RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2762
(318 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 81.7 bits (200), Expect = 3e-18
Identities = 57/328 (17%), Positives = 102/328 (31%), Gaps = 65/328 (19%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GH + + + + S D T+KV++ + G LKGH+ V
Sbjct: 14 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE-----------TGDFERTLKGHTDSV 62
Query: 70 WQVAWAHPQF----------------------------------------GTLLASCSYD 89
+++ H G + S S D
Sbjct: 63 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 122
Query: 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS 149
+ + +W G + H V + G ++A S+D T+ +
Sbjct: 123 KTIKMWEVQTGYC--VKTFTGHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKECK 178
Query: 150 WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK 209
E R+ + + K G L+SG D IK+W
Sbjct: 179 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 238
Query: 210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IMNTFD 268
+ L H +WVR V + I SC+ D+ + +W DY +N +
Sbjct: 239 CL--MTLVGHDNWVRGVLFHSGGKF----ILSCADDKTLRVW---DYKNKRCMKTLNAHE 289
Query: 269 DVVWNVSWSLTGDILTVSCGDNSVSLWK 296
V ++ + T + D +V +W+
Sbjct: 290 HFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 49.4 bits (116), Expect = 2e-07
Identities = 41/282 (14%), Positives = 82/282 (29%), Gaps = 46/282 (16%)
Query: 55 KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS 114
+ L GH PV +V + HP +++ S S D + +W + G++ + H S
Sbjct: 6 RPPEKYALSGHRSPVTRVIF-HPV-FSVMVSASEDATIKVWDYETGDFER--TLKGHTDS 61
Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI-------------- 160
V I++ L + + ++
Sbjct: 62 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR 121
Query: 161 -GCNAVSWGPGIGSLSELDLKGSKLGGVA-----KRLVSGGCDNLIKIWKQEGDKWIEET 214
+ + + V + S D +++W +
Sbjct: 122 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK--A 179
Query: 215 KLENHSDWVRDVAWAP----------------SWGLSKCMIASCSQDRKVIIWTSNDYVT 258
+L H V ++WAP G + S S+D+ + +W D T
Sbjct: 180 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW---DVST 236
Query: 259 WTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
+ D+ V V + G + D ++ +W
Sbjct: 237 GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 278
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 74.1 bits (180), Expect = 2e-15
Identities = 34/314 (10%), Positives = 85/314 (27%), Gaps = 38/314 (12%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
H+ I + + +CS D +KV++ ++ + + H V
Sbjct: 12 AHDADIFS--VSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN--------HDSSVNSIAWAP 122
Q L+A+ S+ ++ +R + K + S ++ W
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129
Query: 123 KEFGL---ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
L L GT + + S + G++
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLE-------LQGTVESPMT 182
Query: 180 KGSKLGGVA----KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS 235
V + +G + ++I + + + + ++ + + +
Sbjct: 183 PSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 242
Query: 236 KCMIASCSQDRKVIIWTSNDYVTWT--------------PFIMNTFDDVVWNVSWSLTGD 281
++A T + V ++S++ +G+
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 302
Query: 282 ILTVSCGDNSVSLW 295
L + D + W
Sbjct: 303 TLCSAGWDGKLRFW 316
Score = 50.2 bits (118), Expect = 1e-07
Identities = 38/321 (11%), Positives = 79/321 (24%), Gaps = 56/321 (17%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWA---HPQFGT 81
+AT S + + + R + +K L+ + W + W
Sbjct: 79 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLL-DSDMKKHSFWALKWGASNDRLLSH 137
Query: 82 LLASCSYDRKVIIWR----------------GDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
L + IW+ S+ + +
Sbjct: 138 RLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG- 196
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG 185
++A G ++GT+ + + + N++ S L +
Sbjct: 197 --LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS 254
Query: 186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
L I HS WV +++ S + S D
Sbjct: 255 FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG----ETLCSAGWD 310
Query: 246 RKVIIW-------------------TSNDYVTWTPFIMNTFDDVVWNVSW---------- 276
K+ W D + + + V++V +
Sbjct: 311 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 370
Query: 277 SLTGDILTVSCGDNSVSLWKE 297
+ + L C D S+ ++E
Sbjct: 371 ADLNESLCCVCLDRSIRWFRE 391
Score = 49.9 bits (117), Expect = 1e-07
Identities = 35/272 (12%), Positives = 72/272 (26%), Gaps = 33/272 (12%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY---------NNHD 112
K H ++ V+ + SCS D + +W + + H
Sbjct: 10 GKAHDADIFSVSAC----NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65
Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT-------NSWESRKIAAHTIGCNAV 165
V ++A S G + F + + A+
Sbjct: 66 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL 125
Query: 166 SWGPGIGSLSELDLKGSKLGGVAK--RLVSGGCDNLIKIWKQEGDKWIEET--KLENHSD 221
WG L L + + G + ++ ++ T S
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185
Query: 222 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM----NTFDDVVWNVSWS 277
+ V + + +IA+ + V I + F + + +V +S
Sbjct: 186 FATSVDISE-----RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240
Query: 278 LTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
G +L ++ NS + I +
Sbjct: 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSL 272
Score = 29.8 bits (65), Expect = 0.49
Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 14/121 (11%)
Query: 3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
SQ +L + H + + G L + D ++ +++ + I L
Sbjct: 279 SQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV-----------KTKERITTL 327
Query: 63 KGHSGPVWQVAWA---HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIA 119
H + +L +D K + +G E SI
Sbjct: 328 NMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 387
Query: 120 W 120
W
Sbjct: 388 W 388
Score = 27.9 bits (60), Expect = 2.0
Identities = 15/115 (13%), Positives = 27/115 (23%), Gaps = 9/115 (7%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVF-----NLDRNLKKDDSHSQKGTLIAELKGHS 66
+ + I + G LA ++ + + HS
Sbjct: 230 NSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 289
Query: 67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
V + G L S +D K+ W + N H +
Sbjct: 290 SWVMS--LSFNDSGETLCSAGWDGKLRFWDVKTKE--RITTLNMHCDDIEIEEDI 340
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 67.9 bits (164), Expect = 2e-13
Identities = 40/189 (21%), Positives = 70/189 (37%), Gaps = 19/189 (10%)
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN-----HDSSVNSIAWAPKE 124
P G +A+ S DR V +W + G + + N H SV S+ +
Sbjct: 207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD- 265
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
G + GS D ++ + N +S+ + T + + S++
Sbjct: 266 -GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA--------T 316
Query: 185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP--SWGLSKCMIASC 242
+ ++SG D + W ++ + L+ H + V VA A S G + A+
Sbjct: 317 TQNDEYILSGSKDRGVLFWDKKSGNPL--LMLQGHRNSVISVAVANGSSLGPEYNVFATG 374
Query: 243 SQDRKVIIW 251
S D K IW
Sbjct: 375 SGDCKARIW 383
Score = 56.7 bits (135), Expect = 1e-09
Identities = 39/136 (28%), Positives = 53/136 (38%), Gaps = 9/136 (6%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDR-NLKKDDSHSQKGTLIAELKGHSGP 68
TGH+D ++ G + + S D +VK++NL N K D GT GH
Sbjct: 251 TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 310
Query: 69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF--- 125
V VA + S S DR V+ W +GN H +SV S+A A
Sbjct: 311 VLSVATTQN--DEYILSGSKDRGVLFWDKKSGN--PLLMLQGHRNSVISVAVANGSSLGP 366
Query: 126 -GLILACGSSDGTISF 140
+ A GS D
Sbjct: 367 EYNVFATGSGDCKARI 382
Score = 50.2 bits (118), Expect = 1e-07
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 15/89 (16%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H+D + Y+ + S D V ++ + G + L+GH V
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDK-----------KSGNPLLMLQGHRNSVIS 355
Query: 72 VAWAHPQF----GTLLASCSYDRKVIIWR 96
VA A+ + A+ S D K IW+
Sbjct: 356 VAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 48.6 bits (114), Expect = 4e-07
Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 45/307 (14%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKK-------DDSHSQKGTLIAELK 63
H ++ + G YLAT + T +V+ + + + +
Sbjct: 60 DHTSVVCCVKFSNDGEYLAT-GCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
+ V ++ G LA+ + DR + IW +N + + D +
Sbjct: 119 SSDLYIRSVCFSP--DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG- 175
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
G+ + D + + + G V+ PG G
Sbjct: 176 -------DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG----------- 217
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWI-----EETKLENHSDWVRDVAWAP------SW 232
K + +G D +++W E + E H D V V + S
Sbjct: 218 -----KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
L + + Q+ + D V +V+ + + + D V
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 332
Query: 293 SLWKENT 299
W + +
Sbjct: 333 LFWDKKS 339
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 65.1 bits (157), Expect = 1e-12
Identities = 42/261 (16%), Positives = 74/261 (28%), Gaps = 33/261 (12%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+GH ++ + W LL S S D K+IIW N + V + A+A
Sbjct: 51 LRGHLAKIYAMHWGTD--SRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS--WVMTCAYA 106
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELD--- 178
P + + +I L S D
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTC 166
Query: 179 --------------------LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN 218
+ L + VSG CD K+W +
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ--TFTG 224
Query: 219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL 278
H + + + P+ A+ S D ++ + + + +VS+S
Sbjct: 225 HESDINAICFFPN----GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280
Query: 279 TGDILTVSCGDNSVSLWKENT 299
+G +L D + ++W
Sbjct: 281 SGRLLLAGYDDFNCNVWDALK 301
Score = 63.6 bits (153), Expect = 4e-12
Identities = 25/192 (13%), Positives = 59/192 (30%), Gaps = 35/192 (18%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H + + + + D + K++++ +G GH +
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-----------EGMCRQTFTGHESDINA 231
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC 131
+ + P G A+ S D ++ Y ++N + S++++ G +L
Sbjct: 232 ICF-FPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS--GRLLLA 287
Query: 132 GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL 191
G D + + + +A H + + +
Sbjct: 288 GYDDFNCNVWDALKAD---RAGVLAGHDNRVSCLGVTDD-----------------GMAV 327
Query: 192 VSGGCDNLIKIW 203
+G D+ +KIW
Sbjct: 328 ATGSWDSFLKIW 339
Score = 54.0 bits (128), Expect = 8e-09
Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 15/129 (11%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
TGHE I+ G AT S D T ++F+L + + +
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN---------IICGI 273
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
V+++ G LL + D +W + + HD+ V+ + G+ +
Sbjct: 274 TSVSFSKS--GRLLLAGYDDFNCNVWDALKAD--RAGVLAGHDNRVSCLGVTDD--GMAV 327
Query: 130 ACGSSDGTI 138
A GS D +
Sbjct: 328 ATGSWDSFL 336
Score = 32.8 bits (73), Expect = 0.045
Identities = 27/219 (12%), Positives = 54/219 (24%), Gaps = 25/219 (11%)
Query: 111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI------AAHTIGCNA 164
H + + ++ W +L S DG + + A+ N
Sbjct: 54 HLAKIYAMHWGTD--SRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNY 111
Query: 165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-------------DKWI 211
V+ G S +LK + R ++G L + I
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171
Query: 212 EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDV 270
E + + S + S + D +W D +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW---DVREGMCRQTFTGHESD 228
Query: 271 VWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
+ + + G+ D + L+ D +
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD 267
Score = 32.0 bits (71), Expect = 0.076
Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 6/92 (6%)
Query: 216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVS 275
L H + + W L + S SQD K+IIW S T + V +
Sbjct: 51 LRGHLAKIYAMHWGTDSRL----LVSASQDGKLIIWDSYT--TNKVHAIPLRSSWVMTCA 104
Query: 276 WSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
++ +G+ + DN S++ T ++
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVS 136
Score = 29.3 bits (64), Expect = 0.58
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFN 41
GH++ + + G+ +AT S D +K++N
Sbjct: 309 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 61.8 bits (148), Expect = 2e-11
Identities = 41/281 (14%), Positives = 84/281 (29%), Gaps = 19/281 (6%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
+A C ++H V ++ K + ELK H+G V V WA +
Sbjct: 19 RTQIAICPNNHEVHIYEKS---------GNKWVQVHELKEHNGQVTGVDWAPD--SNRIV 67
Query: 85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
+C DR +W W + + + WAP E + GS +I +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 145 SDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWK 204
+D + K + + + + ++ + V W
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVE--ERPAPTPWG 185
Query: 205 QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM 264
+ + + WV V ++ + +A S D V + ++ +
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVCFSANG----SRVAWVSHDSTVCLADADKKMAVATLAS 241
Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
T + V++ ++ V ++ G
Sbjct: 242 ET--LPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSF 280
Score = 50.2 bits (118), Expect = 1e-07
Identities = 33/246 (13%), Positives = 64/246 (26%), Gaps = 8/246 (3%)
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
P+ AW T +A C + +V I+ W + +E H+ V + WAP
Sbjct: 6 LVEPISCHAWNK--DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD- 62
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
+ +D T T + + + +
Sbjct: 63 -SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121
Query: 185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
+ K K+ + +S + + + I +
Sbjct: 122 ----CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEE 177
Query: 245 DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304
W S F ++ V V +S G + D++V L + A
Sbjct: 178 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 237
Query: 305 CITEMG 310
+
Sbjct: 238 TLASET 243
Score = 36.4 bits (82), Expect = 0.004
Identities = 33/247 (13%), Positives = 61/247 (24%), Gaps = 37/247 (14%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHS-------QKGTLIAELKG 64
+ + + LA S D ++F+ ++ G L+ E
Sbjct: 140 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 199
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
G V V ++ + +A S+D V + D
Sbjct: 200 SCGWVHGVCFSANG--SRVAWVSHDSTVCLADADKKMAVATLASETLPLLA----VTFIT 253
Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
++A G + F +++S G V L+ +
Sbjct: 254 ESSLVAAGHDCFPVLF--------TYDSAAGKLSFGGRLDVPKQSSQRGLTARER----- 300
Query: 185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
NL K EG H + V ++ +
Sbjct: 301 -----------FQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGM 349
Query: 245 DRKVIIW 251
D + IW
Sbjct: 350 DGGMSIW 356
Score = 28.3 bits (61), Expect = 1.3
Identities = 40/292 (13%), Positives = 73/292 (25%), Gaps = 22/292 (7%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
H + + + TC +D V+ L K + +
Sbjct: 48 KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILR---------INRAA 98
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
V WA + + S S + + +N W + S+V S+ W P +L
Sbjct: 99 RCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV--LL 156
Query: 130 ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
A GS D + + E R S S + G
Sbjct: 157 AAGSCDFKCRI--FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 214
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
R+ D+ + + + + A ++ ++A+ V+
Sbjct: 215 RVAWVSHDSTVCLADADKKMAV------ATLASETLPLLAVTFITESSLVAAGHDCFPVL 268
Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301
+ + DV S D S G
Sbjct: 269 FTYDSAAGKLS---FGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG 317
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 58.7 bits (140), Expect = 2e-10
Identities = 39/298 (13%), Positives = 75/298 (25%), Gaps = 29/298 (9%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
GH+D + + + G + + S D+T+KV++ G + L GH+G V
Sbjct: 13 KGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSA-----------VTGKCLRTLVGHTGGV 60
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
W + + + + + +
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 130 ACGSSDGTI--------SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
G + + + + + +L +
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 180
Query: 182 SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241
L +VSG D I++W E I H + + + S
Sbjct: 181 YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--GHQSLTSGMELKDNI------LVS 232
Query: 242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
+ D V IW + + + S D +V LW T
Sbjct: 233 GNADSTVKIW-DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 289
Score = 53.7 bits (127), Expect = 8e-09
Identities = 45/269 (16%), Positives = 79/269 (29%), Gaps = 31/269 (11%)
Query: 55 KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS 114
+ LKGH V G + S S D + +W G + H
Sbjct: 5 ELKSPKVLKGHDDHVITCLQFC---GNRIVSGSDDNTLKVWSAVTGKCLR--TLVGHTGG 59
Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL 174
V S + + T + + + V G +L
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 175 SELDLKGSKLGGV--------------AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS 220
D++ + V +R+VSG D ++K+W E + + L+ H+
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL--HTLQGHT 177
Query: 221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG 280
+ V + + + S S D + +W V I L
Sbjct: 178 NRVYSLQFDGIH------VVSGSLDTSIRVW----DVETGNCIHTLTGHQSLTSGMELKD 227
Query: 281 DILTVSCGDNSVSLWKENTDGAWQCITEM 309
+IL D++V +W T Q +
Sbjct: 228 NILVSGNADSTVKIWDIKTGQCLQTLQGP 256
Score = 38.3 bits (87), Expect = 9e-04
Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 17/132 (12%)
Query: 21 MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
M+ L + ++D TVK++++
Sbjct: 223 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQ------------GPNKHQSAVTCLQFNK 270
Query: 81 TLLASCSYDRKVIIWRGDNGNW---FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT 137
+ + S D V +W G + E V I + L+ A GS +GT
Sbjct: 271 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT--KLVCAVGSRNGT 328
Query: 138 ISFLTYMSDTNS 149
+ D +
Sbjct: 329 EETKLLVLDFDV 340
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 55.6 bits (132), Expect = 2e-09
Identities = 28/298 (9%), Positives = 71/298 (23%), Gaps = 24/298 (8%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
H +++ + ++ T VKV+++ ++ + +
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDIS------HPGNKSPVSQLDCLNRDNYIR 101
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
G L + IW E + + ++A +P
Sbjct: 102 SCKLLPD--GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC 159
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS-------- 182
C + + L + ++ A I + G L
Sbjct: 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQ 219
Query: 183 --KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC--M 238
L + + + + + + + S + C
Sbjct: 220 QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW 279
Query: 239 IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
S +D + W + V + S+ + GD ++++
Sbjct: 280 FVSTGKDNLLNAW---RTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 28.6 bits (62), Expect = 1.1
Identities = 5/36 (13%), Positives = 13/36 (36%)
Query: 7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNL 42
+ + + ++ Y+ T S D V+ +
Sbjct: 300 IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 51.4 bits (121), Expect = 4e-08
Identities = 34/335 (10%), Positives = 86/335 (25%), Gaps = 64/335 (19%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
++ +D I D ++ L S D ++ V+ D ++ L+ L +
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQ-------AKNVDLLQSL-RYKH 57
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN----------------- 110
P+ + + + +++ F+ N
Sbjct: 58 PLLCCNF-IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLI 116
Query: 111 ----------------------------HDSSVNSIAWAPKEFGLILACGSSDGTISFLT 142
+++ V + + L G ++ + +
Sbjct: 117 AASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFR 176
Query: 143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI 202
+ + + + V+ P S G VA D+
Sbjct: 177 LPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC---SSIDGRVAVEFFDDQGDDYNSS 233
Query: 203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF 262
+ K N + V + ++P + + D + W + T
Sbjct: 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRH----KFLYTAGSDGIISCW---NLQTRKKI 286
Query: 263 IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297
+ V + + +IL ++ D++
Sbjct: 287 KNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAA 321
Score = 34.4 bits (77), Expect = 0.014
Identities = 27/156 (17%), Positives = 45/156 (28%), Gaps = 11/156 (7%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDS----HSQKGTLIAELKGHSG 67
+ A + A S D V V D +S + L + +
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
PV + ++ L + D + W K + ++ SV IA +
Sbjct: 253 PVNSIEFSPRHK--FLYTAGSDGIISCWNLQTRKKIKNFA-KFNEDSVVKIACSDN---- 305
Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN 163
IL +SD T + T + I N
Sbjct: 306 ILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYEN 341
Score = 27.9 bits (60), Expect = 1.6
Identities = 6/39 (15%), Positives = 18/39 (46%)
Query: 263 IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301
I D + ++ + +L ++ D S++++K +
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA 44
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 46.3 bits (108), Expect = 2e-06
Identities = 19/280 (6%), Positives = 60/280 (21%), Gaps = 28/280 (10%)
Query: 28 LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87
+ + +LD ++ ++ A + G + +
Sbjct: 55 YVLNNHYGDIYGIDLDTCKNTFHANLSSVP-----GEVGRSMYSFAISP--DGKEVYATV 107
Query: 88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT 147
+ + + P + L + DG++
Sbjct: 108 NPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYK 167
Query: 148 NSWESRKIAAHTIGCNAVS------------WGPGIGSLSELDLKGSKLGGVAKRLVSGG 195
++ K N + ++ + +
Sbjct: 168 MDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD 227
Query: 196 CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255
+ K + + ++ +P +R
Sbjct: 228 LLYGYLSVDLKTGKTHTQEF-ADLTELYFTGLRSPKDPN----QIYGVLNRLAKYDLKQR 282
Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+ + D + V++ GD L + N ++++
Sbjct: 283 KLIKAANL----DHTYYCVAFDKKGDKLYLGGTFNDLAVF 318
Score = 36.6 bits (83), Expect = 0.003
Identities = 24/290 (8%), Positives = 57/290 (19%), Gaps = 35/290 (12%)
Query: 27 YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLAS 85
Y+ + + + V ++ T+ P T
Sbjct: 10 YMIVTNYPNNLHVVDVA-----------SDTVYKSCVMPDKFGPGTAMM-APDNRTAYVL 57
Query: 86 CSYDRKVIIWRGDNGNWFKYYEYNN----HDSSVNSIAWAPKEFGLILACGSSDGTISFL 141
++ + D + ++ S+ S A +P + +
Sbjct: 58 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 117
Query: 142 TYMS------DTNSWESRKIAAHTIGCNAVSW------GPGIGSLSELDLKGSKLGGVAK 189
T K V G + ++ K G
Sbjct: 118 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTV 177
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
L + W ++ S + A+ +
Sbjct: 178 ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK----QDPATADLLYGYL 233
Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
T T + + + D + N ++ +
Sbjct: 234 SVDLKTGKTHTQEFADLTELYFTGLRSP--KDPNQIYGVLNRLAKYDLKQ 281
Score = 33.9 bits (76), Expect = 0.023
Identities = 8/132 (6%), Positives = 29/132 (21%), Gaps = 8/132 (6%)
Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
+ ++ N + + D + + AP ++ + +
Sbjct: 9 EYMIVTNYPNNLHVVDVASDTVYKSCVMP-DKFGPGTAMMAPD---NRTAYVLNNHYGDI 64
Query: 249 IIW----TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304
N + + +++ + S G + +
Sbjct: 65 YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRL 124
Query: 305 CITEMGKTSEQR 316
+ E +
Sbjct: 125 EVFSTADGLEAK 136
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 46.0 bits (107), Expect = 2e-06
Identities = 36/293 (12%), Positives = 81/293 (27%), Gaps = 39/293 (13%)
Query: 21 MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
+ Y + + D+T+K+++ L GH+G V + +
Sbjct: 21 LQYDDQKIVSGLRDNTIKIWDK-----------NTLECKRILTGHTGSVLCLQYDERVII 69
Query: 81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF 140
T + + + + E H N + + I + T
Sbjct: 70 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 129
Query: 141 LTYMSDTNSWESRKIAAHTIGCNAVSW-----------GPGIGSLSELDLKGSKLGGVAK 189
L + + + + S + +L+ + L +
Sbjct: 130 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR 189
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+VSG DN I++W E + + I S + D K+
Sbjct: 190 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--------KRIVSGAYDGKIK 241
Query: 250 IWTSNDYVTWTPF-------IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
+W + + V+ + + + S D+++ +W
Sbjct: 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIW 292
Score = 34.1 bits (76), Expect = 0.016
Identities = 24/258 (9%), Positives = 61/258 (23%), Gaps = 19/258 (7%)
Query: 59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI 118
I S V+ + + + S D + IW + + H SV +
Sbjct: 8 IHCRSETSKGVYCLQYD----DQKIVSGLRDNTIKIWDKNTLECKR--ILTGHTGSVLCL 61
Query: 119 AWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELD 178
+ + + + M +T + + S++ D
Sbjct: 62 QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121
Query: 179 LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD---------WVRDVAWA 229
+ + + LV + + + + +
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI 181
Query: 230 PSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 289
++ S S D + +W D + + + I++ D
Sbjct: 182 ACLQYRDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCIRFDNKRIVS-GAYD 237
Query: 290 NSVSLWKENTDGAWQCIT 307
+ +W +
Sbjct: 238 GKIKVWDLVAALDPRAPA 255
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 45.7 bits (106), Expect = 3e-06
Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 40/304 (13%)
Query: 25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-SGPVWQVAWAHPQFGTLL 83
+A ++ D K + + GH S V V ++ + L
Sbjct: 29 TNAIAYPCGKSAF--------VRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYL 80
Query: 84 ASCSYDRKVIIWRGDNGNWFKY------YEYNNHDSSVNSIAWAPKEFGLILACGSSDGT 137
S KVI+W E+ ++ I+W + L + D
Sbjct: 81 CSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNF 140
Query: 138 ISFLTYMSDTNS--------WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
F+++ S + + + +++ G +
Sbjct: 141 GVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT 200
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM----------- 238
G ++ G+ I S + +
Sbjct: 201 HHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSW 260
Query: 239 -----IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSV 292
A+ D + +W + ++ V TG+ +S D ++
Sbjct: 261 LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 320
Query: 293 SLWK 296
+ ++
Sbjct: 321 NFYE 324
Score = 37.2 bits (84), Expect = 0.002
Identities = 15/111 (13%), Positives = 32/111 (28%), Gaps = 7/111 (6%)
Query: 65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS-VNSIAWAPK 123
+++ P + C V + ++ H SS V ++ ++P
Sbjct: 16 QRNFTTHLSY-DPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI 74
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWE-----SRKIAAHTIGCNAVSWGP 169
+ L G G + + D S + + +SW
Sbjct: 75 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF 125
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 46.0 bits (107), Expect = 3e-06
Identities = 44/322 (13%), Positives = 98/322 (30%), Gaps = 50/322 (15%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
GH + + + Y+ T + D ++V++ + +L GH G V
Sbjct: 9 RGHMTSVITC-LQFEDNYVITGADDKMIRVYDS-----------INKKFLLQLSGHDGGV 56
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
W + +AH G +L S S DR V +W + + H+S+V + + +
Sbjct: 57 WALKYAH---GGILVSGSTDRTVRVWD--IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 111
Query: 130 ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP-------------------- 169
GS D T+ +++ + + + + + P
Sbjct: 112 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG 171
Query: 170 ------------GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE 217
+ ++++ G + + + D I LE
Sbjct: 172 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 231
Query: 218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS 277
N GL + D ++ ++ ++
Sbjct: 232 NGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291
Query: 278 LTGDILTVSCGDNSVSLWKENT 299
++ +IL VS +N +++ +
Sbjct: 292 VSDNIL-VSGSENQFNIYNLRS 312
Score = 40.6 bits (93), Expect = 1e-04
Identities = 28/203 (13%), Positives = 62/203 (30%), Gaps = 26/203 (12%)
Query: 62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
L+GH V + + + D+ + ++ N + + + HD V ++ +A
Sbjct: 8 LRGHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLL--QLSGHDGGVWALKYA 62
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
G IL GS+D T+ + + + V +
Sbjct: 63 H---GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI----------- 108
Query: 182 SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241
K +V+G DN + +WK + + + E+ V + +
Sbjct: 109 -------KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 161
Query: 242 CSQDRKVIIWTSNDYVTWTPFIM 264
S ++ ++
Sbjct: 162 ASVRTVSGHGNIVVSGSYDNTLI 184
Score = 36.0 bits (81), Expect = 0.005
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 6/62 (9%)
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
++ G +N I+ K + + +D + V + ++A+ +D +
Sbjct: 295 NILVSGSENQFNIYNLRSGKLVHAN-ILKDADQIWSVNFKGKT-----LVAAVEKDGQSF 348
Query: 250 IW 251
+
Sbjct: 349 LE 350
Score = 32.9 bits (73), Expect = 0.041
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 15/70 (21%)
Query: 27 YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQFGTLLAS 85
+ S++ ++NL + G L+ A + + +W V + TL+A+
Sbjct: 295 NILVSGSENQFNIYNL-----------RSGKLVHANILKDADQIWSVNFKG---KTLVAA 340
Query: 86 CSYDRKVIIW 95
D + +
Sbjct: 341 VEKDGQSFLE 350
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 44.2 bits (102), Expect = 1e-05
Identities = 33/290 (11%), Positives = 63/290 (21%), Gaps = 9/290 (3%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLD-----RNLKKDDSHSQKGTLIAELKGH 65
GH I G L + ++ + +++ R + G
Sbjct: 10 GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 69
Query: 66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
W G S + G + IA
Sbjct: 70 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 129
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG 185
+ + ++ A +
Sbjct: 130 LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSN 189
Query: 186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
A + + +I + H+ V V+W+P +A+ S D
Sbjct: 190 NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN----VRLATGSLD 245
Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
VI+W N I N L + + D+++ W
Sbjct: 246 NSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 40.4 bits (92), Expect = 1e-04
Identities = 32/272 (11%), Positives = 66/272 (24%), Gaps = 16/272 (5%)
Query: 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV 115
G++ GH+ + ++ + G L S + + W G + + + H + +
Sbjct: 2 GSIDQVRYGHNKAITALSSSAD--GKTLFSADAEGHINSWDISTGISNRVFP-DVHATMI 58
Query: 116 NSIAWAPKEFGLILAC------------GSSDGTISFLTYMSDTNSWESRKIAAHTIGCN 163
I K ++ G S +
Sbjct: 59 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 118
Query: 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWV 223
VA + K K + E +
Sbjct: 119 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178
Query: 224 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDIL 283
+ ++ + + + Q RKVI ++ + TF ++
Sbjct: 179 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR 238
Query: 284 TVSCG-DNSVSLWKENTDGAWQCITEMGKTSE 314
+ DNSV +W N I +
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMS 270
Score = 30.0 bits (65), Expect = 0.34
Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 11/85 (12%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H + + LAT S D++V V+N+++ +I + V
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK--------PSDHPIIIKGAHAMSSVNS 274
Query: 72 VAWAHPQFGTLLASCSYDRKVIIWR 96
V W + T + S D + W
Sbjct: 275 VIWLN---ETTIVSAGQDSNIKFWN 296
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 41.1 bits (94), Expect = 8e-05
Identities = 31/287 (10%), Positives = 87/287 (30%), Gaps = 11/287 (3%)
Query: 10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
+GH I ++ L + S D + ++ + +++ +
Sbjct: 10 SGHNKGITALTVNPL----ISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNSKAQEY 60
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
++W + + + + +N + ++ + S + +
Sbjct: 61 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN 120
Query: 130 ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
+ GS+ + + + + P S + + S+ A
Sbjct: 121 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
++ ++ + + +W T N W A + + ++A+ S D +
Sbjct: 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240
Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
I++ + +N D V N+ W +++ D + W
Sbjct: 241 IYSVKRPMKII-KALNAHKDGVNNLLWETPSTLVSSG-ADACIKRWN 285
Score = 36.1 bits (81), Expect = 0.004
Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 16/113 (14%)
Query: 55 KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS 114
++ + GH+ + + L S SYD +++ W + + +H +
Sbjct: 2 HDEVLKTISGHNKGITALTVNP------LISGSYDGRIMEWSSSSM-------HQDHSNL 48
Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167
+ S+ + + S D T+ + + +A+ G AV
Sbjct: 49 IVSLDNSK---AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLT 98
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 39.9 bits (91), Expect = 2e-04
Identities = 34/267 (12%), Positives = 62/267 (23%), Gaps = 29/267 (10%)
Query: 54 QKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS 113
T HS + G AS V IW
Sbjct: 46 GSLTDTEIYTEHSHQTTVAKTSP--SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSG 103
Query: 114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS 173
V I+W + + + + + T++ A + P
Sbjct: 104 PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRII 163
Query: 174 LSELDLKGSKLGGVAK------------------------RLVSGGCDNLIKIWKQEGDK 209
D + G +GG ++ +G K
Sbjct: 164 SGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 223
Query: 210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW-TSNDYVTWTPFIMNTFD 268
+ + +W IAS S D+ + IW + V T + +
Sbjct: 224 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIE 283
Query: 269 DVVWNVSWSLTGDILTVSCGDNSVSLW 295
D + W+ L + ++
Sbjct: 284 DQQLGIIWT--KQALVSISANGFINFV 308
Score = 34.5 bits (77), Expect = 0.013
Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 12/84 (14%)
Query: 12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
H + G +A+ S+D T+K++N+ + + + Q
Sbjct: 237 HSGSVFGLTWSPDGTKIASASADKTIKIWNV-----------ATLKVEKTIPVGTRIEDQ 285
Query: 72 VAWAHPQFGTLLASCSYDRKVIIW 95
L S S + +
Sbjct: 286 QLGIIWT-KQALVSISANGFINFV 308
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 37.5 bits (85), Expect = 0.002
Identities = 21/291 (7%), Positives = 63/291 (21%), Gaps = 26/291 (8%)
Query: 27 YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWA-HPQFGTLLAS 85
Y+ + + V + + K + + + P A+
Sbjct: 3 YILAPARPDKLVVIDTE-----------KMAVDKVITIADAGPTPMVPMVAPGGRIAYAT 51
Query: 86 CSYDRKVIIWRGDNGN---WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT 142
+ ++ G S+ A +P LA S +
Sbjct: 52 VNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK--TLAIYESPVRLELTH 109
Query: 143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI 202
+ + + D G ++ L++
Sbjct: 110 FEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVED 169
Query: 203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM------IASCSQDRKVIIWTSNDY 256
+ + + + + W + + + ++ D
Sbjct: 170 KPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM---DL 226
Query: 257 VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
T + V+ S ++ N + + + + + +
Sbjct: 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP 277
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 34.0 bits (76), Expect = 0.018
Identities = 13/119 (10%), Positives = 40/119 (33%), Gaps = 4/119 (3%)
Query: 192 VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
++ I +W + + T++ + V+ + +P + + + +V+ +
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPD---KRYLYVGVRPEFRVLAY 64
Query: 252 T-SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
+ D T + + ++S G + V + DG + ++
Sbjct: 65 RIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV 123
Score = 31.0 bits (68), Expect = 0.18
Identities = 29/273 (10%), Positives = 75/273 (27%), Gaps = 19/273 (6%)
Query: 30 TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89
+ V+NL+ + + ++ G V + P L +
Sbjct: 9 ASPESQQIHVWNLN---------HEGALTLTQVVDVPGQVQPMVV-SPDKRYLYVGVRPE 58
Query: 90 RKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN 148
+V+ +R + + + S+ I+ + G + GS + +T + D
Sbjct: 59 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQ--GQFVFVGSYNAGNVSVTRLEDGL 116
Query: 149 SWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD 208
+ GC++ + P +L LK + + D+ + + +
Sbjct: 117 PVGVVDVVEGLDGCHSANISPDNRTLWVPALK------QDRICLFTVSDDGHLVAQDPAE 170
Query: 209 KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD 268
E H + + +A + + P +
Sbjct: 171 VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 230
Query: 269 DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301
+ + ++++ + DG
Sbjct: 231 WAADIHITPDGRHLYACDRTASLITVFSVSEDG 263
Score = 27.1 bits (58), Expect = 2.6
Identities = 7/89 (7%), Positives = 26/89 (29%), Gaps = 1/89 (1%)
Query: 81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF 140
T+ + +++ +W ++ + + V + +P + + + +
Sbjct: 5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLA 63
Query: 141 LTYMSDTNSWESRKIAAHTIGCNAVSWGP 169
D + +A +S
Sbjct: 64 YRIAPDDGALTFAAESALPGSLTHISTDH 92
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 34.1 bits (76), Expect = 0.018
Identities = 16/230 (6%), Positives = 44/230 (19%), Gaps = 23/230 (10%)
Query: 70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
+ + + ++ + F N+HD + A L
Sbjct: 139 SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD-----SKNL 193
Query: 130 ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
S + + PG + ++L + A
Sbjct: 194 YYLSYRSLDPS------PDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS--EAG 245
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
+ + LE+ + ++
Sbjct: 246 EYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA----AYYQGAPEKGVLL 301
Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
+ + + ++ S + V D + +
Sbjct: 302 KYDVKTRKVTE------VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345
Score = 34.1 bits (76), Expect = 0.019
Identities = 3/90 (3%), Positives = 17/90 (18%), Gaps = 17/90 (18%)
Query: 11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
+ Y + +++ ++ +
Sbjct: 274 SSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT---------------RKVTEVKNNLT 318
Query: 71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNG 100
+ + + D K+ + +
Sbjct: 319 DLRLSAD--RKTVMVRKDDGKIYTFPLEKP 346
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 31.8 bits (70), Expect = 0.089
Identities = 26/278 (9%), Positives = 63/278 (22%), Gaps = 25/278 (8%)
Query: 30 TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD 89
S + V ++ + A + S P P + + ++
Sbjct: 7 ANSESDNISVIDVT-----------SNKVTATIPVGSNP-MGAVI-SPDGTKVYVANAHS 53
Query: 90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF--------- 140
V I N + V + + +A + +
Sbjct: 54 NDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK 113
Query: 141 LTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLI 200
+ + + + S V+ +
Sbjct: 114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVY 173
Query: 201 KIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT 260
+ +T + D V+ A ++ + + T + T T
Sbjct: 174 VANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233
Query: 261 PFIMNTFD--DVVWNVSWSLTGDILTVSC-GDNSVSLW 295
I ++ + G + V+ N+VS+
Sbjct: 234 NKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVI 271
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 31.8 bits (71), Expect = 0.10
Identities = 28/298 (9%), Positives = 63/298 (21%), Gaps = 37/298 (12%)
Query: 22 DYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT 81
D L+ T + + + D ++ + G
Sbjct: 29 DLPNLFSVTLRDAGQIALVDGD-----------SKKIVKVIDTGYAV-HISRM-SAS-GR 74
Query: 82 LLASCSYDRKVIIWRGDNGNWFKYYE---YNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138
L D ++ + K E S +S G+
Sbjct: 75 YLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGY--EDRYTIAGAYWPPQ 132
Query: 139 SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN 198
+ + T+ P + ++ + +
Sbjct: 133 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH--------PEFIVNVKET 184
Query: 199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPS-------WGLSKCMIASCSQDRKVIIW 251
+ D + ++ D W S S + S+DR++
Sbjct: 185 GKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSAL 244
Query: 252 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
N V + ++S + AW+ + E+
Sbjct: 245 VDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY---AWKKVAEL 299
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 29.9 bits (66), Expect = 0.31
Identities = 10/60 (16%), Positives = 18/60 (30%)
Query: 23 YLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL 82
G A + V D + ++ +G +IAE G +G +
Sbjct: 11 NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV 70
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 29.8 bits (65), Expect = 0.50
Identities = 20/140 (14%), Positives = 37/140 (26%), Gaps = 12/140 (8%)
Query: 9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRN-LKKDDSHSQKGTLIAELKGHSG 67
E +I+ L + + +L K + G
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249
Query: 68 PVWQVAWAHP--------QFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIA 119
QVA+ + R V++ G +E ++SI
Sbjct: 250 GWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---MGHEIDSIN 306
Query: 120 WAPKEFGLILACGSSDGTIS 139
+ E L+ A + D T+
Sbjct: 307 VSQDEKPLLYALSTGDKTLY 326
>d2yzca1 d.96.1.4 (A:11-141) Urate oxidase (uricase) {Arthrobacter
globiformis [TaxId: 1665]}
Length = 131
Score = 27.4 bits (61), Expect = 1.5
Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
Query: 272 WNVSWSLTGDILTV-SCGDNSV 292
NV+ L GD + GDN+
Sbjct: 32 LNVTSQLRGDFEAAHTAGDNAH 53
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 28.0 bits (61), Expect = 1.5
Identities = 11/138 (7%), Positives = 31/138 (22%), Gaps = 9/138 (6%)
Query: 8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
A+ +Y G+ + +S K + A+ +G
Sbjct: 206 CTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265
Query: 68 PVWQVAWAHPQFGTLLASCSYDRKVI------IWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
+Q+ ++ + + ++ ++I A
Sbjct: 266 --FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG-QTSGPISNGHDSDAIIAA 322
Query: 122 PKEFGLILACGSSDGTIS 139
A + +
Sbjct: 323 QDGASDNYANSAGTEVLD 340
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 27.6 bits (60), Expect = 1.7
Identities = 9/132 (6%), Positives = 24/132 (18%), Gaps = 32/132 (24%)
Query: 28 LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87
+ V+ + + K + W G +
Sbjct: 178 YLFTTYGGNVRSADFSGD---------KPAFGKPWSLLTDAERAEGWRP--GGMQQTAVQ 226
Query: 88 YDRKVIIWRGDNGN-------WFKYYEYNNHDSSV--------------NSIAWAPKEFG 126
+ G + + Y+ SI + +
Sbjct: 227 AKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVSIQVSEDDKP 286
Query: 127 LILACGSSDGTI 138
L ++ +
Sbjct: 287 LFYGLTATSDLV 298
>d1z72a1 a.132.1.3 (A:4-220) Putative transcriptional regulator
SP0716 (SPr0628) {Streptococcus pneumoniae [TaxId:
1313]}
Length = 217
Score = 26.7 bits (58), Expect = 3.2
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 56 GTLIAELKGHSGPVWQVAWAHP 77
G + EL S WQ A H
Sbjct: 8 GLTVGELLKSSQKDWQAAINHR 29
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.436
Gapped
Lambda K H
0.267 0.0420 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,281,014
Number of extensions: 58902
Number of successful extensions: 516
Number of sequences better than 10.0: 1
Number of HSP's gapped: 275
Number of HSP's successfully gapped: 114
Length of query: 318
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 233
Effective length of database: 1,240,546
Effective search space: 289047218
Effective search space used: 289047218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)