BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2768
(96 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ IF K++EE F +EV+L + VPSS GR+IGKGG+ V ELQ T + + +P
Sbjct: 481 AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPR 540
Query: 62 SFN---EEETNVHIVGSFFSVQETLKGCPNIVDQ 92
EE V I+G FF+ Q + IV Q
Sbjct: 541 DQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQ 574
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
T+ L +P+ VG IIGK G ++++L R G+ IK+
Sbjct: 422 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI 456
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 22/93 (23%)
Query: 5 LIFEKMREEGLFAGADEVRLT----IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLP 60
+I E M++E ADE +L ++++ + VGR+IGK G+N+++++ TG+ I +
Sbjct: 250 MILEIMQKE-----ADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITIS 304
Query: 61 NS-----FNEEETNVHIVGSFFSVQETLKGCPN 88
+ +N E T +V+ T++ C N
Sbjct: 305 SLQDLSIYNPERT--------ITVRGTIEACAN 329
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 8 EKMREEGLFAG----ADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+ RE+G G A ++ + ++VP+ VG IIGK G ++ + + T S + +
Sbjct: 167 HRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 222
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE F +EV+L + VP+S GR+IGKGG+ V ELQ T + + +P
Sbjct: 466 AQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 62 SFNEEETN---VHIVGSFFSVQETLKGCPNIVDQ 92
+E + V I+G F++ Q + +I+ Q
Sbjct: 526 DQTPDENDQVIVKIIGHFYASQMAQRKIRDILAQ 559
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 14 GLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIV 73
G A +V + + L+VP+ VG IIGK G +R + + T S I + + N
Sbjct: 186 GAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-----HRKENAGAA 240
Query: 74 GSFFSVQETLKGC 86
SV T +GC
Sbjct: 241 EKAISVHSTPEGC 253
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+++ +P+ VG IIGK GQ++++L R + IK+
Sbjct: 408 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI 441
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 5 LIFEKMREEGL-FAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+I E M +E ADEV L I + ++ VGR+IGK G+N++++++ T + I +
Sbjct: 259 MILEIMHKEAKDTKTADEVPLKI--LAHNNFVGRLIGKEGRNLKKVEQDTETKITI 312
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE F +EV+L + VP+S GR+IGKGG+ V ELQ T + + +P
Sbjct: 466 AQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 62 SFNEEETN---VHIVGSFFSVQETLKGCPNIVDQ 92
+E + V I+G F++ Q + +I+ Q
Sbjct: 526 DQTPDENDQVIVKIIGHFYASQMAQRKIRDILAQ 559
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 14 GLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIV 73
G A +V + + L+VP+ VG IIGK G +R + + T S I + + N
Sbjct: 186 GAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-----HRKENAGAA 240
Query: 74 GSFFSVQETLKGC 86
SV T +GC
Sbjct: 241 EKAISVHSTPEGC 253
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 14 GLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
G F A E + +++ +P+ VG IIGK GQ++++L R + IK+
Sbjct: 397 GSFMQAPEQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI 441
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 5 LIFEKMREEGL-FAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+I E M +E ADEV L I + ++ VGR+IGK G+N++++++ T + I +
Sbjct: 259 MILEIMHKEAKDTKTADEVPLKI--LAHNNFVGRLIGKEGRNLKKVEQDTETKITI 312
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE F +EV+L + VP+S GR+IGKGG+ V ELQ T + + +P
Sbjct: 466 AQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 62 SFNEEETN---VHIVGSFFSVQETLKGCPNIVDQ 92
+E + V I+G F++ Q + +I+ Q
Sbjct: 526 DQTPDENDQVIVKIIGHFYASQMAQRKIRDILAQ 559
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 14 GLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIV 73
G A V + + L+VP+ VG IIGK G +R + + T S I + + N
Sbjct: 186 GAPAKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-----HRKENAGAA 240
Query: 74 GSFFSVQETLKGC 86
SV T +GC
Sbjct: 241 EKAISVHSTPEGC 253
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+++ +P+ VG IIGK GQ++++L R + IK+
Sbjct: 408 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI 441
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 5 LIFEKMREEGL-FAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+I E M +E ADEV L I + ++ VGR+IGK G+N++++++ T + I +
Sbjct: 259 MILEIMHKEAKDTKTADEVPLKI--LAHNNFVGRLIGKEGRNLKKVEQDTETKITI 312
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ IF K++EE F +EV+L + VPSS GR+IGKGG+ V ELQ T + + +P
Sbjct: 445 AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPR 504
Query: 62 SFN---EEETNVHIVGSFFSVQ 80
EE V I+G FF+ Q
Sbjct: 505 DQTPDENEEVIVRIIGHFFASQ 526
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 22/91 (24%)
Query: 5 LIFEKMREEGLFAGADEVRLT----IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLP 60
+I E M++E ADE +L ++++ + VGR+IGK G+N+++++ TG+ I +
Sbjct: 257 MILEIMQKE-----ADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITIS 311
Query: 61 NS-----FNEEETNVHIVGSFFSVQETLKGC 86
+ +N E T +V+ T++ C
Sbjct: 312 SLQDLSIYNPERT--------ITVKGTVEAC 334
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+ L +P+ VG IIGK G ++++L R G+ IK+
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI 420
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 11 REEGLFAG----ADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
RE+G G A ++ + ++VP+ VG IIGK G ++ + + T S + +
Sbjct: 177 REQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 229
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ IF K++EE F +EV+L + VPSS GR+IGKGG+ V ELQ T + + +P
Sbjct: 488 AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPR 547
Query: 62 SFN---EEETNVHIVGSFFSVQ 80
EE V I+G FF+ Q
Sbjct: 548 DQTPDENEEVIVRIIGHFFASQ 569
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 22/91 (24%)
Query: 5 LIFEKMREEGLFAGADEVRLT----IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLP 60
+I E M++E ADE +L ++++ + VGR+IGK G+N+++++ TG+ I +
Sbjct: 257 MILEIMQKE-----ADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITIS 311
Query: 61 NS-----FNEEETNVHIVGSFFSVQETLKGC 86
+ +N E T +V+ T++ C
Sbjct: 312 SLQDLSIYNPERT--------ITVKGTVEAC 334
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+ L +P+ VG IIGK G ++++L R G+ IK+
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI 463
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 11 REEGLFAG----ADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
RE+G G A ++ + ++VP+ VG IIGK G ++ + + T S + +
Sbjct: 177 REQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 229
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE F +EV+L + VP+S GR+IGKGG+ V ELQ T + + +P
Sbjct: 465 AQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 524
Query: 62 SFNEEETN---VHIVGSFFSVQETLKGCPNIVDQ 92
+E V I+G F++ Q + +I+ Q
Sbjct: 525 DQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQ 558
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
T+ + +P+ VG IIGK GQ++++L R + IK+
Sbjct: 406 TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI 440
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 22 VRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIVGSFFSVQE 81
V + + L+VP+ VG IIGK G +R + + T S I + + N S+
Sbjct: 194 VDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-----HRKENAGAAEKAISIHS 248
Query: 82 TLKGC 86
T +GC
Sbjct: 249 TPEGC 253
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 5 LIFEKMREEGL-FAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+I E M++E ADEV L I + ++ VGR+IGK G+N++++++ T + I +
Sbjct: 259 MILEIMQKEAKDTKTADEVPLKI--LAHNNFVGRLIGKEGRNLKKVEQDTETKITI 312
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ IF K++EE F +EV+L + VPS GR+IGKGG+ V ELQ T + + +P
Sbjct: 469 AQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPR 528
Query: 62 SFNEEETN---VHIVGSFFSVQETLKGCPNIVDQ 92
+E + V I G F++ Q + I+ Q
Sbjct: 529 DQTPDENDQVVVKITGHFYASQLAQRKIQEIISQ 562
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
T+ L +P+ VG IIGK GQ++++L R G+ IK+
Sbjct: 410 TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI 444
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIVGSFFSVQETL 83
+ + L+VP+ VG IIGK G +R + + T S I + + N +V T
Sbjct: 195 VPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDI-----HRKENAGAAEKPITVHSTP 249
Query: 84 KGC 86
+GC
Sbjct: 250 EGC 252
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 6 IFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLP----- 60
I E M++E + E + ++++ ++ VGR+IGK G+N++++++ T + I +
Sbjct: 259 IMEIMQKEAIDTKITE-EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL 317
Query: 61 NSFNEEETNVHIVGSFFSVQETLKGC 86
+N E T +V+ TL C
Sbjct: 318 TLYNPERT--------ITVKGTLDAC 335
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE F +EV+L + VPS GR+IGKGG+ V ELQ T + + +P
Sbjct: 470 AQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 529
Query: 62 SFNEEETN---VHIVGSFFSVQ 80
+E + V I G F++ Q
Sbjct: 530 DQTPDENDQVVVKITGHFYACQ 551
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
T+ L +P+ VG IIGK GQ++++L R G+ IK+
Sbjct: 411 TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI 445
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIVGSFFSVQETLKG 85
+ ++VP+ VG IIGK G +R + + T S I + + N ++ T +G
Sbjct: 199 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI-----HRKENAGAAEKPITIHSTPEG 253
Query: 86 C 86
C
Sbjct: 254 C 254
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE F +EV+L + VPS GR+IGKGG+ V ELQ T + + +P
Sbjct: 478 AQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 537
Query: 62 SFNEEETN---VHIVGSFFSVQ 80
+E + V I G F++ Q
Sbjct: 538 DQTPDENDQVVVKITGHFYASQ 559
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
T+ L +P+ VG IIGK GQ++++L R G+ IK+
Sbjct: 419 TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI 453
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIVGSFFSVQETL 83
+ + ++VP+ VG IIGK G +R + + T S I + + N ++ T
Sbjct: 205 VPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI-----HRKENAGAAEKPITIHSTP 259
Query: 84 KGC 86
+GC
Sbjct: 260 EGC 262
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE F +EV+L + VPS GR+IGKGG+ V ELQ T + + +P
Sbjct: 479 AQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 538
Query: 62 SFNEEETN---VHIVGSFFSVQ 80
+E + V I G F++ Q
Sbjct: 539 DQTPDENDEVVVKITGHFYASQ 560
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
T+ L +P+ VG IIGK GQ++++L R G+ IK+
Sbjct: 420 TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI 454
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 21 EVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIVGSFFSVQ 80
+ + + ++VP+ VG IIGK G +R + + T S I + + N ++
Sbjct: 203 QTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI-----HRKENAGAAEKPITIH 257
Query: 81 ETLKGC 86
T +GC
Sbjct: 258 STPEGC 263
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE F +EV+L + V ++ GR+IGKGG+ V ELQ T + + +P
Sbjct: 468 AQGRIYGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPR 527
Query: 62 SFNEEETN---VHIVGSFFSVQETLKGCPNIVDQ 92
+E + V I+G F++ Q + +I+ Q
Sbjct: 528 EQTPDEHDQVIVKIIGHFYASQLAQRKIRDILTQ 561
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 18 GADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
GA E + T+ + +P+ VG +IGK GQ++++L R G+ IK+
Sbjct: 403 GASE-QETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKI 443
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 14 GLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIV 73
G+ + + + L+VP+ VG IIGK G +R + + T S I + + N
Sbjct: 189 GIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-----HRKENAGAA 243
Query: 74 GSFFSVQETLKGC 86
S+ T +GC
Sbjct: 244 EKPISIHSTPEGC 256
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 5 LIFEKMREEGL-FAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+I E M +E ADEV L + + ++ VGR+IGK G+N++++++ T + I +
Sbjct: 262 MILEIMNQEAKDTKTADEVPLKV--LAHNNFVGRLIGKEGRNLKKVEQDTDTKITI 315
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE + +EV+L + VPS GR+IGKGG+ V ELQ + + + +P
Sbjct: 466 AQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR 525
Query: 62 SFNEEETN---VHIVGSFFSVQ 80
+E + V I G F++ Q
Sbjct: 526 DQTPDENDQVVVKITGHFYACQ 547
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
T+ L +P+ VG IIGK GQ++++L R G+ IK+
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI 441
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMI 57
L + L+VP+ VG IIGK G +R + + T S I
Sbjct: 196 LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI 229
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 2 AQYLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
AQ I+ K++EE + +EV+L + VPS GR+IGKGG+ V ELQ + + + +P
Sbjct: 466 AQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPR 525
Query: 62 SFNEEETN---VHIVGSFFSVQETLKGCPNIVDQ 92
+E + V I G F++ Q + I+ Q
Sbjct: 526 DQTPDENDQVVVKITGHFYACQVAQRKIQEILTQ 559
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
T+ L +P+ VG IIGK GQ++++L R G+ IK+
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI 441
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMI 57
L + L+VP+ VG IIGK G +R + + T S I
Sbjct: 196 LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI 229
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 19 ADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF--NEEETNVHIVGSF 76
A +T+ LVVP++Q G +IGKGG ++E++ STG+ +++ N E + I G
Sbjct: 93 ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVP 152
Query: 77 FSVQETLK 84
SV E +K
Sbjct: 153 QSVTECVK 160
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 13 EGLFAGAD-EVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNV 70
+G +A D + T EL +P++ +G IIG+ G N+ E+++ +G+ IK+ N V
Sbjct: 268 KGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 71 HIVGSFFSV 79
I GS S+
Sbjct: 328 TITGSAASI 336
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 22 VRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
V LTI L++ +VG IIGK G++V+ ++ +G+ I +
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 19 ADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF--NEEETNVHIVGSF 76
A +T+ LVVP++Q G +IGKGG ++E++ STG+ +++ N E + I G
Sbjct: 93 ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVP 152
Query: 77 FSVQETLK 84
SV E +K
Sbjct: 153 QSVTECVK 160
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 13 EGLFAGAD-EVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNV 70
+G +A D + T EL +P++ +G IIG+ G N+ E+++ +G+ IK+ N V
Sbjct: 268 KGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 71 HIVGSFFSV 79
I GS S+
Sbjct: 328 TITGSAASI 336
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 22 VRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
V LTI L++ +VG IIGK G++V+ ++ +G+ I +
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 19 ADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF--NEEETNVHIVGSF 76
A +T+ LVVP++Q G +IGKGG ++E++ STG+ +++ N E + I G
Sbjct: 93 ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVP 152
Query: 77 FSVQETLK 84
SV E +K
Sbjct: 153 QSVTECVK 160
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 13 EGLFAGAD-EVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNV 70
+G +A D + T EL +P++ +G IIG+ G N+ E+++ +G+ IK+ N V
Sbjct: 268 KGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 71 HIVGSFFSV 79
I GS S+
Sbjct: 328 TITGSAASI 336
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 22 VRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
V LTI L++ +VG IIGK G++V+ ++ +G+ I +
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 19 ADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF--NEEETNVHIVGSF 76
A +T+ LVVP++Q G +IGKGG ++E++ STG+ +++ N E + I G
Sbjct: 93 ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVP 152
Query: 77 FSVQETLK 84
SV E +K
Sbjct: 153 QSVTECVK 160
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 13 EGLFAGAD-EVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNV 70
+G +A D + T EL +P++ +G IIG+ G N+ E+++ +G+ IK+ N V
Sbjct: 268 KGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 71 HIVGSFFSV 79
I GS S+
Sbjct: 328 TITGSAASI 336
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 22 VRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
V LTI L++ +VG IIGK G++V+ ++ +G+ I +
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 19 ADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF--NEEETNVHIVGSF 76
A +T+ LVVP+SQ G +IGKGG ++E++ STG+ +++ N E + I G
Sbjct: 93 ASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIP 152
Query: 77 FSVQETLK 84
S+ E +K
Sbjct: 153 QSIIECVK 160
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 13 EGLFAGADEVRLTI--ELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETN 69
+G +AG D T EL +P+ +G IIG+ G + E+++ +G+ IK+ N +
Sbjct: 272 KGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 331
Query: 70 VHIVGSFFSV 79
V I GS S+
Sbjct: 332 VTITGSAASI 341
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 12 EEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+ G+ G V LTI L++ +VG IIGK G++V++++ +G+ I +
Sbjct: 2 DTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 19 ADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF--NEEETNVHIVGSF 76
A +T+ LVVP+SQ G +IGKGG ++E++ STG+ +++ N E + I G
Sbjct: 93 ASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIP 152
Query: 77 FSVQETLK 84
S+ E +K
Sbjct: 153 QSIIECVK 160
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 12 EEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+ G+ G V LTI L++ +VG IIGK G++V++++ +G+ I +
Sbjct: 2 DTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGSFFSV 79
EL +P+ +G IIG+ G + E+++ +G+ IK+ N + V I GS S+
Sbjct: 291 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASI 344
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF--NEEETNVHIVGSFFSVQE 81
+T+ LVVP+SQ G +IGKGG ++E++ STG+ +++ N E V I G+ ++ +
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Query: 82 TLK 84
+K
Sbjct: 190 CVK 192
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 5 LIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
L F E + G V LTI L++ +VG IIGK G+ V++++ +G+ I +
Sbjct: 27 LHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 81
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGS 75
T EL +P+ +G IIG+ G + E+++ +G+ IK+ N+ E + I G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGT 346
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 8/66 (12%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIK-----LPNSFNEEETNVHIVGSFFS 78
+T+ LVVP+SQ G +IGKGG ++E++ STG+ ++ LPNS E V I G+ +
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNS---TERAVTISGTPDA 186
Query: 79 VQETLK 84
+ + +K
Sbjct: 187 IIQCVK 192
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 7 FEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
F + E + G V LTI L++ +VG IIGK G+ V++++ +G+ I +
Sbjct: 29 FGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 81
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGS 75
T EL +P+ +G IIG+ G + E+++ +G+ IK+ N+ E + I G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGT 346
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus
GN=Nova1 PE=2 SV=1
Length = 474
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNS 62
+++++PS G IIGKGGQ + +LQ+ TG+ IKL S
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 87
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL---PNSFNEEETNVHIVG 74
++++VP+S G IIGKGG V+ + +G+ ++L P+ N +E V + G
Sbjct: 149 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSG 200
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 20 DEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
D + +E+ VP + VG I+GKGG+ + E Q TG+ I++
Sbjct: 393 DGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 432
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNS 62
+++++PS G IIGKGGQ + +LQ+ TG+ IKL S
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL---PNSFNEEETNVHIVG 74
++++VP+S G IIGKGG V+ + +G+ ++L P+ N +E V + G
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSG 201
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 20 DEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
D + +E+ VP + VG I+GKGG+ + E Q TG+ I++
Sbjct: 394 DGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 433
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNS 62
+++++PS G IIGKGGQ + +LQ+ TG+ IKL S
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 71
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL---PNSFNEEETNVHIVG 74
+L+VP+S G IIGKGG V+ + +G+ ++L P N +E V + G
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSG 184
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 17/84 (20%)
Query: 4 YLIFEKMREEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIK----- 58
+L EK+ A+ + +E+ VP + VG I+GKGG+ + E Q TG+ I+
Sbjct: 394 FLTAEKL-------AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 446
Query: 59 --LPNSFNEEETNVHIVGSFFSVQ 80
LP + N V I GS + Q
Sbjct: 447 EFLPGTRNRR---VTITGSPAATQ 467
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNS 62
+++++PS G IIGKGGQ + +LQ+ TG+ IKL S
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL---PNSFNEEETNVHIVG 74
++++VP+S G IIGKGG V+ + +G+ ++L P+ N +E V + G
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSG 225
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 20 DEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
D + +E+ VP + VG I+GKGG+ + E Q TG+ I++
Sbjct: 418 DGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 457
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIK-----LPNS 62
+T+ LV+P+SQ G +IGK G ++E++ +TG+ ++ LPNS
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNS 145
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN-SFNEEETNVHIVGSFFSV 79
E +VP+ +G +IG+ G + E+++ +G+ IK+ N + E +V I GS S+
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSI 298
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIK-----LPNS 62
+T+ LV+P+SQ G +IGK G ++E++ +TG+ ++ LPNS
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNS 145
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN-SFNEEETNVHIVGSFFSV 79
E +VP+ +G +IG+ G + E+++ +G+ IK+ N + E +V I GS S+
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSI 298
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIK-----LPNS 62
+T+ LV+P+SQ G +IGK G ++E++ +TG+ ++ LPNS
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNS 145
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN-SFNEEETNVHIVGSFFSV 79
E +VP+ +G +IG+ G + E+++ +G+ IK+ N + E +V I GS S+
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSI 298
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+++++PS G IIGKGGQ + +LQ+ TG+ IKL
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL---PNSFNEEETNVHIVG 74
++++VP+S G IIGKGG V+ + +G+ ++L P+ N +E V + G
Sbjct: 177 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSG 228
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 20 DEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
D + +E+ VP + VG I+GKGG+ + E Q TG+ I++
Sbjct: 421 DGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 460
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL-PNSFNEEETNVHIVGSFFSVQET 82
+T E VP VG IIG+GG+ + ++Q+ +G +++ P+S E +V + G+ SVQ+
Sbjct: 146 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKA 205
Query: 83 LKGCPNIVDQ 92
+IV +
Sbjct: 206 KMMLDDIVSR 215
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNV----HIVGSFFSVQET 82
E+++P+ + G +IGKGG+ +++LQ G + L + TNV I+G + VQ+
Sbjct: 238 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD-GSQNTNVDKPLRIIGDPYKVQQ- 295
Query: 83 LKGCPNIVD 91
C ++D
Sbjct: 296 --ACEMVMD 302
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 23/30 (76%)
Query: 30 VPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+P+ + G +IG+GG+NV+ + + TG+ +++
Sbjct: 432 IPTHKCGLVIGRGGENVKAINQQTGAFVEI 461
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL-PNSFNEEETNVHIVGSFFSVQET 82
+T E VP VG IIG+GG+ + ++Q+ +G +++ P+S E +V + G+ SVQ+
Sbjct: 146 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKA 205
Query: 83 LKGCPNIVDQ 92
+IV +
Sbjct: 206 KMMLDDIVSR 215
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNV----HIVGSFFSVQET 82
E+++P+ + G +IGKGG+ +++LQ G + L + TNV I+G + VQ+
Sbjct: 238 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD-GSQNTNVDKPLRIIGDPYKVQQ- 295
Query: 83 LKGCPNIVD 91
C ++D
Sbjct: 296 --ACEMVMD 302
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 23/30 (76%)
Query: 30 VPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+P+ + G +IG+GG+NV+ + + TG+ +++
Sbjct: 432 IPTHKCGLVIGRGGENVKAINQQTGAFVEI 461
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL-PNSFNEEETNVHIVGSFFSVQET 82
+T E VP VG IIG+GG+ + ++Q+ +G +++ P+S E +V + G+ SVQ+
Sbjct: 145 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKA 204
Query: 83 LKGCPNIVDQ 92
+IV +
Sbjct: 205 KMMLDDIVSR 214
Score = 36.2 bits (82), Expect = 0.052, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNV----HIVGSFFSVQET 82
E+++P+ + G +IGKGG+ +++LQ G + L + TNV I+G + VQ+
Sbjct: 237 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD-GSQNTNVDKPLRIIGDPYKVQQ- 294
Query: 83 LKGCPNIVD 91
C ++D
Sbjct: 295 --ACEMVMD 301
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 23/30 (76%)
Query: 30 VPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+P+ + G +IG+GG+NV+ + + TG+ +++
Sbjct: 431 IPTHKCGLVIGRGGENVKAINQQTGAFVEI 460
>sp|O59810|VGL1_SCHPO Vigilin 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vgl1 PE=1 SV=2
Length = 1291
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 30 VPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEET-NVHIVGS 75
VP + IIG+ G R+++R T +M+ +PN + EET + IVGS
Sbjct: 1057 VPQRCISSIIGRMGSTRRDIERKTSTMLNIPNVLDPEETVTITIVGS 1103
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 15 LFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIVG 74
L+ + T + +PS V R++G+ G V ++ I + + EE T V + G
Sbjct: 886 LYEYEKSIAYTSTIDIPSKAVSRVVGRNGSTVENIRTQFDVKIDIGDVSTEETTPVSVRG 945
Query: 75 SFFSVQETLKGCPNIVDQ 92
+ V+ +K I ++
Sbjct: 946 AKADVENAIKEISAIAEE 963
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 23 RLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLP---NSFNE 65
R T + P VG IIG GQN++ + T + I++P N+ NE
Sbjct: 236 RETKTMPCPVFVVGAIIGTNGQNLKSIMDRTSTRIQIPKRNNTANE 281
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL-PNSFNEEETNVHIVGSFFSVQE 81
+T E VP VG IIG+GG+ + ++Q+ +G +++ P+S E +V + GS +VQ+
Sbjct: 209 VTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQK 267
Score = 35.8 bits (81), Expect = 0.072, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTG-SMIKLPNSFNEEETNV----HIVGSFFSVQE 81
E+++P+ + G +IGKGG+ +++LQ G MI + + + TNV I+G + VQ+
Sbjct: 300 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDG--SQNTNVDKPLRIIGDPYKVQQ 357
Query: 82 TLKGCPNIVD 91
C ++D
Sbjct: 358 ---ACEMVMD 364
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 22/30 (73%)
Query: 30 VPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+P+ + G +IG+GG+NV+ + + G+ +++
Sbjct: 493 IPTHKCGLVIGRGGENVKAINQQRGAFVEI 522
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 9/62 (14%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTG---SMIK---LPNSFNEEETNVHIVGSFFSVQ 80
E+++P+S+VG +IG+GG+ +++LQ TG MI+ LP ++ + I G F VQ
Sbjct: 166 EILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKP---LRITGDAFKVQ 222
Query: 81 ET 82
+
Sbjct: 223 QA 224
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 26 IELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL-----PNS 62
I VP+ + G +IGKGG+N++ + + +G+ ++L PNS
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNS 398
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN-SFNEEETNVHIVGSFFSVQET 82
+T E VP VG IIG+GG+ + +Q +G I++ + S E + G+ S+++
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 83 LKGCPNIVDQ 92
+ IVD+
Sbjct: 138 KRLLGQIVDR 147
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL-PNSFNEEETNVHIVGSFFSVQET 82
+T E VP VG IIG+GG+ + +Q+ +G I++ P+S E + + G+ SVQ
Sbjct: 97 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA 156
Query: 83 LKGCPNIVDQ 92
+ IV++
Sbjct: 157 KRLLDQIVEK 166
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTG---SMIKLPNSFNEEETNVHIVGSFFSVQE 81
E+++P+S+ G +IGKGG+ +++LQ G MI+ + + I G + VQ+
Sbjct: 185 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQ 242
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 28 LVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNS 62
+VP+ + G IIGKGG+ ++ + + +G+ I+L S
Sbjct: 377 FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRS 411
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 37.7 bits (86), Expect = 0.018, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL-PNSFNEEETNVHIVGSFFSVQET 82
+T E VP VG IIG+GG+ + +Q+ +G I++ P+S E + + G+ SVQ
Sbjct: 96 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA 155
Query: 83 LKGCPNIVDQ 92
+ IV++
Sbjct: 156 KRLLDQIVEK 165
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTG---SMIKLPNSFNEEETNVHIVGSFFSVQE 81
E+++P+S+ G +IGKGG+ +++LQ G MI+ + + I G + VQ+
Sbjct: 184 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQ 241
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 28 LVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+VP+ + G IIGKGG+ ++ + + +G+ I+L
Sbjct: 376 FIVPTGKTGLIIGKGGETIKSISQQSGARIEL 407
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 37.7 bits (86), Expect = 0.018, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL-PNSFNEEETNVHIVGSFFSVQET 82
+T E VP VG IIG+GG+ + +Q+ +G I++ P+S E + + G+ SVQ
Sbjct: 101 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA 160
Query: 83 LKGCPNIVDQ 92
+ IV++
Sbjct: 161 KRLLDQIVEK 170
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTG---SMIKLPNSFNEEETNVHIVGSFFSVQE 81
E+++P+S+ G +IGKGG+ +++LQ G MI+ + + I G + VQ+
Sbjct: 189 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQ 246
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 28 LVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
+VP+ + G IIGKGG+ ++ + + +G+ I+L
Sbjct: 381 FIVPTGKTGLIIGKGGETIKSISQQSGARIEL 412
>sp|Q8IWZ3|ANKH1_HUMAN Ankyrin repeat and KH domain-containing protein 1 OS=Homo sapiens
GN=ANKHD1 PE=1 SV=1
Length = 2542
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 11 REEGLFAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL 59
REEG + VR + +L VP+S V RI+G+GG N+ +Q TG+ I +
Sbjct: 1686 REEGW---KEVVRRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDV 1731
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGSFFSVQET 82
+T ++ +P G IIGKGGQ +++++ +G+ IK+ E+ + I G+ +Q
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 411
Query: 83 LKGCPNIVDQPS 94
N V Q S
Sbjct: 412 QYLLQNSVKQYS 423
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 8 EKMREEGLFAGADEVRLTIEL--VVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNE 65
E M EE F + +EL ++ S G +IGKGG+N++ L+ + + +P+S
Sbjct: 22 EDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP 81
Query: 66 E 66
E
Sbjct: 82 E 82
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGSFFSVQ 80
+T ++ +P G IIGKGGQ +++++ +G+ IK+ E+ + I G+ +Q
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQ 445
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 8 EKMREEGLFAGADEVRLTIEL--VVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNE 65
E M EE F + +EL ++ S G +IGKGG+N++ L+ + + +P+S
Sbjct: 25 EDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP 84
Query: 66 EETNVHIVGSFFSVQETLK 84
E + I ++ E LK
Sbjct: 85 ERI-LSISADIETIGEILK 102
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGSFFSVQ 80
+T ++ +P G IIGKGGQ +++++ +G+ IK+ E+ + I G+ +Q
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQ 445
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 8 EKMREEGLFAGADEVRLTIEL--VVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNE 65
E M EE F + +EL ++ S G +IGKGG+N++ L+ + + +P+S
Sbjct: 25 EDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP 84
Query: 66 EETNVHIVGSFFSVQETLK 84
E + I ++ E LK
Sbjct: 85 ERI-LSISADIETIGEILK 102
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGSFFSVQ 80
+T ++ +P G IIGKGGQ +++++ +G+ IK+ E+ + I G+ +Q
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQ 445
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 8 EKMREEGLFAGADEVRLTIEL--VVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNE 65
E M EE F + +EL ++ S G +IGKGG+N++ L+ + + +P+S
Sbjct: 25 EDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP 84
Query: 66 EETNVHIVGSFFSVQETLK 84
E + I ++ E LK
Sbjct: 85 ERI-LSISADIETIGEILK 102
>sp|P81021|VIGLN_CHICK Vigilin OS=Gallus gallus GN=HDLBP PE=2 SV=1
Length = 1270
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 33/47 (70%)
Query: 38 IIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIVGSFFSVQETLK 84
+IGKGG N+R+++ +TG+ I P S ++++ + I+G+ +V+E K
Sbjct: 742 LIGKGGGNIRKVRDNTGARIIFPTSEDKDQELITIMGTEEAVKEAQK 788
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 21 EVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPN 61
E ++TIE +P I+G G ++++ R G IK P+
Sbjct: 872 EAQVTIECTIPQKFHRSIMGPKGSRIQQITRDYGVQIKFPD 912
>sp|Q69XQ3|C3H44_ORYSJ Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa
subsp. japonica GN=Os06g0618100 PE=2 SV=1
Length = 295
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 25 TIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKL-PNSFNEEETNVHIVGSFFSVQ 80
T ++ V +S G IIGKGG N + + R TG+ + + N N N+ + G+F ++
Sbjct: 168 TAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIK 224
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 16 FAGADEVRLTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNEEETNVHIVGS 75
F G D++ IE+ VP V IIG+ G N+++L++ TG+ I + +E + I G
Sbjct: 47 FVGEDDIE--IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISG- 103
Query: 76 FFSVQ 80
F VQ
Sbjct: 104 -FPVQ 107
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 27 ELVVPSSQVGRIIGKGGQNVRELQRSTGSMI 57
+L VP VGRIIG+GG+ +R + +++G+ I
Sbjct: 128 QLSVPQRSVGRIIGRGGETIRSICKASGAKI 158
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGSFFSVQ 80
+T ++ +P G IIGKGGQ +++++ +G+ IK+ E+ + I G+ +Q
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQ 445
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 8 EKMREEGLFAGADEVRLTIEL--VVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNE 65
E M EE F + +EL ++ S G +IGKGG+N++ L+ + + +P+S
Sbjct: 25 EDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP 84
Query: 66 EETNVHIVGSFFSVQETLK 84
E + I ++ E LK
Sbjct: 85 ERI-LSISADIETIGEILK 102
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGSFFSVQ 80
+T ++ +P G IIGKGGQ +++++ +G+ IK+ E+ + I G+ +Q
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQ 445
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 8 EKMREEGLFAGADEVRLTIEL--VVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNE 65
E M EE F + +EL ++ S G +IGKGG+N++ L+ + + +P+S
Sbjct: 25 EDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP 84
Query: 66 EETNVHIVGSFFSVQETLK 84
E + I ++ E LK
Sbjct: 85 ERI-LSISADIETIGEILK 102
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 24 LTIELVVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSF-NEEETNVHIVGSFFSVQ 80
+T ++ +P G IIGKGGQ +++++ +G+ IK+ E+ + I G+ +Q
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQ 445
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 8 EKMREEGLFAGADEVRLTIEL--VVPSSQVGRIIGKGGQNVRELQRSTGSMIKLPNSFNE 65
E M EE F + +EL ++ S G +IGKGG+N++ L+ + + +P+S
Sbjct: 25 EDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP 84
Query: 66 EETNVHIVGSFFSVQETLK 84
E + I ++ E LK
Sbjct: 85 ERI-LSISADIETIGEILK 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,897,693
Number of Sequences: 539616
Number of extensions: 1352096
Number of successful extensions: 5269
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 4848
Number of HSP's gapped (non-prelim): 523
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)