Sbjct: 261 CKLTG----LIATACGDDGIRIFKETSDSKPDEPTFEQLTAEESAHDQDVNSVQWNP--- 313
Query: 234 LSKCMIASCSQDRKVIIW 251
+ + SCS D + IW
Sbjct: 314 VVAGQLISCSDDGTIKIW 331
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 166 (63.5 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 62/261 (23%), Positives = 113/261 (43%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + ++ W+ P G LAS S+D IW +G + H++ V
Sbjct: 52 TILSD--GHKRTIREIRWS-P-CGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVK 107
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + HT V W P
Sbjct: 108 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWHP----TK 160
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWG 233
EL L S DN IK++ ++ W L +H+ V W+ +
Sbjct: 161 EL-------------LASASYDNTIKMFAEDALDSDWDCVATLSSHTSTV----WSIDFD 203
Query: 234 LSKCMIASCSQDRKVIIWTS----NDYVTWTP----------FIMNTFDDVVWNVSWSLT 279
+ + SCS D + IW + ND TP I +++VSW
Sbjct: 204 ATGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKL 263
Query: 280 GDILTVSCGDNSVSLWKENTD 300
+++ +CGD+ + ++KE +D
Sbjct: 264 TNLIATACGDDGIRIFKETSD 284
Score = 150 (57.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 37/116 (31%), Positives = 56/116 (48%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHDSSVNSIAW 120
L+GH G +W VAW HP+ G + ASC D+ + IW + W K + H ++ I W
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIRW 67
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGIGSLS 175
+P G LA S DGT + + + +E + + H +VSW G L+
Sbjct: 68 SP--CGQYLASASFDGTTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLA 119
Score = 142 (55.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 44/144 (30%), Positives = 69/144 (47%)
Query: 171 IGSLS-ELDLKGSK--LGGVA---KRLVSGGC--DNLIKIWKQEGDKWIEETKL-ENHSD 221
+G L+ E L+G K + GVA K V C D I+IW G+ W +T L + H
Sbjct: 1 MGRLNLEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKR 60
Query: 222 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD 281
+R++ W+P G +AS S D IW+ + + ++ V +VSWS +G
Sbjct: 61 TIREIRWSPC-GQ---YLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG 116
Query: 282 ILTVSCGDNSVSLWKENTDGAWQC 305
+L D SV +W+ D ++C
Sbjct: 117 LLATCSRDKSVWIWEVAGDDEFEC 140
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 45/156 (28%), Positives = 69/156 (44%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH+ I + G YLA+ S D T +++ K + A L+GH
Sbjct: 53 ILSDGHKRTIREIRWSPCGQYLASASFDGTTAIWS------KSSGEFECN---ATLEGHE 103
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAP-KE 124
V V+W+ G LLA+CS D+ V IW + F+ N H V + W P KE
Sbjct: 104 NEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKE 161
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHT 159
+LA S D TI + + W+ +++HT
Sbjct: 162 ---LLASASYDNTIKMFAEDALDSDWDCVATLSSHT 194
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/171 (25%), Positives = 82/171 (47%)
Query: 2 VSQLNLVDT--GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI 59
+ +LNL T GH+ I G A+C D +++++L+ N + + K T++
Sbjct: 1 MGRLNLEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGN-----TWTTK-TIL 54
Query: 60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIA 119
++ GH + ++ W+ P G LAS S+D IW +G + H++ V S++
Sbjct: 55 SD--GHKRTIREIRWS-P-CGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVS 110
Query: 120 WAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
W+ + GL+ C S D ++ ++ ++ + +E + HT V W P
Sbjct: 111 WS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWHP 158
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 67/258 (25%), Positives = 104/258 (40%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 94 ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 145
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP LLAS SYD + ++ D + +W ++H S+V SI +
Sbjct: 146 PHTQDVKRVVW-HPT-KELLASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDFD 203
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
L+ +C S D ++ N T+ V G S + D+
Sbjct: 204 ATGERLV-SC-SDDTSLKIWQAYHPGNDAGVATPDKQTVW-KCVCTISGQHSRAIYDVSW 260
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN-------HSDWVRDVAWAPSWG 233
KL L++ C D+ I+I+K+ D +E E H V V W P
Sbjct: 261 CKL----TNLIATACGDDGIRIFKETSDSKRDEPTFEQLTAEEGAHDQDVNSVEWNP--- 313
Query: 234 LSKCMIASCSQDRKVIIW 251
+ + + SCS D + +W
Sbjct: 314 VVEGQLISCSDDGTIKVW 331
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 120 (47.3 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 47/152 (30%), Positives = 68/152 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE ++ + G LA+ D + ++N+ + + A LKGHSG V
Sbjct: 53 SGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCEN----------YATLKGHSGAV 102
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++ + G+LL S S D+ V +W + G K H S VNS P G L
Sbjct: 103 MELHYNTD--GSLLFSASTDKTVCVWDSETGERVK--RLKGHTSFVNSCF--PARRGPQL 156
Query: 130 AC-GSSDGTISFLTYMSDTNSWESRKIAA-HT 159
AC GS DGT+ W+ RK A+ HT
Sbjct: 157 ACTGSDDGTVKL---------WDIRKKASVHT 179
Score = 90 (36.7 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 28/116 (24%), Positives = 46/116 (39%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+++SGG DN IK+W +K I ++ H D V + S + S S D V
Sbjct: 197 QIISGGIDNDIKVWDLRQNKLIYS--MQGHGDSVTGL----SLSADGSYLLSNSMDNSVR 250
Query: 250 IWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
+W + + ++ F+ + SWS G + D V +W T
Sbjct: 251 VWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTT 306
Score = 51 (23.0 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE-TKL--ENHSDWVRDVAWAPSWGLSKC 237
G L L+S DN +++W E K+ N ++ +++ SW
Sbjct: 230 GLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSADGS 288
Query: 238 MIASCSQDRKVIIW 251
IA+ S DR V IW
Sbjct: 289 KIAAGSADRFVYIW 302
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 133 (51.9 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 56/177 (31%), Positives = 77/177 (43%)
Query: 2 VSQLNLVDTGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
VS+L GH + I A+ LAT S D+T ++++ + K H+
Sbjct: 141 VSRLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPK---HT------- 190
Query: 61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
LKGH+G V V+W+ P GT LA+CS D+ V IW + G E H V IAW
Sbjct: 191 -LKGHAGWVLGVSWS-PD-GTRLATCSMDKTVRIWDPETGKQVGS-ELKGHAKWVQGIAW 246
Query: 121 APKEF---GLI-LACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS 173
P G L S D T T +T E ++ H + V WG G G+
Sbjct: 247 EPLHLWRDGTPRLVSASKDFTARIWTV--NTGRTE-HVLSGHKGSVSCVRWGAGNGT 300
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 75/314 (23%), Positives = 119/314 (37%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + G LATCS D TV++++ ++ Q G+ ELKGH+ V
Sbjct: 193 GHAGWVLGVSWSPDGTRLATCSMDKTVRIWD-------PETGKQVGS---ELKGHAKWVQ 242
Query: 71 QVAWA--HP-QFGT-LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
+AW H + GT L S S D IW + G + + H SV+ + W
Sbjct: 243 GIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGR--TEHVLSGHKGSVSCVRWGAGNGT 300
Query: 127 LILACGSSDGTISFL-----TYMSDTNS---WESRKIAAHTIGCNAVSWG-----PGIGS 173
++ S D T+ T + D S W + + C + P
Sbjct: 301 GVVYTASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALSTDFVCRTGFFDHTKTVPATAE 360
Query: 174 -----LSELDLKGSKLGG-VAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVA 227
E K +++GG + +RLVS D + ++ D ++ H V V
Sbjct: 361 EKTAKAKERYEKAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVT 420
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTV 285
++P MIAS D +W + D FI V V+ S+S +L
Sbjct: 421 FSPDGS----MIASAGWDNATKLWNARD----GKFINTLRGHVAPVYQCSFSADSRLLVT 472
Query: 286 SCGDNSVSLWKENT 299
+ D ++ +W T
Sbjct: 473 ASKDTTLKVWNVRT 486
Score = 81 (33.6 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S G DN K+W K+I L H V V + S+ ++ + S+D + +
Sbjct: 428 IASAGWDNATKLWNARDGKFINT--LRGH---VAPV-YQCSFSADSRLLVTASKDTTLKV 481
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
W T + +D V+ V WS G + D +V LW+
Sbjct: 482 WNVRTGKLATD--LPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLWR 525
Score = 40 (19.1 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWKENTDG 301
+V++S G ++ + DN+ LW DG
Sbjct: 418 HVTFSPDGSMIASAGWDNATKLWNAR-DG 445
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 165 (63.1 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 74/261 (28%), Positives = 107/261 (40%)
Query: 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE----YNNHDSS 114
+A L+GH V V W+ G LASCS D+ IW + + YE +H
Sbjct: 82 MATLEGHENEVKCVNWSSS--GVYLASCSRDKSAWIWEFIEED--EEYECASVLTDHSQD 137
Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT-IGCNAVSWGPGIGS 173
V + W+PKE L+ A S D TI + D WE +HT IG + W S
Sbjct: 138 VKHVVWSPKENALVSA--SYDNTIKIYKEVDD--DWE----CSHTLIGHESTVWSLSFHS 189
Query: 174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWK--QEGD---KWIEETKLEN-HSDWVRDVA 227
EL VS G D ++KIWK + G KWI + H+ + DV
Sbjct: 190 SGEL-------------FVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVD 236
Query: 228 WAPSWGLSKCMIASCSQDR-------KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG 280
W+ L+ + +C D ++ I SN + + + D V V W
Sbjct: 237 WSK---LNNKIATACGDDAIRIFSIVRITISISNQLLFIAYYQAHNHDVNV--VRWHPKV 291
Query: 281 D-ILTVSCGDNSVSLWKENTD 300
D IL DN + +WK +++
Sbjct: 292 DNILASGSDDNCIKIWKVHSN 312
Score = 153 (58.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/198 (29%), Positives = 82/198 (41%)
Query: 6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH 65
+++ GH I G YLA+CS D T+ +++ KKD +A L+GH
Sbjct: 38 SILTEGHTRTIRSVAWSPCGNYLASCSFDATICIWS-----KKDGDFE----CMATLEGH 88
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE----YNNHDSSVNSIAWA 121
V V W+ G LASCS D+ IW + + YE +H V + W+
Sbjct: 89 ENEVKCVNWSSS--GVYLASCSRDKSAWIWEFIEED--EEYECASVLTDHSQDVKHVVWS 144
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLK- 180
PKE L+ A S D TI + D WE IG + W S EL +
Sbjct: 145 PKENALVSA--SYDNTIKIYKEVDD--DWECSHTL---IGHESTVWSLSFHSSGELFVSC 197
Query: 181 -GSKLGGVAKRLVSGGCD 197
K+ + K L SG D
Sbjct: 198 GDDKVLKIWKCLKSGPSD 215
Score = 124 (48.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 35/135 (25%), Positives = 63/135 (46%)
Query: 39 VFNLDRNLK--KDDSHSQKGTLIAEL-KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW 95
+FN + ++ +S S + T + L +GH+ + VAW+ P G LASCS+D + IW
Sbjct: 15 IFNFGQYIRIWAKNSDSDQWTCKSILTEGHTRTIRSVAWS-P-CGNYLASCSFDATICIW 72
Query: 96 RGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI 155
+G++ H++ V + W+ G+ LA S D + ++ + +E +
Sbjct: 73 SKKDGDFECMATLEGHENEVKCVNWSSS--GVYLASCSRDKSAWIWEFIEEDEEYECASV 130
Query: 156 AA-HTIGCNAVSWGP 169
H+ V W P
Sbjct: 131 LTDHSQDVKHVVWSP 145
Score = 121 (47.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 38/118 (32%), Positives = 57/118 (48%)
Query: 191 LVSGGCDNLIKIW-KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L S D I IW K++GD T LE H + V+ V W+ S G+ +ASCS+D+
Sbjct: 60 LASCSFDATICIWSKKDGDFECMAT-LEGHENEVKCVNWSSS-GV---YLASCSRDKSAW 114
Query: 250 IWT--SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
IW D ++ V +V WS + L + DN++ ++KE D W+C
Sbjct: 115 IWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENALVSASYDNTIKIYKE-VDDDWEC 171
Score = 120 (47.3 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 200 IKIWKQ--EGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY 256
I+IW + + D+W ++ L E H+ +R VAW+P +ASCS D + IW+ D
Sbjct: 22 IRIWAKNSDSDQWTCKSILTEGHTRTIRSVAWSPCGNY----LASCSFDATICIWSKKDG 77
Query: 257 VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKE-NTDGAWQCITEMGKTSE 314
+ ++ V V+WS +G + SC D S +W+ D ++C + + S+
Sbjct: 78 DFECMATLEGHENEVKCVNWSSSG-VYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQ 136
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 115 (45.5 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
LVS DN + +W+ +K +E ++ H + V DV ++P L IAS S D+ V +
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVE--RMTGHQNVVNDVKYSPDVKL----IASASFDKSVRL 401
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
W ++D F + V+ V+WS ++ D+++ +W T
Sbjct: 402 WRASDGQYMATFRGHV--QAVYTVAWSADSRLIVSGSKDSTLKVWSVQT 448
Score = 99 (39.9 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 48/166 (28%), Positives = 65/166 (39%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + + G +LA+ S D TV++++L+ + H GH V
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNT----ETPHFT-------CTGHKQWVL 165
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG---L 127
V+WA P G LAS +IIW + G K + H +N +AW P
Sbjct: 166 CVSWA-PD-GKRLASGCKAGSIIIWDPETGQQ-KGRPLSGHKKHINCLAWEPYHRDPECR 222
Query: 128 ILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGIG 172
LA S DG D + IA HT AV WG G G
Sbjct: 223 KLASASGDGDCRIW----DVKLGQCLMNIAGHTNAVTAVRWG-GAG 263
Score = 86 (35.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
++ +VSG D+ +K+W + K +E L H+D V V WAP G S+ +AS +D+
Sbjct: 429 SRLIVSGSKDSTLKVWSVQTKKLAQE--LPGHADEVFGVDWAPD-G-SR--VASGGKDKV 482
Query: 248 VIIW 251
+ +W
Sbjct: 483 IKLW 486
Score = 67 (28.6 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 23/107 (21%), Positives = 43/107 (40%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K + S D +++W+ +++ H V VAW+ S+ +I S S+D +
Sbjct: 388 KLIASASFDKSVRLWRASDGQYM--ATFRGHVQAVYTVAWSAD---SR-LIVSGSKDSTL 441
Query: 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W+ + D V+ V W+ G + D + LW
Sbjct: 442 KVWSVQTKKLAQELPGHA--DEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 65 (27.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV 115
G + + GH+ V V W G + S S DR V +WR +G + ++ H V
Sbjct: 241 GQCLMNIAGHTNAVTAVRWGGA--GLIYTS-SKDRTVKMWRAADGILCR--TFSGHAHWV 295
Query: 116 NSIA 119
N+IA
Sbjct: 296 NNIA 299
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 175 (66.7 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 83/309 (26%), Positives = 135/309 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + + + LA+ S D TVK+++ + GTL LKGH+ V
Sbjct: 303 GHNEWVKSVVFSHDSRLLASASDDGTVKIWD-----------TATGTLQRMLKGHNDSVR 351
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA--------P 122
V ++H L+AS S DR V IW G + + +H+ SV ++++A
Sbjct: 352 SVVFSHDS--RLIASGSNDRTVRIWETTTG--LLRHTFEDHEDSVMAVSFAHDSRRLASA 407
Query: 123 KEFGLILACGSSDGTISFLTYMSD--TNSW----ESRKIAAHTIGCNAVSWGPGIGSLSE 176
+ G + + G++ + D NS +SR +A+ + W GSL
Sbjct: 408 SDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQR 467
Query: 177 LDLKGSK--LGGVA----KRLVSGGCDNL-IKIWKQEGDKWIEETKLENHSDWVRDVAWA 229
L+G + V RL++ D++ +KIW + LE+H +WVR V ++
Sbjct: 468 T-LEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPL--QNNLESHDNWVRSVVFS 524
Query: 230 PSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF---DDVVWNVSWSLTGDILTVS 286
S+ ++AS S D V IW T T + NT DD V +VS+S +L +
Sbjct: 525 HD---SR-LLASASDDMTVKIWD-----TATGSLENTLEGHDDRVNSVSFSPDSRLLASA 575
Query: 287 CGDNSVSLW 295
D +V +W
Sbjct: 576 SDDGTVKIW 584
Score = 168 (64.2 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 81/310 (26%), Positives = 132/310 (42%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH D + + +A+ S+D TV+++ L + H+ + H V
Sbjct: 345 GHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLR---HT--------FEDHEDSVM 393
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V++AH LAS S V IW G+ E HD VNS++++P +LA
Sbjct: 394 AVSFAHDS--RRLASASDGGNVKIWDTRTGSLQNVLE--GHDDCVNSVSFSPDS--RLLA 447
Query: 131 CGSSDGTI--------SFLTYMSDTNSW--------ESRKIAAHTIGCNAVSWGPGIGSL 174
S D T+ S + N W +SR IA+ + W L
Sbjct: 448 SASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPL 507
Query: 175 -SELDLKGSKLGGVA----KRLVSGGCDNL-IKIWKQEGDKWIEETKLENHSDWVRDVAW 228
+ L+ + + V RL++ D++ +KIW +E T LE H D V V++
Sbjct: 508 QNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGS-LENT-LEGHDDRVNSVSF 565
Query: 229 APSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD---VVWNVSWSLTGDILTV 285
+P S+ ++AS S D V IW Y T + +TFD V ++++S T ++L
Sbjct: 566 SPD---SR-LLASASDDGTVKIW----YAA-TGTVQHTFDGSGRVAISLAFSHTSNLLAS 616
Query: 286 SCGDNSVSLW 295
+ D +V +W
Sbjct: 617 AMDDGTVKIW 626
Score = 148 (57.2 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 83/313 (26%), Positives = 137/313 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ + + LA+ S D TVK+++ + ++ L+GH+ V
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNT-----------LEGHNEWVK 309
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN---------HDSSVNSIAWA 121
V ++H LLAS S D V IW G + + +N HDS + IA
Sbjct: 310 SVVFSHDS--RLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRL--IASG 365
Query: 122 PKEFGLILACGSSDGTI--SFLTY----MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLS 175
+ + ++ G + +F + M+ + + +SR++A+ + G N W GSL
Sbjct: 366 SND-RTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQ 424
Query: 176 ELDLKGSK--LGGVA-----KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAW 228
+ L+G + V+ + L S D +KIW ++ T LE H+DWVR V +
Sbjct: 425 NV-LEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGS-LQRT-LEGHNDWVRSVVF 481
Query: 229 APSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVS 286
+ S+ +IAS S D V IW D T P N + D+ V +V +S +L +
Sbjct: 482 SHD---SR-LIASASDDMTVKIW---DTAT-VPLQNNLESHDNWVRSVVFSHDSRLLASA 533
Query: 287 CGDNSVSLWKENT 299
D +V +W T
Sbjct: 534 SDDMTVKIWDTAT 546
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 70/263 (26%), Positives = 107/263 (40%)
Query: 60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIA 119
A+ KGH V V+++H LLAS S D V IW D F H+ V S+
Sbjct: 257 AQFKGHDRAVGSVSFSHDS--RLLASASGDGTVKIW--DTATSFLQNTLEGHNEWVKSVV 312
Query: 120 WAPKEFGLILACGSSDGTISFLTYMSDT--------N--------SWESRKIAAHTIGCN 163
++ +LA S DGT+ + T N S +SR IA+ +
Sbjct: 313 FSHDS--RLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRT 370
Query: 164 AVSWGPGIGSLSEL--DLKGSKLGGV----AKRLVSGGCDNLIKIWKQEGDKWIEETKLE 217
W G L D + S + ++RL S +KIW + LE
Sbjct: 371 VRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSL--QNVLE 428
Query: 218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW-TSNDYVTWTPFIMNTFDDVVWNVSW 276
H D V V+++P S+ ++AS S DR V IW + + T + +D V +V +
Sbjct: 429 GHDDCVNSVSFSPD---SR-LLASASDDRTVKIWHAATGSLQRT---LEGHNDWVRSVVF 481
Query: 277 SLTGDILTVSCGDNSVSLWKENT 299
S ++ + D +V +W T
Sbjct: 482 SHDSRLIASASDDMTVKIWDTAT 504
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 164 (62.8 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 64/262 (24%), Positives = 113/262 (43%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + ++ W+ P G LAS S+D IW +G + H++ V
Sbjct: 52 TILSD--GHKRTIREIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVK 107
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + HT V W P
Sbjct: 108 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWHP------ 158
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE--GDKWIEETKLENHSDWVRDVAWAPSWG 233
D+ L S DN IK++ +E + W L +H+ V W +
Sbjct: 159 TKDI-----------LASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTV----WGIDFD 203
Query: 234 LSKCMIASCSQDRKVIIW------------TSNDYVTWTPF--IMNTFDDVVWNVSW-SL 278
+ SCS D + IW T + W + +++VSW L
Sbjct: 204 ADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKL 263
Query: 279 TGDILTVSCGDNSVSLWKENTD 300
TG I T +CGD+ + ++KE++D
Sbjct: 264 TGLIAT-ACGDDGIRIFKESSD 284
Score = 148 (57.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G + ASC D+ + IW W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGI 171
++ I W+P G LA S D T + + + +E + + H +VSW
Sbjct: 60 RTIREIRWSP--CGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSG 115
Query: 172 GSLS 175
G L+
Sbjct: 116 GLLA 119
Score = 147 (56.8 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 48/168 (28%), Positives = 71/168 (42%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
S ++ GH+ I + G YLA+ S D T +++ K + A L
Sbjct: 49 STKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWS------KSSGEFECN---ATL 99
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWA 121
+GH V V+W+ G LLA+CS D+ V IW + F+ N H V + W
Sbjct: 100 EGHENEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWH 157
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWG 168
P + ILA S D TI N W+ + + +HT + WG
Sbjct: 158 PTKD--ILASASYDNTIKMFAEEPIDNDWDCTATLTSHT----STVWG 199
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 176 ELDLKGSK--LGGVA---KRLVSGGC--DNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA K V C D I+IW G+ W +T L + H +R++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P G +AS S D IW+ + + ++ V +VSWS +G +L
Sbjct: 67 WSPC-GQ---YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCS 122
Query: 288 GDNSVSLWKENTDGAWQC 305
D SV +W+ D ++C
Sbjct: 123 RDKSVWIWEVAGDDEFEC 140
Score = 132 (51.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I G A+C D +++++L N + S K T++++ GH +
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGN-----TWSTK-TILSD--GHKRTIR 63
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
++ W+ P G LAS S+D IW +G + H++ V S++W+ + GL+
Sbjct: 64 EIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLAT 120
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
C S D ++ ++ ++ + +E + HT V W P
Sbjct: 121 C-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWHP 158
Score = 131 (51.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 68/258 (26%), Positives = 103/258 (39%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 94 ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 145
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + ++ + + +W +H S+V I +
Sbjct: 146 PHTQDVKRVVW-HPT-KDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFD 203
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
L+ +C S D TI N+ T+ V G S + D+
Sbjct: 204 ADGERLV-SC-SDDTTIKIWRAYHPGNTAGVATPDQQTVW-KCVCTVSGQHSRAIYDVSW 260
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN-------HSDWVRDVAWAPSWG 233
KL G L++ C D+ I+I+K+ D +E E H V V W P
Sbjct: 261 CKLTG----LIATACGDDGIRIFKESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNP--- 313
Query: 234 LSKCMIASCSQDRKVIIW 251
+ + SCS D + IW
Sbjct: 314 VVAGQLISCSDDGTIKIW 331
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 74/269 (27%), Positives = 115/269 (42%)
Query: 48 KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE 107
K D + + L+GH V V+++H LLAS S DR V IW + G+ +
Sbjct: 278 KPDVANHWSPCLQALEGHEAAVLSVSYSHDS--RLLASASDDRTVKIWDTETGSL--QHT 333
Query: 108 YNNHDSSVNSIAWAPKEFGLILACGSS-----DGTISFLTYMSDTNSW--------ESRK 154
H V S+ ++ L A S+ GT S + W +S+
Sbjct: 334 LEGHSDLVRSVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQL 393
Query: 155 IAAHTIGCNAVSWGPGIGSLSELDLKGSK--LGGV-----AKRLVSGGCDNLIKIWKQEG 207
+A+ + W G GSL L+G + + V ++ L S D+ +KIW G
Sbjct: 394 LASASDDSTVKIWDTGTGSLQHT-LEGHRDWVRSVIFSHDSQLLASASDDSTVKIW-DTG 451
Query: 208 DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW-TSNDYVTWTPFIMNT 266
++ T LE H DWVR V ++ S+ ++AS S DR V IW T T +
Sbjct: 452 TGSLQHT-LEGHRDWVRSVIFSHD---SR-LLASASDDRTVRIWDTEKGSHKHT---LEG 503
Query: 267 FDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+V +VS+S +L + D +V +W
Sbjct: 504 HSSLVTSVSFSHDSRLLASASNDQTVRIW 532
Score = 133 (51.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 71/262 (27%), Positives = 108/262 (41%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE + + LA+ S D TVK+++ ++ G+L L+GHS V
Sbjct: 294 GHEAAVLSVSYSHDSRLLASASDDRTVKIWD-----------TETGSLQHTLEGHSDLVR 342
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V ++H LLAS S D V IW D G + H V S+ ++ L A
Sbjct: 343 SVIFSHDS--RLLASAS-DSTVKIW--DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASA 397
Query: 131 CGSSD------GTISFLTYMSDTNSW--------ESRKIAAHTIGCNAVSWGPGIGSLSE 176
S GT S + W +S+ +A+ + W G GSL
Sbjct: 398 SDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH 457
Query: 177 LDLKGSK--LGGV-----AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWA 229
L+G + + V ++ L S D ++IW E K + LE HS V V+++
Sbjct: 458 T-LEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTE--KGSHKHTLEGHSSLVTSVSFS 514
Query: 230 PSWGLSKCMIASCSQDRKVIIW 251
S+ ++AS S D+ V IW
Sbjct: 515 HD---SR-LLASASNDQTVRIW 532
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 50/169 (29%), Positives = 79/169 (46%)
Query: 144 MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSEL-----DLKGSKLGGVAKRLVSGGCDN 198
+S + S +SR +A+ + W GSL DL S + RL++ D+
Sbjct: 300 LSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASDS 359
Query: 199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT 258
+KIW G ++ T LE H DWVR V ++ S+ ++AS S D V IW T
Sbjct: 360 TVKIW-DTGTGSLQHT-LEGHRDWVRSVIFSHD---SQ-LLASASDDSTVKIWD-----T 408
Query: 259 WTPFIMNTFD---DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304
T + +T + D V +V +S +L + D++V +W T G+ Q
Sbjct: 409 GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT-GSLQ 456
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 161 (61.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 62/262 (23%), Positives = 113/262 (43%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + ++ W+ P G LAS S+D IW +G + H++ V
Sbjct: 52 TILSD--GHKRTIREIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVK 107
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + +HT V W P
Sbjct: 108 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNSHTQDVKRVVWHP----TK 160
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE--GDKWIEETKLENHSDWVRDVAWAPSWG 233
E+ L S DN IK++ ++ + W L +H+ + W +
Sbjct: 161 EV-------------LASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTI----WGIDFD 203
Query: 234 LSKCMIASCSQDRKVIIW------------TSNDYVTWTPF--IMNTFDDVVWNVSW-SL 278
+ SCS D + IW T + W + +++VSW L
Sbjct: 204 ADGERLVSCSDDTTIKIWKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKL 263
Query: 279 TGDILTVSCGDNSVSLWKENTD 300
TG I T +CGD+ + ++KE +D
Sbjct: 264 TGLIAT-ACGDDGIRIFKETSD 284
Score = 149 (57.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 49/169 (28%), Positives = 73/169 (43%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
S ++ GH+ I + G YLA+ S D T +++ K + A L
Sbjct: 49 STKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWS------KSSGEFECN---ATL 99
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWA 121
+GH V V+W+ G LLA+CS D+ V IW + F+ N+H V + W
Sbjct: 100 EGHENEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWH 157
Query: 122 P-KEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWG 168
P KE +LA S D TI N W+ + + +HT + WG
Sbjct: 158 PTKE---VLASASYDNTIKMYAEDPVDNDWDCTATLTSHT----STIWG 199
Score = 148 (57.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G + ASC D+ + IW W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGI 171
++ I W+P G LA S D T + + + +E + + H +VSW
Sbjct: 60 RTIREIRWSP--CGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSG 115
Query: 172 GSLS 175
G L+
Sbjct: 116 GLLA 119
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 42/138 (30%), Positives = 64/138 (46%)
Query: 176 ELDLKGSK--LGGVA---KRLVSGGC--DNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA K V C D I+IW G W +T L + H +R++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P G +AS S D IW+ + + ++ V +VSWS +G +L
Sbjct: 67 WSPC-GQ---YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCS 122
Query: 288 GDNSVSLWKENTDGAWQC 305
D SV +W+ D ++C
Sbjct: 123 RDKSVWIWEVAGDDEFEC 140
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 69/258 (26%), Positives = 103/258 (39%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 94 ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 145
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + ++ D + +W +H S++ I +
Sbjct: 146 SHTQDVKRVVW-HPT-KEVLASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFD 203
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
L+ +C S D TI NS T+ V G S + D+
Sbjct: 204 ADGERLV-SC-SDDTTIKIWKAYHPGNSAGVATPDQQTVW-KCVCTLSGQHSRAIYDVSW 260
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN-------HSDWVRDVAWAPSWG 233
KL G L++ C D+ I+I+K+ D +E E H V V W P
Sbjct: 261 CKLTG----LIATACGDDGIRIFKETSDSKPDEPTFEQLTAEEGAHDQDVNSVQWNP--- 313
Query: 234 LSKCMIASCSQDRKVIIW 251
+ + SCS D + IW
Sbjct: 314 VVAGQLISCSDDGTIKIW 331
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/160 (24%), Positives = 76/160 (47%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I G A+C D +++++L + + S K T++++ GH +
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGS-----TWSTK-TILSD--GHKRTIR 63
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
++ W+ P G LAS S+D IW +G + H++ V S++W+ + GL+
Sbjct: 64 EIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLAT 120
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
C S D ++ ++ ++ + +E + +HT V W P
Sbjct: 121 C-SRDKSV-WIWEVAGDDEFECAAVLNSHTQDVKRVVWHP 158
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 161 (61.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 64/262 (24%), Positives = 111/262 (42%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + ++ W+ P G LAS S+D IW +G + H++ V
Sbjct: 52 TILSD--GHKRTIREIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVK 107
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + HT V W P
Sbjct: 108 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWHP------ 158
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE--GDKWIEETKLENHSDWVRDVAWAPSWG 233
D+ L S DN IK++ +E + W L +H+ V W +
Sbjct: 159 TKDV-----------LASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTV----WGIDFD 203
Query: 234 LSKCMIASCSQDRKVIIW------------TSNDYVTWTPF--IMNTFDDVVWNVSW-SL 278
+ SCS D + IW T W + +++VSW L
Sbjct: 204 ADGERLVSCSDDTTIKIWKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKL 263
Query: 279 TGDILTVSCGDNSVSLWKENTD 300
TG I T +CGD+ + ++KE +D
Sbjct: 264 TGLIAT-ACGDDGIRIFKETSD 284
Score = 148 (57.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G + ASC D+ + IW W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGI 171
++ I W+P G LA S D T + + + +E + + H +VSW
Sbjct: 60 RTIREIRWSP--CGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSG 115
Query: 172 GSLS 175
G L+
Sbjct: 116 GLLA 119
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/168 (27%), Positives = 71/168 (42%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
S ++ GH+ I + G YLA+ S D T +++ K + A L
Sbjct: 49 STKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWS------KSSGEFECN---ATL 99
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWA 121
+GH V V+W+ G LLA+CS D+ V IW + F+ N H V + W
Sbjct: 100 EGHENEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWH 157
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWG 168
P + +LA S D TI N W+ + + +HT + WG
Sbjct: 158 PTKD--VLASASYDNTIKMFAEEPIDNDWDCTATLTSHT----STVWG 199
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 176 ELDLKGSK--LGGVA---KRLVSGGC--DNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA K V C D I+IW G+ W +T L + H +R++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P G +AS S D IW+ + + ++ V +VSWS +G +L
Sbjct: 67 WSPC-GQ---YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCS 122
Query: 288 GDNSVSLWKENTDGAWQC 305
D SV +W+ D ++C
Sbjct: 123 RDKSVWIWEVAGDDEFEC 140
Score = 132 (51.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I G A+C D +++++L N + S K T++++ GH +
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGN-----TWSTK-TILSD--GHKRTIR 63
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
++ W+ P G LAS S+D IW +G + H++ V S++W+ + GL+
Sbjct: 64 EIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLAT 120
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
C S D ++ ++ ++ + +E + HT V W P
Sbjct: 121 C-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWHP 158
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 68/258 (26%), Positives = 103/258 (39%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 94 ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 145
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + ++ + + +W +H S+V I +
Sbjct: 146 PHTQDVKRVVW-HPT-KDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFD 203
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
L+ +C S D TI N+ T+ V G S + D+
Sbjct: 204 ADGERLV-SC-SDDTTIKIWKAYHPGNTAGVATPEQQTVW-KCVCTVSGQHSRAIYDVSW 260
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN-------HSDWVRDVAWAPSWG 233
KL G L++ C D+ I+I+K+ D +E E H V V W P
Sbjct: 261 CKLTG----LIATACGDDGIRIFKETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNP--- 313
Query: 234 LSKCMIASCSQDRKVIIW 251
+ + SCS D + IW
Sbjct: 314 VVAGQLISCSDDGTIKIW 331
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 161 (61.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 64/262 (24%), Positives = 111/262 (42%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + ++ W+ P G LAS S+D IW +G + H++ V
Sbjct: 52 TILSD--GHKRTIREIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVK 107
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + HT V W P
Sbjct: 108 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWHP------ 158
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE--GDKWIEETKLENHSDWVRDVAWAPSWG 233
D+ L S DN IK++ +E + W L +H+ V W +
Sbjct: 159 TKDV-----------LASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTV----WGIDFD 203
Query: 234 LSKCMIASCSQDRKVIIW------------TSNDYVTWTPF--IMNTFDDVVWNVSW-SL 278
+ SCS D + IW T W + +++VSW L
Sbjct: 204 ADGERLVSCSDDTTIKIWRAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKL 263
Query: 279 TGDILTVSCGDNSVSLWKENTD 300
TG I T +CGD+ + ++KE +D
Sbjct: 264 TGLIAT-ACGDDGIRIFKETSD 284
Score = 148 (57.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW-FKYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G + ASC D+ + IW W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGI 171
++ I W+P G LA S D T + + + +E + + H +VSW
Sbjct: 60 RTIREIRWSP--CGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSG 115
Query: 172 GSLS 175
G L+
Sbjct: 116 GLLA 119
Score = 145 (56.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH+ I + G YLA+ S D T +++ K + A L+GH
Sbjct: 53 ILSDGHKRTIREIRWSPCGQYLASASFDATTAIWS------KSSGEFECN---ATLEGHE 103
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEF 125
V V+W+ G LLA+CS D+ V IW + F+ N H V + W P +
Sbjct: 104 NEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD 161
Query: 126 GLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWG 168
+LA S D TI N W+ + + +HT + WG
Sbjct: 162 --VLASASYDNTIKMFAEEPIDNDWDCTATLTSHT----STVWG 199
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 176 ELDLKGSK--LGGVA---KRLVSGGC--DNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA K V C D I+IW G+ W +T L + H +R++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P G +AS S D IW+ + + ++ V +VSWS +G +L
Sbjct: 67 WSPC-GQ---YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCS 122
Query: 288 GDNSVSLWKENTDGAWQC 305
D SV +W+ D ++C
Sbjct: 123 RDKSVWIWEVAGDDEFEC 140
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 68/258 (26%), Positives = 103/258 (39%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ N GHE+ + G LATCS D +V ++ + DD A L
Sbjct: 94 ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLN 145
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWA 121
H+ V +V W HP +LAS SYD + ++ + + +W +H S+V I +
Sbjct: 146 PHTQDVKRVVW-HPT-KDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFD 203
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
L+ +C S D TI N+ T+ V G S + D+
Sbjct: 204 ADGERLV-SC-SDDTTIKIWRAYHPGNTAGVATPEQQTVW-KCVCTVSGQHSRAIYDVSW 260
Query: 182 SKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLEN-------HSDWVRDVAWAPSWG 233
KL G L++ C D+ I+I+K+ D +E E H V V W P
Sbjct: 261 CKLTG----LIATACGDDGIRIFKETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNP--- 313
Query: 234 LSKCMIASCSQDRKVIIW 251
+ + SCS D + IW
Sbjct: 314 VVAGQLISCSDDGTIKIW 331
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/160 (24%), Positives = 74/160 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I G A+C D +++++L N + K T++++ GH +
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGN-----TWGTK-TILSD--GHKRTIR 63
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
++ W+ P G LAS S+D IW +G + H++ V S++W+ + GL+
Sbjct: 64 EIRWS-P-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLAT 120
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGP 169
C S D ++ ++ ++ + +E + HT V W P
Sbjct: 121 C-SRDKSV-WIWEVAGDDEFECAAVLNPHTQDVKRVVWHP 158
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 103 (41.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 5 TEQMTLRGTLKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 63
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 64 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 108
Score = 102 (41.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 121 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 176
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 177 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 225
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 291 SLAWSADGQTLFAGYTDNLVRVWQ 314
Score = 42 (19.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 259 IKIWDLEGKIIVDELKQE 276
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 163 (62.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 84/299 (28%), Positives = 128/299 (42%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH D I G LA+ S+D T+K++ D S G L L+GHS V
Sbjct: 39 GHSDWIETVTFSPDGRLLASGSNDTTIKLW---------DPAS--GGLKQTLEGHSSSVQ 87
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
VA++ P G LLAS S D + +W + + K+ H V S+A++P A
Sbjct: 88 SVAFS-PN-GQLLASGSSDTTIKLWNSASDS-LKH-TMEGHSDRVESVAFSPNGQLWNPA 143
Query: 131 CGSSDGTISFLT--YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK---LG 185
GS TI + +S S + + +A+ + W L L G L
Sbjct: 144 IGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHT-LGGHSNWVLP 202
Query: 186 GV----AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241
V + L SG D IK+W ++ T LE HS+ + +A++P+ L +AS
Sbjct: 203 LVFSPDGRLLASGSNDATIKLWDPPSGS-LKHT-LEGHSNKIESLAFSPNGQL----LAS 256
Query: 242 CSQDRKVIIWTSNDYVTWT-PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
S D + +W D T + + D+V +V +S +L GDN++ LW T
Sbjct: 257 GSSDATIKLW---DTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPAT 312
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 162 (62.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 72/272 (26%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DHT K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHTGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVATGYCVK--TFTGHREWVRMVR--PNQDGTLIASSSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS---KLGGVAKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P + L+ GS K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SNDYVTWTPFIM 264
+ L H +WVR V P K I SC+ D+ + IW N T T +
Sbjct: 326 SIGMCL--MTLVGHDNWVRGVLVHPG---GK-YIVSCADDKTLRIWDYKNKRCTKT---L 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
+ + V ++ + T + D +V +W+
Sbjct: 377 SAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 132 (51.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 45/148 (30%), Positives = 69/148 (46%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFN-LDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
H++ + + G YLAT SSD T ++ LD N K + H+ L+ H PV
Sbjct: 223 HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDN-KVELKHT--------LESHQNPVS 273
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V+W+ P T L +C + +W D G + NN +V+S AW P L+
Sbjct: 274 FVSWS-PD-DTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLV-- 329
Query: 131 CGSSD---GTISFLTYMSDTNSWESRKI 155
CGSSD G + + T ++ +W +I
Sbjct: 330 CGSSDPERGIVMWDTDGNEIKAWRGTRI 357
Score = 75 (31.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 27/106 (25%), Positives = 46/106 (43%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+V+ C I +W G+ W + K H + V + GL IAS S+D +V I
Sbjct: 413 IVNLSCQE-IHLWDLAGE-WKQPLKFSGHRQ-SKYVIRSCFGGLDSSFIASGSEDSQVYI 469
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLW 295
W + T +++ V VSW+ + S D+ ++ +W
Sbjct: 470 WNLKN--TKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>ZFIN|ZDB-GENE-060503-525 [details] [associations]
symbol:elp2 "elongation protein 2 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0043248
"proteasome assembly" evidence=ISS] [GO:0061133 "endopeptidase
activator activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR002350
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00280 SMART:SM00320 ZFIN:ZDB-GENE-060503-525 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998
GO:GO:0000502 GO:GO:0061133 GO:GO:0043248 GO:GO:0006368
EMBL:BX927389 EMBL:BC124388 IPI:IPI00498292 RefSeq:NP_001038390.1
UniGene:Dr.77407 ProteinModelPortal:Q05AM5 STRING:Q05AM5
Ensembl:ENSDART00000122625 GeneID:560338 KEGG:dre:560338 CTD:55250
GeneTree:ENSGT00390000000916 HOGENOM:HOG000200623
HOVERGEN:HBG087208 InParanoid:Q05AM5 KO:K11374 OrthoDB:EOG40K7Z8
NextBio:20883393 ArrayExpress:Q05AM5 Bgee:Q05AM5 Uniprot:Q05AM5
Length = 821
Score = 164 (62.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 59/195 (30%), Positives = 88/195 (45%)
Query: 62 LKGHSGPVWQVAWAH-PQFG--TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118
L H+G V V W H P L S D VI+W +G + + H V ++
Sbjct: 52 LNKHTGRVNAVQWVHEPDCSPENQLISGGSDNNVIVWEKLDGKFRACAVCSGHSGPVCAV 111
Query: 119 -AWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG-IGSLSE 176
A + L++A SSD T+ TY SD AA + V++G G + +S
Sbjct: 112 DAVSLSSSHLLVASASSDSTVKLWTYSSD---------AAECL--QTVAFGSGFMMDVSL 160
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSK 236
L GS++ +A GG D+ + ++ Q ++ L H DWVR V WA G +
Sbjct: 161 ALLPGSRVPVLA----CGGDDSRVHLYVQLSGQFQRVLTLTGHEDWVRGVEWANKDG--E 214
Query: 237 CMIASCSQDRKVIIW 251
+ASCSQD + +W
Sbjct: 215 LWLASCSQDCLIRVW 229
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 69/301 (22%), Positives = 107/301 (35%)
Query: 31 CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQV-AWAHPQFGTLLASCSYD 89
CS ++ + D N+ + K A GHSGPV V A + L+AS S D
Sbjct: 70 CSPENQLISGGSDNNVIVWEKLDGKFRACAVCSGHSGPVCAVDAVSLSSSHLLVASASSD 129
Query: 90 RKVIIWR--GDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT 147
V +W D + + + S+A P +LACG D + +S
Sbjct: 130 STVKLWTYSSDAAECLQTVAFGSGFMMDVSLALLPGSRVPVLACGGDDSRVHLYVQLSGQ 189
Query: 148 NSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGV----AKRLVSGGC--DNLIK 201
+ H V W G L L V AK D +IK
Sbjct: 190 FQ-RVLTLTGHEDWVRGVEWANKDGELWLASCSQDCLIRVWRLFAKTAAEPDLQTDGIIK 248
Query: 202 ----IWKQEGDKWIE--ETKLENHSDWVRDVAWAPSW--GLS---KCMIASCSQDRKVII 250
I++ G+++ ET L H +WV + W P G S + S S D+ +I+
Sbjct: 249 MKENIFQVSGEEFAVTLETVLAGHENWVYGIHWQPPSVKGDSVEQSLKLLSASMDKTMIL 308
Query: 251 W-TSNDYVTWTPFIM------NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 303
W D W + NT + S G ++ ++ LW +++ W
Sbjct: 309 WGPEEDSGMWVEMVRVGEVGGNTLG--FYGCQMSPDGSMILAHAFHGALHLWHHDSNQEW 366
Query: 304 Q 304
+
Sbjct: 367 R 367
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 122 (48.0 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 44/145 (30%), Positives = 62/145 (42%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H D + + G YLA+ S D T +F++ NLK+ + L GH V
Sbjct: 212 HSDEVWQISYSHNGRYLASASKDKTAIIFDVV-NLKR----------VFRLIGHIDTVAY 260
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC 131
+ W+ P LL SCS D+ VI+W G + Y+ H SV+ W P GL
Sbjct: 261 IRWS-PDDRYLL-SCSCDKSVILWDAFTGEKLRDYK---HGFSVSCCCWLPD--GLSFIT 313
Query: 132 GSSDGTISFLTYMSDT-NSWESRKI 155
GS D I+ + + WE I
Sbjct: 314 GSPDCHITHWSLNGEILYKWEDVNI 338
Score = 83 (34.3 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 27/78 (34%), Positives = 35/78 (44%)
Query: 179 LKGSKLGGVAKRLV-SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237
L GS GG V SG D+ I+IW +E K + L H V VA+ P +
Sbjct: 430 LIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLL--ATLSGHVKCVNYVAYNP---VDPY 484
Query: 238 MIASCSQDRKVIIWTSND 255
AS D V IW++ D
Sbjct: 485 QFASAGDDNTVRIWSNKD 502
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 103 (41.3 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ T+ LKGHSG V Q+A PQF ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTVRGTLKGHSGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 96 (38.9 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + ++H++WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTIQD--DSHTEWVSCVRFSPN--SSNPIIVSCGWDKM 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 102 (41.0 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E+HS+WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPN--SSNPIIVSCGWDKL 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VNVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 97 (39.2 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ TL LKGH+G V Q++ AH + L SC D+ +I+W+ D N+
Sbjct: 2 TEQMTLRGTLKGHNGWVTQLS-AHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G GS DGT+ + T + R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTTT---RRFVGHT 105
Score = 45 (20.9 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 273 NVSWSLTGDILTVSCGDNSVSLWK 296
+++WS G L DN V +W+
Sbjct: 288 SLAWSADGQTLFAGYTDNLVRVWQ 311
Score = 42 (19.8 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 200 IKIWKQEGDKWIEETKLE 217
IKIW EG ++E K E
Sbjct: 256 IKIWDLEGKIIVDELKQE 273
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 103 (41.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
GH G ++ +A + P TL+A+ D K +W+ NG+W E H SV+ +A++
Sbjct: 68 GHKGELYALACS-PTDATLVATGGGDDKAFLWKIGNGDWAA--ELPGHKDSVSCLAFSYD 124
Query: 124 EFGLILACGSSDGTISFLTYMSDT 147
G +LA G DG + S T
Sbjct: 125 --GQLLASGGLDGVVQIFDASSGT 146
Score = 99 (39.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 29/104 (27%), Positives = 51/104 (49%)
Query: 192 VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
+SG D + I K + + L +H+D V V ++PS + + A+ D+K+IIW
Sbjct: 258 ISGSKDGSVHIVNIVTGKVV--SSLNSHTDSVECVKFSPS-SATIPLAATGGMDKKLIIW 314
Query: 252 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
D TP + ++ V +++W T L C + +VS+W
Sbjct: 315 ---DLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIW 355
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 140 (54.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 55/201 (27%), Positives = 83/201 (41%)
Query: 22 DYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT 81
DY G + K F + + ++D+ + ++ L GH V V+W+ G
Sbjct: 105 DY-GEEETLAQGNKNTKNFGAEEDREEDEDDEWRFAVL--LDGHDSEVKSVSWSAS--GM 159
Query: 82 LLASCSYDRKVIIWR----GDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT 137
LLA+CS D+ + IW GDN N+ H+ V +AW P E LA GS D T
Sbjct: 160 LLATCSRDKSIWIWEDLEDGDN-NFETVAVMQEHEGDVKCVAWHPAEE--CLASGSYDDT 216
Query: 138 ISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWG-----P------GIGSLSELDLKGSKLG 185
I + D + W + I HT + W P G+ E L
Sbjct: 217 IRI--WREDIDDWGQVACIKGHTGTVWGIDWEDAENVPFPSTSNGVSGQEEEWKTWHALS 274
Query: 186 GVAKRLVSGGCDNLIKIWKQE 206
G RLVS D +++W+++
Sbjct: 275 G--PRLVSCSHDQSVRVWRRQ 293
Score = 136 (52.9 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
L+D GH+ + G+ LATCS D ++ ++ +L+ D++ + +A ++ H
Sbjct: 141 LLD-GHDSEVKSVSWSASGMLLATCSRDKSIWIWE---DLEDGDNNFET---VAVMQEHE 193
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
G V VAW HP LAS SYD + IWR D +W + H +V I W E
Sbjct: 194 GDVKCVAW-HPA-EECLASGSYDDTIRIWREDIDDWGQVACIKGHTGTVWGIDWEDAE 249
Score = 116 (45.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 30/108 (27%), Positives = 53/108 (49%)
Query: 204 KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS---NDYVTWT 260
+ E D+W L+ H V+ V+W+ S G+ ++A+CS+D+ + IW D T
Sbjct: 130 EDEDDEWRFAVLLDGHDSEVKSVSWSAS-GM---LLATCSRDKSIWIWEDLEDGDNNFET 185
Query: 261 PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD--GAWQCI 306
+M + V V+W + L D+++ +W+E+ D G CI
Sbjct: 186 VAVMQEHEGDVKCVAWHPAEECLASGSYDDTIRIWREDIDDWGQVACI 233
Score = 80 (33.2 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 25/84 (29%), Positives = 35/84 (41%)
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG-LI 128
W A HP L+A+CS D+ V ++ N H S+ + AW P G +
Sbjct: 31 WLTA-PHPTL-PLVATCSSDKTVRVYSLVNFRLLSTIS-GGHKRSIRTCAWKPNVSGESV 87
Query: 129 LACGSSDGTISFLTYMSDTNSWES 152
LA GS D T+ D E+
Sbjct: 88 LATGSFDATVGIWRRWDDYGEEET 111
Score = 58 (25.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 190 RLVSGGCDNLIKIWKQEG--DKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDR 246
+L + G ++ I + G + W E+ L + H + VAW+ GL +AS D
Sbjct: 297 QLNTAGASSIPSIIRPSGTDETWEEDVVLPHAHELPIYAVAWSRRTGL----LASVGADG 352
Query: 247 KVIIWTSNDYVTWT-PFIMNTFDDVVWNV 274
+++++ + T P MNT D+V N+
Sbjct: 353 RLVVYEERFVSSHTKPQAMNT-DEVSPNL 380
>UNIPROTKB|A4R7U3 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:242507 "Magnaporthe oryzae 70-15"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM001234 OrthoDB:EOG4CVKH5 RefSeq:XP_003716845.1
ProteinModelPortal:A4R7U3 STRING:A4R7U3 GeneID:2676736
KEGG:mgr:MGG_03150 Uniprot:A4R7U3
Length = 446
Score = 153 (58.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 51/156 (32%), Positives = 70/156 (44%)
Query: 4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
+ LV GHE+ I A G YLATCS D ++ ++ D + D + +A L
Sbjct: 136 EFTLVLEGHENEIKSAAFSPSGQYLATCSRDKSIWIWE-DVGANEGDDEWET---VAVLT 191
Query: 64 GHSGPVWQVAWAHPQFGT--------LLASCSYDRKVIIWRGD-NGNWFKYYEYNNHDSS 114
H G V VAW G +LAS SYD + IWR D +G W H S+
Sbjct: 192 EHDGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAVLEGHSST 251
Query: 115 VNSIAWAPK----EFGLILACGSSDGTISFLTYMSD 146
V + W PK +F +++ S+D TI T D
Sbjct: 252 VWGVQWEPKVDNTKFPRLISW-SADKTIRVWTLEQD 286
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 44/163 (26%), Positives = 70/163 (42%)
Query: 98 DNGN-WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT---NSWESR 153
DN + W H++ + S A++P G LA S D +I + + WE+
Sbjct: 130 DNDDDWEFTLVLEGHENEIKSAAFSPS--GQYLATCSRDKSIWIWEDVGANEGDDEWETV 187
Query: 154 KIAA-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGD-KW 210
+ H V+W P D+ G + + L S D+ I+IW+++GD +W
Sbjct: 188 AVLTEHDGDVKCVAWCP--------DVPGRNISSYSPDVLASASYDDTIRIWREDGDGEW 239
Query: 211 IEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWT 252
LE HS V V W P +K + S S D+ + +WT
Sbjct: 240 ACVAVLEGHSSTVWGVQWEPKVDNTKFPRLISWSADKTIRVWT 282
Score = 119 (46.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 204 KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT---SNDYVT-W 259
K D W LE H + ++ A++PS G +A+CS+D+ + IW +N+ W
Sbjct: 129 KDNDDDWEFTLVLEGHENEIKSAAFSPS-GQ---YLATCSRDKSIWIWEDVGANEGDDEW 184
Query: 260 -TPFIMNTFDDVVWNVSW----------SLTGDILTVSCGDNSVSLWKENTDGAWQCITE 308
T ++ D V V+W S + D+L + D+++ +W+E+ DG W C+
Sbjct: 185 ETVAVLTEHDGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAV 244
Query: 309 M-GKTS 313
+ G +S
Sbjct: 245 LEGHSS 250
Score = 47 (21.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEE-TK 215
LV+ D+ +W+ EGD +EE TK
Sbjct: 84 LVTASFDSTAGLWRWEGDVPLEEGTK 109
Score = 43 (20.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWK 204
G + GV + LV+ G D +++ W+
Sbjct: 416 GVEQRGVEEMLVTTGDDGIVQAWQ 439
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 128 (50.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 5 LNLVDTGHEDMIH--DAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
+N+VD+ + + E D L LA D + R ++ D + K I
Sbjct: 42 INIVDSTDSSVKSTIEGESDTLTA-LALSPDDKLLFSAGHSRQIRVWDLETLK--CIRSW 98
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
KGH GPV +A H G LLA+ DRKV++W D G F + + H V+SI + P
Sbjct: 99 KGHEGPVMGMA-CHAS-GGLLATAGADRKVLVWDVDGG--FCTHYFRGHKGVVSSILFHP 154
Query: 123 KEFGLILACGSSDGTI 138
IL GS D T+
Sbjct: 155 DSNKNILISGSDDATV 170
Score = 99 (39.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 57/215 (26%), Positives = 87/215 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE + G LAT +D V V+++D G +GH G V
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDG-----------GFCTHYFRGHKGVVS 148
Query: 71 QVAWAHPQFG-TLLASCSYDRKVIIWRGDNGNWFK--YYEYNNHDSSVNSIAWAPKEFGL 127
+ + HP +L S S D V +W + N K H S+V SIA + E GL
Sbjct: 149 SILF-HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS--EDGL 205
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRK-IAAHTI--GCNAVSWGPGIGS-LSELDLKGSK 183
L D ++ + D + + + +A + + VS G S ++ LD K SK
Sbjct: 206 TLFSAGRDKVVN----LWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLDQKKSK 261
Query: 184 L---GGVAKRLVSGGCDNLIKIWKQEGDKWIEETK 215
A ++ G +++IWK EG + E K
Sbjct: 262 KKESDSQATYFITVGERGVVRIWKSEGSICLYEQK 296
Score = 79 (32.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 53/200 (26%), Positives = 77/200 (38%)
Query: 123 KEFGLIL-ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
KE L L C SS G + +T D R A + C V G L+ K
Sbjct: 401 KEVVLSLDTCVSSSGNVLIVTGSKDKTV---RLWNATSKSCIGVGTGHNGDILAVAFAKK 457
Query: 182 SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241
S VSG D +K+W +G I E E + R V A ++ +A
Sbjct: 458 S-----FSFFVSGSGDRTLKVWSLDG---ISEDSEEPINLKTRSVVAAHDKDINSVAVAR 509
Query: 242 -----C--SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL 294
C S+DR IW D V + +++V +S + + GD +V +
Sbjct: 510 NDSLVCTGSEDRTASIWRLPDLVHVVT--LKGHKRRIFSVEFSTVDQCVMTASGDKTVKI 567
Query: 295 WKENTDGAWQCI-TEMGKTS 313
W + DG+ C+ T G TS
Sbjct: 568 WAIS-DGS--CLKTFEGHTS 584
Score = 64 (27.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+ VS G D L+K+W + I + H D V WA + G MIA+ D +
Sbjct: 597 QFVSCGADGLLKLWNVNTSECI--ATYDQHEDKV----WALAVGKKTEMIATGGGDAVIN 650
Query: 250 IW 251
+W
Sbjct: 651 LW 652
Score = 64 (27.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 21/103 (20%), Positives = 41/103 (39%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY 256
D +KIW ++ E H+ V ++ G SC D + +W N
Sbjct: 562 DKTVKIWAISDGSCLKT--FEGHTSSVLRASFITD-GTQ---FVSCGADGLLKLWNVNTS 615
Query: 257 VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
+ + +D VW ++ +++ GD ++LW ++T
Sbjct: 616 ECIATY--DQHEDKVWALAVGKKTEMIATGGGDAVINLWHDST 656
Score = 58 (25.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETK--LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
L+SG D +++W ++ +E H V +A + GL+ + S +D+ V
Sbjct: 161 LISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED-GLT---LFSAGRDKVV 216
Query: 249 IIWTSNDY 256
+W +DY
Sbjct: 217 NLWDLHDY 224
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 184 LGGVAKRLVSGGCDNLIKIW 203
+G + + +GG D +I +W
Sbjct: 633 VGKKTEMIATGGGDAVINLW 652
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 154 (59.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 92 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 147
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 148 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 203
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 204 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 260
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 261 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 311
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 312 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q5EBD9 [details] [associations]
symbol:elp2 "Elongator complex protein 2" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=ISS] [GO:0010950 "positive
regulation of endopeptidase activity" evidence=ISS] [GO:0043248
"proteasome assembly" evidence=ISS] [GO:0061133 "endopeptidase
activator activity" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0000502 GO:GO:0061133 GO:GO:0043248
GO:GO:0006368 CTD:55250 GeneTree:ENSGT00390000000916
HOGENOM:HOG000200623 HOVERGEN:HBG087208 KO:K11374 EMBL:BC089753
RefSeq:NP_001015799.1 UniGene:Str.21718 ProteinModelPortal:Q5EBD9
STRING:Q5EBD9 Ensembl:ENSXETT00000041059 GeneID:548516
KEGG:xtr:548516 Xenbase:XB-GENE-5752362 Bgee:Q5EBD9 Uniprot:Q5EBD9
Length = 824
Score = 158 (60.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 57/205 (27%), Positives = 90/205 (43%)
Query: 54 QKGTLIAELKGHSGPVWQVAWAHPQ---FGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN 110
QK +I+ L GH+G V V W T L S D+KVIIW + +
Sbjct: 44 QKNVVISTLNGHTGRVNCVHWVQKNDCSAETELVSGGSDKKVIIWAIEKNKCEQPVAAEG 103
Query: 111 HDSSVNSI--AWAPK-EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167
H VN++ + + E L++ +SD T+ W R + + +S+
Sbjct: 104 HTEVVNAVHAVYTQRSENELLIVSAASDCTVRL---------WLRRNVKTECL--QTLSF 152
Query: 168 GPGIGSLSELDLKGSKL-GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV 226
G G LD+ S L G + L G D+ I ++ + +++ + L H DW+R V
Sbjct: 153 GKGF----VLDVCISFLPGSLVPVLACGADDSRIHLYVLQNEQFEKTQVLHGHEDWIRGV 208
Query: 227 AWAPSWGLSKCMIASCSQDRKVIIW 251
WA + G +ASC+QD + IW
Sbjct: 209 EWAVT-G-QNLFLASCAQDCLIRIW 231
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 70/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DHT K+ + D +K D Q I + GH V VA P G + S S
Sbjct: 157 SFDHTGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSASR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P ++SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDI 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SNDYVTWTPFIM 264
+ L H +WVR V + S G I SC+ D+ + +W N T +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVWDFKNKRCMKT---L 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>POMBASE|SPCC895.06 [details] [associations]
symbol:elp2 "elongator complex subunit Elp2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002098 "tRNA wobble
uridine modification" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0033588
"Elongator holoenzyme complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC895.06 GO:GO:0005829
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0002098 GO:GO:0033588
HOGENOM:HOG000200623 KO:K11374 PIR:T41644 RefSeq:NP_588047.1
ProteinModelPortal:O94533 STRING:O94533 EnsemblFungi:SPCC895.06.1
GeneID:2538986 KEGG:spo:SPCC895.06 OMA:HGYDMIC OrthoDB:EOG42C1HT
NextBio:20800161 Uniprot:O94533
Length = 760
Score = 131 (51.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 49/191 (25%), Positives = 78/191 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNL-------KKDDSHSQKGTLIAELK 63
GHED + + + + S+D ++ V+ D N + + S G+ A
Sbjct: 266 GHEDWVMSVDWHPTKEMILSSSADSSMIVWEPDTNTGIWVVTGRMGEMASSHGSTTAT-- 323
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
G +G W W +P G + +W+ D G W + + H SV +AW P
Sbjct: 324 GSAGGFWGGLW-NPN-GNCVVCWGRTGGWRLWKQDAGQWLQLPSISGHTKSVKGVAWDP- 380
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPG-IGSLSELDLKG 181
E L+ G+ T F + D N+W E + H ++S P IG LS D K
Sbjct: 381 EGKFYLSAGTDQTTRLFARFKKD-NAWHEMARPQIHGYDLTSISCMPSRIGFLSCADEKV 439
Query: 182 SKLGGVAKRLV 192
S++ K +V
Sbjct: 440 SRVFKFPKTIV 450
Score = 69 (29.3 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 27/113 (23%), Positives = 49/113 (43%)
Query: 191 LVSGGCDNLIKIWKQEGD--KWIEETKLENHSDWVRDVAWAPS-WGLSKCMIASCSQDRK 247
++S G D L+ + +Q + + ++ HS + D +WAP G A+ S+D+
Sbjct: 593 ILSAGRDRLVCLHEQAENLLDYNNFASIKAHSRIIWDASWAPKEMGY---FFATASRDKF 649
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWS--LTGDILTVSCGDNS--VSLWK 296
V W ND F D V V ++ D L ++ G + + +W+
Sbjct: 650 VKFWKINDNKKICDVAALQFSDAVTAVDFAPFFHNDELLLAVGTEAGKIFIWR 702
Score = 68 (29.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 22/97 (22%), Positives = 40/97 (41%)
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SNDYVTWTPFI- 263
E W ++ L+ HS V + ++P I S +DR V + + + + + F
Sbjct: 564 ETQSWNQQQVLKGHSLTVTTIKFSPD----DRYILSAGRDRLVCLHEQAENLLDYNNFAS 619
Query: 264 MNTFDDVVWNVSWSLT--GDILTVSCGDNSVSLWKEN 298
+ ++W+ SW+ G + D V WK N
Sbjct: 620 IKAHSRIIWDASWAPKEMGYFFATASRDKFVKFWKIN 656
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 151 (58.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 69/272 (25%), Positives = 110/272 (40%)
Query: 32 SSDHTVKVF---NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY 88
S DH+ K+ + D +K D Q I + GH V VA P G + S +
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVA-IMPN-GDHIVSAAR 212
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D+ + +W G K + H V + P + G ++A S+D T+ +
Sbjct: 213 DKTIKMWEVQTGYCVK--TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 149 SWESRKIAAHTIGCNAVSWGP--GIGSLSELDLKGSKLGGV-AKRLVSGGCDNLIKIWKQ 205
E R+ H + C +SW P S+SE +K G L+SG D IK+W
Sbjct: 269 KAELRE-HEHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IM 264
+ L H +WVR V + S G I SC+ D+ + +W DY +
Sbjct: 326 STGMCL--MTLVGHDNWVRGVLFH-SGGK---FILSCADDKTLRVW---DYKNKRCMKTL 376
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
N + V ++ + T + D +V +W+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 115 (45.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE ++ + G LA+ D + ++N+ + D++ A LKGHSG V
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC---DNY-------ATLKGHSGAV 112
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++ + G++L S S D+ V +W + G K H S VNS P G L
Sbjct: 113 MELHYNTD--GSMLFSASTDKTVAVWDSETGERVK--RLKGHTSFVNSCY--PARRGPQL 166
Query: 130 AC-GSSDGTISFLTYMSDTNSWESRKIAA 157
C GS DGT+ W+ RK AA
Sbjct: 167 VCTGSDDGTVKL---------WDIRKKAA 186
Score = 77 (32.2 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+++SGG DN IK+W +K + T + H+D V ++ + S G + S + D V
Sbjct: 207 QIISGGIDNDIKVWDLRQNK-LTYT-MRGHADSVTGLSLS-SEG---SYLLSNAMDNTVR 260
Query: 250 IWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W + + ++ F+ + SWS G + D V +W
Sbjct: 261 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 312
Score = 56 (24.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWK------QEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
G L L+S DN +++W +E I + + N + +W+P G
Sbjct: 240 GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-G- 297
Query: 235 SKCMIASCSQDRKVIIW 251
SK IA+ S DR V +W
Sbjct: 298 SK--IAAGSADRFVYVW 312
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 115 (45.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE ++ + G LA+ D + ++N+ + D++ A LKGHSG V
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC---DNY-------ATLKGHSGAV 113
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++ + G++L S S D+ V +W + G K H S VNS P G L
Sbjct: 114 MELHYNTD--GSMLFSASTDKTVAVWDSETGERVK--RLKGHTSFVNSCY--PARRGPQL 167
Query: 130 AC-GSSDGTISFLTYMSDTNSWESRKIAA 157
C GS DGT+ W+ RK AA
Sbjct: 168 VCTGSDDGTVKL---------WDIRKKAA 187
Score = 77 (32.2 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+++SGG DN IK+W +K + T + H+D V ++ + S G + S + D V
Sbjct: 208 QIISGGIDNDIKVWDLRQNK-LTYT-MRGHADSVTGLSLS-SEG---SYLLSNAMDNTVR 261
Query: 250 IWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W + + ++ F+ + SWS G + D V +W
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 313
Score = 56 (24.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWK------QEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
G L L+S DN +++W +E I + + N + +W+P G
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-G- 298
Query: 235 SKCMIASCSQDRKVIIW 251
SK IA+ S DR V +W
Sbjct: 299 SK--IAAGSADRFVYVW 313
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 115 (45.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE ++ + G LA+ D + ++N+ + D++ A LKGHSG V
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC---DNY-------ATLKGHSGAV 113
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++ + G++L S S D+ V +W + G K H S VNS P G L
Sbjct: 114 MELHYNTD--GSMLFSASTDKTVAVWDSETGERVK--RLKGHTSFVNSCY--PARRGPQL 167
Query: 130 AC-GSSDGTISFLTYMSDTNSWESRKIAA 157
C GS DGT+ W+ RK AA
Sbjct: 168 VCTGSDDGTVKL---------WDIRKKAA 187
Score = 77 (32.2 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+++SGG DN IK+W +K + T + H+D V ++ + S G + S + D V
Sbjct: 208 QIISGGIDNDIKVWDLRQNK-LTYT-MRGHADSVTGLSLS-SEG---SYLLSNAMDNTVR 261
Query: 250 IWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W + + ++ F+ + SWS G + D V +W
Sbjct: 262 VWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 313
Score = 56 (24.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWK------QEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
G L L+S DN +++W +E I + + N + +W+P G
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPD-G- 298
Query: 235 SKCMIASCSQDRKVIIW 251
SK IA+ S DR V +W
Sbjct: 299 SK--IAAGSADRFVYVW 313
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 115 (45.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE ++ + G LA+ D + ++N+ + D++ A LKGHSG V
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC---DNY-------ATLKGHSGAV 113
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++ + G++L S S D+ V +W + G K H S VNS P G L
Sbjct: 114 MELHYNTD--GSMLFSASTDKTVAVWDSETGERVK--RLKGHTSFVNSCY--PARRGPQL 167
Query: 130 AC-GSSDGTISFLTYMSDTNSWESRKIAA 157
C GS DGT+ W+ RK AA
Sbjct: 168 VCTGSDDGTVKL---------WDIRKKAA 187
Score = 77 (32.2 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+++SGG DN IK+W +K + T + H+D V ++ + S G + S + D V
Sbjct: 208 QIISGGIDNDIKVWDLRQNK-LTYT-MRGHADSVTGLSLS-SEG---SYLLSNAMDNTVR 261
Query: 250 IWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W + + ++ F+ + SWS G + D V +W
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 313
Score = 56 (24.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWK------QEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
G L L+S DN +++W +E I + + N + +W+P G
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-G- 298
Query: 235 SKCMIASCSQDRKVIIW 251
SK IA+ S DR V +W
Sbjct: 299 SK--IAAGSADRFVYVW 313
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 115 (45.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE ++ + G LA+ D + ++N+ + D++ A LKGHSG V
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC---DNY-------ATLKGHSGAV 113
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++ + G++L S S D+ V +W + G K H S VNS P G L
Sbjct: 114 MELHYNTD--GSMLFSASTDKTVAVWDSETGERVK--RLKGHTSFVNSCY--PARRGPQL 167
Query: 130 AC-GSSDGTISFLTYMSDTNSWESRKIAA 157
C GS DGT+ W+ RK AA
Sbjct: 168 VCTGSDDGTVKL---------WDIRKKAA 187
Score = 77 (32.2 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+++SGG DN IK+W +K + T + H+D V ++ + S G + S + D V
Sbjct: 208 QIISGGIDNDIKVWDLRQNK-LTYT-MRGHADSVTGLSLS-SEG---SYLLSNAMDNTVR 261
Query: 250 IWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W + + ++ F+ + SWS G + D V +W
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 313
Score = 56 (24.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWK------QEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
G L L+S DN +++W +E I + + N + +W+P G
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-G- 298
Query: 235 SKCMIASCSQDRKVIIW 251
SK IA+ S DR V +W
Sbjct: 299 SK--IAAGSADRFVYVW 313
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 130 (50.8 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHD 112
+ G+ + L GHS W ++ G LAS S+D VI+W GN + +++ +H
Sbjct: 1551 ASNGSELLTLVGHSN--WISCFSFSDDGKTLASSSWDNTVIVWDLIVGN--QIHQFKDHS 1606
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG 172
+VN ++P L+++C I F T SD N + + + +AH+ N+ W P G
Sbjct: 1607 RAVNYCEFSPTANNLLMSCAWDSSIIIFNT--SDKNIFRNFR-SAHSKPVNSCCWSPD-G 1662
Query: 173 SL 174
+L
Sbjct: 1663 TL 1664
Score = 121 (47.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 44/134 (32%), Positives = 63/134 (47%)
Query: 5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG 64
L LV GH + I G LA+ S D+TV V++L G I + K
Sbjct: 1558 LTLV--GHSNWISCFSFSDDGKTLASSSWDNTVIVWDLI-----------VGNQIHQFKD 1604
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
HS V ++ P LL SC++D +II+ + N F+ + + H VNS W+P
Sbjct: 1605 HSRAVNYCEFS-PTANNLLMSCAWDSSIIIFNTSDKNIFRNFR-SAHSKPVNSCCWSPD- 1661
Query: 125 FGLILACGSSDGTI 138
G ++A S DGTI
Sbjct: 1662 -GTLIASSSWDGTI 1674
Score = 80 (33.2 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY 256
D LIK+W + K E T + H+D + +++ P+ ++C + SCS D +W+ +
Sbjct: 1849 DLLIKVWNVQTHK-AEYTIEKAHNDPINCISFNPT---NECELISCSDDYSTKVWSR--F 1902
Query: 257 VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
T T + + + +S G + D S++++
Sbjct: 1903 TTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVY 1941
Score = 63 (27.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 31/109 (28%), Positives = 46/109 (42%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+K+LVSGG D +++W + K E L+ HS + + K +I S S D
Sbjct: 1968 SKKLVSGGWDFNLRVWNIKTQK--ELLCLKGHSSSIEKAFFTKD---QKYII-SASFDGS 2021
Query: 248 VIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W + T T DVV S +G I + S D + W
Sbjct: 2022 VKVWDAQFGSEITSLRHQTRISDVV--SSSDASGRIFS-SSDDGIIKSW 2067
Score = 50 (22.7 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 266 TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
+FDD V +V +S +GD+L V ++ D
Sbjct: 2276 SFDDWVESVEFSTSGDLLAAGSRTKQVKIFSPLND 2310
Score = 45 (20.9 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
+L+ H+DWV ++P SK +++ D + +W
Sbjct: 1951 RLKGHTDWVNFCTFSPD---SKKLVSG-GWDFNLRVW 1983
Score = 43 (20.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 19/112 (16%), Positives = 45/112 (40%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+V+G D K+W + + W +A++P+ L C+ R +
Sbjct: 1755 IVTGSDDATAKVWSSTLGTQLTNFLIPGDC-WANCLAFSPTQPLLAVGATDCTV-RLFDV 1812
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
++ Y +T + ++++S +G+++ + D + +W T A
Sbjct: 1813 SSNTIYREVAKLHGHT--RAITSITFSPSGNLIASTSEDLLIKVWNVQTHKA 1862
Score = 42 (19.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 234 LSKCMIASCSQDRKVIIW---TS---NDYVTWTP 261
L + S S DR +I+W TS N+++ +P
Sbjct: 2370 LDSTRLVSVSNDRSLIVWNFSTSSIENEFIHQSP 2403
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 98 (39.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 189 KRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++VSG D IK+W G K+ + E H++WV V ++P+ S +I SC D+
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTIQD--EGHTEWVSCVRFSPN--SSNPIIVSCGWDKM 173
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
V +W + T I +T + V+ S G + D LW N
Sbjct: 174 VKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Score = 93 (37.8 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
+++ T+ LKGHSG V Q+A P++ ++ S S D+ +I+W+ D N+
Sbjct: 2 TEQMTVRGTLKGHSGWVTQIATT-PKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLK 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT 159
H V+ + + G G+ DGT+ T +R+ HT
Sbjct: 61 GHSHFVSDVVISSD--GQFALSGAWDGTLRLWDL---TTGLTTRRFVGHT 105
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 115 (45.5 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE ++ + G LA+ D + ++N+ + D++ A LKGHSG V
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC---DNY-------ATLKGHSGAV 112
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++ + G++L S S D+ V +W + G K H S VNS P G L
Sbjct: 113 MELHYNTD--GSMLFSASTDKTVAVWDSETGERVK--RLKGHTSFVNSCY--PARRGPQL 166
Query: 130 AC-GSSDGTISFLTYMSDTNSWESRKIAA 157
C GS DGT+ W+ RK AA
Sbjct: 167 VCTGSDDGTVKL---------WDIRKKAA 186
Score = 77 (32.2 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+++SGG DN IK+W +K + T + H+D V ++ + S G + S + D V
Sbjct: 207 QIISGGIDNDIKVWDLRQNK-LTYT-MRGHADSVTGLSLS-SEG---SYLLSNAMDNTVR 260
Query: 250 IWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W + + ++ F+ + SWS G + D V +W
Sbjct: 261 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 312
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWK------QEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
G L L+S DN +++W +E I + + N + +W+P G
Sbjct: 240 GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-G- 297
Query: 235 SKCMIASCSQDRKVIIW 251
SK IA+ S DR V +W
Sbjct: 298 SK--IAAGSADRFVYVW 312
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 81/301 (26%), Positives = 126/301 (41%)
Query: 11 GHEDMIHDA---EMDYLGLYLATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKGH 65
GH D++ D + D L L + S D T+ ++ N++RN K H +GH
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERN-KVKALHC--------CRGH 188
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK-- 123
+G V +A GT S S+D+ + IW + E + + S N K
Sbjct: 189 AGSVDSIAV--DSTGTRFCSGSWDKMLKIW-----STVPTDEEDEMEESTNRPRKKQKTE 241
Query: 124 EFGL----ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
+ GL I+ IS + + SD S HTIG W GSL L
Sbjct: 242 QLGLTRTPIVTLSGHKEAISSVLW-SDAEEICSASWD-HTIGV----WDVESGSLKST-L 294
Query: 180 KGSKL------GGVAKRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSW 232
G+K+ + KRL SG D I++W + D + L +H+ WV V W+P+
Sbjct: 295 TGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT- 353
Query: 233 GLSKCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNS 291
+ + S S D V +W + P + + +D V +V W+ TG +L+ DN
Sbjct: 354 --HEQQLISGSLDNIVKLWDTRSCKA--PLYDLAAHEDKVLSVDWTNTGLLLSGGA-DNK 408
Query: 292 V 292
+
Sbjct: 409 L 409
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 115 (45.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE ++ + G LA+ D + ++N+ + D++ A LKGHSG V
Sbjct: 90 SGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDC---DNY-------ATLKGHSGAV 139
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++ + G++L S S D+ V +W + G K H S VNS P G L
Sbjct: 140 MELHYNTD--GSMLFSASTDKTVAVWDSETGERVK--RLKGHTSFVNSCY--PARRGPQL 193
Query: 130 AC-GSSDGTISFLTYMSDTNSWESRKIAA 157
C GS DGT+ W+ RK AA
Sbjct: 194 VCTGSDDGTVKL---------WDIRKKAA 213
Score = 75 (31.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+++SGG DN IK+W +K + T + H+D V ++ + S G + S + D V
Sbjct: 234 QIISGGIDNDIKVWDLRQNK-LTYT-MRGHADSVTGLSLS-SEG---SYLLSNAMDNTVR 287
Query: 250 IWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
IW + + ++ F+ + SWS G + D V +W
Sbjct: 288 IWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVW 339
Score = 56 (24.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWK------QEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
G L L+S DN ++IW +E I + + N + +W+P G
Sbjct: 267 GLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-G- 324
Query: 235 SKCMIASCSQDRKVIIW 251
SK IA S DR V +W
Sbjct: 325 SK--IAGGSADRFVYVW 339
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 126 (49.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C +D T++VF ++ G + E+K H
Sbjct: 609 LVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFK-----------AETGEKLLEIKAHE 657
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V A++ +A+CS D+KV IW G + Y+ H VN +
Sbjct: 658 DEVLCCAFSTDD--RFIATCSVDKKVKIWNSMTGELV--HTYDEHSEQVNCCHFTNSSHH 713
Query: 127 LILACGSSD 135
L+LA GSSD
Sbjct: 714 LLLATGSSD 722
Score = 75 (31.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 33/121 (27%), Positives = 53/121 (43%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L +G D +K+W K T H++ V ++P K ++ASCS D + +
Sbjct: 716 LATGSSDCFLKLWDLN-QKECRNTMF-GHTNSVNHCRFSPD---DK-LLASCSADGTLKL 769
Query: 251 W---TSNDY--VTWTPFIMNTFDD------VVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
W ++N+ + F +N D +V SWS G + V+ N + LW NT
Sbjct: 770 WDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAA-KNKIFLW--NT 826
Query: 300 D 300
D
Sbjct: 827 D 827
Score = 52 (23.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K L+S D I++W + DK I L H + V+D L + S S D V
Sbjct: 973 KTLISSSDDAEIQVWNWQLDKCIF---LRGHQETVKDFRL-----LKNSRLLSWSFDGTV 1024
Query: 249 IIW 251
+W
Sbjct: 1025 KVW 1027
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 188 AKRLVSGGCDNLIKIWK-QEGDKW-----IEETKLENHSDWVRDVAWAP 230
A + S D KIW G+ + E H WV D+ ++P
Sbjct: 1054 ATKFSSTSADKTAKIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSP 1102
Score = 40 (19.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 271 VWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306
VW++ ++ L S D + +W D +CI
Sbjct: 963 VWHIQFTADEKTLISSSDDAEIQVWNWQLD---KCI 995
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 105 (42.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
KR+VSG DN + +W+ K ++ KLE H++ V +VA P+ L IAS S D+ V
Sbjct: 256 KRIVSGSEDNCVHMWELNSKKLLQ--KLEGHTETVMNVACHPTENL----IASGSLDKTV 309
Query: 249 IIWT 252
IWT
Sbjct: 310 RIWT 313
Score = 82 (33.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGHE+ I D ++ + S D T+K+++++ G+LI L GH+
Sbjct: 68 TGHENGISDVAFSSDARFIVSASDDKTLKLWDVET-----------GSLIKTLIGHTNYA 116
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFK 104
+ V + +PQ ++ S S+D V IW G K
Sbjct: 117 FCVNF-NPQ-SNMIVSGSFDETVRIWDVTTGKCLK 149
Score = 73 (30.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV 115
G + L HS PV V + G+L+ S SYD IW G+ K ++ + V
Sbjct: 145 GKCLKVLPAHSDPVTAVDFNRD--GSLIVSSSYDGLCRIWDSGTGHCVKTL-IDDENPPV 201
Query: 116 NSIAWAPKEFGLILACGSSDGTI 138
+ + ++P G + G+ D T+
Sbjct: 202 SFVRFSPN--GKFILVGTLDNTL 222
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 124 (48.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
+RLV+ D +K+W E K++ L H++WVR ++P L IASC DR V
Sbjct: 115 QRLVTASDDKSVKVWGVERKKFLYS--LNRHTNWVRCARFSPDGRL----IASCGDDRTV 168
Query: 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
+W ++ + I + V ++ +G + S DN++ +W T+
Sbjct: 169 RLWDTSSHQCIN--IFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTN 218
Score = 66 (28.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+D+I A+ + LAT S D ++ ++NL + K GH+ +
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNL----------APKARAF-RFVGHTDVIT 64
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIW 95
V +A P G+L+AS S D+ V +W
Sbjct: 65 GVNFA-PS-GSLVASSSRDQTVRLW 87
>DICTYBASE|DDB_G0269388 [details] [associations]
symbol:corB "coronin 7" species:44689 "Dictyostelium
discoideum" [GO:0051015 "actin filament binding" evidence=IEA;IDA]
[GO:0031589 "cell-substrate adhesion" evidence=IMP] [GO:0031276
"negative regulation of lateral pseudopodium assembly"
evidence=IMP] [GO:0031252 "cell leading edge" evidence=IDA]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0030864 "cortical actin cytoskeleton"
evidence=IDA] [GO:0030835 "negative regulation of actin filament
depolymerization" evidence=IDA] [GO:0009617 "response to bacterium"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IEA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0001667 "ameboidal cell migration" evidence=IMP]
[GO:0045335 "phagocytic vesicle" evidence=IBA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269388 GO:GO:0005829 GO:GO:0031252
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0009617 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030866 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006909 GO:GO:0051015 GO:GO:0042995
GO:GO:0001891 GO:GO:0030864 GO:GO:0031589 GO:GO:0001667
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
HSSP:O89053 OMA:EVEFARC RefSeq:XP_645927.1
ProteinModelPortal:Q55E54 EnsemblProtists:DDB0232260 GeneID:8616868
KEGG:ddi:DDB_G0269388 ProtClustDB:CLSZ2730920 GO:GO:0031276
Uniprot:Q55E54
Length = 962
Score = 136 (52.9 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 12 HEDMIHDAEMDYLGLY-LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
H + D E + + L T S D T+KV+N+D ++ + +++ GHS V
Sbjct: 75 HSSGVIDFEFNPFNEHQLVTASDDSTIKVWNIDEAIRSGATSLSSASIVCS--GHSKSVE 132
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
+A+ +P +LASCS D+ + IW NG + Y +N S+ S++W + L++A
Sbjct: 133 CIAF-NPVANNILASCSADKTLKIWDLSNGE--EKYSWNFEQGSLTSLSWN-YDGSLLVA 188
Query: 131 CG 132
G
Sbjct: 189 TG 190
Score = 55 (24.4 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 191 LVSGGCDNLIKIWK-QEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
L++ G D ++K+W EG E+ N H+D + V +W K I + S+D+K+
Sbjct: 632 LITSGGDMVVKLWDLNEGGAG-EKLSFANVHTDMITSVD--VNWTGDK--ILTSSKDKKM 686
Query: 249 IIW 251
I+
Sbjct: 687 RIF 689
Score = 52 (23.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTDGA 302
SN+Y T + V+ +V++ T + +L S GD V LW N GA
Sbjct: 602 SNNYTTTEADFVGHNRKVI-SVNFHPTAENVLITSGGDMVVKLWDLNEGGA 651
Score = 48 (22.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 22/102 (21%), Positives = 43/102 (42%)
Query: 213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IMNTFDDVV 271
E H+ V V + P+ ++ ++ + D V +W N+ N D++
Sbjct: 609 EADFVGHNRKVISVNFHPT---AENVLITSGGDMVVKLWDLNEGGAGEKLSFANVHTDMI 665
Query: 272 WNVSWSLTGDILTVSCGDNSVSLW--KENTDG-AWQCITEMG 310
+V + TGD + S D + ++ + N G A + +T G
Sbjct: 666 TSVDVNWTGDKILTSSKDKKMRIFDPRTNKGGLASETVTHSG 707
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 243 SQDRKVIIWTSNDYVTWTPFIMNTFDD---VVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
S +R+ +W S + + TP + D V+ +G I GD+S+ +++ N
Sbjct: 730 SSEREYQLWDSRNLQSGTPLASDKLDHLSGVITPFYDEDSGVIYLAGKGDSSIRMFEIN 788
>UNIPROTKB|F1NMC6 [details] [associations]
symbol:ELP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0046425 "regulation of JAK-STAT
cascade" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046425 GeneTree:ENSGT00390000000916 OMA:DCLIRIW
EMBL:AADN02008271 IPI:IPI00593505 ProteinModelPortal:F1NMC6
Ensembl:ENSGALT00000021568 Uniprot:F1NMC6
Length = 822
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 55/201 (27%), Positives = 87/201 (43%)
Query: 59 IAELKGHSGPVWQVAWAHPQFG---TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV 115
+A L+GH G V V W + G T L S + D+K+I+W + K H +V
Sbjct: 50 VAALRGHGGRVSCVRWIRRRDGATETELVSGASDKKLILWEWNRNQLVKSVPLEGHTEAV 109
Query: 116 ---NSIAWAPK-EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI 171
++I + + + L++A +SD T+ W I + +G G
Sbjct: 110 CAVDAIYQSDEPDLNLLIASAASDSTVRI---------WSRHDSEVKCI--EVLQFGNGF 158
Query: 172 GSLSELDLKGSKL-GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP 230
+D+ S L G L GG D I ++ Q+ ++ + L H DW+R V WA
Sbjct: 159 ----VMDVSLSFLPGSNVPILACGGDDCKINLFIQQNGQFQKTLTLPGHEDWIRGVEWAI 214
Query: 231 SWGLSKCMIASCSQDRKVIIW 251
G +ASC+QD + IW
Sbjct: 215 C-G-DDLFLASCAQDCLIRIW 233
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 44/147 (29%), Positives = 69/147 (46%)
Query: 176 ELDLKGSK--LGGVA-----KRLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA S G D I+IW G+ W +T L + H +R+V
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P +AS S D IW+ ++ T T + ++ V +VSWS +G +L
Sbjct: 67 WSPCGEY----LASASFDATTAIWSKHE-CTAT---LEGHENEVKSVSWSRSGGLLATCS 118
Query: 288 GDNSVSLWKENTDGAWQCITEMGKTSE 314
D SV +W+ D ++C + S+
Sbjct: 119 RDKSVWIWEVAGDDEFECAAVLNAHSQ 145
Score = 142 (55.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 46/156 (29%), Positives = 69/156 (44%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH+ I + G YLA+ S D T +++ K A L+GH
Sbjct: 53 ILSDGHKRTIREVRWSPCGEYLASASFDATTAIWS-------------KHECTATLEGHE 99
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAP-KE 124
V V+W+ G LLA+CS D+ V IW + F+ N H V + W P KE
Sbjct: 100 NEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE 157
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHT 159
ILA S D TI + + W+ + +++HT
Sbjct: 158 ---ILASASYDNTIKMYAESALDSDWDCTATLSSHT 190
Score = 142 (55.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 67/279 (24%), Positives = 120/279 (43%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + +V W+ P G LAS S+D IW H++ V
Sbjct: 52 TILSD--GHKRTIREVRWS-P-CGEYLASASFDATTAIWSKHECT----ATLEGHENEVK 103
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + AH+ V W P
Sbjct: 104 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNAHSQDVKRVVWHP----TK 156
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWG 233
E+ L S DN IK++ + W L +H+ V W+ +
Sbjct: 157 EI-------------LASASYDNTIKMYAESALDSDWDCTATLSSHTSTV----WSIDFD 199
Query: 234 LSKCMIASCSQDRKVIIWTS----NDYVTWTPFIMNTFDDV----------VWNVSW-SL 278
+ SCS D + IW + N+ TP + V +++VSW L
Sbjct: 200 ADGERLVSCSDDATLKIWRAYHPGNEAGIATPDKTTVWKCVCTLSGLHTRAIYDVSWCKL 259
Query: 279 TGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRA 317
TG ++ +CGD+++ ++KE++D + TSE+ A
Sbjct: 260 TG-LIASACGDDAIRIFKESSDSKRDAPSFELLTSEESA 297
Score = 138 (53.6 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 40/123 (32%), Positives = 55/123 (44%)
Query: 56 GTLIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHD 112
G LI E L+GH G +W VAW HP+ G ASC D+ + IW W K + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHK 59
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG 172
++ + W+P G LA S D T + + T + E H +VSW G
Sbjct: 60 RTIREVRWSP--CGEYLASASFDATTAIWSKHECTATLEG-----HENEVKSVSWSRSGG 112
Query: 173 SLS 175
L+
Sbjct: 113 LLA 115
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 66/251 (26%), Positives = 102/251 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V ++ + DD A L HS V
Sbjct: 97 GHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLNAHSQDVK 148
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWAPKEFGLI 128
+V W HP +LAS SYD + ++ + +W ++H S+V SI + L+
Sbjct: 149 RVVW-HPT-KEILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFDADGERLV 206
Query: 129 LACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVA 188
+C S D T+ N T+ V G+ + + D+ KL G
Sbjct: 207 -SC-SDDATLKIWRAYHPGNEAGIATPDKTTVW-KCVCTLSGLHTRAIYDVSWCKLTG-- 261
Query: 189 KRLVSGGC-DNLIKIWKQEGDKWIEETKLE-------NHSDWVRDVAWAPSWGLSKCMIA 240
L++ C D+ I+I+K+ D + E H V V W P ++ +
Sbjct: 262 --LIASACGDDAIRIFKESSDSKRDAPSFELLTSEESAHEQDVNAVEWNP---VNVGQLI 316
Query: 241 SCSQDRKVIIW 251
SCS D + IW
Sbjct: 317 SCSDDGTIKIW 327
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 44/147 (29%), Positives = 69/147 (46%)
Query: 176 ELDLKGSK--LGGVA-----KRLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVA 227
E L+G K + GVA S G D I+IW G+ W +T L + H +R+V
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVR 66
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC 287
W+P +AS S D IW+ ++ T T + ++ V +VSWS +G +L
Sbjct: 67 WSPCGEY----LASASFDATTAIWSKHE-CTAT---LEGHENEVKSVSWSRSGGLLATCS 118
Query: 288 GDNSVSLWKENTDGAWQCITEMGKTSE 314
D SV +W+ D ++C + S+
Sbjct: 119 RDKSVWIWEVAGDDEFECAAVLNAHSQ 145
Score = 142 (55.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 45/156 (28%), Positives = 69/156 (44%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
++ GH+ I + G YLA+ S D T +++ K A L+GH
Sbjct: 53 ILSDGHKRTIREVRWSPCGEYLASASFDATTAIWS-------------KHECTATLEGHE 99
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAP-KE 124
V V+W+ G LLA+CS D+ V IW + F+ N H V + W P KE
Sbjct: 100 NEVKSVSWSRS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE 157
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHT 159
+LA S D TI + + W+ + +++HT
Sbjct: 158 ---VLASASYDNTIKMFAESALDSDWDCTATLSSHT 190
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 64/278 (23%), Positives = 114/278 (41%)
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T++++ GH + +V W+ P G LAS S+D IW H++ V
Sbjct: 52 TILSD--GHKRTIREVRWS-P-CGEYLASASFDATTAIWSKHECT----ATLEGHENEVK 103
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLS 175
S++W+ + GL+ C S D ++ ++ ++ + +E + AH+ V W P
Sbjct: 104 SVSWS-RSGGLLATC-SRDKSV-WIWEVAGDDEFECAAVLNAHSQDVKRVVWHP----TK 156
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWG 233
E+ L S DN IK++ + W L +H+ V W+ +
Sbjct: 157 EV-------------LASASYDNTIKMFAESALDSDWDCTATLSSHTSTV----WSIDFD 199
Query: 234 LSKCMIASCSQDRKVIIWTS----NDYVTWTP----------FIMNTFDDVVWNVSWSLT 279
+ SCS D + IW + ND TP + +++VSW
Sbjct: 200 ADGERLVSCSDDATLKIWRAYHPGNDAGIATPDKTTVWKCVCTLSGEHSRAIYDVSWCKQ 259
Query: 280 GDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRA 317
++ +CGD+ + ++KE +D T T+E+ A
Sbjct: 260 TGLIASACGDDGIRIFKECSDSKRDAPTFELLTAEESA 297
Score = 133 (51.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 39/121 (32%), Positives = 54/121 (44%)
Query: 58 LIAE--LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHDSS 114
LI E L+GH G +W VAW HP+ G ASC D+ + IW W K + H +
Sbjct: 4 LILEHTLQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRT 61
Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL 174
+ + W+P G LA S D T + + T + E H +VSW G L
Sbjct: 62 IREVRWSP--CGEYLASASFDATTAIWSKHECTATLEG-----HENEVKSVSWSRSGGLL 114
Query: 175 S 175
+
Sbjct: 115 A 115
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 66/251 (26%), Positives = 100/251 (39%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + G LATCS D +V ++ + DD A L HS V
Sbjct: 97 GHENEVKSVSWSRSGGLLATCSRDKSVWIWEV----AGDDEFE----CAAVLNAHSQDVK 148
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWAPKEFGLI 128
+V W HP +LAS SYD + ++ + +W ++H S+V SI + L+
Sbjct: 149 RVVW-HPT-KEVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERLV 206
Query: 129 LACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVA 188
+C S D T+ N T+ V G S + D+ K G
Sbjct: 207 -SC-SDDATLKIWRAYHPGNDAGIATPDKTTVW-KCVCTLSGEHSRAIYDVSWCKQTG-- 261
Query: 189 KRLVSGGC-DNLIKIWKQEGDKWIEETKLE-------NHSDWVRDVAWAPSWGLSKCMIA 240
L++ C D+ I+I+K+ D + E H V V W P ++ +
Sbjct: 262 --LIASACGDDGIRIFKECSDSKRDAPTFELLTAEESAHEQDVNAVEWNP---VTAGQLI 316
Query: 241 SCSQDRKVIIW 251
SCS D + IW
Sbjct: 317 SCSDDGTIKIW 327
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 100 (40.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 50/170 (29%), Positives = 78/170 (45%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH D++ + G++LAT + D+TV+++NL N++ D+ + I GH+ V
Sbjct: 362 GHTDIVLTLDSSEDGVWLATGAKDNTVRLWNL--NIE-DNVYK----CIHVFTGHTASVT 414
Query: 71 QVAWAHPQ---FGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN--------HDSSVNSIA 119
VA + T LAS S DR + R + G+ +++N HD VN+I
Sbjct: 415 AVALGPLDVNGYPTFLASSSQDRT--LKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQ 472
Query: 120 WAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169
K+ G I+A S D TI + S T + H G A S+ P
Sbjct: 473 -VSKD-GRIIASASQDKTIKL--WDSSTGEVVG-VLRGHRRGVWACSFNP 517
Score = 95 (38.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 32/130 (24%), Positives = 62/130 (47%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
+++L SG D I+IW + + ++ LE H+ + + + S G + S + D
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQT--LEGHTGAILKLIYI-SQGTQ---VVSAAADGL 572
Query: 248 VIIWT-SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306
V +W+ S+ T ++ +D VW ++ G +L D VS+WK+ T+ + I
Sbjct: 573 VKVWSLSSGECVAT---LDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTE---EYI 626
Query: 307 TEMGKTSEQR 316
+ + E+R
Sbjct: 627 AKQAEELERR 636
Score = 73 (30.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
HE + +D LAT ++ VKV+++ +HS +GH G +
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYV---THS--------FRGHGGVISA 150
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC 131
+ + Q +LAS + D +V +W ++ +E H S + + + P G L
Sbjct: 151 LCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFE--GHSSVIRGLTFEPT--GSFLLS 206
Query: 132 GSSDGTI 138
GS D T+
Sbjct: 207 GSRDKTV 213
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 39/128 (30%), Positives = 67/128 (52%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD--SHSQKGTLIAELK-GHSG 67
GH + ++ + D G+ LA+CS D T+K++++ ++ D +HS++ I +K +G
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE---IYTIKWSPTG 413
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
P A ++P +LAS S+D V +W + G + H V S+A++P G
Sbjct: 414 P----ATSNPNSSIMLASASFDSTVRLWDVEQG--VCTHTLMKHQEPVYSVAFSPD--GK 465
Query: 128 ILACGSSD 135
LA GS D
Sbjct: 466 YLASGSFD 473
Score = 98 (39.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 43/162 (26%), Positives = 67/162 (41%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL+ N + I E GH P
Sbjct: 177 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GGHDVPSN 235
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA SYD IW +NGN H + ++ W K+
Sbjct: 236 KDVTSLDWNSD--GTLLAMGSYDGFARIWT-ENGNLAS--TLGQHKGPIFALKWN-KKGN 289
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
+L+ G TI + D ++ E+++ H+ V W
Sbjct: 290 YVLSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 326
Score = 93 (37.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 31/110 (28%), Positives = 49/110 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-----SKCMIASCSQD 245
L S D +KIW + D + + L+ HS + + W+P+ S M+AS S D
Sbjct: 374 LASCSDDMTLKIWSMKQDACVHD--LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFD 431
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W V T +M + V++V++S G L D V +W
Sbjct: 432 STVRLWDVEQGVC-THTLMK-HQEPVYSVAFSPDGKYLASGSFDKYVHIW 479
Score = 76 (31.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 28/104 (26%), Positives = 49/104 (47%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W E + + L H + V VA++P K +AS S D+ V I
Sbjct: 425 LASASFDSTVRLWDVE--QGVCTHTLMKHQEPVYSVAFSPD---GK-YLASGSFDKYVHI 478
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T + +++++ ++ V W+ GD + S D SV
Sbjct: 479 WN-----TQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSV 517
Score = 72 (30.4 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 23/88 (26%), Positives = 39/88 (44%)
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW 276
+ H++ V + W PS G+ ++ASCS D + IW+ + ++ + W
Sbjct: 356 QGHTNEVNAIKWDPS-GM---LLASCSDDMTLKIWSMKQDACVHD--LQAHSKEIYTIKW 409
Query: 277 SLTG--------DILTVSCG-DNSVSLW 295
S TG I+ S D++V LW
Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLW 437
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 142 (55.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 53/183 (28%), Positives = 81/183 (44%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C +D T++VF ++ G + ++K H
Sbjct: 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFK-----------AETGEKLLDIKAHE 657
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V A++ + +A+CS D+KV IW D+G + Y H VN + K
Sbjct: 658 DEVLCCAFSSDD--SYIATCSVDKKVKIW--DSGTGKLVHTYEEHSEQVNCCHFTNKSNH 713
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGS-KL 184
L+LA GS+D SFL + D N E R + HT + P L+ G+ KL
Sbjct: 714 LLLATGSND---SFLK-LWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKL 769
Query: 185 GGV 187
V
Sbjct: 770 WDV 772
Score = 53 (23.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K L+S D++I++W + ++++ L+ H + V+D L + S S D V
Sbjct: 1016 KTLISSSEDSVIQVWNWQTEEYVF---LQAHQETVKDFRL-----LRDSRLLSWSFDGTV 1067
Query: 249 IIW 251
+W
Sbjct: 1068 KVW 1070
Score = 53 (23.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 15/73 (20%), Positives = 31/73 (42%)
Query: 200 IKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW 259
+++W D ++ H WV V ++P G S + S D+ + +W +
Sbjct: 864 VELWNI--DSRVKVADCRGHLSWVHGVMFSPD-GSS---FLTASDDQTIRVWETRKVCKN 917
Query: 260 TPFIMNTFDDVVW 272
+ ++ DVV+
Sbjct: 918 SAIVLKQEIDVVF 930
Score = 52 (23.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
A + S D KIW E + E L+ H+ VR A++ L ++A+ + +
Sbjct: 1097 ATKFSSTSADKTAKIWSFELPSPLHE--LKGHNSCVRCSAFS----LDGILLATGDDNGE 1150
Query: 248 VIIWTSND 255
+ IW +D
Sbjct: 1151 IRIWNVSD 1158
Score = 44 (20.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 191 LVSGGCDN-LIKIWKQEGDKWIE-------ETKLENHSDWVRDVAWAP 230
L++ G DN I+IW + + E H WV DV ++P
Sbjct: 1141 LLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSP 1188
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 95 (38.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 26/115 (22%), Positives = 49/115 (42%)
Query: 188 AKRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 246
A ++ +GG DN +K+W ++G+ + LE H D + ++ +P + + D
Sbjct: 192 ADKIFTGGVDNDVKVWDLRKGEATMT---LEGHQDTITGMSLSPDGSY----LLTNGMDN 244
Query: 247 KVIIWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
K+ +W Y + + F+ + SWS G +T D V +W
Sbjct: 245 KLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIW 299
Score = 90 (36.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L GH V+ + + +P GTL+AS S+DR++ +WR +G+ + H +++ + W
Sbjct: 49 LSGHPSAVYTMKF-NPA-GTLIASGSHDREIFLWRV-HGDCKNFMVLKGHKNAILDLHWT 105
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA 164
G + S D T+ + +T + +K+A H+ N+
Sbjct: 106 SD--GSQIVSASPDKTVR--AWDVETGK-QIKKMAEHSSFVNS 143
Score = 88 (36.0 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 32/128 (25%), Positives = 54/128 (42%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GH ++ + + G +A+ S D + ++ + + K LKGH +
Sbjct: 50 SGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKN----------FMVLKGHKNAI 99
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
+ W G+ + S S D+ V W + G K + H S VNS + LI+
Sbjct: 100 LDLHWTSD--GSQIVSASPDKTVRAWDVETGKQIK--KMAEHSSFVNSCCPTRRGPPLII 155
Query: 130 ACGSSDGT 137
+ GS DGT
Sbjct: 156 S-GSDDGT 162
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 141 (54.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 62/255 (24%), Positives = 111/255 (43%)
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK- 123
H+ V VA+++ G L S S+D V++++ ++G + + + H+S V ++
Sbjct: 66 HTRAVRSVAFSND--GKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSD 123
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
EF LA S D ++ F D + S + HT V+W P +E DL
Sbjct: 124 EF---LATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHP-----TE-DL---- 170
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIAS- 241
LVS D+ I+ ++ +G+ W+ + K++ H V +A+ G +
Sbjct: 171 -------LVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWSIAFDTE-GHRLVTVGED 222
Query: 242 -CSQ--DRKVIIWTSNDYVTWTPFIMNTFDDVVW---NVSWSLTGDILTVSCGDNSVSLW 295
C Q R+ I S D TW ++ W +V+W+ T D++ GD + L+
Sbjct: 223 HCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNSTNDVIATGGGDCKIRLF 282
Query: 296 KENTDGAWQCITEMG 310
K ++ I +G
Sbjct: 283 KISSTPESPVIEHLG 297
Score = 131 (51.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 70/260 (26%), Positives = 109/260 (41%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
+++N ++ GHE + A +LATCS D +V + D +D+ S L
Sbjct: 102 AEVNKLE-GHESEVKCAVFSKSDEFLATCSRDKSVWFWQQD----EDEDFSVSSIL---- 152
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN-HDSSVNSIAWA 121
+ H+ V QVAW HP LL SCSYD + +R D +W + + H +V SIA+
Sbjct: 153 QPHTQDVKQVAW-HPT-EDLLVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWSIAFD 210
Query: 122 PKEFGLILACGSSDGTISFL------TYMSDTNSWESRKIAAHTIGCNAVSWGP--GIGS 173
+ L+ D I + +D ++W+S +A + + W P +
Sbjct: 211 TEGHRLVTV--GEDHCIQLFVRENIGSKSADQDTWKS--VARYDV--ENTRW-PLYSVAW 263
Query: 174 LSELDLKGSKLGGVAKRLVSGGCD-NLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPS 231
S D+ + GG G C L KI IE + H V VAW P+
Sbjct: 264 NSTNDVIAT--GG-------GDCKIRLFKISSTPESPVIEHLGVVGRHELDVNHVAWNPN 314
Query: 232 WGLSKCMIASCSQDRKVIIW 251
S ++ S S D + +W
Sbjct: 315 PKFSN-LLTSASDDGTIRLW 333
Score = 130 (50.8 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 68/303 (22%), Positives = 132/303 (43%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
+D H + G L + S D +V V+ ++D ++ + +L+GH
Sbjct: 62 LDDSHTRAVRSVAFSNDGKCLVSASFDASVVVYQ-----QEDGEFAE----VNKLEGHES 112
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEFG 126
V ++ LA+CS D+ V W+ D F H V +AW P E
Sbjct: 113 EVKCAVFSKSD--EFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTE-D 169
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGG 186
L+++C S D +I F Y D W +++ GC+ + + S++ D +G
Sbjct: 170 LLVSC-SYDSSIRF--YRFDGEDWVTQQ---KIDGCHVGT----VWSIA-FDTEGH---- 214
Query: 187 VAKRLVSGGCDNLIKIWKQE--GDKWIEETKLENHSDW-VRDVAW---APSWGLSKCMIA 240
RLV+ G D+ I+++ +E G K ++ ++ + + V + W + +W + +IA
Sbjct: 215 ---RLVTVGEDHCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNSTNDVIA 271
Query: 241 SCSQDRKVIIW----TSNDYVTWTPFIMNTFDDVVWNVSWSLT---GDILTVSCGDNSVS 293
+ D K+ ++ T V ++ + V +V+W+ ++LT + D ++
Sbjct: 272 TGGGDCKIRLFKISSTPESPVIEHLGVVGRHELDVNHVAWNPNPKFSNLLTSASDDGTIR 331
Query: 294 LWK 296
LW+
Sbjct: 332 LWE 334
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00092
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D V+V++L + + DS + H+ V VA+++ G L
Sbjct: 29 GRILASCGDDKAVRVWSL---VGEPDSKMRLECRTTLDDSHTRAVRSVAFSND--GKCLV 83
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK-EFGLILACGSSDGTISFLTY 143
S S+D V++++ ++G + + + H+S V ++ EF LA S D ++ F
Sbjct: 84 SASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEF---LATCSRDKSVWFWQQ 140
Query: 144 MSDTNSWESRKIAAHTIGCNAVSWGP 169
D + S + HT V+W P
Sbjct: 141 DEDEDFSVSSILQPHTQDVKQVAWHP 166
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 141 (54.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 62/255 (24%), Positives = 111/255 (43%)
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK- 123
H+ V VA+++ G L S S+D V++++ ++G + + + H+S V ++
Sbjct: 66 HTRAVRSVAFSND--GKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSD 123
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
EF LA S D ++ F D + S + HT V+W P +E DL
Sbjct: 124 EF---LATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHP-----TE-DL---- 170
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIAS- 241
LVS D+ I+ ++ +G+ W+ + K++ H V +A+ G +
Sbjct: 171 -------LVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWSIAFDTE-GHRLVTVGED 222
Query: 242 -CSQ--DRKVIIWTSNDYVTWTPFIMNTFDDVVW---NVSWSLTGDILTVSCGDNSVSLW 295
C Q R+ I S D TW ++ W +V+W+ T D++ GD + L+
Sbjct: 223 HCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNSTNDVIATGGGDCKIRLF 282
Query: 296 KENTDGAWQCITEMG 310
K ++ I +G
Sbjct: 283 KISSTPESPVIEHLG 297
Score = 131 (51.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 70/260 (26%), Positives = 109/260 (41%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
+++N ++ GHE + A +LATCS D +V + D +D+ S L
Sbjct: 102 AEVNKLE-GHESEVKCAVFSKSDEFLATCSRDKSVWFWQQD----EDEDFSVSSIL---- 152
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN-HDSSVNSIAWA 121
+ H+ V QVAW HP LL SCSYD + +R D +W + + H +V SIA+
Sbjct: 153 QPHTQDVKQVAW-HPT-EDLLVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWSIAFD 210
Query: 122 PKEFGLILACGSSDGTISFL------TYMSDTNSWESRKIAAHTIGCNAVSWGP--GIGS 173
+ L+ D I + +D ++W+S +A + + W P +
Sbjct: 211 TEGHRLVTV--GEDHCIQLFVRENIGSKSADQDTWKS--VARYDV--ENTRW-PLYSVAW 263
Query: 174 LSELDLKGSKLGGVAKRLVSGGCD-NLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPS 231
S D+ + GG G C L KI IE + H V VAW P+
Sbjct: 264 NSTNDVIAT--GG-------GDCKIRLFKISSTPESPVIEHLGVVGRHELDVNHVAWNPN 314
Query: 232 WGLSKCMIASCSQDRKVIIW 251
S ++ S S D + +W
Sbjct: 315 PKFSN-LLTSASDDGTIRLW 333
Score = 130 (50.8 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 68/303 (22%), Positives = 132/303 (43%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
+D H + G L + S D +V V+ ++D ++ + +L+GH
Sbjct: 62 LDDSHTRAVRSVAFSNDGKCLVSASFDASVVVYQ-----QEDGEFAE----VNKLEGHES 112
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEFG 126
V ++ LA+CS D+ V W+ D F H V +AW P E
Sbjct: 113 EVKCAVFSKSD--EFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTE-D 169
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGG 186
L+++C S D +I F Y D W +++ GC+ + + S++ D +G
Sbjct: 170 LLVSC-SYDSSIRF--YRFDGEDWVTQQ---KIDGCHVGT----VWSIA-FDTEGH---- 214
Query: 187 VAKRLVSGGCDNLIKIWKQE--GDKWIEETKLENHSDW-VRDVAW---APSWGLSKCMIA 240
RLV+ G D+ I+++ +E G K ++ ++ + + V + W + +W + +IA
Sbjct: 215 ---RLVTVGEDHCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNSTNDVIA 271
Query: 241 SCSQDRKVIIW----TSNDYVTWTPFIMNTFDDVVWNVSWSLT---GDILTVSCGDNSVS 293
+ D K+ ++ T V ++ + V +V+W+ ++LT + D ++
Sbjct: 272 TGGGDCKIRLFKISSTPESPVIEHLGVVGRHELDVNHVAWNPNPKFSNLLTSASDDGTIR 331
Query: 294 LWK 296
LW+
Sbjct: 332 LWE 334
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00092
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LA+C D V+V++L + + DS + H+ V VA+++ G L
Sbjct: 29 GRILASCGDDKAVRVWSL---VGEPDSKMRLECRTTLDDSHTRAVRSVAFSND--GKCLV 83
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK-EFGLILACGSSDGTISFLTY 143
S S+D V++++ ++G + + + H+S V ++ EF LA S D ++ F
Sbjct: 84 SASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEF---LATCSRDKSVWFWQQ 140
Query: 144 MSDTNSWESRKIAAHTIGCNAVSWGP 169
D + S + HT V+W P
Sbjct: 141 DEDEDFSVSSILQPHTQDVKQVAWHP 166
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 97 (39.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 28/121 (23%), Positives = 49/121 (40%)
Query: 185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
G ++++SGG DN +KIW + L HSD + ++ +P I + +
Sbjct: 191 GDTGEQVISGGIDNEVKIWDIRKQAVLHH--LRGHSDTITGMSLSPEGDF----ILTNAM 244
Query: 245 DRKVIIWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
D + +W Y + + F+ + +WS D +T D V +W N
Sbjct: 245 DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVN 304
Query: 299 T 299
T
Sbjct: 305 T 305
Score = 87 (35.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118
I +L+GH G ++ + HP+ G LL S +DR++ IW+ + + H +V
Sbjct: 48 IMQLEGHEGEIFTAEF-HPE-GELLLSSGFDRQIYIWQVYE-DCENVMAMSGHSGAVMEA 104
Query: 119 AWAPKEFGLILACGSSDGTISF 140
+ P + I C S+D T++F
Sbjct: 105 HFTP-DGSHIFTC-STDKTLAF 124
Score = 56 (24.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GH + +A G ++ TCS+D T+ +++ ++ KGH V
Sbjct: 95 SGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQ-----------RRFKGHGNFV 143
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIW 95
V + + LL S S DR + IW
Sbjct: 144 NSVQGSR-RGQQLLCSGSDDRTIKIW 168
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 57/227 (25%), Positives = 90/227 (39%)
Query: 6 NLVDT-G-HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
NL T G H+ I + + G Y+ + D T ++ D+H+ G +
Sbjct: 263 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIW---------DAHT--GEAKQQFP 311
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
HS P V W Q T ASCS D + + R K ++ H + VN+I W P
Sbjct: 312 FHSAPALDVDW---QNNTTFASCSTDMCIHVCRLGCDRPVKTFQ--GHTNEVNAIKWDPS 366
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
G++LA S D T+ + D + AH + W P + S S
Sbjct: 367 --GMLLASCSDDMTLKIWSMKQDACV---HNLQAHRKEIYTIKWSPTGPTTSN---PNSS 418
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP 230
+ L S D+ +++W E + + L H + V VA++P
Sbjct: 419 I-----MLASASFDSTVRLWDME--QGVCTHTLRKHQEPVYSVAFSP 458
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G+ LA+CS D T+K++++ ++ + + + + +GP
Sbjct: 353 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTT 412
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
++P +LAS S+D V +W + G + H V S+A++P G LA
Sbjct: 413 ----SNPNSSIMLASASFDSTVRLWDMEQG--VCTHTLRKHQEPVYSVAFSPD--GKYLA 464
Query: 131 CGSSD 135
GS D
Sbjct: 465 SGSFD 469
Score = 102 (41.0 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 44/162 (27%), Positives = 69/162 (42%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL+ N + + I E GH P
Sbjct: 173 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIRE-GGHDVPSN 231
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW +NGN H + ++ W K+
Sbjct: 232 KDVTSLDWNSD--GTLLATGSYDGFARIWT-ENGNLAS--TLGQHKGPIFALKWN-KKGN 285
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 286 YILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 322
Score = 86 (35.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 30/111 (27%), Positives = 47/111 (42%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-----SKCMIASCSQD 245
L S D +KIW + D + L+ H + + W+P+ S M+AS S D
Sbjct: 370 LASCSDDMTLKIWSMKQDACVHN--LQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFD 427
Query: 246 RKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W V T T + + V++V++S G L D V +W
Sbjct: 428 STVRLWDMEQGVCTHT---LRKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 475
Score = 79 (32.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 28/104 (26%), Positives = 49/104 (47%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W E + + L H + V VA++P K +AS S D+ V I
Sbjct: 421 LASASFDSTVRLWDME--QGVCTHTLRKHQEPVYSVAFSPD---GK-YLASGSFDKCVHI 474
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T + +++++ ++ V W+ GD + S D SV
Sbjct: 475 WN-----TQSGSLVHSYQGTGGIFEVCWNAQGDKVGASASDGSV 513
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SNDYVTWTPFIMNTFDDVVWNVS 275
+ H++ V + W PS G+ ++ASCS D + IW+ D + ++ +
Sbjct: 352 QGHTNEVNAIKWDPS-GM---LLASCSDDMTLKIWSMKQDACVHN---LQAHRKEIYTIK 404
Query: 276 WSLTGDILTVSCGDNSVSLWKENTD 300
WS TG T S ++S+ L + D
Sbjct: 405 WSPTGP--TTSNPNSSIMLASASFD 427
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 107 (42.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 32/112 (28%), Positives = 51/112 (45%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH ++ A G ++ + S+D T+++++ N L+ KGH+ PVW
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLN----------ANLVC-YKGHNYPVW 464
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
++ P FG ASCS+DR IW D + H S V+ + W P
Sbjct: 465 DAQFS-P-FGHYFASCSHDRTARIWSMDRIQPLRIMA--GHLSDVDCVQWHP 512
Score = 83 (34.3 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 24/105 (22%), Positives = 48/105 (45%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ +G D +++W + + + H V +A +P + M AS +D +++
Sbjct: 517 IATGSSDKTVRLWDVQTGECVRI--FIGHRSMVLSLAMSPD---GRYM-ASGDEDGTIMM 570
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
W + TP + + + VW++S+S G +L D +V LW
Sbjct: 571 WDLSTARCITPLMGH--NSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 79 (32.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 32/109 (29%), Positives = 43/109 (39%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD-NGNWFKYYEYNNHDSSVNSIAW 120
L GHSGPV+ ++ P G + S S D + +W N N Y H+ V +
Sbjct: 414 LLGHSGPVYSATFSPP--GDFVLSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDAQF 468
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169
+P FG A S D T S R +A H + V W P
Sbjct: 469 SP--FGHYFASCSHDRTARI---WSMDRIQPLRIMAGHLSDVDCVQWHP 512
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 41/144 (28%), Positives = 69/144 (47%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G+ LA+CS D T+K++++ K+D T + +L+ HS ++
Sbjct: 356 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM----KQD-------TCVHDLQAHSKEIY 404
Query: 71 QVAWA-------HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
+ W+ +P +LAS S+D V +W D G + H V S+A++P
Sbjct: 405 TIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCI--HTLTKHQEPVYSVAFSPD 462
Query: 124 EFGLILACGSSDGTISFLTYMSDT 147
G LA GS D + S T
Sbjct: 463 --GKYLASGSFDKCVHIWNTQSGT 484
Score = 127 (49.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 59/228 (25%), Positives = 96/228 (42%)
Query: 6 NLVDT-G-HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
NL T G H+ I + + G Y+ + D T ++ D+H+ G +
Sbjct: 266 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIW---------DAHT--GEAKQQFP 314
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
HS P V W Q T ASCS D + + R K ++ H + VN+I W P
Sbjct: 315 FHSAPALDVDW---QNNTTFASCSTDMCIHVCRLGCDRPVKTFQ--GHTNEVNAIKWDPS 369
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP-GIGSLSELDLKGS 182
G++LA S D T+ + DT + + AH+ + W P G G+ + S
Sbjct: 370 --GMLLASCSDDMTLKIWSMKQDTCVHD---LQAHSKEIYTIKWSPTGPGTSNP----NS 420
Query: 183 KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP 230
+ L S D+ +++W + D+ + L H + V VA++P
Sbjct: 421 NI-----MLASASFDSTVRLW--DVDRGVCIHTLTKHQEPVYSVAFSP 461
Score = 99 (39.9 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 44/162 (27%), Positives = 67/162 (41%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL+ N + I E GH P
Sbjct: 176 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIRE-GGHDVPSN 234
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K+
Sbjct: 235 KDVTSLDWNSD--GTLLATGSYDGFARIWTED-GNLAS--TLGQHKGPIFALKWN-KKGN 288
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 289 YILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 325
Score = 89 (36.4 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 30/110 (27%), Positives = 49/110 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW-GLSK----CMIASCSQD 245
L S D +KIW + D + + L+ HS + + W+P+ G S M+AS S D
Sbjct: 373 LASCSDDMTLKIWSMKQDTCVHD--LQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFD 430
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W + V + + V++V++S G L D V +W
Sbjct: 431 STVRLWDVDRGVCI--HTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 478
Score = 76 (31.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W + D+ + L H + V VA++P K +AS S D+ V I
Sbjct: 424 LASASFDSTVRLW--DVDRGVCIHTLTKHQEPVYSVAFSPD---GK-YLASGSFDKCVHI 477
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T + +++++ ++ V W+ GD + S D SV
Sbjct: 478 WN-----TQSGTLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 516
Score = 74 (31.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 28/107 (26%), Positives = 47/107 (43%)
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW 276
+ H++ V + W PS G+ ++ASCS D + IW+ + ++ + W
Sbjct: 355 QGHTNEVNAIKWDPS-GM---LLASCSDDMTLKIWSMKQDTCVHD--LQAHSKEIYTIKW 408
Query: 277 SLTG--------DILTVSCG-DNSVSLWKENTDGAWQCITEMGKTSE 314
S TG +I+ S D++V LW + G CI + K E
Sbjct: 409 SPTGPGTSNPNSNIMLASASFDSTVRLWDVDR-GV--CIHTLTKHQE 452
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGH+ ++ + D G LA+CS D T K++N+ ++ T + +L+ H+ +
Sbjct: 445 TGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNI-----------KQSTFVHDLREHTKEI 493
Query: 70 WQVAWAHPQFGT-------LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
+ + W+ GT LAS S+D V +W + G +N H V S+A++P
Sbjct: 494 YTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKML--CSFNGHREPVYSLAFSP 551
Query: 123 KEFGLILACGSSDGTI 138
G +A GS D +I
Sbjct: 552 N--GEYIASGSLDKSI 565
Score = 109 (43.4 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 32/119 (26%), Positives = 50/119 (42%)
Query: 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV 115
G LI+ L H GP++ + W G L + S DR ++W W + +E+ H
Sbjct: 355 GELISTLSKHKGPIFSLKWNKK--GDYLLTGSVDRTAVVWDVKAEEWKQQFEF--HSGPT 410
Query: 116 NSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL 174
+ W + A S+D I +L + +T ++ H N V W P GSL
Sbjct: 411 LDVDWRNN---VSFATSSTDSMI-YLCKIGETRP--AKTFTGHQGEVNCVKWDP-TGSL 462
Score = 79 (32.9 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +K+W E K + H + V +A++P+ IAS S D+ + I
Sbjct: 514 LASASFDSTVKLWDAELGKML--CSFNGHREPVYSLAFSPNGEY----IASGSLDKSIHI 567
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
W+ + + T + ++ V W+ G+ + DNSV
Sbjct: 568 WSIKEGKIVKTY---TGNGGIFEVCWNKEGNKIAACFADNSV 606
Score = 76 (31.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW-GLS----KCMIASCSQD 245
L S D+ KIW + ++ + L H+ + + W+P+ G + + +AS S D
Sbjct: 463 LASCSDDSTAKIWNIKQSTFVHD--LREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFD 520
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W + F N + V+++++S G+ + D S+ +W
Sbjct: 521 STVKLWDAELGKMLCSF--NGHREPVYSLAFSPNGEYIASGSLDKSIHIW 568
Score = 61 (26.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 24/88 (27%), Positives = 38/88 (43%)
Query: 219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDV--VWNVSW 276
H V V W P+ L +ASCS D IW + + F+ + + ++ + W
Sbjct: 447 HQGEVNCVKWDPTGSL----LASCSDDSTAKIWN----IKQSTFVHDLREHTKEIYTIRW 498
Query: 277 SLTGD-------ILTVSCG--DNSVSLW 295
S TG LT++ D++V LW
Sbjct: 499 SPTGPGTNNPNKQLTLASASFDSTVKLW 526
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 110 (43.8 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 44/149 (29%), Positives = 67/149 (44%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE ++ + G LA+ D + ++++ + D++ A LKGHSG V
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDC---DNY-------ATLKGHSGAV 113
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++ + G++L S S D+ V +W + G K H S VNS P G L
Sbjct: 114 MELHYNTD--GSMLFSASTDKTVAVWDSETGERVK--RLKGHTSFVNSCY--PARRGPQL 167
Query: 130 AC-GSSDGTISFLTYMSDTNSWESRKIAA 157
C GS DGT+ W+ RK AA
Sbjct: 168 VCTGSDDGTVKL---------WDIRKKAA 187
Score = 71 (30.1 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 26/112 (23%), Positives = 49/112 (43%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+++SGG DN IK+W +K + T + H+D V ++ + S G + S + D V
Sbjct: 208 QIISGGIDNDIKVWDLRQNK-LTYT-MRGHADSVTGLSLS-SEG---SYLLSNAMDNTVR 261
Query: 250 IWTSNDYVTWTPFI------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W + + ++ F+ + SWS G + D+ + W
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPW 313
Score = 43 (20.2 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 21/79 (26%), Positives = 33/79 (41%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWK------QEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
G L L+S DN +++W +E I + + N + +W+P G
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-G- 298
Query: 235 SKCMIASCSQDRKVIIWTS 253
SK IA+ S D + W S
Sbjct: 299 SK--IAAGSADSFLYPWHS 315
>UNIPROTKB|Q32SG6 [details] [associations]
symbol:Q32SG6 "Protein HIRA" species:4577 "Zea mays"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011494 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07569 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006351
GO:GO:0016568 KO:K11293 EMBL:AY940678 RefSeq:NP_001105835.1
UniGene:Zm.22931 ProteinModelPortal:Q32SG6 IntAct:Q32SG6
GeneID:732736 KEGG:zma:732736 Gramene:Q32SG6 Uniprot:Q32SG6
Length = 964
Score = 135 (52.6 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 63/241 (26%), Positives = 96/241 (39%)
Query: 12 HEDM-IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
HE + I ++ GL AT D V++++++ K + ++ K L+A L+ H G V
Sbjct: 11 HEGLQIFSIDIQTGGLRFATGGGDQKVRIWSMESVHKDNTNNDSKQRLLATLRDHFGSVN 70
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNG---------------NWFKYYEYNNHDSSV 115
V WA + G LAS S D+ ++I G NW + H + V
Sbjct: 71 CVRWA--KHGRYLASGSDDQVILIHERKAGSGTSEFGSGEPPDAENWKVIMTWRGHTADV 128
Query: 116 NSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLS 175
++W+P + LA GS D TI N + + HT V+W P IGS
Sbjct: 129 VDLSWSPDDS--TLASGSLDNTIHIWNM---NNGICTAVLRGHTSLVKGVTWDP-IGSF- 181
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH------SDWVRDVAWA 229
+ S D + IW+ W K E H S + R +AW+
Sbjct: 182 ---------------IASQSDDKTVMIWRTSD--WSLAHKTEGHWTKSLGSTFFRRLAWS 224
Query: 230 P 230
P
Sbjct: 225 P 225
Score = 55 (24.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 238 MIASCSQDRKVIIWTSNDYVTWTPFIM--NTFDDVVWNVSWSLTGDILTVSCGDNSVS 293
+IA SQDR + +WT+ + P + + F V ++SWS G L D S +
Sbjct: 308 VIAIGSQDRTITVWTT---ASARPLFVARHFFSQSVVDLSWSPDGYSLFACSLDGSAA 362
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 126 (49.4 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C +D T++VF ++ G + E+K H
Sbjct: 609 LVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFK-----------AETGEKLLEIKAHE 657
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V A++ +A+CS D+KV IW G + Y+ H VN +
Sbjct: 658 DEVLCCAFSTDD--RFIATCSVDKKVKIWNSMTGELV--HTYDEHSEQVNCCHFTNSSHH 713
Query: 127 LILACGSSD 135
L+LA GSSD
Sbjct: 714 LLLATGSSD 722
Score = 67 (28.6 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 31/122 (25%), Positives = 53/122 (43%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L +G D +K+W K T H++ V ++P K ++ASCS D + +
Sbjct: 716 LATGSSDCFLKLWDLN-QKECRNTMF-GHTNSVNHCRFSPD---DK-LLASCSADGTLKL 769
Query: 251 W---TSNDY--VTWTPFIMNTFDD------VVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
W ++N+ + F +N D +V SWS G + V+ N + L+ +T
Sbjct: 770 WDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAA-KNKIFLFDIHT 828
Query: 300 DG 301
G
Sbjct: 829 SG 830
Score = 52 (23.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K L+S D I++W + DK I L H + V+D L + S S D V
Sbjct: 1016 KTLISSSDDAEIQVWNWQLDKCIF---LRGHQETVKDFRL-----LKNSRLLSWSFDGTV 1067
Query: 249 IIW 251
+W
Sbjct: 1068 KVW 1070
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 187 VAKRLVSGGCDN-LIKIWK-QEGDKW-----IEETKLENHSDWVRDVAWAP 230
V L++ G DN I+IW G+ + E H WV D+ ++P
Sbjct: 1137 VDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSP 1187
Score = 40 (19.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 271 VWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306
VW++ ++ L S D + +W D +CI
Sbjct: 1006 VWHIQFTADEKTLISSSDDAEIQVWNWQLD---KCI 1038
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 124 (48.7 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 37/129 (28%), Positives = 60/129 (46%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C +D T++VF ++ G + ++K H
Sbjct: 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFK-----------AETGEKLLDIKAHE 657
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V A++ + +A+CS D+KV IW G + Y+ H VN + K
Sbjct: 658 DEVLCCAFSSDD--SYIATCSADKKVKIWDSATGKLV--HTYDEHSEQVNCCHFTNKSNH 713
Query: 127 LILACGSSD 135
L+LA GS+D
Sbjct: 714 LLLATGSND 722
Score = 69 (29.3 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L +G D +K+W K T H++ V ++P L +ASCS D + +
Sbjct: 716 LATGSNDFFLKLWDLN-QKECRNTMF-GHTNSVNHCRFSPDDEL----LASCSADGTLRL 769
Query: 251 W---TSNDY--VTWTPFIMNTFD---DV---VWNVSWSLTGDILTVSCGDNSVSLWKENT 299
W ++N+ + F +++ D DV V SWS GD + V+ N V L+ +T
Sbjct: 770 WDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHT 828
Query: 300 DG 301
G
Sbjct: 829 SG 830
Score = 51 (23.0 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 189 KRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
K L+S D++I++W Q GD L+ H + V+D L + S S D
Sbjct: 1016 KTLISSSEDSVIQVWNWQTGDYVF----LQAHQETVKDFRL-----LQDSRLLSWSFDGT 1066
Query: 248 VIIW 251
V +W
Sbjct: 1067 VKVW 1070
Score = 46 (21.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 191 LVSGGCDN-LIKIWKQEGDKWIE-------ETKLENHSDWVRDVAWAPSWGLSKCMIAS 241
L++ G DN I+IW + + E H WV DV ++P SK ++++
Sbjct: 1141 LLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPD---SKTLVSA 1196
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 140 (54.3 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 76/299 (25%), Positives = 128/299 (42%)
Query: 11 GHEDMIHDA---EMDYLGLYLATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKGH 65
GH D++ D + D L L + S D T+ ++ N++RN K H +GH
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERN-KVKALHC--------CRGH 188
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
+G V +A GT S S+D+ + IW + E + + S N P++
Sbjct: 189 AGSVDSIAVDGS--GTKFCSGSWDKMLKIW-----STVPTDEEDEMEESTNR----PRKK 237
Query: 126 GLILACGSSDGTISFLT-YMSDTNS--W-ESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
G + I L+ +M +S W ++ +I + + W GSL L G
Sbjct: 238 QKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKST-LTG 296
Query: 182 SKL------GGVAKRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGL 234
+K+ + KRL SG D I++W + D + L +H+ WV V W+P+
Sbjct: 297 NKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT--- 353
Query: 235 SKCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
+ + S S D V +W + P + + +D V +V W+ TG +L+ DN +
Sbjct: 354 HEQQLISGSLDNIVKLWDTRSCKA--PLYDLAAHEDKVLSVDWTDTGLLLSGGA-DNKL 409
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 140 (54.3 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 75/298 (25%), Positives = 126/298 (42%)
Query: 11 GHEDMIHDA---EMDYLGLYLATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKGH 65
GH D++ D + D L L + S D T+ ++ N++RN K H +GH
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERN-KVKALHC--------CRGH 188
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
+G V +A GT S S+D+ + IW + E + + S N K
Sbjct: 189 AGSVDSIAVDGS--GTKFCSGSWDKMLKIW-----STVPTDEEDEMEESTNRPRKKQKTE 241
Query: 126 GLILACGSSDGTISFLTYMSDTNS--W-ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS 182
L L + ++ +M +S W ++ +I + + W GSL L G+
Sbjct: 242 QLGL---TRTPVVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKST-LTGN 297
Query: 183 KL------GGVAKRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLS 235
K+ + KRL SG D I++W + D + L +H+ WV V W+P+
Sbjct: 298 KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT---H 354
Query: 236 KCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
+ + S S D V +W + P + + +D V +V W+ TG +L+ DN +
Sbjct: 355 EQQLISGSLDNIVKLWDTRSCKA--PLYDLAAHEDKVLSVDWTDTGLLLSGGA-DNKL 409
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 140 (54.3 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 76/300 (25%), Positives = 120/300 (40%)
Query: 11 GHEDMIHDA---EMDYLGLYLATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKGH 65
GH D++ D + D L L T S D T+ ++ N++RN K H +GH
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIERN-KVKALHC--------CRGH 188
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRG-DNGNWFKYYEYNNHDSSVNSIAWAP-K 123
+G V +A GT S S+D+ + IW + E N
Sbjct: 189 AGSVDAIAV--DSSGTKFCSGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLT 246
Query: 124 EFGLILACGSSDGTISFLTYMSD---TNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLK 180
L+ G ++ S L +D + SW+ HT+ W G L L
Sbjct: 247 RTPLVTLSGHTEAISSVLWSDADEVCSASWD------HTVRV----WDVESGGLKST-LT 295
Query: 181 GSKL------GGVAKRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWG 233
G+K+ + KRL SG D I++W + D + L +H+ WV V W+P+
Sbjct: 296 GNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHD 355
Query: 234 LSKCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
+ S S D V +W + P + + +D V +V W+ TG +L+ DN +
Sbjct: 356 QQ---LISGSLDNMVKLWDTRSCKA--PLYDLAAHEDKVLSVDWTDTGLLLSGGA-DNKL 409
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 60/242 (24%), Positives = 96/242 (39%)
Query: 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118
I + GH V VA P G + S S D+ + +W G K + H V +
Sbjct: 185 IRTMHGHDHNVSSVA-IMPN-GDHIVSASRDKTMKMWEVATGYCVK--TFTGHREWVRMV 240
Query: 119 AWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELD 178
P + G +LA S+D T+ + E R+ H + C +SW P + +
Sbjct: 241 R--PNQDGTLLASCSNDQTVRVWVVATKECKAELRE-HEHVVEC--ISWAPESAHPTISE 295
Query: 179 LKGS---KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS 235
GS K G L+SG D IK+W + L H +WVR V + P G
Sbjct: 296 ATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCL--MTLVGHDNWVRGVLFHPG-GR- 351
Query: 236 KCMIASCSQDRKVIIWTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL 294
+ SC+ D+ + IW DY ++ + V ++ + + D +V +
Sbjct: 352 --FVVSCADDKTLRIW---DYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV 406
Query: 295 WK 296
W+
Sbjct: 407 WE 408
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 102 (41.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 41/130 (31%), Positives = 62/130 (47%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GHE I+ + G Y+A+ S D TV+++++ +G L+ L G V
Sbjct: 355 SGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDI-----------AEGKLVYTLSIEDG-V 402
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEFGLI 128
VA + P G +A+ S D+ V +W G + E + H SV S+A+AP G
Sbjct: 403 TTVAMS-PD-GLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPN--GKE 458
Query: 129 LACGSSDGTI 138
L GS D TI
Sbjct: 459 LVSGSLDKTI 468
Score = 84 (34.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 35/120 (29%), Positives = 52/120 (43%)
Query: 189 KRLVSGGCDNLIKIW-----KQEGDKWIEETK----LENHSDWVRDVAWAPS--WGLSKC 237
K LVSG D IK+W +Q+ + + K E H D+V V P W
Sbjct: 457 KELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHW----- 511
Query: 238 MIASCSQDRKVIIWTSNDYVTWTPFIM-NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
+ S S+DR V W D +T +M + V +V+ S TG++ GD +W+
Sbjct: 512 -VMSGSKDRGVQFW---DPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWR 567
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 99 (39.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+D+I + LG LA+ S D T++++ D+ K +E K H+ PV
Sbjct: 58 GHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKS-----------SEFKAHTAPVR 106
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V ++ G LAS S D+ + +W F Y Y H V ++P + LI++
Sbjct: 107 SVDFSAD--GQFLASASEDKSIKVWNMYRQR-FLYSLYR-HTHWVRCAKFSP-DGRLIVS 161
Query: 131 C 131
C
Sbjct: 162 C 162
Score = 85 (35.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S G D+ +KIW +K ++ ++ HS V V++ PS +I + S I+
Sbjct: 201 IASAGSDHTVKIWDIRVNKLLQHYQV--HSGGVNCVSFHPS---GNYLITASSDGTLKIL 255
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
+ +T + V+ VS+S G++ T D V LW+ N D
Sbjct: 256 DLLEGRLIYT---LQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFD 302
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 64/236 (27%), Positives = 106/236 (44%)
Query: 27 YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86
YL + S DHT+ +++++ K+ K GH+ V VAW H +L S
Sbjct: 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFT----GHTAVVEDVAW-HLLHESLFGSV 250
Query: 87 SYDRKVIIWRGDNGNWFK-YYEYNNHDSSVNSIAWAP-KEFGLILACGSSDGTISFLTYM 144
+ D+K++IW N N K + + H + VN +++ P EF ILA GS+D T++
Sbjct: 251 ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLR 308
Query: 145 S---DTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIK 201
+ +S+ES K V W P +E L S G +RL +L K
Sbjct: 309 NLKLKLHSFESHKDEIFQ-----VQWSPH----NETILASS---GTDRRLHVW---DLSK 353
Query: 202 IWKQEGDKWIEETKLE------NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
I +++ + E+ E H+ + D +W P+ +I S S+D + +W
Sbjct: 354 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWIICSVSEDNIMQVW 406
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G+ LA+CS D T+K++++ K+D T + +L+ HS ++
Sbjct: 361 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM----KQD-------TCVHDLQAHSKEIY 409
Query: 71 QVAWA-------HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
+ W+ +P +LAS S+D V +W + G + H V S+A++P
Sbjct: 410 TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCL--HTLTKHQEPVYSVAFSPD 467
Query: 124 EFGLILACGSSD 135
G LA GS D
Sbjct: 468 --GKYLASGSFD 477
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 58/227 (25%), Positives = 92/227 (40%)
Query: 6 NLVDT-G-HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
NL T G H+ I + + G Y+ + D T ++ D+H+ G +
Sbjct: 271 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIW---------DAHT--GEAKQQFP 319
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
HS P V W Q T ASCS D + + R K ++ H + VN+I W P
Sbjct: 320 FHSAPALDVDW---QNNTTFASCSTDMCIHVCRLGCDRPVKTFQ--GHTNEVNAIKWDPS 374
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
G++LA S D T+ + DT + + AH+ + W P + S S
Sbjct: 375 --GMLLASCSDDMTLKIWSMKQDTCVHD---LQAHSKEIYTIKWSPTGPATSN---PNSS 426
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP 230
+ L S D+ +++W E + L H + V VA++P
Sbjct: 427 I-----MLASASFDSTVRLWDVERGVCLHT--LTKHQEPVYSVAFSP 466
Score = 97 (39.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 44/162 (27%), Positives = 67/162 (41%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL+ N + I E GH P
Sbjct: 181 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GGHDVPSN 239
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K+
Sbjct: 240 KDVTSLDWNSD--GTLLATGSYDGFARIWTED-GNLAS--TLGQHKGPIFALKWN-KKGN 293
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 294 YILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 330
Score = 88 (36.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 29/110 (26%), Positives = 47/110 (42%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-----SKCMIASCSQD 245
L S D +KIW + D + + L+ HS + + W+P+ S M+AS S D
Sbjct: 378 LASCSDDMTLKIWSMKQDTCVHD--LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFD 435
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W V + + V++V++S G L D V +W
Sbjct: 436 STVRLWDVERGVCL--HTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 483
Score = 74 (31.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 28/104 (26%), Positives = 48/104 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W E + L H + V VA++P K +AS S D+ V I
Sbjct: 429 LASASFDSTVRLWDVERGVCLHT--LTKHQEPVYSVAFSPD---GK-YLASGSFDKCVHI 482
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T + +++++ ++ V W+ GD + S D SV
Sbjct: 483 WN-----TQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 521
Score = 72 (30.4 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 23/88 (26%), Positives = 39/88 (44%)
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW 276
+ H++ V + W PS G+ ++ASCS D + IW+ + ++ + W
Sbjct: 360 QGHTNEVNAIKWDPS-GM---LLASCSDDMTLKIWSMKQDTCVHD--LQAHSKEIYTIKW 413
Query: 277 SLTG--------DILTVSCG-DNSVSLW 295
S TG I+ S D++V LW
Sbjct: 414 SPTGPATSNPNSSIMLASASFDSTVRLW 441
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 44/150 (29%), Positives = 72/150 (48%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G +ATC D +V ++ D D+ Q ++ L+ HS V VAW HP G +L
Sbjct: 120 GHLIATCGRDKSVWLWEFD-----DEEDVQ---CVSVLQPHSQDVKSVAW-HPH-GEVLV 169
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTY- 143
S SYD K+ ++R + +W + + + HDS+V ++P G ILA S D + ++
Sbjct: 170 STSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPS--GDILASCSDDLCVKLWSWE 227
Query: 144 --MSDTNSWESRKIAA--HTIGCNAVSWGP 169
++SW + HT ++W P
Sbjct: 228 GVCGKSSSWMCIATLSGYHTRTIFDLNWSP 257
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 61/248 (24%), Positives = 102/248 (41%)
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE----YNNHDSSVNSI 118
+ H + V W+ P GT +AS S+D V IW+ + E H S V +
Sbjct: 57 EAHKKSIRCVTWS-P-CGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCV 114
Query: 119 AWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVSWGPGIGSLSEL 177
AW P LI CG D ++ +L D + + H+ +V+W P
Sbjct: 115 AWCPSGH-LIATCGR-DKSV-WLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPH------- 164
Query: 178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG-LSK 236
G V LVS DN I ++++E D W +L H V ++PS L+
Sbjct: 165 -------GEV---LVSTSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILAS 214
Query: 237 CMIASCSQ--DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVS 293
C C + + + S+ ++ + +++++WS +L SCG DN +
Sbjct: 215 CSDDLCVKLWSWEGVCGKSSSWMCIAT-LSGYHTRTIFDLNWSPDSQLLA-SCGSDNRLC 272
Query: 294 LWKENTDG 301
++K +G
Sbjct: 273 IYKMPANG 280
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 42/156 (26%), Positives = 66/156 (42%)
Query: 162 CNAVSWGPGIGSLSELDLKGSKL---GGVAKRLVSGGCDNLIKIWK-QEGDKWIEE---T 214
CN WG SL E K + + S D + IWK E E
Sbjct: 44 CNDQLWGSSF-SLPEAHKKSIRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALV 102
Query: 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-TWTPFIMNTFDDVVWN 273
LE H+ V+ VAW PS L IA+C +D+ V +W +D ++ V +
Sbjct: 103 SLEGHTSEVKCVAWCPSGHL----IATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKS 158
Query: 274 VSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
V+W G++L + DN +++++E D W ++
Sbjct: 159 VAWHPHGEVLVSTSYDNKINVYREELDD-WTVFAQL 193
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 43/158 (27%), Positives = 69/158 (43%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQ-KGTLIAELKGHSGPVW 70
H+ I G Y+A+ S D TV ++ + ++HS + + L+GH+ V
Sbjct: 59 HKKSIRCVTWSPCGTYIASASFDGTVTIWKIS------EAHSAPEMEALVSLEGHTSEVK 112
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEFGLIL 129
VAW P G L+A+C D+ V +W D+ + H V S+AW P G +L
Sbjct: 113 CVAWC-PS-GHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPH--GEVL 168
Query: 130 ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167
S D I+ Y + + W + A G ++ W
Sbjct: 169 VSTSYDNKIN--VYREELDDWT---VFAQLSGHDSTVW 201
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-WFKYYEYNN-HDSSVN 116
+ +LK + +W ++W H G++L S DR + +W N W + H S+
Sbjct: 7 VQKLKASNKRLWSLSWNHK--GSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKSIR 64
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK----IAAHTIGCNAVSWGPGIG 172
+ W+P G +A S DGT++ + +S+ +S + + HT V+W P G
Sbjct: 65 CVTWSP--CGTYIASASFDGTVT-IWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPS-G 120
Query: 173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE-ETKLENHSDWVRDVAWAP 230
L + + G D + +W+ + ++ ++ + L+ HS V+ VAW P
Sbjct: 121 HL----------------IATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHP 163
Score = 113 (44.8 bits), Expect = 0.00076, P = 0.00076
Identities = 40/132 (30%), Positives = 64/132 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDK-WIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
L+S G D +IK+W + D+ W L E H +R V W+P G IAS S D V
Sbjct: 29 LISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKSIRCVTWSPC-GT---YIASASFDGTV 84
Query: 249 IIWTSNDYVTWTPFI-----MNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGA 302
IW ++ + P + + V V+W +G ++ +CG D SV LW+ + +
Sbjct: 85 TIWKISEAHS-APEMEALVSLEGHTSEVKCVAWCPSGHLIA-TCGRDKSVWLWEFDDEED 142
Query: 303 WQCITEMGKTSE 314
QC++ + S+
Sbjct: 143 VQCVSVLQPHSQ 154
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 79/301 (26%), Positives = 125/301 (41%)
Query: 11 GHEDMIHDA---EMDYLGLYLATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKGH 65
GH D++ D + D L L + S D T+ ++ N++RN K H +GH
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERN-KVKALHC--------CRGH 188
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK-- 123
+G V +A GT S S+D+ + IW + E + + S N K
Sbjct: 189 AGSVDSIAV--DSTGTKFCSGSWDKMLKIW-----STVPTDEEDEMEESTNRPRKKQKTE 241
Query: 124 EFGL----ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
+ GL I+ IS + + SD S HTI W GSL L
Sbjct: 242 QLGLTRTPIVTLSGHKEAISSVLW-SDAEEICSASWD-HTIKV----WDVESGSLKST-L 294
Query: 180 KGSKL------GGVAKRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSW 232
G+K+ + KRL SG D I++W + D + L +H+ WV V W+P+
Sbjct: 295 TGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT- 353
Query: 233 GLSKCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNS 291
+ + S S D V +W + P + + +D V +V W+ +G +L+ DN
Sbjct: 354 --HEQQLISGSLDNMVKLWDTRSCKA--PLYDLAAHEDKVLSVDWTDSGLLLSGGA-DNK 408
Query: 292 V 292
+
Sbjct: 409 L 409
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 110 (43.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L +G D I +W K T LENH+D V ++W P + ++AS S DRK++
Sbjct: 277 LATGSADKTIGLWDLRNLKTKLHT-LENHTDSVTSISWHP---FEEAVLASASYDRKIMF 332
Query: 251 W---------TSNDYVTWTP---FIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWK 296
W T D P F+ + + + SW+L +L + DN + +WK
Sbjct: 333 WDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLCSAAEDNLLQVWK 391
Score = 70 (29.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 38/142 (26%), Positives = 59/142 (41%)
Query: 34 DHTVKVFNLDRNLKKDDSHSQK---GTLIA--ELKGHSGPVWQVAWAHPQFGTLLASCSY 88
DH +V N R + D S Q GT+ EL GH + ++W+ P LA+
Sbjct: 136 DHKGEV-NKARVMIWDRSKHQSVPTGTVNPQMELLGHKQEGFGLSWS-PHVAGHLAT--- 190
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFL-TYMSDT 147
R + + +N Y +H S VN + P LI S D T+ L T +++T
Sbjct: 191 GRDLTTYTKNNKALQPVRTYTHHSSIVNDVQHHPLHSSLI-GTVSDDITLQILDTRVAET 249
Query: 148 NSWESRKIAAHTIGCNAVSWGP 169
+ H NA+++ P
Sbjct: 250 TRAAATAEGQHRDAINAIAFNP 271
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 127 (49.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 39/128 (30%), Positives = 67/128 (52%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD--SHSQKGTLIAELK-GHSG 67
GH + ++ + D G+ LA+CS D T+K++++ ++ D +HS++ I +K +G
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE---IYTIKWSPTG 416
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
P A ++P +LAS S+D V +W + G + H V S+A++P G
Sbjct: 417 P----ATSNPNSNIMLASASFDSTVRLWDVERGVCI--HTLTKHQEPVYSVAFSPD--GK 468
Query: 128 ILACGSSD 135
LA GS D
Sbjct: 469 YLASGSFD 476
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 58/227 (25%), Positives = 91/227 (40%)
Query: 6 NLVDT-G-HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
NL T G H+ I + + G Y+ + D T ++ D+H+ G +
Sbjct: 270 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIW---------DAHT--GEAKQQFP 318
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
HS P V W Q T ASCS D + + R K ++ H + VN+I W P
Sbjct: 319 FHSAPALDVDW---QNNTTFASCSTDMCIHVCRLGCDRPVKTFQ--GHTNEVNAIKWDPS 373
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
G++LA S D T+ + D + + AH+ + W P + S S
Sbjct: 374 --GMLLASCSDDMTLKIWSMKQDACVHD---LQAHSKEIYTIKWSPTGPATSN---PNSN 425
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP 230
+ L S D+ +++W E I L H + V VA++P
Sbjct: 426 I-----MLASASFDSTVRLWDVERGVCIHT--LTKHQEPVYSVAFSP 465
Score = 97 (39.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 44/162 (27%), Positives = 67/162 (41%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL+ N + I E GH P
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GGHDVPSN 238
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K+
Sbjct: 239 KDVTSLDWNSD--GTLLATGSYDGFARIWTED-GNLAS--TLGQHKGPIFALKWN-KKGN 292
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 293 YILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 329
Score = 87 (35.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/110 (26%), Positives = 47/110 (42%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-----SKCMIASCSQD 245
L S D +KIW + D + + L+ HS + + W+P+ S M+AS S D
Sbjct: 377 LASCSDDMTLKIWSMKQDACVHD--LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFD 434
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W V + + V++V++S G L D V +W
Sbjct: 435 STVRLWDVERGVCI--HTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 76 (31.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W E I L H + V VA++P K +AS S D+ V I
Sbjct: 428 LASASFDSTVRLWDVERGVCIHT--LTKHQEPVYSVAFSPD---GK-YLASGSFDKCVHI 481
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T + +++++ ++ V W+ GD + S D SV
Sbjct: 482 WN-----TQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 520
Score = 73 (30.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW 276
+ H++ V + W PS G+ ++ASCS D + IW+ + ++ + W
Sbjct: 359 QGHTNEVNAIKWDPS-GM---LLASCSDDMTLKIWSMKQDACVHD--LQAHSKEIYTIKW 412
Query: 277 SLTG--------DILTVSCG-DNSVSLW 295
S TG +I+ S D++V LW
Sbjct: 413 SPTGPATSNPNSNIMLASASFDSTVRLW 440
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 127 (49.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 39/128 (30%), Positives = 67/128 (52%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD--SHSQKGTLIAELK-GHSG 67
GH + ++ + D G+ LA+CS D T+K++++ ++ D +HS++ I +K +G
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE---IYTIKWSPTG 416
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
P A ++P +LAS S+D V +W + G + H V S+A++P G
Sbjct: 417 P----ATSNPNSNIMLASASFDSTVRLWDVERGVCI--HTLTKHQEPVYSVAFSPD--GK 468
Query: 128 ILACGSSD 135
LA GS D
Sbjct: 469 YLASGSFD 476
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 58/227 (25%), Positives = 91/227 (40%)
Query: 6 NLVDT-G-HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
NL T G H+ I + + G Y+ + D T ++ D+H+ G +
Sbjct: 270 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIW---------DAHT--GEAKQQFP 318
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
HS P V W Q T ASCS D + + R K ++ H + VN+I W P
Sbjct: 319 FHSAPALDVDW---QNNTTFASCSTDMCIHVCRLGCDRPVKTFQ--GHTNEVNAIKWDPS 373
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
G++LA S D T+ + D + + AH+ + W P + S S
Sbjct: 374 --GMLLASCSDDMTLKIWSMKQDACVHD---LQAHSKEIYTIKWSPTGPATSN---PNSN 425
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP 230
+ L S D+ +++W E I L H + V VA++P
Sbjct: 426 I-----MLASASFDSTVRLWDVERGVCIHT--LTKHQEPVYSVAFSP 465
Score = 97 (39.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 44/162 (27%), Positives = 67/162 (41%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL+ N + I E GH P
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GGHDVPSN 238
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K+
Sbjct: 239 KDVTSLDWNSD--GTLLATGSYDGFARIWTED-GNLAS--TLGQHKGPIFALKWN-KKGN 292
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 293 YILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 329
Score = 87 (35.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/110 (26%), Positives = 47/110 (42%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-----SKCMIASCSQD 245
L S D +KIW + D + + L+ HS + + W+P+ S M+AS S D
Sbjct: 377 LASCSDDMTLKIWSMKQDACVHD--LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFD 434
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W V + + V++V++S G L D V +W
Sbjct: 435 STVRLWDVERGVCI--HTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 76 (31.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W E I L H + V VA++P K +AS S D+ V I
Sbjct: 428 LASASFDSTVRLWDVERGVCIHT--LTKHQEPVYSVAFSPD---GK-YLASGSFDKCVHI 481
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T + +++++ ++ V W+ GD + S D SV
Sbjct: 482 WN-----TQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 520
Score = 73 (30.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW 276
+ H++ V + W PS G+ ++ASCS D + IW+ + ++ + W
Sbjct: 359 QGHTNEVNAIKWDPS-GM---LLASCSDDMTLKIWSMKQDACVHD--LQAHSKEIYTIKW 412
Query: 277 SLTG--------DILTVSCG-DNSVSLW 295
S TG +I+ S D++V LW
Sbjct: 413 SPTGPATSNPNSNIMLASASFDSTVRLW 440
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 132 (51.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 52/184 (28%), Positives = 79/184 (42%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C +D T++VF ++ G + E+K H
Sbjct: 345 LVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFK-----------AETGEKLLEIKAHE 393
Query: 67 GPVWQVAW-AHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
V A+ A +F +A+CS D+KV IW G + Y+ H VN +
Sbjct: 394 DEVLCCAFSADDRF---IATCSVDKKVKIWNSVTGELVQ--SYDEHSEQVNCCHFTNNSN 448
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGS-K 183
L+LA GSSD + + D N E R + HT + + P L+ G+ K
Sbjct: 449 HLLLATGSSD----YFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLK 504
Query: 184 LGGV 187
L V
Sbjct: 505 LWDV 508
Score = 55 (24.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K ++S D+ I++W + + E L+ H + V+D L + S S D V
Sbjct: 761 KNVISSSDDSAIQVWNWQSE---ETVSLQAHQETVKDFRL-----LKNSRLLSWSFDGTV 812
Query: 249 IIW 251
+W
Sbjct: 813 KVW 815
Score = 41 (19.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 187 VAKRLVSGGCDN-LIKIWKQEGDKWIE-------ETKLENHSDWVRDVAWAP 230
V L++ G DN I+IW + + E H WV D+ ++P
Sbjct: 882 VDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSP 933
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 95 (38.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP--SWGLSKCMIASCS-QDR 246
+L++GG DN+I++W + T L +H D + + + ++ LS M SC D
Sbjct: 203 QLITGGIDNVIRVWDIRNQEDPLYT-LASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDI 261
Query: 247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 306
+ + + T+ N F+ + SWS+ G + D V +W NT C+
Sbjct: 262 RPYAPPNRNIKTFNG-AQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCL 320
Score = 83 (34.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 32/127 (25%), Positives = 55/127 (43%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI--AELKGHSGP 68
GH+ I+ + + G LA+ SD + ++N+ G I + LKGH G
Sbjct: 60 GHKGEIYSCKFNSYGTALASGGSDKEIFLWNV------------YGECINYSVLKGHKGT 107
Query: 69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLI 128
+ ++ W+ + +C+ D+ + +W + G K H VNS A + L+
Sbjct: 108 ILELHWSTDS-NEIYTACT-DKSIGVWDSNKGELIK--RIREHSGVVNSCCPARRGPPLV 163
Query: 129 LACGSSD 135
A GS D
Sbjct: 164 -ASGSDD 169
Score = 81 (33.6 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 25/102 (24%), Positives = 46/102 (45%)
Query: 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118
I +L GH G ++ + +GT LAS D+++ +W G Y H ++ +
Sbjct: 55 IMQLIGHKGEIYSCKFN--SYGTALASGGSDKEIFLWNV-YGECINYSVLKGHKGTILEL 111
Query: 119 AWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHT 159
W+ + AC +D +I + D+N E ++I H+
Sbjct: 112 HWSTDSNEIYTAC--TDKSIG----VWDSNKGELIKRIREHS 147
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 106 (42.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 47/168 (27%), Positives = 65/168 (38%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + + G YLA+ S D TV+ ++L + + + T KGH V
Sbjct: 125 GHTEAVISVAFSPTGKYLASGSGDTTVRFWDLS-------TETPQFTA----KGHRHWVL 173
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG---L 127
+AW+ P G LAS + ++ +W GN H + + W P
Sbjct: 174 SIAWS-PD-GKKLASGCKNSQIFLWDPATGNQIGRV-LTGHSKWITCLCWEPLHINPECR 230
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSL 174
LA S DG+I DT KI HT V WG G G L
Sbjct: 231 YLASASKDGSIRIW----DTLMGRCDKILTGHTQSVTCVKWG-GDGLL 273
Score = 75 (31.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 23/106 (21%), Positives = 43/106 (40%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S D IK+W+ K++ T L H V +AW+ S+ +++ S D + +
Sbjct: 400 IASASFDKSIKLWEGRTGKYL--TSLRGHVSAVYQIAWSAD---SRLLVSG-SSDSTLKV 453
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
W + + D V+ WS G + D + +W+
Sbjct: 454 WDAE--TKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIWR 497
Score = 74 (31.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
++ LVSG D+ +K+W E K + L H+D V W+P G +AS +D+
Sbjct: 439 SRLLVSGSSDSTLKVWDAETKKLAID--LPGHADEVFATDWSPD-GQR---VASGGKDKC 492
Query: 248 VIIW 251
+ IW
Sbjct: 493 LRIW 496
>UNIPROTKB|H9L0T1 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
[GO:0071817 "MMXD complex" evidence=IEA] [GO:0097361 "CIA complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104486 OMA:EEEYECV EMBL:AADN02064069
ProteinModelPortal:H9L0T1 Ensembl:ENSGALT00000028398 Uniprot:H9L0T1
Length = 225
Score = 130 (50.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/149 (28%), Positives = 64/149 (42%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGT-----LIAELKG- 64
GHE + D G LA+CS D TV+++ R ++ + GT + L G
Sbjct: 75 GHESTVWSVAFDGSGERLASCSDDKTVRIWQCYRP-GNEEGVACSGTDPTWKCVCNLSGY 133
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN--------WFKYYEY--NNHDSS 114
H+ ++ V+W G L +C D + + + F + H
Sbjct: 134 HTRTIYDVSWCRLT-GALATACGDDAIRVFEESTSSSPQQQQQQPTFSLTAHVPRAHSQD 192
Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTY 143
VN +AW PKE GL+ +C S DG I+F Y
Sbjct: 193 VNCVAWNPKEPGLLASC-SDDGEIAFWKY 220
Score = 126 (49.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 65/237 (27%), Positives = 100/237 (42%)
Query: 28 LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87
LATCS D +V V+++D D+ + ++ L H+ V V W HP LLAS S
Sbjct: 3 LATCSRDKSVWVWDVD-----DEEEYE---CVSVLNSHTQDVKHVVW-HPN-QELLASAS 52
Query: 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS-FLTYM-- 144
YD V ++ + +W H+S+V S+A+ G LA S D T+ + Y
Sbjct: 53 YDDTVKLYHEEEDDWVCCATLEGHESTVWSVAFDGS--GERLASCSDDKTVRIWQCYRPG 110
Query: 145 -------SDTN-SWES--RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG 194
S T+ +W+ HT VSW G+L+ + G A R+
Sbjct: 111 NEEGVACSGTDPTWKCVCNLSGYHTRTIYDVSWCRLTGALA------TACGDDAIRVFEE 164
Query: 195 GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
+ + +Q+ + HS V VAW P ++ASCS D ++ W
Sbjct: 165 STSSSPQQQQQQPTFSLTAHVPRAHSQDVNCVAWNPK---EPGLLASCSDDGEIAFW 218
Score = 120 (47.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 37/129 (28%), Positives = 62/129 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +K++ +E D W+ LE H V W+ ++ S +ASCS D+ V I
Sbjct: 48 LASASYDDTVKLYHEEEDDWVCCATLEGHESTV----WSVAFDGSGERLASCSDDKTVRI 103
Query: 251 WT------------SNDYVTWTPF--IMNTFDDVVWNVSWS-LTGDILTVSCGDNSVSLW 295
W S TW + +++VSW LTG + T +CGD+++ ++
Sbjct: 104 WQCYRPGNEEGVACSGTDPTWKCVCNLSGYHTRTIYDVSWCRLTGALAT-ACGDDAIRVF 162
Query: 296 KENTDGAWQ 304
+E+T + Q
Sbjct: 163 EESTSSSPQ 171
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 93 (37.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
LKGH V + W + + S S D KVI+W N K + + V + A+A
Sbjct: 59 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN--KEHAVTMPCTWVMACAYA 114
Query: 122 PKEFGLILACGSSDGTISF--LTYMSDTNSWESRK-IAAHTIGCNAVSW 167
P G +ACG D S LT+ + N +K +A HT +A S+
Sbjct: 115 PS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 161
Score = 85 (35.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 38/147 (25%), Positives = 59/147 (40%)
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-- 234
LDL S+ G VSGGCD +W + I+ E H + V + PS
Sbjct: 202 LDLAPSETGNT---FVSGGCDKKAMVWDMRSGQCIQA--FETHESDINSVRYYPSGDAFA 256
Query: 235 -----SKCMIASCSQDRKVIIWT---------SNDYVTWTPFIMNTFDDVVWNVSWS-LT 279
+ C + DR+V I++ S D+ + ++D NV W L
Sbjct: 257 SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV-WDVLK 315
Query: 280 GDILTVSCG-DNSVSLWKENTDGAWQC 305
G +++ G +N VS + + DG C
Sbjct: 316 GSRVSILFGHENRVSTLRVSPDGTAFC 342
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/131 (31%), Positives = 61/131 (46%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+ + D + + G +L T S DH +K+F++ RNL+++ + +GH
Sbjct: 314 HKSTVMDLKWNDNGNWLVTASRDHLLKLFDI-RNLREE---------VQVFRGHKKEASS 363
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC 131
V+W HP L S D ++ W E HDS V ++AW P G IL
Sbjct: 364 VSW-HPIHEGLFCSGGSDGSILFWNVGTDKEIGCVE-TAHDSIVWTLAWHP--LGHILCS 419
Query: 132 GSSDGTISFLT 142
GS+D TI F T
Sbjct: 420 GSNDHTIKFWT 430
Score = 98 (39.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLS 235
+DLK + G LV+ D+L+K++ + EE ++ H V+W P +
Sbjct: 319 MDLKWNDNGNW---LVTASRDHLLKLFDIRNLR--EEVQVFRGHKKEASSVSWHP---IH 370
Query: 236 KCMIASCSQDRKVIIWT-SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL 294
+ + S D ++ W D + D +VW ++W G IL D+++
Sbjct: 371 EGLFCSGGSDGSILFWNVGTDKEIGC--VETAHDSIVWTLAWHPLGHILCSGSNDHTIKF 428
Query: 295 WKENTDG 301
W N G
Sbjct: 429 WTRNRPG 435
Score = 68 (29.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 52 HSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII---WRGDNGNW 102
H QKG +++ K + P+ ++ W P+ G LA+ + ++ W DNGNW
Sbjct: 280 HPQKGMIVSGSKDNQQPI-KI-W-DPKSGIALATLHAHKSTVMDLKWN-DNGNW 329
>TAIR|locus:2014210 [details] [associations]
symbol:SEH1H "AT1G64350" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GO:GO:0005635 Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K14299 EMBL:AF370222 EMBL:AY059116 IPI:IPI00519579
RefSeq:NP_564830.1 UniGene:At.25592 ProteinModelPortal:Q93VR9
SMR:Q93VR9 STRING:Q93VR9 PRIDE:Q93VR9 EnsemblPlants:AT1G64350.1
GeneID:842741 KEGG:ath:AT1G64350 TAIR:At1g64350 InParanoid:Q93VR9
OMA:WAPNIGR PhylomeDB:Q93VR9 ProtClustDB:CLSN2689020
ArrayExpress:Q93VR9 Genevestigator:Q93VR9 Uniprot:Q93VR9
Length = 326
Score = 101 (40.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 30/118 (25%), Positives = 54/118 (45%)
Query: 198 NLIKIWK--QEGDKWIEETKL---ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW- 251
N KIW+ + ++W+ +L E+ D V ++WAP+ G ++A + + + IW
Sbjct: 199 NSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNIGRPYEVVAVATH-KGIGIWH 257
Query: 252 --TSNDYVTWTPF----IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 303
+ D P ++ VW + W ++G L + D V LW+ N +G W
Sbjct: 258 VGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGEW 315
Score = 75 (31.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 78 QFGTLLASCSYDRKVIIWRGDNGNWFKYY---EYNNHDSSVNSIAWAPKEFGLILACGSS 134
Q G LA+ S + K+ I+ + + + +SS+ I W P E+G +AC
Sbjct: 19 QSGDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCE 78
Query: 135 DGTISFLTYMSD 146
DG++S +S+
Sbjct: 79 DGSLSIWEELSE 90
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 37/132 (28%), Positives = 65/132 (49%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G LA+CS D T+K++++ K+D+ + +L+ H+ ++
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM----KQDNC-------VHDLQAHNKEIY 395
Query: 71 QVAWA-------HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
+ W+ +P +LAS S+D V +W D G + H V S+A++P
Sbjct: 396 TIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRG--ICIHTLTKHQEPVYSVAFSPD 453
Query: 124 EFGLILACGSSD 135
G LA GS D
Sbjct: 454 --GRYLASGSFD 463
Score = 92 (37.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 43/162 (26%), Positives = 66/162 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL N + I E G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIRE-GGQDVPSN 225
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K+
Sbjct: 226 KDVTSLDWNSE--GTLLATGSYDGFARIWTKD-GNLAS--TLGQHKGPIFALKWN-KKGN 279
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVSW 167
IL+ G TI + D ++ E++++ H+ V W
Sbjct: 280 FILSAGVDKTTIIW-----DAHTGEAKQLFPFHSAPALDVDW 316
Score = 90 (36.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW-GLSK----CMIASCSQD 245
L S D +KIW + D + + L+ H+ + + W+P+ G S M+AS S D
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHD--LQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFD 421
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
V +W + + + + V++V++S G L D V +W T GA
Sbjct: 422 STVRLWDVDRGICI--HTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT-GA 475
Score = 81 (33.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W + D+ I L H + V VA++P G +AS S D+ V I
Sbjct: 415 LASASFDSTVRLW--DVDRGICIHTLTKHQEPVYSVAFSPD-GR---YLASGSFDKCVHI 468
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T T +++++ ++ V W+ GD + S D SV
Sbjct: 469 WN-----TQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 71 (30.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SND 255
D I + K D+ I+ + H++ V + W P+ L +ASCS D + IW+ D
Sbjct: 328 DMCIHVCKLGQDRPIKT--FQGHTNEVNAIKWDPTGNL----LASCSDDMTLKIWSMKQD 381
Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTG--------DILTVSCG-DNSVSLW 295
+ + ++ + WS TG +++ S D++V LW
Sbjct: 382 NCVHD---LQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLW 427
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 127 (49.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 40/128 (31%), Positives = 67/128 (52%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD--SHSQKGTLIAELK-GHSG 67
GH + ++ + D G+ LA+CS D T+K++++ ++ D +HS++ I +K +G
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE---IYTIKWSPTG 413
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
P A ++P +LAS S+D V +W + G + H V SIA++P G
Sbjct: 414 P----ATSNPNSSIMLASASFDSTVRLWDVEQG--VCTHTLTKHQEPVYSIAFSPD--GK 465
Query: 128 ILACGSSD 135
LA GS D
Sbjct: 466 YLASGSFD 473
Score = 91 (37.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 30/111 (27%), Positives = 49/111 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-----SKCMIASCSQD 245
L S D +KIW + D + + L+ HS + + W+P+ S M+AS S D
Sbjct: 374 LASCSDDMTLKIWSMKQDACVHD--LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFD 431
Query: 246 RKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W V T T + + V+++++S G L D V +W
Sbjct: 432 STVRLWDVEQGVCTHT---LTKHQEPVYSIAFSPDGKYLASGSFDKCVHIW 479
Score = 91 (37.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 43/162 (26%), Positives = 66/162 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL+ N + I E H P
Sbjct: 177 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GWHDVPSN 235
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA SYD IW +NGN H + ++ W K+
Sbjct: 236 KDVTSLDWNSD--GTLLAMGSYDGFARIWT-ENGNLAS--TLGQHKGPIFALKWN-KKGN 289
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 290 YILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 326
Score = 75 (31.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/104 (25%), Positives = 49/104 (47%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W E + + L H + V +A++P K +AS S D+ V I
Sbjct: 425 LASASFDSTVRLWDVE--QGVCTHTLTKHQEPVYSIAFSPD---GK-YLASGSFDKCVHI 478
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T + +++++ ++ V W+ GD + S D SV
Sbjct: 479 WN-----TQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSV 517
Score = 72 (30.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/88 (26%), Positives = 39/88 (44%)
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW 276
+ H++ V + W PS G+ ++ASCS D + IW+ + ++ + W
Sbjct: 356 QGHTNEVNAIKWDPS-GM---LLASCSDDMTLKIWSMKQDACVHD--LQAHSKEIYTIKW 409
Query: 277 SLTG--------DILTVSCG-DNSVSLW 295
S TG I+ S D++V LW
Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLW 437
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 95 (38.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 35/109 (32%), Positives = 49/109 (44%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
LKGH V + W + L S S D KVI+W N K + + V + A+A
Sbjct: 59 LKGHGNKVLCMDWCKDK--RRLVSSSQDGKVIVWDSFTTN--KEHAVTMPCTWVMACAYA 114
Query: 122 PKEFGLILACGSSDGTISF--LTYMSDTNSWESRK-IAAHTIGCNAVSW 167
P G +ACG D S LT+ + N +K +A HT +A S+
Sbjct: 115 PS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 161
Score = 82 (33.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 30/126 (23%), Positives = 52/126 (41%)
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-- 234
LDL S+ G VSGGCD +W + ++ E H + V + PS
Sbjct: 201 LDLAPSETGNT---FVSGGCDKKAMVWDMRSGQCVQA--FETHESDINSVRYYPSGDAFA 255
Query: 235 -----SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 289
+ C + DR+V I++ + F ++ D +SL+G +L D
Sbjct: 256 SGSDDATCRLYDLRADREVAIYSKESII----FGASSVD-------FSLSGRLLFAGYND 304
Query: 290 NSVSLW 295
++++W
Sbjct: 305 YTINVW 310
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 132 (51.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 52/184 (28%), Positives = 79/184 (42%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C +D T++VF ++ G + E+K H
Sbjct: 609 LVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFK-----------AETGEKLLEIKAHE 657
Query: 67 GPVWQVAW-AHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
V A+ A +F +A+CS D+KV IW G + Y+ H VN +
Sbjct: 658 DEVLCCAFSADDRF---IATCSVDKKVKIWNSVTGELVQ--SYDEHSEQVNCCHFTNNSN 712
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGS-K 183
L+LA GSSD + + D N E R + HT + + P L+ G+ K
Sbjct: 713 HLLLATGSSD----YFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLK 768
Query: 184 LGGV 187
L V
Sbjct: 769 LWDV 772
Score = 55 (24.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K ++S D+ I++W + + E L+ H + V+D L + S S D V
Sbjct: 1016 KNVISSSDDSAIQVWNWQSE---ETVSLQAHQETVKDFRL-----LKNSRLLSWSFDGTV 1067
Query: 249 IIW 251
+W
Sbjct: 1068 KVW 1070
Score = 41 (19.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 187 VAKRLVSGGCDN-LIKIWKQEGDKWIE-------ETKLENHSDWVRDVAWAP 230
V L++ G DN I+IW + + E H WV D+ ++P
Sbjct: 1137 VDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSP 1188
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 136 (52.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 50/189 (26%), Positives = 85/189 (44%)
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVSWG 168
NH+ +VN I ++ ++ A S + ++ + + ++ +A T + +S
Sbjct: 191 NHNGAVNRIRSMDQQSNIV-ATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTIS-N 248
Query: 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK-LENHSDWVRDVA 227
I + LD K+ G RL +G C+N I + W +T+ + H++ V D+
Sbjct: 249 HSIEGYA-LDWS-PKIAG---RLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQ 303
Query: 228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS- 286
W+PS + + ASCS D+ V IW +T D V +SWS + L VS
Sbjct: 304 WSPS---EEKVFASCSIDQTVRIWDIRKPKPAITVKAHTADVNV--ISWSRNVEYLLVSG 358
Query: 287 CGDNSVSLW 295
C D S +W
Sbjct: 359 CDDGSFRVW 367
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 42/179 (23%), Positives = 74/179 (41%)
Query: 4 QLNLVDTGHEDMIHDAE-MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHS--QKGTL-I 59
+L L H ++ MD +AT S + +V ++N+ +LK D+ + K T +
Sbjct: 184 ELQLAFINHNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANHLKALDNETVAPKQTAPL 243
Query: 60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE-YNNHDSSVNSI 118
+ HS + + W+ P+ LA+ + + + W + + H SV I
Sbjct: 244 HTISNHSIEGYALDWS-PKIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDI 302
Query: 119 AWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK------IAAHTIGCNAVSWGPGI 171
W+P E + +C S D T+ W+ RK + AHT N +SW +
Sbjct: 303 QWSPSEEKVFASC-SIDQTVRI---------WDIRKPKPAITVKAHTADVNVISWSRNV 351
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 98 (39.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 41/168 (24%), Positives = 66/168 (39%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + + G YLA+ S D TV+ ++L + H KGH V
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFT-------CKGHRHWVL 162
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG---L 127
++W+ P G LAS + ++++W G H + ++W P
Sbjct: 163 SISWS-PD-GKKLASGCKNGQILLWDPSTGTQVGR-TLTGHSKWITGLSWEPLHMNPECR 219
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSL 174
+A S DG++ + DT + +I HT + WG G G L
Sbjct: 220 YVASSSKDGSVR----VWDTTAGRCERILTGHTQSVTCLRWG-GDGLL 262
Score = 82 (33.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
++ LVSG D+ +K+W + K T L H+D V V W+P G +AS +D+
Sbjct: 428 SRLLVSGSSDSTLKVWDVKAQKLT--TDLPGHADEVYAVDWSPD-GQR---VASGGKDKC 481
Query: 248 VIIW 251
+ IW
Sbjct: 482 LRIW 485
Score = 73 (30.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 26/108 (24%), Positives = 44/108 (40%)
Query: 190 RLV-SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
R+V S D IK+W K++ L H V +AW+ S+ +++ S D +
Sbjct: 387 RIVASASFDKSIKLWDGRTGKYL--ASLRGHVAAVYQIAWSAD---SRLLVSG-SSDSTL 440
Query: 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
+W T + D V+ V WS G + D + +W+
Sbjct: 441 KVWDVKAQKLTTDLPGHA--DEVYAVDWSPDGQRVASGGKDKCLRIWR 486
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 93 (37.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
LKGH V + W + + S S D KVI+W N K + + V + A+A
Sbjct: 101 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN--KEHAVTMPCTWVMACAYA 156
Query: 122 PKEFGLILACGSSDGTISF--LTYMSDTNSWESRK-IAAHTIGCNAVSW 167
P G +ACG D S LT+ + N +K +A HT +A S+
Sbjct: 157 PS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 203
Score = 85 (35.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 38/147 (25%), Positives = 59/147 (40%)
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-- 234
LDL S+ G VSGGCD +W + I+ E H + V + PS
Sbjct: 244 LDLAPSETGNT---FVSGGCDKKAMVWDMRSGQCIQA--FETHESDINSVRYYPSGDAFA 298
Query: 235 -----SKCMIASCSQDRKVIIWT---------SNDYVTWTPFIMNTFDDVVWNVSWS-LT 279
+ C + DR+V I++ S D+ + ++D NV W L
Sbjct: 299 SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV-WDVLK 357
Query: 280 GDILTVSCG-DNSVSLWKENTDGAWQC 305
G +++ G +N VS + + DG C
Sbjct: 358 GSRVSILFGHENRVSTLRVSPDGTAFC 384
>DICTYBASE|DDB_G0276423 [details] [associations]
symbol:hira "histone cell cycle regulation defective
homolog A" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007110 InterPro:IPR011494 InterPro:IPR015943
InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569 Pfam:PF09453
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0276423 GO:GO:0005634 GO:GO:0003714
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:AAFI02000015 KO:K11293 RefSeq:XP_643117.1
ProteinModelPortal:Q86HX1 STRING:Q86HX1 EnsemblProtists:DDB0233325
GeneID:8620522 KEGG:ddi:DDB_G0276423 OMA:DIHPDES
ProtClustDB:CLSZ2497234 Uniprot:Q86HX1
Length = 1114
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 55/189 (29%), Positives = 88/189 (46%)
Query: 109 NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG 168
N H SVNS+ W+ K+ G LA GS D + + +S+ NS K C A G
Sbjct: 65 NAHFHSVNSVKWS-KD-GKYLASGSDD-KLCMIWGLSNNNSL--LKNTTENWVCVATLRG 119
Query: 169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAW 228
+SE+ K + + D I IW E +K+ +KLE H +V+ + W
Sbjct: 120 HA-SDISEVSWSPDN-----KYIATCSFDKSIIIW--ETNKFQMVSKLEEHKGFVKGLTW 171
Query: 229 APSWGLSKCMIASCSQDRKVIIWTSNDYVTWT----PFIMNTFDDVVWNVSWSLTGDILT 284
P L + +AS S+D+ +IIW ++D+V T PF ++ + SW+ G +
Sbjct: 172 DP---LGR-YLASQSEDKSLIIWRTSDWVVETIVTEPF-KHSGNSFFLRPSWTPDGQFIV 226
Query: 285 VSCGDNSVS 293
+ G N+ +
Sbjct: 227 ATHGINNAT 235
Score = 137 (53.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 33/131 (25%), Positives = 60/131 (45%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
++ H ++ + G YLA+ S D ++ L N + ++ +A L+GH+
Sbjct: 63 IENAHFHSVNSVKWSKDGKYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHAS 122
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
+ +V+W+ P +A+CS+D+ +IIW + E H V + W P G
Sbjct: 123 DISEVSWS-PD-NKYIATCSFDKSIIIWETNKFQMVSKLE--EHKGFVKGLTWDP--LGR 176
Query: 128 ILACGSSDGTI 138
LA S D ++
Sbjct: 177 YLASQSEDKSL 187
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 179 LKGSKLGGVAKRLVSGGCDNLIKIW---------KQEGDKWIEETKLENHSDWVRDVAWA 229
+K SK G K L SG D L IW K + W+ L H+ + +V+W+
Sbjct: 74 VKWSKDG---KYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHASDISEVSWS 130
Query: 230 PSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 289
P +K IA+CS D+ +IIW +N + + + V ++W G L D
Sbjct: 131 PD---NK-YIATCSFDKSIIIWETNKFQMVSK--LEEHKGFVKGLTWDPLGRYLASQSED 184
Query: 290 NSVSLWKENTDGAWQCITEMGKTS 313
S+ +W+ + +TE K S
Sbjct: 185 KSLIIWRTSDWVVETIVTEPFKHS 208
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 93 (37.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
LKGH V + W + + S S D KVI+W N K + + V + A+A
Sbjct: 59 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN--KEHAVTMPCTWVMACAYA 114
Query: 122 PKEFGLILACGSSDGTISF--LTYMSDTNSWESRK-IAAHTIGCNAVSW 167
P G +ACG D S LT+ + N +K +A HT +A S+
Sbjct: 115 PS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 161
Score = 83 (34.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-- 234
LDL S+ G VSGGCD +W + ++ E H V V + PS
Sbjct: 201 LDLAPSETGNT---FVSGGCDKKAMVWDMRSGQCVQA--FETHESDVNSVRYYPSGDAFA 255
Query: 235 -----SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 289
+ C + DR+V I++ + F ++ D +SL+G +L D
Sbjct: 256 SGSDDATCRLYDLRADREVAIYSKESII----FGASSVD-------FSLSGRLLFAGYND 304
Query: 290 NSVSLW 295
++++W
Sbjct: 305 YTINVW 310
>RGD|1306419 [details] [associations]
symbol:Elp2 "elongator acetyltransferase complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0008023 "transcription elongation factor complex"
evidence=ISO] [GO:0010950 "positive regulation of endopeptidase
activity" evidence=ISS] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0033588 "Elongator holoenzyme complex"
evidence=ISO;ISS] [GO:0043248 "proteasome assembly" evidence=ISS]
[GO:0046425 "regulation of JAK-STAT cascade" evidence=IEA;ISO]
[GO:0061133 "endopeptidase activator activity" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1306419 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998
GO:GO:0000502 GO:GO:0061133 GO:GO:0043248 GO:GO:0006368
GO:GO:0046425 GO:GO:0033588 CTD:55250 GeneTree:ENSGT00390000000916
HOGENOM:HOG000200623 HOVERGEN:HBG087208 KO:K11374 OrthoDB:EOG40K7Z8
OMA:DCLIRIW EMBL:BC092606 EMBL:BC100661 IPI:IPI00358475
RefSeq:NP_001029317.1 RefSeq:XP_003751798.1 UniGene:Rn.25007
ProteinModelPortal:Q496Z0 STRING:Q496Z0 PhosphoSite:Q496Z0
PRIDE:Q496Z0 Ensembl:ENSRNOT00000020601 GeneID:307545
KEGG:rno:307545 UCSC:RGD:1306419 InParanoid:Q496Z0 NextBio:657555
Genevestigator:Q496Z0 GermOnline:ENSRNOG00000015301 Uniprot:Q496Z0
Length = 821
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/208 (28%), Positives = 91/208 (43%)
Query: 54 QKGTLIAELKGHSGPVWQVAWAHPQFG---TLLASCSYDRKVIIWRGDNGNWFKYYEYNN 110
QK +I L GH+ V + W + G T L S + D +VI W +N K
Sbjct: 46 QKKVVITNLNGHTARVNCLHWIRTEDGSPSTELVSGASDNRVIHWELENNQVLKSVRLQG 105
Query: 111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS----WESRKIAAHTIGC-NAV 165
H+ V ++ G I G SDG L + ++S W S+K + C +
Sbjct: 106 HEGPVYAV------HG-IYQSGPSDGEQHALIASAASDSTVRLW-SKK--GSEVKCLQIL 155
Query: 166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-LIKIWKQEGDKWIEET-KLENHSDWV 223
+G G L + S L +++ G D I ++ Q+ D W ++ L H DW+
Sbjct: 156 KFGDGF----VLTVCLSTLPDTDAPVLACGDDGGRIHLFVQQDD-WFQKMLSLCGHEDWI 210
Query: 224 RDVAWAPSWGLSKCMIASCSQDRKVIIW 251
R V WA ++G +ASCSQD + IW
Sbjct: 211 RGVEWA-TFGRD-LFLASCSQDCLIRIW 236
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 97 (39.2 bits), Expect = 5.8e-05, Sum P(2) = 5.7e-05
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L + D IK+W +++ L H+ WVR ++P L I SCS+D+ + I
Sbjct: 117 LATASEDKSIKVWNMYRQRFLYS--LYRHTHWVRCAKFSPDGRL----IVSCSEDKTIKI 170
Query: 251 W-TSNDYVTWTPFIMNTFDDVVW--N-VSWSLTGDILTVSCGDNSVSLW 295
W T+N +N F D V N V ++ G + + D++V +W
Sbjct: 171 WDTTNKQC------VNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
Score = 96 (38.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 34/121 (28%), Positives = 56/121 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+D++ + LG LA+ S D TV+++ D+ K +E K H+ PV
Sbjct: 58 GHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKS-----------SEFKAHTAPVR 106
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V ++ G LA+ S D+ + +W F Y Y H V ++P + LI++
Sbjct: 107 SVDFSAD--GQFLATASEDKSIKVWNMYRQR-FLYSLYR-HTHWVRCAKFSP-DGRLIVS 161
Query: 131 C 131
C
Sbjct: 162 C 162
Score = 83 (34.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S G D+ +KIW +K ++ ++ HS V V++ PS G + + AS K++
Sbjct: 201 IASAGSDHTVKIWDIRVNKLLQHYQV--HSGGVNCVSFHPS-G-NYIITASSDGTLKILD 256
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
+ + + V+ VS+S G++ + D V LW+ N D
Sbjct: 257 LLEGRLI----YTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFD 302
Score = 71 (30.1 bits), Expect = 5.8e-05, Sum P(2) = 5.7e-05
Identities = 32/108 (29%), Positives = 46/108 (42%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I + G LAT S D + ++N K + + + GH V
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNC-----KPQARAFRYV------GHKDVVT 64
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118
V ++ P G LLAS S DR V +W D K E+ H + V S+
Sbjct: 65 SVQFS-P-LGNLLASASRDRTVRLWIPDKRG--KSSEFKAHTAPVRSV 108
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 93 (37.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
LKGH V + W + + S S D KVI+W N K + + V + A+A
Sbjct: 101 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN--KEHAVTMPCTWVMACAYA 156
Query: 122 PKEFGLILACGSSDGTISF--LTYMSDTNSWESRK-IAAHTIGCNAVSW 167
P G +ACG D S LT+ + N +K +A HT +A S+
Sbjct: 157 PS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 203
Score = 84 (34.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-- 234
LDL S+ G VSGGCD +W + I+ E H + V + PS
Sbjct: 243 LDLAPSETGNT---FVSGGCDKKAMVWDMRSGQCIQS--FETHDSDINSVRYYPSGDAFA 297
Query: 235 -----SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 289
+ C + DR+V I++ + F ++ D +SL+G +L D
Sbjct: 298 SGSDDATCRLYDLRADREVAIYSKESII----FGASSVD-------FSLSGRLLFAGYND 346
Query: 290 NSVSLW 295
++++W
Sbjct: 347 YTINVW 352
>UNIPROTKB|C9J6C8 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00925033
ProteinModelPortal:C9J6C8 SMR:C9J6C8 STRING:C9J6C8
Ensembl:ENST00000431816 ArrayExpress:C9J6C8 Bgee:C9J6C8
Uniprot:C9J6C8
Length = 133
Score = 112 (44.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 32/123 (26%), Positives = 50/123 (40%)
Query: 28 LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87
+A C ++H V ++ + K T + ELK H+G V + WA P+ ++ +C
Sbjct: 23 IAICPNNHEVHIY---------EKSGAKWTKVHELKEHNGQVTGIDWA-PESNRIV-TCG 71
Query: 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT 147
DR +W W + + + WAP E A GS IS + Y
Sbjct: 72 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKF--AVGSGSRVIS-ICYFEQE 128
Query: 148 NSW 150
N W
Sbjct: 129 NDW 131
Score = 105 (42.0 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/105 (23%), Positives = 44/105 (41%)
Query: 200 IKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW 259
+ I+++ G KW + +L+ H+ V + WAP I +C DR +WT TW
Sbjct: 32 VHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN----RIVTCGTDRNAYVWTLKGR-TW 86
Query: 260 TP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 303
P ++ + V W+ + V G +S+ + W
Sbjct: 87 KPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDW 131
>UNIPROTKB|C9JFG9 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925033 ProteinModelPortal:C9JFG9 SMR:C9JFG9
Ensembl:ENST00000427217 Bgee:C9JFG9 Uniprot:C9JFG9
Length = 133
Score = 112 (44.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 32/123 (26%), Positives = 50/123 (40%)
Query: 28 LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87
+A C ++H V ++ + K T + ELK H+G V + WA P+ ++ +C
Sbjct: 23 IAICPNNHEVHIY---------EKSGAKWTKVHELKEHNGQVTGIDWA-PESNRIV-TCG 71
Query: 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT 147
DR +W W + + + WAP E A GS IS + Y
Sbjct: 72 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKF--AVGSGSRVIS-ICYFEQE 128
Query: 148 NSW 150
N W
Sbjct: 129 NDW 131
Score = 105 (42.0 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/105 (23%), Positives = 44/105 (41%)
Query: 200 IKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW 259
+ I+++ G KW + +L+ H+ V + WAP I +C DR +WT TW
Sbjct: 32 VHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN----RIVTCGTDRNAYVWTLKGR-TW 86
Query: 260 TP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 303
P ++ + V W+ + V G +S+ + W
Sbjct: 87 KPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDW 131
>UNIPROTKB|C9JQM8 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925033 ProteinModelPortal:C9JQM8 SMR:C9JQM8
Ensembl:ENST00000458033 Bgee:C9JQM8 Uniprot:C9JQM8
Length = 133
Score = 112 (44.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 32/123 (26%), Positives = 50/123 (40%)
Query: 28 LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87
+A C ++H V ++ + K T + ELK H+G V + WA P+ ++ +C
Sbjct: 23 IAICPNNHEVHIY---------EKSGAKWTKVHELKEHNGQVTGIDWA-PESNRIV-TCG 71
Query: 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT 147
DR +W W + + + WAP E A GS IS + Y
Sbjct: 72 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKF--AVGSGSRVIS-ICYFEQE 128
Query: 148 NSW 150
N W
Sbjct: 129 NDW 131
Score = 105 (42.0 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/105 (23%), Positives = 44/105 (41%)
Query: 200 IKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW 259
+ I+++ G KW + +L+ H+ V + WAP I +C DR +WT TW
Sbjct: 32 VHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN----RIVTCGTDRNAYVWTLKGR-TW 86
Query: 260 TP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 303
P ++ + V W+ + V G +S+ + W
Sbjct: 87 KPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDW 131
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 119 (46.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 39/123 (31%), Positives = 53/123 (43%)
Query: 26 LYLATCSSDHTVKVFNLD-RNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH-------- 76
L +A + ++V++LD + + DDS + T L GHSGPV+ VA+A
Sbjct: 266 LLVAAGMQESYIRVWSLDGKKIPSDDSADEPPTNSRRLIGHSGPVYAVAFAPSATPSENA 325
Query: 77 --PQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS 134
P L S S DR + +W D W Y HD V + W P FG G
Sbjct: 326 VAPTNARWLLSSSADRTIRLWSLDL--WQCMVVYKGHDQPVWDLQWGP--FGHYFVSGGH 381
Query: 135 DGT 137
D T
Sbjct: 382 DKT 384
Score = 60 (26.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 271 VWNVSWSLTGDILTVSCGDNSVSLW 295
+W++SWS+ ++L D +V +W
Sbjct: 491 IWSLSWSVESNVLVSGGADGTVRVW 515
Score = 51 (23.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 167 WGPGIGSLSELDLKGSKLGGV--------AKRLVSGGCDNLIKIWKQEG 207
W G G L + ++G GG+ + LVSGG D +++W G
Sbjct: 472 WDLGPGRLLKR-MRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWDVMG 519
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/110 (23%), Positives = 47/110 (42%)
Query: 143 YMSDTNSWESRKIAAHTIGCNAVSWGPG-IGSLSELDLKGSKLGGVAKRLVSGGCDNLIK 201
Y+ +S + ++ A T G NAV G G+++ L S+ G K L S I
Sbjct: 417 YVFTGSSDRTVRMWAVTTG-NAVRMFTGHTGNITALAC--SRDG---KTLASADDHGSIL 470
Query: 202 IWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
+W + ++ ++ H + W+ SW + ++ S D V +W
Sbjct: 471 LWDLGPGRLLK--RMRGHG---KGGIWSLSWSVESNVLVSGGADGTVRVW 515
>UNIPROTKB|Q5ZIT1 [details] [associations]
symbol:DCAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314410
OMA:NKVQIVS CTD:10238 HOGENOM:HOG000260968 HOVERGEN:HBG050497
KO:K11805 OrthoDB:EOG40P46Z GeneTree:ENSGT00390000006939
EMBL:AADN02056761 EMBL:AADN02056762 EMBL:AADN02056763 EMBL:AJ720703
IPI:IPI00594361 RefSeq:NP_001072972.1 UniGene:Gga.13087 SMR:Q5ZIT1
STRING:Q5ZIT1 Ensembl:ENSGALT00000000697 GeneID:771554
KEGG:gga:771554 InParanoid:Q5ZIT1 NextBio:20921754 Uniprot:Q5ZIT1
Length = 342
Score = 90 (36.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY--VTWTPFIMNTFDDVVW 272
+L NH V +AWAP S C I + + D + +IW P + T + +
Sbjct: 261 RLNNHRACVNGIAWAPH---SSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEIN 317
Query: 273 NVSWSLTGDILTVSCGDNSVSL 294
NV W+ T C +N + +
Sbjct: 318 NVQWASTQPDWIAICYNNCLEI 339
Score = 85 (35.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 1 MVSQLNLVDTGH--EDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD-SHSQKG 56
++ ++NLV +GH +I HD E+ + A D V D +++ D H +
Sbjct: 155 VLGRVNLV-SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GADGSVRMFDLRHLEHS 212
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T+I E H P+ ++ W + Q LA+ + D ++ NNH + VN
Sbjct: 213 TIIYEDPQHH-PLLRLCW-NKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVN 270
Query: 117 SIAWAP 122
IAWAP
Sbjct: 271 GIAWAP 276
>UNIPROTKB|Q32L87 [details] [associations]
symbol:WDR68 "WD repeat domain 68" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314410
OMA:NKVQIVS CTD:10238 HOGENOM:HOG000260968 HOVERGEN:HBG050497
KO:K11805 OrthoDB:EOG40P46Z GeneTree:ENSGT00390000006939
EMBL:DAAA02049321 EMBL:BC109703 IPI:IPI00689532
RefSeq:NP_001033214.1 UniGene:Bt.31136 SMR:Q32L87 STRING:Q32L87
Ensembl:ENSBTAT00000004550 GeneID:516678 KEGG:bta:516678
InParanoid:Q32L87 NextBio:20872286 Uniprot:Q32L87
Length = 342
Score = 90 (36.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY--VTWTPFIMNTFDDVVW 272
+L NH V +AWAP S C I + + D + +IW P + T + +
Sbjct: 261 RLNNHRACVNGIAWAPH---SSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEIN 317
Query: 273 NVSWSLTGDILTVSCGDNSVSL 294
NV W+ T C +N + +
Sbjct: 318 NVQWASTQPDWIAICYNNCLEI 339
Score = 85 (35.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 1 MVSQLNLVDTGH--EDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD-SHSQKG 56
++ ++NLV +GH +I HD E+ + A D V D +++ D H +
Sbjct: 155 VLGRVNLV-SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GADGSVRMFDLRHLEHS 212
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T+I E H P+ ++ W + Q LA+ + D ++ NNH + VN
Sbjct: 213 TIIYEDPQHH-PLLRLCW-NKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVN 270
Query: 117 SIAWAP 122
IAWAP
Sbjct: 271 GIAWAP 276
>UNIPROTKB|E2REP1 [details] [associations]
symbol:DCAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 OMA:NKVQIVS
KO:K11805 GeneTree:ENSGT00390000006939 EMBL:AAEX03006356
RefSeq:XP_003639298.1 ProteinModelPortal:E2REP1 SMR:E2REP1
PRIDE:E2REP1 Ensembl:ENSCAFT00000020578 GeneID:100856670
KEGG:cfa:100856670 NextBio:20898417 Uniprot:E2REP1
Length = 342
Score = 90 (36.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY--VTWTPFIMNTFDDVVW 272
+L NH V +AWAP S C I + + D + +IW P + T + +
Sbjct: 261 RLNNHRACVNGIAWAPH---SSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEIN 317
Query: 273 NVSWSLTGDILTVSCGDNSVSL 294
NV W+ T C +N + +
Sbjct: 318 NVQWASTQPDWIAICYNNCLEI 339
Score = 85 (35.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 1 MVSQLNLVDTGH--EDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD-SHSQKG 56
++ ++NLV +GH +I HD E+ + A D V D +++ D H +
Sbjct: 155 VLGRVNLV-SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GADGSVRMFDLRHLEHS 212
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T+I E H P+ ++ W + Q LA+ + D ++ NNH + VN
Sbjct: 213 TIIYEDPQHH-PLLRLCW-NKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVN 270
Query: 117 SIAWAP 122
IAWAP
Sbjct: 271 GIAWAP 276
>UNIPROTKB|P61962 [details] [associations]
symbol:DCAF7 "DDB1- and CUL4-associated factor 7"
species:9606 "Homo sapiens" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 EMBL:CH471109 GO:GO:0080008
eggNOG:NOG314410 OMA:NKVQIVS EMBL:U94747 EMBL:BC001264
IPI:IPI00006754 RefSeq:NP_005819.3 UniGene:Hs.410596
ProteinModelPortal:P61962 SMR:P61962 DIP:DIP-40363N IntAct:P61962
MINT:MINT-1141032 STRING:P61962 PhosphoSite:P61962 DMDM:48428729
PaxDb:P61962 PRIDE:P61962 DNASU:10238 Ensembl:ENST00000310827
GeneID:10238 KEGG:hsa:10238 UCSC:uc002jbc.3 CTD:10238
GeneCards:GC17P061627 HGNC:HGNC:30915 HPA:HPA022948 HPA:HPA022962
MIM:605973 neXtProt:NX_P61962 PharmGKB:PA165431770
HOGENOM:HOG000260968 HOVERGEN:HBG050497 InParanoid:P61962 KO:K11805
OrthoDB:EOG40P46Z GenomeRNAi:10238 NextBio:38784
ArrayExpress:P61962 Bgee:P61962 CleanEx:HS_WDR68
Genevestigator:P61962 GermOnline:ENSG00000136485 Uniprot:P61962
Length = 342
Score = 90 (36.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY--VTWTPFIMNTFDDVVW 272
+L NH V +AWAP S C I + + D + +IW P + T + +
Sbjct: 261 RLNNHRACVNGIAWAPH---SSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEIN 317
Query: 273 NVSWSLTGDILTVSCGDNSVSL 294
NV W+ T C +N + +
Sbjct: 318 NVQWASTQPDWIAICYNNCLEI 339
Score = 85 (35.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 1 MVSQLNLVDTGH--EDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD-SHSQKG 56
++ ++NLV +GH +I HD E+ + A D V D +++ D H +
Sbjct: 155 VLGRVNLV-SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GADGSVRMFDLRHLEHS 212
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T+I E H P+ ++ W + Q LA+ + D ++ NNH + VN
Sbjct: 213 TIIYEDPQHH-PLLRLCW-NKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVN 270
Query: 117 SIAWAP 122
IAWAP
Sbjct: 271 GIAWAP 276
>UNIPROTKB|F2Z564 [details] [associations]
symbol:DCAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 OMA:NKVQIVS
CTD:10238 KO:K11805 GeneTree:ENSGT00390000006939 EMBL:CU929939
RefSeq:XP_003131342.1 UniGene:Ssc.95972 ProteinModelPortal:F2Z564
SMR:F2Z564 PRIDE:F2Z564 Ensembl:ENSSSCT00000018826 GeneID:100514182
KEGG:ssc:100514182 Uniprot:F2Z564
Length = 342
Score = 90 (36.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY--VTWTPFIMNTFDDVVW 272
+L NH V +AWAP S C I + + D + +IW P + T + +
Sbjct: 261 RLNNHRACVNGIAWAPH---SSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEIN 317
Query: 273 NVSWSLTGDILTVSCGDNSVSL 294
NV W+ T C +N + +
Sbjct: 318 NVQWASTQPDWIAICYNNCLEI 339
Score = 85 (35.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 1 MVSQLNLVDTGH--EDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD-SHSQKG 56
++ ++NLV +GH +I HD E+ + A D V D +++ D H +
Sbjct: 155 VLGRVNLV-SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GADGSVRMFDLRHLEHS 212
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T+I E H P+ ++ W + Q LA+ + D ++ NNH + VN
Sbjct: 213 TIIYEDPQHH-PLLRLCW-NKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVN 270
Query: 117 SIAWAP 122
IAWAP
Sbjct: 271 GIAWAP 276
>MGI|MGI:1919083 [details] [associations]
symbol:Dcaf7 "DDB1 and CUL4 associated factor 7"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1919083
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0080008 eggNOG:NOG314410 OMA:NKVQIVS CTD:10238
HOGENOM:HOG000260968 HOVERGEN:HBG050497 KO:K11805 OrthoDB:EOG40P46Z
EMBL:AK005902 EMBL:AK047435 EMBL:AK165674 EMBL:BC048722
IPI:IPI00262605 RefSeq:NP_082222.1 UniGene:Mm.307455
ProteinModelPortal:P61963 SMR:P61963 STRING:P61963
PhosphoSite:P61963 REPRODUCTION-2DPAGE:P61963 PaxDb:P61963
PRIDE:P61963 Ensembl:ENSMUST00000058438 GeneID:71833 KEGG:mmu:71833
GeneTree:ENSGT00390000006939 InParanoid:P61963 ChiTaRS:DCAF7
NextBio:334652 Bgee:P61963 CleanEx:MM_WDR68 Genevestigator:P61963
GermOnline:ENSMUSG00000049354 Uniprot:P61963
Length = 342
Score = 90 (36.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY--VTWTPFIMNTFDDVVW 272
+L NH V +AWAP S C I + + D + +IW P + T + +
Sbjct: 261 RLNNHRACVNGIAWAPH---SSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEIN 317
Query: 273 NVSWSLTGDILTVSCGDNSVSL 294
NV W+ T C +N + +
Sbjct: 318 NVQWASTQPDWIAICYNNCLEI 339
Score = 85 (35.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 1 MVSQLNLVDTGH--EDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD-SHSQKG 56
++ ++NLV +GH +I HD E+ + A D V D +++ D H +
Sbjct: 155 VLGRVNLV-SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GADGSVRMFDLRHLEHS 212
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T+I E H P+ ++ W + Q LA+ + D ++ NNH + VN
Sbjct: 213 TIIYEDPQHH-PLLRLCW-NKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVN 270
Query: 117 SIAWAP 122
IAWAP
Sbjct: 271 GIAWAP 276
>ZFIN|ZDB-GENE-030131-9511 [details] [associations]
symbol:dcaf7 "ddb1 and cul4 associated factor 7"
species:7955 "Danio rerio" [GO:0051216 "cartilage development"
evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-9511 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0051216
eggNOG:NOG314410 OMA:NKVQIVS CTD:10238 HOGENOM:HOG000260968
HOVERGEN:HBG050497 KO:K11805 OrthoDB:EOG40P46Z
GeneTree:ENSGT00390000006939 EMBL:CU062431 EMBL:BC053157
IPI:IPI00507194 RefSeq:NP_956363.1 UniGene:Dr.79208 STRING:Q7T3E0
Ensembl:ENSDART00000058221 GeneID:337565 KEGG:dre:337565
InParanoid:Q7T3E0 NextBio:20812303 Uniprot:Q7T3E0
Length = 342
Score = 90 (36.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY--VTWTPFIMNTFDDVVW 272
+L NH V +AWAP S C I + + D + +IW P + T + +
Sbjct: 261 RLNNHRACVNGIAWAPH---SSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEIN 317
Query: 273 NVSWSLTGDILTVSCGDNSVSL 294
NV W+ T C +N + +
Sbjct: 318 NVQWASTQPDWIAICYNNCLEI 339
Score = 85 (35.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 1 MVSQLNLVDTGH--EDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD-SHSQKG 56
++ ++NLV +GH +I HD E+ + A D V D +++ D H +
Sbjct: 155 VLGRVNLV-SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GADGSVRMFDLRHLEHS 212
Query: 57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVN 116
T+I E H P+ ++ W + Q LA+ + D ++ NNH + VN
Sbjct: 213 TIIYEDPQHH-PLLRLCW-NKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVN 270
Query: 117 SIAWAP 122
IAWAP
Sbjct: 271 GIAWAP 276
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 93 (37.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
LKGH V + W + + S S D KVI+W N K + + V + A+A
Sbjct: 59 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN--KEHAVTMPCTWVMACAYA 114
Query: 122 PKEFGLILACGSSDGTISF--LTYMSDTNSWESRK-IAAHTIGCNAVSW 167
P G +ACG D S LT+ + N +K +A HT +A S+
Sbjct: 115 PS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 161
Score = 82 (33.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 30/126 (23%), Positives = 52/126 (41%)
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-- 234
LDL S+ G VSGGCD +W + ++ E H + V + PS
Sbjct: 201 LDLAPSETGNT---FVSGGCDKKAMVWDMRSGQCVQA--FETHESDINSVRYYPSGDAFA 255
Query: 235 -----SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 289
+ C + DR+V I++ + F ++ D +SL+G +L D
Sbjct: 256 SGSDDATCRLYDLRADREVAIYSKESII----FGASSVD-------FSLSGRLLFAGYND 304
Query: 290 NSVSLW 295
++++W
Sbjct: 305 YTINVW 310
>UNIPROTKB|F1P3E7 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ EMBL:AADN02012163 EMBL:AADN02012164
EMBL:AADN02012165 IPI:IPI00585040 Ensembl:ENSGALT00000015154
Uniprot:F1P3E7
Length = 684
Score = 108 (43.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD-NGNWFKYYE-YNNHDSSVNSIA 119
L H VW +++ GT LA+ S D VIIW+ D + + K + H V+ IA
Sbjct: 374 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYIA 431
Query: 120 WAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169
W+P + ++ACG D + +L + T ++ +H +V+W P
Sbjct: 432 WSPDD-NYLVACGPDDCSELWL-WNVQTGELRTKMSQSHEDSLTSVAWNP 479
Score = 105 (42.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/138 (29%), Positives = 61/138 (44%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
G LAT S D TV ++ +D D+H K L+ L+GH+ V +AW+ P L+A
Sbjct: 390 GTKLATGSKDTTVIIWQVD-----PDTHQLK--LLKTLEGHAYGVSYIAWS-PDDNYLVA 441
Query: 85 SCSYD--RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT 142
C D ++ +W G + +H+ S+ S+AW P G G G
Sbjct: 442 -CGPDDCSELWLWNVQTGE-LRTKMSQSHEDSLTSVAWNPD--GKRFVTGGQRGQF---- 493
Query: 143 YMSDTN-----SWESRKI 155
Y D N SWE ++
Sbjct: 494 YQCDLNGNLLDSWEGVRV 511
Score = 73 (30.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ SG D+ + IW + + I E L H+ V V+W P M+AS S D V I
Sbjct: 609 IASGSEDHKVYIWHKRSELPIAE--LTGHTRTVNCVSWNPQ---IPSMMASASDDGTVRI 663
Query: 251 WTSNDYV 257
W +V
Sbjct: 664 WGPAPFV 670
Score = 53 (23.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-S 291
G ++ IAS S+D KV IW + +T V VSW+ + S D+ +
Sbjct: 603 GHNEDFIASGSEDHKVYIWHKRSELPIAELTGHT--RTVNCVSWNPQIPSMMASASDDGT 660
Query: 292 VSLW 295
V +W
Sbjct: 661 VRIW 664
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 93 (37.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
LKGH V + W + + S S D KVI+W N K + + V + A+A
Sbjct: 101 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN--KEHAVTMPCTWVMACAYA 156
Query: 122 PKEFGLILACGSSDGTISF--LTYMSDTNSWESRK-IAAHTIGCNAVSW 167
P G +ACG D S LT+ + N +K +A HT +A S+
Sbjct: 157 PS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 203
Score = 83 (34.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-- 234
LDL S+ G VSGGCD +W + ++ E H V V + PS
Sbjct: 243 LDLAPSETGNT---FVSGGCDKKAMVWDMRSGQCVQA--FETHESDVNSVRYYPSGDAFA 297
Query: 235 -----SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 289
+ C + DR+V I++ + F ++ D +SL+G +L D
Sbjct: 298 SGSDDATCRLYDLRADREVAIYSKESII----FGASSVD-------FSLSGRLLFAGYND 346
Query: 290 NSVSLW 295
++++W
Sbjct: 347 YTINVW 352
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 128 (50.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 52/183 (28%), Positives = 76/183 (41%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C D T++VF ++ G + E+K H
Sbjct: 610 LVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFK-----------AETGEKLLEIKAHE 658
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V A++ +A+CS D+KV IW G + Y+ H VN +
Sbjct: 659 DEVLCCAFSTDD--RFIATCSVDKKVKIWNSMTGGLV--HVYDEHSEQVNCCHFTNNSHY 714
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGS-KL 184
L+LA SSD FL + D N E R + HT N + P L+ G+ KL
Sbjct: 715 LLLATASSD---CFLK-LWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKL 770
Query: 185 GGV 187
V
Sbjct: 771 WDV 773
Score = 57 (25.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K L+S D+ I++W + ++++ L+ H + V+D L + S S D V
Sbjct: 1017 KTLISSSDDSSIQVWNWQSEEYVF---LQAHQETVKDFKL-----LKNSKLLSWSFDGTV 1068
Query: 249 IIWT 252
IW+
Sbjct: 1069 KIWS 1072
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 96 (38.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 42/168 (25%), Positives = 66/168 (39%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + + G YLA+ S D TV+ ++L + H KGH V
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFT-------CKGHRHWVL 160
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG---L 127
++W+ P G LAS + +V++W G H + ++W P
Sbjct: 161 SISWS-PD-GKKLASGCKNGQVLLWDPSTGLQVGR-TLTGHSKWITGLSWEPLHMNPECR 217
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSL 174
+A S DG++ + DT + +I HT + WG G G L
Sbjct: 218 YVASSSKDGSVR----VWDTTAGRCERILTGHTQSVTCLRWG-GDGLL 260
Score = 82 (33.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
++ LVSG D+ +K+W + K T L H+D V V W+P G +AS +D+
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLA--TDLPGHADEVYAVDWSPD-GQR---VASGGKDKC 479
Query: 248 VIIW 251
+ IW
Sbjct: 480 LRIW 483
Score = 72 (30.4 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 26/108 (24%), Positives = 44/108 (40%)
Query: 190 RLV-SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
R+V S D IK+W K++ L H V +AW+ S+ +++ S D +
Sbjct: 385 RIVASASFDKSIKLWDGRTGKYL--ASLRGHVAAVYQIAWSAD---SRLLVSG-SSDSTL 438
Query: 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
+W T + D V+ V WS G + D + +W+
Sbjct: 439 KVWDVKAQKLATDLPGHA--DEVYAVDWSPDGQRVASGGKDKCLRIWR 484
>FB|FBgn0022786 [details] [associations]
symbol:Hira "Hira" species:7227 "Drosophila melanogaster"
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0035041 "sperm chromatin decondensation"
evidence=IMP] [GO:0001673 "male germ cell nucleus" evidence=IDA]
[GO:0035042 "fertilization, exchange of chromosomal proteins"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0003682 GO:GO:0001673
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006336 GO:GO:0035042
KO:K11293 GeneTree:ENSGT00550000074919 CTD:7290 EMBL:AF031081
EMBL:AJ222709 EMBL:AF071881 EMBL:AY069414 EMBL:BT016167 PIR:A59246
RefSeq:NP_572401.2 UniGene:Dm.2141 ProteinModelPortal:O17468
SMR:O17468 IntAct:O17468 STRING:O17468 PaxDb:O17468
EnsemblMetazoa:FBtr0071070 GeneID:31680 KEGG:dme:Dmel_CG12153
FlyBase:FBgn0022786 InParanoid:O17468 OMA:KECKSER OrthoDB:EOG40VT4J
PhylomeDB:O17468 ChiTaRS:HIRA GenomeRNAi:31680 NextBio:774799
Bgee:O17468 GermOnline:CG12153 Uniprot:O17468
Length = 1047
Score = 138 (53.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 64/246 (26%), Positives = 103/246 (41%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ + D +YLA+CS D+TV +++ HS +A LKGH+G V
Sbjct: 127 GHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAF-----PHS-----VATLKGHTGLVK 176
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF------KYYEYNNHDSSVNSIAWAPKE 124
V+W P G LAS S DR + IW + NW + +E + + ++W+P
Sbjct: 177 GVSW-DP-LGRFLASQSDDRSIKIW--NTMNWSLSHTITEPFEECGGTTHILRLSWSPDG 232
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
L+ A + G + + + W+ K H V + I S E D SK
Sbjct: 233 QYLVSAHAMNGGGPT--AQIIEREGWKCDKDFVGHRKAVTCVRFHNSILSRQENDGSPSK 290
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDK-WIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242
L G D + +W + + +L N S + D+ W P +C++ +C
Sbjct: 291 PLQYCC-LAVGSRDRSLSVWMTALQRPMVVIHELFNAS--ILDLTWGPQ----ECLLMAC 343
Query: 243 SQDRKV 248
S D +
Sbjct: 344 SVDGSI 349
Score = 131 (51.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 67/271 (24%), Positives = 113/271 (41%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYY--EYNNHDSSVNSIA 119
L+GH G V +AW+ P LASCS D VIIW + F + H V ++
Sbjct: 125 LRGHDGDVLDLAWS-PN-DVYLASCSIDNTVIIW---DAQAFPHSVATLKGHTGLVKGVS 179
Query: 120 WAPKEFGLILACGSSDGTISFLTYMSDTNSW---ESRKIAAHTIGCNAVSWGP-GIGSLS 175
W P G LA S D +I M+ + S E + T +SW P G +S
Sbjct: 180 WDP--LGRFLASQSDDRSIKIWNTMNWSLSHTITEPFEECGGTTHILRLSWSPDGQYLVS 237
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-----KWIEETKLENHSDWVRDVAWAP 230
+ G GG +++ + WK + D K + + N ++ +P
Sbjct: 238 AHAMNG---GGPTAQIIER------EGWKCDKDFVGHRKAVTCVRFHNSILSRQENDGSP 288
Query: 231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM--NTFDDVVWNVSWSLTGDILTVSCG 288
S L C +A S+DR + +W + P ++ F+ + +++W + L ++C
Sbjct: 289 SKPLQYCCLAVGSRDRSLSVWMT---ALQRPMVVIHELFNASILDLTWG-PQECLLMACS 344
Query: 289 -DNSVSLWKENTDGAWQCITEMGKTSEQRAM 318
D S++ K + + I+E + + R M
Sbjct: 345 VDGSIACLKFTEEELGKAISEEEQNAIIRKM 375
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 133 (51.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 72/298 (24%), Positives = 123/298 (41%)
Query: 10 TGHEDMIHDA---EMDYLGLYLATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKG 64
TGH + + D + D L L + S D T++++ N +RN K H +G
Sbjct: 137 TGHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTERN-KIKALHC--------CRG 187
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRG-DNGNWFKYYEYNNHDSSVNSIA-WAP 122
H+G V +A + T S S+D+ + IW + +Y E ++
Sbjct: 188 HAGSVDSIAVDASR--TKFCSGSWDKMLKIWSAVPSEEEDEYEETSDRPRKKQKTEKMGL 245
Query: 123 KEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS 182
++ G S+ S L SD + +I + + N W G++ L G+
Sbjct: 246 TRIPIVTLSGHSEAVSSVL--WSDVD-----EICSASWDHNIKIWDVETGTVKST-LAGN 297
Query: 183 KL------GGVAKRLVSGGCDNLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPSWGLS 235
K+ +++RL SG D I++W D + L +H+ WV V W+PS
Sbjct: 298 KVFNCISYSPLSQRLASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPS---H 354
Query: 236 KCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
+ + S S D+ V +W + P + + D V +V W+ G IL+ DN +
Sbjct: 355 EQQLVSGSLDKLVKLWDTRSCKA--PLYDLAAHSDKVLSVDWTDAGLILSGG-SDNKL 409
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 133 (51.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 73/294 (24%), Positives = 124/294 (42%)
Query: 11 GHEDMIHDA---EMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
GH D++ D + D L L T S D TV ++ + N++K+ K + +GH+G
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLW--EWNVEKN-----KVKALHCCRGHAG 190
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
V +A G S S+D+ + IW + E + + + N K L
Sbjct: 191 SVDAIAV--DSSGAKFCSGSWDKMLKIW-----STVPTDEEDEMEEATNRPRKKQKTEQL 243
Query: 128 ILACGSSDGTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL-- 184
L + T+S T + W ++ +I + + W G L L G+K+
Sbjct: 244 GLT-RTPLVTLSGHTEAISSVLWSDAEEICSASWDHTIRVWDVESGGLKST-LTGNKVFN 301
Query: 185 ----GGVAKRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
+ KRL SG D I++W + D + L +H+ WV V W+P+ + +
Sbjct: 302 CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT---HEQQL 358
Query: 240 ASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
S S D V +W + P + + +D V +V W+ TG +L+ DN +
Sbjct: 359 ISGSLDNIVKLWDTRSCKA--PLYDLAAHEDKVLSVDWTDTGLLLSGGA-DNKL 409
>CGD|CAL0000383 [details] [associations]
symbol:orf19.4293 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 132 (51.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 61/259 (23%), Positives = 106/259 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + + ++ G YLA+CS D +V ++ D ++ +A L HS V
Sbjct: 135 GHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFE------CVAVLNDHSQDVK 188
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSV-----NSIAWAPK 123
V+W HP +LAS SYD + I++ D W N H+ +V S+
Sbjct: 189 NVSW-HPSMN-ILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFESLKSPIA 246
Query: 124 EFGLI-LACGSSDGTISFLTYMSDTNSWESRKIAAHTI--GCNAVSWG-----PGIGSLS 175
+ ++ L S D ++ + E K+ + N + W P +
Sbjct: 247 DSSVLRLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVLPSVHKYP 306
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ-EGDKWIEETKLEN-HS-DWVRDVAWAPSW 232
+ S L G ++ S G D I ++ + E KW+ ++ E H + V WA
Sbjct: 307 VYSVAWSALTG---KIASAGSDGKIVVYSETEKGKWVIDSIHEGAHGVHEINCVIWAQLD 363
Query: 233 GLSKCMIASCSQDRKVIIW 251
++ ++ S D V +W
Sbjct: 364 DENEILV-SAGDDGYVNLW 381
Score = 114 (45.2 bits), Expect = 0.00068, P = 0.00068
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV 257
N +I ++W +E H + V+ V W +ASCS+D+ V IW + D
Sbjct: 115 NQKEILTSPNNEWNLMAIIEGHENEVKAV----DWNFQGQYLASCSRDKSVWIWET-DPE 169
Query: 258 TWTPF----IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG-AWQCI 306
T F ++N V NVSW + +IL S D+++ +++++ G W C+
Sbjct: 170 TLEEFECVAVLNDHSQDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCV 223
>UNIPROTKB|Q5AG86 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 132 (51.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 61/259 (23%), Positives = 106/259 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHE+ + + ++ G YLA+CS D +V ++ D ++ +A L HS V
Sbjct: 135 GHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFE------CVAVLNDHSQDVK 188
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSV-----NSIAWAPK 123
V+W HP +LAS SYD + I++ D W N H+ +V S+
Sbjct: 189 NVSW-HPSMN-ILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFESLKSPIA 246
Query: 124 EFGLI-LACGSSDGTISFLTYMSDTNSWESRKIAAHTI--GCNAVSWG-----PGIGSLS 175
+ ++ L S D ++ + E K+ + N + W P +
Sbjct: 247 DSSVLRLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVLPSVHKYP 306
Query: 176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ-EGDKWIEETKLEN-HS-DWVRDVAWAPSW 232
+ S L G ++ S G D I ++ + E KW+ ++ E H + V WA
Sbjct: 307 VYSVAWSALTG---KIASAGSDGKIVVYSETEKGKWVIDSIHEGAHGVHEINCVIWAQLD 363
Query: 233 GLSKCMIASCSQDRKVIIW 251
++ ++ S D V +W
Sbjct: 364 DENEILV-SAGDDGYVNLW 381
Score = 114 (45.2 bits), Expect = 0.00068, P = 0.00068
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV 257
N +I ++W +E H + V+ V W +ASCS+D+ V IW + D
Sbjct: 115 NQKEILTSPNNEWNLMAIIEGHENEVKAV----DWNFQGQYLASCSRDKSVWIWET-DPE 169
Query: 258 TWTPF----IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG-AWQCI 306
T F ++N V NVSW + +IL S D+++ +++++ G W C+
Sbjct: 170 TLEEFECVAVLNDHSQDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCV 223
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 93 (37.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
LKGH V + W + + S S D KVI+W N K + + V + A+A
Sbjct: 101 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN--KEHAVTMPCTWVMACAYA 156
Query: 122 PKEFGLILACGSSDGTISF--LTYMSDTNSWESRK-IAAHTIGCNAVSW 167
P G +ACG D S LT+ + N +K +A HT +A S+
Sbjct: 157 PS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 203
Score = 82 (33.9 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 30/126 (23%), Positives = 52/126 (41%)
Query: 177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-- 234
LDL S+ G VSGGCD +W + ++ E H + V + PS
Sbjct: 243 LDLAPSETGNT---FVSGGCDKKAMVWDMRSGQCVQA--FETHESDINSVRYYPSGDAFA 297
Query: 235 -----SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 289
+ C + DR+V I++ + F ++ D +SL+G +L D
Sbjct: 298 SGSDDATCRLYDLRADREVAIYSKESII----FGASSVD-------FSLSGRLLFAGYND 346
Query: 290 NSVSLW 295
++++W
Sbjct: 347 YTINVW 352
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 96 (38.9 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L + D IK+W +++ L H+ WVR ++P L I SCS+D+ + I
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYS--LYRHTHWVRCAKFSPDGRL----IVSCSEDKTIKI 170
Query: 251 W-TSNDYVTWTPFIMNTFDDVVW--N-VSWSLTGDILTVSCGDNSVSLW 295
W T+N +N F D V N V ++ +G + + D +V +W
Sbjct: 171 WDTTNKQC------VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 88 (36.0 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+D++ + G LA+ S D TV+++ D+ K +E K H+ PV
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK-----------FSEFKAHTAPVR 106
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V ++ G LA+ S D+ + +W F Y Y H V ++P + LI++
Sbjct: 107 SVDFSAD--GQFLATASEDKSIKVWSMYRQR-FLYSLYR-HTHWVRCAKFSP-DGRLIVS 161
Query: 131 C 131
C
Sbjct: 162 C 162
Score = 80 (33.2 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I ++ G LAT S D + ++N H++ + GH V
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFK-------PHARAYRYV----GHKDVVT 64
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118
V ++ P G LLAS S DR V +W D K+ E+ H + V S+
Sbjct: 65 SVQFS-PH-GNLLASASRDRTVRLWIPDKRG--KFSEFKAHTAPVRSV 108
Score = 79 (32.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S G D +K+W +K ++ ++ HS V +++ PS ++ + S I+
Sbjct: 201 IASAGSDQTVKVWDVRVNKLLQHYQV--HSGGVNCISFHPS---DNYLVTASSDGTLKIL 255
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
+ +T + V+ VS+S G++ D V LW+ N D
Sbjct: 256 DLLEGRLIYT---LQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFD 302
Score = 73 (30.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
KGH + + + P G LA+ S+D +++W + Y Y H V S+ ++P
Sbjct: 15 KGHKAAITSLDLS-PN-GKQLATASWDTFLMLWNFKPHA--RAYRYVGHKDVVTSVQFSP 70
Query: 123 KEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167
G +LA S D T+ ++ D S + AHT +V +
Sbjct: 71 H--GNLLASASRDRTVRL--WIPDKRGKFS-EFKAHTAPVRSVDF 110
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 132 (51.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 77/303 (25%), Positives = 119/303 (39%)
Query: 11 GHEDMIHDA---EMDYLGLYLATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKGH 65
GH D++ D + D L L T S D TV ++ N +RN K H +GH
Sbjct: 138 GHADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWNSERN-KVKARHC--------CRGH 188
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRG-DNGNWFKYYEYNNHDSSVNSIAWAPKE 124
+G V +A P T S S+D+ + IW + E N +
Sbjct: 189 AGSVDTIA-VDPT-RTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTEQMGLTR 246
Query: 125 FGLILACGSSDGTISFLTYMSD---TNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
L+ G ++ S L +D + SW+ HTI W G + L G
Sbjct: 247 TPLMTLSGHNEAVSSVLWMDADELCSASWD------HTIRL----WDAETGG-QKSTLSG 295
Query: 182 SKL------GGVAKRLVSGGCDNLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPSWGL 234
SK+ + +RL SG D +++W D + L +H+ WV V WAPS
Sbjct: 296 SKVFNCISYSPLCRRLASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPS--- 352
Query: 235 SKCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVS 293
+ + S S D V +W + P + + +D V W+ G IL+ DN +
Sbjct: 353 HEHQLVSGSLDNVVKLWDTRSCKA--PLYDLAAHEDKVLCADWTENGLILSGGA-DNKLY 409
Query: 294 LWK 296
++
Sbjct: 410 TYR 412
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 132 (51.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 75/296 (25%), Positives = 118/296 (39%)
Query: 11 GHEDMIHDA---EMDYLGLYLATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKGH 65
GH D++ D + D L L + S D T+ ++ N++RN K H +GH
Sbjct: 138 GHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERN-KVKALHC--------CRGH 188
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRG-DNGNWFKYYEYNNHDSSVNSIAWAPKE 124
+G V +A GT S S+D+ + IW + E N
Sbjct: 189 AGSVDSIAV--DSTGTKFCSGSWDKMLKIWSAVPTDEEDELEEPTNRPRKKQKTEQLGLT 246
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
I+ IS + + SD S HTI W GSL L G+K+
Sbjct: 247 RTPIVTLSGHKEAISSVLW-SDAEEICSASWD-HTIRV----WDVESGSLKST-LTGNKV 299
Query: 185 ------GGVAKRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237
+ KRL SG D I++W + D + L +H+ WV + W+P+ +
Sbjct: 300 FNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPT---HEQ 356
Query: 238 MIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
+ S S D V +W + P + + +D V +V W+ TG +L+ DN +
Sbjct: 357 QLISGSLDNIVKLWDTRSCKA--PLYDLAAHEDKVLSVDWTDTGLLLSGGA-DNKL 409
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 108 (43.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 33/99 (33%), Positives = 47/99 (47%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+GH ++ + WA LL S S D K+I+W D K + S V + A+A
Sbjct: 51 LRGHLAKIYAMHWATDS--KLLVSASQDGKLIVW--DTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 122 PKEFGLILACGSSDGTISFLTYMS-DTNSWESRKIAAHT 159
P G +ACG D S S + N SR+++AHT
Sbjct: 107 PS--GNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHT 143
Score = 63 (27.2 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 189 KRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
K +SG CD K+W +EG +T + SD + + + P+ G + C + S D
Sbjct: 197 KLFISGACDASAKLWDVREGT--CRQTFTGHESD-INAICFFPN-GEAIC---TGSDDAS 249
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
++ T + + + +V++SL+G +L D + ++W
Sbjct: 250 CRLFDLRADQELTAYSQESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
Score = 46 (21.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 171 IGSLSELDLKGSKLGGVAKRLV--SGGCDNLIKIW 203
+G LS D + S LG A + +G D+ +KIW
Sbjct: 305 VGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
>ASPGD|ASPL0000037495 [details] [associations]
symbol:cdhA species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008054 "cyclin catabolic
process" evidence=IMP] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0030996 "cell cycle arrest in response to nitrogen starvation"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
HOGENOM:HOG000195514 KO:K03364 OrthoDB:EOG43FM5B OMA:PMATANL
RefSeq:XP_660569.1 ProteinModelPortal:Q5B915 STRING:Q5B915
EnsemblFungi:CADANIAT00010116 GeneID:2874026 KEGG:ani:AN2965.2
Uniprot:Q5B915
Length = 592
Score = 117 (46.2 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 33/109 (30%), Positives = 56/109 (51%)
Query: 33 SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV 92
+DH + + DR++ D S L L GH V + W + + G L AS D K+
Sbjct: 378 NDHILTSGSRDRHIFHRDVRSPDQYL-RRLSGHKQEVCGLRW-NTEDGQL-ASGGNDNKL 434
Query: 93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACG-SSDGTISF 140
++W D N Y +++H ++V +I W+P + L+ + G ++D TI F
Sbjct: 435 LVW--DKLNETPLYRFSDHTAAVKAITWSPHQHHLLASGGGTADRTIKF 481
Score = 60 (26.2 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 27/109 (24%), Positives = 47/109 (43%)
Query: 191 LVSGG--CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR-K 247
L SGG D IK W I+E ++ S V ++AW+ + S +I++ + +
Sbjct: 468 LASGGGTADRTIKFWNTATGSLIKE--VDTGSQ-VCNLAWSKN---SDEIISTHGYSQNQ 521
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
++IW +TF V ++ S G + GD ++ WK
Sbjct: 522 IVIWKYPRMEQIVSLTGHTFR--VLYLAMSPDGQTVVTGAGDETLRFWK 568
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 110 (43.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 53 SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHD 112
+Q+G + GH GPV ++++ P G LAS D+++ +W +G FK E H
Sbjct: 9 AQQGNSVRLFTGHRGPVLSLSFS-PN-GKYLASAGEDQRLKLWDLASGTLFK--ELRGHT 64
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTI 138
S+ S+A++P + GLI A S D ++
Sbjct: 65 DSITSLAFSP-DSGLI-ASASMDNSV 88
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 96 (38.9 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L + D IK+W +++ L H+ WVR ++P L I SCS+D+ + I
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYS--LYRHTHWVRCAKFSPDGRL----IVSCSEDKTIKI 170
Query: 251 W-TSNDYVTWTPFIMNTFDDVVW--N-VSWSLTGDILTVSCGDNSVSLW 295
W T+N +N F D V N V ++ +G + + D +V +W
Sbjct: 171 WDTTNKQC------VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 88 (36.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+D++ + G LA+ S D TV+++ D+ K +E K H+ PV
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK-----------FSEFKAHTAPVR 106
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V ++ G LA+ S D+ + +W F Y Y H V ++P + LI++
Sbjct: 107 SVDFSAD--GQFLATASEDKSIKVWSMYRQR-FLYSLYR-HTHWVRCAKFSP-DGRLIVS 161
Query: 131 C 131
C
Sbjct: 162 C 162
Score = 80 (33.2 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ I ++ G LAT S D + ++N H++ + GH V
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFK-------PHARAYRYV----GHKDVVT 64
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118
V ++ P G LLAS S DR V +W D K+ E+ H + V S+
Sbjct: 65 SVQFS-PH-GNLLASASRDRTVRLWIPDKRG--KFSEFKAHTAPVRSV 108
Score = 80 (33.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S G D +K+W +K ++ ++ HS V +++ PS +I + S I+
Sbjct: 201 IASAGSDQTVKVWDVRVNKLLQHYQV--HSGGVNCISFHPS---GNYLITASSDGTLKIL 255
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
+ +T + V+ VS+S G++ D V LW+ N D
Sbjct: 256 DLLEGRLIYT---LQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFD 302
Score = 73 (30.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
KGH + + + P G LA+ S+D +++W + Y Y H V S+ ++P
Sbjct: 15 KGHKAAITSLDLS-PN-GKQLATASWDTFLMLWNFKPHA--RAYRYVGHKDVVTSVQFSP 70
Query: 123 KEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167
G +LA S D T+ ++ D S + AHT +V +
Sbjct: 71 H--GNLLASASRDRTVRL--WIPDKRGKFS-EFKAHTAPVRSVDF 110
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 110 (43.8 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 189 KRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
K +V+G D I+IW + D+ T L H+ VR + +P S+ M+ASCS D
Sbjct: 204 KEVVTGSVDKTIRIWDIRYPDR--PTTILRGHTYAVRRIKCSPH---SESMLASCSYDMS 258
Query: 248 VIIWTSNDYVTWTPFI--MNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGAWQ 304
VI+W P I M+ + V + W++ D SC D V +W G ++
Sbjct: 259 VIVWDRAR--EQDPIIARMDHHTEFVVGLDWNMFIDGQMASCSWDEQVCVWNLGRPGQFR 316
Score = 59 (25.8 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 30/111 (27%), Positives = 47/111 (42%)
Query: 30 TCSSDHTVKVFN--LDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87
T S D ++K++N +DR+LK + H ++ W+ P+ L AS S
Sbjct: 122 TGSWDQSIKIWNPRMDRSLKT-------------FREHRYCIYSAIWS-PRNAHLFASVS 167
Query: 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138
DR + IW D+ + HD + + W K + GS D TI
Sbjct: 168 GDRTLKIW--DSRDNRSLNTIKAHDHEILTCDWN-KYNDKEVVTGSVDKTI 215
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 129 (50.5 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+ +H + G LA+ S D T +++N++ + HS+ L ELKGH+ V
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPH-----GHSKAKDL--ELKGHTDSVD 70
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
Q+ W P+ L+A+ S D+ V +W +G + E + + +N I + P G +A
Sbjct: 71 QLCW-DPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGEN--IN-ITYKPD--GTHVA 124
Query: 131 CGSSDGTISFL 141
G+ D ++ L
Sbjct: 125 VGNRDDELTIL 135
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 131 (51.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 61/213 (28%), Positives = 89/213 (41%)
Query: 43 DRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW 102
D ++K D Q I + GH V VA+ P G + S S DR + +W G
Sbjct: 171 DLSIKLWD-FQQSYECIKTMHGHDHNVSSVAFV-PA-GDYVLSASRDRTIKMWEVATGYC 227
Query: 103 FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS-FLTYMSDTNSWESRKIAAHTIG 161
K Y H V + + G I A S+D TI +LT D E R HT+
Sbjct: 228 VK--TYTGHREWVRMVRVHIE--GSIFATCSNDQTIRVWLTNSKDCKV-ELRD-HEHTVE 281
Query: 162 CNAVSWGP--GIGSLSELDLKGSKLGG-VAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN 218
C ++W P +++E +K G L SG D I+IW + L
Sbjct: 282 C--IAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCL--LTLSG 337
Query: 219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
H +WVR +A+ P K ++ S S D+ + +W
Sbjct: 338 HDNWVRGLAFHPG---GKYLV-SASDDKTIRVW 366
>UNIPROTKB|E1BEP7 [details] [associations]
symbol:ELP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046425 "regulation of JAK-STAT cascade" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046425 CTD:55250 GeneTree:ENSGT00390000000916 KO:K11374
OMA:DCLIRIW EMBL:DAAA02056390 IPI:IPI00707133 RefSeq:NP_001137336.1
UniGene:Bt.1205 ProteinModelPortal:E1BEP7
Ensembl:ENSBTAT00000025227 GeneID:511041 KEGG:bta:511041
NextBio:20869740 Uniprot:E1BEP7
Length = 827
Score = 135 (52.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 58/220 (26%), Positives = 96/220 (43%)
Query: 54 QKGTLIAELKGHSGPVWQVAWAHPQFG---TLLASCSYDRKVIIWRGDNGNWFKYYEYNN 110
QK +I L GH+ V + W Q G T L S D +VI W +N + +
Sbjct: 46 QKRVVITNLNGHTARVNCLQWICKQDGSPSTELVSGGSDNQVIHWEIENNQLLQAVHVSG 105
Query: 111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG 170
H+ V ++ + +A G + T+ ++ SD+ K + +++G G
Sbjct: 106 HEGPVYAVHAVYQR----MAPGIALHTL-IVSAASDSTVRVWSKQGSEVTCLQTLNFGNG 160
Query: 171 IGSLSELDLKGSKLGGVAKRLVSGGCDNL-IKIWKQEGDKWIEETKLENHSDWVRDVAWA 229
L L S L + +++ G D+ I ++ Q+ +++ + L H DW+R V WA
Sbjct: 161 FA----LALCLSFLPNIDVPVLACGDDDCKIHLFVQQNNQFQKMLFLSGHEDWIRGVEWA 216
Query: 230 PSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD 269
++G +ASCSQD + IW YV T DD
Sbjct: 217 -AFGRD-LFLASCSQDCLIRIWRL--YVKSTSLETQEDDD 252
>MGI|MGI:1889642 [details] [associations]
symbol:Elp2 "elongator acetyltransferase complex subunit 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008023
"transcription elongation factor complex" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0033588 "Elongator
holoenzyme complex" evidence=ISO] [GO:0046425 "regulation of
JAK-STAT cascade" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1889642 GO:GO:0005794
GO:GO:0019901 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000502 GO:GO:0061133
GO:GO:0043248 GO:GO:0006368 GO:GO:0008023 GO:GO:0046425
GO:GO:0033588 CTD:55250 GeneTree:ENSGT00390000000916
HOGENOM:HOG000200623 HOVERGEN:HBG087208 KO:K11374 OrthoDB:EOG40K7Z8
OMA:DCLIRIW EMBL:AF291064 EMBL:AK033246 EMBL:AK034457 EMBL:AK050960
EMBL:AK147826 EMBL:AK167725 EMBL:AK167853 EMBL:AK168370
EMBL:BC015284 EMBL:BC051943 IPI:IPI00461189 IPI:IPI00653141
RefSeq:NP_067423.2 UniGene:Mm.25298 ProteinModelPortal:Q91WG4
SMR:Q91WG4 STRING:Q91WG4 PhosphoSite:Q91WG4 PaxDb:Q91WG4
PRIDE:Q91WG4 Ensembl:ENSMUST00000025120 GeneID:58523 KEGG:mmu:58523
UCSC:uc008egx.1 UCSC:uc012baj.1 InParanoid:Q91WG4 NextBio:314342
Bgee:Q91WG4 CleanEx:MM_ELP2 Genevestigator:Q91WG4
GermOnline:ENSMUSG00000024271 Uniprot:Q91WG4
Length = 831
Score = 135 (52.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 55/202 (27%), Positives = 88/202 (43%)
Query: 54 QKGTLIAELKGHSGPVWQVAWAHPQFGTL---LASCSYDRKVIIWRGDNGNWFKYYEYNN 110
QK +I L GH+ V + W + G+ L S D +VI W +N K
Sbjct: 46 QKKVVITNLNGHTARVNCLQWIRTEDGSPSNELVSGGSDNRVIHWELENNQVLKSVRLQG 105
Query: 111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG 170
H+ V ++ A + G + G I+ S W S+K + +S+ G
Sbjct: 106 HEGPVCAVH-AIYQSGP--SEGEQHALIASAASDSTVRIW-SKK-GSEVKYLQTLSFRDG 160
Query: 171 -IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWA 229
+ S+ L G+ + +A G D I ++ Q+ D++ + L H DW+R V WA
Sbjct: 161 FVLSVCLAILPGTNVPVLA----CGDDDCRIHLYIQQDDQFQKALSLCGHEDWIRGVEWA 216
Query: 230 PSWGLSKCMIASCSQDRKVIIW 251
++G +ASCSQD + IW
Sbjct: 217 -TFGRD-LFLASCSQDCLIRIW 236
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 109 (43.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+GH ++ + WA LL S S D K+I+W D K + S V + A+A
Sbjct: 51 LRGHLAKIYAMHWATDS--KLLVSASQDGKLIVW--DTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 122 PKEFGLILACGSSDGTISFLTYMS-DTNSWESRKIAAHT 159
P G +ACG D S + S + N SR+++AHT
Sbjct: 107 PS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT 143
Score = 61 (26.5 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 189 KRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
K +SG CD K+W +EG +T + SD + + + P+ G + C + S D
Sbjct: 197 KLFISGACDASAKLWDVREGT--CRQTFTGHESD-INAICFFPN-GEAIC---TGSDDAS 249
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
++ T + + + +V++SL+G +L D + ++W
Sbjct: 250 CRLFDLRADQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIW 297
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 168 GPGIGSLSELDLKGSKLGGVAKRLV--SGGCDNLIKIW 203
G +G LS D + S LG A + +G D+ +K+W
Sbjct: 302 GERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVW 339
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 109 (43.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+GH ++ + WA LL S S D K+I+W D K + S V + A+A
Sbjct: 51 LRGHLAKIYAMHWATDS--KLLVSASQDGKLIVW--DTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 122 PKEFGLILACGSSDGTISFLTYMS-DTNSWESRKIAAHT 159
P G +ACG D S + S + N SR+++AHT
Sbjct: 107 PS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT 143
Score = 61 (26.5 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 189 KRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
K +SG CD K+W +EG +T + SD + + + P+ G + C + S D
Sbjct: 197 KLFISGACDASAKLWDVREGT--CRQTFTGHESD-INAICFFPN-GEAIC---TGSDDAS 249
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
++ T + + + +V++SL+G +L D + ++W
Sbjct: 250 CRLFDLRADQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIW 297
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 168 GPGIGSLSELDLKGSKLGGVAKRLV--SGGCDNLIKIW 203
G +G LS D + S LG A + +G D+ +K+W
Sbjct: 302 GERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVW 339
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 109 (43.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+GH ++ + WA LL S S D K+I+W D K + S V + A+A
Sbjct: 51 LRGHLAKIYAMHWATDS--KLLVSASQDGKLIVW--DTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 122 PKEFGLILACGSSDGTISFLTYMS-DTNSWESRKIAAHT 159
P G +ACG D S + S + N SR+++AHT
Sbjct: 107 PS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT 143
Score = 61 (26.5 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 189 KRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
K +SG CD K+W +EG +T + SD + + + P+ G + C + S D
Sbjct: 197 KLFISGACDASAKLWDVREGT--CRQTFTGHESD-INAICFFPN-GEAIC---TGSDDAS 249
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
++ T + + + +V++SL+G +L D + ++W
Sbjct: 250 CRLFDLRADQELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
Score = 46 (21.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 171 IGSLSELDLKGSKLGGVAKRLV--SGGCDNLIKIW 203
+G LS D + S LG A + +G D+ +KIW
Sbjct: 305 VGVLSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 109 (43.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+GH ++ + WA LL S S D K+I+W D K + S V + A+A
Sbjct: 51 LRGHLAKIYAMHWATDS--KLLVSASQDGKLIVW--DTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 122 PKEFGLILACGSSDGTISFLTYMS-DTNSWESRKIAAHT 159
P G +ACG D S + S + N SR+++AHT
Sbjct: 107 PS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT 143
Score = 61 (26.5 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 24/108 (22%), Positives = 50/108 (46%)
Query: 189 KRLVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
K +SG CD K+W +EG +T + SD + + + P+ G + C + + R
Sbjct: 197 KLFISGACDASAKLWDVREGT--CRQTFTGHESD-INAICFFPN-GEAICTGSDDASCRL 252
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+ + T++ + + +V++SL+G +L D + ++W
Sbjct: 253 FDLRADQELTTYSH---ESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 37/132 (28%), Positives = 65/132 (49%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G LA+CS D T+K++++ K+D+ + +L+ H+ ++
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM----KQDNC-------VHDLQAHNKEIY 395
Query: 71 QVAWA-------HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
+ W+ +P +LAS S+D V +W D G + H V S+A++P
Sbjct: 396 TIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRG--ICIHTLTKHQEPVYSVAFSPD 453
Query: 124 EFGLILACGSSD 135
G LA GS D
Sbjct: 454 --GRYLASGSFD 463
Score = 90 (36.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 43/162 (26%), Positives = 65/162 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL N + I E G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIRE-GGQDVPSN 225
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K+
Sbjct: 226 KDVTSLDWNSE--GTLLATGSYDGFARIWTKD-GNLAS--TLGQHKGPIFALKWN-KKGN 279
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 280 FILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 316
Score = 87 (35.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW-GLSK----CMIASCSQD 245
L S D +KIW + D + + L+ H+ + + W+P+ G + M+AS S D
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHD--LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFD 421
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
V +W + + + + V++V++S G L D V +W T GA
Sbjct: 422 STVRLWDVDRGICI--HTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT-GA 475
Score = 81 (33.6 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W + D+ I L H + V VA++P G +AS S D+ V I
Sbjct: 415 LASASFDSTVRLW--DVDRGICIHTLTKHQEPVYSVAFSPD-GR---YLASGSFDKCVHI 468
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T T +++++ ++ V W+ GD + S D SV
Sbjct: 469 WN-----TQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 71 (30.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SND 255
D I + K D+ I+ + H++ V + W P+ L +ASCS D + IW+ D
Sbjct: 328 DMCIHVCKLGQDRPIKT--FQGHTNEVNAIKWDPTGNL----LASCSDDMTLKIWSMKQD 381
Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTG--------DILTVSCG-DNSVSLW 295
+ + ++ + WS TG +++ S D++V LW
Sbjct: 382 NCVHD---LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 37/132 (28%), Positives = 65/132 (49%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G LA+CS D T+K++++ K+D+ + +L+ H+ ++
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM----KQDNC-------VHDLQAHNKEIY 395
Query: 71 QVAWA-------HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
+ W+ +P +LAS S+D V +W D G + H V S+A++P
Sbjct: 396 TIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRG--ICIHTLTKHQEPVYSVAFSPD 453
Query: 124 EFGLILACGSSD 135
G LA GS D
Sbjct: 454 --GRYLASGSFD 463
Score = 90 (36.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 43/162 (26%), Positives = 65/162 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL N + I E G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIRE-GGQDVPSN 225
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K+
Sbjct: 226 KDVTSLDWNSE--GTLLATGSYDGFARIWTKD-GNLAS--TLGQHKGPIFALKWN-KKGN 279
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 280 FILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 316
Score = 87 (35.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW-GLSK----CMIASCSQD 245
L S D +KIW + D + + L+ H+ + + W+P+ G + M+AS S D
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHD--LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFD 421
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
V +W + + + + V++V++S G L D V +W T GA
Sbjct: 422 STVRLWDVDRGICI--HTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT-GA 475
Score = 81 (33.6 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W + D+ I L H + V VA++P G +AS S D+ V I
Sbjct: 415 LASASFDSTVRLW--DVDRGICIHTLTKHQEPVYSVAFSPD-GR---YLASGSFDKCVHI 468
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T T +++++ ++ V W+ GD + S D SV
Sbjct: 469 WN-----TQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 71 (30.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SND 255
D I + K D+ I+ + H++ V + W P+ L +ASCS D + IW+ D
Sbjct: 328 DMCIHVCKLGQDRPIKT--FQGHTNEVNAIKWDPTGNL----LASCSDDMTLKIWSMKQD 381
Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTG--------DILTVSCG-DNSVSLW 295
+ + ++ + WS TG +++ S D++V LW
Sbjct: 382 NCVHD---LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 99 (39.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 33/117 (28%), Positives = 54/117 (46%)
Query: 185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
G +RLVSG D + +W+ K ++ +L H V V ++P K IAS S
Sbjct: 326 GDSPERLVSGSDDFTMFLWEPSVSKQPKK-RLTGHQQLVNHVYFSPD---GK-WIASASF 380
Query: 245 DRKVIIWT--SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
D+ V +W + +VT + V+ VSWS +L D+++ +W+ T
Sbjct: 381 DKSVRLWNGITGQFVT----VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRT 433
Score = 76 (31.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/172 (22%), Positives = 64/172 (37%)
Query: 2 VSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE 61
V++ + GH + + G LA+ S D TV++++L +++ T +
Sbjct: 98 VNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL---------YTE--TPLFT 146
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
KGH V VAW+ P G L S S ++ W G + H + I+W
Sbjct: 147 CKGHKNWVLTVAWS-PD-GKHLVSGSKSGEICCWNPKKGE-LEGSPLTGHKKWITGISWE 203
Query: 122 PKEFG-----LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG 168
P + + D I +T ++ HT+ V WG
Sbjct: 204 PVHLSSPCRRFVTSSKDGDARIWDITLKKSIIC-----LSGHTLAVTCVKWG 250
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 95 (38.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 39/168 (23%), Positives = 66/168 (39%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + + G YLA+ S D TV+ ++L + H +GH V
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFT-------CQGHRHWVL 111
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG---L 127
++W+ P TL + C + ++++W G H + ++W P
Sbjct: 112 SISWS-PDGKTLASGCK-NGQILLWDPSTGKQVGRV-LAGHSKWITGLSWEPLHANPECR 168
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSL 174
+A S DG++ + DT + +I HT + WG G G L
Sbjct: 169 YMASSSKDGSVR----VWDTTAGRCERILTGHTQSVTCLRWG-GDGLL 211
Score = 79 (32.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
++ LVSG D+ +K+W + K + L H+D V V W+P G +AS +D+
Sbjct: 377 SRLLVSGSSDSTLKVWDVKAQKLAAD--LPGHADEVYAVDWSPD-GQR---VASGGKDKC 430
Query: 248 VIIW 251
+ IW
Sbjct: 431 LRIW 434
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/106 (21%), Positives = 41/106 (38%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S D IK+W K++ L H V +AW+ S+ +++ S D + +
Sbjct: 338 IASASFDKSIKLWDGRTGKYL--ASLRGHVAAVYQIAWSAD---SRLLVSG-SSDSTLKV 391
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
W + D V+ V WS G + D + +W+
Sbjct: 392 WDVKAQKLAADLPGHA--DEVYAVDWSPDGQRVASGGKDKCLRIWR 435
>DICTYBASE|DDB_G0277941 [details] [associations]
symbol:DDB_G0277941 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0277941 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000023 eggNOG:COG2319
KO:K11293 RefSeq:XP_642022.1 ProteinModelPortal:Q54Z30
EnsemblProtists:DDB0233324 GeneID:8621233 KEGG:ddi:DDB_G0277941
InParanoid:Q54Z30 OMA:TWDPMGK Uniprot:Q54Z30
Length = 476
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/155 (29%), Positives = 65/155 (41%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
++ H I+ + G YLA+ S D V+ L + + + T I LKGHS
Sbjct: 73 INYAHSKSINSIKWSKDGRYLASVSDDRECIVWTLSPF--QSANTPEIWTSIVCLKGHSA 130
Query: 68 PVWQVAW-AHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
+ V W A QF LA+CS D+ ++IW K E + +N I W P G
Sbjct: 131 DITDVIWSADNQF---LATCSLDKTILIWETTKFGIIKKLE--KQEKFINGITWDP--MG 183
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG 161
L SDG I +T +W K+ +G
Sbjct: 184 KYLV-SQSDGLICIW----NTINWNCEKVIKDVVG 213
Score = 85 (35.0 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD 269
W L+ HS + DV W+ +A+CS D+ ++IW + + + +
Sbjct: 119 WTSIVCLKGHSADITDVIWSAD----NQFLATCSLDKTILIWETTKFGIIKK--LEKQEK 172
Query: 270 VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
+ ++W G L VS D + +W NT W C
Sbjct: 173 FINGITWDPMGKYL-VSQSDGLICIW--NTIN-WNC 204
Score = 84 (34.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 25 GLYLATCSSDHTVKVFNL----DRNLKKD-DSHSQKGT------LIAELK-GHSGPVWQV 72
G LATC D +K++N+ D ++ D D S K T L+ + HS + +
Sbjct: 25 GKRLATCGGDSNIKIWNIEPISDEIMEDDADDTSNKRTTTPTPKLLYSINYAHSKSINSI 84
Query: 73 AWAHPQFGTLLASCSYDRKVIIW 95
W+ G LAS S DR+ I+W
Sbjct: 85 KWSKD--GRYLASVSDDRECIVW 105
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 35/139 (25%), Positives = 60/139 (43%)
Query: 2 VSQLNLVDTGHEDMIHDAEM--DYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI 59
+S +++ GH D + D + + S D + V+N++ DD + GT
Sbjct: 10 ISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINT----DDDSGEIGTAK 65
Query: 60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIA 119
L GHS + V+ + G S S+D V +W G + + H S V S++
Sbjct: 66 KSLTGHSQAINDVSISSD--GLFALSGSWDHSVRLWDLSLGETIR--SFIGHTSDVFSVS 121
Query: 120 WAPKEFGLILACGSSDGTI 138
++P ++ A S D TI
Sbjct: 122 FSPDNRQIVSA--SRDKTI 138
Score = 85 (35.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
+++VS D IK+W T + H+DW+ V ++PS ++ +I SC D+ V
Sbjct: 127 RQIVSASRDKTIKLWNTLAQCKYTITD-QQHTDWITCVRFSPS--PNQAIIVSCGWDKLV 183
Query: 249 IIW 251
+W
Sbjct: 184 KVW 186
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 35/139 (25%), Positives = 60/139 (43%)
Query: 2 VSQLNLVDTGHEDMIHDAEM--DYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI 59
+S +++ GH D + D + + S D + V+N++ DD + GT
Sbjct: 10 ISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINT----DDDSGEIGTAK 65
Query: 60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIA 119
L GHS + V+ + G S S+D V +W G + + H S V S++
Sbjct: 66 KSLTGHSQAINDVSISSD--GLFALSGSWDHSVRLWDLSLGETIR--SFIGHTSDVFSVS 121
Query: 120 WAPKEFGLILACGSSDGTI 138
++P ++ A S D TI
Sbjct: 122 FSPDNRQIVSA--SRDKTI 138
Score = 85 (35.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
+++VS D IK+W T + H+DW+ V ++PS ++ +I SC D+ V
Sbjct: 127 RQIVSASRDKTIKLWNTLAQCKYTITD-QQHTDWITCVRFSPS--PNQAIIVSCGWDKLV 183
Query: 249 IIW 251
+W
Sbjct: 184 KVW 186
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 37/132 (28%), Positives = 65/132 (49%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G LA+CS D T+K++++ K+D+ + +L+ H+ ++
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM----KQDNC-------VHDLQAHNKEIY 395
Query: 71 QVAWA-------HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
+ W+ +P +LAS S+D V +W D G + H V S+A++P
Sbjct: 396 TIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRG--ICIHTLTKHQEPVYSVAFSPD 453
Query: 124 EFGLILACGSSD 135
G LA GS D
Sbjct: 454 --GRYLASGSFD 463
Score = 89 (36.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 43/162 (26%), Positives = 65/162 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL N + I E G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIRE-GGQDVPSN 225
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K+
Sbjct: 226 KDVTSLDWNSE--GTLLATGSYDGFARIWTKD-GNLAS--TLGQHKGPIFALKWN-KKGN 279
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 280 FILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 316
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW-GLSK----CMIASCSQD 245
L S D +KIW + D + + L+ H+ + + W+P+ G + M+AS S D
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHD--LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFD 421
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
V +W + + + + V++V++S G L D V +W T GA
Sbjct: 422 STVRLWDVDRGICI--HTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT-GA 475
Score = 81 (33.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W + D+ I L H + V VA++P G +AS S D+ V I
Sbjct: 415 LASASFDSTVRLW--DVDRGICIHTLTKHQEPVYSVAFSPD-GR---YLASGSFDKCVHI 468
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T T +++++ ++ V W+ GD + S D SV
Sbjct: 469 WN-----TQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 71 (30.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SND 255
D I + K D+ I+ + H++ V + W P+ L +ASCS D + IW+ D
Sbjct: 328 DMCIHVCKLGQDRPIKT--FQGHTNEVNAIKWDPTGNL----LASCSDDMTLKIWSMKQD 381
Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTG--------DILTVSCG-DNSVSLW 295
+ + ++ + WS TG +++ S D++V LW
Sbjct: 382 NCVHD---LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 37/132 (28%), Positives = 65/132 (49%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G LA+CS D T+K++++ K+D+ + +L+ H+ ++
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM----KQDNC-------VHDLQAHNKEIY 395
Query: 71 QVAWA-------HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
+ W+ +P +LAS S+D V +W D G + H V S+A++P
Sbjct: 396 TIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRG--ICIHTLTKHQEPVYSVAFSPD 453
Query: 124 EFGLILACGSSD 135
G LA GS D
Sbjct: 454 --GRYLASGSFD 463
Score = 89 (36.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 43/162 (26%), Positives = 65/162 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL N + I E G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIRE-GGQDVPSN 225
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K+
Sbjct: 226 KDVTSLDWNSE--GTLLATGSYDGFARIWTKD-GNLAS--TLGQHKGPIFALKWN-KKGN 279
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 280 FILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 316
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW-GLSK----CMIASCSQD 245
L S D +KIW + D + + L+ H+ + + W+P+ G + M+AS S D
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHD--LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFD 421
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
V +W + + + + V++V++S G L D V +W T GA
Sbjct: 422 STVRLWDVDRGICI--HTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT-GA 475
Score = 81 (33.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W + D+ I L H + V VA++P G +AS S D+ V I
Sbjct: 415 LASASFDSTVRLW--DVDRGICIHTLTKHQEPVYSVAFSPD-GR---YLASGSFDKCVHI 468
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T T +++++ ++ V W+ GD + S D SV
Sbjct: 469 WN-----TQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 71 (30.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SND 255
D I + K D+ I+ + H++ V + W P+ L +ASCS D + IW+ D
Sbjct: 328 DMCIHVCKLGQDRPIKT--FQGHTNEVNAIKWDPTGNL----LASCSDDMTLKIWSMKQD 381
Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTG--------DILTVSCG-DNSVSLW 295
+ + ++ + WS TG +++ S D++V LW
Sbjct: 382 NCVHD---LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 95 (38.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/113 (25%), Positives = 51/113 (45%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K +V+G D IK+W D ++T LE H++ V+ V + + + SC D +
Sbjct: 533 KLIVTGSGDKTIKVWSLL-DFSCKKT-LEGHTNSVQRVKF---FNREHPQLLSCGADGLI 587
Query: 249 IIWTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
+W DY ++ D +W + G+ T + D +S W +NT+
Sbjct: 588 KLW---DYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTE 637
Score = 85 (35.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH D+++ ++ G ++AT S D+ +++ + L+ + A +GH+G +
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEP-------FARFQGHAGAIT 431
Query: 71 QVAWAHPQFGT-LLASCSYDRKVIIWRGDN--GNWFKYYEYNN--HDSSVNSIAWAPKE 124
++ + Q L + S D + W+ N + K EY HD +NSI +P +
Sbjct: 432 AISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPND 490
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 95 (38.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/113 (25%), Positives = 51/113 (45%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K +V+G D IK+W D ++T LE H++ V+ V + + + SC D +
Sbjct: 533 KLIVTGSGDKTIKVWSLL-DFSCKKT-LEGHTNSVQRVKF---FNREHPQLLSCGADGLI 587
Query: 249 IIWTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
+W DY ++ D +W + G+ T + D +S W +NT+
Sbjct: 588 KLW---DYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTE 637
Score = 85 (35.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH D+++ ++ G ++AT S D+ +++ + L+ + A +GH+G +
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEP-------FARFQGHAGAIT 431
Query: 71 QVAWAHPQFGT-LLASCSYDRKVIIWRGDN--GNWFKYYEYNN--HDSSVNSIAWAPKE 124
++ + Q L + S D + W+ N + K EY HD +NSI +P +
Sbjct: 432 AISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPND 490
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 127 (49.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH++++ + + G ++ T S D +K++++ R++K+ +S +GH+ V
Sbjct: 131 GHKNIVQCVKWNQNGNWVLTASKDQIIKLYDI-RSMKELES----------FRGHNKDVT 179
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN-HDSSVNSIAWAPKEFGLIL 129
+AW HP S SYD + W G+ E NN HD+SV +AW P G +L
Sbjct: 180 ALAW-HPFHEEYFVSGSYDGAIFHWLV--GHETPQIEINNAHDNSVWDLAWHP--VGYLL 234
Query: 130 ACGSSDGTISF 140
G +D F
Sbjct: 235 CSGGNDHATRF 245
Score = 91 (37.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 31/111 (27%), Positives = 47/111 (42%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
T H + + D L +CS D TVKV++ R +++ S L GH V
Sbjct: 46 TAHRESVRDLSFCRTDLKFCSCSDDTTVKVWDFAR-CQEERS----------LTGHGWDV 94
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
V W HP +LL S D V +W +G + ++ H + V + W
Sbjct: 95 KSVDW-HPT-KSLLVSGGKDYLVKLWDAKSGRELR--SFHGHKNIVQCVKW 141
Score = 85 (35.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY 256
D +IK++ K +E + H+ V +AW P + S S D + W +
Sbjct: 154 DQIIKLYDIRSMKELESFR--GHNKDVTALAWHP---FHEEYFVSGSYDGAIFHWLVG-H 207
Query: 257 VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301
T I N D+ VW+++W G +L D++ W N G
Sbjct: 208 ETPQIEINNAHDNSVWDLAWHPVGYLLCSGGNDHATRFWCRNRPG 252
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 100 (40.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 32/109 (29%), Positives = 52/109 (47%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
LV+ D IK+W +++ L H+ WVR ++P L I SCS+D+ + I
Sbjct: 117 LVTASEDKSIKVWSMFRQRFLYS--LYRHTHWVRCAKFSPDGRL----IVSCSEDKTIKI 170
Query: 251 W-TSNDYVTWTPFIMNTFDDVVW--N-VSWSLTGDILTVSCGDNSVSLW 295
W T+N +N F D V N V ++ G + + D++V +W
Sbjct: 171 WDTTNKQC------VNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIW 213
Score = 98 (39.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+D++ + G LA+ S D TV+++ LDR K +E K H+ PV
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKS-----------SEFKAHTAPVR 106
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V ++ G LL + S D+ + +W F Y Y H V ++P + LI++
Sbjct: 107 SVDFSAD--GQLLVTASEDKSIKVWSMFRQR-FLYSLYR-HTHWVRCAKFSP-DGRLIVS 161
Query: 131 C 131
C
Sbjct: 162 C 162
Score = 76 (31.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S G D+ +KIW +K ++ ++ HS V +++ P L ++ + S ++
Sbjct: 201 IASAGSDHAVKIWDIRMNKLLQHYQV--HSCGVNCLSFHP---LGNSLVTASSDGTVKML 255
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
+ +T + V+ VS+S G++LT D V +W+ N
Sbjct: 256 DLIEGRLIYT---LQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTN 300
Score = 70 (29.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 26/105 (24%), Positives = 48/105 (45%)
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
KGH + ++ P + A+ S+D +++W + Y Y H V S+ ++P
Sbjct: 15 KGHKAAITSADFS-PNCKQI-ATASWDTFLMLW--SLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 123 KEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167
+ G +LA S D T+ ++ D +S + AHT +V +
Sbjct: 71 Q--GNLLASASRDRTVRL--WVLDRKG-KSSEFKAHTAPVRSVDF 110
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 130 (50.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 51/184 (27%), Positives = 79/184 (42%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C +D T++VF ++ G + E+K H
Sbjct: 611 LVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFK-----------AETGEKLLEIKAHE 659
Query: 67 GPVWQVAW-AHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
V A+ A +F +A+CS D+KV IW G + Y+ H VN +
Sbjct: 660 DEVLCCAFSADDKF---IATCSVDKKVKIWNSMTGELVRIYD--EHSEQVNCCHFTNNSN 714
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGS-K 183
L+LA GS+D + + D N E R + HT + + P L+ G+ K
Sbjct: 715 HLLLATGSND----YFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLK 770
Query: 184 LGGV 187
L V
Sbjct: 771 LWDV 774
Score = 51 (23.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/107 (20%), Positives = 41/107 (38%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
K L+S D+ ++IW + + + L+ H + V+D L + S S D V
Sbjct: 1018 KTLISSSDDSAVQIWNWQSE---DPFFLQAHQETVKDFRL-----LKNSRLLSWSFDGTV 1069
Query: 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W F+ + D V + S + + D + +W
Sbjct: 1070 KVWNIITRRIEKDFVCH--QDTVLSCDISSDATKFSSTSADKTAKIW 1114
Score = 43 (20.2 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 187 VAKRLVSGGCDN-LIKIWKQEGDKWIE-------ETKLENHSDWVRDVAWAP 230
V L++ G DN I+IW + + E H WV D+ ++P
Sbjct: 1139 VNNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSP 1190
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
N V ++ ++ G L S D++V +W
Sbjct: 1002 NGHKTTVRHIQFTADGKTLISSSDDSAVQIW 1032
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 94 (38.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GHED+I A+ D +A+CS D V V+N K K GH G V+
Sbjct: 45 GHEDIITCADFDPKMRQVASCSKDSIVYVWNF-----KPQQRPFK------FVGHKGAVY 93
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWR 96
V ++ P G +ASC DR++ +W+
Sbjct: 94 CVKYS-PD-GETIASCGQDRQIRLWQ 117
Score = 83 (34.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L+S D +K+W+ + K++ H +WVR +P L +AS S D+ V++
Sbjct: 146 LLSSSDDKTLKLWRLQDKKFM--CSFAGHKNWVRSGVISPDMRL----VASGSDDKTVML 199
Query: 251 WTSNDYVTWTPFIMNTFDDVV 271
W N + + +T DD V
Sbjct: 200 WDLNFQKIVSKY--STLDDNV 218
Score = 74 (31.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/123 (24%), Positives = 49/123 (39%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L+S D+ IKI +K I+ H V ++ P+ G +AS D K+ I
Sbjct: 245 LISSSFDHKIKITDIRSNKLIQHYNA--HDAQVNSISIHPT-GY---FLASAGSDSKIKI 298
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 310
W N D + V ++ +GD N +WK N D Q I ++
Sbjct: 299 WDLRQGRQIYTLYSNDKD--ITTVQFNQSGDYFATGGSQNLCMVWKTNFDQNIQNIEQVQ 356
Query: 311 KTS 313
+++
Sbjct: 357 RST 359
>TAIR|locus:2119141 [details] [associations]
symbol:CDC20.2 "AT4G33260" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 HOGENOM:HOG000195514
EMBL:AF029263 IPI:IPI00519553 PIR:T05977 RefSeq:NP_195052.1
UniGene:At.48930 ProteinModelPortal:Q9S7I8 SMR:Q9S7I8 STRING:Q9S7I8
EnsemblPlants:AT4G33260.1 GeneID:829462 KEGG:ath:AT4G33260
TAIR:At4g33260 InParanoid:Q9S7I8 OMA:AVALDNC PhylomeDB:Q9S7I8
ProtClustDB:CLSN2915879 ArrayExpress:Q9S7I8 Genevestigator:Q9S7I8
Uniprot:Q9S7I8
Length = 447
Score = 106 (42.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQE------GDKWIEETKLENHSDWVRDVAWAPSWGL 234
G K G ++L SGG DN++ IW + +W+ +LE H+ V+ +AW P +
Sbjct: 261 GLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLH--RLEEHTSAVKALAWCP-FQA 317
Query: 235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD--DVVWNVSWSLTGDILTVSCG--DN 290
+ DR + W T T +N+ D V ++ WS L S G N
Sbjct: 318 NLLATGGGGGDRTIKFWN-----THTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQN 372
Query: 291 SVSLWK 296
++LWK
Sbjct: 373 QLTLWK 378
Score = 66 (28.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/97 (25%), Positives = 40/97 (41%)
Query: 42 LDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN 101
LD + D+ + + + + GPV + WA P G +A + +V +W +
Sbjct: 148 LDHTVYLWDASTGSTSELVTIDEEKGPVTSINWA-PD-GRHVAVGLNNSEVQLWDSASNR 205
Query: 102 WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138
+ + H S V S+AW IL G DG I
Sbjct: 206 QLRTLK-GGHQSRVGSLAWNNH----ILTTGGMDGLI 237
Score = 53 (23.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 19/90 (21%), Positives = 34/90 (37%)
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D V +W G+ + + V SI WAP G +A G ++ + + S +N
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPD--GRHVAVGLNNSEVQL--WDSASN 204
Query: 149 SWESRKIAAHTIGCNAVSWGPGIGSLSELD 178
H +++W I + +D
Sbjct: 205 RQLRTLKGGHQSRVGSLAWNNHILTTGGMD 234
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 35/125 (28%), Positives = 61/125 (48%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G+ LA+CS D T+K++++ + + D + + +GP
Sbjct: 410 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGP-- 467
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
A ++P +LAS S+D V +W + G + H V S+A++P G LA
Sbjct: 468 --ATSNPNSNIMLASASFDSTVRLWDIERG--VCTHTLTKHQEPVYSVAFSPD--GKYLA 521
Query: 131 CGSSD 135
GS D
Sbjct: 522 SGSFD 526
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 44/162 (27%), Positives = 66/162 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL+ N + I E GH P
Sbjct: 230 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GGHDVPSN 288
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K
Sbjct: 289 KDVTSLDWNTN--GTLLATGSYDGFARIWTED-GNLAS--TLGQHKGPIFALKWNRKG-N 342
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 343 YILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 379
Score = 83 (34.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/111 (27%), Positives = 49/111 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-----SKCMIASCSQD 245
L S D +KIW + + I + L+ H+ + + W+P+ S M+AS S D
Sbjct: 427 LASCSDDMTLKIWSMKQEVCIHD--LQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFD 484
Query: 246 RKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W V T T + + V++V++S G L D V +W
Sbjct: 485 STVRLWDIERGVCTHT---LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 532
Score = 79 (32.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW 276
+ H++ V + W PS G+ ++ASCS D + IW+ V + + ++ + W
Sbjct: 409 QGHTNEVNAIKWDPS-GM---LLASCSDDMTLKIWSMKQEVCIHD--LQAHNKEIYTIKW 462
Query: 277 SLTG--------DILTVSCG-DNSVSLW 295
S TG +I+ S D++V LW
Sbjct: 463 SPTGPATSNPNSNIMLASASFDSTVRLW 490
Score = 73 (30.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/104 (26%), Positives = 49/104 (47%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W E + + L H + V VA++P K +AS S D+ V I
Sbjct: 478 LASASFDSTVRLWDIE--RGVCTHTLTKHQEPVYSVAFSPD---GK-YLASGSFDKCVHI 531
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T + +++++ ++ V W+ GD + S D SV
Sbjct: 532 WN-----TQSGNLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 570
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
LV+ D IK+W +++ L H+ WVR ++P L I SCS+D+ + I
Sbjct: 117 LVTASEDKSIKVWSMYRQRFLYS--LYRHTHWVRCAKFSPDGRL----IVSCSEDKTIKI 170
Query: 251 WTSNDYVTWTPFIMNTFDDVVW--N-VSWSLTGDILTVSCGDNSVSLW 295
W T + +N F D V N V +S G + + D++V +W
Sbjct: 171 WD-----TTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIW 213
Score = 93 (37.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH+D++ + G LA+ S D TV+++ LDR K +E K H+ PV
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKS-----------SEFKAHTAPVR 106
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
V ++ G L + S D+ + +W F Y Y H V ++P + LI++
Sbjct: 107 SVDFSAD--GQFLVTASEDKSIKVWSMYRQR-FLYSLYR-HTHWVRCAKFSP-DGRLIVS 161
Query: 131 C 131
C
Sbjct: 162 C 162
Score = 70 (29.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 26/105 (24%), Positives = 48/105 (45%)
Query: 63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
KGH + ++ P + A+ S+D +++W + Y Y H V S+ ++P
Sbjct: 15 KGHKAAITSADFS-PNCKQI-ATASWDTFLMLW--SLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 123 KEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167
+ G +LA S D T+ ++ D +S + AHT +V +
Sbjct: 71 Q--GNLLASASRDKTVRL--WVLDRKG-KSSEFKAHTAPVRSVDF 110
Score = 65 (27.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 24/106 (22%), Positives = 49/106 (46%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S G D+ ++IW ++ ++ ++ HS V +++ PS G S + AS K++
Sbjct: 201 IASAGSDHAVRIWDIRMNRLLQHYQV--HSCGVNCLSFHPS-GNS-LVTASSDGTVKILD 256
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
+ + + V+ VS+S G++ T D V +W+
Sbjct: 257 LVEGRLI----YTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWR 298
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 109 (43.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+GH ++ + WA LL S S D K+I+W D K + S V + A+A
Sbjct: 51 LRGHLAKIYAMHWATDS--KLLVSASQDGKLIVW--DTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 122 PKEFGLILACGSSDGTISFLTYMS-DTNSWESRKIAAHT 159
P G +ACG D S + S + N SR+++AHT
Sbjct: 107 PS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT 143
Score = 59 (25.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/105 (22%), Positives = 48/105 (45%)
Query: 192 VSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+SG CD K+W +EG +T + SD + + + P+ G + C + S D +
Sbjct: 200 ISGACDASAKLWDVREGT--CRQTFTGHESD-INAICFFPN-GEAIC---TGSDDASCRL 252
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+ T + + + +V++SL+G +L D + ++W
Sbjct: 253 FDLRADQELTTYAHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
>TAIR|locus:2119151 [details] [associations]
symbol:CDC20.1 "AT4G33270" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSN2915879 EMBL:BT026138 IPI:IPI00524152 PIR:T05978
RefSeq:NP_195053.1 UniGene:At.368 SMR:Q9SZA4 IntAct:Q9SZA4
STRING:Q9SZA4 EnsemblPlants:AT4G33270.1 GeneID:829463
KEGG:ath:AT4G33270 TAIR:At4g33270 InParanoid:Q9SZA4
Genevestigator:Q9SZA4 Uniprot:Q9SZA4
Length = 457
Score = 106 (42.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 181 GSKLGGVAKRLVSGGCDNLIKIWKQE------GDKWIEETKLENHSDWVRDVAWAPSWGL 234
G K G ++L SGG DN++ IW + +W+ +LE H+ V+ +AW P +
Sbjct: 271 GLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLH--RLEEHTSAVKALAWCP-FQA 327
Query: 235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD--DVVWNVSWSLTGDILTVSCG--DN 290
+ DR + W T T +N+ D V ++ WS L S G N
Sbjct: 328 NLLATGGGGGDRTIKFWN-----THTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQN 382
Query: 291 SVSLWK 296
++LWK
Sbjct: 383 QLTLWK 388
Score = 66 (28.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 25/97 (25%), Positives = 40/97 (41%)
Query: 42 LDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN 101
LD + D+ + + + + GPV + WA P G +A + +V +W +
Sbjct: 158 LDHTVYLWDASTGSTSELVTIDEEKGPVTSINWA-PD-GRHVAVGLNNSEVQLWDSASNR 215
Query: 102 WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138
+ + H S V S+AW IL G DG I
Sbjct: 216 QLRTLK-GGHQSRVGSLAWNNH----ILTTGGMDGLI 247
Score = 53 (23.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 19/90 (21%), Positives = 34/90 (37%)
Query: 89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
D V +W G+ + + V SI WAP G +A G ++ + + S +N
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPD--GRHVAVGLNNSEVQL--WDSASN 214
Query: 149 SWESRKIAAHTIGCNAVSWGPGIGSLSELD 178
H +++W I + +D
Sbjct: 215 RQLRTLKGGHQSRVGSLAWNNHILTTGGMD 244
>ZFIN|ZDB-GENE-020419-34 [details] [associations]
symbol:dtl "denticleless homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IMP] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISS] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 ZFIN:ZDB-GENE-020419-34 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0007095 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 CTD:51514 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH EMBL:AF506212 EMBL:BX511163
EMBL:BX510324 EMBL:BC045316 IPI:IPI00505024 RefSeq:NP_775348.1
UniGene:Dr.3526 ProteinModelPortal:Q5RHI5 STRING:Q5RHI5
Ensembl:ENSDART00000034098 GeneID:192314 KEGG:dre:192314
InParanoid:Q5RHI5 OMA:HENAVFD NextBio:20797151 Bgee:Q5RHI5
Uniprot:Q5RHI5
Length = 647
Score = 102 (41.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 27/64 (42%), Positives = 32/64 (50%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L SG D+ + IWK K L+ HS V VAW P+ +K IASCS D V I
Sbjct: 327 LASGSSDHNVYIWKISDPKQAP-MMLQGHSQEVTSVAWCPT-DFTK--IASCSDDNTVRI 382
Query: 251 WTSN 254
W N
Sbjct: 383 WRLN 386
Score = 74 (31.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 54 QKGTLIAELKGHSGPVWQVAWAHPQFGT-LLASCSYDRKVIIWRGDNGNWFKYYEYNNHD 112
++ +++ E + H V+ +AW P GT L + S D+ +W G+ ++ H
Sbjct: 85 KQSSVLKEWQAHDNAVFDIAWV-P--GTNCLVTASGDQTARLWDVITGDLLGTFK--GHQ 139
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTI 138
S+ S+A+ +E + + G DG I
Sbjct: 140 CSLKSVAFYKQEKA-VFSTGGRDGNI 164
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 128 (50.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 52/183 (28%), Positives = 76/183 (41%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C D T++VF ++ G + E+K H
Sbjct: 617 LVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFK-----------AETGEKLLEIKAHE 665
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V A++ +A+CS D+KV IW G + Y+ H VN +
Sbjct: 666 DEVLCCAFSTDD--RFIATCSVDKKVKIWNSMTGGLV--HVYDEHSEQVNCCHFTNNSHY 721
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGS-KL 184
L+LA SSD FL + D N E R + HT N + P L+ G+ KL
Sbjct: 722 LLLATASSD---CFLK-LWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKL 777
Query: 185 GGV 187
V
Sbjct: 778 WDV 780
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRD 225
K L+S D+ I++W + ++++ L+ H + V+D
Sbjct: 981 KTLISSSDDSSIQVWNWQSEEYVF---LQAHQETVKD 1014
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 35/125 (28%), Positives = 61/125 (48%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + ++ + D G+ LA+CS D T+K++++ + + D + + +GP
Sbjct: 402 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGP-- 459
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
A ++P +LAS S+D V +W + G + H V S+A++P G LA
Sbjct: 460 --ATSNPNSNIMLASASFDSTVRLWDIERG--VCTHTLTKHQEPVYSVAFSPD--GRYLA 513
Query: 131 CGSSD 135
GS D
Sbjct: 514 SGSFD 518
Score = 93 (37.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 44/162 (27%), Positives = 66/162 (40%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-- 68
GHE + + + LA+ S D T +++NL+ N + I E GH P
Sbjct: 222 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GGHDVPSN 280
Query: 69 --VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V + W GTLLA+ SYD IW D GN H + ++ W K
Sbjct: 281 KDVTSLDWNTN--GTLLATGSYDGFARIWTED-GNLAS--TLGQHKGPIFALKWNRKG-N 334
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSW 167
IL+ G TI + D ++ E+++ H+ V W
Sbjct: 335 YILSAGVDKTTIIW-----DAHTGEAKQQFPFHSAPALDVDW 371
Score = 82 (33.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/111 (27%), Positives = 49/111 (44%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-----SKCMIASCSQD 245
L S D +KIW + + I + L+ H+ + + W+P+ S M+AS S D
Sbjct: 419 LASCSDDMTLKIWSMKQEVCIHD--LQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFD 476
Query: 246 RKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
V +W V T T + + V++V++S G L D V +W
Sbjct: 477 STVRLWDIERGVCTHT---LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 524
Score = 79 (32.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW 276
+ H++ V + W PS G+ ++ASCS D + IW+ V + + ++ + W
Sbjct: 401 QGHTNEVNAIKWDPS-GM---LLASCSDDMTLKIWSMKQEVCIHD--LQAHNKEIYTIKW 454
Query: 277 SLTG--------DILTVSCG-DNSVSLW 295
S TG +I+ S D++V LW
Sbjct: 455 SPTGPATSNPNSNIMLASASFDSTVRLW 482
Score = 72 (30.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 28/104 (26%), Positives = 49/104 (47%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L S D+ +++W E + + L H + V VA++P G +AS S D+ V I
Sbjct: 470 LASASFDSTVRLWDIE--RGVCTHTLTKHQEPVYSVAFSPD-GR---YLASGSFDKCVHI 523
Query: 251 WTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCGDNSV 292
W T + +++++ ++ V W+ GD + S D SV
Sbjct: 524 WN-----TQSGNLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 562
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 128 (50.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 52/183 (28%), Positives = 76/183 (41%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
LV H D ++ A G +A+C D T++VF ++ G + E+K H
Sbjct: 617 LVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFK-----------AETGEKLLEIKAHE 665
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
V A++ +A+CS D+KV IW G + Y+ H VN +
Sbjct: 666 DEVLCCAFSTDD--RFIATCSVDKKVKIWNSMTGGLV--HVYDEHSEQVNCCHFTNNSHY 721
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGS-KL 184
L+LA SSD FL + D N E R + HT N + P L+ G+ KL
Sbjct: 722 LLLATASSD---CFLK-LWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKL 777
Query: 185 GGV 187
V
Sbjct: 778 WDV 780
Score = 52 (23.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRD 225
K L+S D+ I++W + ++++ L+ H + V+D
Sbjct: 1024 KTLISSSDDSSIQVWNWQSEEYVF---LQAHQETVKD 1057
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 63/236 (26%), Positives = 95/236 (40%)
Query: 47 KKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYY 106
++DD GT + L+GH GPV+ + G L SCS D + W D G++
Sbjct: 323 EEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLL--SCSEDMSIRYW--DLGSFTNTV 378
Query: 107 EYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS 166
Y H V + +P + L A GS D T ++ ++ R A H + V
Sbjct: 379 LYQGHAYPVWDLDISP--YSLYFASGSHDRTARLWSF---DRTYPLRIYAGHLADVDCVK 433
Query: 167 WGPG-----IGSLSE-LDL----KGSKL-------GGV--------AKRLVSGGCDNLIK 201
+ P GS + + L +G+ + G V K L S G D +K
Sbjct: 434 FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 493
Query: 202 IWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT-SNDY 256
+W +E L H+D + + ++P GL IAS S D V +W N Y
Sbjct: 494 LWDLASGTLYKE--LRGHTDNITSLTFSPDSGL----IASASMDNSVRVWDIRNTY 543
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 81/308 (26%), Positives = 126/308 (40%)
Query: 11 GHEDMIHDA---EMDYLGLYLATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKGH 65
GH D++ D + D L L T S D T+ ++ N +RN K H +GH
Sbjct: 138 GHTDVVKDVAWVKRDGLTSLLLTASLDQTILLWEWNSERN-KLKARHC--------CRGH 188
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
+G V +A P T S S+D+ + IW + + E S ++
Sbjct: 189 AGSVDTIA-TDPT-RTKFCSGSWDKMLKIW---SAVATEEEEEEEEPPSRPRKKQKTEQL 243
Query: 126 GL-----ILACGSSDGTISFLTYMSD---TNSWESRKIAAHTIGCNAVSWGPGIGSLSEL 177
GL + G ++ S L S+ + SW+ HTI W GS+ +
Sbjct: 244 GLTRTPLMTLSGHNEAVSSVLWLDSEEICSASWD------HTIRL----WDAETGSV-KT 292
Query: 178 DLKGSKL------GGVAKRLVSGGCDNLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAP 230
L GSK+ + +RL SG D +++W D + L +HS WV V WAP
Sbjct: 293 SLTGSKVFNHISYSPLCRRLASGSTDRHVRLWDPRSKDGSLVLLSLTSHSGWVTAVKWAP 352
Query: 231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCG- 288
S + + S S D V +W + P + ++ +D V V W T L +S G
Sbjct: 353 S---HEHQLVSGSLDNLVKLWDTRSCKA--PLYDVSAHEDKVLCVDW--TDSRLMLSGGA 405
Query: 289 DNSVSLWK 296
DN + ++
Sbjct: 406 DNKLYTYR 413
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 94 (38.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 41/168 (24%), Positives = 67/168 (39%)
Query: 8 VDTGHEDMIHDAE-MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
+ HE ++ A M +AT + V VF+ ++ K D + + L+GH
Sbjct: 118 IKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDL-RLRGHQ 176
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG-NWFKYYE----YNNHDSSVNSIAWA 121
+ ++W G LL S S D V +W G K + + H + V +AW
Sbjct: 177 KEGYGLSWNSNLSGHLL-SASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWH 235
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169
L + + D + S+T S S + AHT N +S+ P
Sbjct: 236 LLHESLFGSV-ADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 282
Score = 77 (32.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L +G D + +W K ++ E+H D + V W+P ++ ++AS DR++ +
Sbjct: 288 LATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVHWSPH---NETILASSGTDRRLNV 343
Query: 251 W 251
W
Sbjct: 344 W 344
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 132 (51.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 63/240 (26%), Positives = 96/240 (40%)
Query: 47 KKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYY 106
++++ GT + L+GH GPV+ + G L SCS D + W D G++
Sbjct: 323 EEENEEDNTGTEMKILRGHCGPVYSTRFLADSSGLL--SCSEDMSIRYW--DLGSFTNTV 378
Query: 107 EYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS 166
Y H V + +P F L A GS D T ++ ++ R A H + V
Sbjct: 379 LYQGHAYPVWDVDISP--FSLYFASGSHDRTARLWSF---DRTYPLRIYAGHLADVDCVK 433
Query: 167 WGPG-----IGSLSE-LDL----KGSKL-------GGV--------AKRLVSGGCDNLIK 201
+ P GS + + L +G+ + G V K L S G D +K
Sbjct: 434 FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLK 493
Query: 202 IWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTP 261
+W +E L H+D + +A++P GL IAS S D V +W TP
Sbjct: 494 LWDLASGTLFKE--LRGHTDSITSLAFSPDSGL----IASASMDNSVRVWDIRSTCCNTP 547
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVK 38
LNLV +G + + + G++L S ++
Sbjct: 105 LNLVQSGPKSTVESFYSRFHGMFLQNASQKDVIE 138
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGH +++ Y+A+ S D +VK++ + G +A L+GH GPV
Sbjct: 357 TGHMQLVNQVVFSPDTRYIASASFDKSVKLWC-----------GRTGKYLASLRGHVGPV 405
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
+QVAW+ LL S S D + ++ + YY+ H V ++ W+P+ G +
Sbjct: 406 YQVAWSADS--RLLVSGSADSTLKVFELKTKSL--YYDLPGHGDEVFTVDWSPE--GTKV 459
Query: 130 ACGSSD 135
G D
Sbjct: 460 VSGGKD 465
Score = 105 (42.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 42/163 (25%), Positives = 70/163 (42%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + + A+ G LA+ S D T+++++++ L H+ K H V
Sbjct: 103 GHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPL---HT--------CKSHKSWVL 151
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP--KE--FG 126
+AW+ P T +AS + ++ IW G H + S+AW P K+
Sbjct: 152 CIAWS-PD-ATKIASACKNGEICIWNAKTGEQIGK-TLKRHKQWITSLAWQPMHKDPTCR 208
Query: 127 LILACGSSDGTISFLTYMSDT-NSWESRKIAAHTIGCNAVSWG 168
L+ +CG DG I ++ DT R ++ HT + WG
Sbjct: 209 LLASCGK-DGNI----FIWDTVQGTVVRCLSGHTASVTCLRWG 246
Score = 66 (28.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 26/109 (23%), Positives = 45/109 (41%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA-SCSQDRKVI 249
+ S D +K+W K++ L H V VAW+ S+ +++ S KV
Sbjct: 375 IASASFDKSVKLWCGRTGKYL--ASLRGHVGPVYQVAWSAD---SRLLVSGSADSTLKVF 429
Query: 250 -IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297
+ T + Y + + D V+ V WS G + D + LW++
Sbjct: 430 ELKTKSLY-----YDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLWRQ 473
Score = 54 (24.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 190 RLVSGGCDNLIKIWKQ 205
++VSGG D ++K+W+Q
Sbjct: 458 KVVSGGKDKVLKLWRQ 473
>DICTYBASE|DDB_G0285601 [details] [associations]
symbol:cdc20 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
dictyBase:DDB_G0285601 GO:GO:0005634 GO:GO:0045335 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000079 eggNOG:COG2319 GO:GO:0016567 RefSeq:XP_638150.1
ProteinModelPortal:Q54MZ3 STRING:Q54MZ3 EnsemblProtists:DDB0237885
GeneID:8625198 KEGG:ddi:DDB_G0285601 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSZ2430186 Uniprot:Q54MZ3
Length = 499
Score = 111 (44.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 39/123 (31%), Positives = 55/123 (44%)
Query: 179 LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK-LENHSDWVRDVAWAPSWGLSKC 237
LK S GG +L SGG DN+I IW + + E H+ VR +AW P + +
Sbjct: 312 LKWSHDGG---QLASGGNDNIINIWDINSENFETPAHTFEQHTAAVRALAWCP-FQPNLL 367
Query: 238 MIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDV--VWNVSWSLTGDILTVSCG--DNSVS 293
+ DR + W T T +NT D + V ++ WS T L S G N +
Sbjct: 368 ATGGGAADRTIRFWN-----TITGVCLNTVDTMSQVCSIQWSTTYRELVSSHGYSQNQLC 422
Query: 294 LWK 296
+WK
Sbjct: 423 VWK 425
Score = 60 (26.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 21/87 (24%), Positives = 37/87 (42%)
Query: 92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE 151
V +W + ++ D + S+ W K+ G LA G++ TI L ++ T +
Sbjct: 203 VYLWNATTSEIQRLFQVEQQDDYITSLQWT-KD-GNYLAVGTNSCTIQ-LWDVAHTK--K 257
Query: 152 SRKIAAHTIGCNAVSWGPGIGSLSELD 178
R++ H A++W I S D
Sbjct: 258 VRELRGHAGRVGALAWNDYILSSGSSD 284
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 105 (42.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 41/139 (29%), Positives = 59/139 (42%)
Query: 41 NLDRNLKKDDSHSQKGTLIAELK---GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRG 97
NL+ + QK +E K GHSGPV+ +++ P LL SCS D +W
Sbjct: 651 NLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFS-PDSQYLL-SCSEDTTARLWSM 708
Query: 98 DNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-A 156
+ + Y H+ V ++++P FG A S D T T TN +I
Sbjct: 709 ETMS--NLVCYKGHNFPVWDVSFSP--FGFYFATASHDRTARLWT----TNHISPLRIFT 760
Query: 157 AHTIGCNAVSWGPGIGSLS 175
H CN V + P I L+
Sbjct: 761 GHLSDCNTVRFHPNINYLA 779
Score = 98 (39.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH ++ YL +CS D T ++++++ L+ KGH+ PVW
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMET----------MSNLVC-YKGHNFPVW 725
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
V+++ P FG A+ S+DR +W ++ + + + H S N++ + P
Sbjct: 726 DVSFS-P-FGFYFATASHDRTARLWTTNHISPLRIF--TGHLSDCNTVRFHP 773
Score = 73 (30.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 27/106 (25%), Positives = 46/106 (43%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L +G D ++W+ + K + H + VA++P L +A+ +D VI+
Sbjct: 778 LATGSNDKSARLWEIQTGKCVRI--FMGHRAPIYTVAFSPDGRL----LATAGEDTSVIL 831
Query: 251 WTSNDYVTWTPFI-MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
W D T M+ V+++ +S G IL D +V LW
Sbjct: 832 W---DLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLW 874
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 94 (38.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 41/168 (24%), Positives = 65/168 (38%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + + G YLA+ S D TV+ ++L + H KGH V
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFT-------CKGHRHWVL 160
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG---L 127
++W+ P G LAS + ++++W G H + ++W P
Sbjct: 161 SISWS-PD-GRKLASGCKNGQILLWDPSTGKQVGR-TLAGHSKWITGLSWEPLHANPECR 217
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSL 174
+A S DG++ DT + +I HT + WG G G L
Sbjct: 218 YVASSSKDGSVRIW----DTTAGRCERILTGHTQSVTCLRWG-GDGLL 260
Score = 78 (32.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
++ LVSG D+ +K+W + K + L H+D V V W+P G +AS +D+
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLAMD--LPGHADEVYAVDWSPD-GQR---VASGGKDKC 479
Query: 248 VIIW 251
+ IW
Sbjct: 480 LRIW 483
Score = 68 (29.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 25/108 (23%), Positives = 43/108 (39%)
Query: 190 RLV-SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
R+V S D IK+W K++ L H V +AW+ S+ +++ S D +
Sbjct: 385 RIVASASFDKSIKLWDGRTGKYL--ASLRGHVAAVYQIAWSAD---SRLLVSG-SSDSTL 438
Query: 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
+W + D V+ V WS G + D + +W+
Sbjct: 439 KVWDVK--AQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 89 (36.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 39/168 (23%), Positives = 66/168 (39%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
GH + + G YLA+ S D TV+ ++L + H +GH V
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFT-------CQGHRHWVL 161
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG---L 127
++W+ P G LAS + ++++W G H + +++W P
Sbjct: 162 SISWS-PD-GKKLASGCKNGQILLWDPSTGKQVGR-ALTGHSKWITALSWEPLHANPECR 218
Query: 128 ILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGIGSL 174
+A S DG++ + DT + R + H + WG G G L
Sbjct: 219 YVASSSKDGSVR----VWDTTAGRCERTLTGHAQSVTCLRWG-GDGLL 261
Score = 83 (34.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
++ LVSG D+ +K+W + K T L H+D V V W+P G +AS +D+
Sbjct: 427 SRLLVSGSSDSTLKVWDVKAQKL--STDLPGHADEVYAVDWSPD-GQR---VASGGKDKC 480
Query: 248 VIIW 251
+ IW
Sbjct: 481 LRIW 484
Score = 72 (30.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 24/106 (22%), Positives = 42/106 (39%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+ S D IK+W K++ L H V +AW+ S+ +++ S D + +
Sbjct: 388 IASASFDKSIKLWDGRTGKYL--ASLRGHVAAVYQIAWSAD---SRLLVSG-SSDSTLKV 441
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
W T + D V+ V WS G + D + +W+
Sbjct: 442 WDVKAQKLSTDLPGHA--DEVYAVDWSPDGQRVASGGKDKCLRIWR 485
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 93 (37.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 41/168 (24%), Positives = 67/168 (39%)
Query: 8 VDTGHEDMIHDAE-MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
+ HE ++ A M +AT + V VF+ ++ K D + + L+GH
Sbjct: 117 IKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDL-RLRGHQ 175
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG-NWFKYYE----YNNHDSSVNSIAWA 121
+ ++W G LL S S D V +W G K + + H + V +AW
Sbjct: 176 KEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWH 234
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169
L + + D + S+T S S + AHT N +S+ P
Sbjct: 235 LLHESLFGSV-ADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
Score = 77 (32.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
L +G D + +W K ++ E+H D + V W+P ++ ++AS DR++ +
Sbjct: 287 LATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVHWSPH---NETILASSGTDRRLNV 342
Query: 251 W 251
W
Sbjct: 343 W 343
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 66/290 (22%), Positives = 119/290 (41%)
Query: 25 GLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL 83
G YL A+ S D+TV+++N+ L+ TL+ L GH+ P+ V W + +
Sbjct: 238 GPYLLASGSKDNTVRIWNV--KLR---------TLLFTLSGHTAPITCVRWGGQNW---I 283
Query: 84 ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTY 143
S SYD+ + IW +G + H + VN ++ + + +L G+ D T
Sbjct: 284 YSSSYDKTIRIWDAKDGKCLHILK--GHAARVNHLSLSTEH---VLRSGAYDHTDFKPKS 338
Query: 144 MSDTNS-----WES------RKIAAHTIGCNAVSWGPGIGSLSELDLKG-SKLGGVAKRL 191
SD +E+ ++ + + + W P + + G K+ A
Sbjct: 339 FSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFS 398
Query: 192 VSGGC------DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
G C D+ +++W + K++ L H V AW+ S+ +++S SQD
Sbjct: 399 PDGRCIATASFDSSVRLWDGKTGKFL--ATLRGHVAAVYQCAWSTD---SRLLVSS-SQD 452
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+ +W F + +D V+ V WS G + D +V +W
Sbjct: 453 TTLKVWDVRSKKM--KFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 101 (40.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 43/164 (26%), Positives = 65/164 (39%)
Query: 11 GHEDMIHDAEMD-YLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
GH+ I A+ L T S D T ++++ D T IA +KGH+ V
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQ-----------TPIATMKGHTNWV 180
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW-----APKE 124
VAWA P +++A+ S D + W G+ H + ++ W AP
Sbjct: 181 SCVAWA-PD-ASIIATGSMDNTIRFWDPKKGSPIGD-ALRRHTKPIMALCWQPLHLAPDS 237
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG 168
+LA GS D T+ T + ++ HT V WG
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRTLLFT---LSGHTAPITCVRWG 278
Score = 70 (29.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
++ LVS D +K+W K + L H D V V W+P G +AS D+
Sbjct: 443 SRLLVSSSQDTTLKVWDVRSKKM--KFDLPGHEDQVFAVDWSPD-GQR---VASGGADKA 496
Query: 248 VIIWT 252
V IW+
Sbjct: 497 VRIWS 501
Score = 59 (25.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 239 IASCSQDRKVIIWTSNDYVTWTPFI-MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297
+ S S D ++I+W + P M+ VV + S+S G + + D+SV LW
Sbjct: 361 LVSASDDLQLILWDPQK--STKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG 418
Query: 298 NT 299
T
Sbjct: 419 KT 420
>SGD|S000000104 [details] [associations]
symbol:HIR1 "Subunit of the HIR complex" species:4932
"Saccharomyces cerevisiae" [GO:0000417 "HIR complex"
evidence=IDA;IPI] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IMP] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0000775 "chromosome,
centromeric region" evidence=IEA;IDA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IGI] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000104 GO:GO:0003714 GO:GO:0000775 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006357 GO:GO:0003682 GO:GO:0016568 EMBL:BK006936
GO:GO:0006368 EMBL:S47695 GO:GO:0006336 HOGENOM:HOG000208205
KO:K11293 OrthoDB:EOG4QRMC9 GO:GO:0000417 EMBL:L03838 EMBL:Z35769
PIR:S41218 RefSeq:NP_009545.2 ProteinModelPortal:P32479 SMR:P32479
DIP:DIP-2365N IntAct:P32479 MINT:MINT-707704 STRING:P32479
PaxDb:P32479 EnsemblFungi:YBL008W GeneID:852275 KEGG:sce:YBL008W
CYGD:YBL008w GeneTree:ENSGT00550000074919 OMA:WAPDSSI
NextBio:970890 Genevestigator:P32479 GermOnline:YBL008W
Uniprot:P32479
Length = 840
Score = 104 (41.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 34/125 (27%), Positives = 54/125 (43%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDS----HSQKG-TLIAELKGHSGPVWQVAWAHPQF 79
G YLA+ S D + ++ LD + H ++ T+ L H + + WA P
Sbjct: 91 GKYLASGSDDRILLIWALDEEQSSQPAFGSEHEREHWTVRKRLVAHDNDIQDICWA-PD- 148
Query: 80 GTLLASCSYDRKVIIWRGDNGNWF-KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138
++L + DR VI+W NG+ F K ++ H S V + + P A S D T+
Sbjct: 149 SSILVTVGLDRSVIVW---NGSTFEKLKRFDVHQSLVKGVVFDPAN--KYFATTSDDRTM 203
Query: 139 SFLTY 143
Y
Sbjct: 204 KIFRY 208
Score = 72 (30.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 238 MIASCSQDRKVIIW-TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
++A+ QD+ + +W TS F + + + ++SW+ G +L V+ D+S++L+K
Sbjct: 327 VVATAGQDKSLAVWSTSRPRPILVAF--DIANKSITDMSWNPDGSLLFVASLDSSITLFK 384
Query: 297 -ENTD 300
EN +
Sbjct: 385 FENNE 389
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 109 (43.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 33/99 (33%), Positives = 47/99 (47%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+GH ++ + WA LL S S D K+I+W N K + S V + A+A
Sbjct: 51 LRGHLAKIYAMHWATDS--KLLVSASQDGKLIVWDSYTTN--KVHAIPLRSSWVMTCAYA 106
Query: 122 PKEFGLILACGSSDGTISFLTYMS-DTNSWESRKIAAHT 159
P G +ACG D S S + N SR+++AHT
Sbjct: 107 PS--GNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHT 143
Score = 56 (24.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 23/105 (21%), Positives = 48/105 (45%)
Query: 192 VSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
+SG CD K+W +EG +T + SD + + + P+ G + C + + R +
Sbjct: 200 ISGACDASAKLWDVREGT--CRQTFTGHESD-INAICFFPN-GEAICTGSDDASCRLFDL 255
Query: 251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+ + F + + +V++SL+G +L D + ++W
Sbjct: 256 RADQELIC---FSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
WARNING: HSPs involving 232 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.436 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 318 318 0.00083 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 482
No. of states in DFA: 623 (66 KB)
Total size of DFA: 295 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.13u 0.11s 27.24t Elapsed: 00:00:02
Total cpu time: 27.20u 0.11s 27.31t Elapsed: 00:00:02
Start: Thu Aug 15 17:34:33 2013 End: Thu Aug 15 17:34:35 2013
WARNINGS ISSUED: 2